BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021449
(312 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/320 (80%), Positives = 274/320 (85%), Gaps = 11/320 (3%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
M+E SLGR LH R +L+RWVP F SSHKTLFTVLW+AAFASVF+WQRN V GF+
Sbjct: 2 MLETASLGR--LHYQRLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQRNVVGDGFAVF 59
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
RP+P+LRP AFNLTDFGGVGDGVTLNTEAF+RAV AISKLGKKGGGQLNVPPGR
Sbjct: 60 FKASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGR 119
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
W+TAPFNLTSHMTLFLA+D+ IL IE+EKYWPLMPPLPSYGYGREH GPR+GS IHGQNL
Sbjct: 120 WVTAPFNLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNL 179
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVVITGHNGTINGQGQ WWKKYRQKLLN+TRGPLVQIMWSSDILI+NITLRDSPFWTLH
Sbjct: 180 KDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLH 239
Query: 241 PYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
PYDCKNVTIRN I L DSCEDMVIEDCYISVGDD IAIKSGWDQYGI
Sbjct: 240 PYDCKNVTIRNVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGI 299
Query: 292 AYGRPSMNILIRNLVVRSMV 311
AY RPS NILIRNLVVRSMV
Sbjct: 300 AYRRPSTNILIRNLVVRSMV 319
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/321 (78%), Positives = 277/321 (86%), Gaps = 13/321 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE S GRFH + +RPDL+RW+PAFLSSH+TLFT+LW+AAFASVF+WQRN V G +F
Sbjct: 1 MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
R +RP+PRLRPA +NLTDFGGVGD VT+NTEAF+RA+ AISKLGKKGGGQLNVP G
Sbjct: 61 R--APARPLPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGN 118
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSHMTLFL DA IL I++EKYWPLMPPLPSYGYGREH G R+GS IHGQNL
Sbjct: 119 WLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNL 178
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVVITGHNGTINGQGQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ISNITLRDSPFWTLH
Sbjct: 179 KDVVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLH 238
Query: 241 PYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
PYDCKNVTI+N I +F DSCEDMVIEDCYISVGDD IAIKSGWDQYG
Sbjct: 239 PYDCKNVTIKNVTILA-PIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYG 297
Query: 291 IAYGRPSMNILIRNLVVRSMV 311
+AYGRPS+NILIRNLV+RSMV
Sbjct: 298 VAYGRPSVNILIRNLVIRSMV 318
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/336 (74%), Positives = 276/336 (82%), Gaps = 27/336 (8%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE S GRFH + +RPDL+RW+PAFLSSH+TLFT+LW+AAFASVF+WQRN V G +F
Sbjct: 1 MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
R +RP+PRLRPA +NLTDFGGVGD VT+NTEAF+RA+ AISKLGKKGGGQLNVP G
Sbjct: 61 R--APARPLPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGN 118
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSHMTLFL DA IL I++EKYWPLMPPLPSYGYGREH G R+GS IHGQNL
Sbjct: 119 WLTAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNL 178
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVV+TGHNGTINGQGQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ISNITLRDSPFWTLH
Sbjct: 179 KDVVVTGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLH 238
Query: 241 PYDCKNVTIRNA-------------------------FISKIQLFDSCEDMVIEDCYISV 275
PYDCKNVTI+N + S +SCEDMVIEDCYISV
Sbjct: 239 PYDCKNVTIKNVTILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISV 298
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
GDD IAIKSGWDQYG+AYGRPS+NILIRNLV+RSMV
Sbjct: 299 GDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMV 334
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/321 (78%), Positives = 278/321 (86%), Gaps = 15/321 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE +LGRFH HQ R DLRRWVPAF +SHKTL T LW+AAFASVF+WQRN + GGF +
Sbjct: 1 MVENSTLGRFH-HQ-RLDLRRWVPAFFTSHKTLLTFLWIAAFASVFLWQRN-IAGGF-LV 56
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
G+ +RP+P LRP AFNLTDFGGVGDGVTLNTEAF+RAV A+SK GKKGG QLNVPPGR
Sbjct: 57 YGGIPARPMPMLRPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGR 116
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSHMTLFLA+DA IL I++EKYWPLMPPLPSYGYGREH GPR+GS IHGQ+L
Sbjct: 117 WLTAPFNLTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHL 176
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVVITGHNGTINGQGQ WWKKYRQK LN+TRGPLVQIM+SSDI+I+NITLRDSPFWTLH
Sbjct: 177 KDVVITGHNGTINGQGQTWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLH 236
Query: 241 PYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
PYDCKN+TI+ I +F DSCEDM+IEDCYISVGDDAIAIKSGWDQYG
Sbjct: 237 PYDCKNITIKGVTILA-PVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYG 295
Query: 291 IAYGRPSMNILIRNLVVRSMV 311
IAYGRPSMNI+IRNLVVRSMV
Sbjct: 296 IAYGRPSMNIMIRNLVVRSMV 316
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/321 (77%), Positives = 276/321 (85%), Gaps = 15/321 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE +LG H H R DLRRWVPAF +SHKTL T+LW+AAFASVF+WQRN +VGGF +
Sbjct: 2 MVETSTLG--HFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRN-IVGGF-LV 57
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
G+ RP+P LRP AFNLTDFGGVGDGVTLNTEAF+RAV A+SK GKKGG QLNVPPGR
Sbjct: 58 YGGIPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGR 117
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSHMTLFLA+DA IL I++EKYWPLMPPLPSYGYGREH GPR+GS IHGQ+L
Sbjct: 118 WLTAPFNLTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHL 177
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVVITGHNGTINGQGQ+WWKKYRQK LN+TRGPLVQIM+SSDI+I+NITLRDSPFWT+H
Sbjct: 178 KDVVITGHNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIH 237
Query: 241 PYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
PYDCKN+TI+ I +F DSCEDM+IEDCYISVGDDAIA+KSGWDQYG
Sbjct: 238 PYDCKNITIKGVTILA-PVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYG 296
Query: 291 IAYGRPSMNILIRNLVVRSMV 311
I YGRPSMNI+IRNLVVRSMV
Sbjct: 297 IDYGRPSMNIMIRNLVVRSMV 317
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/324 (77%), Positives = 274/324 (84%), Gaps = 17/324 (5%)
Query: 1 MVEILS---LGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGF 57
MVE ++ RF+ R DL+R VPAFLSSHK LFT+LW+AAFASVF+WQRNAV GGF
Sbjct: 1 MVETIASPLASRFNYQ--RLDLKRCVPAFLSSHKILFTLLWIAAFASVFLWQRNAVRGGF 58
Query: 58 SFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
+ W RPIP+LRP AFNLTDFG VGDGVTLNTEAF+RAV AISKL ++GGGQLNVP
Sbjct: 59 AAF-WHGPVRPIPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVP 117
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG+WLTAPFNLTSHMTLFLA+DA IL I++E YWPLMPPLPSYGYGREH GPR+GS IHG
Sbjct: 118 PGKWLTAPFNLTSHMTLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHG 177
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFW 237
QNL+D+VITGHNGTI+GQGQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ NITLR+SPFW
Sbjct: 178 QNLRDIVITGHNGTIDGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFW 237
Query: 238 TLHPYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWD 287
TLHPYDCKNVTIRN I +F DSCEDMVIEDCYISVGDDAIAIKSGWD
Sbjct: 238 TLHPYDCKNVTIRNVTILA-PIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWD 296
Query: 288 QYGIAYGRPSMNILIRNLVVRSMV 311
QYGIAYGRPS NILIRNLVVRSMV
Sbjct: 297 QYGIAYGRPSTNILIRNLVVRSMV 320
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/316 (76%), Positives = 271/316 (85%), Gaps = 15/316 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE +LG H H R DLRRWVPAF +SHKTL T+LW+AAFASVF+WQRN +VGGF +
Sbjct: 2 MVETSTLG--HFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRN-IVGGF-LV 57
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
G+ RP+P LRP AFNLTDFGGVGDGVTLNTEAF+RAV A+SK GKKGG QLNVPPGR
Sbjct: 58 YGGIPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGR 117
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSHMTLFLA+DA IL I++EKYWPLMPPLPSYGYGREH GPR+GS IHGQ+L
Sbjct: 118 WLTAPFNLTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHL 177
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
KDVVITGHNGTINGQGQ+WWKKYRQK LN+TRGPLVQIM+SSDI+I+NITLRDSPFWT+H
Sbjct: 178 KDVVITGHNGTINGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIH 237
Query: 241 PYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
PYDCKN+TI+ I +F DSCEDM+IEDCYISVGDDAIA+KSGWDQYG
Sbjct: 238 PYDCKNITIKGVTILA-PVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYG 296
Query: 291 IAYGRPSMNILIRNLV 306
I YGRPSMNI+IRNLV
Sbjct: 297 IDYGRPSMNIMIRNLV 312
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/307 (77%), Positives = 262/307 (85%), Gaps = 12/307 (3%)
Query: 15 NRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRP 74
R +L+R +PAFLSSHKTLF +LW+AAFASVF+W+RN V G + W RP+P+LRP
Sbjct: 16 KRLELKRCLPAFLSSHKTLFALLWIAAFASVFLWKRNPVGAGLAVF-WRGPLRPMPQLRP 74
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
AFNLTDFG VGDG T+NTEAF+RAV AISKL K+GGGQLNVPPGRWLTAPFNLTSHMTL
Sbjct: 75 VAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHMTL 134
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
FLA+ A IL I++EKYWPLMP LPSYGYGREH GPR+GS IHGQNL+DVVITGHNGTI+G
Sbjct: 135 FLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIDG 194
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QGQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ +NITLRDSPFWTLHPYDCKNVTIRN I
Sbjct: 195 QGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNVTI 254
Query: 255 SKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+F DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS NILIRN
Sbjct: 255 LA-PIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRN 313
Query: 305 LVVRSMV 311
LVVRSMV
Sbjct: 314 LVVRSMV 320
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/331 (70%), Positives = 265/331 (80%), Gaps = 20/331 (6%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVV------ 54
M E L RF H R D +R + +FL+SHKTLFT LW+ AF SVF+WQR A +
Sbjct: 1 MFENLLPSRFQFHLQRLDPKRRLTSFLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGA 60
Query: 55 ----GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGK-K 109
G F+ +P+PRLRP F+L DFGGVGDGVTLNTEAF+RAV +ISKL +
Sbjct: 61 GPIGGKFTIFGKIKPIQPLPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLERNS 120
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGGQLNVPPGRWLTAPFNLTSHMTLFLA+D+EIL +E+EKYWPLMPPLPSYGYGREH GP
Sbjct: 121 GGGQLNVPPGRWLTAPFNLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGREHPGP 180
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNI 229
R+GS IHGQNLKD+VITGHNGTINGQGQ+WWKKY+++LLN TRGPLVQIMWSSDI+I+NI
Sbjct: 181 RYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKYQRRLLNYTRGPLVQIMWSSDIVIANI 240
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAI 280
T+RDSPFWTLHPYDCKNVTIRN I + DSCEDMVIEDCYIS GDDAI
Sbjct: 241 TMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAI 300
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
AIKSGWDQ+GIAYGRPS NILIRNLVVRS++
Sbjct: 301 AIKSGWDQFGIAYGRPSTNILIRNLVVRSVI 331
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/320 (71%), Positives = 264/320 (82%), Gaps = 12/320 (3%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE G + R DL+R VPAF S+++T+FTV W+AA A++F+WQ + + GF FL
Sbjct: 2 MVETSIFG-VRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQ-STIGDGFFFL 59
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
+ G A RP+PRLRPA FNLTDFG VGDGVTLNT+AF++A+ AISKL KGGGQLNVP GR
Sbjct: 60 QRGSA-RPLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGR 118
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSH+TLFL + A IL I++EKYWPLMPPLPSYGYGREH GPR+GS IHGQNL
Sbjct: 119 WLTAPFNLTSHLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNL 178
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
+DVVITGHNGTI+GQG+ WWKKYRQKLLN+TRGPLVQIMWS DILISNITLRDSPFWTLH
Sbjct: 179 RDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLH 238
Query: 241 PYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
PYDCKN+TIRN I + DSCEDM+IEDCYISVGDD IAIKSGWDQYGI
Sbjct: 239 PYDCKNITIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGI 298
Query: 292 AYGRPSMNILIRNLVVRSMV 311
AYG+PS NI IRN+V++SMV
Sbjct: 299 AYGQPSKNIRIRNVVLQSMV 318
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/320 (71%), Positives = 264/320 (82%), Gaps = 12/320 (3%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE G + R DL+R VPAF S+++T+FTV W+AA A++F+WQ + + GF FL
Sbjct: 2 MVETSIFG-VRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQ-STIGDGFFFL 59
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
+ G A RP+PRLRPA FNLTDFG VGDGVTLNT+AF++A+ AISKL KGGGQLNVP GR
Sbjct: 60 QRGSA-RPLPRLRPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGR 118
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLTAPFNLTSH+TLFL + A IL I++EKYWPLMPPLPSYGYGREH GPR+GS IHGQNL
Sbjct: 119 WLTAPFNLTSHLTLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNL 178
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
+DVVITGHNGTI+GQG+ WWKKYRQKLLN+TRGPLVQIMWS DILISNITLRDSPFWTLH
Sbjct: 179 RDVVITGHNGTISGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLH 238
Query: 241 PYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
PYDCKN+T+RN I + DSCEDM+IEDCYISVGDD IAIKSGWDQYGI
Sbjct: 239 PYDCKNITVRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGI 298
Query: 292 AYGRPSMNILIRNLVVRSMV 311
AYG+PS NI IRN+V++SMV
Sbjct: 299 AYGQPSKNIRIRNVVLQSMV 318
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/331 (70%), Positives = 262/331 (79%), Gaps = 20/331 (6%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVV------ 54
MVE L RF H R D +R + + L+SHKTLFT LW+ AF SVF+WQR A +
Sbjct: 1 MVENLFPSRFQFHLQRLDPKRRLTSLLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT 60
Query: 55 ----GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKG 110
G F+ +PIPRLRP F+L DFGGVGDG TLNTEAF+RAV +ISKLG
Sbjct: 61 GPVGGKFTIFGKIKPIQPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSS 120
Query: 111 GG-QLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GG QLNVPPGRWLTAPFNLTSHMTLFLA+D+EIL +E+EKYWPLMPPLPSYGYGRE GP
Sbjct: 121 GGGQLNVPPGRWLTAPFNLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGP 180
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNI 229
R+GS IHGQNLKD+VITGHNGTINGQGQ+WWKK++++LLN TRGPLVQIMWSSDI+I+NI
Sbjct: 181 RYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANI 240
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAI 280
T+RDSPFWTLHPYDCKNVTIRN I + DSCEDMVIEDCYIS GDDAI
Sbjct: 241 TMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAI 300
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
AIKSGWDQ+GIAYGRPS NILIRNLVVRS++
Sbjct: 301 AIKSGWDQFGIAYGRPSTNILIRNLVVRSVI 331
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/331 (69%), Positives = 260/331 (78%), Gaps = 20/331 (6%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVV------ 54
MVE L RF H R D +R + + L+SHKTLFT LW+ AF SVF+WQR A +
Sbjct: 1 MVENLFPSRFQFHLQRLDPKRRLTSLLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT 60
Query: 55 ----GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKG 110
G F+ +PIPRLRP F+L DFGGVGDG TLNTEAF+RAV +ISKLG
Sbjct: 61 GPVGGKFTIFGKIKPIQPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSS 120
Query: 111 GG-QLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GG QLNVPPGRWLTAPF LTSHMTLFLA+D+EIL +E+EKYWPLMPPLPSYGYGRE GP
Sbjct: 121 GGGQLNVPPGRWLTAPFYLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGP 180
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNI 229
R+GS IHGQNLKD+VITGHNGTINGQGQ+WWKK++++LLN TRGPLVQIMWSSDI+I+NI
Sbjct: 181 RYGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANI 240
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYISVGDDAI 280
T+RDSPFWTLHPYDCKNVTIRN I DSCEDMVIEDCYIS GDDAI
Sbjct: 241 TMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAI 300
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
AIKSGWDQ+GIAYGRPS NILIRNLVVRS++
Sbjct: 301 AIKSGWDQFGIAYGRPSTNILIRNLVVRSVI 331
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/307 (73%), Positives = 250/307 (81%), Gaps = 11/307 (3%)
Query: 14 QNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLR 73
+N L R+ F +SH+TLF L +A FASVF+WQ N + GF L V+ P LR
Sbjct: 3 ENPGPLARFQAPF-TSHRTLFAFLCVATFASVFLWQGNEI-NGFLVLGGVVSGWTPPLLR 60
Query: 74 PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
P AFNLTDFGGVGDGVTLNT AF+RAV AISKL +KGGGQLNVPPG WLTAPFNLTSHMT
Sbjct: 61 PVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHMT 120
Query: 134 LFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LFLA DA IL I++EKYWPLMP LPSYGYGREH GPR+GS IHGQNL+DVVITGHNGTIN
Sbjct: 121 LFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTIN 180
Query: 194 GQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
GQGQ+WW KYR+KLLN+TRGPLVQIMWSSDI+I+NITLRDSPFWTLHPYDCKNVTI+N
Sbjct: 181 GQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNVT 240
Query: 254 ISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DSCEDM+IEDCYISVGDDAIAIKSGWDQYGIAYG+PS NI+IRN
Sbjct: 241 ILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRN 300
Query: 305 LVVRSMV 311
LVVRS V
Sbjct: 301 LVVRSNV 307
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/306 (72%), Positives = 250/306 (81%), Gaps = 22/306 (7%)
Query: 26 FLSSHKTLFTVLWLAAFASVFIWQRNAV----VGGFSFLRWGVASR------PIPRLRPA 75
FLSSHK+L TV W+A FAS+FIWQ V GFS W ++ P+LRP
Sbjct: 9 FLSSHKSLVTVFWIATFASLFIWQFGGVSTNLYTGFSVF-WSSSTTTTAASGEFPKLRPV 67
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FNLTDFG VGDGVT+NTEAF+RA+Y ISKL KGGGQLNVPPGRWLTAPFNLTS+MTLF
Sbjct: 68 VFNLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLF 127
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA++AEILA+++EKYWPL+PPLPSYGYGREHHGPR+GSFIHGQNL+DVV+TG+NG+INGQ
Sbjct: 128 LAENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQ 187
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
GQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ +NITLRDSPFWTLHPYDCKNVTI N I
Sbjct: 188 GQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTIL 247
Query: 256 KIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+F DSCEDM+IE+ YISVGDD IAIKSGWDQYG YGRPS NILIRNL
Sbjct: 248 A-PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNL 306
Query: 306 VVRSMV 311
++RSMV
Sbjct: 307 IIRSMV 312
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/294 (74%), Positives = 241/294 (81%), Gaps = 11/294 (3%)
Query: 27 LSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVG 86
+SHKTL LW+A ASV +WQR + G ++ GV R P+LRP F LT+FGGVG
Sbjct: 28 FASHKTLLAFLWVATLASVLLWQRTTISG--FLVQGGVPVRAPPKLRPVVFCLTEFGGVG 85
Query: 87 DGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE 146
DGVTLNTEAF+R V AISKLG KGGGQLNVPPGRWLTAPFNLTSHMTLFLA D+ ILA++
Sbjct: 86 DGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLARDSVILAVQ 145
Query: 147 NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQK 206
+EKYWPLMP LPSYGYGREH GPR+ S IHGQNL+DVVITGHNGTINGQGQ WW KYRQK
Sbjct: 146 DEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQTWWTKYRQK 205
Query: 207 LLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------ 260
LLN+TRGPLVQI+WSS+I+ISNITLRDSPFWTLHPYDCKNVT++N I
Sbjct: 206 LLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAPNTDG 265
Query: 261 ---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSCEDM+IEDCYISVGDDAIAIKSGWDQYGI YGRPS NI+IRNLVVRS V
Sbjct: 266 IDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNV 319
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 250/309 (80%), Gaps = 21/309 (6%)
Query: 23 VPAFLSSHKTLFTVLWLAAFASVFIWQRNAV----VGGFSFL------RWGVASRPIPRL 72
V FLSSHK+L TV W+A FAS+FIWQ V GFS V S P+L
Sbjct: 2 VRRFLSSHKSLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKL 61
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP FNLTDFG VGDGVT+NTEAF++A+Y ISKL KKGGGQLNVPPGRWLTAPFNLTS+M
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL+++AEILA+++EKYW L+PPLPSYGYGREHHGPR+GSFIHGQNL+DVV+TG+NG+I
Sbjct: 122 TLFLSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSI 181
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQGQ WWKKYRQKLLN+TRGPLVQIMWSSDI+ +NITLRDSPFWTLHPYDCKNVTI N
Sbjct: 182 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNM 241
Query: 253 FISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I +F DSCEDM+IE+ YISVGDD IAIKSGWDQYG YG+PS NILI
Sbjct: 242 TILA-PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILI 300
Query: 303 RNLVVRSMV 311
RNL++RSMV
Sbjct: 301 RNLIIRSMV 309
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/296 (75%), Positives = 241/296 (81%), Gaps = 11/296 (3%)
Query: 25 AFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGG 84
A +SHKTLF LW+A ASV +WQR + GF L GV R P+LRP F LT+FGG
Sbjct: 21 APFASHKTLFVFLWVATLASVLVWQRTTI-SGFLVLG-GVPVRTPPKLRPVVFCLTEFGG 78
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
VGDGVTLNTEAF+R V AISKLG KGGGQLNVPPGRWLTAPFNLTSHMTLFLA DA ILA
Sbjct: 79 VGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLARDAVILA 138
Query: 145 IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR 204
+++EKYWPLMP LPSYGYGREH GPR+ S IHGQNL DVVITGHNGTINGQGQ WW KYR
Sbjct: 139 VQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQTWWTKYR 198
Query: 205 QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---- 260
QKLLN+TRGPLVQI+WSS+I+ISNITLRDSPFWTLHPYDCKNVT++ I
Sbjct: 199 QKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPVSHAPNT 258
Query: 261 -----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSCEDM+IEDCYISVGDDAIAIKSGWDQYGI YGRPS NI+IRNLVVRS V
Sbjct: 259 DGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNV 314
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/309 (70%), Positives = 249/309 (80%), Gaps = 21/309 (6%)
Query: 23 VPAFLSSHKTLFTVLWLAAFASVFIWQRNAV----VGGFSFL------RWGVASRPIPRL 72
V FLSSHK+L TV W+A FAS+FIWQ V GFS V S P+L
Sbjct: 2 VRRFLSSHKSLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKL 61
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP FNLTDFG VGDGVT+NTEAF++A+Y ISKL KKGGGQLNVPPGRWLTAPFNLTS+M
Sbjct: 62 RPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYM 121
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL+++AEILA+++EKYW L+PPLPSYGYGREHHGPR+GSFIHGQNL+DVV+TG+NG+I
Sbjct: 122 TLFLSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSI 181
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQGQ WWKKYRQKLLN+TRGPL QIMWSSDI+ +NITLRDSPFWTLHPYDCKNVTI N
Sbjct: 182 NGQGQTWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNM 241
Query: 253 FISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I +F DSCEDM+IE+ YISVGDD IAIKSGWDQYG YG+PS NILI
Sbjct: 242 TILA-PVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILI 300
Query: 303 RNLVVRSMV 311
RNL++RSMV
Sbjct: 301 RNLIIRSMV 309
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/358 (64%), Positives = 262/358 (73%), Gaps = 47/358 (13%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVV------ 54
MVE L RF H R D +R + + L+SHKTLFT LW+ AF SVF+WQR A +
Sbjct: 1 MVENLFPSRFQFHLQRLDPKRRLTSLLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT 60
Query: 55 ----GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKG 110
G F+ +PIPRLRP F+L DFGGVGDG TLNTEAF+RAV +ISKLG
Sbjct: 61 GPVGGKFTIFGKIKPIQPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSS 120
Query: 111 GG-QLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE----------------------- 146
GG QLNVPPGRWLTAPFNLTSHMTLFLA+D+EIL +E
Sbjct: 121 GGGQLNVPPGRWLTAPFNLTSHMTLFLAEDSEILGVEEHNLGDFETLRDGCVRLVYLTCH 180
Query: 147 ----NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK 202
+EKYWPLMPPLPSYGYGRE GPR+GS IHGQNLKD+VITGHNGTINGQGQ+WWKK
Sbjct: 181 FNCQDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQSWWKK 240
Query: 203 YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-------- 254
++++LLN TRGPLVQIMWSSDI+I+NIT+RDSPFWTLHPYDCKNVTIRN I
Sbjct: 241 HQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAP 300
Query: 255 -SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
+ DSCEDMVIEDCYIS GDDAIAIKSGWDQ+GIAYGRPS NILIRNLVVRS++
Sbjct: 301 NTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVI 358
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/314 (65%), Positives = 245/314 (78%), Gaps = 14/314 (4%)
Query: 9 RFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVV--GGFSFLRWGVAS 66
R HL + RR V AFL+++KTL +W+A F VF+WQ +V+ GG +
Sbjct: 11 RLHLLHGQ---RRGVAAFLAANKTLLAAVWVAGFTLVFLWQSTSVLVRGGAGLGLRSASW 67
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
RP PRLRP A+NLTDFGGVGDG TLNT+AF+RAV AI+ L +GGGQLNVPPGRWLTAPF
Sbjct: 68 RPPPRLRPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPF 127
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTSHMTLFLA+ AEIL I +EKYW LMP LPSYGYGRE GPR+GS IHGQNLKDVVIT
Sbjct: 128 NLTSHMTLFLAEGAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVIT 187
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G+NG+INGQG+ WW K+R+++L NTR PLVQ+MWSSDI+++NITLR+SPFW HPYDC N
Sbjct: 188 GYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTN 247
Query: 247 VTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
VT+ N I + DSC+D++IE+CYISVGDDAIA+KSGWDQYGIAYGRPS
Sbjct: 248 VTVSNVTILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPS 307
Query: 298 MNILIRNLVVRSMV 311
NILIRN+ VRS+V
Sbjct: 308 SNILIRNVAVRSLV 321
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/301 (70%), Positives = 233/301 (77%), Gaps = 17/301 (5%)
Query: 25 AFLSSHKT---LFTVLWLAAFASVF-IWQRNAVVGGFSFLRWGVASR-PIPRLRPAAFNL 79
F S HK+ F L +AA SVF +WQRN + G FL G P+LRP FNL
Sbjct: 2 VFSSPHKSTSFFFVFLIIAALGSVFLVWQRNVING---FLVLGEELNWEAPKLRPVVFNL 58
Query: 80 TDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADD 139
TDFGGVGDGVTLNT+AF+RAV ISK +GG QLNVPPG WLT+PFNLTS MTLFLA D
Sbjct: 59 TDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTSPFNLTSRMTLFLARD 118
Query: 140 AEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW 199
A ILA+++EKYWPLMP LPSYGYGREH GPR+ S IHGQNLKDVVITGHNGTINGQGQ W
Sbjct: 119 AVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVVITGHNGTINGQGQTW 178
Query: 200 WKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL 259
W K+ KLLN TRGPLVQIM+SSDI+ISNITLRDSPFWTLHPYDCKNVTI+N I
Sbjct: 179 WTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVY 238
Query: 260 F---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSM 310
DSCEDM+IEDCYISVGDDAIAIKSGWDQYGIAY +PS NI+IRNLVVRS
Sbjct: 239 HAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSN 298
Query: 311 V 311
V
Sbjct: 299 V 299
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/323 (65%), Positives = 245/323 (75%), Gaps = 15/323 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNA--VVGGFS 58
MVE S GR+ LH + P RR AFL+++KTL +W+A F VF+WQ + V G
Sbjct: 1 MVET-SGGRWRLHLHGP--RRSAAAFLAANKTLLAAVWVAGFTLVFLWQSASMFVAGAGG 57
Query: 59 FLRWGVA-SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
R + SRP PRLRP A+NLTDFGGVGDG T+NT AF+RAV I+ +GG QLNVP
Sbjct: 58 GPRPALPPSRPAPRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVP 117
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PGRWLT PFNLTSHMTLFLA+ AEIL I +EK WPLMP LPSYGYGRE GPRFGS IHG
Sbjct: 118 PGRWLTGPFNLTSHMTLFLAEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHG 177
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFW 237
QNLKDVVITG+NG+INGQG+ WW K+R+++L NTR PLVQ+MWS DI+++NITLR+SPFW
Sbjct: 178 QNLKDVVITGYNGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFW 237
Query: 238 TLHPYDCKNVTIRNAFI-SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
HPYDC NVT+ N I S I DSCED++IE+CYISVGDDAIAIKSGWDQ
Sbjct: 238 HFHPYDCTNVTVSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQ 297
Query: 289 YGIAYGRPSMNILIRNLVVRSMV 311
YGIAYGR S NILIRN+ VRS+V
Sbjct: 298 YGIAYGRSSSNILIRNVTVRSLV 320
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/339 (59%), Positives = 241/339 (71%), Gaps = 39/339 (11%)
Query: 8 GRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAV-----VGGFSFLRW 62
GR H H R R V AFL+++KTL W+ F VF+WQ V GG FLR
Sbjct: 9 GRLHPHGQR----RSVAAFLAANKTLLAAAWVVGFTLVFLWQSAKVSVGGGGGGGGFLRL 64
Query: 63 GVASRPIPRL-----RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
A P P RP A+ LTDFGGVGDG +NTEAF+RAV AI+ L ++GGGQLNVP
Sbjct: 65 RSAPPPPPSRPAPLLRPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVP 124
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAI----------------ENEKYWPLMPPLPSYG 161
GRWLTAPFNLTSHMTLFLA+ +EIL I +E+YWPLMP LPSYG
Sbjct: 125 LGRWLTAPFNLTSHMTLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYG 184
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWS 221
YGRE GPRFGS IHGQNLKDVVITGHNG+INGQG+ WW K+R+++LNNTR PL+Q+MWS
Sbjct: 185 YGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWS 244
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF--------DSCEDMVIEDCY 272
DI+++NITL++SPFW HPYDC N+T+ N I + I DSC+D++IE+CY
Sbjct: 245 KDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCY 304
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
ISVGDDAIA+KSGWDQYGIAYGRPS NI+IRN++ RS+V
Sbjct: 305 ISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLV 343
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/309 (63%), Positives = 236/309 (76%), Gaps = 17/309 (5%)
Query: 20 RRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAV----VGGFSFLRWGVASRPIPRLRP- 74
RR AF++++K L W+ FA VF+WQ ++ GG +LR P PR P
Sbjct: 12 RRGAVAFVAANKALLAAAWVVGFALVFLWQSASMSFGSAGGGGYLRLLSVPPPPPRPAPR 71
Query: 75 ---AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
A+N+TDFG VGDG +NT AF+RAV AI+ L ++GGGQLNVPPGRWLTAPFNLTSH
Sbjct: 72 LRPTAYNITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSH 131
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
MTLFLA+ AEIL I +EKYWPLMP LPSYGYGRE GPRFGS IHGQNL+DVVITGHNG+
Sbjct: 132 MTLFLAEGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGS 191
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
INGQG+ WW K+R+++LNNTR PLVQ+MWS DI+++NITLR+SPFW LHPYDC NVT+ N
Sbjct: 192 INGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSN 251
Query: 252 AFI-SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I S + DSC+D++IE+CYISVGDDAIAIKSGWDQYGIAYGRPS +ILI
Sbjct: 252 VTIMSPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILI 311
Query: 303 RNLVVRSMV 311
RN+ RS+V
Sbjct: 312 RNVTARSLV 320
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/330 (59%), Positives = 235/330 (71%), Gaps = 27/330 (8%)
Query: 4 ILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWG 63
++ G LHQ RR AF++++K L W+ FA VF+WQ ++ G +
Sbjct: 1 MVETGGGRLHQ-----RRGAVAFVAANKALLAAAWVVGFALVFLWQSASMSFGSAGAGGA 55
Query: 64 VASRPIPRLRP-------------AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKG 110
+ L A+NLTDFG VGDG +NTEAF+RAV I+ L ++G
Sbjct: 56 AGGGFLRLLSAPPPPPRPAPRLRPTAYNLTDFGAVGDGRAVNTEAFERAVETIAALAERG 115
Query: 111 GGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPR 170
GGQLNVPPGRWLTAPFNLTSHMTLFLA+ AEIL I +EKYWPLMP LPSYGYGRE GPR
Sbjct: 116 GGQLNVPPGRWLTAPFNLTSHMTLFLAEGAEILGITDEKYWPLMPALPSYGYGRERKGPR 175
Query: 171 FGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNIT 230
FGS IHGQNLKDVVITGHNG+INGQG+ WW K+R+++LNNTR PLVQ+MWS DI+I+NIT
Sbjct: 176 FGSLIHGQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLVQLMWSKDIIIANIT 235
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF--------DSCEDMVIEDCYISVGDDAIA 281
LR+SPFW LHPYDC NVT+ N I S + DS +D++IE+CYISVGDDAIA
Sbjct: 236 LRNSPFWHLHPYDCTNVTVSNVTILSPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAIA 295
Query: 282 IKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
IKSGWDQYGIAYGRPS NI IRN+ RS+V
Sbjct: 296 IKSGWDQYGIAYGRPSSNISIRNVNARSLV 325
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/306 (62%), Positives = 226/306 (73%), Gaps = 20/306 (6%)
Query: 20 RRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRL-----RP 74
RRW PA + LWL FA VF+WQ +V + R + R + L P
Sbjct: 42 RRWAPAPF---RACLLALWLLGFALVFLWQSTSVGRVRLYTRPPMPKRAVASLGHWAASP 98
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
++L +FG VGDG T+NT AF+ A+ AI++ +GGG+L VP GRWLTAPFNLTSHMTL
Sbjct: 99 PVYDLREFGAVGDGRTVNTAAFESAIAAIAE---RGGGRLTVPAGRWLTAPFNLTSHMTL 155
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
FLA AEIL I++E+YWPLM PLPSYGYGREH GPR+GS IHGQ+LK V ITGHNGTING
Sbjct: 156 FLAAGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTING 215
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QGQ+WW K+R+KLLN+TRGPLVQ+M SS+I+ISNITLRDSPFWTLH YDCKNVTI I
Sbjct: 216 QGQSWWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTI 275
Query: 255 ---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ DSCE++VI++CYISVGDD IAIKSGWDQYGIAYGRPS NI I+N+
Sbjct: 276 LAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNV 335
Query: 306 VVRSMV 311
V+RSMV
Sbjct: 336 VIRSMV 341
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 236/329 (71%), Gaps = 35/329 (10%)
Query: 5 LSLGRFHLHQNRPDLRRWVPAFLS-SHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWG 63
LS G H RRW P +S S++ LWL F VF+WQ N +G
Sbjct: 40 LSRGAHQFHH-----RRWAPPTISPSYRAYLVALWLVGFVLVFLWQ-NTSMGRLRLYH-- 91
Query: 64 VASRPIPRLRPAA------------FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGG 111
P+P+ P+A ++L +FGGVGDG TLNT AF+ AV AIS+ +GG
Sbjct: 92 --RPPMPKRAPSAAAMGQWVASPPVYDLREFGGVGDGRTLNTAAFEAAVAAISE---RGG 146
Query: 112 GQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRF 171
G+L VP GRWLTAPFNLTSHMTLFLA AEIL +++E+YWPLM PLPSYGYGREH GPR+
Sbjct: 147 GRLTVPAGRWLTAPFNLTSHMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHKGPRY 206
Query: 172 GSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITL 231
GS IHGQ+LKDV+ITGHNGTINGQGQ+WW K+R+KLLN+TRGPLVQ+M SS+I+ISNITL
Sbjct: 207 GSLIHGQDLKDVIITGHNGTINGQGQSWWIKFRKKLLNHTRGPLVQLMRSSNIIISNITL 266
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAI 282
RDSPFWTLH YDCKNVTI I + DSCE+++IE+CYISVGDD +AI
Sbjct: 267 RDSPFWTLHVYDCKNVTISGTTILAPIVGAPNTDGIDPDSCENVMIENCYISVGDDGVAI 326
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
KSGWDQYGIAYGRPS NI IRN+++RSMV
Sbjct: 327 KSGWDQYGIAYGRPSTNITIRNVIIRSMV 355
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/308 (61%), Positives = 226/308 (73%), Gaps = 20/308 (6%)
Query: 20 RRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLR------ 73
RRW P+ + ++ L WL FA V +WQ + + R + R L
Sbjct: 40 RRWGPSSIRAYHLLLA-FWLVGFALVVVWQTTSAGRVRLYTRPPMPKRAAASLSLGQWVA 98
Query: 74 -PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
P ++L +FG VGDG T+NT AF+ A+ AI++ +GGG+L VP GRWLTAPFNLTSHM
Sbjct: 99 SPPVYDLREFGAVGDGRTVNTAAFESAIAAIAE---RGGGRLTVPAGRWLTAPFNLTSHM 155
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
LFLA AEIL I++E+YWPLM PLPSYGYGREH GPR+GS IHGQ+LKDV ITGHNGTI
Sbjct: 156 ILFLAAGAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTI 215
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQGQ+WW K+R+KLLN+TRGPLVQ+M SSDI+ISNITLRDSPFWTLH YDCKNVTI
Sbjct: 216 NGQGQSWWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISET 275
Query: 253 FI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I + DSCE++VI++CYISVGDD IAIKSGWDQYGIAYGRPS NI+I+
Sbjct: 276 TILAPIAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQ 335
Query: 304 NLVVRSMV 311
N+V+RSMV
Sbjct: 336 NVVIRSMV 343
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/311 (59%), Positives = 227/311 (72%), Gaps = 22/311 (7%)
Query: 20 RRW--VPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLR---- 73
RRW A S++ + LWL FA VF+WQ +V + R + + P +
Sbjct: 44 RRWGGAAAISPSYRAVLLALWLVGFALVFLWQSTSVGRARLYTRPPLLPKRAPSAQGMGQ 103
Query: 74 ----PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P ++L +FGGVGDG TLNTEAF V A++ + ++GGG+L VP GRWLTAPFNLT
Sbjct: 104 WVAAPPVYDLREFGGVGDGRTLNTEAF---VAAVASIAERGGGRLVVPAGRWLTAPFNLT 160
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S MTLFLA AEIL +++E+YWPLM PLPSYGYGREH GPR+GS IHGQ+LKDV ITG N
Sbjct: 161 SRMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQN 220
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTINGQGQ+WW K+R+K+LN+TRGPLVQ+M SS+I ISNITLRDSPFWTLH YDCK+VTI
Sbjct: 221 GTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTI 280
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
+ I + DSCE++VI++CYISVGDD IAIKSGWDQYGIAYGRPS NI
Sbjct: 281 SDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNI 340
Query: 301 LIRNLVVRSMV 311
+I N+ +RSMV
Sbjct: 341 IIHNVTIRSMV 351
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 227/311 (72%), Gaps = 22/311 (7%)
Query: 20 RRW--VPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLR---- 73
RRW A S++ + LWL FA VF+WQ +V + R + + P +
Sbjct: 44 RRWGGAAAISPSYRAVLLALWLVGFALVFLWQSTSVGRARLYTRPPLLPKRAPSAQGMGQ 103
Query: 74 ----PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P ++L +FGGVGDG TLNTEAF V A++ + ++GGG+L VP GRWLTAPFNLT
Sbjct: 104 WVAAPPVYDLREFGGVGDGRTLNTEAF---VAAVASIAERGGGRLVVPAGRWLTAPFNLT 160
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+ MTLFLA AEIL +++E+YWPLM PLPSYGYGREH GPR+GS IHGQ+LKDV ITG N
Sbjct: 161 NRMTLFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQN 220
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTINGQGQ+WW K+R+K+LN+TRGPLVQ+M SS+I ISNITLRDSPFWTLH YDCK+VTI
Sbjct: 221 GTINGQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTI 280
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
+ I + DSCE++VI++CYISVGDD IAIKSGWDQYGIAYGRPS NI
Sbjct: 281 SDTTILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNI 340
Query: 301 LIRNLVVRSMV 311
+I N+ +RSMV
Sbjct: 341 IIHNVTIRSMV 351
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/313 (60%), Positives = 229/313 (73%), Gaps = 29/313 (9%)
Query: 20 RRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAA--- 76
RRW PA S++ LWL F VF+WQ N +G S P+P+ P+
Sbjct: 53 RRWAPAISPSYRAYLVALWLVGFVLVFLWQ-NTSMGRVRLYN----SPPMPKRAPSGAVM 107
Query: 77 ---------FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
++L +FGG+GDG TLNT AF+ AV AIS+ +GGG+L VP GRWLTAPFN
Sbjct: 108 GQWVASPPVYDLREFGGIGDGRTLNTAAFEAAVAAISE---RGGGRLTVPAGRWLTAPFN 164
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTS MTLFLA AEIL I++E+YWPLMPPLPSYGYGREH GPR+GS IHGQ+LKDV +TG
Sbjct: 165 LTSGMTLFLASGAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTG 224
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
HNGTINGQG++WW K+R+KLLN+TRGPLVQ+M SS+I+ISNITL+DSPFWTLH YDCKNV
Sbjct: 225 HNGTINGQGKSWWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNV 284
Query: 248 TIRNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
TI I + DSCE+++I++CYISVGDD +AIKSGWDQYGIAYGRPS
Sbjct: 285 TISETTILAPIVGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPST 344
Query: 299 NILIRNLVVRSMV 311
NI IR++ +RSMV
Sbjct: 345 NITIRDVTIRSMV 357
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 169/247 (68%), Positives = 201/247 (81%), Gaps = 12/247 (4%)
Query: 74 PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
P ++L +FGGVGDG TLNTEAF V A++ + ++GGG+L VP GRWLTAPFNLTS MT
Sbjct: 8 PPVYDLREFGGVGDGRTLNTEAF---VAAVASIAERGGGRLVVPAGRWLTAPFNLTSRMT 64
Query: 134 LFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LFLA AEIL +++E+YWPLM PLPSYGYGREH GPR+GS IHGQ+LKDV ITG NGTIN
Sbjct: 65 LFLAAGAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTIN 124
Query: 194 GQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
GQGQ+WW K+R+K+LN+TRGPLVQ+M SS+I ISNITLRDSPFWTLH YDCK+VTI +
Sbjct: 125 GQGQSWWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTT 184
Query: 254 ISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DSCE++VI++CYISVGDD IAIKSGWDQYGIAYGRPS NI+I N
Sbjct: 185 ILAPIVGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHN 244
Query: 305 LVVRSMV 311
+ +RSMV
Sbjct: 245 VTIRSMV 251
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/294 (58%), Positives = 214/294 (72%), Gaps = 16/294 (5%)
Query: 29 SHKTLFTVLWLAAFASVFIWQRN--AVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVG 86
S + F +LW+A F +F++Q N A V G + +R +PRLRP FNLTDFGG+G
Sbjct: 6 SKRRGFFLLWIAFFLCLFVYQSNYIAQVSGSKRI-----ARAVPRLRPVVFNLTDFGGIG 60
Query: 87 DGVTLNTEAFQRAVYAISKLG-KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
DG T+NT AF+RAV IS K GG QLNVP G WLTAPFNLTSHMTLFL +DA ILA
Sbjct: 61 DGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLEEDATILAT 120
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ 205
++E WPLM PLPSYG GRE GPR+GS IHGQ+L+D+VITGHNGTI+G G+ WW+K ++
Sbjct: 121 QSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKR 180
Query: 206 KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKI 257
K L +TRG L+Q+MWS I IS++TLR+SPFWT+HPYDC+NVTIR I +
Sbjct: 181 KQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDG 240
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSC +++IE CYISVGDD +A+KSGWDQYGI YG+P NI IRN+ V + V
Sbjct: 241 IDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPV 294
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 173/294 (58%), Positives = 213/294 (72%), Gaps = 16/294 (5%)
Query: 29 SHKTLFTVLWLAAFASVFIWQRN--AVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVG 86
S + F +LW+A F +F++Q N A V G + +R +PRLRP FNLTDFGG+G
Sbjct: 6 SKRRGFFLLWIAFFLCLFVYQSNYIAQVSGSKRI-----ARAVPRLRPVVFNLTDFGGIG 60
Query: 87 DGVTLNTEAFQRAVYAISKLG-KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
DG T+NT AF+RAV IS K GG QLNVP G WLTAPFNLTSHMTLFL +DA ILA
Sbjct: 61 DGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFLEEDATILAT 120
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ 205
++E WPLM PLPSYG GRE GPR+GS IHGQ+L+D+VITGHNGTI+G G+ WW+K +
Sbjct: 121 QSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNGRKWWEKAKL 180
Query: 206 KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKI 257
K L +TRG L+Q MWS I IS++TLR+SPFWT+HPYDC+NVTIR I +
Sbjct: 181 KQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNTDG 240
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSC +++IE+CYISVGDD +A+KSGWDQYGI YG+P NI IRN+ V + V
Sbjct: 241 IDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPV 294
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/249 (71%), Positives = 199/249 (79%), Gaps = 20/249 (8%)
Query: 26 FLSSHKTLFTVLWLAAFASVFIWQRNA------------VVGGFSFLRW--------GVA 65
FLSSHK+L TV W+AAFAS+FIWQ V G S + W
Sbjct: 12 FLSSHKSLVTVFWIAAFASLFIWQSRGRGGGGGGASLYRVNGSLSSVFWWTATTTTTSSD 71
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
+ PRLRP +FNLTDFG VGDGVT+NTEAF+RAVYAISKL KKGGGQLNVPPGRWLTAP
Sbjct: 72 AGEFPRLRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAP 131
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
FNLTS MTLFLA+DAEILA+++E WPL+PPLPSYGYGREH+GPR+GSFIHGQNLKDVV+
Sbjct: 132 FNLTSFMTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVV 191
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
TG+NG++NGQG WWKKYR KLLN+TRGPLVQIMWSSD + +NITLRDSPFWTLHPYDCK
Sbjct: 192 TGNNGSVNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCK 251
Query: 246 NVTIRNAFI 254
NVTI N I
Sbjct: 252 NVTITNMTI 260
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 200/282 (70%), Gaps = 13/282 (4%)
Query: 38 WLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQ 97
W +F+ VF WQ N + PIP LRP FNLTDFG VGDG ++NT F+
Sbjct: 3 WALSFSLVFFWQVN-----YRNRHGLPPPPPIPNLRPHVFNLTDFGAVGDGYSVNTRCFE 57
Query: 98 RAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPL 157
A+ AI + GG QL V PGRWLTAPFN+TSHMTLFL+ A I+AI++ WP++P L
Sbjct: 58 DAIAAIKERASDGGAQLIVGPGRWLTAPFNVTSHMTLFLSRGATIVAIQDAGLWPILPAL 117
Query: 158 PSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQ 217
PSYG GRE G R+ S IHGQ+++D V+TGHNG+I+GQG WW++++QK L TRG LV+
Sbjct: 118 PSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNGSIDGQGGWWWEQHKQKRLRYTRGRLVE 177
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIE 269
+MWS++I+IS++TL++SPFW LHPYDC NVTI I + DSC+++++E
Sbjct: 178 LMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISGVTILAPLDAPNTDGIDPDSCKNVLVE 237
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
+CYISVGDDA+A+KSGWD+YGI Y RP +N+ IRN++ RS +
Sbjct: 238 NCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQI 279
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/179 (79%), Positives = 155/179 (86%), Gaps = 11/179 (6%)
Query: 143 LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK 202
+A +EKYWPLMPPLPSYGYGRE GPR+GS IHGQNLKDVVITGHNGTINGQGQAWWKK
Sbjct: 211 IADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKK 270
Query: 203 YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-- 260
+RQK LN TRGPL+QIMWSSDI+I++ITLRDSPFWTLHPYDCKN+TI+ I +F
Sbjct: 271 FRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILA-PVFEA 329
Query: 261 --------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSCEDM+IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI+IRNLVVRSMV
Sbjct: 330 PNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMV 388
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/150 (74%), Positives = 122/150 (81%), Gaps = 3/150 (2%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFL 60
MVE +LGRFH HQ R D +R VPAF++SHKTLF VLW+AAF SVFIWQRN VVGGF
Sbjct: 1 MVETSTLGRFH-HQ-RLDFKRCVPAFITSHKTLFMVLWIAAFLSVFIWQRNMVVGGFMVF 58
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
V RPIP +RP FNLTDFGGVGDGVTLNTEAF+RAV AISK GKKGG QLNVPPGR
Sbjct: 59 G-RVPVRPIPNMRPVVFNLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGR 117
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKY 150
WLTAPFNLTSH+TLFLA DA ILAI+ E +
Sbjct: 118 WLTAPFNLTSHITLFLAQDAVILAIDRENW 147
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 162/323 (50%), Positives = 196/323 (60%), Gaps = 63/323 (19%)
Query: 8 GRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAV-----VGGFSFLRW 62
GR H H R R V AFL+++KTL W+ F VF+WQ V GG FLR
Sbjct: 9 GRLHPHGQR----RSVAAFLAANKTLLAAAWVIGFTLVFLWQSAKVSVGGGGGGGGFLRL 64
Query: 63 GVASRPIPRL-----RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
A P P RP A+ LTDFGGV DG
Sbjct: 65 RSAPPPPPSRPAPLLRPKAYELTDFGGVWDG----------------------------- 95
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
A F + L D +E+YWPLMP LPSYGYGRE GPRFGS IHG
Sbjct: 96 -----RASFREVQKLVLLSGFD------RDERYWPLMPALPSYGYGRERKGPRFGSLIHG 144
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFW 237
QNLKDVVITGHNG+INGQG+ WW K+R+++LNNTR PL+Q+MWS DI+++NITL++SPFW
Sbjct: 145 QNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFW 204
Query: 238 TLHPYDCKNVTIRNAFI-SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
HPYDC N+T+ N I + I DSC+D++IE+CYISVGDDAIA+KSGWDQ
Sbjct: 205 HFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQ 264
Query: 289 YGIAYGRPSMNILIRNLVVRSMV 311
YGIAYGRPS NI+IRN++ RS+V
Sbjct: 265 YGIAYGRPSRNIVIRNVMARSLV 287
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 175/247 (70%), Gaps = 12/247 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R + ++ +FGGVGDG T+NTEAF++A+ +S+ + GGGQL +PPGRWLT FNLT
Sbjct: 39 PSCRAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQLYIPPGRWLTGSFNLT 98
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
H TL+L +A IL ++ + WPL+PPLPSYG GR+ GPR+ S I+G NL DVVITG N
Sbjct: 99 DHFTLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSSLINGYNLTDVVITGDN 158
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG WW+K+ +K+L NTRG LV++M+S DI+ISN+T +SP W LHP N+ I
Sbjct: 159 GTIDGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILI 218
Query: 250 RNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
+ +++ + DSC + IEDCY+ GDD +AIKSGWD+YGI++G PS +
Sbjct: 219 Q--YVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQH 276
Query: 300 ILIRNLV 306
I+IR LV
Sbjct: 277 IVIRRLV 283
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 164/250 (65%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P P R A ++ FGG GDG TLNT AF RAV +I + GG +L VPPG WLT PFN
Sbjct: 35 PAPPRRGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFN 94
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTS MTLFLA A I A ++ WPL+ PLPSYG GRE G R+ S IHG L+DVVITG
Sbjct: 95 LTSRMTLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITG 154
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG AWW ++ + L TR L+++M SSDI++SN+ +DSPFW +HP C NV
Sbjct: 155 ENGTIDGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNV 214
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
IRN I DS ++ IEDCYIS GDD+IAIKSGWD+YGIAYGR S
Sbjct: 215 VIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSG 274
Query: 300 ILIRNLVVRS 309
I +R + S
Sbjct: 275 ITVRRITGSS 284
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 173/255 (67%), Gaps = 11/255 (4%)
Query: 64 VASRPIP---RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
V SR +P R RP F++ DFGGV DG+TLNT+AFQ+A+ I GK GG L +P G+
Sbjct: 14 VESRLVPGLSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGK 73
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLT FNLTSHMTLFL DA ILA E+ + WP++ PLPSYG GRE G R+ S +HG +
Sbjct: 74 WLTGCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRI 133
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
DV ITG+NGTI+GQG WW ++R K L +TRG LV+ M+SS+IL+ N+TL +SPFWTLH
Sbjct: 134 TDVAITGNNGTIDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLH 193
Query: 241 PYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P +V I+ I DS ++ I D YIS GDDA+A+KSGWD+YG+A
Sbjct: 194 PVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLA 253
Query: 293 YGRPSMNILIRNLVV 307
+ RPS ++ + NL V
Sbjct: 254 FNRPSHDVFLVNLTV 268
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 173/255 (67%), Gaps = 11/255 (4%)
Query: 64 VASRPIP---RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
V SR +P R RP F++ DFGGV DG+TLNT+AFQ+A+ I GK GG L +P G+
Sbjct: 43 VESRLVPGLSRARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGK 102
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLT FNLTSHMTLFL DA ILA E+ + WP++ PLPSYG GRE G R+ S +HG +
Sbjct: 103 WLTGCFNLTSHMTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRI 162
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
DV ITG+NGTI+GQG WW ++R K L +TRG LV+ M+SS+IL+ N+TL +SPFWTLH
Sbjct: 163 TDVAITGNNGTIDGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLH 222
Query: 241 PYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P +V I+ I DS ++ I D YIS GDDA+A+KSGWD+YG+A
Sbjct: 223 PVYTSDVMIKGVTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLA 282
Query: 293 YGRPSMNILIRNLVV 307
+ RPS ++ + NL V
Sbjct: 283 FNRPSHDVFLVNLTV 297
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 172/249 (69%), Gaps = 8/249 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP GRWLT F+L S
Sbjct: 37 EVRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLIS 96
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H+TL+L DA IL N + WP++ PLPSYG GRE G R S I+G NL DV+ITG+NG
Sbjct: 97 HLTLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNG 156
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW ++ + L+ TR LV++M S+ +LISN+T +SPFWT+HP C VT++
Sbjct: 157 TIDGQGSIWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQ 216
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I DS +++ IEDCYIS GDD IAIKSGWD+YGIAYGRPS NI+I
Sbjct: 217 NVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIII 276
Query: 303 RNLVVRSMV 311
LV ++
Sbjct: 277 HRLVGKTQT 285
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP A ++TDFGGVGDG TLNT AF++AVY I ++GG L+VP G WLT FNLTSHM
Sbjct: 41 RPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHM 100
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFLA A + A ++ + WPLM PLPSYG GRE G R+ SFIHG L+DV ITG G I
Sbjct: 101 TLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVI 160
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG+ WW +R++ L +TR LV+ M S+ I ISNI L++SPFW +HP C NV + N
Sbjct: 161 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 220
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS I IR
Sbjct: 221 MILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 280
Query: 305 L 305
+
Sbjct: 281 V 281
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/250 (54%), Positives = 163/250 (65%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P P R A ++ FGG GDG TLNT AF RAV I + GG +L VPPG WLT PFN
Sbjct: 36 PAPPRRGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFN 95
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTS MTLFLA A + A ++ WPL+ PLPSYG GRE G R+ S IHG L+DVVITG
Sbjct: 96 LTSRMTLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITG 155
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW +++ L TR L+++M SS I++SN+ +DSPFW +HP C NV
Sbjct: 156 ENGTIDGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNV 215
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
IRN I DS ++ IEDCYIS GDDAIAIKSGWD+YGIAYGRPS +
Sbjct: 216 VIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSD 275
Query: 300 ILIRNLVVRS 309
I +R + S
Sbjct: 276 ITVRRITGSS 285
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/249 (53%), Positives = 171/249 (68%), Gaps = 8/249 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP GRWLT F+L S
Sbjct: 37 EVRPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLIS 96
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H+TL L DA IL N + WP++ PLPSYG GRE G R S I+G NL DV+ITG+NG
Sbjct: 97 HLTLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNG 156
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW ++ + L+ TR LV++M S+ +LISN+T +SPFWT+HP C VT++
Sbjct: 157 TIDGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQ 216
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I DS +++ IEDCYIS GDD IAIKSGWD+YGIAYGRPS NI+I
Sbjct: 217 NVRILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIII 276
Query: 303 RNLVVRSMV 311
LV R+
Sbjct: 277 HRLVGRTQT 285
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 16/265 (6%)
Query: 49 QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGK 108
R++ G F R G + R R A+ ++ +FG VGDGVT NT AF+RAV A+
Sbjct: 60 DRDSCAG---FYRGGSSGR-----RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAG 111
Query: 109 KGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHG 168
GG +L VPPGRW+T FNLTS TLFL A IL ++ + WPL+ PLPSYG GRE G
Sbjct: 112 GGGARLEVPPGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLG 171
Query: 169 PRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISN 228
PR S IHG+ L DVVITG+NGTI+GQG+ WW + + LN+TRG L++++ S++I+ISN
Sbjct: 172 PRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISN 231
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAI 280
ITLR+SPFWT+HP C+NV IRN + + DS ++ IEDCYI GDD +
Sbjct: 232 ITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLV 291
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNL 305
A+KSGWDQYGI+ G+PS NI+I+ +
Sbjct: 292 AVKSGWDQYGISVGKPSSNIIIQRV 316
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 16/265 (6%)
Query: 49 QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGK 108
R++ G F R G + R R A+ ++ +FG VGDGVT NT AF+RAV A+
Sbjct: 60 DRDSCAG---FYRGGSSGR-----RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAG 111
Query: 109 KGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHG 168
GG +L VPPGRW+T FNLTS TLFL A IL ++ + WPL+ PLPSYG GRE G
Sbjct: 112 GGGARLEVPPGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLG 171
Query: 169 PRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISN 228
PR S IHG+ L DVVITG+NGTI+GQG+ WW + + LN+TRG L++++ S++I+ISN
Sbjct: 172 PRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISN 231
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAI 280
ITLR+SPFWT+HP C+NV IRN + + DS ++ IEDCYI GDD +
Sbjct: 232 ITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLV 291
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNL 305
A+KSGWDQYGI+ G+PS NI+I+ +
Sbjct: 292 AVKSGWDQYGISVGKPSSNIIIQRV 316
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 16/265 (6%)
Query: 49 QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGK 108
R++ G F R G + R R A+ ++ +FG VGDGVT NT AF+RAV A+
Sbjct: 60 DRDSCAG---FYRGGSSGR-----RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAG 111
Query: 109 KGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHG 168
GG +L VPPGRW+T FNLTS TLFL A IL ++ + WPL+ PLPSYG GRE G
Sbjct: 112 GGGARLEVPPGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLG 171
Query: 169 PRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISN 228
PR S IHG+ L DVVITG+NGTI+GQG+ WW + + LN+TRG L++++ S++I+ISN
Sbjct: 172 PRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISN 231
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAI 280
ITLR+SPFWT+HP C+NV IRN + + DS ++ IEDCYI GDD +
Sbjct: 232 ITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLV 291
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNL 305
A+KSGWDQYGI+ G+PS NI+I+ +
Sbjct: 292 AVKSGWDQYGISVGKPSSNIIIQRV 316
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 173/249 (69%), Gaps = 8/249 (3%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+ ++RP + ++T+FG VGDG+TLNT+AFQ A++ ++ KGG +L VP GRWLT F+L
Sbjct: 35 LDKVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDL 94
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
SH+TL+L DA IL N + WP++ PLPSYG GRE G R S I+G NL DV+ITG+
Sbjct: 95 ISHLTLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGN 154
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
G I+GQG WW +R K L+ TR LV++M S+ +LISN+T +SPFWT+HP C VT
Sbjct: 155 EGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVT 214
Query: 249 IRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
++N I + DS +D+ IEDCYIS GDD IAIKSGWD+YGIA+GRPS NI
Sbjct: 215 VQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNI 274
Query: 301 LIRNLVVRS 309
+I LV ++
Sbjct: 275 VIHRLVGKT 283
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/271 (50%), Positives = 180/271 (66%), Gaps = 14/271 (5%)
Query: 53 VVGGFSFLRWGVASRP------IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKL 106
V+ FS W V S + +RP + ++T+FG VGDG+TLNT+AFQ A++ ++
Sbjct: 21 VLALFSCSTWTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSF 80
Query: 107 GKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREH 166
KGG +L VP GRWLT F+L SH+TL+L +DA IL N WP++ PLPSYG GRE
Sbjct: 81 ADKGGAKLFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLPSYGRGREL 140
Query: 167 HGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILI 226
G R S I+G NL DVVITG+NGTI+GQG WW + K LN TR LV++M S+ +LI
Sbjct: 141 PGGRHRSLIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLI 200
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDD 278
SN+T +SPFWT+HP C +VTI+N I + DS +++ IEDCYIS GDD
Sbjct: 201 SNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDD 260
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I+IKSGWD YGI++GRPS NI IR L+ ++
Sbjct: 261 LISIKSGWDGYGISFGRPSTNINIRRLIGKT 291
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 173/247 (70%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+RP + ++T+FG VGDG+TLNT AFQ A++ ++ KGG +L VP GRWLT F+L S
Sbjct: 45 EVRPHSVSITEFGAVGDGITLNTIAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLIS 104
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H+TL+L +DA IL N WP++ PLPSYG+GRE G R S I+G+NL DVVITG+NG
Sbjct: 105 HLTLWLDNDAVILGSMNSDDWPVVDPLPSYGHGRELPGGRHRSLIYGRNLTDVVITGNNG 164
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW + K LN TR LV++M S+ +LISN+T +SPFWT+HP C +VTI+
Sbjct: 165 TIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQ 224
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I + DS +++ IEDCYIS GDD I+IKSGWD YGI++GRPS NI I
Sbjct: 225 NVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINI 284
Query: 303 RNLVVRS 309
R L+ ++
Sbjct: 285 RRLIGKT 291
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP ++ DFGGVGDG TLNT AF++AVY I ++GG L+VP G WL FNLTSHM
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFLA A + A ++ + WPL+ PLPSYG GRE GPR+ SFIHG L+DVVITG G I
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVI 165
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG+ WW +R++ L +TR LV+ M S+ I ISNI L++SPFW +HP C NV + N
Sbjct: 166 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 225
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS + +R
Sbjct: 226 MILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRR 285
Query: 305 L 305
+
Sbjct: 286 V 286
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 172/245 (70%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++++FG VGDG TLNT AF+ A++ + KGG QL +P GRWLT L SH+
Sbjct: 45 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 104
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL ++A IL ++ +P++P LPSYG GRE GPR S I+G+ L+DVVITG NGTI
Sbjct: 105 TLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVITGDNGTI 164
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG WW ++ K L+ TRG LV+++ S DILISN+T RDSPFWT+HP C+NV +++
Sbjct: 165 DGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCRNVVVKDM 224
Query: 252 AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
++ + DS + + IEDCYISVGDDAIAIKSGWD+YG AYG PS +I IR
Sbjct: 225 TLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRR 284
Query: 305 LVVRS 309
+VV S
Sbjct: 285 IVVHS 289
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/248 (52%), Positives = 165/248 (66%), Gaps = 8/248 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R +T++G VGDG TLNT AF RAV +++ GG L VPPG+WLT PFNLT
Sbjct: 38 PGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLT 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S TL+L + AEILA ++ K+WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG N
Sbjct: 98 SCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKN 157
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTINGQGQ WW K+ K L TRG L+++++S +I+ISN+T D+P+W LHP C NVTI
Sbjct: 158 GTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTI 217
Query: 250 RNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
I + DS + IEDCYI GDD +A+KSGWD+YGI + PS +I+
Sbjct: 218 SGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIV 277
Query: 302 IRNLVVRS 309
IR L S
Sbjct: 278 IRRLTCVS 285
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 165/246 (67%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + ++TDFGGVGDG TLNT+AF++A+ +S+ GG QL VPPGRWLT FNLTSH
Sbjct: 38 CRAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLF+ DA IL ++E WP++ PLPSYG GR+ G RF S I G +L DV+ITG NGT
Sbjct: 98 FTLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
++GQG WWKK+ K L TR L++IM+S ++ ISN+TL +SP W +HP C NV ++
Sbjct: 158 LDGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQG 217
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSC + IEDCYI GDD +A+KSGWD+YGI+YG P+ +++IR
Sbjct: 218 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIR 277
Query: 304 NLVVRS 309
L S
Sbjct: 278 RLTCIS 283
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 167/243 (68%), Gaps = 8/243 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP GRWLT F+L SH
Sbjct: 38 IRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+TL+L DA IL N WP++ PLPSYG GRE G R S I+G+NL DV+ITG NGT
Sbjct: 98 LTLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW +R + LN TR LV+ M ++ ++ISN+T +SPFWT+HP C V ++N
Sbjct: 158 IDGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQN 217
Query: 252 AFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I + DS +D+ +EDCY+S GDD IAIKSGWD+YG++YGRPS NI IR
Sbjct: 218 VTILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIR 277
Query: 304 NLV 306
LV
Sbjct: 278 RLV 280
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 168/246 (68%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH
Sbjct: 38 IRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+TL+L DA IL N WP++ PLPSYG GRE G R S I+G NL DV++TG NGT
Sbjct: 98 LTLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW +++K LN TR LV+ + S+ ++ISN+T +SPFWT+HP C V I+N
Sbjct: 158 IDGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQN 217
Query: 252 AFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I + DS D+ IEDCYIS GDD IAIKSGWD+YGI+Y RPS NI+IR
Sbjct: 218 VTILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIR 277
Query: 304 NLVVRS 309
LV ++
Sbjct: 278 RLVGKT 283
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 168/244 (68%), Gaps = 10/244 (4%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG--KKGGGQLNVPPGRWLTAPFNLTS 130
RP + ++ DFG +GDGVTLNT AFQ A++ +S + KGG L VP GRWLT FNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H TL+L A IL ++ WP++ PLPSYG GRE G R S +HG+NL+DVVITG NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW+ + LLN+TRG LV+ + S++I+ISN+TL +SPFWTLHP C NV I+
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I Q DS ++ I+DCYIS GDD IAIKSGWD+YGIAYG+PS NI I
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 303 RNLV 306
R +
Sbjct: 265 RRVT 268
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 168/244 (68%), Gaps = 10/244 (4%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG--KKGGGQLNVPPGRWLTAPFNLTS 130
RP + ++ DFG +GDGVTLNT AFQ A++ +S + KGG L VP GRWLT FNLTS
Sbjct: 25 RPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFNLTS 84
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H TL+L A IL ++ WP++ PLPSYG GRE G R S +HG+NL+DVVITG NG
Sbjct: 85 HFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITGENG 144
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW+ + LLN+TRG LV+ + S++I+ISN+TL +SPFWTLHP C NV I+
Sbjct: 145 TIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQ 204
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I Q DS ++ I+DCYIS GDD IAIKSGWD+YGIAYG+PS NI I
Sbjct: 205 GVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHI 264
Query: 303 RNLV 306
R +
Sbjct: 265 RRVT 268
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 161/240 (67%), Gaps = 9/240 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG VGDG T NT AF++A+ +S++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 47 LTDFGAVGDGKTSNTNAFKKAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGP-RFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A ILA ++E WP++ PLPSYG GR+ G RF S I G NL DVVITG+NGTINGQGQ
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW K+++K TR L+++++S +I ISNITL DSP W +HP C NV +++ +
Sbjct: 167 YWWDKFKKKQFKLTRPYLIELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAP 226
Query: 258 QLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + +IEDCYI GDD IA+KSGWDQYGI +G P+ + IR L S
Sbjct: 227 VTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCIS 286
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 164/246 (66%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + ++TDFGGVGDG TLNT+AF++A+ +S+ GG QL VPPGRWLT NLTSH
Sbjct: 38 CRAYSASVTDFGGVGDGTTLNTQAFRKAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLF+ DA IL ++E WP++ PLPSYG GR+ G RF S I G +L DV+ITG NGT
Sbjct: 98 FTLFIHKDAVILGSQDENEWPVIDPLPSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
++GQG WWKK+ K L TR L++IM+S ++ ISN+TL +SP W +HP C NV ++
Sbjct: 158 LDGQGDLWWKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQG 217
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSC + IEDCYI GDD +A+KSGWD+YGI+YG P+ +++IR
Sbjct: 218 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIR 277
Query: 304 NLVVRS 309
L S
Sbjct: 278 RLTCIS 283
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/247 (54%), Positives = 163/247 (65%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++TDFGGVGDG TLNT+AF+ AVY I L ++GG L VPPG +LT FNLTS
Sbjct: 67 RYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNLTS 126
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A + WPL+ PLPSYG GRE G R+ SFIHG L DVVITG NG
Sbjct: 127 HMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENG 186
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW +RQ+ L TR LV+ + S DI+ISN+ ++SPFW +HP C NV +R
Sbjct: 187 TIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVR 246
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS I I
Sbjct: 247 YVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITI 306
Query: 303 RNLVVRS 309
R L S
Sbjct: 307 RRLTGSS 313
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 162/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L +FGGVGDG TLNT+AFQ A+ +S+ GG QL VPPG+WLT FNLTSH
Sbjct: 63 CRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSH 122
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA ILA ++E WP++ PLPSYG GR+ G RF S I G NL DV+ITG NGT
Sbjct: 123 FTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGT 182
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+K+ + L TR LV+IM+S ++ ISN+TL +SP W +HP NV ++
Sbjct: 183 IDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQG 242
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSC D IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR
Sbjct: 243 ITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 302
Query: 304 NLVVRS 309
L S
Sbjct: 303 RLTCIS 308
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/257 (49%), Positives = 170/257 (66%), Gaps = 8/257 (3%)
Query: 61 RWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
+W R + +++DFGGVGDG T+NTEAFQ A+ +S+ +GG L VPPGR
Sbjct: 28 KWDCFEYAAVSCRAHSASVSDFGGVGDGTTVNTEAFQAAIDHLSQFSSEGGSLLYVPPGR 87
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLT FNLTS+ TL+L DA +LA ++E +PL+ PLPSYG GR+ G R+ S I G NL
Sbjct: 88 WLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNL 147
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
DV+ITG NGTI+GQG+ WW K+R LN+TR L++IM+S++I ISN+TL +SP W +H
Sbjct: 148 TDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNIQISNLTLINSPSWNVH 207
Query: 241 PYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P C NV ++ I + DSC + I+DCYI GDD +A+KSGWD+YGIA
Sbjct: 208 PVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIA 267
Query: 293 YGRPSMNILIRNLVVRS 309
+G P+ ++IR L S
Sbjct: 268 FGMPTKQVVIRRLTCIS 284
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 165/250 (66%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R + LTDFGGVGDG T NT+AFQ A+ +S++ GG QL VPPG+WLT FN
Sbjct: 44 PAINCRKHSAVLTDFGGVGDGKTSNTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFN 103
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA ILA ++E WP +P LPSYG GR+ G RF S I G +L DVVITG
Sbjct: 104 LTSHFTLFLHKDAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITG 163
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
HNGTI+GQG WW K+ + LN TR +++IM+S I ISN+TL +SP W +HP N+
Sbjct: 164 HNGTIDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNI 223
Query: 248 TIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
TI+ I + DSC + IEDCYI GDD +A+KSGWD+YGI +G+P+ +
Sbjct: 224 TIKGLTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQH 283
Query: 300 ILIRNLVVRS 309
++IR L S
Sbjct: 284 LVIRRLTCIS 293
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/247 (53%), Positives = 166/247 (67%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++TDFGGVGDG T+NT+AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 35 RYRYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTS 94
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A+++ WPL+ PLPSYG GRE G R+ SFIHG L+DVVITG NG
Sbjct: 95 HMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNG 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG+ WW +R + L TR L++ S +I+ISN+ ++SPFW +HP C NV I
Sbjct: 155 TIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIH 214
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ I Q DS ++ IED YIS GDD +AIKSGWDQYGIAYGRPS NI I
Sbjct: 215 HVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITI 274
Query: 303 RNLVVRS 309
R + S
Sbjct: 275 RRITGSS 281
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/240 (52%), Positives = 161/240 (67%), Gaps = 9/240 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG VGDG T NT+AF+ A+ +S++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 47 LTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGP-RFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A ILA ++E WP++ PLPSYG GR+ G RF S I G NL DVVITG+NGTINGQGQ
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW K+++K TR L++I++S +I ISNITL DSP W +HP C +V +++ +
Sbjct: 167 YWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAP 226
Query: 258 QLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + +IEDCYI GDD IA+KSGWDQYGI +G P+ + IR L S
Sbjct: 227 VTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCIS 286
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 163/247 (65%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++TDFGGVGDG TLNT+AF+ AVY I L ++GG L VPPG +LT FNLTS
Sbjct: 35 RYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYLTESFNLTS 94
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A + WPL+ PLPSYG GRE G R+ SFIHG L DVVITG NG
Sbjct: 95 HMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSDVVITGENG 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW +RQ+ L TR LV+ + S DI+ISN+ ++SPFW +HP C NV +R
Sbjct: 155 TIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVR 214
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS I I
Sbjct: 215 YVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITI 274
Query: 303 RNLVVRS 309
R + S
Sbjct: 275 RRVTGSS 281
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/246 (51%), Positives = 163/246 (66%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L +FGGVGDG TLNT+AFQ A+ +S+ GG QL VPPG+WLT FNLTSH
Sbjct: 38 CRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA ILA ++E WP++ PLPSYG GR+ G RF S I G NL DV+ITG NGT
Sbjct: 98 FTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+K+R+ L TR L++IM+S ++ ISN+TL +SP W +HP N+ ++
Sbjct: 158 IDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQG 217
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSC + IEDCYI GDD +A+KSGWD+YGIAYG P+ ++IR
Sbjct: 218 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 277
Query: 304 NLVVRS 309
L S
Sbjct: 278 RLTCIS 283
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 170/246 (69%), Gaps = 9/246 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++++FG VGDG TLNT AF+ A++ + KGG QL +P GRWLT L SH+
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG-HNGT 191
TLFL ++A IL ++ K +P++P LPSYG GRE GPR S I+G+ L+DVVITG NGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW + K L+ TRG LV+++ SSDILISN+T RDSPFWT+HP C+NV +++
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 252 AFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I + DS ++ IEDCYISVG DAIAIKSGWD+YG +YG PS +I +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 304 NLVVRS 309
+ V S
Sbjct: 241 RITVHS 246
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG T NT+AFQ A+ + + GG QL VPPG+WLT PFNLTSH TLFL
Sbjct: 54 LTDFGGVGDGKTSNTKAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHK 113
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA ILA + E WP +P LPSYG GR+ G RF S I G +L DVVITGHNGTI+GQG
Sbjct: 114 DAVILASQVESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSY 173
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
WW K+ + LN TR +++IM+S I ISN+TL +SP W +HP N+TI+ I
Sbjct: 174 WWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 233
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC + IEDCYI GDD +A+KSGWD+YGI +G+P+ +++IR L S
Sbjct: 234 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCIS 292
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 164/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP ++TDFG VGDG TLNT+AF+ A+ + G QL +P GRWLT NL SH+
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A IL E+ +P++P LPSYG GRE G R+ S I+G NL+DV ITG NGTI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WWK +R K L+ +R +++++ S DILI N+T ++SP WT+HP CKNV I+N
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DS + + IEDCYISVGDDAI+IKSGWDQYGI+YG PS +I IR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 305 LVVRS 309
+V S
Sbjct: 259 IVSAS 263
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 160/240 (66%), Gaps = 9/240 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ-LNVPPGRWLTAPFNLTSHMTLFLA 137
+T++G VGDG TLNT AF RAV +S+ GGG L VP G+WLT PFNLTSH TLFL
Sbjct: 45 ITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTSHFTLFLH 104
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
AEILA ++ WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG NGTINGQGQ
Sbjct: 105 RGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNGTINGQGQ 164
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--- 254
WW KY K L TRG L+++++S DI+ISN+T D+P W LHP C NVTI I
Sbjct: 165 VWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAP 224
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DS + IEDCYI GDD IA+KSGWD+YGI + PS +I++R L S
Sbjct: 225 VHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCIS 284
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 158/243 (65%), Gaps = 8/243 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R RP ++ +FGGVGDG T+NT AF +AVY I ++GG L VP G WLT FNLTS
Sbjct: 37 RPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTS 96
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTLFLA A + A + + WPL PLPSYG GRE G R+ SFIHG L+D+VITG G
Sbjct: 97 HMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKG 156
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I+GQG WW +RQ+ L +TR L++ M SS I ISNI L++SPFW +HP C NV I
Sbjct: 157 IIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVIT 216
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS I I
Sbjct: 217 NMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITI 276
Query: 303 RNL 305
R +
Sbjct: 277 RRV 279
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 166/245 (67%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP +F++ DFG VGDG TLNT AF+RA+ ++S KGG +L +P GRWLT L SH+
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL E+ +PL+P LPSYG GRE G R+ S I+G L+DV+ITG+NGTI
Sbjct: 141 TLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTI 200
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R K L +TRG L++++ + DILISN+T ++SPFWT+HP KNV ++
Sbjct: 201 DGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRV 260
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS + + IEDCYISVGDDAI+IKSGWDQYG +G PS I I+
Sbjct: 261 TILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQR 320
Query: 305 LVVRS 309
+V S
Sbjct: 321 VVAFS 325
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/243 (54%), Positives = 157/243 (64%), Gaps = 8/243 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R RP ++ +FGGVGDG T+NT AF +AVY I ++GG L VP G WLT FNLTS
Sbjct: 37 RPRPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTS 96
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTLFLA A + A + + WPL PLPSYG GRE G R+ SFIHG L DVVITG G
Sbjct: 97 HMTLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKG 156
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I+GQG WW +RQ+ L +TR L++ M SS I ISNI L++SPFW +HP C NV I
Sbjct: 157 IIDGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVIT 216
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS I I
Sbjct: 217 NMMIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITI 276
Query: 303 RNL 305
R +
Sbjct: 277 RRV 279
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 163/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R +T++G VGDG TLNT AF +AV +S + GG L VPPG+WLT PFNLTS
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L + AEILA ++ +WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQGQ WW K+ K L +TRG L++++ S +I+ISN+T D+P+W LHP C NVTI
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS + IEDCYI GDD +A+KSGWD+YGI + PS +I+IR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 305 LVVRS 309
L S
Sbjct: 281 LTCIS 285
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 168/249 (67%), Gaps = 12/249 (4%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++ DFGGVGDG TLNT+AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 37 RHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTS 96
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+L+ DA I A ++ WPL+ PLPSYG GRE G R+ SFIH + DV+ITG NG
Sbjct: 97 HMTLYLSKDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENG 156
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG+ WW +RQ+ L TR L++++ S +I+ISN+ RDSPFW +HP C+NV ++
Sbjct: 157 TIDGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQ 216
Query: 251 NAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
F++ + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS I
Sbjct: 217 --FVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGI 274
Query: 301 LIRNLVVRS 309
IR + S
Sbjct: 275 TIRRITGSS 283
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/280 (49%), Positives = 169/280 (60%), Gaps = 12/280 (4%)
Query: 42 FASVFIWQRNAVVGGFSFLRWGVASRPIPR----LRPAAFNLTDFGGVGDGVTLNTEAFQ 97
A I Q V + GVA+ P R +T++GGVGDG NT AF
Sbjct: 1 MAKKTILQVVCAVALVALCACGVAASPSSPAGAGCRKHVARITEYGGVGDGRRSNTAAFA 60
Query: 98 RAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPL 157
+AV +S GG L VP G+WLT PFNLTSH TLFL AEILA +N + WPL+ PL
Sbjct: 61 KAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSHFTLFLDHGAEILASQNLEDWPLIAPL 120
Query: 158 PSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQ 217
PSYG GR+ GPR+ +FI G NL DV+ITG NGTINGQGQ WW K+ K L TRG L++
Sbjct: 121 PSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTINGQGQVWWDKFHAKELTYTRGYLLE 180
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIE 269
+++S++I+ISN+T DSP W LHP C NVTI I + DS + IE
Sbjct: 181 LLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPNTDGIDPDSSSHVKIE 240
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D YI GDD IA+KSGWDQYGI + PS +ILIR L S
Sbjct: 241 DSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCIS 280
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/265 (49%), Positives = 169/265 (63%), Gaps = 18/265 (6%)
Query: 63 GVASRPIPRL----------RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG 112
GV SR P+L R +L DFGGVGDG T NT+AFQ A+ +S+ GG
Sbjct: 29 GVDSRKRPKLACFEYAAISCRAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGS 88
Query: 113 QLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG 172
QL VPPG+WLT FNLTSH TLFL DA +LA ++E WP++ PLPSYG GR+ G R+
Sbjct: 89 QLYVPPGKWLTGSFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYS 148
Query: 173 SFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLR 232
S I G NL DVVITG NGTI+GQG WWKK+ +N TR L++IM+S++I ISN+TL
Sbjct: 149 SLIFGTNLTDVVITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLM 208
Query: 233 DSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
+SP W +HP NV ++ I + DSC + IEDCYI GDD +A+KS
Sbjct: 209 NSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
Query: 285 GWDQYGIAYGRPSMNILIRNLVVRS 309
GWD+YGI++G P+ ++IR L S
Sbjct: 269 GWDEYGISFGMPTKQLVIRRLTCIS 293
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/243 (54%), Positives = 166/243 (68%), Gaps = 8/243 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP GRWLT F+L SH
Sbjct: 48 IRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISH 107
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+TL+L +A IL N WP++ LPSYG GRE G R S I+G+NL DVVITG NGT
Sbjct: 108 LTLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITGDNGT 167
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC-----KN 246
I+GQG WW ++ + LN TR LV++M SS I+ISN+T +SPFWT+HP C +N
Sbjct: 168 IDGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKVIVQN 227
Query: 247 VTIRNAFISKIQLF---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
VTIR S DS +D+ IEDC+IS GDD IAIKSGWD+YGI YGRP NI IR
Sbjct: 228 VTIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIR 287
Query: 304 NLV 306
LV
Sbjct: 288 RLV 290
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 165/247 (66%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++TD+GGVGDG T+NT+AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 35 RYRYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTS 94
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMT +LA A I A+++ WPL+ PLPSYG GRE G R+ SFIHG L+DVVITG NG
Sbjct: 95 HMTFYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNG 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG+ WW +R + L TR L++ S +I+ISN+ ++SPFW +HP C NV I
Sbjct: 155 TIDGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIH 214
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ I Q DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS NI I
Sbjct: 215 HVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITI 274
Query: 303 RNLVVRS 309
R + S
Sbjct: 275 RRITGSS 281
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/259 (50%), Positives = 171/259 (66%), Gaps = 12/259 (4%)
Query: 56 GFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLN 115
G S +WG + +RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG +L
Sbjct: 19 GNSHCQWGNPAV----IRPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLF 74
Query: 116 VPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
VP G+WLT F+L SH+TL+L DA IL N WP++ LPSYG GRE G R S I
Sbjct: 75 VPAGQWLTGSFDLISHLTLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLI 134
Query: 176 HGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSP 235
+G+NL DV+ITG NGTI+GQG WW +R + L+ TR LV++M ++ ++ISN+T +SP
Sbjct: 135 YGRNLTDVIITGDNGTIDGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSP 194
Query: 236 FWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FWT+HP C V ++N I + DS +D+ IEDCYIS GDD IAIKSGWD
Sbjct: 195 FWTIHPVYCSQVIVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWD 254
Query: 288 QYGIAYGRPSMNILIRNLV 306
+YG +Y RPS NI IR LV
Sbjct: 255 EYGTSYARPSKNITIRGLV 273
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 164/241 (68%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++ +FG VGDG T NT AF+RAV + GG +L VPPGRWLT FNLTS
Sbjct: 91 RAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARLEVPPGRWLTGSFNLTSRF 150
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ + WPL+ PLPSYG GRE GPR S IHG+ L DVVITG NGTI
Sbjct: 151 TLFLHRGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTI 210
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-- 250
+GQG WW+ + + LN+TRG L++++ S++ILIS+ITLR+SPFWT+HP C NV ++
Sbjct: 211 DGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDL 270
Query: 251 ------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
NA + DS ++ IEDCYI GDD +A+KSGWDQYGI+ G+PS NI+I+
Sbjct: 271 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQR 330
Query: 305 L 305
+
Sbjct: 331 V 331
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 15/279 (5%)
Query: 39 LAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQR 98
L F +V + R +V +W R + +++DFGGVGDG T NT+AFQ
Sbjct: 22 LVLFYTVGVESRKSV-------KWDYFEYAALSCRAHSASVSDFGGVGDGTTANTKAFQA 74
Query: 99 AVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLP 158
A+ +S+ +GG L VPPGRWLT FNLTS+ TL+L DA +LA ++E +PL+ PLP
Sbjct: 75 AIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLP 134
Query: 159 SYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQI 218
SYG GR+ G R+ S I G NL DV+ITG NGTI+GQG+ WW K+R LN TR L++I
Sbjct: 135 SYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNYTRPYLIEI 194
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIED 270
M+S++I ISN+TL +SP W +HP C NV ++ I + DSC + IED
Sbjct: 195 MFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTRIED 254
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
CYI GDD +A+KSGWD+YGI++G P+ ++IR L S
Sbjct: 255 CYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCIS 293
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 159/239 (66%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG T NT+ FQ A+ +SK GG QL +P G+WLT FNLTSH TLFL
Sbjct: 55 LTDFGGVGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHK 114
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
+A +LA ++E WP++PPLPSYG GR+ G RF S I G NLKDVVITG+NGTI+GQG
Sbjct: 115 EAVLLASQDEAEWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGAT 174
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
WW K+ + LLN TR L+++++S I ISN+ L +SP W +HP NV I+ I
Sbjct: 175 WWNKFHKGLLNQTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPV 234
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC + IEDCYI GDD IA+KSGWDQYGI +G P+ ++IR L S
Sbjct: 235 DSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCIS 293
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 162/250 (64%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P P R ++ FGG GDG TLNT AF AV +I + GGG L VPPG WLT PFN
Sbjct: 37 PAPPKRGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFN 96
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSHMTLFL+ A I A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV ITG
Sbjct: 97 LTSHMTLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITG 156
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW +++ L TR L+++M SSD+++SN+ RDSPFW +HP C NV
Sbjct: 157 ANGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNV 216
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
IRN I DS ++ IEDCYIS GDD +AIKSGWD+YGIAYGRPS +
Sbjct: 217 VIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSD 276
Query: 300 ILIRNLVVRS 309
I +R + S
Sbjct: 277 ITVRRITGSS 286
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 159/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R +LTDFGGVGDG T NT AF+ AV +S+ +GGG L VP G+WLT PFN
Sbjct: 51 PSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFN 110
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA IL ++ WP++ PLPSYG GR+ G R+ S I G NL DVVITG
Sbjct: 111 LTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITG 170
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ L TRG L+++M S ++ISN+TL +SP W +HP N+
Sbjct: 171 ANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNI 230
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGIAYG PS +
Sbjct: 231 VVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQH 290
Query: 300 ILIRNLVVRS 309
I++R L S
Sbjct: 291 IVVRRLTCVS 300
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 161/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +LTDFGGVGDG T NT+AFQ A+ +S+ GG QL VPPGRWLT FNLTSH
Sbjct: 48 CRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSH 107
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++E WP++ PLPSYG GR+ G R+ S I G NL DVVITG NGT
Sbjct: 108 FTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGT 167
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW K+ + L TR L++IM S ++ IS++TL +SP W +HP NV I+
Sbjct: 168 IDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQG 227
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ DSC + IEDCYI GDD IA+KSGWD+YGIAYG P+ ++IR
Sbjct: 228 LTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIR 287
Query: 304 NLVVRS 309
L S
Sbjct: 288 RLTCIS 293
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 165/247 (66%), Gaps = 8/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++T++GGVGDG T+NT+AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 35 RYRYDKISITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTS 94
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A+++ WPL+ PLPSYG GRE G R+ SFIHG L+DVVITG NG
Sbjct: 95 HMTLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNG 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG+ WW + + L TR L++ S +I+ISN+ ++SPFW +HP C NV I
Sbjct: 155 TIDGQGEVWWNMWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIH 214
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ I Q DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS NI I
Sbjct: 215 HVTILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITI 274
Query: 303 RNLVVRS 309
R + S
Sbjct: 275 RRITGSS 281
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 161/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +LTDFGGVGDG T NT+AFQ A+ +S+ GG QL VPPGRWLT FNLTSH
Sbjct: 48 CRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSH 107
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++E WP++ PLPSYG GR+ G R+ S I G NL DVVITG NGT
Sbjct: 108 FTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGT 167
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW K+ + L TR L++IM S ++ IS++TL +SP W +HP NV I+
Sbjct: 168 IDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQG 227
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ DSC + IEDCYI GDD IA+KSGWD+YGIAYG P+ ++IR
Sbjct: 228 LTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIR 287
Query: 304 NLVVRS 309
L S
Sbjct: 288 RLTCIS 293
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/251 (52%), Positives = 165/251 (65%), Gaps = 12/251 (4%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKL-GKKGGGQLNVPPGRWLTA 124
S P P LR A ++ FG GDG TLNT AF RAV I + G +GG L VPPG WLT
Sbjct: 28 SGPAP-LRGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTLLYVPPGVWLTG 86
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
PFNLTSHMTLFLA A I A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV
Sbjct: 87 PFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGNGLQDVF 146
Query: 185 ITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
ITG NGTI+GQG WW ++++ L TR L+++M+S+D+++SN+ +DSPFW +HP C
Sbjct: 147 ITGENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYC 206
Query: 245 KNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
NV I N + I L DS ++ IED YIS GDD I+IKSGWD+YGIA+GR
Sbjct: 207 SNVVIANVTVLAPHDSPNTDGIDL-DSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGR 265
Query: 296 PSMNILIRNLV 306
PS I IR +
Sbjct: 266 PSSGITIRRIT 276
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 162/239 (67%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFGGVGDGVT NT+AF+RA+ +S L GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 56 ITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHK 115
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA+IL +NE WP + LPSYG GR+ G R+ S I G NL DVVITG+NGTI+GQG
Sbjct: 116 DAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAY 175
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKI 257
WW K+ + LN TR L++IM+S I IS++TL +SP W +HP KNV I+ ++ I
Sbjct: 176 WWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPI 235
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + IEDC+I GDD IA+KSGWDQYGI +G P+ +++I+ L S
Sbjct: 236 DSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCIS 294
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/250 (52%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R +L +FGGVGDG T NT AF+ AV +S+ GGG L VP GRWLTAPFN
Sbjct: 66 PACREHTASLAEFGGVGDGTTSNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFN 125
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA ILA +N WP++ PLPSYG GR+H G R+ S I G NL DVVITG
Sbjct: 126 LTSHFTLFLHSDAVILASQNISEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITG 185
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+NGTI+GQG WW KY+ L TRG L+++M S I ISN+TL +SP W +HP KN+
Sbjct: 186 NNGTIDGQGATWWSKYKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNI 245
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I+ I DSC + IEDCY+ GDD +AIKSGWD+YGIA G P+ +
Sbjct: 246 VIQGVTILAPTRSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEH 305
Query: 300 ILIRNLVVRS 309
+++R L S
Sbjct: 306 VIVRRLTCVS 315
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 163/250 (65%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R + LTDFGGVGDG TLNT+AF A+ +S+ GG QL VPPG+WLT FN
Sbjct: 55 PAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFN 114
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA ILA + E WP +P LPSYG GRE G RF S I G NL DV+ITG
Sbjct: 115 LTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITG 174
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+NGTI+GQG WW K+++K L TR +++IM+S I ISN+TL +SP W +HP N+
Sbjct: 175 NNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNI 234
Query: 248 TIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I ++ + + DS +++IED YI GDD IAIKSGWD+YGI G+PS N
Sbjct: 235 IINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQN 294
Query: 300 ILIRNLVVRS 309
I++R L S
Sbjct: 295 IIVRRLTCIS 304
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 167/254 (65%), Gaps = 9/254 (3%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+ R +P+ RP + ++TDFG VGDG +NT AFQ A++ + KGG QL VP GRWLT
Sbjct: 50 CSPRSLPK-RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLT 108
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
FNLTSH+TLFL + A IL ++ WP++P LPSYG GRE G R S IHG+N+ DV
Sbjct: 109 GSFNLTSHLTLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDV 168
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
VITG NGTI+GQG WW + K L+ TRG LV+++ S I ISN+T ++SPFWT+HP
Sbjct: 169 VITGANGTIDGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVY 228
Query: 244 CKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
C +V I++ I DS ++ I DCYIS GDD I+IKSGWD++GI YG
Sbjct: 229 CSDVLIQDVTILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGM 288
Query: 296 PSMNILIRNLVVRS 309
PS N+ I N+ +S
Sbjct: 289 PSTNVCIHNVSGQS 302
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 170/243 (69%), Gaps = 10/243 (4%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFNLTS 130
R A+ ++ +FG VGDGVT NT AF+RAV A+ + GG L VPPGRWLT FNLTS
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
TLFL A IL ++ + WPL+ PLPSYG GRE GPR S IHG+NL DVVITG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG+ WW+ + + LN+TRG L++++ S++++ISN+TLR+SPFWT+HP C+NV I+
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 251 --------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
NA + DS D+ IEDCYI GDD +AIKSGWDQYGI+ +PS NI+I
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 303 RNL 305
+ +
Sbjct: 313 QRV 315
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 167/247 (67%), Gaps = 12/247 (4%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++TDFG VGDG TLNT AF+ A++ + GG QL +P G WLT L SH+
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A IL E+ +P++P LPSYG GRE GPRF S I+G L+DV+ITG N TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R+K LN TRG +++++ S +ILISN+T ++SPFWT+HP CKNV +++
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 253 FISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I + F DS + + IEDCYISVGDDAI+IKSGWDQ+G ++ PS +I +
Sbjct: 181 TI--LNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKV 238
Query: 303 RNLVVRS 309
+ ++ S
Sbjct: 239 QRILAFS 245
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/241 (54%), Positives = 170/241 (70%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++ +FG VGDGVT NT AFQRAV A+ + G GG +L VP GRWLT FNLTS
Sbjct: 75 RAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSFNLTSRF 134
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ + WPL+ PLPSYG GRE GPR S IHGQ+L DVVITG NGTI
Sbjct: 135 TLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVITGSNGTI 194
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-- 250
+GQG+ WW+ + + LN+TRG L++++ S+++LISN+TLR+SPFWT+HP C+NV I+
Sbjct: 195 DGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDL 254
Query: 251 ------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
NA + DS ++ IEDCYI GDD +A+KSGWDQYGI+ G+PS NI+I+
Sbjct: 255 TILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 314
Query: 305 L 305
+
Sbjct: 315 V 315
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/246 (52%), Positives = 160/246 (65%), Gaps = 9/246 (3%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+PR R A ++ FGGVGDG LNT AF RAV I + +GG L VP G WLT PFNL
Sbjct: 41 VPR-RGAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNL 99
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
TSHMTLFLA A I A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV ITG
Sbjct: 100 TSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGE 159
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
NGTI+GQG WW +R++ L TR L++++ S+D++ISN+ +DSPFW +HP C NV
Sbjct: 160 NGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVV 219
Query: 249 IRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
I N + DS ++ IED YIS GDD I+IKSGWD+YGIA+GRPS I
Sbjct: 220 ITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGI 279
Query: 301 LIRNLV 306
IR +
Sbjct: 280 TIRRIT 285
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 9/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LT+FGG+GDG T NT+AF+ A+ + + GG +L VPPG+WLT FNLTSH TL++
Sbjct: 8 LTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTLYIHK 67
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA IL + E +P +PPLPSYG GR+ G RF S I G NL DVVI G NGTINGQG+
Sbjct: 68 DAVILGSQEESDYPHIPPLPSYGKGRDGGG-RFSSLIFGTNLTDVVIIGGNGTINGQGRV 126
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKI 257
WW K++QK L +TR L++IM+S + ISN+TL DSP W +HP C +V I+ ++ +
Sbjct: 127 WWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPV 186
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC ++ IEDCYI GDD IA+KSGWDQYGI YG P+ +I+IR L S
Sbjct: 187 DVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCIS 245
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/245 (51%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++TDFG VGDG +NT AFQ A++ + KGG QL VP GRWLT FNLTSH+
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A IL ++ WP++P LPSYG GRE G R S IHG+N+ DVVITG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + K L+ TRG LV+++ S I ISN+T ++SPFWT+HP C +V I++
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS ++ I DCYIS GDD I+IKSGWD++GI YG PS N+ I N
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 305 LVVRS 309
+ +S
Sbjct: 241 VSGQS 245
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/245 (51%), Positives = 164/245 (66%), Gaps = 13/245 (5%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG VGDG T NT+AF+ A+ +S++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 47 LTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGP-RFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A ILA ++E WP++ PLPSYG GR+ G RF S I G NL DVVITG+NGTINGQGQ
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW K+++K TR L++I++S +I ISNITL DSP W +HP C +V +++ +
Sbjct: 167 YWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAP 226
Query: 258 QLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGI--AYGRPS--MNILIRNL 305
DSC + +IEDCYI GDD IA+KSGWDQYGI A GR + +I R +
Sbjct: 227 VTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKTAVGRGAYVKDIYARRI 286
Query: 306 VVRSM 310
+++M
Sbjct: 287 TMKTM 291
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/251 (50%), Positives = 162/251 (64%), Gaps = 18/251 (7%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L DFGGVGDG TLNT+AFQ AV +SK G +GG QL VP G+WLT F+LTSH
Sbjct: 58 CRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSH 117
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ WP++ PLPSYG GR+ R+ S I G NL DV+ITG NGT
Sbjct: 118 FTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGT 177
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+++ L TR L+++M+S+DI ISN+TL +SP W +HP V RN
Sbjct: 178 IDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP-----VYSRN 232
Query: 252 AFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
I I + DSC + IEDCYI GDD +A+KSGWD+YGIAYG P+
Sbjct: 233 ILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 292
Query: 299 NILIRNLVVRS 309
++IR L S
Sbjct: 293 QLVIRRLTCIS 303
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/242 (52%), Positives = 157/242 (64%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R A ++ FGGVGDG LNT AF RAV I + +GG L VP G WLT PFNLTSHM
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFLA A I A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV ITG NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTI 163
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R++ L TR L++++ S+D++ISN+ +DSPFW +HP C NV I N
Sbjct: 164 DGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNV 223
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DS ++ IED YIS GDD I+IKSGWD+YGIA+GRPS I IR
Sbjct: 224 TVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRR 283
Query: 305 LV 306
+
Sbjct: 284 IT 285
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 161/239 (67%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFGGVGDGVT NT+AF+RA+ +S L GG QL VP G+WLT FNLTSH TLF+
Sbjct: 56 ITDFGGVGDGVTSNTQAFRRAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHK 115
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA+IL +NE WP + LPSYG GR+ G R+ S I G NL DVVITG+NGTI+GQG
Sbjct: 116 DAKILGSQNESEWPQVALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAY 175
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKI 257
WW K+ + LN TR L++IM+S I IS++TL +SP W +HP KNV I+ ++ I
Sbjct: 176 WWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPI 235
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + IEDC+I GDD IA+KSGWDQYGI +G P+ +++I+ L S
Sbjct: 236 DSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCIS 294
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/251 (50%), Positives = 162/251 (64%), Gaps = 18/251 (7%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L DFGGVGDG TLNT+AFQ AV +SK G +GG QL VP G+WLT F+LTSH
Sbjct: 46 CRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSH 105
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ WP++ PLPSYG GR+ R+ S I G NL DV+ITG NGT
Sbjct: 106 FTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGT 165
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+++ L TR L+++M+S+DI ISN+TL +SP W +HP V RN
Sbjct: 166 IDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP-----VYSRN 220
Query: 252 AFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
I I + DSC + IEDCYI GDD +A+KSGWD+YGIAYG P+
Sbjct: 221 ILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTK 280
Query: 299 NILIRNLVVRS 309
++IR L S
Sbjct: 281 QLVIRRLTCIS 291
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 159/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKK--GGGQLNVPPGRWLTAPFN 127
P R +L DFGGVGDG T NT AF+ AV +S+ + GG L VP G+WLT PFN
Sbjct: 54 PACRAHTASLADFGGVGDGTTSNTAAFRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFN 113
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA ILA ++ WP++ PLPSYG GR+ G RF S + G NL DVVITG
Sbjct: 114 LTSHFTLFLHSDAVILASQDINEWPIIDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITG 173
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+NGTI+GQG WW K+ + L TRG L+++M S I ISN+TL +SP W +HP N+
Sbjct: 174 NNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNI 233
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGI+YG PS +
Sbjct: 234 VVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQH 293
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 294 IVIRRLTCVS 303
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/281 (50%), Positives = 178/281 (63%), Gaps = 24/281 (8%)
Query: 33 LFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIP-RLRPAAFNLTDFGGVGDGVTL 91
L+T W+ + + N V+ S +P + R +LTDFGGVGDG TL
Sbjct: 13 LYTCCWVCVLS-----ENNEVI---------TCSNIVPLKYRTDNISLTDFGGVGDGHTL 58
Query: 92 NTEAFQRAVYAISKLGKK-GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
NT+AF+ A+Y I+ L ++ GG L VPPG +LT PFNLTSHMTL LA A I A ++
Sbjct: 59 NTKAFREAIYRINHLSQREGGTTLYVPPGVYLTEPFNLTSHMTLHLAAGAVIKATQDSSN 118
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN 210
WPL+ PLPSYG GRE G R+ SFIHG L+DVVITG NGTI+GQG WW +R++ L
Sbjct: 119 WPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQF 178
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DS 262
TR LV+ + S DI+ISN+ +DSPFW +HP C NV IR A I + DS
Sbjct: 179 TRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDS 238
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ IED YIS GDD +A+KSGWD+YGIAYGR S NI IR
Sbjct: 239 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIR 279
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/299 (46%), Positives = 178/299 (59%), Gaps = 24/299 (8%)
Query: 26 FLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGV 85
S+ F VL L A +V + G + G ++ P R +LTDFGGV
Sbjct: 1 MASAQILCFAVLLLLATTAVSARRHAPPQAGPA----GQSTYMAPNCREHTASLTDFGGV 56
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFNLTSHMTLFLADDAEIL 143
GDG T NT AF++AV +S+ +GGG L VP GRWLTAPFNLTSH TLFL DA IL
Sbjct: 57 GDGNTSNTAAFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTSHFTLFLHADAVIL 116
Query: 144 AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY 203
++ WP++ PLPSYG GR+H G R+ S + G NL DVVITG+NGTI+GQG WW KY
Sbjct: 117 GTQDVAQWPVIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITGNNGTIDGQGATWWSKY 176
Query: 204 RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--- 260
+ L TRG L+++M + + ISN+TL +SP W +HP V RN +S + +
Sbjct: 177 KSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHP-----VYSRNIVVSGVTILAPV 231
Query: 261 ----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + IEDCY+ GDD +AIKSGWD+YGIA G PS +I +R L S
Sbjct: 232 KSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVS 290
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 168/245 (68%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++T+FGGVGDG TLNT+AF+ A+Y + L ++GG L VPPG +LT PFNLTSHM
Sbjct: 39 RTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLTSHM 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+LA A I+A ++ WPL+ PLPSYG GRE G R+ SFIHG ++DVVITG NGTI
Sbjct: 99 TLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGENGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG AWW K+RQ L TR LV+ + S DI+ISN+ ++SPFW +HP C NV +R
Sbjct: 159 DGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVVVRYV 218
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS +I IR
Sbjct: 219 TILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRR 278
Query: 305 LVVRS 309
+ S
Sbjct: 279 ITGSS 283
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 159/242 (65%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DAEI+ + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 99 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S+D++ISN+T ++SPFW +HP C V +++
Sbjct: 159 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I+ CY+ GDD I IKSGWD+YGI++ RPS NI I N
Sbjct: 219 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 278
Query: 305 LV 306
+
Sbjct: 279 IT 280
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 159/242 (65%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 23 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 82
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DAEI+ + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 83 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 142
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S+D++ISN+T ++SPFW +HP C V +++
Sbjct: 143 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I+ CY+ GDD I IKSGWD+YGI++ RPS NI I N
Sbjct: 203 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 262
Query: 305 LV 306
+
Sbjct: 263 IT 264
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 166/246 (67%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R ++T+FGGVGDGVT NT+AFQ AV +S+ GG QL VP G+WLT FNLTSH
Sbjct: 61 CRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSH 120
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ WP++ PLPSYG+GR+ G R+ S I G NL DVVITG+NGT
Sbjct: 121 FTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGT 180
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+ + Q L TR L+++M+SSDI IS++TL +SP W +HP N+ I+
Sbjct: 181 IDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQG 240
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ ++ DSC ++ IEDCYI GDD +A+KSGWD+YGI++G P+ +++R
Sbjct: 241 ITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVR 300
Query: 304 NLVVRS 309
L S
Sbjct: 301 RLTCIS 306
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 166/246 (67%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R ++T+FGGVGDGVT NT+AFQ AV +S+ GG QL VP G+WLT FNLTSH
Sbjct: 61 CRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTGSFNLTSH 120
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ WP++ PLPSYG+GR+ G R+ S I G NL DVVITG+NGT
Sbjct: 121 FTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVVITGNNGT 180
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+ + Q L TR L+++M+SSDI IS++TL +SP W +HP N+ I+
Sbjct: 181 IDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQG 240
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ ++ DSC ++ IEDCYI GDD +A+KSGWD+YGI++G P+ +++R
Sbjct: 241 ITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVR 300
Query: 304 NLVVRS 309
L S
Sbjct: 301 RLTCIS 306
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 179/296 (60%), Gaps = 15/296 (5%)
Query: 24 PAFLSSHKTLFTVLWLAAFASVFIWQ-RNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDF 82
P+ L +T F +L + A +S + + R+ G + + + + R LT+F
Sbjct: 7 PSTLKMIRTSFCILVVLAISSFSMMEARDLGCKGKTNIEYMALN-----CRKHTAVLTEF 61
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI 142
G VGDG T NT+AF+ A+ ++ GG QL VPPG+WLT FNL+SH TLF+ A I
Sbjct: 62 GAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATI 121
Query: 143 LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK 202
LA ++E +P++ PLPSYG GR+ GP F S I G NL DVVITG+NGTINGQG+ WW K
Sbjct: 122 LASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVK 181
Query: 203 YRQKLLNN-TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQL- 259
YR N TR ++IM+S ++ ISNIT+ DSP W +HP C NV ++ I + I
Sbjct: 182 YRSGGFKNITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSP 241
Query: 260 ------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + +IEDCY+ GDD IA+KSGWDQ+GI G P+ + IR L S
Sbjct: 242 NTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCIS 297
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 159/239 (66%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG T NT+AF+ A+ +S+ GG QL VPPG+WLT FNL+SH TLFL
Sbjct: 34 LTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGSFNLSSHFTLFLHK 93
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA +LA ++E WP PPLPSYG GR+ H RF S I G +L DVV+TG+NGTI+GQG
Sbjct: 94 DAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDVVVTGNNGTIDGQGAV 153
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-NAFISKI 257
WW K+ QK L TR L++ ++S + ISN+TL +SP W +HP C NV I+ ++ +
Sbjct: 154 WWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTYCSNVLIQWLTILAPV 213
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DS ++ IED ++ GDD IA+KSGWD+YGI +GRP+ +++IR S
Sbjct: 214 DSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCIS 272
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/237 (52%), Positives = 166/237 (70%), Gaps = 9/237 (3%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ-LNVPPGRWLTAPFNLTSHMTLFL 136
++ +FG VGDG TLNT AF+RAV + GGG L+VPPGRWLT FNLTS TLFL
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A IL ++ + WPL+ PLPSYG GRE GPR S IHG+ L DVVITG NGTI+GQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
WW+ +R + LN+TRG L++++ S+++LIS++TL +SPFWT+HP C NV +++ I
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ DS ++ IEDCYI GDD +A+KSGWDQYGI++G+PS NI+I+ +
Sbjct: 269 PLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRV 325
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 135/263 (51%), Positives = 166/263 (63%), Gaps = 8/263 (3%)
Query: 55 GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL 114
GG + P P R A ++ FGG GDG TLNT AF AV +I++ +GG L
Sbjct: 26 GGAGAQETCSGAAPAPPKRGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALL 85
Query: 115 NVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF 174
VPPG WLT PF+LTSHMTLFLA A I A ++ WPL+ PLPSYG GRE G R+ S
Sbjct: 86 YVPPGVWLTGPFSLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISL 145
Query: 175 IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDS 234
IHG L+DV ITG NGTI+GQG WW +++ L TR L+++M SS+ ++SN+ +DS
Sbjct: 146 IHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDS 205
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGW 286
PFW +HP C NV IRN I DS ++ IEDCYIS GDD IAIKSGW
Sbjct: 206 PFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGW 265
Query: 287 DQYGIAYGRPSMNILIRNLVVRS 309
D+YGIAYGRPS +I IR + S
Sbjct: 266 DEYGIAYGRPSSDITIRRITGSS 288
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 135/263 (51%), Positives = 166/263 (63%), Gaps = 8/263 (3%)
Query: 55 GGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL 114
GG + P P R A ++ FGG GDG TLNT AF AV +I++ +GG L
Sbjct: 26 GGAGAQETCSGAAPAPPKRGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALL 85
Query: 115 NVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF 174
VPPG WLT PF+LTSHMTLFLA A I A ++ WPL+ PLPSYG GRE G R+ S
Sbjct: 86 YVPPGVWLTGPFSLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISL 145
Query: 175 IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDS 234
IHG L+DV ITG NGTI+GQG WW +++ L TR L+++M SS+ ++SN+ +DS
Sbjct: 146 IHGNGLQDVFITGENGTIDGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDS 205
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGW 286
PFW +HP C NV IRN I DS ++ IEDCYIS GDD IAIKSGW
Sbjct: 206 PFWNIHPVYCSNVVIRNLTILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGW 265
Query: 287 DQYGIAYGRPSMNILIRNLVVRS 309
D+YGIAYGRPS +I IR + S
Sbjct: 266 DEYGIAYGRPSSDITIRRITGSS 288
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 176/287 (61%), Gaps = 14/287 (4%)
Query: 31 KTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVT 90
+T F +L +A +S + R A V S + R + LTDFGGVGDG T
Sbjct: 15 RTFFAILLVALLSSERVESRKAKVVTTSLEYNAI------NCRAHSAALTDFGGVGDGKT 68
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
NT+AFQ A+ +S+ +GG QL VP G+WLT F+LTSH TL+L DA +LA ++
Sbjct: 69 SNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVLLASQDITE 128
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN 210
WP++ PLPSYG GR+ RF S I G NL DV++TG NGTI+GQG+ WW+++ +K L
Sbjct: 129 WPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKKLKY 188
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DS 262
TR L+++M+S +I ISN+TL +SP W +HP N+ ++ I DS
Sbjct: 189 TRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDS 248
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C ++ IEDCYI GDD +A+KSGWD+YGI +G P+ ++IR L S
Sbjct: 249 CTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCIS 295
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 159/250 (63%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R + LTDFGGVGDG TLNT+AF A+ +S+ GG QL VPPG+WLT FN
Sbjct: 47 PAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFN 106
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL D+ ILA ++E WP P LPSYG GR RF S + G NL DV+ITG
Sbjct: 107 LTSHFTLFLQKDSVILASQDESEWPQFPVLPSYGSGRNASDGRFSSLVFGTNLTDVIITG 166
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+NGTI+GQG WW K+ + + TR +++IM+S I ISN+TL +SP W +HP N+
Sbjct: 167 NNGTIDGQGSYWWDKFHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNI 226
Query: 248 TIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I ++ + + DSC ++ IED YI GDD IAIKSGWD+YGI +G+PS
Sbjct: 227 IINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQ 286
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 287 IIIRRLTCIS 296
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 158/242 (65%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++TDFG VGDG TLNT+AFQ A++ ++ KKGG QL VP GRWLT F+L SH+
Sbjct: 56 RPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHL 115
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA IL + WP++ LPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 116 TLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTI 175
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG WW + LN TR PLV++M+S+ ++ISN+T +SPFW +HP C V ++
Sbjct: 176 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHL 235
Query: 252 ---AFISKIQLF----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
A IS DS ++ IEDCYI GDD + IKSGWD+YGI++ PS NI IRN
Sbjct: 236 TILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 295
Query: 305 LV 306
+
Sbjct: 296 IT 297
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 162/242 (66%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP G+WLT F+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L A IL + + WP++ PLPSYG GRE G R S I+GQNL DVVITG NGTI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R LN TR LV++M S+ ++ISN+T +SPFW +HP C++V ++N
Sbjct: 159 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IEDCYI GDD ++IKSGWD+YGI+Y RPS I I
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 305 LV 306
L
Sbjct: 279 LT 280
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 162/242 (66%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP G+WLT F+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L A IL + + WP++ PLPSYG GRE G R S I+GQNL DVVITG NGTI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R LN TR LV++M S+ ++ISN+T +SPFW +HP C++V ++N
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IEDCYI GDD ++IKSGWD+YGI+Y RPS I I
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 305 LV 306
L
Sbjct: 279 LT 280
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 156/239 (65%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG T NT+AF A+ +S+ GG QL VPPG+WLT FNLTSH TLFL
Sbjct: 52 LTDFGGVGDGKTSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 111
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A IL ++E WP +PPLPSYG GR+ GPRF S I G +L DV+ITG+NGTI+GQG
Sbjct: 112 GAVILGSQDESQWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSY 171
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
WW K+ K L TR +++I++S I ISN+TL +SP W +HP N+ I+ I
Sbjct: 172 WWDKFHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPV 231
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DS ++ IED YI GDD IAIKSGWDQYGI +G+PS I+IR L S
Sbjct: 232 DSPNTDGIDPDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCIS 290
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 178/296 (60%), Gaps = 15/296 (5%)
Query: 24 PAFLSSHKTLFTVLWLAAFASVFIWQ-RNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDF 82
P+ L +T F +L + A +S + + R+ G + + + + R LT+F
Sbjct: 7 PSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALN-----CRKHTAVLTEF 61
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI 142
G VGDG T NT+AF+ A+ ++ GG QL VPPG+WLT FNLTSH TLF+ A I
Sbjct: 62 GAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATI 121
Query: 143 LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK 202
LA ++E +P++ PLPSYG GR+ GP F S I G NL DVVITG+NGTINGQG+ WW K
Sbjct: 122 LASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVK 181
Query: 203 YRQKLLNN-TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQL- 259
YR TR ++I++S ++ ISNIT+ DSP W +HP C NV ++ I + I
Sbjct: 182 YRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSP 241
Query: 260 ------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + +IEDCY+ GDD IA+KSGWDQ+GI G P+ + IR L S
Sbjct: 242 NTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCIS 297
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 178/296 (60%), Gaps = 15/296 (5%)
Query: 24 PAFLSSHKTLFTVLWLAAFASVFIWQ-RNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDF 82
P+ L +T F +L + A +S + + R+ G + + + + R LT+F
Sbjct: 7 PSTLKMIRTSFCILVVLAISSFSMMEARDLASKGKTNIEYMALN-----CRKHTAVLTEF 61
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI 142
G VGDG T NT+AF+ A+ ++ GG QL VPPG+WLT FNLTSH TLF+ A I
Sbjct: 62 GAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATI 121
Query: 143 LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK 202
LA ++E +P++ PLPSYG GR+ GP F S I G NL DVVITG+NGTINGQG+ WW K
Sbjct: 122 LASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVK 181
Query: 203 YRQKLLNN-TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQL- 259
YR TR ++I++S ++ ISNIT+ DSP W +HP C NV ++ I + I
Sbjct: 182 YRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSP 241
Query: 260 ------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC + +IEDCY+ GDD IA+KSGWDQ+GI G P+ + IR L S
Sbjct: 242 NTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCIS 297
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 160/242 (66%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG V DGVTLNT+AF+ A++ +S KGG +L VP GRWLT FNL SH+
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
T+ L DA I+ ++ WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 129 TVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTI 188
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG+ WW + LN TR PL+++M+S ++ISN+T ++PFW +HP C V +++
Sbjct: 189 DGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHL 248
Query: 252 ---AFISKIQLF----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
A IS DS ++ IEDCYI GDD + IKSGWD+YGI++ PS NI IRN
Sbjct: 249 TILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 308
Query: 305 LV 306
+
Sbjct: 309 IT 310
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 159/242 (65%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDG+T NT+AFQ A++ +S KGG QL VP GRWLT F+L SH+
Sbjct: 40 RPHSVSITEFGAVGDGMTRNTKAFQNAIFYLSSFANKGGAQLFVPAGRWLTGSFSLVSHL 99
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
T+ L DA IL + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 100 TVSLDKDAVILGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTI 159
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG+ WW + LN TR PLV+ M+S+ +++SN+T +SPFW +HP C V +++
Sbjct: 160 DGQGEIWWNWFHNHTLNYTRPPLVEFMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHL 219
Query: 252 ---AFISKIQLF----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
A IS DS ++ IEDCYI GDD + IKSGWD+YGI++ PS NI I+N
Sbjct: 220 TILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQN 279
Query: 305 LV 306
+
Sbjct: 280 IT 281
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 157/242 (64%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP ++TDFG VGDG TLNT+AFQ A++ + KKGG QL VP GRWLT F+L SH+
Sbjct: 49 RPHRASVTDFGAVGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHL 108
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA IL + WP++ LPSYG GRE G R S I G NL DV+ITG NGT+
Sbjct: 109 TLSLDKDAVILGSPDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTV 168
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG WW + LN TR PLV++M+S+ ++ISN+T +SPFW +HP C V +++
Sbjct: 169 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHL 228
Query: 252 ---AFISKIQLF----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
A IS DS ++ IEDCY+ GDD I IKSGWD+YGI++ PS NI IRN
Sbjct: 229 TILAPISSPNTDGIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRN 288
Query: 305 LV 306
+
Sbjct: 289 IT 290
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 160/242 (66%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG V DGVTLNT+AF+ A++ +S KGG +L VP GRWLT FNL SH+
Sbjct: 69 RPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAELFVPAGRWLTGSFNLISHL 128
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
T+ L DA I+ ++ WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 129 TVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTI 188
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN- 251
+GQG+ WW + LN TR PL+++M+S ++ISN+T ++PFW +HP C V +++
Sbjct: 189 DGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHL 248
Query: 252 ---AFISKIQLF----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
A IS DS ++ IEDCYI GDD + IKSGWD+YGI++ PS NI IRN
Sbjct: 249 TILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 308
Query: 305 LV 306
+
Sbjct: 309 IT 310
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 164/247 (66%), Gaps = 9/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R + LTDFG GDG T+NT+AF+ A+ +S+ GG +L VPPG+WLT FNLTS
Sbjct: 47 RCRKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTS 106
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H TL++ DA IL ++E +PL+ LPSYG GR+ G R S I G NL DVVITG NG
Sbjct: 107 HFTLYIDKDAVILGAQDESAYPLIEVLPSYGVGRDGGG-RHSSLIFGTNLTDVVITGGNG 165
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
T+NGQG+ WW K+R K N+TR L++IM+S+ + ISN+TL DSP W +HP +NV ++
Sbjct: 166 TLNGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVK 225
Query: 251 N-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ ++ I DSC+ + IEDC+I GDD IA+KSGWDQYG +G P+ ++LI
Sbjct: 226 DLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLI 285
Query: 303 RNLVVRS 309
R L S
Sbjct: 286 RRLTCIS 292
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 156/240 (65%), Gaps = 9/240 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LT+FG VGDG T NT+AF+ A+ ++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 47 LTEFGAVGDGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQK 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A ILA ++E +P++ PLPSYG GR+ GP F S I G NL DVVITG+NGTINGQG+
Sbjct: 107 GATILASQDESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKY 166
Query: 199 WWKKYRQKLLNN-TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SK 256
WW KYR TR ++I++S ++ ISNIT+ DSP W +HP C NV ++ I +
Sbjct: 167 WWVKYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAP 226
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I DSC + +IEDCY+ GDD IA+KSGWDQ+GI G P+ + IR L S
Sbjct: 227 IDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCIS 286
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 165/237 (69%), Gaps = 8/237 (3%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
++ DFGGVGDG T NTEAF+RA+ + G++GG QLNVP GRW+T FNLTS+ TLFL
Sbjct: 1 ISIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFL 60
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A IL ++ K WP++ PLPSYG GRE G R S IHG L +VVITG+NGTI+GQG
Sbjct: 61 EEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQG 120
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR------ 250
+ WW+ + + L +TRG LV++M S DILISN+T R+SPFWT+HP C N+ ++
Sbjct: 121 KMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILA 180
Query: 251 --NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
NA + DS ++ IEDCYI GDD +A+KSGWDQYGI RPS NI+IR +
Sbjct: 181 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRV 237
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 159/241 (65%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDG T+NT AFQ AV+ + KGG QL VP GRWLT F L SH+
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + ILA ++ WPL+ PLPSYG GR+ G R S ++G++L+DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R + LN TRG LV+ + S +I++SNI+L +SP WT+HP C NV IR
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DSC + IEDC I+ G DA+++KSGWD+YGI G PS ++IR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 305 L 305
+
Sbjct: 272 I 272
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 161/242 (66%), Gaps = 9/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP G+WLT F+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L A IL K WP++ PLPSYG GRE G R S I+GQNL DVVITG NGTI
Sbjct: 99 TLWLDKGATILG-STAKNWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 157
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R LN TR LV++M S+ ++ISN+T +SPFW +HP C++V ++N
Sbjct: 158 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 217
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IEDCYI GDD ++IKSGWD+YGI+Y RPS I I
Sbjct: 218 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 277
Query: 305 LV 306
L
Sbjct: 278 LT 279
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 164/247 (66%), Gaps = 9/247 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R + LTDFG GDG T+NT+AF+ A+ +S+ GG +L VPPG+WLT FNLTS
Sbjct: 47 RCRKHSAVLTDFGATGDGKTINTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTS 106
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H TL++ DA IL ++E +PL+ LPSYG GR+ G R S I G NL DVVITG NG
Sbjct: 107 HFTLYIDKDAVILGAQDESAYPLIEVLPSYGVGRDGGG-RHSSLIFGTNLTDVVITGGNG 165
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
T+NGQG+ WW K+R K N+TR L++IM+S+ + ISN+TL DSP W +HP +NV ++
Sbjct: 166 TLNGQGKYWWDKFRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVK 225
Query: 251 N-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ ++ I DSC+ + IEDC+I GDD IA+KSGWDQYG +G P+ ++LI
Sbjct: 226 DLTILAPIDSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLI 285
Query: 303 RNLVVRS 309
R L S
Sbjct: 286 RRLTCIS 292
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 159/241 (65%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDG T+NT AFQ AV+ + KGG QL VP GRWLT F L SH+
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + ILA ++ WPL+ PLPSYG GR+ G R S ++G++++DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R + LN TRG LV+ + S +I++SNI+L +SP WT+HP C NV IR
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DSC + IEDC I+ G DA+++KSGWD+YGI G PS ++IR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 305 L 305
+
Sbjct: 272 I 272
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/246 (47%), Positives = 163/246 (66%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +LT+FGGVGDG T NT+AFQ A+ +S+ GG QL VP G+WLT F+LTSH
Sbjct: 43 CRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSH 102
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L D+ +LA ++ WP++ LPSYG GR+ R+ S I G NL DV++TG NGT
Sbjct: 103 FTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGT 162
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG+ WW+++ +K L TR L++IM+SSDI ISN+TL +SP W +HP N+ ++
Sbjct: 163 IDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQG 222
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ I DSC + IEDCYI GDD +A+KSGWD+YGI++G P+ ++IR
Sbjct: 223 ITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIR 282
Query: 304 NLVVRS 309
L S
Sbjct: 283 RLTCIS 288
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 155/239 (64%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG T NT+AF+ A+ +SKL GG L VPPG+WLT FNLTSH TL++
Sbjct: 58 LTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAALVVPPGKWLTGSFNLTSHFTLYIHK 117
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA +L + E WP +P LPSYG GR+ G R S I G NL DVV+TG NGTI+GQG
Sbjct: 118 DAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSLIFGTNLTDVVVTGANGTIDGQGAY 177
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
WW K+++ L+ TR L++IM+S+ + ISN+T +SP W +HP NV I+ I
Sbjct: 178 WWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVIIQGLTILAPV 237
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC D+ IEDCYI GDD IA+KSGWDQYGI G P+ ++IR + S
Sbjct: 238 DSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCIS 296
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 163/246 (66%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + ++T++GGVGDG TLNT+AFQ AV +S+ +GG QL VP G+WLT FNLTSH
Sbjct: 40 CRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSH 99
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ +P++ LPSYG GR+ G RF S I G NL DV+ITG+NGT
Sbjct: 100 FTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGT 159
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+K+ L TR L+++M+S I ISN+T DSP W +HP N+ ++
Sbjct: 160 IDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKG 219
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ ++ DSC + IEDCYI GDD IA+KSGWD+YGI++G P+ +++IR
Sbjct: 220 VTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIR 279
Query: 304 NLVVRS 309
L S
Sbjct: 280 RLTCIS 285
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 156/239 (65%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFGGVGDG+T NT+AFQ A+ +S+ GG L VPPG+WLT PFNLTSH TLFL
Sbjct: 50 LTDFGGVGDGITSNTKAFQSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHFTLFLDF 109
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A ILA ++E WP +P LPSYG GR+ G RF S I G +L DVVITG+NG I+GQG
Sbjct: 110 GAVILASQDESEWPQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDGQGAY 169
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
WW K+ Q L TR L++IM+S I IS +TL +SP W +HP N+ I+ I
Sbjct: 170 WWNKFHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPV 229
Query: 259 LF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC ++ IEDC I+ GDD IA+KSGWD+YGI +G P+ +++IR + S
Sbjct: 230 DSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVS 288
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 158/246 (64%), Gaps = 8/246 (3%)
Query: 65 ASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
SR + R RP + +T+FG VGDGVT+NT FQ A++ + KGG QL VP GRWLT
Sbjct: 25 CSRYVGRTRPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTG 84
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
FNLTSH+TLFL DA I+ + WP++ PLPSYG G + G R S I+G N+ DVV
Sbjct: 85 SFNLTSHLTLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVV 144
Query: 185 ITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
ITG+NG I+GQG WW +R LN +R LV+ S +I+ISN+T +SP W +HP C
Sbjct: 145 ITGNNGVIDGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYC 204
Query: 245 KNVTIRN--------AFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
NVT+ N A +S + DSC ++ IED ISV DAI++KSGWD YGI +GRP
Sbjct: 205 SNVTVNNITIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRP 264
Query: 297 SMNILI 302
+ +I I
Sbjct: 265 TSDIHI 270
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 159/242 (65%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG +GDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT FNL SH+
Sbjct: 23 RPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFNLISHL 82
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + +WP++ PLPSYG GRE G R S I G NL DV+ITG NG+I
Sbjct: 83 TLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLIFGLNLTDVIITGANGSI 142
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R LN TR LV++M+S++++ISN+T ++SPFW +HP C V +++
Sbjct: 143 DGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I CY+ GDD I IKSGWD+YGI++ +PS NI I +
Sbjct: 203 TILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISD 262
Query: 305 LV 306
+
Sbjct: 263 IT 264
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 173/285 (60%), Gaps = 14/285 (4%)
Query: 33 LFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLN 92
L L LA S +R A + SF + R + +LTDFGGVGDG T N
Sbjct: 32 LVCALLLATLVSSEATERKAKIVDTSFEYNAL------NCRAHSASLTDFGGVGDGNTSN 85
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWP 152
T+AFQ A+ +S+ KGG QL VP G+WLT F++TSH TL+L DA +LA ++ WP
Sbjct: 86 TKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLNKDAVLLASQDMNEWP 145
Query: 153 LMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTR 212
++ PLPSYG GR+ R+ SFI G NL DV++TG NGTI+GQG WW+++ K LN TR
Sbjct: 146 VIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFYNKRLNYTR 205
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKIQL-------FDSCE 264
L+++M+S I ISN+T +SP W +HP N+ I+ I+ + DSC
Sbjct: 206 PYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGINPDSCT 265
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ IEDCYI GDD +A+KSGWD++GI +G P+ ++IR L S
Sbjct: 266 NTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCIS 310
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 166/281 (59%), Gaps = 15/281 (5%)
Query: 33 LFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLN 92
+FTVL L + R V G + P R + LTDFGGVGDG T N
Sbjct: 16 IFTVLLLGLQGVRVVECR--VANGLDCFEY-----PAISCRKHSAVLTDFGGVGDGKTSN 68
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWP 152
T+AFQ A+ +S GG L VPPG+WLT FNLTSH TLFL +A IL ++E WP
Sbjct: 69 TKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWP 128
Query: 153 LMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTR 212
+P LPSYG GR+ RF S I G NL DVVITG+NGTI+GQG WW K+ + L TR
Sbjct: 129 TLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFHKGELKLTR 188
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCE 264
+++IM+S I ISN+TL DSP W +HP ++ I+ I + DSC
Sbjct: 189 PYMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGINPDSCS 248
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ IEDCYI GDD +AIKSGWD+ GI +G PS +I+IR L
Sbjct: 249 NTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRL 289
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 161/249 (64%), Gaps = 10/249 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ KGG QL VP GRWLT FNLT
Sbjct: 28 PGSRPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLT 87
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL ++A I+ ++ WP++ PLPSYG G + GPR S I+G NL DVVITG+N
Sbjct: 88 SHLTLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNN 147
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW LN++R +V+ + S +++ISN+T +SP W++HP C NV +
Sbjct: 148 GVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKV 207
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
N I K L DSC ++ IED ISVG DAI++KSGWD YGI++GRP+ +I
Sbjct: 208 HNVTI-KTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDI 266
Query: 301 LIRNLVVRS 309
I + +++
Sbjct: 267 HISRVDLQA 275
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 161/249 (64%), Gaps = 10/249 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ KGG QL VP GRWLT FNLT
Sbjct: 28 PGSRPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLT 87
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL ++A I+ ++ WP++ PLPSYG G + GPR S I+G NL DVVITG+N
Sbjct: 88 SHLTLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNN 147
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW LN++R +V+ + S +++ISN+T +SP W++HP C NV +
Sbjct: 148 GVIDGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKV 207
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
N I K L DSC ++ IED ISVG DAI++KSGWD YGI++GRP+ +I
Sbjct: 208 HNVTI-KTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDI 266
Query: 301 LIRNLVVRS 309
I + +++
Sbjct: 267 HISRVDLQA 275
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 169/285 (59%), Gaps = 15/285 (5%)
Query: 33 LFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLN 92
++TVL L + R V G + P R + LTDFGGVGDG T N
Sbjct: 16 IYTVLLLGLQGVRVVECR--VANGLDCFEY-----PAISCRKHSAVLTDFGGVGDGKTSN 68
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWP 152
T+AFQ A+ +S GG L VPPG+WLT FNLTSH TLFL +A IL ++E WP
Sbjct: 69 TKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWP 128
Query: 153 LMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTR 212
+P LPSYG GR+ RF S I G NL DV+ITG+NGTI+GQG WW K+ + L TR
Sbjct: 129 TLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTR 188
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCE 264
+++IM+S I ISN+TL +SP W +HP ++ I+ I + DSC
Sbjct: 189 PYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTDGIDPDSCS 248
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
++ IEDCYI GDD +AIKSGWD+YGI +G PS +I+IR L S
Sbjct: 249 NIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVS 293
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+T+FG GDG TLNT+AF+ AV +S+L GG QL VPPGRWLT F+L SH TL+L
Sbjct: 13 ITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSFSLISHFTLYLHQ 72
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A +LA ++EK +P++ PLPSYG GR+ RF S I G NL DVVITG NGTI+GQG++
Sbjct: 73 GAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVITGANGTIDGQGES 132
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
WWKKY+ L TR ++++M+S+ + ISN+TL +SP W +HP C++V IR I
Sbjct: 133 WWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVIIRGLTILAPT 192
Query: 259 LF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DSC ++ IE YI GDD IAIKSGWD+YGI + P+ +++IR+L S
Sbjct: 193 HSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCIS 251
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/251 (47%), Positives = 163/251 (64%), Gaps = 18/251 (7%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +LTDFGGVGDG NT+AFQ A+ +S+ +GG QL VP G+WLT F+LTSH
Sbjct: 50 CRAHSASLTDFGGVGDGKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSH 109
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++ WP++ PLPSYG GR+ RF S I G NL DV++TG NGT
Sbjct: 110 FTLYLDKDAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGT 169
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG+ WW+++ +K L TR L+++M+S +I ISN+TL +SP W +HP N+ ++
Sbjct: 170 IDGQGEFWWQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQG 229
Query: 252 AFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
I +F DSC ++ IEDCYI GDD +A+KSGWD+YGI +G P+
Sbjct: 230 -----ITIFAPVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTK 284
Query: 299 NILIRNLVVRS 309
++IR L S
Sbjct: 285 QLMIRRLTCIS 295
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 161/248 (64%), Gaps = 9/248 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTAPFNLT 129
+ R +++DFG VGDG TLNT+AF A+ I G L VP G +LT FNLT
Sbjct: 39 KHRNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLT 98
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SHMTL+LAD A I A+++ + WPL PLPSYG GREH G R+ SFIHG L DVVITG N
Sbjct: 99 SHMTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRN 158
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG+ WW +R L TR L++ S++IL+S++ L++SPFWTLHP C NV +
Sbjct: 159 GTIDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVV 218
Query: 250 RNAFI-SKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
+ I + + DS ++ IED YIS GDD +A+KSGWD+YGIAY RPS +I
Sbjct: 219 HHVTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDIT 278
Query: 302 IRNLVVRS 309
IR + S
Sbjct: 279 IRRITGSS 286
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 167/249 (67%), Gaps = 12/249 (4%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
RLR ++ DFGGVGDG TLNT+AF+ AVY I L ++GG L +PPG +LT FNLTS
Sbjct: 2 RLRNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLTS 61
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A ++ WPL+ PLPSYG GRE G R+ SFIHG L+DV+ITG NG
Sbjct: 62 HMTLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGENG 121
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW +RQ+ L TR LV+ + S I+ISN+ R+SPFW +HP +NV IR
Sbjct: 122 TIDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIR 181
Query: 251 NAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
+++ + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS +I
Sbjct: 182 --YVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDI 239
Query: 301 LIRNLVVRS 309
IR + S
Sbjct: 240 TIRRITGSS 248
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 162/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +LTDFGGVGDG T NT+AF+ A+ +S+ GG QL VP G+WLT F+LTSH
Sbjct: 38 CRAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSH 97
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++ + WP+M PLPSYG GR+ R+ S I G NL DV+ITG+NGT
Sbjct: 98 FTLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGT 157
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+ + + L TR L++IM+S I ISN+TL +SP W +HP +++ ++
Sbjct: 158 IDGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQG 217
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ I DSC + IEDCYI GDD +A+KSGWD+YGIA+G P+ ++IR
Sbjct: 218 ITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIR 277
Query: 304 NLVVRS 309
L S
Sbjct: 278 RLTCIS 283
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 158/242 (65%), Gaps = 8/242 (3%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +T+FG VGDGVTLNT +FQ AV+ + KGG QL +P GRWLT FNLTSH+TLF
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A I+ ++ WP++ PLPSYG G + G R S I+GQNL DVVITG+NGTI+GQ
Sbjct: 100 LESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQ 159
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G WW +R LN +R LV+ + S I+ISNIT +SP W++HP C NV + + I
Sbjct: 160 GSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQ 219
Query: 256 KIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ DSC +M IED ISV DAI++KSGWD+ GIA+GRP+ +I I L +
Sbjct: 220 TSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDL 279
Query: 308 RS 309
+S
Sbjct: 280 QS 281
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/242 (49%), Positives = 160/242 (66%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDGVTLNT+AFQ A++ + KGG +L VP G+WLT F+L SH+
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L A IL + + WP++ PLPSYG GRE G R S I+GQNL DVVITG NGTI
Sbjct: 99 TLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW +R LN TR LV++M S+ ++ISN+T +SPFW +HP C++V ++N
Sbjct: 159 DGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IEDCYI DD ++IK+GWD+YGI+Y RPS I I
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINR 278
Query: 305 LV 306
L
Sbjct: 279 LT 280
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 158/242 (65%), Gaps = 8/242 (3%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +T+FG VGDGVTLNT +FQ AV+ + KGG QL +P GRWLT FNLTSH+TLF
Sbjct: 40 SVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLF 99
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A I+ ++ WP++ PLPSYG G + G R S I+GQNL DVVITG+NGTI+GQ
Sbjct: 100 LESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDGQ 159
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G WW +R LN +R LV+ + S I+ISNIT +SP W++HP C NV + + I
Sbjct: 160 GSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQ 219
Query: 256 KIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ DSC +M IED ISV DAI++KSGWD+ GIA+GRP+ +I I L +
Sbjct: 220 TSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDL 279
Query: 308 RS 309
+S
Sbjct: 280 QS 281
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 171/287 (59%), Gaps = 14/287 (4%)
Query: 31 KTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVT 90
+ + VL + +S R G SF + R + +LTDFGGVGDG T
Sbjct: 15 RLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAI------NCRTHSASLTDFGGVGDGKT 68
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
NT+AFQ A+ +S+ KGG QL VP G+WLT F+L SH TL+L DA +LA ++
Sbjct: 69 SNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVLLASQDISE 128
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN 210
WP + PLPSYG GR+ R+ S I G NL DV++TG NGTI+GQG WW+K+ +K L
Sbjct: 129 WPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKKLKY 188
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKIQL-------FDS 262
TR L+++M+S I ISN+TL +SP W LHP N+ I+ I+ + DS
Sbjct: 189 TRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGINPDS 248
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C + IEDCYI GDD +A+KSGWD+YGI +G P+ ++IR L S
Sbjct: 249 CTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCIS 295
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 161/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + ++T++GGVGDG TLNT+AFQ AV +S+ GG QL VP G+WLT FNLTSH
Sbjct: 40 CRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSH 99
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ +P++ LPSYG GR+ G RF S G NL DV+ITG+NGT
Sbjct: 100 FTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGT 159
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+K+ L TR L+++M+S I ISN+T DSP W +HP N+ ++
Sbjct: 160 IDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKG 219
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ ++ DSC + IEDCYI GDD IA+KSGWD+YGI++G P+ +++IR
Sbjct: 220 VTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIR 279
Query: 304 NLVVRS 309
L S
Sbjct: 280 RLTCIS 285
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 157/251 (62%), Gaps = 18/251 (7%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L +FG VGDGVT NT+AF+ AV +S+ GG L VP GRWLT FNLTSH
Sbjct: 62 CRAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTGNFNLTSH 121
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA ILA + E + ++ PLPSYG GR+ G RF S + G NL DVVITG NGT
Sbjct: 122 FTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGT 181
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG+ WW K+++ L TR L++IM S I ISN+T +SP W +HP V RN
Sbjct: 182 IDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHP-----VYSRN 236
Query: 252 AFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
FI + + DSC + IEDCYI GDD IA+KSGWDQYGIAYG P+
Sbjct: 237 IFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTK 296
Query: 299 NILIRNLVVRS 309
+LIR L S
Sbjct: 297 QLLIRRLTCIS 307
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 37 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 96
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ +W ++ PLPSYG G E G R+ S I+G L+DVVITG NGTI
Sbjct: 97 TLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDNGTI 156
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQG WW + LN +R LV+ + S+++++SN+T ++P + +HP C NV ++N
Sbjct: 157 NGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNI 216
Query: 253 FISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ + DS + IEDC I++G DAIA+KSGWD+YGIAYGRP+ N+ IR
Sbjct: 217 SVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRR 276
Query: 305 LVVRS 309
+ ++S
Sbjct: 277 VNLQS 281
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 94
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ +W ++ PLPSYG G E G R+ S I+G L+DVVITG NGTI
Sbjct: 95 TLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGGRYRSLINGYMLRDVVITGDNGTI 154
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NGQG WW + LN +R LV+ + S+++++SN+T ++P + +HP C NV ++N
Sbjct: 155 NGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNI 214
Query: 253 FISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ + DS + IEDC I++G DAIA+KSGWD+YGIAYGRP+ N+ IR
Sbjct: 215 SVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRR 274
Query: 305 LVVRS 309
+ ++S
Sbjct: 275 VNLQS 279
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 153/224 (68%), Gaps = 9/224 (4%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LT+FGG+GDG T NT+AF+ A+ + + GG +L VPPG+WLT FNLTSH TL++
Sbjct: 51 LTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSHFTLYIHK 110
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA IL + E +P +PPLPSYG GR+ G RF S I G NL DVVI G NGTINGQG+
Sbjct: 111 DAVILGSQEESDYPHIPPLPSYGKGRDGGG-RFSSLIFGTNLTDVVIIGGNGTINGQGRV 169
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKI 257
WW K++QK L +TR L++IM+S + ISN+TL DSP W +HP C +V I+ ++ +
Sbjct: 170 WWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPV 229
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
+ DSC ++ IEDCYI GDD IA+KSGWDQYGI YG
Sbjct: 230 DVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 155/236 (65%), Gaps = 9/236 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG GDG T+NT+AF+ A+ +S++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 303 LTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHK 362
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA IL ++E +PL+ LPSYG GR+ G R S I G NL DVVITG NGTI+GQGQ
Sbjct: 363 DAVILGAQDEAAYPLIEILPSYGAGRDGGG-RHASLIFGTNLTDVVITGGNGTIHGQGQY 421
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-NAFISKI 257
WW K+R L +TR L++IM+S + ISN+ L DSP W +HP NV I+ I+ +
Sbjct: 422 WWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPV 481
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
DS ++++IEDC+I GDD IA+KSGWDQYGI G+ + ++ N+
Sbjct: 482 GSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGRIYMVAENVT 537
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 158/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R ++ DFGGVGDG T NT AF+ AV +S+ +GGG L VP G+WLT PFN
Sbjct: 72 PACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFN 131
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TL+L DA IL ++ WP++ PLPSYG GR+ G RF S I G NL DVVITG
Sbjct: 132 LTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITG 191
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ + L TRG L+++M S I ISN+TL +SP W +HP N+
Sbjct: 192 SNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNI 251
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGI+YG PS +
Sbjct: 252 VVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQH 311
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 312 IVIRRLTCVS 321
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 155/250 (62%), Gaps = 18/250 (7%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R + +L +FG VGDGVT NT AF+ AV +S+ GG L VP GRWLT FNLTSH
Sbjct: 63 RAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGSFNLTSHF 122
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL DA ILA + E + ++ PLPSYG GR+ G RF S + G NL DVVITG NGTI
Sbjct: 123 TLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGTI 182
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG+ WW K+++ L TR L++IM S I ISN+T +SP W +HP V RN
Sbjct: 183 DGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHP-----VYSRNI 237
Query: 253 FISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
FI + + DSC + IEDCYI GDD IA+KSGWDQYGI YG P+
Sbjct: 238 FIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQ 297
Query: 300 ILIRNLVVRS 309
+LIR L S
Sbjct: 298 LLIRRLTCIS 307
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 174/286 (60%), Gaps = 19/286 (6%)
Query: 37 LWLAAFASVFIW-----QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTL 91
++LA F ++ R A + SF+ G+ R + +LTDFGGVGDG T
Sbjct: 16 IFLAIFVVTLVYPERVESRKAKIVTTSFVYNGI------NCRAHSASLTDFGGVGDGNTS 69
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
NT+AFQ A+ +S+ G +GG QL VP G+WLT F+LTSH TL+L DA +LA ++ W
Sbjct: 70 NTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEW 129
Query: 152 PLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT 211
P++ PLPSYG GR+ RF S I G NL DV++TG NGTI+GQG WW+++ +K L T
Sbjct: 130 PVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYT 189
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN----VTIRNAFISKIQLF----DSC 263
R L+++M+S I ISN+TL +SP W +HP N A IS DSC
Sbjct: 190 RPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSC 249
Query: 264 EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ IEDCYI GDD +A+KSGWD+YGI +G P+ ++IR L S
Sbjct: 250 TNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCIS 295
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
R +P R ++ DFGGVGDGVT NTE F+RA+ + G GG QLNVP GRW+T F
Sbjct: 68 REVPP-RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTS+ TLFL + A IL ++ + WP++ PLPSYG GRE G R S IHG L +VVIT
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG+ WW+ + + L +TRG L++I S +ILISN+T +SPFWT+HP C N
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 247 VTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I++ I + DS ++ IEDCYI GDD +A+KSGWDQYGIA RPS
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 299 NILIRNL 305
NI++R L
Sbjct: 307 NIIVRRL 313
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 174/286 (60%), Gaps = 19/286 (6%)
Query: 37 LWLAAFASVFIW-----QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTL 91
++LA F ++ R A + SF+ G+ R + +LTDFGGVGDG T
Sbjct: 16 IFLAIFVVTLVYPERVESRKAKIVTTSFVYNGI------NCRAHSASLTDFGGVGDGNTS 69
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
NT+AFQ A+ +S+ G +GG QL VP G+WLT F+LTSH TL+L DA +LA ++ W
Sbjct: 70 NTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQDITEW 129
Query: 152 PLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT 211
P++ PLPSYG GR+ RF S I G NL DV++TG NGTI+GQG WW+++ +K L T
Sbjct: 130 PVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKELKYT 189
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN----VTIRNAFISKIQLF----DSC 263
R L+++M+S I ISN+TL +SP W +HP N A IS DSC
Sbjct: 190 RPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSC 249
Query: 264 EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ IEDCYI GDD +A+KSGWD+YGI +G P+ ++IR L S
Sbjct: 250 TNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCIS 295
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/246 (47%), Positives = 161/246 (65%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L DFGGVGDG T NT+AFQ A+ +S+ KGG QL VP G+WLT F+L SH
Sbjct: 50 CRAHSASLIDFGGVGDGNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISH 109
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++ + WP++ PLPSYG GR+ R+ S I G NL DV++TG NGT
Sbjct: 110 FTLYLNKDAFLLASQDIREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGT 169
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+K+++K L TR L+++M+S I ISN+TL +SP W +HP N+ I+
Sbjct: 170 IDGQGAFWWQKFQKKKLKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKG 229
Query: 252 -AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I+ + DSC + IEDCYI GDD +A+KSGWD+YGI +G P+ ++IR
Sbjct: 230 LTIIAPVPSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIR 289
Query: 304 NLVVRS 309
L S
Sbjct: 290 RLTCIS 295
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 161/248 (64%), Gaps = 8/248 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
PR RP + +++FG VGDGVT+NT FQ A++ + KGG QL VP GRWLT FNLT
Sbjct: 3 PRPRPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLT 62
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+T+FL DA I+ + WP++ PLPSYG G + G R S I+G N+ DVVITG+N
Sbjct: 63 SHLTIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNN 122
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN--- 246
G I+GQG WW +R LN +R LV+ + S DI+ISN+TL +SP W +HP C N
Sbjct: 123 GIIDGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMV 182
Query: 247 --VTIRNAFISKIQ---LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
VTIR + + + + DSC +M IED ISV DAI++KSGWD YGI GRP+ +I
Sbjct: 183 HDVTIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIH 242
Query: 302 IRNLVVRS 309
I + +++
Sbjct: 243 ISRVDLQA 250
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 158/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R ++ DFGGVGDG T NT AF+ AV +S+ +GGG L VP G+WLT PFN
Sbjct: 5 PACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFN 64
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TL+L DA IL ++ WP++ PLPSYG GR+ G RF S I G NL DVVITG
Sbjct: 65 LTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITG 124
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ + L TRG L+++M S I ISN+TL +SP W +HP N+
Sbjct: 125 SNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNI 184
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGI+YG PS +
Sbjct: 185 VVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQH 244
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 245 IVIRRLTCVS 254
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/237 (48%), Positives = 159/237 (67%), Gaps = 1/237 (0%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R + ++TDFGGVGDG+T NT+AFQ A+ +S+ GG QL VP G+WLT F+LTSH
Sbjct: 50 RAHSASITDFGGVGDGITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHF 109
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL DA +L ++ K WPL+ PLPSYG GR+ R+ S I G NL D+++TG+NGTI
Sbjct: 110 TLFLHKDAVLLGSQDLKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTI 169
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW+++++ L TR L++IM+S +I ISN+TL +SP W +HP N+ I+
Sbjct: 170 DGQGAFWWQQFKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGI 229
Query: 253 FISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I + D + DCYI GDD +A+KSGWD+YGIA+G P+ ++IR L S
Sbjct: 230 TIIA-PVTSPNTDGINPDCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCIS 285
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 158/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R ++ DFGGVGDG T NT AF+ AV +S+ +GGG L VP G+WLT PFN
Sbjct: 52 PACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFN 111
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TL+L DA IL ++ WP++ PLPSYG GR+ G RF S I G NL DVVITG
Sbjct: 112 LTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITG 171
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ + L TRG L+++M S I ISN+TL +SP W +HP N+
Sbjct: 172 SNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNI 231
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGI+YG PS +
Sbjct: 232 VVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQH 291
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 292 IVIRRLTCVS 301
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/244 (47%), Positives = 158/244 (64%), Gaps = 8/244 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ + KGG QL VP GRWLT FNLT
Sbjct: 27 PGSRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLT 86
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+T++L A I+ ++ WP++ PLPSYG G + GPR S I+G NL DVVITG+N
Sbjct: 87 SHLTIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNN 146
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW+ LN++R L++ ++S DI+ISN+T +SP W++HP C NV +
Sbjct: 147 GVIDGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKV 206
Query: 250 RNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N I + DSC ++ IED ISV +AI++KSGWD+YGI++GRP+ +I
Sbjct: 207 HNVTIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIH 266
Query: 302 IRNL 305
I +
Sbjct: 267 ISRV 270
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
R +P R ++ DFGGVGDGVT NTE F+RA+ + G GG QLNVP GRW+T F
Sbjct: 68 REVPP-RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTS+ TLFL + A IL ++ + WP++ PLPSYG GRE G R S IHG L +VVIT
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG+ WW+ + + L +TRG L++I S +ILISN+T +SPFWT+HP C N
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 247 VTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I++ I + DS ++ IEDCYI GDD +A+KSGWDQYGIA RPS
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 299 NILIRNL 305
NI++R L
Sbjct: 307 NIIVRRL 313
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 154/250 (61%), Gaps = 8/250 (3%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R + LTDFG VGDG TLNT+AF A+ +S+ GG QL VPPG+WLT FN
Sbjct: 46 PAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFN 105
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLFL DA IL ++E WP + LPSYG GR+ RF S I G NL DV+ITG
Sbjct: 106 LTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITG 165
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ +K L TR +++IM+S I ISN+TL +SP W +HP N+
Sbjct: 166 DNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNI 225
Query: 248 TIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I I + DSC ++ IED +I GDD IAIKSGWD+YGI G PS
Sbjct: 226 IINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQ 285
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 286 IIIRRLTCIS 295
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 158/250 (63%), Gaps = 10/250 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG--QLNVPPGRWLTAPFN 127
P R ++ DFGGVGDG T NT AF+ AV +S+ +GGG L VP G+WLT PFN
Sbjct: 45 PACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTGPFN 104
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TL+L DA IL ++ WP++ PLPSYG GR+ G RF S I G NL DVVITG
Sbjct: 105 LTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVVITG 164
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG WW K+ + L TRG L+++M S I ISN+TL +SP W +HP N+
Sbjct: 165 SNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNI 224
Query: 248 TIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
++ I DSC + IEDCYI GDD +AIKSGWD+YGI+YG PS +
Sbjct: 225 VVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQH 284
Query: 300 ILIRNLVVRS 309
I+IR L S
Sbjct: 285 IVIRRLTCVS 294
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 166/241 (68%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R A ++ +FGGVGDG T NTE F++A+ + + G+ GG QLNVP GRW+T FNLTS+
Sbjct: 31 RKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNF 90
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A IL ++ K WP++ PLPSYG GRE G R S +HG L +VVITG+NGTI
Sbjct: 91 TLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTI 150
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG+ WW+ + + L +TRG LV++M S++ILI+N+T ++PFWT+HP C NV +++
Sbjct: 151 DGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDM 210
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ IEDCYI GDD +A+KSGWDQYGI RPS NI++R
Sbjct: 211 TILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRR 270
Query: 305 L 305
+
Sbjct: 271 V 271
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 165/247 (66%), Gaps = 9/247 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
R +P R ++ DFGGVGDGVT NTE F+RA+ + G GG QLNVP GRW+T F
Sbjct: 57 REVPP-RKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 115
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTS+ TLFL + A IL ++ + WP++ PLPSYG GRE G R S IHG L +VVIT
Sbjct: 116 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 175
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG+ WW+ + + L +TRG L++I S +ILISN+T +SPFWT+HP C N
Sbjct: 176 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 235
Query: 247 VTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I++ I + DS ++ IEDCYI GDD +A+KSGWDQYGIA RPS
Sbjct: 236 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 295
Query: 299 NILIRNL 305
NI++R L
Sbjct: 296 NIIVRRL 302
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 165/249 (66%), Gaps = 12/249 (4%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R R ++ DFGGVGDG T+NT+AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 36 RYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLTS 95
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A ++ WPL+ PLPSYG GRE G R+ SFIHG L DVVITG NG
Sbjct: 96 HMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENG 155
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WW +RQ+ L TR LV+ + S I+ISN+ ++SPFW +HP C NV IR
Sbjct: 156 TIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIR 215
Query: 251 NAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
F++ + DS ++ IED YIS GDD +A+KSGWD+YGIAYGRPS +I
Sbjct: 216 --FVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHI 273
Query: 301 LIRNLVVRS 309
IR + S
Sbjct: 274 TIRRITGSS 282
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 155/242 (64%), Gaps = 8/242 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGV LNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 99 TLSLDKDAVIIGSPDSSNWPVIDPLPSYGRGRELPGERHQSLIFGYNLTDVIITGANGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S++++ISN+T ++SPFW +HP C V + +
Sbjct: 159 DGQGAVWWDWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHL 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I+ CY+ GDD I IKSGWD+YGI++ PS NI I N
Sbjct: 219 TILAPLDSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITN 278
Query: 305 LV 306
+
Sbjct: 279 IT 280
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 153/235 (65%), Gaps = 18/235 (7%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L DFGGVGDG TLNT+AFQ AV +SK G +GG QL VP G+WLT F+LTSH
Sbjct: 44 CRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSH 103
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA +LA ++ WP++ PLPSYG GR+ R+ S I G NL DV+ITG NGT
Sbjct: 104 FTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGT 163
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG WW+++ L TR L+++M+S+DI ISN+TL +SP W +HP V RN
Sbjct: 164 IDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHP-----VYSRN 218
Query: 252 AFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
I I + DSC + IEDCYI GDD +A+KSGWD+YGIAY
Sbjct: 219 ILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY 273
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 159/245 (64%), Gaps = 10/245 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ + KGG QL VP GRWLT FNLT
Sbjct: 37 PGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLT 96
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TL+L + A I+ ++ W ++ PLPSYG G + GPR S I G NL DVVITG+N
Sbjct: 97 SHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNN 156
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW+ R LN++R L++ ++S DI+ISN+T +SP W++HP C NV +
Sbjct: 157 GVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKV 216
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
N I K L DSC ++ IED ISV +AI++KSGWD+YGI++GRP+ +I
Sbjct: 217 HNVTI-KTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDI 275
Query: 301 LIRNL 305
I +
Sbjct: 276 RISRV 280
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 165/246 (67%), Gaps = 10/246 (4%)
Query: 70 PRL--RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
PRL RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT FN
Sbjct: 155 PRLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFN 214
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH+TLFL A I+ ++ +W ++ PLPSYG G E G R+ S I+G L DVV+TG
Sbjct: 215 LTSHLTLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTG 274
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+NGTI+G G WW Y LN++R LV+I+ S +++SN+T ++P +++HP C +V
Sbjct: 275 NNGTIDGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHV 334
Query: 248 TIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I+N IS + DS +++ IEDC +++G DAI++KSGWD+YGIAYGRP+ N
Sbjct: 335 HIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTEN 394
Query: 300 ILIRNL 305
+ IR +
Sbjct: 395 VHIRRV 400
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 164/246 (66%), Gaps = 10/246 (4%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P P + ++TDFGGVGDG T NTEAF+RAV + +GG QLNVP G WL+ FN
Sbjct: 65 PFPNRK--VMSITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFN 122
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTS+ TLFL A IL ++ WP++ PLPSYG GRE G R S IHG NL +VVITG
Sbjct: 123 LTSNFTLFLQRGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITG 182
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
NGTI+GQG+ WW+ + + L +TRG L+++ +ILISN+TL +SPFWT+HP C NV
Sbjct: 183 ENGTIDGQGKMWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNV 242
Query: 248 TIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
IRN ++ I DS ++ IEDCYI GDD IA+KSGWDQYG+A RPS N
Sbjct: 243 VIRNMTILAPINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSN 302
Query: 300 ILIRNL 305
I+IR +
Sbjct: 303 IVIRRI 308
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG T NT AF+ A++ + KGG QL VPPGRWLT FNLTSH+
Sbjct: 58 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 117
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ +W ++ PLPSYG G E G R+ S I+G NL DVVITG+NGTI
Sbjct: 118 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 177
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW+ + LN +R +V+ + S+DI+ISN+T +SP W +HP C NV ++N
Sbjct: 178 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 237
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ + DS E + IED IS+G DAI +KSGWD+YGIAYG+P+ N+ IR
Sbjct: 238 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 297
Query: 305 LVVRS 309
+ ++S
Sbjct: 298 VWLQS 302
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/245 (51%), Positives = 167/245 (68%), Gaps = 9/245 (3%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+PR R ++ DFGGVGDG T NTE F++AV + + +KGG QL VP GRWLT FNL
Sbjct: 71 LPR-REVVRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNL 129
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
TS+ TLFL + A IL ++ K WP++ PLPSYG GRE G R S IHG L +V+ITG+
Sbjct: 130 TSNFTLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGN 189
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
NG+I+GQG+ WW+ + + L +TRG LV++M S +ILISN+T R+SPFWT+HP C NV
Sbjct: 190 NGSIDGQGKMWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVV 249
Query: 249 IR--------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
++ NA + DS ++ IEDCYI GDD +A+KSGWDQYGI RPS +I
Sbjct: 250 VKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHI 309
Query: 301 LIRNL 305
++R +
Sbjct: 310 IVRRV 314
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 158/242 (65%), Gaps = 10/242 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ + KGG QL VP GRWLT FNLT
Sbjct: 37 PGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLT 96
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TL+L + A I+ ++ W ++ PLPSYG G + GPR S I G NL DVVITG+N
Sbjct: 97 SHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNN 156
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW+ R LN++R L++ ++S DI+ISN+T +SP W++HP C NV +
Sbjct: 157 GVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKV 216
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
N I K L DSC ++ IED ISV +AI++KSGWD+YGI++GRP+ +I
Sbjct: 217 HNVTI-KTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDI 275
Query: 301 LI 302
I
Sbjct: 276 RI 277
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 157/241 (65%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + +WP++ PLPSYG GR+ G R S I G NL DV+ITG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S++++ISN+T ++SPFW +HP C V +R+
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I CY+ G D I IKSGWD+YGI++ +PS NI I +
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 305 L 305
+
Sbjct: 279 I 279
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 166/247 (67%), Gaps = 13/247 (5%)
Query: 72 LRPAA-----FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
RP A ++TDFGGVGDG T NTEAF++A+ + + G KGG +L VP G W+T F
Sbjct: 60 FRPDATAGVVMSITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSF 119
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTS+ TLFL A ILA ++ WP++ PLPSYG GRE G R S IHG L +VVIT
Sbjct: 120 NLTSNFTLFLQRGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVIT 179
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG+ WW+ + + LN+TRG LV+++ S +ILISN+T ++SPFWT+HP C N
Sbjct: 180 GENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSN 239
Query: 247 VTIR--------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I+ NA + DS ++ IEDCYI GDD +A+KSGWDQYGI RPS
Sbjct: 240 VVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSS 299
Query: 299 NILIRNL 305
NI+IR +
Sbjct: 300 NIVIRRV 306
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 162/245 (66%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG T NT AF+ A++ + KGG QL VPPGRWLT FNLTSH+
Sbjct: 123 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 182
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A IL ++ +W ++ PLPSYG G E G R+ S I+G NL DVVITG+NGTI
Sbjct: 183 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 242
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW+ + LN +R +V+ + S+DI+ISN+T +SP W +HP C NV ++N
Sbjct: 243 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 302
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ + DS E + IED IS+G DAI +KSGWD+YGIAYG+P+ N+ IR
Sbjct: 303 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 362
Query: 305 LVVRS 309
+ ++S
Sbjct: 363 VWLQS 367
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 165/256 (64%), Gaps = 18/256 (7%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P + RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG WLT F
Sbjct: 30 NPSLKPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSF 89
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTSH+TLFL A I+ ++ W ++ PLPSYG G E G R+ S I+G L+DVVIT
Sbjct: 90 NLTSHLTLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVIT 149
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G+NGTI+G G WW+ + LN +R LV+++ S+D+++SN+T ++P + +HP C+N
Sbjct: 150 GNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRN 209
Query: 247 VTIRNAFISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
V I N I +F DS + + IEDC I+ G DAIA+KSGWD+YGIAY
Sbjct: 210 VHIHN-----ISIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAY 264
Query: 294 GRPSMNILIRNLVVRS 309
GRP+ N+ IR + +++
Sbjct: 265 GRPTENVHIRRVHLQA 280
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 157/241 (65%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + +WP++ PLPSYG GR+ G R S I G NL DV+ITG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S++++ISN+T ++SPFW +HP C V +R+
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I CY+ G D I IKSGWD+YGI++ +PS NI I +
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 305 L 305
+
Sbjct: 279 I 279
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/268 (47%), Positives = 157/268 (58%), Gaps = 34/268 (12%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R A ++ FGGVGDG LNT AF RAV I + +GG L VP G WLT PFNLTSHM
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 133 TLFLADDAEILAIE--------------------------NEKYWPLMPPLPSYGYGREH 166
TLFLA A I A + + WPL+ PLPSYG GRE
Sbjct: 104 TLFLARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGREL 163
Query: 167 HGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILI 226
G R+ S IHG L+DV ITG NGTI+GQG WW +R++ L TR L++++ S+D++I
Sbjct: 164 PGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVII 223
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDD 278
SN+ +DSPFW +HP C NV I N + DS ++ IED YIS GDD
Sbjct: 224 SNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDD 283
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I+IKSGWD+YGIA+GRPS I IR +
Sbjct: 284 LISIKSGWDEYGIAFGRPSSGITIRRIT 311
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 158/242 (65%), Gaps = 10/242 (4%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VGDG TLNT FQ AV+ + KGG QL VP GRWLT FNLT
Sbjct: 37 PGPRPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLT 96
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TL+L + A I+ ++ W ++ PLPSYG G + GPR S I G NL DVVITG+N
Sbjct: 97 SHLTLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNN 156
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+GQG WW+ R LN++R L++ ++S DI+ISN+T +SP W++HP C NV +
Sbjct: 157 GVIDGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKV 216
Query: 250 RNAFISKIQLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
N I K L DSC ++ IED ISV +AI++KSGWD+YGI++GRP+ +I
Sbjct: 217 HNVTI-KTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDI 275
Query: 301 LI 302
I
Sbjct: 276 RI 277
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 153/246 (62%), Gaps = 8/246 (3%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L +FG VGDGVT NT AF+ AV +S+ GG L VP GRWLT FNLTSH
Sbjct: 63 CRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTGNFNLTSH 122
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TLFL DA ILA + E + ++ PLPSYG GR+ G RF S + G NL DVVITG NGT
Sbjct: 123 FTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVVITGENGT 182
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG+ WW K+++ L TR L++IM S I ISN+T +SP W +HP N+ I+
Sbjct: 183 IDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQG 242
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSC + IEDCYI GDD IA+KSGWDQYGI YG P+ +LIR
Sbjct: 243 LTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIR 302
Query: 304 NLVVRS 309
L S
Sbjct: 303 RLTCIS 308
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 159/238 (66%), Gaps = 8/238 (3%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++TDFGGVGDG T NT AF+RAV + +GG QLNVP G WL+ FNLTS+ TLF
Sbjct: 71 VMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLF 130
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A IL ++ WP++ PLPSYG GRE G R S IHG NL +VVITG NGTI+GQ
Sbjct: 131 LERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQ 190
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G+ WW+ + + L +TRG L+++ S +ILISN+TL +SPFWT+HP C NV IRN I
Sbjct: 191 GKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTIL 250
Query: 256 KIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
DS ++ IEDCYI GDD +A+KSGWDQYG+A RPS NI+IR +
Sbjct: 251 APMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRI 308
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 157/241 (65%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT F+L SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFHLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + +WP++ PLPSYG GR+ G R S I G NL DV+ITG NG+I
Sbjct: 99 TLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLIFGLNLTDVIITGANGSI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S++++ISN+T ++SPFW +HP C V +++
Sbjct: 159 DGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I + DS ++ I CY+ G D I IKSGWD+YGI++ +PS NI I +
Sbjct: 219 TILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISD 278
Query: 305 L 305
+
Sbjct: 279 I 279
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 159/239 (66%), Gaps = 9/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG GDG T+NT+AF+ A+ +S++ GG QL VPPG+WLT FNLTSH TLF+
Sbjct: 48 LTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHK 107
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA IL ++E +PL+ LPSYG GR+ G R S I G NL DVVITG NGTI+GQGQ
Sbjct: 108 DAVILGAQDEAAYPLIEILPSYGAGRDGGG-RHASLIFGTNLTDVVITGGNGTIHGQGQY 166
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-NAFISKI 257
WW K+R L +TR L++IM+S + ISN+ L DSP W +HP NV I+ I+ +
Sbjct: 167 WWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPV 226
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DS ++++IEDC+I GDD IA+KSGWDQYGI +G P+ +++IR L S
Sbjct: 227 GSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCIS 285
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 155/239 (64%), Gaps = 8/239 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG VGDG TLNT+AF A+ +S+ GG QL VPPG+WLT FNLTSH TLFL
Sbjct: 57 LTDFGAVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 116
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A ILA ++E WP + LPSYG ++ RF S I G NL DVVITG+NGTI+GQG
Sbjct: 117 GAVILASQDESEWPKLSFLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGST 176
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI-RNAFISKI 257
WW K+++K L TR +++IM+S I ISN+TL +SP W +HP N+ I R ++ +
Sbjct: 177 WWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPV 236
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC +++IED YI GDD IAIKSG D YGI G+PS I++R L S
Sbjct: 237 DVPNTDGIDPDSCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCIS 295
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 159/247 (64%), Gaps = 12/247 (4%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+ RP + ++ +FG VGDG+TLNT AF+ A++ + KGG QL VP G WLT FNLT+
Sbjct: 101 KARPHSVSILEFGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLTN 160
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
H+TLFL A I+A ++ +W ++ LPSYG G R+ S I+GQNL DVVITG NG
Sbjct: 161 HLTLFLERGATIIASQDYSHWDIVDFLPSYGRGIG----RYRSLIYGQNLSDVVITGDNG 216
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG WWK + LN TR L++ + S D++ISN+T DSP W +HP C NV I+
Sbjct: 217 TIDGQGSIWWKLFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQIQ 276
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N F DS +++ IE+ IS G DAI +KSGWDQYGIAYG+P+ N+ I
Sbjct: 277 NITYRAPAEFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHI 336
Query: 303 RNLVVRS 309
N+ ++S
Sbjct: 337 SNVYLQS 343
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 162/248 (65%), Gaps = 8/248 (3%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
S P RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT
Sbjct: 24 CGSNPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLT 83
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
FNLTSH+TLFL A ++ ++ +W ++ PLPSYG G E G R+ S I+G L DV
Sbjct: 84 GSFNLTSHLTLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDV 143
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
V+TG+NGTI+G G WW Y LN++R LV+ + S +++SN+T ++P +++HP
Sbjct: 144 VVTGNNGTIDGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVY 203
Query: 244 CKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
C +V I+N IS + DS +++ IEDC +++G DAI++KSGWD+YGIAYGR
Sbjct: 204 CSHVHIQNVSISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGR 263
Query: 296 PSMNILIR 303
P+ N+ IR
Sbjct: 264 PTENVHIR 271
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 156/245 (63%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ AV+ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A ILA + +W ++ PLPSYG G E G R+ S I+G NL DVVITG NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG AWW+ LN +R +++ + S ILISN+T ++P +HP C + IR
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 253 FISKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS +++ IED I+VG DA+++KSGWDQYGI YGRP+ + IRN
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 305 LVVRS 309
L ++S
Sbjct: 274 LRLKS 278
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 156/245 (63%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ AV+ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A ILA + +W ++ PLPSYG G E G R+ S I+G NL DVVITG NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG AWW+ LN +R +++ + S ILISN+T ++P +HP C + IR
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 253 FISKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS +++ IED I+VG DA+++KSGWDQYGI YGRP+ + IRN
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 305 LVVRS 309
L ++S
Sbjct: 274 LRLKS 278
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 156/245 (63%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A ILA + +W ++ PLPSYG G E G R+ S I+G NL DVVITG NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG AWW+ LN +R +++ + S ILISN+T ++P +HP C + IR
Sbjct: 154 DGQGAAWWEWLETGSLNYSRPHIIEFVSSKHILISNLTFLNAPSINIHPVYCSQIHIRKV 213
Query: 253 FISKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS +++ IED I+VG DA+++KSGWDQYGI YGRP+ + IRN
Sbjct: 214 LIETSVDSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRN 273
Query: 305 LVVRS 309
L ++S
Sbjct: 274 LSLKS 278
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 156/245 (63%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ AV+ + KGG QL VPPG+WLT FNLTSH+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 95
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A ILA + +W ++ PLPSYG G E G R+ S I+G NL DVVITG NGT
Sbjct: 96 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 155
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG AWW+ LN +R +++ + S ILISN+T ++P +HP C + IR
Sbjct: 156 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 215
Query: 253 FISKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DS +++ IED I+VG DA+++KSGWDQYGI YGRP+ + IRN
Sbjct: 216 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 275
Query: 305 LVVRS 309
L ++S
Sbjct: 276 LRLKS 280
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 160/252 (63%), Gaps = 8/252 (3%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
S+P RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT
Sbjct: 31 SKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGS 90
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
NLTSH+TLFL A IL ++ +W L+ PLPSYG G E G R+ S I+G NL+DVVI
Sbjct: 91 INLTSHLTLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVI 150
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
TG +G I+GQG WW + LN +R LV+ S +++SN+T ++P + +HP C
Sbjct: 151 TGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCS 210
Query: 246 NVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
NV + N +S + DS + + IE C I+ G DAIA+KSGWDQYGIAYGRPS
Sbjct: 211 NVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPS 270
Query: 298 MNILIRNLVVRS 309
NI IR + ++S
Sbjct: 271 KNIHIRRVHLQS 282
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 160/252 (63%), Gaps = 8/252 (3%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
S+P RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT
Sbjct: 26 SKPTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGS 85
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
NLTSH+TLFL A IL ++ +W L+ PLPSYG G E G R+ S I+G NL+DVVI
Sbjct: 86 INLTSHLTLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVI 145
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
TG +G I+GQG WW + LN +R LV+ S +++SN+T ++P + +HP C
Sbjct: 146 TGDDGVIDGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCS 205
Query: 246 NVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
NV + N +S + DS + + IE C I+ G DAIA+KSGWDQYGIAYGRPS
Sbjct: 206 NVYVYNISVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPS 265
Query: 298 MNILIRNLVVRS 309
NI IR + ++S
Sbjct: 266 KNIHIRRVHLQS 277
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/251 (46%), Positives = 162/251 (64%), Gaps = 8/251 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P + RP ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG WLT F
Sbjct: 29 NPALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSF 88
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTSH+TLFL A IL ++ +W ++ PLPSYG G E G R+ S I+G L DVVIT
Sbjct: 89 NLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVIT 148
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G+NG I+G G AWW+ + LN +R L++++ S +++SN+T ++P +++HP C N
Sbjct: 149 GNNGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSN 208
Query: 247 VTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I N IS + DS + + IEDC I+ G DAI++KSGWD+YGIAYGRP+
Sbjct: 209 VHIHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTE 268
Query: 299 NILIRNLVVRS 309
N+ IR + +++
Sbjct: 269 NVHIRRVHLQA 279
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 159/245 (64%), Gaps = 8/245 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P + RP ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG WLT F
Sbjct: 40 NPALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSF 99
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
NLTSH+TLFL A IL ++ +W ++ PLPSYG G E G R+ S ++G L DVVIT
Sbjct: 100 NLTSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVIT 159
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G+NG I+G G WW+ + LN +R L++++ S+ +++SN+T ++P +++HP C N
Sbjct: 160 GNNGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSN 219
Query: 247 VTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V I N IS Q + DS + + IEDC I+ G DAI++KSGWD+YGIAYGRP+
Sbjct: 220 VHIHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTE 279
Query: 299 NILIR 303
N+ IR
Sbjct: 280 NVHIR 284
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 157/245 (64%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ AV+ KGG +L VP G+WLT FNLTSH+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A I+A ++ +W M PLPSYG G + R+ S I+GQNL DVVITG NG I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGII 155
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW LN +R +++++ S +I+ISN+T +SP W++HP C N+ I+
Sbjct: 156 DGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKI 215
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ F DS E + I++C IS G DAI +KSGWD+YG+AYG+P+ N+ IR
Sbjct: 216 TVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRG 275
Query: 305 LVVRS 309
+ ++S
Sbjct: 276 VYLQS 280
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 156/248 (62%), Gaps = 8/248 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +T+FG VG+G TLNT FQ AV+ KGG QL VP GRWLT FNLT
Sbjct: 36 PGSRPHSVTITEFGAVGNGRTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLT 95
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL + A I+ + WP++ PLPSYG G + GPR S I+G N+ DVVITG+N
Sbjct: 96 SHLTLFLEEGAVIIGAKESSQWPIVEPLPSYGQGLDLPGPRHLSLINGYNVTDVVITGNN 155
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G INGQG WW LN++R LV+ + S +I+ISN+T +SP W++HP C V +
Sbjct: 156 GVINGQGSIWWDWLHSHELNHSRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKV 215
Query: 250 RNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N I + DS ++VIED ISV DAI+IKSGWD+YGI+ G+P+ +I
Sbjct: 216 HNVTIKTSSDAPLTDGIVPDSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIH 275
Query: 302 IRNLVVRS 309
I + +++
Sbjct: 276 ISRMDLQA 283
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 157/247 (63%), Gaps = 10/247 (4%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
R + +L DFGGVGDG T NT+AF+ A+ +S+ +GG QL VP G+WLT F+L SH
Sbjct: 50 CRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISH 109
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL+L DA +LA ++ WP++ PLPSYG GR+ R S I G NL DV++TG NGT
Sbjct: 110 FTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGT 169
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT--- 248
I+GQG WW+++ K L TR L+++M+S +I ISN+TL DSP W +HP N+
Sbjct: 170 IDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKG 229
Query: 249 ------IRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
IR+ I DSC + IEDCYI GDD +A+KSGWD+YGI +G P+ ++I
Sbjct: 230 ITIIAPIRSPNTDGINP-DSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVI 288
Query: 303 RNLVVRS 309
R L S
Sbjct: 289 RRLTCIS 295
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 158/244 (64%), Gaps = 8/244 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +TDFG VGDG TLNT AFQ AV+ + KGG QL VPPGRWLT FNLT
Sbjct: 34 PNERPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLT 93
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL DA ILA ++ +W + LPSYG G + G R+ S I+G L DVV+TG N
Sbjct: 94 SHLTLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDN 153
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG WW ++ L +R LV+ + S ++++SN+T ++P +T+H C N+ I
Sbjct: 154 GTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYI 213
Query: 250 R--NAFISKIQLF------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
A S + DS E++ I+D I++G DAI++KSGWD+YGI+Y RP+ N+
Sbjct: 214 HRVTANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQ 273
Query: 302 IRNL 305
I+N+
Sbjct: 274 IKNV 277
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 160/243 (65%), Gaps = 8/243 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+ R ++ DFGG+GDG TLNT AF+ A+Y I L ++GG L +PPG +LT FNLTS
Sbjct: 35 KYRNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTS 94
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTL+LA A I A+++ WP++ PLPSYG GRE G R+ S IHG + DVVITG NG
Sbjct: 95 HMTLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENG 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
TI+GQG AWW +R L TR LV+ + S +I+ISN+ +SPFW +HP C+NV +R
Sbjct: 155 TIDGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVR 214
Query: 251 NAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I + DS ++ IED YIS GDD +A+KSGWD+YGIAYGR S +I I
Sbjct: 215 YVTILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITI 274
Query: 303 RNL 305
R +
Sbjct: 275 RRI 277
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 164/251 (65%), Gaps = 12/251 (4%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTA 124
S P PR R A ++ FG GDG TLNT AF RAV I++ GG L VPPG WLT
Sbjct: 34 SGPAPR-RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTG 92
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
PFNLTSHMTLFLA A + A ++ WPL+ PLP YG GRE G R+ S IHG L+DV
Sbjct: 93 PFNLTSHMTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVF 152
Query: 185 ITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
ITG NGTI+GQG WW ++++ L TR L+++M+S+D+++SN+ +DSPFW +HP C
Sbjct: 153 ITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYC 212
Query: 245 KNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
NV I N + I L DS ++ +EDCYIS GDD I+IKSGWD+YG+A+GR
Sbjct: 213 SNVVIANLTVLAPHDSPNTDGIDL-DSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGR 271
Query: 296 PSMNILIRNLV 306
PS I +R +
Sbjct: 272 PSSGITVRRIT 282
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/242 (48%), Positives = 157/242 (64%), Gaps = 8/242 (3%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +++FG VGDGVT+NT FQ A++ + KGG QL VP GRWLT FNLTSH+T+F
Sbjct: 42 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 101
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L DA I+ + WP++ PLPSYG G + G R S I+G N+ DVVITG+NG I+GQ
Sbjct: 102 LEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDGQ 161
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN-----VTIR 250
G WW +R LN +R LV+ + S DI+ISN+TL +SP W +HP C N VTIR
Sbjct: 162 GLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIR 221
Query: 251 NAFISKIQ---LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ + + + DSC +M IED ISV DAI++KSGWD YGI GRP+ +I I + +
Sbjct: 222 TSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDL 281
Query: 308 RS 309
++
Sbjct: 282 QA 283
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 148/231 (64%), Gaps = 8/231 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT FNL SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 99 TLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S+ ++ISN+T ++SPFW +HP C V + +
Sbjct: 159 DGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
I + DS ++ I CY+ GDD I IKSGWD+YGI++ +
Sbjct: 219 TILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQ 269
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/287 (43%), Positives = 172/287 (59%), Gaps = 20/287 (6%)
Query: 31 KTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVT 90
K+L VL L A ++ + N G G + + RP + ++ +FG VGDG+T
Sbjct: 24 KSLVAVLLLVAISTAV--ESNGEDNG------GPCKQNAFKARPHSVSILEFGAVGDGIT 75
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
LNT AF+ A++ + KGG QL VP G+WLT FNLTSH+TLFL A I+A ++ +
Sbjct: 76 LNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGAIIIASQDYSH 135
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN 210
W ++ LPSYG G R+ S I+GQNL DVVITG NGTI+GQG WW+ + LN
Sbjct: 136 WDIVDFLPSYGRGIG----RYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLNY 191
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DS 262
+R L++ + S DI+ISN+T DSP W +HP C NV I+N F DS
Sbjct: 192 SRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPDS 251
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ IE+ IS G DA+ +KSGWDQYGIAYG+P+ ++ I N+ ++S
Sbjct: 252 SRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQS 298
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 148/231 (64%), Gaps = 8/231 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + +T+FG VGDGVTLNT+AFQ A++ ++ KGG QL VP GRWLT FNL SH+
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGGFNLISHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL L DA I+ + WP++ PLPSYG GRE G R S I G NL DV+ITG NGTI
Sbjct: 99 TLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQSLIFGSNLTDVIITGANGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW + LN TR LV++M+S+ ++ISN+T ++SPFW +HP C V + +
Sbjct: 159 DGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHV 218
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
I + DS ++ I CY+ GDD I IKSGWD+YGI++ +
Sbjct: 219 TILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQ 269
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 161/251 (64%), Gaps = 8/251 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
+P + RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT F
Sbjct: 31 KPSLKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSF 90
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+LTSH+TLF+ A IL ++ +W L+ PLPSYG G E G R+ S I+G L DVV+T
Sbjct: 91 SLTSHLTLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVT 150
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG WW + LN +R LV+ S +++SN+T ++P +++HP C N
Sbjct: 151 GDNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSN 210
Query: 247 VTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V ++N +S + DS ++ IED I VG DAI++KSGWD+YGIAY RP+
Sbjct: 211 VVVQNISVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTT 270
Query: 299 NILIRNLVVRS 309
++ IR + ++S
Sbjct: 271 DVYIRRVYLQS 281
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 152/228 (66%), Gaps = 8/228 (3%)
Query: 90 TLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK 149
TL+T AFQ AV +I + GG L VPPG WLT PFNLTSHMTLFLA A I A ++
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 150 YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLN 209
WPL+ PL SYG GRE G R+ S IHG L+DVVITG NGTI+GQG AWW +++ L
Sbjct: 116 SWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 210 NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------D 261
TR L+++M SSD+++SN+ +DSPFW +HP C NV IRN + D
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPD 235
Query: 262 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
S ++ IEDCYIS GDD IAIKSGWD+YG+AYGRPS +I IR + S
Sbjct: 236 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSS 283
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 160/241 (66%), Gaps = 8/241 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++ DFGGVGDG T NTE+F+RA+ + + +GG QLN+P G WLT FNLTS+
Sbjct: 71 RKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNF 130
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A ILA ++ K WP++ PLPSYG GRE G R S IHG + +VVITG NGT+
Sbjct: 131 TLFLHHGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTV 190
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR-- 250
+GQG+ WW+ + + L +TRG L++++ S ++LISN+T R+SPFWT+HP C NV ++
Sbjct: 191 DGQGRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGM 250
Query: 251 ------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
NA + DS ++ IED YI GDD +AIKSGWD YGI PS NI++R
Sbjct: 251 TILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRR 310
Query: 305 L 305
+
Sbjct: 311 I 311
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 160/248 (64%), Gaps = 8/248 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +TDFG VGDG TLNT AFQ AV+ + KGG QL VPPGRWLT FNLT
Sbjct: 34 PSERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLT 93
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL DA ILA ++ +W + LPSYG G + G R+ S I+G L DVV+TG N
Sbjct: 94 SHLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDN 153
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG WW ++ L +R LV+ + + ++++SN+T ++P +T+H C+N+ I
Sbjct: 154 GTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYI 213
Query: 250 RNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
+ + DS E++ I++ I++G DAI++KSG D+YG++Y RP+ N+
Sbjct: 214 HRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQ 273
Query: 302 IRNLVVRS 309
IRN+ +R+
Sbjct: 274 IRNVYLRA 281
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/248 (44%), Positives = 160/248 (64%), Gaps = 8/248 (3%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P RP + +TDFG VGDG TLNT AFQ AV+ + KGG QL VPPGRWLT FNLT
Sbjct: 36 PSERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLT 95
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SH+TLFL DA ILA ++ +W + LPSYG G + G R+ S I+G L DVV+TG N
Sbjct: 96 SHLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDN 155
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG WW ++ L +R LV+ + + ++++SN+T ++P +T+H C+N+ I
Sbjct: 156 GTIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYI 215
Query: 250 RNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
+ + DS E++ I++ I++G DAI++KSG D+YG++Y RP+ N+
Sbjct: 216 HRVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQ 275
Query: 302 IRNLVVRS 309
IRN+ +R+
Sbjct: 276 IRNVYLRA 283
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 160/251 (63%), Gaps = 8/251 (3%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
+P + RP + ++ +FG VGDG TLNT AFQ A++ + KGG QL VPPG+WLT F
Sbjct: 29 KPGLKPRPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSF 88
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+LTSH+TLFL A IL ++ +W L+ PLPSYG G E G R+ S I+G L DVV+T
Sbjct: 89 SLTSHLTLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVT 148
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G NGTI+GQG WW + LN +R LV+ S +++SN+T ++P + +HP C N
Sbjct: 149 GDNGTIDGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSN 208
Query: 247 VTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V ++N +S + DS ++ IED I VG DAI++KSGWD+YGIAY RP+
Sbjct: 209 VLVQNISVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQ 268
Query: 299 NILIRNLVVRS 309
++ IR + ++S
Sbjct: 269 DVHIRRVYLQS 279
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 154/241 (63%), Gaps = 10/241 (4%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG VGDG T NT+AF A+ +SK GG QL VP G+WLT FNLTSH TLFL
Sbjct: 16 LTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGSFNLTSHFTLFLHK 75
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHG-PRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
DA +LA ++E WPL+ PLPSYG RE+ R G I N+ DV+ITG+NGT++GQG
Sbjct: 76 DAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVIITGNNGTVDGQGA 135
Query: 198 AWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
WW+K+ +K L P L++IM+S + ISNITL +SP W +HP N+ I+ I +
Sbjct: 136 VWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSNLWIQGVTILA 195
Query: 256 KIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ + DSC +++IEDCYI GDD IA+KSG DQYGI G P ++IR +
Sbjct: 196 PVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCI 255
Query: 309 S 309
S
Sbjct: 256 S 256
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 155/247 (62%), Gaps = 15/247 (6%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++T+F GVG+ TLNT+ F+ A S GG L VPPG +LT F+LTSH
Sbjct: 63 RADNISITEFVGVGNERTLNTKTFREA---FSTCHXDGGTLLYVPPGVYLTETFHLTSHR 119
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+LA I+A ++ WPL+ PLPSYG GRE R+ SFIHG + DVVITG NGTI
Sbjct: 120 TLYLATGTIIMATQDSSNWPLIAPLPSYGRGRERPAGRYMSFIHGDGVXDVVITGENGTI 179
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW K++Q+ L TR LV+ + S DI+ISN+ + SPFW +HP+ C NV +R
Sbjct: 180 DGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSNVVVR-- 237
Query: 253 FISKIQLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+++ + D S ++ IED YIS GDD +A KSGWD+YGI YGRPS +I I
Sbjct: 238 YVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITI 297
Query: 303 RNLVVRS 309
R + S
Sbjct: 298 RRVTGSS 304
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 167/263 (63%), Gaps = 24/263 (9%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTA 124
S P PR R A ++ FG GDG TLNT AF RAV I++ GG L VPPG WLT
Sbjct: 34 SGPAPR-RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTG 92
Query: 125 PFNLTSHMTLFLADDA------------EILAIENEKYWPLMPPLPSYGYGREHHGPRFG 172
PFNLTSHMTLFLA A E+++ ++ WPL+ PLPSYG GRE G R+
Sbjct: 93 PFNLTSHMTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYM 152
Query: 173 SFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLR 232
S IHG L+DV ITG NGTI+GQG WW ++++ L TR L+++M+S+D+++SN+ +
Sbjct: 153 SLIHGHGLQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQ 212
Query: 233 DSPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIK 283
DSPFW +HP C NV I N + I L DS ++ +EDCYIS GDD I+IK
Sbjct: 213 DSPFWNIHPVYCSNVVIANLTVLAPHDSPNTDGIDL-DSSSNVCVEDCYISAGDDLISIK 271
Query: 284 SGWDQYGIAYGRPSMNILIRNLV 306
SGWD+YG+A+GRPS I +R +
Sbjct: 272 SGWDEYGVAFGRPSSGITVRRIT 294
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 158/233 (67%), Gaps = 8/233 (3%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++ DFGGVGDG T NT++FQRA+ + + KGG QLN+P G WLT FNLTS TLFL
Sbjct: 77 SIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFNLTSDFTLFLH 136
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A +L ++ K WP++ PLPSYG GRE G R S IH +++VVITG NGT++GQG+
Sbjct: 137 HGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGR 196
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR------- 250
WW+ + + L +TRG L+++M S ++L+SN+T R+SPFWT+HP C NV I+
Sbjct: 197 MWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAP 256
Query: 251 -NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
NA + DS ++ IED YI GDD +AIKSGWDQYGIA +PS NI++
Sbjct: 257 LNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIV 309
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 152/245 (62%), Gaps = 8/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ +FG VGDG TLNT AFQ AV+ KGG +L VP G+WLT FNLTSH+
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL A I+A ++ +W M PLPSYG G + R+ S I+GQNL DVVITG N I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGRYRSLIYGQNLSDVVITGDNAII 155
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW LN +R +++++ S +I ISN+T +SP W++HP C NV I+
Sbjct: 156 DGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKI 215
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ F DS E + I + IS G DAI +KSGWDQYG+AYG+P+ + IR
Sbjct: 216 TVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRG 275
Query: 305 LVVRS 309
+ ++S
Sbjct: 276 VYLQS 280
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 161/252 (63%), Gaps = 8/252 (3%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
++P RP + ++ +FG VGDG TLNT +FQ A++ + KGG +L VPPGRWLT
Sbjct: 28 NKPSLDPRPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGS 87
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
FNLTSH+TLFL A IL ++ ++ L+ PLPSYG G E G R+ S I+G L+DVVI
Sbjct: 88 FNLTSHLTLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVI 147
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
TG NGTI+GQG WW + LN +R LV+ + S I++SN+T ++P + +HP C
Sbjct: 148 TGDNGTIDGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCS 207
Query: 246 NVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
NV ++N +S + DS ++ IE+ I +G DAI++KSGWD+YGIAY R +
Sbjct: 208 NVLVQNMSLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRAT 267
Query: 298 MNILIRNLVVRS 309
++ IR + ++S
Sbjct: 268 RDVHIRRVHLQS 279
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 155/244 (63%), Gaps = 8/244 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++TDFG VGDG TLNT AFQ AV+ + KGG QL VPPG WLT F+LTSH+
Sbjct: 39 RPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSLTSHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A I+A ++ +W ++ PLPSYG G + G R+ S I+G L DVV+TG NGTI
Sbjct: 99 TLFLENGAVIVASQDPSHWEVVDPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGDNGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW ++ L R L++ + S ++++SN+T ++P +T+H +V I
Sbjct: 159 DGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVYIHKI 218
Query: 253 FISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DS + I++ I+VG DAI++KSGWD+YGIAY RP+ N+ IRN
Sbjct: 219 LAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRN 278
Query: 305 LVVR 308
+ +R
Sbjct: 279 VYLR 282
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 146/220 (66%), Gaps = 18/220 (8%)
Query: 90 TLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK 149
TL+T AFQ AV +I + GG L VPPG WLT PFNLTSHMTLFLA A I A ++
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 150 YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLN 209
WPL+ PLPSYG GRE G R+ S IHG L+DVVITG NGTI+GQG AWW +++ L
Sbjct: 116 SWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 210 NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCEDMVIE 269
TR L+++M SSD+++SN+ +DSPFW +HP C + ++ IE
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSS------------------NVCIE 217
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DCYIS GDD IAIKSGWD+YG+AYGRPS +I IR + S
Sbjct: 218 DCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSS 257
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 155/249 (62%), Gaps = 14/249 (5%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+R +FN+ D+G VGD VT+NT F + V ++ G G++ +PPG +++ FNLTSH
Sbjct: 51 VRSKSFNIVDYGAVGDNVTVNTAVFNKIVALVAA---NGDGEIYIPPGIFVSGTFNLTSH 107
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP-RFGSFIHGQNLKDVVITGHNG 190
+TL LA A + N ++P LPSYG GRE R+ S +HG+NL DVVIT NG
Sbjct: 108 VTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSDNG 167
Query: 191 --TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
I+G G WW +R L TRG LV++M+++DI++ N+ LR+SPFWT+HPY NV
Sbjct: 168 QGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTNVL 227
Query: 249 IRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
+ N I+ DSC +VI++C +VGDD IA+KSGWD GI YG P+ ++
Sbjct: 228 VSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDV 287
Query: 301 LIRNLVVRS 309
+IRN+ + +
Sbjct: 288 VIRNMTMHT 296
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 156/244 (63%), Gaps = 8/244 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++TDFG VGDG TLNT AFQ AV+ + KGG QL VPPG WLT F+LTSH+
Sbjct: 39 RPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHL 98
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TLFL + A I+A ++ +W ++ PLPSYG G + G R+ S I+G L DVV+TG NGTI
Sbjct: 99 TLFLENGAVIVASQDPSHWEVVDPLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTI 158
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW ++ L R L++ + S ++++SN+T ++P ++++ +V I
Sbjct: 159 DGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKI 218
Query: 253 FISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ DS + + I++ I+VG DAI++KSGWD+YGIAY RP+ N+ IRN
Sbjct: 219 LAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRN 278
Query: 305 LVVR 308
+ +R
Sbjct: 279 VYLR 282
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 154/245 (62%), Gaps = 9/245 (3%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++ DFG VG G T+N AFQ A++ + KGG Q NVP G+WLT N T
Sbjct: 65 RPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSINFTCTY 124
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
T+ L DA ILA E+ +W ++ LPSYG G E R+ S I G NL DVVITG+NGTI
Sbjct: 125 TV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNNGTI 183
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW+K+ LN TR LV+ + S +++ISN+TL ++P W + P C NV I+N
Sbjct: 184 DGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNL 243
Query: 253 FISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ Q + DS E + IE+ IS+G DAI +KSGWD+YGI+YG+P+ N+ IR
Sbjct: 244 TVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRR 303
Query: 305 LVVRS 309
+ ++S
Sbjct: 304 VRLQS 308
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 147/241 (60%), Gaps = 11/241 (4%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FNLT FG +GDG N+ A A+ A+ + GGG + +PPG +L APFN+TSH+ L+L
Sbjct: 74 FNLTAFGAIGDGRHNNSLAMAAALEAVQQ---SGGGTIYIPPGDFLLAPFNMTSHLVLYL 130
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ + A + WP++PP+PSYG GR+H GPR SF+HG NL DV +TG+NGTIN G
Sbjct: 131 EAGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTGNNGTINATG 190
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHP-----YDCKNVTIRN 251
WW ++ TRG L ++MWS + +S++TL SPFWT+HP + ++TI N
Sbjct: 191 DIWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILN 250
Query: 252 AFISKIQLF---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
S DS D+VI DCY S GDD++AIKSGWD YG S NI I N V
Sbjct: 251 PPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFH 310
Query: 309 S 309
S
Sbjct: 311 S 311
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 155/248 (62%), Gaps = 9/248 (3%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTAPFNLT 129
+ R ++ DFG VGDG TLNT AF A+ I G L +VP G +LT FNLT
Sbjct: 39 KHRTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLT 98
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
SHMTL+LAD A I A+++ W L PLPSYG GRE G R+ SFIHG L DVVITG N
Sbjct: 99 SHMTLYLADGAVIKAVQDTGKWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRN 158
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
GTI+GQG+ WW +R L TR L++ S++I++S++ L++S FWTLHP C NV +
Sbjct: 159 GTIDGQGEPWWNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVV 218
Query: 250 RNAFI-SKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
+ I + F DS ++ IED YIS GDD +A+KSGWD+YGIAY PS +I
Sbjct: 219 HHVTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDIT 278
Query: 302 IRNLVVRS 309
IR + S
Sbjct: 279 IRRITGSS 286
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 125/175 (71%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R +T++G VGDG TLNT AF RAV +++ GG L VPPG+WLT PFNLT
Sbjct: 38 PGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLT 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S TL+L + AEILA ++ K+WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG N
Sbjct: 98 SCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKN 157
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
GTINGQGQ WW K+ K L TRG L+++++S +I+ISN+T D+P+W LHP C
Sbjct: 158 GTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYC 212
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 108 KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
KGG +L VP GRWLT FNL SH+T+ L DA I+ ++ WP++ PLPSYG GRE
Sbjct: 44 NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELP 103
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILIS 227
G R S I G NL DV+ITG NGTI+GQG+ WW + LN TR PL+++M+S ++IS
Sbjct: 104 GKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVIS 163
Query: 228 NITLRDSPFWTLHPYDCKNVTIRN----AFISKIQLF----DSCEDMVIEDCYISVGDDA 279
N+T ++PFW +HP C V +++ A IS DS ++ IEDCYI GDD
Sbjct: 164 NLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDI 223
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRNLV 306
+ IKSGWD+YGI++ PS NI IRN+
Sbjct: 224 VVIKSGWDEYGISFAHPSSNISIRNIT 250
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 155/262 (59%), Gaps = 25/262 (9%)
Query: 59 FLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEA-FQRAVYAISKLGKKGGGQLNVP 117
F RW +++ L+P NL V LN + ++ +Y I++L G L
Sbjct: 166 FARWKLSNY----LKPITLNLCKVYLVLFNFVLNMPSLYKLCLYCINRLESNKLGSL--- 218
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
P L H + +A + ++N + WP++ PLPSYG GRE G R S I+G
Sbjct: 219 ---ICFGPCGL--HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYG 273
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFW 237
NL DV+ITG+NGTI+GQG WW K+R K L++TR LV+++ S+++LISN T +SPFW
Sbjct: 274 CNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFW 333
Query: 238 TLHPYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGWD 287
T+HP C NVT++N I I F DS +++ IEDCYIS GDD I+IKSGWD
Sbjct: 334 TIHPVYCSNVTVQNVTI--IVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWD 391
Query: 288 QYGIAYGRPSMNILIRNLVVRS 309
+YGI++GRPS NI I L R+
Sbjct: 392 EYGISFGRPSTNISIHRLTGRT 413
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
I +RP + ++T+FG VGDG+TLNT+AFQ A++ ++ KGG +L VP GRWLT F+L
Sbjct: 74 IKEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDL 133
Query: 129 TSHMTLFLADDAEILA 144
SH+TL+L DA IL
Sbjct: 134 ISHLTLWLDKDAVILG 149
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 8/182 (4%)
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
MTLFLA A + A ++ + WPL+ PLPSYG GRE GPR+ SFIHG L+DVVITG G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 192 INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
I+GQG+ WW +R++ L +TR LV+ M S+ I ISNI L++SPFW +HP C NV + N
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I + DS ++ IED YIS GDD +AIKSGWD+YGIAYGRPS + +R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 304 NL 305
+
Sbjct: 181 RV 182
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 119/166 (71%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R +T++G VGDG TLNT AF RAV +++ GG L VPPG+WLT PFNLT
Sbjct: 38 PGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLT 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S TL+L + AEILA ++ K+WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG N
Sbjct: 98 SCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKN 157
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSP 235
GTINGQGQ WW K+ K L TRG L+++++S +I+ISN+T D+P
Sbjct: 158 GTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ-LNVPPGRWLTAPFNLTSHMTLFL 136
++ +FG VGDG TLNT AF+RAV + GGG L+VPPGRWLT FNLTS TLFL
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A IL ++ + WPL+ PLPSYG GRE GPR S IHG+ L DVVITG NGTI+GQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
WW+ +R + LN+TRG L++++ S+++LIS++TL +SPFWT+HP C NV +++ I
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTI 266
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 122/182 (67%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R + +LTDFGGVGDG T NT+AFQ A+ +S+ KGG QL VP G+WLT F+L SH
Sbjct: 51 RTHSASLTDFGGVGDGKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHF 110
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L DA +LA ++ WP + PLPSYG GR+ R+ S I G NL DV++TG NGTI
Sbjct: 111 TLYLNKDAVLLASQDISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTI 170
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
+GQG WW+K+ +K L TR L+++M+S I ISN+TL +SP W LHP N+ I+
Sbjct: 171 DGQGAFWWQKFHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGL 230
Query: 253 FI 254
I
Sbjct: 231 TI 232
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ-LNVPPGRWLTAPFNLTSHMTLFL 136
++ +FG VGDG TLNT AF+RAV + GGG L+VPPGRWLT FNLTS TLFL
Sbjct: 89 SVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLTGSFNLTSRFTLFL 148
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A IL ++ + WPL+ PLPSYG GRE GPR S IHG+ L DVVITG NGTI+GQG
Sbjct: 149 HRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDVVITGSNGTIDGQG 208
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
WW+ +R + LN+TRG L++++ S+++LIS++TL +SPFWT+HP C++V
Sbjct: 209 HMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCRSV 259
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 139/235 (59%), Gaps = 7/235 (2%)
Query: 25 AFLSSHK----TLFTVLWLAAFASVFIWQ-RNAVVGGFSFLRWGVASRPIPRLRPAAFNL 79
AFL S + +FT L SV I + RN + F+ + + R L
Sbjct: 3 AFLESGRYHYLEIFTALVFVGSISVGIAESRNVQI--FNKDSYNAVNYAAINCRKHTAFL 60
Query: 80 TDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADD 139
TDFGGVGDG TLNT+AFQ A+ +S+ GG +L VP G+WLT FNLTSH TLFL
Sbjct: 61 TDFGGVGDGKTLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHFTLFLHRG 120
Query: 140 AEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW 199
A ILA +NE +P++ LPS+G ++ RF S I G NL DVVITG+NGTI+GQG W
Sbjct: 121 ATILASQNEADFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDGQGAPW 180
Query: 200 WKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
W K+ + L +R L+ IM++ + ISNITL +SP W +HP C NV ++ I
Sbjct: 181 WDKFEKGLFKASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTI 235
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 138/234 (58%), Gaps = 20/234 (8%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGR------WLTAPFNLTSHMTLFLADDAEILAI 145
+T AF++A+ I GGG+L +P + P NLTSH+ LFL +A I AI
Sbjct: 27 DTAAFEQAIDIIRS---NGGGRLIIPGAPDGSFNLYRIRPINLTSHLVLFLQKNAVITAI 83
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH---NGTINGQGQAWWKK 202
+E WPL+PPLPSYG GR+H GPR+ S +HG+ L ++ I G G I+GQG+ WW +
Sbjct: 84 ADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQGRYWWDR 143
Query: 203 YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-- 260
R TRG LV+ M+SS I + N+ L++SPFWT H YDC +V ++N +
Sbjct: 144 RRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKAPWSSPN 203
Query: 261 ------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DS +++IED GDD +AIKSGWD +GI Y PS NI IRN+ +
Sbjct: 204 TDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQ 257
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 126/197 (63%), Gaps = 17/197 (8%)
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WL +P +LTS + +L +E+ WPL+ PLPSYG GR+ GPR+ +FI G NL
Sbjct: 13 WLHSPRDLTS------LTNRPVLDLED---WPLIAPLPSYGRGRDEPGPRYSNFIGGSNL 63
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
DV+I+G+NGTINGQGQ WW K+ K L+ TRG L+++++S DI+ISN+T D+P W LH
Sbjct: 64 TDVIISGNNGTINGQGQVWWDKFHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLH 123
Query: 241 PYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P C NVTI I + DS + IEDCYI GDD IA+KSGWD+YGI
Sbjct: 124 PTYCTNVTISGVTILAPVHSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIR 183
Query: 293 YGRPSMNILIRNLVVRS 309
+ PS +I++R L S
Sbjct: 184 FNMPSQHIVVRRLTCIS 200
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 8/212 (3%)
Query: 105 KLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGR 164
KGG QL VPPG WLT F+LTSH+TLFL +DA I+A ++ +W ++ PLPSYG G
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 165 EHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDI 224
+ G R+ S I+G L DVV+TG NGTI+GQG WW ++ L R L++ + S ++
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRN--AFISKIQLF------DSCEDMVIEDCYISVG 276
++SN+T ++P ++++ +V I A S + DS + + I++ I+VG
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DAI++KSGWD+YGIAY RP+ N+ IRN+ +R
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLR 213
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 13/201 (6%)
Query: 116 VPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF 174
VPPG R L AP NLTSH TL +A +A + + + WPL+P PSYG GR+H GPR+ S
Sbjct: 45 VPPGARCLIAPINLTSHTTLRIAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSL 104
Query: 175 IHGQNLKDVVITGHNGT--INGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLR 232
+HG++++DV I G T ++G GQ WW + + TRG L++ M+S DI I ++++R
Sbjct: 105 VHGEHVEDVTIQGEGPTSVLDGNGQYWWDQVHSMTV--TRGHLIEFMYSKDIRIYDLSMR 162
Query: 233 DSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKS 284
DSPFW H YD + V +RN IS DS D+++E GDD +AIKS
Sbjct: 163 DSPFWNNHFYDSERVHVRNVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKS 222
Query: 285 GWDQYGIAYGRPSMNILIRNL 305
GWD +G+AYG+PS NI IR++
Sbjct: 223 GWDCFGVAYGKPSRNITIRDV 243
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 148/239 (61%), Gaps = 13/239 (5%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+ +FG GDG T NT+AF+ A+ +SK GG L VPPG+WLT FNLTSH TL++
Sbjct: 44 VMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHLIVPPGKWLTGSFNLTSHFTLYIHK 103
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
DA IL ++E +P++ LPSYG RF S I G NL DVVITG NGT NGQG+
Sbjct: 104 DAIILGSQDESDYPIVKALPSYG----GTAGRFSSLILGTNLTDVVITGGNGTTNGQGKP 159
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKI 257
WW K+ +K LN TR L++I++S + I+ TL DSP W +HP +NV I+ I+ +
Sbjct: 160 WWDKFHEKRLNATRPNLIEIVFSYQVQITX-TLIDSPSWNVHPIYSRNVIIQGLTIIAPV 218
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC ++ +EDCYI GDD+IA+KS ++ G+ G P+ ++IR L S
Sbjct: 219 TVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCIS 277
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 116/171 (67%), Gaps = 5/171 (2%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R RP ++T+FGGVGDG TLNT A ++AVY I + G L +P G WL+ FNLTS
Sbjct: 97 RPRPEVVSITEFGGVGDGRTLNTWALRKAVYRI-----QCGTTLLLPVGTWLSGSFNLTS 151
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
HMTLFLA A + A ++ + W LM PLPSYG GRE G R+ SFIHG L+DVVITG G
Sbjct: 152 HMTLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKG 211
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
I+GQG WW +R++ L +TR LV+ + SS I ISN+ L++S FW +HP
Sbjct: 212 VIDGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHP 262
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 117/174 (67%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R + +L DFGGVGDG T NT+AF+ A+ +S+ +GG QL VP G+WLT F+L SH
Sbjct: 7 RAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHF 66
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL+L DA +LA ++ WP++ PLPSYG GR+ R S I G NL DV++TG NGTI
Sbjct: 67 TLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTI 126
Query: 193 NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
+GQG WW+++ K L TR L+++M+S +I ISN+TL DSP W +HP N
Sbjct: 127 DGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSN 180
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 8/212 (3%)
Query: 105 KLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGR 164
KGG QL VPPG WLT F+LTSH+TLFL + A I+A ++ +W ++ PLPSYG G
Sbjct: 2 SFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGI 61
Query: 165 EHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDI 224
+ G R+ S I+G L DVV+TG NGTI+GQG WW ++ L R L++ + S ++
Sbjct: 62 DLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENV 121
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRN--AFISKIQLF------DSCEDMVIEDCYISVG 276
++SN+T ++P ++++ +V I A S + DS + + I++ I+VG
Sbjct: 122 IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVG 181
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DAI++KSGWD+YGIAY RP+ N+ IRN+ +R
Sbjct: 182 YDAISLKSGWDEYGIAYSRPTENVHIRNVYLR 213
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTA 124
S P PR R A ++ FG GDG TLNT AF RAV I++ GG L VPPG WLT
Sbjct: 34 SGPAPR-RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTG 92
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
PFNLTSHMTLFLA A + A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV
Sbjct: 93 PFNLTSHMTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVF 152
Query: 185 ITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
ITG NGTI+GQG WW ++++ L TR L+++M+S+D+++SN+ +DSPFW +HP C
Sbjct: 153 ITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYC 212
Query: 245 KNVTIRN 251
NV I N
Sbjct: 213 SNVVIAN 219
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 114/167 (68%), Gaps = 8/167 (4%)
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN 210
+PL+ PLPSYG GR+ G RF S I G NL DVVITG NGTI+GQG+ WW K+R LN+
Sbjct: 4 YPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELNH 63
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKIQL-------FDS 262
TR L++IM+S++I ISN+TL +SP W +HP C NV ++ ++ ++ DS
Sbjct: 64 TRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDS 123
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C + I+DCYI GDD +A+KSGWD+YGIA+G P+ ++IR L S
Sbjct: 124 CTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCIS 170
>gi|357450135|ref|XP_003595344.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355484392|gb|AES65595.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 297
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 102/157 (64%), Gaps = 33/157 (21%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+LRP FNLTDF G GG QLNVPPG WLTAPFNLT
Sbjct: 133 PKLRPVVFNLTDFDG-------------------------GGAQLNVPPGLWLTAPFNLT 167
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG-- 187
SHM+ + ++I +EKYWPLMP LPSYGYGREH GPR+ S IHGQNL +V +
Sbjct: 168 SHMSKCMKTYSKI---NDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLTEVSLESCP 224
Query: 188 ---HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWS 221
HNGTI+GQG+ WW KYRQ LLN+TRGPLVQIMWS
Sbjct: 225 ILRHNGTIDGQGRTWWTKYRQNLLNHTRGPLVQIMWS 261
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 114/178 (64%), Gaps = 7/178 (3%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG +GDG T NT+AF+ A+ ++ GG QL VP G+WLT FNLTSH TL + +
Sbjct: 57 LTDFGAIGDGKTSNTKAFREAIRNLTSRAGDGGSQLIVPKGKWLTGSFNLTSHFTLHIKE 116
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A ILA ++E +P++ LPSY RF S I+G NL DVVI G GTINGQG++
Sbjct: 117 GATILASQDESEYPMLQVLPSY------RDTRFASLIYGSNLTDVVIAGDKGTINGQGKS 170
Query: 199 WWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
WW KYR + + P L++I S ++ ISNI L DSP W++HP C+NV I+ IS
Sbjct: 171 WWAKYRNGGFKSIQRPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKGVKIS 228
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 8/169 (4%)
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ 205
++ K+WPL+ PLPSYG GR+ G R+ +FI G NL DV+ITG NGTING+GQ WW K+
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 206 KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQL 259
K L RG L+++++S +I+ISN+T ++P+W LHP C NVTI I
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 260 FD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
D S + IEDCYI GDD +A+KSGWD+YGI + PS +I+I+ L
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLT 192
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 115/186 (61%), Gaps = 15/186 (8%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
I +RP + ++T+FG VGD +TLNT+AFQ A++ + KGG +L VP GRW T F+L
Sbjct: 34 IKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLFVPAGRWFTGSFDL 93
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
SH+TL L DA IL N WP++ P PSYG GRE G S I+G NL DV+ITG+
Sbjct: 94 ISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLIYGCNLTDVIITGN 153
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
NGTI+GQ WW ++ M S ++LISN+T +SPFWT+H C +VT
Sbjct: 154 NGTIDGQRSIWW---------------IESMNSKNVLISNVTFLNSPFWTMHHVYCSHVT 198
Query: 249 IRNAFI 254
++N I
Sbjct: 199 VQNVTI 204
>gi|326489917|dbj|BAJ94032.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 107/154 (69%), Gaps = 7/154 (4%)
Query: 1 MVEILSLGRFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNA--VVGGFS 58
MVE S GR+ LH + P RR AFL+++KTL +W+A F VF+WQ + V G
Sbjct: 1 MVET-SGGRWRLHLHGP--RRSAAAFLAANKTLLAAVWVAGFTLVFLWQSASMFVAGAGG 57
Query: 59 FLRWGVA-SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
R + SRP PRLRP A+NLTDFGGVGDG T+NT AF+RAV I+ +GG QLNVP
Sbjct: 58 GPRPALPPSRPAPRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVP 117
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIE-NEKY 150
PGRWLT PFNLTSHMTLFLA+ AEIL I +E+Y
Sbjct: 118 PGRWLTGPFNLTSHMTLFLAEGAEILGITVSERY 151
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 134/251 (53%), Gaps = 49/251 (19%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
++TDFGGVGDG T NT AF+RAV + +GG QLNVP G WL+ FNLTS+ TLFL
Sbjct: 72 MSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFL 131
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT---------- 186
A IL ++ WP++ PLPSYG GRE G R S IHG NL +VVIT
Sbjct: 132 ERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITVSVLRFSVMI 191
Query: 187 ----------GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSS--DILISNITLRDS 234
G G G + W R+ +L N+R ++ +S IL+S ++
Sbjct: 192 KEKMGQLMDRGKCGGSYGGTEHWC--IREAILLNSRTLIISSSLTSLCSILLSGQSI--- 246
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
FI+ DS ++ IEDCYI GDD +A+KSGWDQYG+A
Sbjct: 247 -----------------LFIA-----DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVA 284
Query: 295 RPSMNILIRNL 305
RPS NI+IR +
Sbjct: 285 RPSSNIVIRRI 295
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 128/241 (53%), Gaps = 19/241 (7%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
FN+TDFG V DG TL TEAF++AV K + GGG + VP G++LT P +L S+ L
Sbjct: 5 TVFNITDFGAVPDGKTLCTEAFKKAV---KKCEEAGGGTIYVPAGKFLTGPIHLVSNTNL 61
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A +L +N + +PL+ Y + I+G +++V ITGH GT++G
Sbjct: 62 HIDAGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITGH-GTLDG 115
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QG+ WW+ R+K L R + S +LI I + +SP WT++P C NV I I
Sbjct: 116 QGEPWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITI 175
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
DSC ++ I +CYISVGDD +AIKSG + Y P NI I N
Sbjct: 176 KNPADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGVEYS--KYRIPCENITITNCT 233
Query: 307 V 307
+
Sbjct: 234 M 234
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 104/165 (63%), Gaps = 33/165 (20%)
Query: 147 NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQK 206
+EKYWPLMP LPSYGYGRE GPRFGS IHGQNL+DVVIT +Y
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITAF-------------EYIIH 53
Query: 207 LLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCEDM 266
+LN L Q + + P +HP+ ++I ++ + DSC+D+
Sbjct: 54 VLNAL--ALYQTL-------------EVPV-DIHPFFYNILSI----LTLALVTDSCQDV 93
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
+IE+CYISVGDDAIAIKSGWDQYGIAYGRPS +ILIRN+ RS+V
Sbjct: 94 LIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLV 138
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 104/164 (63%), Gaps = 8/164 (4%)
Query: 154 MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRG 213
M PLPSYG G + R+ S I+GQNL DVVITG NG I+GQG WW LN +R
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCED 265
+++++ S +I+ISN+T +SP W++HP C N+ I+ + F DS E
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I++C IS G DAI +KSGWD+YG+AYG+P+ N+ IR + ++S
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQS 164
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R LTDFGGVGDGVT NT+AF+RA+ +S L GG QL VPPG+WLT FN
Sbjct: 45 PAINCRQHTAVLTDFGGVGDGVTSNTQAFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFN 104
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
LTSH TLF+ DA ILA ++E WP + LPSYG GR+ G R+ S I+G NL DVVITG
Sbjct: 105 LTSHFTLFVHKDATILASQDESEWPQVAILPSYGVGRDAPGGRYSSLIYGTNLTDVVITG 164
Query: 188 HNGTINGQGQAWWKKYRQKLL 208
+NG + Q Q YR +++
Sbjct: 165 NNGCKSSQLQVQL-DYRDEVV 184
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 87/110 (79%), Gaps = 9/110 (8%)
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF--------D 261
TR PL+Q+MWS DI+++NITL++SPFW HPYDC N+T+ N I + I D
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 262 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
SC+D++IE+CYISVGDDAIA+KSGWDQYGIAYGRPS NI+IRN++ RS+V
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLV 110
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 83/116 (71%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP ++ DFGGVGDG TLNT AF++AVY I ++GG L+VP G WL FNLTSHM
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
TLFLA A + A ++ + WPL+ PLPSYG GRE GPR+ SFIHG L+DVVITG
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGE 161
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 82/114 (71%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP ++ DFGGVGDG TLNT AF++AVY I ++GG L+VP G WL FNLTSHM
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
TLFLA A + A ++ + WPL+ PLPSYG GRE GPR+ SFIHG L+DVVIT
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVIT 159
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 97/145 (66%), Gaps = 8/145 (5%)
Query: 173 SFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLR 232
S IHG L+DVVITG NGTI+GQG AWW +++ L TR L+++M SSD+++SN+ +
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 233 DSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKS 284
DSPFW +HP C NV IRN + DS ++ IEDCYIS GDD IAIKS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 285 GWDQYGIAYGRPSMNILIRNLVVRS 309
GWD+YG+AYGRPS +I IR + S
Sbjct: 122 GWDEYGMAYGRPSSHITIRRITGSS 146
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 133/270 (49%), Gaps = 44/270 (16%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A N+ DFG D L T A + A I+K + GGG + PPG +LT P +L S++TLF
Sbjct: 22 ALNVLDFGAKNDSSALATTAIKEA---IAKASQAGGGTIYFPPGTYLTGPIHLKSNITLF 78
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ AE+ +N ++ +P +PS G F FI+ +++ ITG GT+NG
Sbjct: 79 IEAGAELCFSDNFDHY--LPMVPSRWEGT--MVTNFSPFIYAYEAENIRITGR-GTLNGN 133
Query: 196 GQAWW---------------KKYRQKLLNNT--------------RGPLVQIMWSSDILI 226
G+ WW +K KL N R P +Q M+ ++ I
Sbjct: 134 GKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQPMYCKNVRI 193
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDA 279
IT+++SPFWT++P C NVTI I+ +SC ++ I +C+ISVGDD
Sbjct: 194 DGITIKNSPFWTVNPEFCDNVTIDGVTINNPPSPNTDGINPESCSNVHISNCHISVGDDC 253
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I IKSG D+ G RP+ N I N + S
Sbjct: 254 ITIKSGKDRSGRKEARPAENYTITNCTMLS 283
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 83/118 (70%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R +T++G VGDG TLNT AF RAV +++ GG L VPPG+WLT PFNLT
Sbjct: 38 PGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPFNLT 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S TL+L + AEILA ++ K+WPL+ PLPSYG GR+ GPR+ +FI G NL DV+ITG
Sbjct: 98 SCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITG 155
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 134/272 (49%), Gaps = 50/272 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+ DFGG GDG N+ AF A IS+ GGG+L VP G W + P + S TL L +
Sbjct: 6 IDDFGGKGDGKFNNSNAFALAFAEISR---NGGGKLTVPKGVWASGPIEIPSDTTLELEE 62
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
+EI I + L P+ + G E + + K+V ITG GT+NG G+
Sbjct: 63 GSEISFIPDPN---LYTPVFTRWEGVECFA--MHPLVLSSHTKNVRITGK-GTLNGNGET 116
Query: 199 WW-----KKYR---------QKLLNNT-------------------RGPLVQIMWSSDIL 225
WW KK R +K+L R L++I ++ ++
Sbjct: 117 WWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAENVS 176
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGD 277
+ I ++DSPFWT+HP KN+T+R I DSCE++VIEDC++SVGD
Sbjct: 177 VEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGD 236
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D I IKSG GI +P++N+ IRN VR+
Sbjct: 237 DGICIKSGSGPDGIRCAKPTVNVEIRNCTVRN 268
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%), Gaps = 10/143 (6%)
Query: 171 FGSFIHGQNLKD--VVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISN 228
F + ++ +NL VV +G NGTI+GQG+ WW+ + + LN+TRG LV+++ S +ILISN
Sbjct: 22 FENVLNHENLLSFYVVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISN 81
Query: 229 ITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLFDSCEDMVIEDCYISVGDDAI 280
+T ++SPFWT+HP C NV I+ NA + DS ++ IEDCYI GDD +
Sbjct: 82 LTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLV 141
Query: 281 AIKSGWDQYGIAYGRPSMNILIR 303
A+KSGWDQYGI RPS NI+IR
Sbjct: 142 AVKSGWDQYGINLARPSSNIVIR 164
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 133/265 (50%), Gaps = 50/265 (18%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ FG +GDG + +T A QRA+ A+ K GG L VP G + TAP L S MTL+LA
Sbjct: 133 NVKQFGAIGDGKSDDTRALQRAIDAVPK-----GGTLYVPAGTYYTAPLQLKSDMTLYLA 187
Query: 138 DDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A +L N + Y P+ S G E + R+ S I G N+++V ITG G I+G G
Sbjct: 188 KGATLLGSSNIDAYKPIW----SRWEGTEMY--RYMSLITGDNVRNVTITGE-GVIDGNG 240
Query: 197 QA------------WW-KKYRQKL----------------LNNTRGPLVQIMWSSDILIS 227
+ WW K+Y++ L L R L++ + S +ILI
Sbjct: 241 ETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQGLPYARPSLIEFLHSQNILIQ 300
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFD--------SCEDMVIEDCYISVGDDA 279
+T+++SP WT+HP C +VT+ + I D S M I D SVGDD
Sbjct: 301 GVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTFSVGDDD 360
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRN 304
IAIKSG D G G PS NI++RN
Sbjct: 361 IAIKSGKDAEGRRIGIPSQNIVVRN 385
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 80/102 (78%), Gaps = 9/102 (8%)
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF--------DSCEDMVIE 269
MWS DI+++NITL++SPFW HPYDC N+T+ N I + I DSC+D++IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
+CYISVGDDAIA+KSGWDQYGIAYGRPS NI+IRN++ RS+V
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLV 102
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 126/239 (52%), Gaps = 19/239 (7%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG VG+G +TEAF++A+ A ++GGG + VP G +LT P +L S++TL++
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAIEA---SWEQGGGTVYVPAGVYLTGPIHLKSNITLYI 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + +PL+ Y + I+ +N +++ + G GTI+GQG
Sbjct: 60 ESGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVGF-GTIDGQG 113
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
+ WWK +R K L R V ++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 114 EMWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQN 173
Query: 257 IQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SCE + I +CYI VGDD + +KSG + + P NI I N ++
Sbjct: 174 PYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIM 230
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 129/255 (50%), Gaps = 28/255 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+ N+ G VGDG+T+NTE Q A+ +++ + L PPGRWLT P L S++ +
Sbjct: 192 SCVNVALAGAVGDGMTVNTETIQNALDSLTMKAQGRTQTLAFPPGRWLTGPLELKSNVKI 251
Query: 135 FLADDAEIL-AIENEKYWPL-----MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
L L A+++ WP+ P LPS + P F +FIH N ++ I+G
Sbjct: 252 VLDGPRSFLEAVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHAYNQTNIEISG- 305
Query: 189 NGTINGQGQAWW-----KKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPY 242
GTING G WW +KY + P LV ++ SD+ I NI L +SP +T+ P
Sbjct: 306 GGTINGHGDFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENIVLTNSPHFTVRPQ 365
Query: 243 DCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGD--DAIAIKSGWDQYGIA 292
C V++ IS +FDS + + D +I+ GD DA+AIKSG D +G
Sbjct: 366 YCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRK 425
Query: 293 YGRPSMNILIRNLVV 307
PS NI + ++ +
Sbjct: 426 ANVPSKNIRVEHVTI 440
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 19/240 (7%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ FG DG T +T A AI GGG + +P GR+LT P L SH+ L L
Sbjct: 8 FDIRTFGAQPDGETPSTAAI---TAAIETCAAAGGGVVYIPAGRFLTGPLRLKSHVRLHL 64
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A +L ++ +P+ L + G+E + I+G++L+ V ITG GTI+G+G
Sbjct: 65 EAGAHLLFSQDPADYPV---LETRWEGKEVL--TYAHQIYGEDLEGVAITGR-GTIDGRG 118
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
+ WW+ +R K + R L+ DILI +TL +SP WT++P C+ VTI I
Sbjct: 119 ETWWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIIN 178
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DS ++ I +CYI VGDD IAIK+G + Y P NI+I N ++R
Sbjct: 179 PPDSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMR 236
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 91/125 (72%), Gaps = 8/125 (6%)
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
NGTI+GQG+ WW+ + + LN+TRG L++++ S+++LISN+TLR+SPFWT+HP C+NV
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 249 IR--------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
I+ NA + DS ++ IEDCYI GDD +A+KSGWDQYGI+ G+PS NI
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 301 LIRNL 305
+I+ +
Sbjct: 126 IIQRV 130
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 24/243 (9%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF + DG++L+T+AF+ A+ + +GGG + PPG +LT P L S++ +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVAPPGTYLTGPIRLISNLVFEI 62
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A +L ++ + +P++ G + + P I+G+NL +V++TG +GT++GQG
Sbjct: 63 QAGATLLFTDDVEQFPIVDSRLE-GVKSKAYMP----CIYGKNLTNVILTG-SGTLDGQG 116
Query: 197 QAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
WWK +R+ + L R L+ +SS I IS++ L SP WT+HP +C +VTI+N I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQN--I 174
Query: 255 SKIQLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
S + D SC+++ I +C I VGDD IAIKSG +Q + NI I N
Sbjct: 175 SILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISN 233
Query: 305 LVV 307
+
Sbjct: 234 CTM 236
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 19/238 (7%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ +TEAF+RA+ A K GGG + VP G + T P +L S+MTL++
Sbjct: 4 NVVEFGAKGNGIDKDTEAFKRAIEACEK---HGGGTIFVPAGIYHTGPIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ A + ++ + +PL+ Y + I+ +N ++V + G GTI+GQG+
Sbjct: 61 NGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGE 114
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 115 KWWRLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNP 174
Query: 258 QLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 175 YDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIM 230
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 136/243 (55%), Gaps = 24/243 (9%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF + DG++L+T+AF+ A+ + +GGG + VPPG +LT P L S++ +
Sbjct: 6 ISLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVVPPGTYLTGPIRLISNLVFEI 62
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A +L ++ + +P + S G + + I+G+NL +V++TG +GT++GQG
Sbjct: 63 QAGATLLFTDDVEQFPT---VDSRWEGVKSKA--YMPCIYGKNLTNVILTG-SGTLDGQG 116
Query: 197 QAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
WWK +R+ + L R L+ +SS I IS++ L SP WT+HP +C +VTI+N I
Sbjct: 117 TNWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQN--I 174
Query: 255 SKIQLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
S + D SC+++ I +C I VGDD IAIKSG +Q + NI I N
Sbjct: 175 SILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISN 233
Query: 305 LVV 307
+
Sbjct: 234 CTM 236
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 122/241 (50%), Gaps = 19/241 (7%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A +N+ FG VGDG NT A +RAV A S+ GGG + VP G ++T L S+M L
Sbjct: 6 AVYNIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTVYVPAGVFVTGAIELKSNMHL 62
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L +E+L + + +P++ G R+ + S I+ + K++ ITG GT+NG
Sbjct: 63 HLEAGSELLFSNDREDYPVISSRWE-GASRD----VYMSCIYACHAKNIAITGF-GTLNG 116
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QG WWK +++ L R LV + + + + DSP WT+HP DC NVTI I
Sbjct: 117 QGAYWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSI 176
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
+SC ++ I DC I VGDD IAIKSG + P NI I N
Sbjct: 177 VNPANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCT 234
Query: 307 V 307
+
Sbjct: 235 M 235
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 129/240 (53%), Gaps = 23/240 (9%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ +TEAF++A I + K+GGG + VP G + T P +L S+MTL++
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKA---IEECEKQGGGTIFVPAGIYHTGPIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ A + ++ + +PL+ Y + I+ +N ++V + G GTI+GQG+
Sbjct: 61 NGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGE 114
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQ-- 172
Query: 258 QLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+D SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 173 NPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIM 230
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 47/295 (15%)
Query: 51 NAVVGGFSFLRWGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISK 105
+ V G + W + R+RP F ++T +G VGDGVT NT AF+ A+ A +
Sbjct: 34 DTTVAGLAQDPWERVPAILARIRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDAIRACHR 93
Query: 106 LGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGRE 165
GGG++ VP GR+LT L S + L + + +L + + + +P + + G E
Sbjct: 94 ---AGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTDPRDY--LPMVFTRWEGTE 148
Query: 166 HHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW-WKKYR-------------------- 204
+ SFI+ + +D+ ITG GT++GQG A WK +R
Sbjct: 149 CWN--YSSFIYARGQQDLAITGR-GTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEG 205
Query: 205 ----QKLLNNT---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISK 256
Q+L + R ++Q +IL+ +IT+ + P WT+HP C+NVT+RN I +
Sbjct: 206 VPVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGR 265
Query: 257 IQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I D + DM+I C DD+IA+KSG D+ G G PS NI+IR+ V
Sbjct: 266 INNSDGVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV 320
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 37/264 (14%)
Query: 65 ASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
A+ P ++ PAA NL + G G+ T AF A I L +GGG L VP GRWLT
Sbjct: 7 AALPPLQIPPAATNLLEHGAQEGGIQSCTTAFANA---IDTLAAQGGGTLTVPAGRWLTG 63
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
P L SH+ L L A + + + ++ PP+ ++ G F ++ ++ +
Sbjct: 64 PICLRSHIRLHLETGAHV--VFSREHADYQPPVLAHRAGCWVM--NFHPLLYARDATHIA 119
Query: 185 ITGHNGTINGQGQAWWKKYRQK-----------------------LLNNTRGPLVQIMWS 221
ITG GT +GQG AWW+ + + + + R +++ +
Sbjct: 120 ITGR-GTFDGQGDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINC 178
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISV 275
D+LI N+TLRDSP + +HP C+NVT+R I + + C +++IEDC +
Sbjct: 179 RDVLIENVTLRDSPAYLVHPVGCENVTLRGLSILGNGPNNDGIDPEYCRNVLIEDCLVDT 238
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMN 299
GDD I +KSG DQ G A RP+ N
Sbjct: 239 GDDCICLKSGRDQDGWAENRPTEN 262
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 47/295 (15%)
Query: 51 NAVVGGFSFLRWGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISK 105
+ V G + W + R+RP F ++T +G VGDGVT NT AF+ A+ A +
Sbjct: 19 DTTVAGLAQDPWERVPAILARIRPPTFPNRRFDITRYGAVGDGVTKNTRAFRDAIRACHR 78
Query: 106 LGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGRE 165
GGG++ VP GR+LT L S + L + + +L + + + +P + + G E
Sbjct: 79 ---AGGGRVVVPRGRFLTGAIQLRSQVELHVREGGTVLFSTDPRDY--LPMVFTRWEGTE 133
Query: 166 HHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW-WKKYR-------------------- 204
+ SFI+ + +D+ ITG GT++GQG A WK +R
Sbjct: 134 CWN--YSSFIYARGQQDLAITGR-GTLDGQGMAGPWKSWRDPGGNALVDQAELRRMGTEG 190
Query: 205 ----QKLLNNT---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISK 256
Q+L + R ++Q +IL+ +IT+ + P WT+HP C+NVT+RN I +
Sbjct: 191 VPVDQRLFGDGHHLRPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGR 250
Query: 257 IQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I D + DM+I C DD+IA+KSG D+ G G PS NI+IR+ V
Sbjct: 251 INNSDGVDPECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV 305
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 45/279 (16%)
Query: 68 PIPRLRPAA-FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P+P + P ++ D G G LNT A A+ A ++ +GGG + VPPG WLT
Sbjct: 10 PVPPVIPDRRVDIRDHGARPGGALLNTRAIAEAIQACAR---QGGGHVVVPPGIWLTGAI 66
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+ S + L L AE+ +N + +P + S G + + F++ +D+ IT
Sbjct: 67 HFRSRIDLHLEAGAELRFSQNPDDY--LPAVLSQRGGVMIYN--YSPFLYAHRCEDISIT 122
Query: 187 GHNGTINGQGQAWWK-KYRQKLLNNTRGP-------------------------LVQIMW 220
G G +NGQGQ+WW K+ Q +++ +GP Q +
Sbjct: 123 G-AGLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIE 181
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF---------DSCEDMVIED 270
+LI +T RDSP WTL P C ++ IR++ I + LF D+C +++IE
Sbjct: 182 CKRVLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEH 241
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C + GDDAI IK+G D+ G PS NILIR+ +RS
Sbjct: 242 CVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIRS 280
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 122/241 (50%), Gaps = 19/241 (7%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A +N+ FG VGDG NT A +RAV A S+ GGG + VP G ++T + S+M L
Sbjct: 7 AVYNIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTIYVPAGVFVTGAIEMKSNMHL 63
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L +E+L + +P++ G R+ + S I+ + +++ ITG GT+NG
Sbjct: 64 HLEAGSELLFSNDRADYPVISSRWE-GASRD----VYMSCIYACHAENIAITGF-GTLNG 117
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QG WWK +++ L R LV + I + + DSP WT+HP DC NVTI I
Sbjct: 118 QGAYWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSI 177
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
+SC ++ I DC I VGDD IAIK+G + A P NI I N
Sbjct: 178 VNPANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCT 235
Query: 307 V 307
+
Sbjct: 236 M 236
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 8/119 (6%)
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G WW+++R K L+ TR LV++M S+ ++ISN+T +SPFWT+HP C +V ++N I
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 256 KIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
DS +D+ IEDCYIS GDD IAIKSGWD+YGI+YGRPS NI+IR L+
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLI 119
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 23/240 (9%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ +TEAF++A I + K+GGG + VP G + +L S+MTL++
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKA---IEECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + ++E+ +PL+ Y + I+ +N ++V + G GTI+GQG+
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGE 114
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQ-- 172
Query: 258 QLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+D SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 173 NPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIM 230
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 19/239 (7%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ DFG G+GV +TEAF++A+ K GGG + VP G + +L S+MTL++
Sbjct: 3 YNVCDFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHVGALHLKSNMTLYI 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++E+ +PL+ Y + I+ ++ ++V + G GTI+GQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQG 113
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
+ WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQN 173
Query: 257 IQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIM 230
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 23/240 (9%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ +TEAF++A I + K+GGG + VP G + +L S+MTL++
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKA---IEECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + ++E+ +PL+ Y + I+ +N ++V + G GTI+GQG+
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGE 114
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQ-- 172
Query: 258 QLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+D SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 173 NPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIM 230
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 51/273 (18%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+T+FG GD T NTE+ A I + GGG L +P G +LT P +L S++T+++
Sbjct: 4 NITEFGAKGDSNTDNTESISSA---IKRCADSGGGTLYIPAGTYLTGPISLISNLTIYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A+++ I++ + PP+ + G E +G F ++G L +V I G +G I+GQG+
Sbjct: 61 SGAKLVFIDD---FSAYPPVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQGE 114
Query: 198 AWW---------KKYRQ------KLLNNT-----------------RGPLVQIMWSSDIL 225
AWW ++Y LN + R PL+Q+ +
Sbjct: 115 AWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSVT 174
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVG 276
+ ITL +SPFW H C NVTI N + L DSC ++ + +C+ VG
Sbjct: 175 LDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDL-DSCSNVRVSNCHFDVG 233
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DD +A KSG ++ G RP+ N+ + N +++
Sbjct: 234 DDCLAFKSGINEDGRRVARPTENVAVTNCTMKN 266
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 124/273 (45%), Gaps = 48/273 (17%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
NL +FG DG+ N AF AV S L + GGG L VP G W T P L + MTL
Sbjct: 2 CELNLKNFGAKADGIYNNAAAFAEAV---SVLHEAGGGTLTVPAGIWKTGPIRLCAKMTL 58
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
LA+ A + I + + L PP+ + G E + + ++ + V +TG G I+G
Sbjct: 59 HLAEGAVLRFIPDPE---LYPPVYTRWEGVECYA--MQACLYCADSDSVTVTGK-GVIDG 112
Query: 195 QGQAWWKKYRQKL-------------------------------LNNTRGPLVQIMWSSD 223
G WW QK + R LVQ ++
Sbjct: 113 SGDTWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTN 172
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISV 275
+ + +TL +SPFWT+HP C N+ +R I + DSC ++ I DC +SV
Sbjct: 173 VRLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSV 232
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
GDD IA+KSG + GI RP+ N+ +R VR
Sbjct: 233 GDDGIALKSGSGEDGIRVNRPTRNVTVRGCTVR 265
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPF 236
G L DVVI G NGTI+GQG WW +RQ L TR LV+ M S I+ISN+ ++SPF
Sbjct: 8 GDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPF 67
Query: 237 WTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
W + P C NV IR I + DS ++ IED +IS GDD +A+KSGWD+
Sbjct: 68 WNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDE 127
Query: 289 YGIAYGRPSMNILIRNLVVRS 309
YGI YGRPS +I IR + S
Sbjct: 128 YGIGYGRPSSHITIRRVTGSS 148
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 138/306 (45%), Gaps = 69/306 (22%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
W ++ P + +F++TD+G VGDGVT NTEAF +A+ A S + GGG++ +P G W
Sbjct: 13 WTLSEVGQPSIPDRSFSVTDYGAVGDGVTDNTEAFHKAIAACS---QAGGGRVVIPAGVW 69
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
LT P +L S + L A +L + +P++ + R S + G+ L+
Sbjct: 70 LTGPLSLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLE 124
Query: 182 DVVITGHNGTINGQGQAW-----WK---KYRQKLLNN-----------------TRGP-- 214
V ITG G +G G AW WK K+ KL+ + GP
Sbjct: 125 HVAITG-AGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAK 183
Query: 215 -------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
L+ + +L+ T ++SP W LHP+ C++VT+
Sbjct: 184 VAQLKREGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTL 243
Query: 250 RNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
R + DSC ++EDC VGDDAI IKSG D+ G A G P +IL
Sbjct: 244 RGVTVRNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDIL 303
Query: 302 IRNLVV 307
IRN V
Sbjct: 304 IRNCRV 309
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 128/274 (46%), Gaps = 50/274 (18%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A +++T +G GDG+ NT A A+ A S GGG + VP G ++T P L SH+TL
Sbjct: 2 AIYDITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITL 58
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + + + PP+ + G E G + I+G LK V I G G I G
Sbjct: 59 QLEAGS---VLRFTPRFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEG 112
Query: 195 QGQAWWKKYR--------------------QKLLNNT-------------RGPLVQIMWS 221
QGQAWW YR ++L +T R PL+Q+M
Sbjct: 113 QGQAWWDAYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHC 172
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYI 273
++++ ITL++SPFW H C +V++R DSC ++ I DC+
Sbjct: 173 EEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHF 232
Query: 274 SVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
VGDD + +KSG D+ G GRP+ N+ + N +
Sbjct: 233 DVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTM 266
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 23/240 (9%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ TEAF++A I + K+GGG + VP G + +L S+MTL++
Sbjct: 4 NVREFGAKGNGIDKVTEAFKKA---IEECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + ++E+ +PL+ Y + I+ +N ++V + G GTI+GQG+
Sbjct: 61 SGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQGE 114
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 115 KWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQ-- 172
Query: 258 QLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+D SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 173 NPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIM 230
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 45/279 (16%)
Query: 68 PIPRLRPAA-FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P+P + P ++ D G G LNT A A+ A ++ +GGG++ VP G WLT
Sbjct: 10 PVPPVIPDRRVDIRDHGAHPGGALLNTRAIADAIQACAR---QGGGRVVVPSGIWLTGAI 66
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+ S + L L AE+ +N + +PP+ S G + + F++ +D+ IT
Sbjct: 67 HFRSRIDLHLEAGAELRFSQNPDDY--LPPVLSQRGGVMIYN--YSPFLYAHRCEDISIT 122
Query: 187 GHNGTINGQGQAWWK-KYRQKLLNNTRGP-------------------------LVQIMW 220
G G +NGQGQ+WW K+ Q +++ +GP Q +
Sbjct: 123 G-AGLLNGQGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAGVRPVFCQPIE 181
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF---------DSCEDMVIED 270
+LI +T RDSP WTL P C ++T+R++ I + F D+C +++IE
Sbjct: 182 CKRVLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEH 241
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C + GDDAI IK+G D+ G P NILIR+ +RS
Sbjct: 242 CVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIRS 280
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 19/239 (7%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ +FG G+GV +TEAF++A+ K GGG + VP G + +L S+MTL++
Sbjct: 3 YNVCNFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHIGALHLKSNMTLYI 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++E+ +PL+ Y + I+ ++ ++V + G GTI+GQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVGF-GTIDGQG 113
Query: 197 QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
+ WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQN 173
Query: 257 IQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIM 230
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 151/337 (44%), Gaps = 75/337 (22%)
Query: 37 LWLAAFASVF---IWQRNAVVGG--FSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTL 91
+ +AAFA + + +NA +S L + + +P + ++T+FG V DG+TL
Sbjct: 14 VCIAAFALGYTNSVTAKNATEADNIYSELPFQMNKVQLPVFPDYSRSITEFGAVADGITL 73
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
NTEAF +A+ A+++ KGGG++ VP G WLT P L S++ L+L ++A +L + +
Sbjct: 74 NTEAFDKAIKAVAE---KGGGKVIVPAGLWLTGPIVLQSNINLYLEENALVLFTADHTQY 130
Query: 152 PLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------ 199
P+ + + G E R S I N +++ ITG G ++G G W
Sbjct: 131 PI---VKTSFEGLETR--RCQSPISALNAENLAITGK-GVMDGNGDTWRPVKKGKMTANQ 184
Query: 200 WKKYRQ-------------------------KLLNNTRGPLVQIMWSS------------ 222
WKK K N G W+S
Sbjct: 185 WKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTDEEWNSIRDWLRPVLLSF 244
Query: 223 ----DILISNITLRDSPFWTLHPYDCKNVTIRNAFISK--------IQLFDSCEDMVIED 270
+L+ +T ++SP W LHP C+++TI N +S +SC +I++
Sbjct: 245 IKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQNGDALDLESCNRALIQN 304
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
GDD I IKSG D+ G G P N++IRN VV
Sbjct: 305 SSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVV 341
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 133/302 (44%), Gaps = 73/302 (24%)
Query: 70 PRLRPA----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
P RP +T FGGVGDG TLN+EAF +A+ A L KKGGG L +P G W T P
Sbjct: 44 PVQRPVFPDYKVTITQFGGVGDGTTLNSEAFAKAIEA---LEKKGGGTLVIPQGIWYTGP 100
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
L S++ ++L A IL ++ +P++ R P I + ++ I
Sbjct: 101 IVLKSNIHIYLQGGAIILFSDDFDLYPIVHTSFEGLDTRRCQSP-----ISAKGAVNIAI 155
Query: 186 TGHNGTINGQGQAW------------WKKYRQK--LLNNT-------------------- 211
TG GTI+G G AW WK QK +LN+
Sbjct: 156 TGK-GTIDGNGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMN 214
Query: 212 ------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
R L+ + +++L+ +T ++SP W LHP C+NVTI N
Sbjct: 215 VPRGLKTDEEWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLT 274
Query: 254 ISKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ +SC++ ++ +C VGDD I IKSG D G G P N+++ N
Sbjct: 275 VRNPWYSQNGDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNC 334
Query: 306 VV 307
VV
Sbjct: 335 VV 336
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 137/306 (44%), Gaps = 69/306 (22%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
W ++ P + +F++TD+G VGDGVT NTEAF +A+ A S + GGG++ +P G W
Sbjct: 13 WTLSEVRQPSIPDRSFSVTDYGAVGDGVTDNTEAFHKAIAACS---QAGGGRVVIPAGVW 69
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
LT P +L S + L A +L + +P++ + R S + G+ L+
Sbjct: 70 LTGPLSLASRLDLHAQAGALVLFSRRFEDYPMI-----FSQYEGQPSIRCQSPLDGEGLE 124
Query: 182 DVVITGHNGTINGQGQAW-----WK---KYRQKLLNN-----------------TRGP-- 214
V ITG G +G G AW WK K+ KL+ + GP
Sbjct: 125 HVAITG-AGVFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAK 183
Query: 215 -------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
L+ + +L+ T ++SP W LHP+ C++VT+
Sbjct: 184 VAQLKREGSTDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTL 243
Query: 250 RNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
R + DSC ++EDC VGDDAI IKSG D+ G G P +IL
Sbjct: 244 RGVTVRNPWYGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDIL 303
Query: 302 IRNLVV 307
IRN V
Sbjct: 304 IRNCRV 309
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 68/288 (23%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFGG+ DG+TLNT+AF +A+ A+S KGGG L VP G W T P S++ L L
Sbjct: 53 ITDFGGIPDGITLNTDAFAKAMDALS---NKGGGTLFVPSGVWYTGPIVFKSNINLHLEK 109
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A IL + +PL+ + R P I G+NL+++ ITG G+ING G+A
Sbjct: 110 GALILFSADFNLYPLVNTVFEGLDTRRCQSP-----ISGRNLENIAITGE-GSINGSGEA 163
Query: 199 W--WKKYR------QKLLNN------------TRGPL----------------------- 215
W KK + +K++N+ ++G L
Sbjct: 164 WRPLKKSKVTEIHWKKVINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAEWMEI 223
Query: 216 --------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------- 259
V + ++L+ + +SP W +HP C+NV + N +
Sbjct: 224 KDFLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLD 283
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + VGDDAI IKSG D+ G RP+ N+LI N V
Sbjct: 284 LESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKV 331
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 52/283 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + +N+ DFG GDGVT NTEAF+ AI K +GGG++ VP G +LT L
Sbjct: 49 PTFKNKDYNIADFGAKGDGVTKNTEAFR---LAIEKCHAEGGGRVVVPHGVFLTGAIYLK 105
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L D IL + +P++ + + SFI+ +++ ITG
Sbjct: 106 SNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITGK- 159
Query: 190 GTINGQG--QAWW-----KKY---------------------------RQKLLNN---TR 212
GT++G WW +KY +Q++ + R
Sbjct: 160 GTLDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLR 219
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI-RNAFISKIQLFD-----SCEDM 266
VQ +ILI +I + +SP W L+P C+NVTI R IS D +C+++
Sbjct: 220 PNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVISHGPNNDGCDPEACKNV 279
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+I+DCY GDD IAIKSG D+ G GRP+ N +I N +++
Sbjct: 280 LIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKD 322
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 52/283 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + +N+ DFG GDGVT NTEAF+ AI K +GGG++ VP G +LT L
Sbjct: 49 PTFKNKDYNIADFGAKGDGVTKNTEAFR---LAIEKCHAEGGGRVVVPNGVFLTGAIYLK 105
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L D IL + +P++ + + SFI+ +++ ITG
Sbjct: 106 SNVNLHLTDGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITGK- 159
Query: 190 GTINGQ--GQAWW-----KKY---------------------------RQKLLNN---TR 212
GT++G WW +KY +Q++ + R
Sbjct: 160 GTLDGNSDNDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLR 219
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI-RNAFISKIQLFD-----SCEDM 266
VQ +ILI +I + +SP W L+P C+NVTI R IS D +C+++
Sbjct: 220 PNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVISHGPNNDGCDPEACKNV 279
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+I+DCY GDD IAIKSG D+ G GRP+ N +I N +++
Sbjct: 280 LIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKD 322
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 49/275 (17%)
Query: 71 RLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
R+RP AF +TD+G VGDG T+NT AF+ + A + GGGQ+ VP GR+LT
Sbjct: 57 RIRPPAFPRRSFRITDYGAVGDGRTMNTAAFRATIAACHR---AGGGQVVVPEGRFLTGA 113
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
+L S + L + A I + + + +P + + G E + + FI+ +DV +
Sbjct: 114 IHLRSRVNLHVTAGATIAFSPDPRDF--LPVVLTRWEGTECY--NYSPFIYAYGARDVAV 169
Query: 186 TGHNGTINGQG-----QAWWKKY-----RQKLLNNT------------------RGPLVQ 217
TG GT++GQ ++W++ QKLL R +VQ
Sbjct: 170 TG-PGTLDGQARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQ 228
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS-------CEDMVIED 270
++L+S++T+ D P WT+HP NVT+R + L+++ C D++I
Sbjct: 229 FYRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTVDST-LYNTDGCDPECCSDVLITG 287
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
C + DD +A+KSG D+ G G PS NI++R+
Sbjct: 288 CRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDC 322
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 129/298 (43%), Gaps = 69/298 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R N+ FG DGV+LNT+A +A IS +KGGG + VP G WLT P L
Sbjct: 39 PTFRRDTTNIIAFGAKPDGVSLNTQAINKA---ISTCSQKGGGVVLVPAGIWLTGPIVLK 95
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A +L ++ + L+ G R S + G NL +V ITG
Sbjct: 96 SNVNLHLKKAATLLFTTDKNQYALVE-----GVYEGKRAARNQSPVSGTNLANVAITGQ- 149
Query: 190 GTINGQGQAW------------WKKY---------------------------RQKLLNN 210
G ++G G W WK+ R LL
Sbjct: 150 GILDGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAP 209
Query: 211 TRGP-------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
+ P LV + +L+ +T ++SP W LHP C+++T+RN
Sbjct: 210 GKTPQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNP 269
Query: 258 QL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ +SC++ +IE C + VGDDAI IKSG D+ G G P+ N +IRN V
Sbjct: 270 EYAHNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTV 327
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 42/260 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ D+G +G+ TL TEAFQ+A+ S +GGG++ VP G +++ P L S++ +
Sbjct: 10 FNVNDYGAIGNH-TLCTEAFQKAIDTASD---RGGGKVIVPAGDYVSGPLFLRSNIEFEV 65
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A I + P++ G + S G +LK+V ITG G I+GQG
Sbjct: 66 CSGATIYFSNDIANTPII-----NGSWEGIERKVYASLFTGHDLKNVTITGR-GRIDGQG 119
Query: 197 QAWWKKY------------RQKLLNNTRGP--------LVQIMWSSDILISNITLRDSPF 236
+AWW + R++ N G ++ + ++ I+++T+ +SP
Sbjct: 120 KAWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPS 179
Query: 237 WTLHPYDCKNVTIRNAFISKIQLF----------DSCEDMVIEDCYISVGDDAIAIKSGW 286
WT+HP C+NV I IS IQ + D C + I +CYI GDD I +KSG+
Sbjct: 180 WTVHPVYCRNVIIDG--ISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGY 237
Query: 287 DQYGIAYGRPSMNILIRNLV 306
+++G G P NI+I N
Sbjct: 238 NEHGRKKGIPCENIVISNCT 257
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 53/286 (18%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
V S P + ++N+ D+G V DG TLNT AF++A I + + GGG++ VP G++LT
Sbjct: 45 VKSIPQTKFSDKSYNIKDYGAVADGTTLNTGAFEKA---IKECAENGGGKVIVPNGKYLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+L S++ L L D+AEIL N K +P+ + + G E + ++ +N +V
Sbjct: 102 GAIHLESNVNLHLDDNAEILFSTNPKDYPI---VHTSFEGTEVM--NYSPLVYAKNKTNV 156
Query: 184 VITGHNGTINGQGQA--WW-----KKY--------------RQKLLNNT----------- 211
ITG GT+NGQ + WW K Y R+ L++
Sbjct: 157 AITGK-GTLNGQANSSNWWVWSGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVF 215
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSC- 263
R ++ + +LI +I + ++PFW LHP N+ I + S D C
Sbjct: 216 GEGRYLRPNFIEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNSHGPNNDGCD 275
Query: 264 ----EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
++++I++C + GDD IAIKSG D G PS NI+++N
Sbjct: 276 PEYSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNC 321
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 125/264 (47%), Gaps = 39/264 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT-APFNLTSHMTLF 135
F +TDFG G + AI + ++GGG++ +P GRW + P L SH+ L
Sbjct: 42 FRITDFGAEAGG---EADCRPAVAAAIDRCSREGGGRVVIPAGRWFSKGPVVLKSHVNLH 98
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A + +E + +P + + G E + + I+ ++ +TG G I+G+
Sbjct: 99 LEAGAVLFFSSDEADY--LPAVLTRWEGTEVYN--YSPLIYAWQATNIAVTGQ-GVIDGR 153
Query: 196 GQ---AWWK---KYRQKLLNNT------------------RGPLVQIMWSSDILISNITL 231
G A WK K QK L R +++ + +D+LI +T
Sbjct: 154 GSHNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTF 213
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISVGDDAIAIKSG 285
DSPFW +HP C+NVT+R + L +SC +++IEDC GDD IAIKSG
Sbjct: 214 VDSPFWVIHPLACENVTVRGVTVDSYNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKSG 273
Query: 286 WDQYGIAYGRPSMNILIRNLVVRS 309
D GRP+ N+LIRN RS
Sbjct: 274 RDNDAWRIGRPTENVLIRNCSFRS 297
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 61/280 (21%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG VGDG+T NTEAF++A+ A GGG++ VP G++LT L S++ L L
Sbjct: 68 FLITDFGAVGDGLTKNTEAFKKAIEACHN---NGGGRVVVPYGKFLTGGIYLKSNVNLHL 124
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
AD A I+ + +P++ + + SFI+ +++ +TG NG ++G
Sbjct: 125 ADSATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNA 178
Query: 197 QA----WW---KKY--RQKLLNNT---------------------------RGPLVQIMW 220
WW KKY R++L T R +Q
Sbjct: 179 NNDYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQ 238
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIE 269
++ I+++ L +SP W L+P C+NV I K+++ ++C+++ I
Sbjct: 239 CKNVWIADVKLINSPMWNLNPVLCENV-----LIEKVKVISHGPNNDGCDPEACKNVWIR 293
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DCY GDD IAIKSG D+ G GRP+ N +I N V++
Sbjct: 294 DCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKD 333
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 44/286 (15%)
Query: 62 WGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
W A + L P F +TDFG VGDG TL EAF++A+ S GGG++ V
Sbjct: 27 WDKADAIVQSLDPVTFPDKTYVITDFGAVGDGKTLCKEAFEKAITICSD---NGGGKITV 83
Query: 117 PPGRW-LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
P G + + P S++ + L A + NE + +P + + G E + I
Sbjct: 84 PAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNESDY--LPAVITRWEGTELF--NYSPLI 139
Query: 176 HGQNLKDVVITGHNGTINGQGQAWW------KKYRQKLLNNT------------------ 211
+ +++++ +TG GT+NG G + + Q++L
Sbjct: 140 YAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKL 198
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCED 265
R ++ +++ I +T+ DSPFW +HP C NV +RN + +SC +
Sbjct: 199 RPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNNVIVRNVTVDSHNYNNDGCDPESCRN 258
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
++IE C S GDDAIAIKSG D G+P+ N++IRN RS +
Sbjct: 259 VLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI 304
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 142/327 (43%), Gaps = 72/327 (22%)
Query: 42 FASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVY 101
S F Q +A +S+ V + P + FN+T++G DG++LNT+A +A
Sbjct: 13 LCSFFAVQVHAQQSNYSWDNLPVVAEPT--FKKDTFNITNYGAKPDGISLNTDAINKA-- 68
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
IS KKGGG + VP G WLT P L +++ L L +A + +N + L+ G
Sbjct: 69 -ISDCSKKGGGVVLVPNGYWLTGPIKLQNNVNLHLKKNALLQFSKNFDDYKLVE-----G 122
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKKYRQK--- 206
R S I G N+ +V ITG G I+G G AW WK K
Sbjct: 123 VYEGKPSARNESPIMGVNVSNVAITGQ-GIIDGNGDAWRMVRTSDLTEYEWKAKIAKGEG 181
Query: 207 -----------LLNNTRG---------------------------PLVQIMWSSDILISN 228
N RG L+ + ++L+
Sbjct: 182 ILSEDKKRWYPSEKNKRGHDQNISFWLGPGVKLSDFEPVKDFLRPNLIVLNNCKNVLLEG 241
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAI 280
+T ++SP W +HP C+N+T+R FI +SC+++++E C VGDDAI
Sbjct: 242 VTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIESCKNVLVEHCIFDVGDDAI 301
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVV 307
IKSG D+ G G + N++IRN V
Sbjct: 302 CIKSGKDEEGRKRGIATENVIIRNNTV 328
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 54/275 (19%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ +G D L T+A ++A+ A SK GGG + P G++LT +L S++T+F+
Sbjct: 41 YNVLKYGARNDSSKLATQAIKKAIDAASK---AGGGTVYFPAGKYLTGAIHLKSNITIFI 97
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTI 192
AE+ +N + Y P++ + G SF + +++ ITG G I
Sbjct: 98 DAGAELHFSDNFDDYLPMVK--------SRYEGVDVTSFSPLFYAYKAENIAITGR-GII 148
Query: 193 NGQGQAWWK--------------KY------RQKLLNNT---------RGPLVQIMWSSD 223
+G G+ WW +Y R+ LL + R P +Q M+ +
Sbjct: 149 DGHGKKWWDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKN 208
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYIS 274
+ I IT+R+SPFWT++P C+NVTI I+ F +SC ++ I +C+IS
Sbjct: 209 VFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHIS 268
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
VGDD I IKSG D G P+ N I N + S
Sbjct: 269 VGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLS 303
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 27/240 (11%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG G+G+ +TEAF++A I + K+GGG + VP G + +L S+MTL++
Sbjct: 4 NVREFGAKGNGIDKDTEAFKKA---IEECEKQGGGTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + ++E+ + + G E + I+ +N ++V + G GTI+GQG+
Sbjct: 61 SGAVLKFSQDEEEY-------TRWEGEEMQ--VYSPLIYAENAENVAVVGF-GTIDGQGE 110
Query: 198 AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
WW+ +R K L R + +++ I I + +SP WT++P +C+NVT+ N I
Sbjct: 111 KWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQ-- 168
Query: 258 QLFD----------SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+D SC+ + I +CYI VGDD + +KSG + P NI I N ++
Sbjct: 169 NPYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIM 226
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 49/284 (17%)
Query: 62 WGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
W + + R+RP AF +TD+G VGDG T+NTEAF+ AI+ + GGG + V
Sbjct: 42 WSPVPKILARIRPPAFPRRTFTITDYGAVGDGQTMNTEAFR---AAIADCHRAGGGHVLV 98
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
P GR+LT +L S + L + + A I + + + +P + + G E + + FI+
Sbjct: 99 PEGRFLTGAIHLRSGVDLHVTEGATIAFSPDPRDF--LPVVFTRWEGTECY--NYSPFIY 154
Query: 177 GQNLKDVVITGHNGTINGQGQ--AWWKKYR--------QKLLNNT--------------- 211
++V +TG GT++GQ + W YR Q LL
Sbjct: 155 AYGERNVAVTG-PGTLDGQARLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDG 213
Query: 212 ---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------ 262
R +VQ ++L+S +T+ D P WT+HP NVT+R+ + L+++
Sbjct: 214 HYLRPKMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDST-LYNTDGCDPE 272
Query: 263 -CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
C D++I C + DD +A+KSG D+ G G PS NI++R+
Sbjct: 273 CCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDC 316
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 118/260 (45%), Gaps = 50/260 (19%)
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENE 148
T NT A A+ A S GGG + VP G ++T P L SH+TL L + +
Sbjct: 15 TTRNTPAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITLQLEAGS---VLRFT 68
Query: 149 KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR---- 204
+ PP+ + G E G + I+G LK V I G G I GQGQAWW YR
Sbjct: 69 PRFDAYPPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAYRVIRA 125
Query: 205 ----------------QKLLNNT-------------RGPLVQIMWSSDILISNITLRDSP 235
++L +T R PL+Q+M ++++ ITL++SP
Sbjct: 126 GGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSP 185
Query: 236 FWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW H C +V++R DSC ++ I DC+ VGDD + +KSG D
Sbjct: 186 FWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGID 245
Query: 288 QYGIAYGRPSMNILIRNLVV 307
+ G GRP+ N+ + N +
Sbjct: 246 EDGRRVGRPTENVAVTNCTM 265
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 136/299 (45%), Gaps = 69/299 (23%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +LT++GGVGDG+TLNTE F+ A I L KGGG L VP G WLT P L
Sbjct: 28 LPDIPGNRISLTEYGGVGDGITLNTECFREA---IEHLSAKGGGTLVVPTGIWLTGPIRL 84
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
SH+ L L +A ++ + +P + + R+ P I N D+ ITG
Sbjct: 85 KSHIELHLEKNALLIFTSDFWSYPSRSTFFTEVFYRQLQSP-----ISAYNESDIAITGE 139
Query: 189 NGTINGQGQAW------------WKKYRQK--LLNNT----------------------- 211
G I+G GQ W W+ ++K +LN+
Sbjct: 140 -GVIDGSGQDWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIH 198
Query: 212 ---------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN-----VTIRN 251
R L+ + +L+ +T ++SPFW LHP CK+ V +RN
Sbjct: 199 KYNTPDEWVRLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRN 258
Query: 252 AFISKIQ---LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ S+ +SC+++++ VGDDA+ IKSG ++ G G P+ N+++ + V
Sbjct: 259 PWNSQNGDGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTV 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
++ +F D+ G N + AI GGG++ +P G + TA +L S+
Sbjct: 542 IQTTSFRNQDYVISHYGAQKNQNITESLKAAIQACHTDGGGRVVIPKGEYYTAAIHLLSN 601
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ L L A + + + + + +P + S G + I+ +V ITG GT
Sbjct: 602 VNLHLEKGAVLRFLTSPEDY--LPVVVSRWEGVDCR--TLSPLIYANGQTNVAITGA-GT 656
Query: 192 INGQG--QAWW---------------KKYRQKLL-----------------NNTRGPLVQ 217
++GQ WW K + KLL + R P +Q
Sbjct: 657 LDGQASRDNWWSWKGRKSSSEQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKLRPPFIQ 716
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFD-----SCEDMVIEDC 271
+ +L+ +T+ SPFW LHP KNV +R F S D SCE+++IE C
Sbjct: 717 FYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDSHGPNNDGCDPESCENVLIESC 776
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ GDD +AIKSG + G + PS NI++RN ++R
Sbjct: 777 DFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRD 814
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 56/277 (20%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A +++T +G GDG+ NT A A+ A S GGG + VP G ++T P L SH+TL
Sbjct: 2 AIYDITSYGAQGDGLQDNTAAIAAAIEACSA---GGGGTVYVPAGDYVTGPIVLRSHITL 58
Query: 135 FLADDAEILAIENEKYWP---LMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
L + + ++ P P+ + G E G + I+G LK V I G G
Sbjct: 59 QLEAGSML------RFTPRFDAYAPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GV 109
Query: 192 INGQGQAWWKKYR--------------------QKLLNNT-------------RGPLVQI 218
I GQGQAWW YR ++L +T R PL+Q+
Sbjct: 110 IEGQGQAWWDAYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQL 169
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIED 270
M ++++ ITL++SPFW H C +V++R DSC ++ I D
Sbjct: 170 MHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISD 229
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
C+ VGDD + +KSG D G GRP+ N+ + N +
Sbjct: 230 CHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCTM 266
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 137/302 (45%), Gaps = 78/302 (25%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P A ++ +FG VGD VT N EAF RA+ +S+ KGGG++ VP G WLT P +
Sbjct: 52 PSFADYAVSIVEFGAVGDAVTPNGEAFTRAIEQVSE---KGGGRVIVPRGIWLTGPIQMK 108
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
S++ L L D A I N +PL+ L +Y R S IH NL+++ I
Sbjct: 109 SNINLHLEDGAVIRFSSNFDEYPLIKTSFEGLDTY---------RCISPIHAHNLENIAI 159
Query: 186 TGHNGTINGQGQAW------------WKKYRQ---------------------------- 205
TG NG I+G G AW WKK Q
Sbjct: 160 TG-NGVIDGNGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFN 218
Query: 206 -----------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
++ + R +V I IL+ T ++SP W +HP ++VTIRN I
Sbjct: 219 VPDFDNRDAFEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTI 278
Query: 255 SK---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ L +SC+++VI + VGDDAI KSG ++ G G P+ N++++N
Sbjct: 279 RNPWYSQNGDGLDL-ESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNN 337
Query: 306 VV 307
+V
Sbjct: 338 IV 339
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 130/303 (42%), Gaps = 73/303 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+PR+ +F NL+DFG VGDG L TEAF RA+ A+S+ KGGG+L VP G W T
Sbjct: 37 MPRVEAPSFPDNEVNLSDFGAVGDGTQLCTEAFARAIDALSQ---KGGGRLTVPAGVWFT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L + A IL + +PL+ + R P I G+NL +V
Sbjct: 94 GPIVLKSNINLHVEKGAVILFSPDIDLYPLVETVFEGLDTRRCQSP-----ISGRNLTNV 148
Query: 184 VITGHNGTINGQGQAWWKKYRQKL--------------------------------LNNT 211
ITG G I+G G W RQK+ ++N
Sbjct: 149 AITGQ-GAIDGNGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNM 207
Query: 212 RGP-------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
P +V ++ ++ + + ++SP W LHP C+NV I N
Sbjct: 208 NVPQNLKTEEEWQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENV 267
Query: 253 FISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ +SC + +I + VGDD I +KSG D+ G RP N+++
Sbjct: 268 EVRNPSYAQNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDG 327
Query: 305 LVV 307
V
Sbjct: 328 CTV 330
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +++FG VGDGVT+NT FQ A++ + KGG QL VP GRWLT FNLTSH+T+F
Sbjct: 32 SVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTIF 91
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
L DA I+ + WP++ PLPSYG G + G R S I+G N+ DVVIT
Sbjct: 92 LEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 254 ISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
++ + + DSC +M IED ISV DAI++KSGWD YGI GRP+ +I I + +++
Sbjct: 136 VTDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQA 191
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTDFG +GDG T NT+AF+ A+ ++ GG QL VPPG WLT FNLTSH TLF+
Sbjct: 853 LTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTGSFNLTSHFTLFIQQ 912
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
A ILA ++E +P++PPLPSYG RF S I+G NL DVVIT
Sbjct: 913 GATILASQDESEYPMIPPLPSYGEA------RFTSLIYGSNLTDVVIT 954
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 149/332 (44%), Gaps = 82/332 (24%)
Query: 41 AFASVFIWQRNAVVGGFSFLRWGVASRPIPR---LRPAAFNLTDFGGVGDGVTLNTEAFQ 97
A A +F++ A + S P+ + ++ ++ FG GDGV++NTE+
Sbjct: 14 ALACIFLFSAGAA------MAQQKTSMPVIKQVNIKADTTSIVSFGAKGDGVSMNTESIN 67
Query: 98 RAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPL 157
+A+ A+S+ KGGG + +P G WLT P L S++ L L DA + ++ + L+
Sbjct: 68 KAIAAVSQ---KGGGVVLIPGGLWLTGPIELKSNVNLHLKRDALLQFTDDFNQYKLVE-- 122
Query: 158 PSYGYGREHHGP--RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNN----- 210
G P R S I G +L+++ ITG +G I+G G AW R KL +
Sbjct: 123 -----GNWEGQPAWRNQSPISGTDLQNIAITG-SGIIDGNGGAWRMVKRDKLTESQWKKL 176
Query: 211 -TRGPLVQ---IMW-------------------------------------------SSD 223
T G LV MW
Sbjct: 177 TTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAAGQSAADLQSIKDFLRPNLLVLTNCKQ 236
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISK---IQLFD-----SCEDMVIEDCYISV 275
IL+ +T ++SP W LHP C+++T+RN + Q D SC++++IE V
Sbjct: 237 ILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGDGVDVESCKNVLIEGSTFDV 296
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
GDD I IKSG D+ G G+P+ N++IRN VV
Sbjct: 297 GDDGICIKSGRDEAGRKRGKPTENVIIRNNVV 328
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 136/307 (44%), Gaps = 71/307 (23%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
W + + + + +T FG V DG TLNT++ Q A+ A + KGGG + VPPG W
Sbjct: 23 WKLPEVAQTKFSGSVYPITKFGAVPDGYTLNTKSIQAAIDACTA---KGGGVVAVPPGLW 79
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
LT P L S++ L LA A +L +++ +PL + + G E R S I +N
Sbjct: 80 LTGPLTLKSNVNLNLAAGATLLFTKDKTQYPL---VKANWEGFEQM--RNQSPISAKNAV 134
Query: 182 DVVITGHNGTINGQGQAW------------WKK--------------------------- 202
++ ITG NG I+G G AW WK
Sbjct: 135 NIAITG-NGIIDGNGDAWRMVKKDKLTESQWKNLVASGGVLAEGGKTWMPSESYAKGNAM 193
Query: 203 -------------YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
+ Q + + R LV + +L+ +T ++SP W LHP KN+T+
Sbjct: 194 KDPGRLSPDKDAAFYQSVKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITV 253
Query: 250 RNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
RN F+ I L +SC +++IE+ VGDD + +KSG D G P+ ++
Sbjct: 254 RNVFVKNPWYAQNGDGIDL-ESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDV 312
Query: 301 LIRNLVV 307
+IR V
Sbjct: 313 IIRGCTV 319
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 146/309 (47%), Gaps = 84/309 (27%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+PR++ +F ++TDFG V DG+T +T AF++A I+ + KGGG++ VP G WLT
Sbjct: 61 MPRVQEPSFGNYSVSITDFGAVSDGLTKSTAAFEKA---IADVVAKGGGKVIVPRGMWLT 117
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQN 179
P L S++ L + D A +L ++ +PL+ L ++ R S I G++
Sbjct: 118 GPIVLKSNINLHVEDGALVLFSKDFDDYPLVKTSFEGLNTF---------RCQSPISGRD 168
Query: 180 LKDVVITGHNGTINGQGQAW------------WK---------------------KYRQK 206
L++V ITG G I+G G AW WK R
Sbjct: 169 LENVAITGK-GVIDGNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWYPTESSKRGA 227
Query: 207 LLNNTRGPL-------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+ N PL V ++ +L+ T ++SP W +HP C++V
Sbjct: 228 VTGNFNVPLDLTEKEQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDV 287
Query: 248 TIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
TIRN + + L +SC++ VI + VGDDAI IKSG DQ+G G P+
Sbjct: 288 TIRNLTVRNPWYSQNGDGLDL-ESCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTE 346
Query: 299 NILIRNLVV 307
N++++N VV
Sbjct: 347 NVIVKNNVV 355
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 44/286 (15%)
Query: 62 WGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
W A + L P F +TDFG VGDG TL E F++A+ S GGG++ V
Sbjct: 27 WDKADAIVQSLDPVTFPDKTYIITDFGAVGDGKTLCKEPFEKAITICSD---NGGGKITV 83
Query: 117 PPGRW-LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
P G + + P S++ + L A + NE + +P + + G E + I
Sbjct: 84 PAGTYYMNGPLVFKSNVNVHLEKGAILDFSTNESDY--LPAVITRWEGTELF--NYSPLI 139
Query: 176 HGQNLKDVVITGHNGTINGQGQAWW------KKYRQKLLNNT------------------ 211
+ +++++ +TG GT+NG G + + Q++L
Sbjct: 140 YAYHVQNIALTGE-GTVNGNGSKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGYKL 198
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCED 265
R ++ +++ I +T+ DSPFW +HP C NV +RN + +SC +
Sbjct: 199 RPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSNVIVRNVTVDSHNYNNDGCDPESCRN 258
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
++IE C S GDDAIAIKSG D G+P+ N++IRN RS +
Sbjct: 259 VLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI 304
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 141/331 (42%), Gaps = 68/331 (20%)
Query: 36 VLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEA 95
+L L F + I+ ++ + L + + IP +TDFGG+GDG+ LNT+A
Sbjct: 6 LLALTFFIAGGIYAKDRYDYLYDNLPFSMPKLAIPNFPDNKVKITDFGGIGDGIYLNTQA 65
Query: 96 FQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMP 155
F +A+ A+S KGGG L VP G WLT P S++ L L D A IL ++ +P++
Sbjct: 66 FSKAIDALSA---KGGGMLTVPAGIWLTGPIQFKSNINLHLEDRAIILFSPDKNLYPIVE 122
Query: 156 PLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKKY 203
R P I G+NL ++ ITG +G I+G GQ W WKK
Sbjct: 123 TSFEGLDTRRCQSP-----IWGKNLTNIAITG-SGAIDGNGQFWRPLKKQKVTESFWKKT 176
Query: 204 R---------------------------------------QKLLNNTRGPLVQIMWSSDI 224
Q + + R +V ++
Sbjct: 177 VSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEEWQSVRDFLRPVMVSFRECKNV 236
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVG 276
+ + ++SP W +HP C+NV I + +SC+++++ + VG
Sbjct: 237 YLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGDGLDLESCKNVIVVNSSFDVG 296
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD I +KSG ++ G G P N+++ N V
Sbjct: 297 DDGICLKSGKNEDGRKRGMPCENVIVDNCTV 327
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 133/303 (43%), Gaps = 73/303 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+PR+ F N+ DFG V DG TLNTEA +A I K+ +GGG++ +P G WLT
Sbjct: 1 MPRVVQPVFPDYEVNIKDFGAVADGKTLNTEAINKA---IQKVSARGGGKVIIPQGLWLT 57
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +++ IL +N +P+ + + G E R S I N +++
Sbjct: 58 GPIELQSNVNLYTEENSLILFSDNFNDYPI---IETSFEGLETR--RCQSPISAVNAENI 112
Query: 184 VITGHNGTINGQGQAW------------WKKYRQ-----------------------KLL 208
ITGH G +G G +W WK K
Sbjct: 113 AITGH-GVFDGAGDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEF 171
Query: 209 NNTRGPLVQIMWSS----------------DILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NN G + W+ ++L+ +T ++SP W LHP C+++TI
Sbjct: 172 NNPEGIETEEQWNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGV 231
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ +SC + ++ + GDDAI IKSG D+ G G P N++++N
Sbjct: 232 KVFNPWYSQNGDALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN 291
Query: 305 LVV 307
VV
Sbjct: 292 NVV 294
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 78/339 (23%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTL 91
T T+L ++ V + + F + IP+ + N+ DFG V G L
Sbjct: 11 TALTILAVSFSVPVLAQKASDTYKDIEFKMAKIKEPVIPK---NSVNIKDFGAVNGGYVL 67
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
NT+AF A+ A+SK KGGG++ +PPG WLT P L S++ L A I ++ +
Sbjct: 68 NTKAFADAIDAVSK---KGGGKVIIPPGIWLTGPIILKSNIELHAERGALIKFSTDKSLY 124
Query: 152 PLMPPLPSYGYGREHHGP---RFGSFIHGQNLKDVVITGHNGTINGQGQAW--------- 199
P++ G G R S I+G+NL+++ TG NG +G G+ W
Sbjct: 125 PII--------GTNFEGLNTWRCISPIYGKNLENIAFTG-NGVWDGSGEVWRQVKKSKLT 175
Query: 200 ---WKKY----------------RQKLLNNTRGP------------------------LV 216
WKK+ + +N ++G +V
Sbjct: 176 ESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLKTKEEFETIHDFLRPVMV 235
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYD-----CKNVTIRNAFISKIQ---LFDSCEDMVI 268
I S +L ++SP W +HP+ +NVT+RN + S+ + C+++++
Sbjct: 236 SIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVECCKNVLV 295
Query: 269 EDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
E+ VGDDAI IKSG D+ G+ G P NI++RN +V
Sbjct: 296 ENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIV 334
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 137/333 (41%), Gaps = 84/333 (25%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRP---IPRLRPAAFNLTDFGGVGDG 88
T F L LAA A F+ A P +P R ++ G V DG
Sbjct: 5 TGFATLCLAAIAQ--------------FVSASPADLPKVSVPTFRKDTIAISKLGAVADG 50
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENE 148
+TLNT A +A I + K GGG + VP G WLT P L S++ L LA A +
Sbjct: 51 LTLNTAAINKA---IDQCTKAGGGVVLVPRGLWLTGPVTLKSNVNLHLAKGALLQFTNRR 107
Query: 149 KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW--------- 199
+ +PL+ + P I G L+++ ITG G ++G G+AW
Sbjct: 108 EVYPLINTTWEGEEAIRNQAP-----ISGVGLENIAITGE-GILDGAGEAWRMVKKGKLT 161
Query: 200 ---WKK------------------------------------YRQKLLNNTRGPLVQIMW 220
WKK Y + + + R ++ +
Sbjct: 162 SDQWKKLVASGGVLNDKQDTWYPTAQSLKGASEPVKAGQPMTYYEGIKDFLRPNMLSLTR 221
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDC 271
IL+ +T ++SP W LHP C+++T+R + L +SC + +++DC
Sbjct: 222 CKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDL-ESCRNGLVDDC 280
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
VGDD I IKSG D+ G G P+ NI +RN
Sbjct: 281 TFDVGDDGICIKSGRDEQGRKRGVPTENITVRN 313
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 53/289 (18%)
Query: 60 LRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG 119
+ + + P + +N+ DFG V DG TLNT AF++A+ ++ GGG++ VP G
Sbjct: 41 MELTIKNLPKTNFQDKTYNINDFGAVADGKTLNTAAFEKAIQTCTE---NGGGKVLVPNG 97
Query: 120 RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQN 179
++LT +L +++ L L D AEIL N K +P+ + + G E + I+ +N
Sbjct: 98 KYLTGAIHLENNVNLHLEDKAEILFSLNPKDYPI---VHTSWEGTELM--NYSPLIYAKN 152
Query: 180 LKDVVITGHNGTINGQGQA--WW-----KKY--------------RQKLLNNT------- 211
+V ITG G +NGQ + WW K Y R+ L++
Sbjct: 153 KTNVAITGK-GILNGQADSTNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVE 211
Query: 212 ----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLF 260
R ++ + +L+ +IT+ +SPFW LHP N+ I + S
Sbjct: 212 QRIFGEGRYLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNSHGPNN 271
Query: 261 DSC-----EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
D C +++VI++C + GDD IAIK+G D G PS NI+++N
Sbjct: 272 DGCDPEYSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQN 320
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 148/323 (45%), Gaps = 59/323 (18%)
Query: 35 TVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRP-----AAFNLTDFGGVGDGV 89
+ ++ +AF V Q N + F+ W A + ++ P A F LTDF GDG+
Sbjct: 9 SFMYASAFCGVSACQTN-LPRAFADPVWEKAEQIRQKITPPSIPKAQFLLTDFDARGDGI 67
Query: 90 TLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK 149
NT AF+ A+ A K GGGQ+ VP G +LT L S++ L ++ A ++ +
Sbjct: 68 FDNTAAFKAAIDACR---KAGGGQIRVPDGHYLTGAIQLHSNIELNVSAGARLIFSTDPM 124
Query: 150 YWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWW------ 200
+P++ L Y G ++ P I+ ++ K+V ITG G ++GQ + WW
Sbjct: 125 DYPVV--LTRYEGVEVMNYSP----LIYARDAKNVAITGE-GVLDGQASNEHWWPWCGAE 177
Query: 201 -----------KKYRQKLLNNTR----------GP-------LVQIMWSSDILISNITLR 232
RQ L GP V+ ++L+ +I L+
Sbjct: 178 RFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCENVLVEDIHLK 237
Query: 233 DSPFWTLHPYDCKNVTIRNA-FISKIQLFDSC-----EDMVIEDCYISVGDDAIAIKSGW 286
DSPFW +HP +NV +R + D C + M+IE+CY GDD IAIKSG
Sbjct: 238 DSPFWNIHPVLSRNVIVRGVEVVGHGPNNDGCNPESVDHMLIENCYFDTGDDCIAIKSGR 297
Query: 287 DQYGIAYGRPSMNILIRNLVVRS 309
+ G PS NILIRN +++
Sbjct: 298 NADGRRVAVPSENILIRNCQMKA 320
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 51/282 (18%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
IP FNL +FGG +G + NT AF++A+ A SK GGG++ VP GR+ T +L
Sbjct: 45 IPTFPNKEFNLLEFGG-KEG-SDNTLAFKKAIAACSK---AGGGKVVVPAGRFETGAIHL 99
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L +++ A I + KY+ +P + + G E G + I+ ++ ITG
Sbjct: 100 ESNVNLHISEGATIAFFTDPKYY--LPAVFTRWEGMECMG--YSPLIYAYGKTNIAITGK 155
Query: 189 NGTINGQGQA--WW----------------KKYRQKLLNNT-----------------RG 213
GT++GQ WW K+ R +L R
Sbjct: 156 -GTLDGQADPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGHYLRP 214
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++LI +IT+ ++PFW LHP +NVT+R + + +SC+++V
Sbjct: 215 SFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRGVHLESLGPNSDGCDPESCKNVV 274
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IE+C+ + GDD IAIKSG + G P+ N++IRN + +
Sbjct: 275 IENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEA 316
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 44/294 (14%)
Query: 54 VGGFSFLRWGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGK 108
+ GF+ W ++ F N+ FG V + A A I+K
Sbjct: 21 IAGFTQTGWDYVKEIEKNIKAPTFANRNYNILHFGAQKGAVKDSRPAINTA---ITKCSD 77
Query: 109 KGGGQLNVPPGRW-LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
+GGGQ+ VPPG++ + P S++ L+L++ AE++ +EK + +P + + G E
Sbjct: 78 EGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEGAELIFSHDEKDY--LPAVLTRWEGTEVF 135
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWWK---KYRQKLL------------- 208
+ I+ ++++ ITG G +NGQG A WK K Q L+
Sbjct: 136 N--YSPLIYAYQVENIAITGK-GILNGQGSKNIANWKPEQKKDQALIRKMGREGAPVYNR 192
Query: 209 -----NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL---- 259
+ R ++ + +ILI + + D+ FW +HP C NVT+RN I
Sbjct: 193 LFGEKHKLRPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVSIDSFNANSDG 252
Query: 260 FD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
FD S + ++E+C+ GDD IAIKSG DQ G G+P+ NI++RN S+
Sbjct: 253 FDPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNSTFESLA 306
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ AF N+ DFG GDG+ LNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPAFPDYTVNIVDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVIIPEGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L ++ + +P++ R P I N +++
Sbjct: 102 GPIELLSNVNLYTEMNALVLFTDDFEAYPIIKTSFEGLDTRRCQSP-----ISAWNAENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL------------------------------------ 207
ITGH G +G G +W + KL
Sbjct: 157 AITGH-GVFDGSGDSWRPVKKGKLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATK 215
Query: 208 -LNNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
NN G L+ I+ S +L+ +T ++SP W LHP C+++TI
Sbjct: 216 DFNNPEGINTDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIH 275
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 276 NVKVFNPWYSQNGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIV 335
Query: 303 RNLVV 307
+N V
Sbjct: 336 KNNTV 340
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 129/257 (50%), Gaps = 26/257 (10%)
Query: 71 RLRPAAF--NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
R P +F ++ DFG GDG TL+T A Q A+ + + GG + PPG +L P L
Sbjct: 74 RTEPESFVVDVRDFGAKGDGKTLDTFAVQAAIMSCPE-----GGTVVFPPGTYLLTPVFL 128
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREH-------HGPRFGSFIHGQNLK 181
S++T+ + DA +L + +P++P L S G + F S + G ++
Sbjct: 129 KSNLTIEIQKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVE 188
Query: 182 DVVITGHNGTI--NGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+V I G G I N WW + K + R + + +ILI IT+R+SP WT+
Sbjct: 189 NVRIIGQ-GVIDANANFDDWWFNPKVKRIA-WRPRSIFLNRCKNILIEGITIRNSPSWTV 246
Query: 240 HPYDCKNVTI--------RNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
HP CK++ + +N+ + +SC +++I C ISVGDD +A+K+G +
Sbjct: 247 HPLFCKDLKLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQ 306
Query: 292 AYGRPSMNILIRNLVVR 308
+ PS NI IRN ++
Sbjct: 307 KFDVPSENIEIRNCLME 323
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 130/298 (43%), Gaps = 68/298 (22%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +TD+G VGDGV NT+AF +A+ A +K GGG L +PPG WLT P L
Sbjct: 13 LPVIPEHTVTITDYGAVGDGVYDNTQAFHQAIEACAK---AGGGTLVIPPGIWLTGPIKL 69
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L + A ++ K++ P L S GR+ R S + G+ L+DV ITG
Sbjct: 70 QSRIELHASAGAFVMF---SKFFEDYPILMSTYEGRQMF--RCQSPLDGEGLEDVAITG- 123
Query: 189 NGTINGQGQAWWKKYRQKLLNNT------------------------------------- 211
G +G G+AW R KL +
Sbjct: 124 GGIFDGSGEAWRPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTG 183
Query: 212 --------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--- 254
R L+ + IL+S T ++S W LHP+ + +TI+N +
Sbjct: 184 SEEPQDYEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNP 243
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DSC+ + +E+ VGDDAI +KSG ++ G G+PS I IRN V
Sbjct: 244 WYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTV 301
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LT+FG +GDG NT+AF+ A+ ++ L GG QL VPPG WLT FNLTSH TLF+
Sbjct: 852 LTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLTSHFTLFIQQ 911
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
A ILA ++E +P++PPLPSYG RF ++G NL DVVIT
Sbjct: 912 GATILASQDESEYPMIPPLPSYG------DARFTGLVYGSNLTDVVIT 953
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 49/277 (17%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+ R+RP AF +T +G VGDG +NTEAF+ A+ A + GGG + VP GR+LT
Sbjct: 5 LARIRPPAFPRRTFTITHYGAVGDGQKMNTEAFRAAIAACHR---AGGGHVLVPEGRFLT 61
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+L S + L + + A I + + + +P + + G E + + FI+ ++V
Sbjct: 62 GAIHLRSGVDLHVTEGATIAFSPDPRDF--LPVVFTRWEGTECY--NYSPFIYAYGERNV 117
Query: 184 VITGHNGTINGQGQ--AWWKKYR--------QKLLNNT------------------RGPL 215
+TG GT++GQ + W YR Q LL R +
Sbjct: 118 AVTG-PGTLDGQARLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKM 176
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS-------CEDMVI 268
VQ ++L+S +T+ D P WT+HP NVT+R+ + L+++ C D++I
Sbjct: 177 VQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITVDST-LYNTDGCDPECCSDVLI 235
Query: 269 EDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
C + DD +A+KSG D+ G G PS NI++R+
Sbjct: 236 TGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDC 272
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 79/301 (26%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
++ ++ FG GDG++LNT+A RA I++ +KGGG + +P G W+T P L S+
Sbjct: 55 IKADTISIVRFGAQGDGISLNTQAINRA---IAETSQKGGGVVLIPAGVWVTGPIELKSN 111
Query: 132 MTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
+ L + DA +L ++ + L+ P++ R S I G NL+++ ITG
Sbjct: 112 INLHIQRDAILLFTDDFDQYKLVEANWEGQPAW---------RNQSPISGSNLENIAITG 162
Query: 188 HNGTINGQGQAW------------WKKYRQK--LLNN----------------TRGP--- 214
G I+G G AW WKK + +LN T+ P
Sbjct: 163 -TGIIDGNGGAWRMVKKSKMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPSAV 221
Query: 215 -------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
L+ + IL+ +T ++SP W LHP C+++T+RN +
Sbjct: 222 VPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVR 281
Query: 256 K---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I + +SC+++++E+ VGDD I IKSG D+ G P+ N++IRN V
Sbjct: 282 NPWYAQNGDGIDI-ESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNV 340
Query: 307 V 307
V
Sbjct: 341 V 341
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 69/341 (20%)
Query: 27 LSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVG 86
+ +++ + + L +F+ F + + + + P + NL DFG V
Sbjct: 1 MKTNRKILLCIALTSFSLSFNTVSAQKYDTYKNIEFKMTEVQEPVIPNYNVNLKDFGAVN 60
Query: 87 DGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE 146
G LNT+AF A+ A+SK KGGG+L +PPG WLT P L S++ L A+ ++
Sbjct: 61 GGYVLNTKAFADAIDALSK---KGGGKLIIPPGIWLTGPIILKSNIELH-AERGALIKFS 116
Query: 147 NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------- 199
+K L P + + G R S I+G+NL+++ TG NG +G G+AW
Sbjct: 117 TDK--SLYPIIETSFEGLNTW--RCISPIYGKNLENIAFTG-NGVWDGSGEAWRQVKKSK 171
Query: 200 -----WKKY----------------RQKLLNNTRGP------------------------ 214
WKK+ ++ L +G
Sbjct: 172 LTDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKEDFEAIHDFLRPV 231
Query: 215 LVQIMWSSDILISNITLRDSPFWTLHP-----YDCKNVTIRNAFISKIQ---LFDSCEDM 266
LV I S ++ ++SP W LHP +NVT+RN + S+ +SC+++
Sbjct: 232 LVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNV 291
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+IE+ VGDDAI IKSG D+ G G P NI+++N +V
Sbjct: 292 IIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIV 332
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 46/270 (17%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+T +G D L T A ++A+ A SK G GG + P G++LT +L S++T+F+
Sbjct: 31 YNVTKYGAKNDSSKLATVAIKKAIDAASKAG---GGTVYFPAGKYLTGAIHLKSNITIFI 87
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
AE+ +N + Y P++ G + P F ++ +++ I G G I+G
Sbjct: 88 DAGAELHFSDNFDDYLPMVESRYE-GVDVKSFSPLFYAY----KAENISIIGR-GLIDGH 141
Query: 196 GQAWWK--------------KYRQKLLNNT---------------RGPLVQIMWSSDILI 226
G+ WW +Y LN R P +Q M+ ++LI
Sbjct: 142 GKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTMFCKNVLI 201
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDA 279
IT+R+SPFWT++P +NV I I+ +SC+++ I DC+ISVGDD
Sbjct: 202 DGITIRNSPFWTVNPEFSENVKIHAVTINNPHSPNTDGINPESCKNVHISDCHISVGDDC 261
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I IKSG D+ G P+ N +I N + S
Sbjct: 262 ITIKSGKDEPGRRMAIPAENYVITNCTMLS 291
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 37 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGVWLT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L N + +P+ + + G E R S I +N +++
Sbjct: 94 GPIELLSNVNLYTEQNALVLFTGNFEAYPI---IATSFEGLETR--RCQSPISARNAENI 148
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITGH GT +G G W WKK +Q++ T G
Sbjct: 149 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 207
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 208 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 267
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 268 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 326
Query: 302 IRNLVV 307
++N V
Sbjct: 327 VKNNTV 332
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ AF N+ DFG GDG+ LNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPAFPDYTVNIIDFGAKGDGIVLNTKAINDAIKAVNA---KGGGKVVIPGGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A IL ++ + +P++ R P I N +++
Sbjct: 102 GPIELLSNVNLYTEMNALILFTDDFEAYPIIETSFEGLNTRRCQSP-----ISAWNAENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL------------------------------------ 207
ITG NG +G G +W + KL
Sbjct: 157 AITG-NGVFDGSGDSWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATK 215
Query: 208 -LNNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
NN G L+ I+ S +L+ +T ++SP W LHP C+++TI
Sbjct: 216 DFNNPEGIETDEEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIH 275
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 276 NVKVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIV 335
Query: 303 RNLVV 307
+N V
Sbjct: 336 KNNTV 340
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 52/290 (17%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+ S +P F++ D+G VGDG T NT+A + A+ A + G GG++ +P G++LT
Sbjct: 36 IESITVPEFPDNDFSIMDYGAVGDGTTDNTQAIKDAIQACVEAG---GGKVVIPAGKFLT 92
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P +L S++ L L ++E++ ++++ + +P + + G E + I+ K++
Sbjct: 93 GPIHLKSNVNLHLEKNSEVIFTKDKQAY--LPVVRTSYEGVELM--NYSPLIYAYQQKNI 148
Query: 184 VITGHNGTINGQG--QAWW-----KKY----------------RQKLLNNTRGPLVQIMW 220
+TG +GT NGQ + WW ++Y R + +N P+ + ++
Sbjct: 149 AVTG-SGTFNGQAGKENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPVSERIF 207
Query: 221 ---------------SSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFDSC- 263
S ++LI +T ++PFW +HP C NVT+ IS D C
Sbjct: 208 GEGHHLRPTFFEPFESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVISHGPNNDGCN 267
Query: 264 ----EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+++ I +C GDD IAIKSG + G G S NI++ N +++
Sbjct: 268 PEYSKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKD 317
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 125/246 (50%), Gaps = 26/246 (10%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG GDG T++T Q A+Y+ + GG++ P G +LT P L S++TL L+
Sbjct: 86 NVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLELS 140
Query: 138 DDAEILAIENEKYWPLMP-PLPSYGYGRE--------HHGPRFGSFIHGQNLKDVVITGH 188
DA +L + +P++P + S E F S I G N+++V I G
Sbjct: 141 KDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIGE 200
Query: 189 NGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
GTI+G + WWK+++ K R V + +ILI +T+++SP WT+HP+ +N
Sbjct: 201 -GTIDGNANFETWWKEHKIKK-GAWRPRTVFLNQCKNILIEGLTIKNSPAWTIHPFQSEN 258
Query: 247 VTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
+ N I Q ++ ++++I C SVGDD IAIKSG G+ +
Sbjct: 259 LKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTE 318
Query: 299 NILIRN 304
+ +RN
Sbjct: 319 KVFVRN 324
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ DFG + DGVTLNTEA A+ A+S KGGG++ +P G WLT P L
Sbjct: 52 PSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLL 108
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A I+ + +P+ + + G + R S I N +++ ITG N
Sbjct: 109 SNVNLYAEKNALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITG-N 162
Query: 190 GTINGQGQAWWKKYRQKLL-------------------------------------NNTR 212
G +G G W + K+ NN +
Sbjct: 163 GVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQ 222
Query: 213 GPLVQIMW----------------SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
+ W S IL+ +T ++SP W +HP C+++T+ + +
Sbjct: 223 KEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFN 282
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+++++ +C+ GDDAI +KSG D+ G G P N++I+N V
Sbjct: 283 PWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTV 341
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 79/301 (26%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
++ ++ FG GDG++LNT++ RA I++ +KGGG + +P G W+T P L S+
Sbjct: 62 VKADTISIVRFGAQGDGISLNTQSINRA---IAETSQKGGGVVLIPAGVWVTGPIELKSN 118
Query: 132 MTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
+ L + DA +L ++ + L+ P++ R S I G NL+++ ITG
Sbjct: 119 INLHIQRDAILLFTDDFDQYKLVEANWEGQPAW---------RNQSPISGSNLENIAITG 169
Query: 188 HNGTINGQGQAW------------WKKYRQK--LLNN----------------TRGP--- 214
G I+G G AW WKK + +LN+ T+ P
Sbjct: 170 -TGIIDGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKNIWYPSASSLNGSKTKNPSAV 228
Query: 215 -------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
L+ + IL+ +T ++SP W LHP C+++T+RN +
Sbjct: 229 VPGKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVR 288
Query: 256 K---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I + +SC+++++E+ VGDD I IKSG D+ G P+ N++IRN V
Sbjct: 289 NPWYAQNGDGIDI-ESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNV 347
Query: 307 V 307
V
Sbjct: 348 V 348
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 50/275 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
PR F+LT+FG GDG T T AF+RA I + GGG++ VPPG +LT +L
Sbjct: 48 PRFPMRTFDLTEFGAKGDGRTDCTLAFRRA---IDRCTNAGGGRVVVPPGSYLTGAIHLK 104
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L +++ + +N K + +P + S G E + FI+ ++ ITG
Sbjct: 105 SNVDLHISEGTTVKFSQNPKDY--LPVVFSRWEGVEVF--NYSPFIYAFEQTNIAITGK- 159
Query: 190 GTINGQG--QAWWK-------KYRQKLLNNT---------------------------RG 213
GT+NGQ + WW +++ + N R
Sbjct: 160 GTLNGQSDNEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIFGEGHYLRP 219
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
+Q ++LI +T+R+SP W +HP C+NV ++N I+ +SC D++
Sbjct: 220 QFIQPYRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINSHGPNNDGCNPESCTDVL 279
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
I+DC GDD IAIKSG + G P+ NI++
Sbjct: 280 IKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIV 314
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G DG TLNT+ I +L GGG L P G +LT + SH
Sbjct: 21 LRAERVDMLKAGAKVDGKTLNTKLINST---IDRLNANGGGTLFFPAGTYLTGSIRMKSH 77
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L ++ + Y P + H G SF I+ + +++ I G
Sbjct: 78 ITLELEAGATLLFSDSFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 129
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 130 E-GTLDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQ 188
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + D+ I + + +SPFWT++P C+NV ++ I +
Sbjct: 189 RRFFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTIHNVPSPNTDGINP 248
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G G P NI I N ++ S
Sbjct: 249 ESCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLS 297
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 127/303 (41%), Gaps = 73/303 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+PR++ F NL DFG VGDG+ L TEAF +A+ A L KKGGG+L VP G W T
Sbjct: 37 MPRVKAPVFPDNEVNLKDFGAVGDGMHLCTEAFAKAIDA---LDKKGGGKLTVPAGVWFT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L + A +L + +PL+ + R P I G+NL +V
Sbjct: 94 GPIVLKSNINLHIEKGAIVLFSPDVDLYPLVETVFEGLDTRRCQSP-----ISGRNLVNV 148
Query: 184 VITGHNGTINGQGQAW----------------------------WKKYRQKLLNNT---- 211
ITG G I+G G W W Y + L +T
Sbjct: 149 AITGQ-GAIDGNGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNM 207
Query: 212 -------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
R +V + ++ + + ++SP W LHP C+NV I N
Sbjct: 208 NVPQNLKTEEEWQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENV 267
Query: 253 FISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ +SC++ +I + VGDD I +KSG D+ G R N+++
Sbjct: 268 EVRNPSYAQNGDGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDG 327
Query: 305 LVV 307
V
Sbjct: 328 CTV 330
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 38/265 (14%)
Query: 70 PRLRPAAFNLTDFGGV---GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
P + F++ DFG D T+A +A+ A S+ GGG + VP G+WLT P
Sbjct: 59 PDIPNKTFDIRDFGAKEMDADKTNKCTDAIHKAIDAASE---SGGGTVLVPAGQWLTGPV 115
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+L S++ L L +A + E++ + +P +P G E + + I+ N+ +V IT
Sbjct: 116 HLKSNINLHLEKNASLFFSEDKTDY--LPVVPQRYEGVEVY--NYSPLIYAANVTNVSIT 171
Query: 187 GHNGTINGQGQAWWK-KYRQKLLNNTRGPLVQ------------------IMWSS-DILI 226
G GT+ GQGQ W + Q N + PL + + W S +IL+
Sbjct: 172 GK-GTLEGQGQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILV 230
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDA 279
ITL +SP W +H +N +R+ ++ + + DS D+++E + GDDA
Sbjct: 231 EGITLNESPMWNIHLVYSQNAIVRDITVNSLDSQNGDGVVVDSSHDVLLEYNQLHTGDDA 290
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRN 304
I +KSG+++ G+A P+ N++IRN
Sbjct: 291 IVLKSGFNEDGLAINIPTENVVIRN 315
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 73/281 (25%)
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENE 148
+T NT+A +A+ A S+ GGG++ VP G WLT P + S++ LFL A I +N
Sbjct: 1 MTKNTDAINKAIAACSE---NGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNF 57
Query: 149 KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW--------- 199
+PL+ L +Y G E + R S I G NL+++ ITG+ G I+G G AW
Sbjct: 58 DDYPLV--LTTY-EGTEQY--RCQSPISGWNLENIAITGY-GVIDGGGDAWRYVKKSKLT 111
Query: 200 ---WKK-----------------------------------------YRQKLLNNTRGPL 215
WKK YR K+ + R +
Sbjct: 112 ESQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYR-KVRDYLRPVM 170
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDC-----KNVTIRNAFISK----IQLFDSCEDM 266
V ++ +IL+ +T ++SP W +HP KNVT+RN + S+ I + +SC+++
Sbjct: 171 VNLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDV-ESCKNV 229
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
VI DC VGDDAI +KSG +++G G P+ N++I + +V
Sbjct: 230 VIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIV 270
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGVWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITGH GT +G G W WKK +Q++ T G L
Sbjct: 159 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACK 217
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 136/285 (47%), Gaps = 58/285 (20%)
Query: 69 IPRLRPA-----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+ R+RP F +TDFG G+ V ++EAF RA+ A GGG++ VPPG WLT
Sbjct: 35 VARIRPPIFPDRDFPITDFGADGEAVADSSEAFARAIAACHA---AGGGRVVVPPGWWLT 91
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P +L S++ L + A IL + K + +P + + G E + F++ +++
Sbjct: 92 GPIHLKSNVNLHVQKGATILFKTDPKAY--LPLVFTRWEGVELMN--YSPFVYAFEQENI 147
Query: 184 VITGHNGTINGQG--QAWW--------------------KKYRQKLLNNT---------- 211
+TG G ++GQ + WW + R +L
Sbjct: 148 AVTGE-GVLDGQCSREHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRV 206
Query: 212 -------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---- 260
R P +Q +++LI ++LR SPFW +HP C+NVTIR I+
Sbjct: 207 FGEGSYLRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINSHGPNNDGI 266
Query: 261 --DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
+SC+ ++IEDC+ S GDD IA+ SG ++ G G P N++IR
Sbjct: 267 DPESCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIR 311
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 55/295 (18%)
Query: 62 WGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
W + + +RP F LT +G VGDG T T+AF++A+ A + GGG++ V
Sbjct: 37 WALVPEILAHIRPPVFPERDFVLTRYGAVGDGRTDCTDAFRQAIEACHR---AGGGRVVV 93
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
P G +LT P +L S++ L L D A + ++ + +P + + G E G + FI+
Sbjct: 94 PRGTFLTGPIHLASNVNLHLDDGATVRFKQDPAAY--LPVVFTRWEGVE--GMNYSPFIY 149
Query: 177 GQNLKDVVITGHNGTINGQGQA--WW-----KKY-------------------------- 203
++V ITG +G ++GQ WW K+Y
Sbjct: 150 AFGQENVAITG-SGVLDGQADENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPP 208
Query: 204 RQKLLNN---TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF 260
Q++L R +Q ++LI +T+ +SP W +HP C+NVT+R +
Sbjct: 209 EQRILGEGSYLRPNFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRSHGPN 268
Query: 261 ------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++IEDC GDD IAIKSG + G PS I+IRN +R
Sbjct: 269 NDGCNPESCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRD 323
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 37 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGVWLT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 94 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 148
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITGH GT +G G W WKK +Q++ T G
Sbjct: 149 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 207
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 208 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 267
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 268 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 326
Query: 302 IRNLVV 307
++N V
Sbjct: 327 VKNNTV 332
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 124/269 (46%), Gaps = 63/269 (23%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKY 150
NTE I++L K GGG L P G +LTA ++ S++TL L A + +N + Y
Sbjct: 38 NTEIINNT---INRLNKAGGGTLFFPSGDYLTASIHMKSNITLELEAGATLRFSDNFDDY 94
Query: 151 WPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL 207
P + H G SF I+ + +++ I G G ++GQG+AWWK++ + L
Sbjct: 95 MPFVE--------MRHEGVMMKSFQPLIYATDAENITIKGE-GKLDGQGKAWWKEFFRVL 145
Query: 208 LN-----------------------------NT-----------RGPLVQIMWSSDILIS 227
++ N R P +Q++ ++ I
Sbjct: 146 IDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLDRRFLRPPFIQLLRCRNVRIE 205
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAI 280
IT+ +SPFWT++P C NVT++ I+ + +SC ++ I DC+ISVGDD I
Sbjct: 206 GITIVNSPFWTVNPNFCDNVTVKGVTINNVPSPNTDGINPESCSNVHISDCHISVGDDCI 265
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IKSG D GRP NI I N + S
Sbjct: 266 TIKSGRDLQARKIGRPCENITITNCTMLS 294
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 137/331 (41%), Gaps = 71/331 (21%)
Query: 36 VLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEA 95
LW+ + ++ A+ + L + + P+ NL DFG VG+G L TEA
Sbjct: 12 CLWVLSACQSSTYKYEAI---YRDLPFDMPRVEAPKFPDRKVNLADFGAVGNGEELCTEA 68
Query: 96 FQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMP 155
F +A+ A L +KGGG L VP G W T P L S++ L L A IL N +PL+
Sbjct: 69 FAKAIDA---LAEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEKGAIILFSPNVDLYPLVE 125
Query: 156 PLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKK- 202
+ R P + G+NL++V ITG G I+G G W WK+
Sbjct: 126 TVFEGLDTRRCQSP-----VSGRNLENVAITGE-GAIDGNGHYWRPLKREKVTESVWKQT 179
Query: 203 ---------------YRQKLLNNT-----------------------RGPLVQIMWSSDI 224
Y Q L +T R +V ++ ++
Sbjct: 180 IARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEEEWQSVRHFLRPVMVSLIECKNV 239
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVG 276
+ + ++SP W LHP C+NV I + +SC++ +I + VG
Sbjct: 240 WLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNTLIVNSTFDVG 299
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD I +KSG D+ G GR N+++ V
Sbjct: 300 DDGICLKSGKDEDGRIRGRVCENVVVDGCTV 330
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N++ FG GDG+TLNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 46 MPKVQQPVFPAYEVNISKFGAKGDGMTLNTKAINDA---IKEVNQRGGGKVIIPEGTWLT 102
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A IL + + +P+ +P+ G E R S I +N +++
Sbjct: 103 GPIELLSNVNLYTERNALILFTGDFEAYPI---IPTSFEGLETR--RCQSPISARNAENI 157
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNN---------------------TRGPLVQIMWSS 222
ITG+ G +G G W ++KL + T G L M
Sbjct: 158 AITGY-GIFDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACK 216
Query: 223 D--------------------------------ILISNITLRDSPFWTLHPYDCKNVTIR 250
D IL+ +T ++SP W LHP C++ T+
Sbjct: 217 DFNVPEGINTDEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVN 276
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 277 NIQVINPWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIV 336
Query: 303 RNLVV 307
+N V
Sbjct: 337 KNNTV 341
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 135/284 (47%), Gaps = 55/284 (19%)
Query: 67 RPIPRLR--PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
R IP++ +N+ DFG V DG TLNT AFQ+ AI + GGG++ VP G++LT
Sbjct: 59 RSIPQVHFSDKLYNINDFGAVADGKTLNTLAFQK---AIQECAANGGGRVLVPNGKYLTG 115
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
+L S++ L L D AEIL N K +P+ + + G E + I+ +N ++
Sbjct: 116 AIHLESNVNLHLEDHAEILFSLNPKDYPI---VHTSWEGTEVM--NYSPLIYAKNKTNIA 170
Query: 185 ITGHNGTINGQGQA--WW-----KKY--------------RQKLLNNT------------ 211
ITG GT+NGQ + WW K Y R+ L++
Sbjct: 171 ITGK-GTLNGQADSTNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVFG 229
Query: 212 -----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSC-- 263
R ++ + L+ +I + +SPFW LHP N+ I + S D C
Sbjct: 230 DGRYLRPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNSHGPNNDGCDP 289
Query: 264 ---EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
++++I +C + GDD IAIK+G D G PS NI+++N
Sbjct: 290 EYSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQN 333
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 26/233 (11%)
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
+G V+ T Q I+ + + GGGQLN+ G + L S TLFL A +L
Sbjct: 13 LGGTVSERTNCLQAT---INDILEAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGA-VLK 68
Query: 145 IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR 204
+E + PP+ S G R + ++G +LK V ITG G ++GQG+ WW+++
Sbjct: 69 FSHET--DVYPPVESRWEGATQTVYR--ACLYGSHLKRVKITGE-GVVDGQGKKWWRRFD 123
Query: 205 QKL--LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-- 260
+K L R L I S ++I N+T +SP WTLHP+DC+NV I N + +
Sbjct: 124 EKAAELEYPRPYLCSIEHSEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPN 183
Query: 261 ------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC ++ I +C VGDD IAIKSG + S +I N+++
Sbjct: 184 TDGLDPESCRNIRIANCCFDVGDDCIAIKSGTED-------ASQSIACENIII 229
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 73/303 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ +F ++ FG GDG TLNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPSFPDYTVSILQFGAKGDGTTLNTKAINDAIKAVNA---KGGGKVVIPEGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A ++ ++ +P++ R P I +N +++
Sbjct: 102 GPIELLSNVNLYTEKNALVVFTDDFNAYPILETSFEGLNTRRCQSP-----ISARNTENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL-----------------------------------L 208
ITGH G +G G +W + KL
Sbjct: 157 AITGH-GVFDGSGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNF 215
Query: 209 NNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NN G L+ I+ S +L+ +T ++SP W LHP C+++TI
Sbjct: 216 NNPEGIETDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQV 275
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ +SC++ +I + GDDAI IKSG D+ G G P N++++N
Sbjct: 276 KVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN 335
Query: 305 LVV 307
V
Sbjct: 336 NTV 338
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 138/333 (41%), Gaps = 68/333 (20%)
Query: 34 FTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNT 93
F L L A A Q N L + + P + NL DFG VGDG TL T
Sbjct: 10 FVSLALTAQAQNCCSQENRYQKYTQNLPFEMQELKAPAIPDRQVNLKDFGAVGDGTTLCT 69
Query: 94 EAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPL 153
EAF +A I KL ++GGG+L VP G W T P L S++ L L A I +E +P+
Sbjct: 70 EAFAKA---IDKLSEQGGGKLIVPGGVWFTGPIVLKSNINLHLEVGAVIQFSGDESLYPV 126
Query: 154 MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT-- 211
+ + G E R S + K++ ITG G I+G GQ W R K+ +
Sbjct: 127 ---IKTSFEGLETR--RCQSPLSANGAKNIAITGQ-GVIDGNGQFWRPVKRGKVTDGQWK 180
Query: 212 -------------------------------------------------RGPLVQIMWSS 222
R +V ++
Sbjct: 181 EILARPGGVEAKKGYWVPNQAYADAEKNADMNVPRAETDEEWNAIKRFLRPVMVSLVNCK 240
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTI-----RN-AFISKIQLFD--SCEDMVIEDCYIS 274
++L+ ++ ++SP W +HP C+NV I RN ++ D SC+++++ +
Sbjct: 241 NVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGDALDLESCKNVLVVNSKFD 300
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
GDD I IKSG D+ G GRP N+++ V
Sbjct: 301 AGDDGICIKSGKDESGRKRGRPCENVVVDGCTV 333
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N++ FG GDG+TLNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 43 MPKVQQPVFPAYEVNISKFGAKGDGMTLNTKAINDA---IKEVNQRGGGKVIIPEGTWLT 99
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A IL + + +P+ +P+ G E R S I +N +++
Sbjct: 100 GPIELLSNVNLYTERNALILFTGDFEAYPI---IPTSFEGLETR--RCQSPISARNAENI 154
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNN---------------------TRGPLVQIMWSS 222
ITG+ G +G G W ++KL + T G L M
Sbjct: 155 AITGY-GIFDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACK 213
Query: 223 D--------------------------------ILISNITLRDSPFWTLHPYDCKNVTIR 250
D IL+ +T ++SP W LHP C++ T+
Sbjct: 214 DFNVPEGINTDEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVN 273
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 274 NIQVINPWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIV 333
Query: 303 RNLVV 307
+N V
Sbjct: 334 KNNTV 338
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N++ FG GDG+TLNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 46 MPKVQQPVFPAYEVNISKFGAKGDGMTLNTKAINDA---IKEVNQRGGGKVIIPEGTWLT 102
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A IL + + +P+ +P+ G E R S I +N +++
Sbjct: 103 GPIELLSNVNLYTERNALILFTGDFEAYPI---IPTSFEGLETR--RCQSPISARNAENI 157
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNN---------------------TRGPLVQIMWSS 222
ITG+ G +G G W ++KL + T G L M
Sbjct: 158 AITGY-GIFDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACK 216
Query: 223 D--------------------------------ILISNITLRDSPFWTLHPYDCKNVTIR 250
D IL+ +T ++SP W LHP C++ T+
Sbjct: 217 DFNVPEGINTDEEWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVN 276
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 277 NIQVINPWYSQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIV 336
Query: 303 RNLVV 307
+N V
Sbjct: 337 KNNTV 341
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 37/264 (14%)
Query: 70 PRLRPAAFNLTDFGG--VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P F++ DFG + +T+A RA+ A + GGG++ +P G WLT P +
Sbjct: 59 PVFPDQTFDIRDFGARQKNNNNHKSTDAIHRAIDAATT---AGGGKVLIPRGNWLTGPIH 115
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
L S++ L L + A + E+++ + +P + G E + + S I+ +N+++V ITG
Sbjct: 116 LKSNINLHLEEGASLYFSEDKEDY--LPVVKHRYEGVETY--NYSSLIYAKNIENVAITG 171
Query: 188 HNGTINGQGQAWWK-KYRQKLLNNTRGPLVQ------------------IMWSS-DILIS 227
G + GQG+ W K Q T+ PL + + W S +I I
Sbjct: 172 K-GILEGQGEHWLKWGTVQPRATATKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIE 230
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAI 280
ITLR+SP W +H ++ +R+ I+ ++ + DS D ++E ++S GDDAI
Sbjct: 231 GITLRESPMWNIHLIYSSHIVVRDITINSVESHNGDGIVLDSSSDALLEYNHLSTGDDAI 290
Query: 281 AIKSGWDQYGIAYGRPSMNILIRN 304
+KSG+++ G+ P+ N++IRN
Sbjct: 291 VLKSGFNEEGLEINIPTENVVIRN 314
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 50/272 (18%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++T G G+ +T+AF+ A +S++ GGG+L+VPPG +L P L SH+ +A
Sbjct: 4 DVTTLGADPTGLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEVA 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I +++ +P+ + + G E H + I + +D+ I+G G I+GQG
Sbjct: 61 RGARIRFVQDPDRYPV---VFTRWEGVECHA--YAPMIFVEGAEDIRISG-GGVIDGQGD 114
Query: 198 AWWKKYRQ---------------------------------KLLNNTRGPLVQIMWSSDI 224
AWW+ YR + + R PL+Q+ S +
Sbjct: 115 AWWRMYRDYREGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRV 174
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLFDSCEDMVIEDCYISVG 276
+I I LR+S FW H V IR +A + DS ++ IEDC VG
Sbjct: 175 VIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVG 234
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DD + +KSG D+ G GRP+ +++IR ++R
Sbjct: 235 DDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMR 266
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 43/272 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
PR N+ D+G V D L+T+A Q+A+ +S+ KGGG++ +P G + T L
Sbjct: 12 PRFPDLTVNVLDYGAVADDDKLDTQAIQKAIDEVSE---KGGGKVVIPKGTYDTGAITLK 68
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
++ L L D L + P + S+ G+ + + +FI+ ++ ++ +TG
Sbjct: 69 DNVNLCLEDKETKLQFTQDINHDNYPLVYSHWEGQPMY--NYSAFIYAKDAVNIALTGQ- 125
Query: 190 GTINGQ---GQAWWKKYRQKL-------------LNNTRGPL---------------VQI 218
GT++GQ G W R + +NN R P+ +Q+
Sbjct: 126 GTLDGQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQV 185
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCED------MVIEDCY 272
+ ++L+ +TL SP W ++P C NVT+R IS + D ++IED Y
Sbjct: 186 IGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHISTKAANNDGIDPESSNYVLIEDNY 245
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
GDD IAIKSG + G A PS NI+IRN
Sbjct: 246 FDTGDDCIAIKSGRNADGRATNTPSQNIIIRN 277
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 57/277 (20%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ + GG G+ TEA Q A I K K GGG + P G +LT L S++T+ L
Sbjct: 26 LNILNEGGNNKGIKC-TEAIQGA---IEKASKNGGGTIFFPAGEYLTGALKLKSNITIHL 81
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A + EN + Y P + + G + P F + ++++++ I G G I+GQ
Sbjct: 82 DSGALLKFSENFDDYLPYVE-MRYEGIVMQSFSPLF----YAKDVENITIKGR-GVIDGQ 135
Query: 196 GQAWWKK-YRQKLLNNTRGPL----VQIMWSS---------------------------- 222
G+AWW + YR + +GP+ Q MW+
Sbjct: 136 GKAWWNEVYR---IETAKGPIPETKYQKMWTEQNKGIVYEPYYKRTIDKHFFRPSFFQAY 192
Query: 223 ---DILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFD-------SCEDMVIEDCY 272
+ILI +T ++SPFWT++P C NVT+ I+ + SC ++ I +C+
Sbjct: 193 NCKNILIEGVTFKNSPFWTINPEFCDNVTVTGITINNPHSPNTDGINPSSCTNVHISNCH 252
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
ISVGDD I IKSG D G YG+ + N+ I N + S
Sbjct: 253 ISVGDDCITIKSGRDADGRKYGKATENVTITNCTMLS 289
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 80/341 (23%)
Query: 38 WLAAF-ASVFIWQRNA-------VVGG--FSFLRWGVASRPIPRLRPAAFNLTDFGGVGD 87
WL + A+ F+W A V+ +S L + +A P + ++T+FG V D
Sbjct: 10 WLLSLGAATFVWSGAANAQTVSPVISDEVYSNLPFQMAKVQQPTFPDHSRSITEFGAVAD 69
Query: 88 GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN 147
G+TLNTEAF + + A+S ++GGG + VP G WLT P L S++ L L ++A +L +
Sbjct: 70 GITLNTEAFAQTIDAVS---QQGGGTVVVPAGLWLTGPIVLKSNINLHLEENALVLFTAD 126
Query: 148 EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW-------- 199
+P+ + + G E R S + +++ ITG G ++G G W
Sbjct: 127 HTQYPI---IKTSFEGLETR--RCQSPVSANGAENIAITGK-GVMDGNGDTWRPVKKGKM 180
Query: 200 ----WKKYRQ-------------------------KLLNNTRGPLVQIMWSS-------- 222
W K K N G + W+S
Sbjct: 181 TASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFNVPEGIETEEDWNSIRDWLRPV 240
Query: 223 --------DILISNITLRDSPFWTLHPYDCKNVTIRNAFISK--------IQLFDSCEDM 266
+L+ +T ++SP W LHP C+++T+ N +S +SC +
Sbjct: 241 LLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNGDALDIESCNRV 300
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
++ + GDD I IKSG D+ G G P NI+IR+ VV
Sbjct: 301 LVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVV 341
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 73/303 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ +F N+ FG GDG+TLNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPSFPDYTVNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A I+ ++ +P++ R P I +N +++
Sbjct: 102 GPIELLSNVNLYTEKNALIVFSDDFNAYPILETSFEGLNTRRCQSP-----ISARNAENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL-----------------------------------L 208
ITG+ G +G G +W + KL
Sbjct: 157 AITGY-GVFDGSGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEF 215
Query: 209 NNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NN G L+ I+ S +L+ +T ++SP W LHP C+++TI
Sbjct: 216 NNPEGIETEEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQV 275
Query: 253 FI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ +SC++ +I + GDDAI IKSG D+ G G P N++++N
Sbjct: 276 KVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN 335
Query: 305 LVV 307
V
Sbjct: 336 NTV 338
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 83/308 (26%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ +F N+ FG GDG+TLNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPSFPDYTVNILQFGAKGDGITLNTKAINDAIKAVNA---KGGGKVVIPEGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A I+ ++ +P++ R P I +N +++
Sbjct: 102 GPIELLSNVNLYTEKNALIVFSDDFNAYPILETSFEGLNTRRCQSP-----ISARNAENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL-----------------------------------L 208
ITG+ G +G G +W + KL
Sbjct: 157 AITGY-GVFDGSGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEF 215
Query: 209 NNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
NN G L+ I+ S +L+ +T ++SP W LHP C+++T
Sbjct: 216 NNPEGIETEEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHIT---- 271
Query: 253 FISKIQLF-------------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
I+++++F +SC++ +I + GDDAI IKSG D+ G G P N
Sbjct: 272 -INQVKVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQN 330
Query: 300 ILIRNLVV 307
++++N V
Sbjct: 331 VIVKNNTV 338
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 116/231 (50%), Gaps = 36/231 (15%)
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
+ DG T ++ Q+ I G GGG L VP GR+L +P +L S + L LA A +LA
Sbjct: 23 LADGTTDQAKSLQQT---IDSCGATGGGTLIVPAGRYLISPISLCSRVNLQLASGATLLA 79
Query: 145 IENE-KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY 203
N Y P +P L I+G +L DV +TG GTI+G G WW+++
Sbjct: 80 STNAADYTPKLPNL-----------------INGDSLTDVSLTG-TGTIDGNGAVWWQRF 121
Query: 204 --RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS------ 255
K LN R L+ + S ++ I +TL +SP + L P C+NVTI+N I+
Sbjct: 122 IDSGKTLNRPR--LIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPSDSP 179
Query: 256 KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
D +C ++I++C I GDD IAIK G I +P +I IRN
Sbjct: 180 NTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRN 228
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 26/246 (10%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG GDG T++T Q A+Y+ + GG++ P G +LT P L S++TL L+
Sbjct: 86 NVRDFGAKGDGKTIDTSFIQAAIYSCPE-----GGRVFFPGGIYLTGPIFLKSNITLELS 140
Query: 138 DDAEILAIENEKYWPLMP-PLPSYGYGRE--------HHGPRFGSFIHGQNLKDVVITGH 188
DA +L + +P++P + S E F S I G N+++V I G
Sbjct: 141 KDAVLLGANDRNLYPILPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVNIIGE 200
Query: 189 NGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
GTI+G + WWK+++ K R V + +ILI +T+++SP WT+HP+ +N
Sbjct: 201 -GTIDGNANFETWWKEHKIKK-GAWRPRTVFLNQCKNILIEGVTIKNSPAWTIHPFQSEN 258
Query: 247 VTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
+ N I + ++ ++++I C SVGDD IAIK+G G+ +
Sbjct: 259 LKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTE 318
Query: 299 NILIRN 304
+ +RN
Sbjct: 319 KVFVRN 324
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGVWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISVRNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITGH GT +G G W WKK +Q++ T G L
Sbjct: 159 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACK 217
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 124/243 (51%), Gaps = 21/243 (8%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+N+ D+G V D T A A+ A S+ GGG + VP G ++T L SH+ L
Sbjct: 2 CTYNIVDYGAVKDSGVPATAAIAAAITAASE---AGGGTVVVPAGTFVTGAIFLKSHIEL 58
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L+ A + N +P++ G RE H S I+G++L++V +TG +G ING
Sbjct: 59 RLSPGAVLSFSTNPDDYPVVKSRWE-GVQREVHA----SCIYGEDLENVTVTG-SGCING 112
Query: 195 QGQAWWKKYRQK--LLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
GQ WW+K R + L+ R L+ + I +++L DSP WT++P C NVTI N
Sbjct: 113 NGQPWWEKQRNRPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNV 172
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I +SC ++ I +C+I VGDD IAIK+G ++ A P NI I N
Sbjct: 173 SILNPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITN 230
Query: 305 LVV 307
+
Sbjct: 231 CTM 233
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 70/298 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+ N++DFG +GDG+T N+EAF +I + GGG++ V G WLT P +
Sbjct: 51 PQFPDYVVNISDFGAIGDGITDNSEAF---AASIDDVAANGGGKVVVSRGIWLTGPIKMK 107
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+L D A +L + +PL + + G E + R S IH NL+++ TG N
Sbjct: 108 SNINLYLEDGAVVLFSSDFDKYPL---IETSFEGLETY--RCMSPIHAHNLENIAFTG-N 161
Query: 190 GTINGQGQAW------------W------------------------------------- 200
G +G G AW W
Sbjct: 162 GVFDGSGDAWRPVKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDL 221
Query: 201 --KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-- 256
K+ +K+ + R +V I +L+ T ++SP W +HP +NV IRN I
Sbjct: 222 SSKEEYEKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPW 281
Query: 257 -------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ L +SC++++I + VGDDAI KSG ++ G G P+ N++++N +V
Sbjct: 282 YSQNGDGLDL-ESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIV 338
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 38/289 (13%)
Query: 31 KTLFTVLWLAAFAS-VFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGV 89
KT+ A F S VF ++ A + P+ N+ DFG +GDG+
Sbjct: 15 KTMLQAGAAATFTSPVFALEKKA------------HTTPVTAAPSVQLNVRDFGAIGDGI 62
Query: 90 TLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK 149
TL TE+ QR I + G GGG++ +P GR+LT +L + +TL LA + IL
Sbjct: 63 TLETESLQR---TIDRCGVLGGGEVIIPAGRYLTGSVSLRTKVTLRLAAECVILG----- 114
Query: 150 YWPLMPPLPSYGYGREH-HG---PRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ 205
P L Y + G P + IH + + + + G G+I G + ++
Sbjct: 115 ----SPDLAHYAVSQVRWEGKWIPGYLGLIHALDARKIAVLG-PGSIEGNVAVAGRPTKE 169
Query: 206 KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL------ 259
L R L++ ++ D+ + + + W++HP C N+ RN +
Sbjct: 170 NPLR--RPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLTVRSTLTNGDGID 227
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DSC ++I+ C I+ GDD I++KSG + RP+ ++ I N +
Sbjct: 228 IDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTLE 276
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKEVNQRGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITG+ GT +G G W WKK +Q++ T G
Sbjct: 159 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 217
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NVMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 44/281 (15%)
Query: 62 WGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
W +A + + L P F N+ DFG V DG AF + AI++ +GGG++ V
Sbjct: 37 WDIADKIVAELNPVTFPDKTYNIADFGAVADGRMPCKGAFDK---AITQCSDQGGGRIIV 93
Query: 117 PPGR-WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
P G ++ P S++ + L D A + N++ + +P + + G E + I
Sbjct: 94 PAGTYYMNGPLVFKSNVNIHLEDGAILNFSSNQEDY--LPAVITRWEGTELFN--YSPLI 149
Query: 176 HGQNLKDVVITGHNGTINGQG----QAWW--KKYRQKLLNNT------------------ 211
+ +++++ +TG GTING G AW + +++L
Sbjct: 150 YAYHVQNIALTGK-GTINGNGSKKFSAWADNQNIDKEILRRMGRENLPIYRRIFGEGFRL 208
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCED 265
R ++ ++ I IT++DSPFW +HP C NV +R+ + +SC +
Sbjct: 209 RPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFCNNVIVRDVTVDSHNRNNDGCDPESCSN 268
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
++IE C S GDDAIAIKSG D G+P+ N++IRN
Sbjct: 269 VLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCT 309
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 37 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGVWLT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 94 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISVRNAENI 148
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITGH GT +G G W WKK +Q++ T G L
Sbjct: 149 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACK 207
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 208 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 267
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 268 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 326
Query: 302 IRNLVV 307
++N V
Sbjct: 327 VKNNTV 332
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 141/337 (41%), Gaps = 69/337 (20%)
Query: 31 KTLFTVLWLAAFASVFIW-QRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGV 89
K + VL+L +A + W Q ++ L + + PR +L DFG VG+GV
Sbjct: 2 KRISIVLFLCVWAVLSSWAQTYKYEEIYTNLPFAMPKVEAPRFPDLKVSLPDFGAVGNGV 61
Query: 90 TLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK 149
L TEAF++A I L +GGG L VP G WLT P L S++ L + A +L + +
Sbjct: 62 ELCTEAFEKA---IETLSSRGGGHLIVPAGIWLTGPIVLKSNIDLHIEKGAVVLFSPDVE 118
Query: 150 YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW---------- 199
+PL+ + R P + G+NL +V ITG G I+G G W
Sbjct: 119 LYPLVETVFEGLDTRRCQSP-----VSGRNLTNVAITGQ-GAIDGNGHFWRPLKREKVTE 172
Query: 200 --WKK----------------YRQKLLNNT-----------------------RGPLVQI 218
WK+ Y Q L +T R +V +
Sbjct: 173 SVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEWQSVRHFLRPVMVSL 232
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIED 270
+ ++ + + ++SP W LHP C+NV I + +SC++ +I +
Sbjct: 233 IECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNALIVN 292
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
VGDD I +KSG D+ G R N+++ V
Sbjct: 293 STFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTV 329
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + + GGG++ +P G WLT
Sbjct: 37 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQHGGGKVIIPEGIWLT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 94 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 148
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITGH GT +G G W WKK +Q++ T G L
Sbjct: 149 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACK 207
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 208 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 267
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 268 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 326
Query: 302 IRNLVV 307
++N V
Sbjct: 327 VKNNTV 332
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 50/272 (18%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++T G G+ +T+AF+ A +S++ GGG+L+VPPG +L P L SH+ +A
Sbjct: 4 DVTTLGADPTGLRESTDAFREA---LSRIEAAGGGRLHVPPGDYLVGPLRLCSHLEFEVA 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I +++ +P+ + + G E H + + + +DV I+G G I+GQG
Sbjct: 61 RGARIRFVQDPDRYPV---VFTRWEGVECHA--YAPMLFVEGAEDVRISG-GGVIDGQGA 114
Query: 198 AWWKKYRQ---------------------------------KLLNNTRGPLVQIMWSSDI 224
+WW+ YR + + R PL+Q+ S +
Sbjct: 115 SWWRMYRDYREGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRV 174
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLFDSCEDMVIEDCYISVG 276
+I I LR+S FW H V IR +A + DS ++ IEDC VG
Sbjct: 175 VIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVG 234
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DD + +KSG D+ G GRP+ +++IR ++R
Sbjct: 235 DDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMR 266
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I + + GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQHGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTKQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITGH GT +G G W WKK +Q++ T G L
Sbjct: 159 AITGH-GTFDGNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACK 217
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLYLNTKAINDA---IKEVNQRGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITG+ GT +G G W WKK +Q++ T G
Sbjct: 159 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACK 217
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 59 FLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPP 118
F+ GV + R A F D+G GDGVT NT A Q A+ A +K G G +
Sbjct: 7 FVVLGVIALSTGLARAAEFRANDYGAKGDGVTANTVAIQSAIDAAAKTG----GTIVFAS 62
Query: 119 GRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQ 178
G +LT L S L + EI ++++ +P+MP + G E P + I+
Sbjct: 63 GVYLTGSIFLKSGTRLRVDKGVEIRGMQDQAAYPVMPTRIA---GIEMKWP--AALINVY 117
Query: 179 NLKDVVITGHNGTINGQGQAWWKKYRQ-------------KLLNNTRGPLVQIMWSSDIL 225
+V I+G G I+G G+ WW KY Q + R L+QI S ++
Sbjct: 118 EQSNVKISGQ-GVIDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVE 176
Query: 226 ISNITLRDSPFWTLH-----PYDCKNVTIRNAFISK------IQLFDSCEDMVIEDCYIS 274
+ +TLR S FWT+H VTIRN + I + DS D+++++ I
Sbjct: 177 LQGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDV-DSSSDVLVQNADIE 235
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DDAI +K+G D G+ RP+ N++I ++ VR
Sbjct: 236 CNDDAIVMKAGRDADGLRVNRPTENVVIHDVTVR 269
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 47 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKEVNQRGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITG+ GT +G G W WKK +Q++ T G
Sbjct: 159 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 217
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 52/285 (18%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
VA+ +P+ + FN+ D+G V DG LNTEA A+ A + GGG++ +P G+++T
Sbjct: 42 VANIQLPKFKNQEFNVMDYGAVADGSVLNTEAIAEAIKACN---AAGGGKVVLPAGKYVT 98
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P +L ++ L +A+ AE+L ++ +PL SY G E F I+ ++ K++
Sbjct: 99 GPIHLLDNVNLEIAEGAEVLFTTDKSLFPLAH--TSY-EGTELM--NFSPLIYAKDKKNI 153
Query: 184 VITGHNGTINGQGQ--AWW---------------------KKYRQKLLNN---------- 210
ITG G +NGQ WW KK ++ +
Sbjct: 154 AITGK-GVLNGQANNGNWWPWCGNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFG 212
Query: 211 ----TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCE- 264
R ++ ++LI +IT+ ++PFW +HP NV + + S D C+
Sbjct: 213 MGEFLRPTFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDSHGPNNDGCDP 272
Query: 265 ----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
++ I++C + GDD IAIKSG ++ G PS NI++ +
Sbjct: 273 EYAKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDC 317
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N+ FG GDG+ LNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 37 MPKVQQPVFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKEVNQRGGGKVIIPEGIWLT 93
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 94 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 148
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITG+ GT +G G W WKK +Q++ T G
Sbjct: 149 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 207
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 208 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 267
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 268 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 326
Query: 302 IRNLVV 307
++N V
Sbjct: 327 VKNNTV 332
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 68/290 (23%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 53 NICDFGAKSDGVTLNTEAINNAIKVVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLHAE 109
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN-------- 189
+A I+ + +P++ S+ R S I N +++ ITG+
Sbjct: 110 KNALIVFSSDTSLYPII--TTSF---EGLDAKRCQSPISAMNAENIAITGYGVFDGAGDR 164
Query: 190 ---------------------GTINGQGQAWWKKY---------------RQKLLNNT-- 211
G ++ G+ W+ R ++ +
Sbjct: 165 WRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWE 224
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKI 257
R L+ I+ S IL+ +T ++SP W LHP C+++T+ + +
Sbjct: 225 DMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDA 284
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P NI++RN V
Sbjct: 285 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTV 334
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P ++ AF N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 47 MPEVQQPAFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IDTSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITG+ GT +G G W WKK +Q++ T G L
Sbjct: 159 AITGY-GTFDGNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 217
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 71/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R FN+ +G DG+TLNT+A +A I++ + GGG + +P G WLT P L
Sbjct: 263 PYFRKDTFNIARYGSKADGITLNTQAINQA---ITRCSQAGGGTVLIPEGLWLTGPLVLR 319
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L LA A + N +P+ + + G++ + R + I G +L +V ITG +
Sbjct: 320 SNVNLHLASGALLQFSRNRDDYPI---VATTWEGQDAY--RCQAPIWGVDLVNVAITG-S 373
Query: 190 GTINGQGQAWW--KKYRQKL-------------------------------------LNN 210
G I+G G+ W KK +Q + N
Sbjct: 374 GVIDGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIAN 433
Query: 211 TRGP-------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
+ P +V + +L+ +T ++SP WTLHP C++VT+R + K
Sbjct: 434 GKTPAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTV-KN 492
Query: 258 QLF---------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
Q + +SC + ++E+C GDD I IKSG D+ G G P+ N +IR+ V
Sbjct: 493 QWYAQNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRV 551
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 129/299 (43%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ DFG + DGVTLNTEA A+ A+S KGGG++ +P G WLT P L
Sbjct: 52 PSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVSS---KGGGKVIIPEGLWLTGPVVLL 108
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A I+ + +P+ + + G + R S I N +++ ITG N
Sbjct: 109 SNVNLYAEKNALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITG-N 162
Query: 190 GTINGQGQAWWKKYRQKLL-------------------------------------NNTR 212
G +G G W + K+ NN +
Sbjct: 163 GVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQ 222
Query: 213 GPLVQIMW----------------SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
+ W S IL+ +T ++SP W +HP C+++T+ + +
Sbjct: 223 KEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFN 282
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+++++ +C+ GDDAI +KSG D+ G G N++I+N V
Sbjct: 283 PWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTV 341
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 63/269 (23%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKY 150
NTE I++L K GGG L P G +LTA ++ S++TL L A + +N + Y
Sbjct: 38 NTEIINNT---INRLNKAGGGTLFFPSGDYLTASIHMKSNITLELEAGATLRFSDNFDDY 94
Query: 151 WPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL 207
P + H G SF I+ + +++ I G G ++GQG+AWWK++ + L
Sbjct: 95 MPFVE--------MRHEGVMMKSFQPLIYATDAENITIKGE-GKLDGQGKAWWKEFFRVL 145
Query: 208 LN-----------------------------NT-----------RGPLVQIMWSSDILIS 227
++ N R P +Q + ++ I
Sbjct: 146 IDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHSTLDRRFLRPPFIQPLRCRNVRIE 205
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAI 280
IT+ +SPFWT++P C NVT++ I+ + +SC ++ I DC+ISVGDD I
Sbjct: 206 GITIVNSPFWTVNPNFCDNVTVKGVTINNVPSPNTDGINPESCSNVHISDCHISVGDDCI 265
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IKSG D GRP NI I N + S
Sbjct: 266 TIKSGRDLQARKIGRPCENITITNCTMLS 294
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 136/332 (40%), Gaps = 71/332 (21%)
Query: 35 TVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTE 94
LWL + ++ AV + L + + P+ NL DFG VG+G L T
Sbjct: 11 VCLWLLSACQSSTYKYEAV---YKDLPFDMPRVEAPKFPDRKVNLADFGAVGNGEELCTA 67
Query: 95 AFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLM 154
AF +A+ A L +KGGG L VP G W T P L S++ L L A IL + +PL+
Sbjct: 68 AFAKAIDA---LAEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEKGAVILFSPDVDLYPLV 124
Query: 155 PPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKK 202
+ R P + G+NL++V ITG G I+G G W WK+
Sbjct: 125 ETVFEGLDTRRCQSP-----VSGRNLENVAITGE-GAIDGNGHYWRPLKREKVTEGVWKQ 178
Query: 203 ----------------YRQKLLNNT-----------------------RGPLVQIMWSSD 223
Y Q L +T R +V ++ +
Sbjct: 179 TIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSLIECKN 238
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISV 275
+ + + ++SP W LHP C+NV I + +SC++ +I + V
Sbjct: 239 VWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNALIVNSTFDV 298
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
GDD I +KSG D+ G GR N+++ V
Sbjct: 299 GDDGICLKSGKDEDGRRRGRVCENVVVDGCTV 330
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 68/290 (23%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 59 NICDFGAKSDGVTLNTEAINNAIKVVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLHAE 115
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN-------- 189
+A I+ + +P++ S+ R S I N +++ ITG+
Sbjct: 116 KNALIVFSSDTSLYPII--TTSF---EGLDAKRCQSPISAMNAENIAITGYGVFDGAGDR 170
Query: 190 ---------------------GTINGQGQAWWKKY---------------RQKLLNNT-- 211
G ++ G+ W+ R ++ +
Sbjct: 171 WRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITSEEWE 230
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKI 257
R L+ I+ S IL+ +T ++SP W LHP C+++T+ + +
Sbjct: 231 DMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDA 290
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P NI++RN V
Sbjct: 291 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTV 340
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 68/298 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ DFG + DGVTLNTEA A+ +S KGGG++ +P G WLT P L
Sbjct: 52 PSFPDYEVNIRDFGALSDGVTLNTEAINNAIKTVSS---KGGGKVIIPEGLWLTGPVVLL 108
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A I+ + +P+ + + G + R S I N +++ ITG
Sbjct: 109 SNVNLYTEKNALIVFSSDTSLYPI---IEASFEGLDTK--RCQSPISAMNAENIAITGSG 163
Query: 190 -----------------------------GTINGQGQAWW--------------KKYRQK 206
G ++ G+ W+ + QK
Sbjct: 164 VFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNSGQK 223
Query: 207 LLNNT---------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--- 254
+ + R ++ I+ S IL+ +T ++SP W +HP C+++T+ + +
Sbjct: 224 EITDEEWIYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNP 283
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+++++ +C+ GDDAI +KSG D+ G G P N++I+N V
Sbjct: 284 WYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTV 341
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 73/301 (24%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R FN++ +G DG+T+NT+A +A I GGG + VP G W+T P L
Sbjct: 272 PVFRKDTFNISRYGAKADGITVNTKAINQA---IEICNAAGGGTVLVPKGLWVTGPIVLK 328
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A + +N +P++ L ++ G+E + R + I G +L+++ ITG
Sbjct: 329 SNVNLHLEKGALLQFSKNYDDYPIV--LTTW-EGQESY--RCQAPIWGVDLENIAITGE- 382
Query: 190 GTINGQGQAW--WKKYRQ--------------------------------------KLLN 209
G ++G G AW K+ +Q ++LN
Sbjct: 383 GVLDGGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILN 442
Query: 210 NT--------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
R ++ + +I+I +T ++SP WT+HP C+++T++N +S
Sbjct: 443 GVKPTPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVS 502
Query: 256 K---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I L +SC + V+E C S GDD I IKSG D+ G G P+ N +I++ +
Sbjct: 503 NPWYAQNSDAIDL-ESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCI 561
Query: 307 V 307
V
Sbjct: 562 V 562
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 91/181 (50%), Gaps = 29/181 (16%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P R + LTDFGGVGDG T NT+AFQ A+ +S GG L VPPG+WLT FN
Sbjct: 162 PAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFN 221
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREH-HGPRFGSFIHGQNLKDVVIT 186
LTSH TLFL +A IL ++E WP +P LPSYG GR+ GP + +++ +T
Sbjct: 222 LTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDGPYMIEIMFFDHIQISNLT 281
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
L N+ V ++SSDI+I +T+ L P D N
Sbjct: 282 ---------------------LINSLSLFVHPIYSSDIIIQGLTI-------LAPIDSPN 313
Query: 247 V 247
Sbjct: 314 T 314
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ F ++ +FG GDG+ LNT+A A+ A++ KGGG++ +P G WLT
Sbjct: 45 MPKVEQPTFPNYTVSIVEFGAKGDGIMLNTKAINDAIKAVNA---KGGGKVVIPEGLWLT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A IL ++ + +P++ R P I N +++
Sbjct: 102 GPIELLSNVNLYTEMNALILFTDDFEAYPIIKTSFEGLDTRRCQSP-----ISAWNAENI 156
Query: 184 VITGHNGTINGQGQAWWKKYRQKL------------------------------------ 207
ITGH G +G G +W + KL
Sbjct: 157 AITGH-GVFDGSGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATK 215
Query: 208 -LNNTRG----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
NN G L+ I+ S +L+ +T ++SP W LHP C+++TI
Sbjct: 216 DFNNPEGIETDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIH 275
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 276 NVKVFNPWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIV 335
Query: 303 RNLVV 307
+N V
Sbjct: 336 KNNTV 340
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 121/265 (45%), Gaps = 43/265 (16%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++ DFG VG G +T A Q A+ + G G + VP G++LT P + SH TL L
Sbjct: 9 DVRDFGAVGTGDERDTAALQSALDECAGTG----GTVVVPSGKYLTGPLTVGSHTTLELE 64
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + + + + +P S G E G F + ++V ITG GT++GQG
Sbjct: 65 AGATLSFVRDHEAFPARE---SRWEGWEQTG--FHPCLLVAEAENVEITGR-GTVDGQGD 118
Query: 198 AWWKKY-------------RQKLLNNT------------RGPLVQIMWSSDILISNITLR 232
WW+ Y R + R PL Q+ S+++ +S ITLR
Sbjct: 119 YWWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLR 178
Query: 233 DSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKS 284
+SPFW H NVT+ + + DS + I DCY++ GDDA+ IKS
Sbjct: 179 NSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKS 238
Query: 285 GWDQYGIAYGRPSMNILIRNLVVRS 309
G D+ G GRP+ I + N V +
Sbjct: 239 GKDEEGRRIGRPASGITVTNCTVEA 263
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 138/306 (45%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P ++ AF N+ FG GDG+ LNT+A A I + ++GGG++ +P G WLT
Sbjct: 47 MPEVQQPAFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQRGGGKVIIPEGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 104 GPIELLSNVNLYTEQNALVLFTGDFEAYPI---IDTSFEGLETR--RCQSPISARNAENI 158
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
+TG+ GT +G G W WKK +Q++ T G L
Sbjct: 159 AVTGY-GTFDGNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACK 217
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S +L+ +T ++SP W LHP C++ T+
Sbjct: 218 DFNVPEGINTDEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVN 277
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 278 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 336
Query: 302 IRNLVV 307
++N V
Sbjct: 337 VKNNTV 342
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ DFG + DGVTLNTEA A+ A++ KGGG++ +P G WLT P L
Sbjct: 52 PSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVNS---KGGGKVIIPEGLWLTGPVVLL 108
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A I+ + +P+ + + G + R S I N +++ ITG
Sbjct: 109 SNVNLYAEKNALIVFSSDTSLYPI---IDTSFEGLDTK--RCQSPISAMNAENIAITGS- 162
Query: 190 GTINGQGQAW------------WKKY--------------------------------RQ 205
G +G G W WK Q
Sbjct: 163 GVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQNNGQ 222
Query: 206 KLLNNT---------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
K + + R ++ I+ S IL+ +T ++SP W +HP C+++T+ + +
Sbjct: 223 KEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFN 282
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+++++ +C+ GDDAI +KSG D+ G G P N++I+N V
Sbjct: 283 PWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTV 341
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 68/297 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFGG DGV LNT+A A+ A++ GGG++ +P G WLT P L
Sbjct: 51 PTFPEYSVNIVDFGGKNDGVALNTQAINDAIKAVNA---HGGGKVIIPEGIWLTGPIELL 107
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A ++ ++ +P++ R P I +N +++ ITG+
Sbjct: 108 SNVNLYTEKNALVVFTDDFSAYPIIKTSFEGLDTRRCQSP-----ISARNAENIAITGY- 161
Query: 190 GTINGQGQAWWKKYRQKL-----------------------------------LNNTRG- 213
G +G G +W + KL NN G
Sbjct: 162 GVFDGSGDSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGI 221
Query: 214 ---------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
L+ I+ S +L+ +T ++SP W LHP C+++TI N +
Sbjct: 222 DTDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPW 281
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + GDDAI IKSG D+ G G P N+++++ V
Sbjct: 282 YSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTV 338
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 75/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ F N++ FG GDG+TLNT+A A I ++ ++GGG++ +P G WLT
Sbjct: 36 MPKVQQPVFPAYEVNISKFGAKGDGMTLNTKAINDA---IKEVNQRGGGKVIIPEGTWLT 92
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P++P R P I ++ +++
Sbjct: 93 GPIELLSNVNLYTERNALVLFTGDFEAYPIIPTSFEGLDTRRCQSP-----ISARDAENI 147
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNN---------------------TRGPLVQIMWSS 222
ITG+ G +G G W ++KL + T G L M
Sbjct: 148 AITGY-GIFDGNGDCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACK 206
Query: 223 D--------------------------------ILISNITLRDSPFWTLHPYDCKNVTIR 250
D +L+ +T ++SP W LHP C+++T+
Sbjct: 207 DFNVPEGINTDEEWNEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVN 266
Query: 251 NAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N + +SC++ +I + GDDAI IKSG D+ G G P N+++
Sbjct: 267 NIQVINPWYSQNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIV 326
Query: 303 RNLVV 307
+N V
Sbjct: 327 KNNTV 331
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 135/331 (40%), Gaps = 71/331 (21%)
Query: 36 VLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEA 95
LWL + ++ AV + L + + P+ NL DFG VG+G L T A
Sbjct: 12 CLWLLSACQSSTYKYEAV---YKDLPFDMPRVEAPKFPDRKVNLADFGAVGNGEELCTAA 68
Query: 96 FQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMP 155
F +A I L +KGGG L VP G W T P L S++ L L A IL + +PL+
Sbjct: 69 FAKA---IDTLAEKGGGHLIVPAGVWFTGPIVLKSNIDLHLEKGAVILFSPDVDLYPLVE 125
Query: 156 PLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKK- 202
+ R P + G+NL++V ITG G I+G G W WK+
Sbjct: 126 TVFEGLDTRRCQSP-----VSGRNLENVAITGE-GAIDGNGHYWRPLKREKVTEGVWKQT 179
Query: 203 ---------------YRQKLLNNT-----------------------RGPLVQIMWSSDI 224
Y Q L +T R +V ++ ++
Sbjct: 180 IARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSVRHFLRPVMVSLIECKNV 239
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVG 276
+ + ++SP W LHP C+NV I + +SC++ +I + VG
Sbjct: 240 WLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGDGLDLESCKNALIVNSTFDVG 299
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD I +KSG D+ G GR N+++ V
Sbjct: 300 DDGICLKSGKDEDGRRRGRVCENVVVDGCTV 330
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 71/300 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG DG+TLNT+A A I ++ KGGG++ +P G WLT P L
Sbjct: 54 PTFPDYSVNIIDFGAKPDGITLNTKAINDA---IQQVNAKGGGKVIIPEGLWLTGPIELL 110
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A +L + +P+ + + G E R S I +N +++ ITGH
Sbjct: 111 SNVNLYTEKNALVLFSADHSLYPI---INTSFEGLETR--RCQSPISARNAENIAITGH- 164
Query: 190 GTINGQGQAWWKKYRQKL--------------------------------------LNNT 211
G +G G W + KL N
Sbjct: 165 GVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVP 224
Query: 212 RGPLVQIMWS----------------SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
RG L W + +L+ T ++SP W LHP C+N+TI +S
Sbjct: 225 RGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVS 284
Query: 256 K--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC +I + GDD I IKSG D+ G G P N+++ N V
Sbjct: 285 NPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTV 344
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 71/300 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG DG+TLNT+A A I ++ KGGG++ +P G WLT P L
Sbjct: 54 PTFPDYSVNIIDFGAKPDGITLNTKAINDA---IQQVNAKGGGKVIIPEGLWLTGPIELL 110
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A +L + +P+ + + G E R S I +N +++ ITGH
Sbjct: 111 SNVNLYTEKNALVLFSADHSLYPI---INTSFEGLETR--RCQSPISARNAENIAITGH- 164
Query: 190 GTINGQGQAWWKKYRQKL--------------------------------------LNNT 211
G +G G W + KL N
Sbjct: 165 GVFDGNGDTWRPTKKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVP 224
Query: 212 RGPLVQIMWS----------------SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
RG L W + +L+ T ++SP W LHP C+N+TI +S
Sbjct: 225 RGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVS 284
Query: 256 K--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC +I + GDD I IKSG D+ G G P N+++ N V
Sbjct: 285 NPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTV 344
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 52/316 (16%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTL 91
T+ T + LA A +++ G + + + P FN+ +G G L
Sbjct: 14 TVLTGIGLARLAKQ--GKKDKEANGMDHVLKQIKA---PMFPDREFNVIHYGADEKGEVL 68
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEK-Y 150
+T A Q A+ +L GG++ +P G +LT L SH+ L L ++A + ++ + Y
Sbjct: 69 STNAIQSAIDDAHRLK---GGRVVIPKGTFLTGALELKSHVELHLHENAYVTFSQDPRDY 125
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA--WWK-KY---- 203
PL+ L Y G E + + I+ + +++ ITG +GT++G+G WW KY
Sbjct: 126 LPLV--LTRY-EGIELY--NYSPLIYAHHAENMAITG-SGTLDGRGDEHHWWPWKYGTNG 179
Query: 204 -------RQKLLNNT-----------------RGPLVQIMWSSDILISNITLRDSPFWTL 239
RQ L R +Q +ILI +T++DSP W +
Sbjct: 180 QPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQPYQCQNILIEGVTVKDSPMWQI 239
Query: 240 HPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
HP C+NV +R I + +SC +++IEDCY GDD IAIKSG ++ G
Sbjct: 240 HPVLCENVIVRGVNIIGHGPNTDGVNPESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRI 299
Query: 294 GRPSMNILIRNLVVRS 309
G PS NI+IR +R
Sbjct: 300 GVPSENIVIRRNEMRD 315
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 71/300 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG DG+TLNT+A A I ++ KGGG++ +P G WLT P L
Sbjct: 54 PTFPDYSVNIIDFGAKPDGITLNTKAINDA---IQQVNAKGGGKVIIPEGLWLTGPIELL 110
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A +L + +P+ + + G E R S I +N +++ ITGH
Sbjct: 111 SNVNLYTEKNALVLFSADHSLYPI---INTSFEGLETR--RCQSPISARNAENIAITGH- 164
Query: 190 GTINGQGQAWWKKYRQKL--------------------------------------LNNT 211
G +G G W + KL N
Sbjct: 165 GVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVP 224
Query: 212 RGPLVQIMWS----------------SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
RG L W + +L+ T ++SP W LHP C+N+TI +S
Sbjct: 225 RGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVS 284
Query: 256 K--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC +I + GDD I IKSG D+ G G P N+++ N V
Sbjct: 285 NPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTV 344
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 130/271 (47%), Gaps = 47/271 (17%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ +G G+ L+TEA Q A+ +L GG++ +P G ++T L SH+ L L
Sbjct: 54 FNVVHYGADAQGIELSTEAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHL 110
Query: 137 ADDAEILAIENEK-YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ A + +N K Y PL+ L Y G E + + I+ + +++ ITG GT++G+
Sbjct: 111 HEKAYVSFSQNPKDYLPLV--LTRY-EGVELY--NYSPLIYAHHAENIAITG-AGTLDGR 164
Query: 196 GQA--WW------------KKYRQKLLNNT-----------------RGPLVQIMWSSDI 224
G WW ++ RQ L + R +Q +
Sbjct: 165 GDEHHWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQV 224
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDD 278
LI +T++DSP W +HP ++V +R I + +SC +++IEDCY GDD
Sbjct: 225 LIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IAIKSG ++ G G PS NI+IR +R
Sbjct: 285 CIAIKSGRNEDGRRIGIPSENIVIRRNEMRD 315
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ AF N+ FG GDG+ LNT+A A I + + GGG++ +P G WLT
Sbjct: 46 MPKVQQPAFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQHGGGKVIIPEGIWLT 102
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 103 GPIELLSNVNLYTERNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 157
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGP-------- 214
ITG+ GT +G G W WKK +Q++ T G
Sbjct: 158 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACK 216
Query: 215 ------------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
L+ I S IL+ +T ++SP W LHP C++ T+
Sbjct: 217 DFNVPEGINTDEEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVN 276
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKSG D+ G G P N++
Sbjct: 277 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVI 335
Query: 302 IRNLVV 307
++N V
Sbjct: 336 VKNNTV 341
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 67/282 (23%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ GG G+ T+A Q A I K K GGG + P G +LT L S++T+ L
Sbjct: 24 YNMLKEGGNNKGIKC-TQAIQNA---IEKASKNGGGTIFFPAGEYLTGALTLKSNITIHL 79
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A + EN + + P + + G + P F + ++++++ ITG G I+GQ
Sbjct: 80 DSGALLKFSENFDDFLPYV-EMRYEGIVMKSFQPLF----YAKDVENIAITGR-GIIDGQ 133
Query: 196 GQAWWKK-YRQKLLNNTRGPL----VQIMWSS---------------------------- 222
G+AWW + YR + + PL Q MW
Sbjct: 134 GKAWWNEVYR---IETAKEPLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAY 190
Query: 223 ---DILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFD------------SCEDMV 267
+ILI +T ++SPFWT++P C NV ++ I +F+ SC ++
Sbjct: 191 NCKNILIEGVTFKNSPFWTINPEFCDNVR-----VTGISIFNPHSPNTDGINPSSCTNVH 245
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I DC+ISVGDD I IKSG D G YG+ + N+ I N + S
Sbjct: 246 ISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLS 287
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G LNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKALNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + +I I + + +SPFWT++P C NVTI+ I +
Sbjct: 187 RRFFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDNVPSPNTDGINP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 80/306 (26%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ +F ++ ++G VGDG+T N++AF+ A+ +S +GGG++ VP G WLT
Sbjct: 38 MPKVKETSFPDFEKSIMEYGAVGDGLTNNSQAFKAAIEEVSN---QGGGKVLVPRGIWLT 94
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQN 179
P L ++ L L D + I +N+ +PL+ L ++ R S I+
Sbjct: 95 GPITLLDNVNLHLEDGSLITFSKNKDEYPLVETSFEGLNTF---------RCLSPINAYR 145
Query: 180 LKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---------------------------- 211
++++ ITG NGTI+G G+AW R K+ ++
Sbjct: 146 VENIAITG-NGTIDGSGEAWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNA 204
Query: 212 ----------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
R +V I S +L+ T ++SP W +HP ++V I
Sbjct: 205 SSSFNVPDVTDRKELEKMKDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVII 264
Query: 250 RNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
RN + +SC++++I + VGDDAI KSG D G G P+ N++
Sbjct: 265 RNLTVRNPWFSQNGDGLDLESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVI 324
Query: 302 IRNLVV 307
++N +V
Sbjct: 325 VKNNIV 330
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 40/266 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA-PFNL 128
P + ++TD+G VGDG T A + A++ + + GGG++ +PPG W +A P L
Sbjct: 47 PDIPARTVDVTDYGAVGDGSTDARPAIE---AALADMERAGGGRVVLPPGTWFSAGPIRL 103
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
SH+ L ++ A + E+ + +P +PS G E G + +H + DV +TG
Sbjct: 104 RSHVDLHVSSGATLRFSEDPADY--LPVVPSRWEGTEMFG--YSPLLHAHRVHDVAVTG- 158
Query: 189 NGTINGQGQ---AWWKKYR---QKLLNNT------------------RGPLVQIMWSSDI 224
G I+G + A W++ + Q+ L R ++Q SSD+
Sbjct: 159 GGLIDGNAEDGFAAWRELQGEDQQALRRMGKEGVPVEERVFGEGHYLRPSMLQFYESSDV 218
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ------LFDSCEDMVIEDC-YISVGD 277
L+ +T+ D+P W H ++T+R+ + + DS D+++E+ + +GD
Sbjct: 219 LVEGVTIVDAPMWVNHFIYSDDITVRDVTVKTHRPNNDGVAIDSSSDVLVENNDFQGIGD 278
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIR 303
D + +KSG D+ G GRPS NI++R
Sbjct: 279 DCVVVKSGRDEDGRRVGRPSENIVVR 304
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 52/283 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R + +TDFG +GDG T NT AF++A I K +GGG++ VP G +LT L
Sbjct: 44 PNFRKKDYLVTDFGAIGDGKTKNTGAFKKA---IEKCNVEGGGRVVVPKGIFLTGAIYLK 100
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L +++ A IL ++ +P++ + + S I+ +++ ITG
Sbjct: 101 SNVDLHISEGATILFSQDSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAITGK- 154
Query: 190 GTINGQGQA--WW-----KKY---------------------------RQKLLNN---TR 212
GT++G WW KKY R+++ + R
Sbjct: 155 GTLDGNSDNDHWWFWCGAKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLR 214
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI-RNAFIS---KIQLFD--SCEDM 266
VQ S + ++++ +++SP W L+P C+NV I R IS FD +C+++
Sbjct: 215 PNFVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVISHGPNNDGFDPEACKNV 274
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I+D Y GDD IAIKSG D+ G G+P+ N +I N ++
Sbjct: 275 WIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKD 317
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 70/291 (24%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA +A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+A I+ + +P++ R P I N++++ ITG+ G +G G
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSP-----ISAMNVENIAITGY-GVFDGAGD 169
Query: 198 AW------------WKKY---------------------RQKLLNNTRGP---------- 214
W WK + +L + +G
Sbjct: 170 RWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEW 229
Query: 215 ----------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SK 256
L+ I+ S +L+ +T ++SP W LHP C+++ + + +
Sbjct: 230 EEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGD 289
Query: 257 IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P N+++RN V
Sbjct: 290 ALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTV 340
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 26/251 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG GDGV +++ Q AV A K G + +P GR+L P L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKIDSVCIQAAVNACPK-----DGTVYIPKGRYLCTPVFLKSNIDLWI 137
Query: 137 ADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGPR--FGSFIHGQNLKDVVITG 187
DA ++ ++ K +P++P + Y G P F + I G ++++V+I G
Sbjct: 138 DKDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYG 197
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G ++G WWK ++K + R V + +I + + + +SP WTLHPY
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIA-WRPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
N+ N I +SCE+++I ISVGDD IAIKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPA 315
Query: 298 MNILIRNLVVR 308
NI+IRN + R
Sbjct: 316 KNIVIRNSIFR 326
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 135/281 (48%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P++ NL DFG GDG T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 21 PQIPDREVNLLDFGARGDGRTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + ++V ITG +
Sbjct: 78 SNIELHVKGTIKFIP-DPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-S 130
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 131 GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 190
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ + + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 191 SFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 250
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 291
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 68/297 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P ++ DFG DG TLNTEA A+ A+S+ KGGG++ +P G WLT P L
Sbjct: 51 PSFPDYQVDIRDFGAKADGETLNTEAINNAIKAVSE---KGGGKVVIPEGLWLTGPVVLQ 107
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+++ L + +A +L + +PL + + G + R S I N +++ ITGH
Sbjct: 108 NNVNLHVEKNALVLFSGDADLYPL---VRTSFEGLDML--RCQSPISAMNAENIAITGH- 161
Query: 190 GTINGQGQAWWKKYRQKLLNNT-------------------------------------- 211
G ++G G +W R K+ +
Sbjct: 162 GVLDGSGDSWRPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKRE 221
Query: 212 -------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
R L+ I+ S +L+ +T R+SP W LHP C+++T+ +
Sbjct: 222 ISDSEWEGMKRWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPW 281
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC+++V+ + GDDAI IKSG + G G P N+L++N V
Sbjct: 282 YSQNGDALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTV 338
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 135/281 (48%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P++ NL DFG GDG T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 21 PQIPDREVNLLDFGARGDGRTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 77
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + ++V ITG +
Sbjct: 78 SNIELHVKGTIKFIP-DPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-S 130
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 131 GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 190
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ + + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 191 SFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 250
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 291
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ +G DG LNTEA A+ A++ KGGG++ +P G WLT P L
Sbjct: 50 PTFPDYEVNIVAYGAKNDGKFLNTEAINNAIKAVNA---KGGGKVIIPEGLWLTGPIVLL 106
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A IL ++ + +P+ + + G E R S I +N +++ ITG+
Sbjct: 107 SNVNLYTERNALILFTDDFEAYPI---INTSFEGLETR--RCQSPISARNAENIAITGY- 160
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQ-------------------------------- 217
GT +G G +W + KL + G LV+
Sbjct: 161 GTFDGAGDSWRPVKKDKLTASQWGKLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPE 220
Query: 218 ---------------------IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
I+ S +L+ +T ++SP W LHP C+++T+ N +
Sbjct: 221 GINTDEEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFN 280
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + GDDAI IKSG D G G P N+L++N +V
Sbjct: 281 PWYSQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIV 339
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 135/281 (48%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P++ NL DFG GDG T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 19 PQIPDREVNLLDFGARGDGRTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + ++V ITG +
Sbjct: 76 SNIELHVKGTIKFIP-DPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-S 128
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 129 GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 188
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ + + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 189 SFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 248
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 249 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 289
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 68/297 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
PR NL +F VG+G TL T AF A+ A+S+ +GGG L VP G WLT P L
Sbjct: 53 PRFPDRTVNLKEFNAVGNGETLCTSAFADAINALSE---QGGGHLVVPAGVWLTGPIVLK 109
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A IL + +PL+ + R P I G+NL++V ITG
Sbjct: 110 SNIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTRRCQSP-----ISGRNLENVAITGE- 163
Query: 190 GTINGQGQAW------------WKK----------------YRQKLLNNT---------- 211
G I+G G W WK+ Y + L +T
Sbjct: 164 GAIDGNGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNL 223
Query: 212 -------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
R +V ++ ++ + + ++SP W LHP C+NV + + +
Sbjct: 224 KTEEEWQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPS 283
Query: 259 L--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + VGDD I +KSG D+ G RP N+++ V
Sbjct: 284 YAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTV 340
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 122/300 (40%), Gaps = 71/300 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG DG+TLNT+A A I ++ KGGG++ +P G WLT P L
Sbjct: 54 PTFPDYSVNIIDFGAKPDGITLNTKAINDA---IQQVNAKGGGKVIIPEGLWLTGPIELL 110
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ ++ +L + +P+ + + G E R S I +N +++ ITGH
Sbjct: 111 SNVNLYTEKNSLVLFSADHSLYPI---INTSFEGLETR--RCQSPISARNAENIAITGH- 164
Query: 190 GTINGQGQAWWKKYRQKL--------------------------------------LNNT 211
G +G G W + KL N
Sbjct: 165 GVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVP 224
Query: 212 RGPLVQIMWS----------------SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
RG L W + +L+ T ++SP W LHP C+N+TI +S
Sbjct: 225 RGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVS 284
Query: 256 K--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC +I + GDD I IKSG D+ G G P N+++ N V
Sbjct: 285 NPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTV 344
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 52/283 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + + +TD+G D +TEA ++A+ A GGG++ VP G +L+ P +L
Sbjct: 48 PTFKKVDYKITDYGASLDSTVKSTEAIRKAIEACHT---NGGGRVIVPKGTFLSGPIHLK 104
Query: 130 SHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L D A+IL + + Y PL+ + + I+ +++ ITG
Sbjct: 105 SNVNLHLEDGAKILFSRDVNDYKPLV-----FSRWEGMECMNYSPLIYAYEQENIAITG- 158
Query: 189 NGTINGQG--QAWW-----KKY--------------------------RQKLLNN---TR 212
NG ++G + WW K+Y R+++ + R
Sbjct: 159 NGILDGNANNEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHGDGSYLR 218
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDM 266
P +Q S ++LI+++ + ++PFW ++P C+NVT+RN + + +SC+++
Sbjct: 219 PPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVTHGPNNDGCDPESCKNV 278
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+I CY GDD IAIKSG ++ G RP+ N +I N ++
Sbjct: 279 LITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKD 321
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 70/291 (24%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA +A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+A I+ + +P++ R P I N +++ ITG+ G +G G
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSP-----ISAMNAENIAITGY-GVFDGAGD 169
Query: 198 AW------------WKKY---------------------RQKLLNNTRGP---------- 214
W WK + +L + +G
Sbjct: 170 RWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEW 229
Query: 215 ----------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SK 256
L+ I+ S +L+ +T ++SP W LHP C+++ + + +
Sbjct: 230 EEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGD 289
Query: 257 IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P N+++RN V
Sbjct: 290 ALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTV 340
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 70/291 (24%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA +A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 59 NICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAE 115
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+A I+ + +P++ R P I N +++ ITG+ G +G G
Sbjct: 116 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSP-----ISAMNAENIAITGY-GVFDGAGD 169
Query: 198 AW------------WKKY---------------------RQKLLNNTRGP---------- 214
W WK + +L + +G
Sbjct: 170 RWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEW 229
Query: 215 ----------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SK 256
L+ I+ S +L+ +T ++SP W LHP C+++ + + +
Sbjct: 230 EEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGD 289
Query: 257 IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P N+++RN V
Sbjct: 290 ALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTV 340
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 137/331 (41%), Gaps = 71/331 (21%)
Query: 36 VLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEA 95
LWL + ++ AV + L + + PR NL +F VG+G TL T A
Sbjct: 12 CLWLFSACQSADYKYEAV---YRNLPFDMPRVEAPRFPDRTVNLAEFNAVGNGETLCTSA 68
Query: 96 FQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMP 155
F A I+ L ++GGG L VP G WLT P L S++ L L A IL + +PL+
Sbjct: 69 FADA---INTLSEQGGGHLVVPAGVWLTGPIVLKSNIDLHLEKGAVILFSPDVDLYPLVE 125
Query: 156 PLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKK- 202
+ R P I G+NL++V ITG G I+G G W WK+
Sbjct: 126 TVFEGLDTRRCQSP-----ISGRNLENVAITGE-GAIDGNGHYWRPLKREKVTESVWKQT 179
Query: 203 ---------------YRQKLLNNT-----------------------RGPLVQIMWSSDI 224
Y + L +T R +V ++ ++
Sbjct: 180 TARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQTEEEWQSVRHFLRPVMVSLIECKNV 239
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVG 276
+ + ++SP W LHP C+NV + + + +SC++ +I + VG
Sbjct: 240 WLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGDGLDLESCKNALIVNSTFDVG 299
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD I +KSG D+ G RP N+++ V
Sbjct: 300 DDGICLKSGKDEDGRRRARPCENVVVDGCTV 330
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 27/266 (10%)
Query: 63 GVASRPIPRLRP--AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
G S R +P A N+ DFG VGDG ++T + Q A+ A GG++ P G
Sbjct: 68 GEKSTVFQRTKPETAYINVKDFGAVGDGKRIDTFSIQSAIMACPD-----GGRVYFPEGV 122
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMP-PLPSYGYGREHHGP-------RFG 172
+LT P L S++T+ L A +L + + +P++P + S + + G F
Sbjct: 123 YLTYPIFLKSNITIELGKGAVLLGAKEREMYPILPGEIDSQEFSNSYLGSWEGEANDMFA 182
Query: 173 SFIHGQNLKDVVITGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNIT 230
S I G ++++V I G +G I+G WW + K + R V + ++LI IT
Sbjct: 183 SLITGISVENVNIIG-DGVIDGNSSFDTWWYDAKVKRIA-WRPRTVYLNKCKNVLIEGIT 240
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAI 282
+R+SP WT+HP +N+ N I + +SC+D++I SVGDD IAI
Sbjct: 241 IRNSPSWTIHPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAI 300
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVR 308
KSG PS N+ IRN ++
Sbjct: 301 KSGKLSVSQKLPMPSENLYIRNCLME 326
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 44 SVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAI 103
S+F + V G + P R + LTDFGGVGDG T NT+ FQ A+ +
Sbjct: 111 SMFQDRECKVANGLDCFEY-----PAINCRKHSAVLTDFGGVGDGKTSNTKGFQYAISNL 165
Query: 104 SKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYG 163
S GG L VPPG+WLT FNLTSH TLFL +A IL ++E WP +P LPSYG G
Sbjct: 166 SHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPVLPSYGRG 225
Query: 164 RE 165
R+
Sbjct: 226 RD 227
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 69/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R FN+ +G DG+T+NT+A +A+ A GGG + VP G WLT P L
Sbjct: 264 PVFRKDTFNICRYGAKADGLTVNTKAISQAIEACHA---AGGGTVLVPAGLWLTGPIVLK 320
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+++ L +A +A + N +P+ + + G+E + R + I G +L ++ ITG
Sbjct: 321 NNVNLHIAKNALLQFSRNHDDYPI---VITTWEGQESY--RCQAPIWGVDLTNIGITGEG 375
Query: 190 -----------------------------GTINGQGQAWWKKYRQKLLNNT--------- 211
G ++ +G W+ + K NN
Sbjct: 376 VLDGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRILNG 435
Query: 212 ---------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
R ++ + ++L+ +T ++SP WT+HP C++V+IRN +
Sbjct: 436 IHPTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKN 495
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
S +SC + ++E C GDD I IKSG D+ G G P+ N +I++ V
Sbjct: 496 HWYAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKV 554
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 70/291 (24%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG DGVTLNTEA +A+ + KGGG++ +P G WLT P L S++ L
Sbjct: 53 NICDFGAKSDGVTLNTEAINKAIKVVHD---KGGGKVIIPEGLWLTGPIVLQSNVNLHAE 109
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+A I+ + +P++ R P I N +++ ITG+ G +G G
Sbjct: 110 KNALIVFSGDTSLYPIITTSFEGLDTRRCQSP-----ISAMNAENIAITGY-GVFDGAGD 163
Query: 198 AW------------WKKY---------------------RQKLLNNTRGP---------- 214
W WK + +L + +G
Sbjct: 164 RWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITSEEW 223
Query: 215 ----------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SK 256
L+ I+ S +L+ +T ++SP W LHP C+++ + + +
Sbjct: 224 EEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGD 283
Query: 257 IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P N+++RN V
Sbjct: 284 ALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTV 334
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 134/281 (47%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + NL DFG GD T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 19 PEIPDREVNLLDFGARGDERTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + K+V ITG +
Sbjct: 76 SNIELHVKGTIKFIP-DPERYLPVV--LTKF-EGIELYN--YSPLVYALDCKNVAITG-S 128
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 129 GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 188
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ ++ + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 189 SFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 248
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 249 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 289
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 57/291 (19%)
Query: 62 WGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
WG R + ++ P F +TDFG VGDG+ T+AF+R + A + GGG++ V
Sbjct: 18 WGQIQRILGQIIPPTFPRRDFVVTDFGAVGDGIMDCTDAFRRVMMAANT---AGGGRVVV 74
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
P G +LT P + S++ L+++ +A + + + EKY P++ L + G E + + I
Sbjct: 75 PAGIYLTGPIHFKSNVNLYVSKEATVKFSQDLEKYLPMV--LNRF-EGVELY--NYSPLI 129
Query: 176 HGQNLKDVVITGHNGTING-------------------QGQAWWKKYRQKLL-------- 208
+ ++ ITG G ++G +GQA + R L
Sbjct: 130 YSYGAVNIAITGE-GILDGNGDNEHWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVP 188
Query: 209 ---------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI----S 255
+ R +Q S +ILI IT++DSP W + P C+N+TI I
Sbjct: 189 VEERKFGSGHYLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVGHGP 248
Query: 256 KIQLF--DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
F DSC++++I++CY + GDD IAIKSG + G P NI+I+N
Sbjct: 249 NTDGFNPDSCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQN 299
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 51/275 (18%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R F +TDFG V + A ++A+ A ++ GGG++ VP G WLT +L S++
Sbjct: 50 RVKRFLITDFGAVAGDKEKISGAIRQAIDAANQ---AGGGKVVVPAGEWLTGKVHLKSNV 106
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L L A +L +EK +P + S G E + + I+ K+V ITG G +
Sbjct: 107 NLHLDKGAVLLF--SEKPEDYLPAVHSSWEGIECYN--YSPLIYAYQCKNVAITGE-GEV 161
Query: 193 NGQGQAWWKKY------------------------RQKLLNNT---RGPLVQIMWSSDIL 225
+ + W + + +++++N+T R +Q ++L
Sbjct: 162 RAKMEVWKEWFARPKPHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVL 221
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIEDCYIS 274
+ T+ +SPFWT+HPY CKNV I S+++++ + +++ I DC
Sbjct: 222 MEGFTVTNSPFWTIHPYLCKNVVI-----SRLKVYAHGHNNDGVDPEMSQNVFITDCVFD 276
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDDAIAIKSG + G PS NI+IRNL V++
Sbjct: 277 QGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKN 311
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 127/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G LNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKALNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I+ +
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 122/300 (40%), Gaps = 71/300 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG DG+TLNT+A A I ++ KGGG++ +P G WLT P L
Sbjct: 54 PTFPDYSVNIIDFGAKPDGITLNTKAINDA---IQQVNAKGGGKVIIPEGLWLTGPIELL 110
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A +L + +P+ + + G E R S I ++ +++ ITGH
Sbjct: 111 SNVNLYTEKNALVLFSADHSLYPI---INTSFEGLETR--RCQSPISARDAENIAITGH- 164
Query: 190 GTINGQGQAWWKKYRQKL--------------------------------------LNNT 211
G +G G W + KL N
Sbjct: 165 GVFDGNGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVP 224
Query: 212 RGPLVQIMWS----------------SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
RG L W + +L+ T ++SP W LHP C+N+TI +S
Sbjct: 225 RGELTDSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVS 284
Query: 256 K--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC +I + GDD I IKSG D+ G G P N+++ N V
Sbjct: 285 NPWYSQNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTV 344
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 67/282 (23%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ GG G+ T+A Q A I K K GGG + P G +LT L S++T+ L
Sbjct: 24 LNILKEGGNNKGIKC-TQAIQNA---IEKASKNGGGTIFFPAGEYLTGALTLRSNITIHL 79
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A + EN + + P + + G + P F + ++++++ ITG G I+GQ
Sbjct: 80 DSGALLKFSENFDDFLPYV-EMRYEGIVMKSFQPLF----YAKDVQNITITGR-GVIDGQ 133
Query: 196 GQAWWKK-YRQKLLNNTRGPL----VQIMWSS---------------------------- 222
G+AWW + YR + + PL Q MW
Sbjct: 134 GKAWWNEVYR---IETAKEPLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAY 190
Query: 223 ---DILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFD------------SCEDMV 267
+ILI +T ++SPFWT++P C NVT ++ I +F+ SC ++
Sbjct: 191 NCKNILIEGVTFQNSPFWTINPEFCDNVT-----VTGISIFNPHSPNTDGINPSSCTNVH 245
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I +C+ISVGDD I IKSG D G YG+ + N+ I N + S
Sbjct: 246 ISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLS 287
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDTENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 140/321 (43%), Gaps = 64/321 (19%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDG-VT 90
TL L+L FA W + + S +P+ +++T FG
Sbjct: 6 TLLVALFLPLFALAQSWDE-------AMYKQIEQSIRMPQFADREYSITQFGASPKASAA 58
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEK 149
N +A RA+ SK KGGG++ VP G WLT + SH+ L + + A + A E E
Sbjct: 59 KNQKAINRAILMCSK---KGGGRIVVPRGEWLTGAIRMQSHVNLVVEEGATLKFAFEPEL 115
Query: 150 YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWWK-----K 202
Y PL+ G G ++ P I+ DV +TG GTI+G G Q WW +
Sbjct: 116 Y-PLVK-TSWEGIGCWNYSP----CIYAYQATDVALTGK-GTIDGNGSKQTWWPMCGAPR 168
Query: 203 Y---------------RQKLLN-----------------NTRGPLVQIMWSSDILISNIT 230
Y R +LL R LV + S ILI ++
Sbjct: 169 YGFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQLVNFVESDGILIKDLH 228
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISVGDDAIAIKS 284
L +SPFW +HP KN+T+ F+ ++C+ ++I++C GDD IAIKS
Sbjct: 229 LVNSPFWVIHPLLSKNITVDGVFVQNDGPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKS 288
Query: 285 GWDQYGIAYGRPSMNILIRNL 305
G + G + +PS NI+IRN
Sbjct: 289 GRNNDGRLWNKPSQNIIIRNC 309
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 127/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G LNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKALNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I+ +
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 28 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 84
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 85 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 136
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 137 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQ 195
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 196 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 255
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 256 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 304
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 28 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 84
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 85 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 136
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 137 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQ 195
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 196 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 255
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 256 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 304
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 29 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 85
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 86 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 137
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 138 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQ 196
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 197 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 256
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 257 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 305
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 68/290 (23%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG +GVTLNTEA A+ A+ KGGG++ +P G WLT P L S++ L
Sbjct: 60 NICDFGAKSNGVTLNTEAINNAIKAVHD---KGGGKVVIPEGLWLTGPIVLQSNVNLHAE 116
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN-------- 189
+A I+ + +P+ + + G + R S I N +++ ITG+
Sbjct: 117 KNALIVFSSDTSLYPI---ITTSFEGLDVK--RCQSPISAMNAENIAITGYGVFDGAGDR 171
Query: 190 ---------------------GTINGQGQAWW---------------KKYRQKLLNNT-- 211
G ++ G+ W+ + R ++ +
Sbjct: 172 WRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITSEEWE 231
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKI 257
R L+ I+ S IL+ +T ++SP W LHP C+++ + + +
Sbjct: 232 DMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDA 291
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++++I +C+ GDDAI +KSG D+ G G P N+++RN V
Sbjct: 292 LDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTV 341
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 126/272 (46%), Gaps = 52/272 (19%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH-MTLFLA 137
L+DF DGV NTEAF A AI++ GG L++ PG W T P ++ H + + +
Sbjct: 6 LSDFEANNDGVFDNTEAFAAAFTAIAE-----GGCLSIGPGTWRTGPITISGHDIEVHIH 60
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
DA+I+ I E + +P Y + ++ N V I G GT+ G G
Sbjct: 61 KDAKIVFIPEEGKY-----IPVYSRWEGINCYCMHPCLYILNSHRVTIQGE-GTLYGSGH 114
Query: 198 AWWK----------------KYRQKLLNN----------------TRGPLVQIMWSSDIL 225
WW + R LLN R PLVQ+ SSDIL
Sbjct: 115 YWWDLSLGKRNLKMEPATETEKRFALLNPGYKSQGGGGGGRQSQFLRPPLVQVKDSSDIL 174
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGD 277
+ ITL DSPFWTLHP +N+ +N I + DSCE++ IE C I VGD
Sbjct: 175 LEGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDGIDLDSCENVTIEGCVIDVGD 234
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D IA+KSG GI GRP+ ++ I VR+
Sbjct: 235 DGIALKSGSGPDGILTGRPTKDVRIFQCTVRN 266
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 79/341 (23%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGG-FSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVT 90
T F++ L A +V +N++ + L + + P ++ FG DG T
Sbjct: 30 TTFSLALLPAQNAVHAQCKNSIDENIYKELPFNMPKVEQPSFPDYTVSILQFGAKSDGTT 89
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
LNT+A A+ A++ KGGG++ +P G WLT P L S++ L +A ++ ++
Sbjct: 90 LNTKAINDAIKAVNA---KGGGKVVIPEGLWLTGPIELLSNVNLHTEKNALVVFTDDFNA 146
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--- 207
+P++ R P I +N +++ ITG+ G +G G +W + KL
Sbjct: 147 YPILETSFEGLNTRRCQSP-----ISARNAENIAITGY-GVFDGSGDSWRPVKKSKLTAG 200
Query: 208 --------------------------------LNNTRG----------------PLVQIM 219
NN G L+ I+
Sbjct: 201 QWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEEWNEIRPWLRPVLLNIV 260
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------------DSCEDM 266
S +L+ +T ++SP W LHP C+++TI +++++F +SC++
Sbjct: 261 KSKRVLLEGVTFKNSPSWCLHPLSCEHITI-----NQVKVFNPWYSQNGDALDLESCKNA 315
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+I + GDDAI IKSG D+ G G P N++++N V
Sbjct: 316 LIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTV 356
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 21/241 (8%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ D+G V DG TL A AI GGG + VP G +LT L S++ L +
Sbjct: 4 YNIVDYGAVQDGTTL---ATGAIASAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHV 60
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + +P++ G RE H S I+G+NL+++ +TG +GT++G G
Sbjct: 61 SPGATLSFSTELADYPVVESRWE-GVQREVHA----SCIYGENLENISVTG-SGTLDGNG 114
Query: 197 QAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
Q WW+K+R + L R L+ + I ++ L++SP WT++P C NVTI N I
Sbjct: 115 QPWWQKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSI 174
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
+SC ++ I +C I VGDD IAIK+G + P NI I N
Sbjct: 175 LNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCT 232
Query: 307 V 307
+
Sbjct: 233 M 233
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 134/281 (47%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + NL DFG GD T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 19 PEIPNREVNLLDFGARGDERTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + K+V ITG +
Sbjct: 76 SNIELHVKGTIKFIP-DPERYLPVV--LTRF-EGIELYN--YSPLVYALDCKNVAITG-S 128
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 129 GVLDGSADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 188
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ ++ + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 189 SFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 248
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 249 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 289
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 77/302 (25%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + N+ DFG V G LNT+AF A+ A+SK KGGG++ +PPG WLT P L
Sbjct: 48 PLIPKNTVNIKDFGAVNGGYVLNTKAFADAIDAVSK---KGGGKVVIPPGIWLTGPIILK 104
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
S++ L A I ++ +PL+ L ++ R S I+G+NL+++
Sbjct: 105 SNLELHAETGALIKFSTDKSLYPLVETSFEGLNTW---------RCISPIYGKNLENIAF 155
Query: 186 TGHNGTINGQGQAW------------WKKYRQK--LLNNT-------------------- 211
TG G +G G+ W WKK+ +LN
Sbjct: 156 TGK-GVWDGSGEVWRQVKKSKLTESQWKKFVASGGVLNEKKESWYPSETFMKASVGADQN 214
Query: 212 ------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYD-----CKNVT 248
R LV I S ++ ++SP W +HP +NVT
Sbjct: 215 VRLDLKTKEEFEAIHDFLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVT 274
Query: 249 IRNAFISKIQ---LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+RN + S+ +SC+++++E+ VGDDAI IKSG D+ G G P NI+++N
Sbjct: 275 VRNPWFSQNGDGLDVESCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNN 334
Query: 306 VV 307
+V
Sbjct: 335 IV 336
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 68/297 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+ NL DFG +GDG +L T AF +A+ A+++ KGGG+L VP G W T P L
Sbjct: 42 PQFPANEVNLKDFGAIGDGSSLCTTAFAKAIDALTQ---KGGGKLIVPQGVWFTGPIVLK 98
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A IL ++ +P + R P I G +L +V ITG
Sbjct: 99 SNINLHLEKGAVILFSPDDALYPFIETSFEGLDTRRCQSP-----ISGHHLTNVAITGQ- 152
Query: 190 GTINGQGQAWWKKYRQKL-----------------------------------LNNTRGP 214
G I+G G+ W +QK+ +N + P
Sbjct: 153 GCIDGNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTP 212
Query: 215 LVQIMWSS----------------DILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
+ W+ ++ ++ + ++SP W +HP C+NV I + +
Sbjct: 213 ASEEEWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPS 272
Query: 259 L--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + VGDD I IKSG D G G P N+++ V
Sbjct: 273 YAQNGDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTV 329
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 63/287 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G LNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKALNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I+ +
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITINNVPSPNTDGINP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC ++ I DC+ISVGDD I IKSG D G P NI I N +
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTM 293
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 77/306 (25%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+++ AF N+ FG GDG+ LNT+A A I + + GGG++ +P G WLT
Sbjct: 46 MPKVQQPAFPAYEVNIEKFGAKGDGLFLNTKAINDA---IKDVNQHGGGKVIIPEGIWLT 102
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L+ +A +L + + +P+ + + G E R S I +N +++
Sbjct: 103 GPIELLSNVNLYTERNALVLFTGDFEAYPI---IATSFEGLETR--RCQSPISARNAENI 157
Query: 184 VITGHNGTINGQGQAW------------WKKY---------RQKLLNNTRGPL------- 215
ITG+ GT +G G W WKK +Q++ T G L
Sbjct: 158 AITGY-GTFDGNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACK 216
Query: 216 -------------------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ I+ S IL+ +T ++SP W LHP C++ T+
Sbjct: 217 DFNVPEGINTDEEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVN 276
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I L +SC++ +I + GDDAI IKS D+ G G P N++
Sbjct: 277 NIMVINPWYSQNGDAIDL-ESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVI 335
Query: 302 IRNLVV 307
++N V
Sbjct: 336 VKNNTV 341
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 128/304 (42%), Gaps = 67/304 (22%)
Query: 57 FSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
FS +G+A L+ ++ G DG TLNT + + +L + GGG L
Sbjct: 9 FSVFCFGMAIT----LKAERVDMLKSGAKADGKTLNTTLIN---HTVDRLSQAGGGTLFF 61
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF- 174
P G +LT L S++TL L A +L +N + Y P M H G SF
Sbjct: 62 PAGTYLTGAIRLKSNITLELEAGATLLFSDNFDDYLPFMEV--------RHEGVMMKSFS 113
Query: 175 --IHGQNLKDVVITGHNGTINGQGQAWW------------------KKYR---------Q 205
I + +++ I G GT++GQG+AWW KY+ +
Sbjct: 114 PLISAMDAENITIKGE-GTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVE 172
Query: 206 KLLNNT-------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
L T R P +Q + + I + + +SPFWT++P C NV +
Sbjct: 173 ALYAETNEDWHGTLKRRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGV 232
Query: 253 FISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
I + +SC ++ I DC+ISVGDD I +KSG D G P NI I N
Sbjct: 233 TIHNVPSPNTDGINPESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNC 292
Query: 306 VVRS 309
+ S
Sbjct: 293 TMLS 296
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G TLNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKAGAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGIYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN----------------------------------NT-- 211
GT++GQG+ WW ++ + +++ NT
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQ 186
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I
Sbjct: 187 RRFFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 50/277 (18%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A+N+ DFG D T + ++ AI+ ++GGG + +P G + T P + S++ L
Sbjct: 62 AYNIKDFGATTD--TPDQPCHEQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNLH 119
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L + A + ++K + P + + G + + R + +G++ ++ ITG GTI+GQ
Sbjct: 120 LEEGATLKFSTDQKLY--FPGVITRWEGLDCYNARPLIYAYGES--NIAITGK-GTIDGQ 174
Query: 196 G--QAWWKKY------------------RQKLL-----------------NNTRGPLVQI 218
G + WW R++L+ + R L+
Sbjct: 175 GSNETWWPMCGAAHYGWKEGMHSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINF 234
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCY 272
+ ILI ++TL +SPFW +HP C+++ +R I +SC++++IE+C
Sbjct: 235 YLCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYNRGPNGDGCDPESCKNVLIENCR 294
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG ++ G + RPS NI++RN +++
Sbjct: 295 FDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKN 331
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 52/242 (21%)
Query: 111 GGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGRE---HH 167
GG++ +P G W T P L S +T LA+ + ++ I +E L P+ S G H
Sbjct: 34 GGEVLIPSGTWHTGPVTLASGITFRLAEGSRLVFIPDED---LYVPVYSRWEGVSCWCMH 90
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQK----------------LLNNT 211
F S H DV +TG G I+G G++WW+ R+K LN
Sbjct: 91 PCLFISESH-----DVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPG 144
Query: 212 ----------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI- 254
R PL+QI+ S+ + + +TL SPFWTLHP +T R+ I
Sbjct: 145 YADQPGGGGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKII 204
Query: 255 -------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ DSC+D+++ C + VGDD IA+KSG GIA GRP+ N+ + V
Sbjct: 205 NPADAPNTDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTV 264
Query: 308 RS 309
RS
Sbjct: 265 RS 266
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 120/288 (41%), Gaps = 68/288 (23%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
L DFG VG+GV L T+AF +A I L +GGG L VP G WLT P L S++ L +
Sbjct: 51 LPDFGAVGNGVELCTDAFAKA---IETLSARGGGYLIVPAGIWLTGPIVLKSNINLHIEK 107
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A IL + + +PL+ + R P I G+NL +V ITG G I+G G
Sbjct: 108 GAVILFSPDVELYPLVETVFEGLDTRRCQSP-----ISGRNLTNVAITGQ-GAIDGNGHY 161
Query: 199 W----------------------------WKKYRQKLLNNT------------------- 211
W W Y Q L +T
Sbjct: 162 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 221
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------- 259
R +V ++ ++ + ++SP W LHP C+NV I + +
Sbjct: 222 RHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLD 281
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + VGDD I +KSG D+ G RP N+++ V
Sbjct: 282 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTV 329
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 125/243 (51%), Gaps = 25/243 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ D+G V DG + TEA A+ A S GGG + VP G +LT L S++ L +
Sbjct: 4 YNIVDYGAVQDGTKMATEAIAAAIEAASN---AGGGTVFVPAGTYLTGAIFLKSNIELHV 60
Query: 137 ADDAEILAIENEKYWPLMPPLPS--YGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A IL+ E P + S G RE H S I+G+NL+++ ITG +GT++G
Sbjct: 61 SPGA-ILSFSTE--LADYPVVESRWEGVQREVHA----SCIYGENLENISITG-SGTLDG 112
Query: 195 QGQAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
GQ WW+K+R + L R L+ + I ++ L++SP WT++P C NVTI N
Sbjct: 113 NGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNL 172
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I +SC ++ I +C I VGDD IAIK+G + P NI I N
Sbjct: 173 SILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITN 230
Query: 305 LVV 307
+
Sbjct: 231 CTM 233
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 45/268 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+T +G D L T+A ++A+ A +K+G GG + P G++LT P +L S++T+F+
Sbjct: 27 FNVTKYGAKNDSSRLATDAIKKAIDAAAKVG---GGTVYFPAGKYLTGPIHLKSNITIFI 83
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
AE+ +N ++ +P +PS G E F + ++++++ I G G I+G G
Sbjct: 84 DAGAELHFSDNFDHY--LPMVPSRWEGTEV--INFSPLFYAKDVENIAIVGR-GLIDGHG 138
Query: 197 QAWWKKYR---QKLLNNT---------------------------RGPLVQIMWSSDILI 226
+ WW+ +KL ++ R P +Q M ++ I
Sbjct: 139 KNWWRFSEVEVKKLTEDSKWQKEFKRLNPNVLAPDLPGWIERGFLRPPFIQFMNCKNVQI 198
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDA 279
+I +++SPFWT++P C NVT+ I +SC ++ I +C+ISVGDD
Sbjct: 199 KDIKIQNSPFWTINPQYCDNVTVDGITIDNPPSPNTDGINPESCRNVRIANCHISVGDDC 258
Query: 280 IAIKSGWDQYGIAYGRPSMNILIRNLVV 307
I IKSG D+ G P+ N I N +
Sbjct: 259 ITIKSGKDRSGRKVNIPAENYTITNCTM 286
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 126/252 (50%), Gaps = 25/252 (9%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DFG VGDG L+T + Q A+ A GG++ P G +LT P L S++T+
Sbjct: 82 AYINVKDFGAVGDGKRLDTFSIQAAIMACPD-----GGRVYFPEGVYLTYPIFLKSNITI 136
Query: 135 FLADDAEILAIENEKYWPLMP-PLPSYGYGREHHGP-------RFGSFIHGQNLKDVVIT 186
L A +L + + +P++P + S + + G F S I G ++++V I
Sbjct: 137 ELGKGAVLLGAKGREMYPILPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNII 196
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G +G I+G WW+ + K + R V + ++LI IT+++SP WT+HP
Sbjct: 197 G-DGIIDGNSSFDTWWQDAKVKRI-AWRPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMS 254
Query: 245 KNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
+N+ N I + +SC+D++I SVGDD IAIKSG P
Sbjct: 255 QNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMP 314
Query: 297 SMNILIRNLVVR 308
S N++IRN ++
Sbjct: 315 SENLIIRNCLME 326
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 124/289 (42%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++ G +G LNT+ I +L + GGG L P G +LT L S+
Sbjct: 12 LHAERVDMLKIGAKANGKVLNTKLIN---TTIDRLNRNGGGTLFFPAGTYLTGSIRLKSN 68
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 69 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 120
Query: 188 HNGTINGQGQAWWKKYRQKLL--------------------NNT---------------- 211
GT++GQG+ WW ++ + ++ N+T
Sbjct: 121 E-GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVSTLQ 179
Query: 212 ----RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
R P +Q + + I + + +SPFWT++P C NVTI+ I +
Sbjct: 180 RRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITIDNVPSPNTDGINP 239
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 240 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 288
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 52/285 (18%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P FN+ D+G V DG T N++A + A+ A + G GG++ VP G+++T P +L
Sbjct: 43 VPNFPDKNFNIKDYGAVNDGETNNSKAIKDAIKACNDAG---GGKVIVPKGKYVTGPIHL 99
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L + AEIL +++K + +P + + G E + I+ K++ +TG
Sbjct: 100 LSNVNFHLEEGAEILFTKDKKAY--LPVVHTSYEGVELM--NYSPLIYAYKQKNIAVTGK 155
Query: 189 NGTINGQG--QAWW-----KKY----------------RQKLLNNTRGPLVQIMW----- 220
GT NGQ WW ++Y R + +N P+ + ++
Sbjct: 156 -GTFNGQAGKDNWWPWCGAERYGHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQ 214
Query: 221 ----------SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCE----- 264
+IL+ ++T ++PFW +HP N+T+ + S D C+
Sbjct: 215 LRPTFFEPFECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRSHGPNNDGCDPEYSK 274
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
++ I++C GDD IAIKSG + G PS NI++ N ++
Sbjct: 275 NVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKD 319
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 50/283 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P F++ ++G G L+T+A A+ A ++ GGG++ VP G +LT +L
Sbjct: 51 VPEFPDQEFSIEEYGAEAGGEVLSTDAIAAAIKACNE---AGGGRVVVPKGVYLTGAVHL 107
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L + A + N K + +P + S G E + FI+ +++ ITG
Sbjct: 108 LSNVNLHLEEGATLRFSRNPKDY--LPLVRSRWEGMELM--NYSPFIYAYQQENIAITG- 162
Query: 189 NGTINGQG--QAWW----------------KKYRQKLLN---NTRGPL------------ 215
NGT++G + WW + +KLL+ + R PL
Sbjct: 163 NGTLDGHADMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMR 222
Query: 216 ---VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDM 266
VQ ++LI ++ L ++P W LHP C+NVT+ I + ++C+++
Sbjct: 223 PQFVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKIETLGPNNDGCDPEACKNV 282
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+I+DCY GDD IAIKSG ++ G G PS NI+I ++
Sbjct: 283 LIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKE 325
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 123/284 (43%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
F++ G G+ TE R I K +GGG + P G +LTA ++ S++TL+
Sbjct: 21 TFDMKQLGADAKGIKSCTELINRT---IEKAASEGGGTIYFPVGTYLTATIHMKSNITLY 77
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L A + + + E Y P + L G + P I+ + +V I+G GT++G
Sbjct: 78 LESGAVLRFSDKFEDYLPFVT-LRWEGTVMKSLSP----LIYAHSADNVTISGR-GTLDG 131
Query: 195 QGQAWW--------------------KKYRQKLLNNT------------------RGPLV 216
G WW K +Q ++ R P +
Sbjct: 132 NGLKWWLWEFDTRKVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRMFRPPFI 191
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q ++ILI N+ + +SPFWT++P C NVTI I+ SC +
Sbjct: 192 QFYECTNILIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRN 251
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+ NI I N ++ S
Sbjct: 252 VRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS 295
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 30/244 (12%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N +G GDGV+ +T A Q +AI K+GGG + + PG +L+AP L S++TL L
Sbjct: 34 NPHSYGAKGDGVSKDTAAIQ---HAIDACAKRGGGTVLLTPGTYLSAPIVLKSNITLKLE 90
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A +L + +P + E P S I QN ++ I G GTING G
Sbjct: 91 KGATLLGSPDFNDYPAI---------TEFRAPGRQSLISAQNASNITIEG-AGTINGNGA 140
Query: 198 AWWKKYRQKLLNN------TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
+WWK R+ TR L+ +++ +T+ +SP W + PY +V IRN
Sbjct: 141 SWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRN 200
Query: 252 AFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ I F S ++IE +VGDD IAIKSG + PS I I
Sbjct: 201 IHVLAPQHAPNTDAIDPFSSSH-VLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYITI 258
Query: 303 RNLV 306
R+ +
Sbjct: 259 RDCI 262
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 61/291 (20%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + ++T FG DG+TLNTEA + + A SK +GGG + +P G WLT P L
Sbjct: 32 LPTFKKDTLSITQFGAKSDGLTLNTEAINKTIEACSK---QGGGVVLIPQGIWLTGPIVL 88
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L+++ A I ++ +PL + +Y G++ R + I G +L++V ITG
Sbjct: 89 KSNVNLYVSRAALIQFTADKTQYPL---IETYFEGKK--AVRNQAPISGTDLENVAITG- 142
Query: 189 NGTINGQGQAW------------WKKYRQK------------------LLNNTRGP---- 214
+G I+G G W WKK +GP
Sbjct: 143 DGVIDGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDY 202
Query: 215 ----------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCE 264
+V + +L+ N T ++SP W LH C+ +T+ + + + +
Sbjct: 203 AAIKDYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGD 262
Query: 265 DMVIEDC-YISV-------GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
M IE C Y+ V GDD I IKSG D+ G G+ S I I + VV
Sbjct: 263 GMDIESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVV 313
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+N+ D+G DG TL A AI GGG + VP G +LT L S++ L
Sbjct: 26 VYNIVDYGAPQDGTTL---ATGAIAAAIEAASNAGGGTVFVPSGTYLTGAIFLKSNIELH 82
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L+ A + + +P++ G RE H S I+GQNL+++ +TG +GT++G
Sbjct: 83 LSPGAILSFSTDLVDYPVVESRWE-GVQREVHA----SCIYGQNLENISVTG-SGTLDGN 136
Query: 196 GQAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
GQ WW+K+R+ + L R L+ + I ++ L++SP WT++P C NVTI N
Sbjct: 137 GQPWWEKHRKHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVS 196
Query: 254 ISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
I +SC ++ I +C I VGDD IAIK+G + P NI I N
Sbjct: 197 ILNPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNC 254
Query: 306 VV 307
+
Sbjct: 255 TM 256
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 53/281 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P++ NL DFG GD T +E+F+RA I +L K+GGG+L VP G +LT P +L
Sbjct: 19 PQIPDREVNLLDFGARGDRRTDCSESFKRA---IEELSKQGGGRLIVPEGVFLTGPIHLK 75
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + + + + E+Y P++ L + G E + + ++ + ++V ITG +
Sbjct: 76 SNIELHVKGTIKFIP-DPERYLPVV--LTRF-EGIELYN--YSPLVYALDCENVAITG-S 128
Query: 190 GTINGQG--QAWW---------------------KKYRQKLLNNT-------------RG 213
G ++G + WW KK ++ T R
Sbjct: 129 GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRP 188
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMV 267
VQ ++L+ + + +SP W +HP +NV IRN IS +SC+ M+
Sbjct: 189 SFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 248
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR-NLVV 307
IE C GDD++ IKSG D G G PS IL+R NLV+
Sbjct: 249 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVI 289
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 51/257 (19%)
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENE 148
V + +A Q+A I + + GGG++ +P G W T L SH+ L L A + I N+
Sbjct: 78 VLFHGQAIQQA---IDDMAQAGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNK 134
Query: 149 K--YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW----WK- 201
++PL Y F FI+ + +D+ ITG GT++GQ + WK
Sbjct: 135 SNVFYPL-----RYTRWEGVECMNFSPFIYAEGAEDISITGQ-GTLDGQADEFNWMPWKF 188
Query: 202 ---------KYRQKL------------------LNNTRGPLVQIMWSSDILISNITLRDS 234
+ RQ+L ++ R P +Q S DI I + + +S
Sbjct: 189 GYFGEPDQEEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNS 248
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWD 287
PFW ++P C+NV I+ I + L+ +S +++IEDCY GDD IAIKSG +
Sbjct: 249 PFWEINPVLCENVWIKGVHI-ETDLYNNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRN 307
Query: 288 QYGIAYGRPSMNILIRN 304
+ G G P+ N++IR+
Sbjct: 308 EDGRRIGVPTANVIIRH 324
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 65/332 (19%)
Query: 29 SHKTLFTVLWLAAFASVFIW-----QRNAVVGG----FSFLRWGVASRPI--PRLRPAAF 77
S + +F ++ +A A VF++ NA+ G F R + I P+ R A +
Sbjct: 10 SARFVFPMVLMAFSALVFLYACSAASNNAIAIGSTDSFPMERMLELEKSIKEPKFRDANY 69
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +G V DG T+ TE+ ++A+ A S K GGG++ VP G++L+ P +L +++ L L
Sbjct: 70 NIVSYGAVADGKTMATESIRKAILACS---KDGGGKVIVPSGKFLSGPIHLENNVNLHLM 126
Query: 138 DDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ AEIL N + ++PL+ G ++ P I+ +N K++ +TG G +NGQ
Sbjct: 127 EGAEILFSTNPDDFYPLV-HTSFEGMELMNYSP----LIYAKNKKNIAVTGK-GILNGQA 180
Query: 197 --QAWWK-----------------------KYRQKLLNNT-------------RGPLVQI 218
WW K + N R ++
Sbjct: 181 SNDNWWTWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNGRYLRPNFIEP 240
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMVIEDCY 272
++LI IT+ ++PFW LHP KN+ + I + ++++I++
Sbjct: 241 FECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRSHGPNNDGLDPEYSQNVLIKNSI 300
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+ GDD IAIK+G D+ G G + NI++R+
Sbjct: 301 FNTGDDCIAIKAGRDEEGRRVGIMTENIIVRD 332
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 47/278 (16%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+ FN+ +G G+ L+T A Q A+ +L GG++ +P G +LT L
Sbjct: 47 PKFPDREFNVIHYGADNKGIELSTNAIQSAIDDAHRLK---GGRVLIPEGTFLTGALELK 103
Query: 130 SHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L ++A + + + Y PL+ L Y G E + + I+ + +++ ITG
Sbjct: 104 SNVELHLHENAYVSFSQDTRDYLPLV--LTRY-EGIELY--NYSPLIYAHHAENIAITG- 157
Query: 189 NGTINGQGQA--WWK-KY-----------RQKLLNNT-----------------RGPLVQ 217
GT++G+G WW KY RQ L R +Q
Sbjct: 158 AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVFGEGHYLRSSFIQ 217
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDC 271
+ILI +T++DSP W +HP +NV +R I + +SC ++IEDC
Sbjct: 218 PYNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIGHGPNTDGVNPESCRHVLIEDC 277
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
Y GDD IAIKSG ++ G G PS NI+IR +R
Sbjct: 278 YFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRD 315
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 47/271 (17%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ +G G L+T+A Q A+ +L GG++ +P G ++T L SH+ L L
Sbjct: 54 FNVVHYGADAKGTELSTDAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHL 110
Query: 137 ADDAEILAIENEK-YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ A + +N K Y PL+ L Y G E + + I+ + +++ ITG GT++G+
Sbjct: 111 HEKAYVAFSQNRKDYLPLV--LTRY-EGVELY--NYSPLIYAHHAENIAITG-AGTLDGR 164
Query: 196 GQA--WWK-KY-----------RQKLLNNT-----------------RGPLVQIMWSSDI 224
G WW KY RQ L + R +Q +
Sbjct: 165 GDEHHWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVFGEGHYLRSSFIQPYQCQQV 224
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDD 278
LI +T++DSP W +HP + V +R I + +SC +++IEDCY GDD
Sbjct: 225 LIEGVTVKDSPMWQIHPVLSELVIVRGVHIIGHGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IAIKSG ++ G G PS NI+IR +R
Sbjct: 285 CIAIKSGRNEDGRRIGIPSENIVIRRNEMRD 315
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 26/252 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG GDGV ++ Q A+ A K G + +P G++L P L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDLWI 137
Query: 137 ADDAEILAIENEKYWPLMPPLP-------SYGYGREHHGP--RFGSFIHGQNLKDVVITG 187
DA ++ ++ K +P++P + Y G P F + I G ++++V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G ++G WWK ++K + R V + +I + + + +SP WTLHPY
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIA-WRPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSD 255
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
N+ N I +SCE+++I ISVGDD +AIKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 298 MNILIRNLVVRS 309
NI+IRN + R
Sbjct: 316 KNIVIRNSIFRK 327
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 48/305 (15%)
Query: 27 LSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVG 86
L + KT + V A F S I Q +AV+ A+RP + F +T+FG V
Sbjct: 21 LEASKT-YEVYVCAVFQSGEISQPSAVIK--------AATRP----QADRFEITEFGAVA 67
Query: 87 DGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE 146
DG T+NTEA Q A+ A + GG++ VP G ++T L S MTL++ +L +
Sbjct: 68 DGQTINTEAIQAAIDACT-----AGGKVVVPKGTFVTGAIFLKSRMTLYIEQGGVLLGSD 122
Query: 147 NEKYWPLMPPLPSYGY-GREHHGPRFGSFIHGQN-----LKDVVITGHNGTINGQGQAWW 200
N +P+M Y + GRE + S I+ ++ L+ ++I G G I+ G A +
Sbjct: 123 NPDDYPVM----QYRWEGREQLC--YASLINTKDPAEGRLEQIIIEGE-GKIDANGMALF 175
Query: 201 KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ-- 258
K + RG V + + + +IT+R SP W +H C V++ + I +
Sbjct: 176 HKEMAEK-KGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDE 234
Query: 259 -------LF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+F DS D+ I + I+ DD IAIKSG ++ G G PS NI I N
Sbjct: 235 QGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISN 294
Query: 305 LVVRS 309
+S
Sbjct: 295 CTFKS 299
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A+N+ D+G DG T TEA A+ A S GGG + +P G +LT S++ L
Sbjct: 54 AYNIVDYGAPQDGKTPATEAIANAIEAASN---AGGGTVVIPSGTYLTGAIFFKSNIELH 110
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L+ A + N +P++ G RE H S I+GQNL+++ +TG +G + G
Sbjct: 111 LSPGAILSFSTNPADYPVVESRWE-GVQREVHA----SCIYGQNLENISVTG-SGILEGN 164
Query: 196 GQAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
GQ WW+K+R + L R L+ + I +I L++SP WT++P C NVTI N
Sbjct: 165 GQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNLS 224
Query: 254 ISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWD 287
I +SC ++ I +C I VGDD IAIK+G +
Sbjct: 225 ILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTE 266
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 127/256 (49%), Gaps = 33/256 (12%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DFG VGDGVT++T A Q A+ A K G ++ +P G + P L SHMTL
Sbjct: 78 AILNVKDFGAVGDGVTMDTAAIQAAIMAAPK-----GSRVVIPAGTYKILPLFLKSHMTL 132
Query: 135 FLADDAEILAIENEKYWPLMP-----PLPSYGYGREHHGPR---FGSFIHGQNLKDVVIT 186
L + A +LA + K +P++P S Y G + S I G ++DV I
Sbjct: 133 ELLEGATLLAHTDRKDYPILPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRII 192
Query: 187 GHNGTINGQGQ--AWWKKYRQKLLNNTRGP----LVQIMWSSDILISNITLRDSPFWTLH 240
G GTI+G GQ WW + K RG + ++ D+++ IT+++SP WT+H
Sbjct: 193 GQ-GTIDGNGQNADWWVDCKVK-----RGAWRPRSLYLVDCEDVVVEGITIKNSPSWTVH 246
Query: 241 PYDCK-----NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P N+T+ N S D SC + I S+GDD IAIKSG +
Sbjct: 247 PVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVD 306
Query: 293 YGRPSMNILIRNLVVR 308
RPS NI+IRN ++
Sbjct: 307 MRRPSENIIIRNCLME 322
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FN+ + G G+ TE + I K +GGG + P G +LTA ++ S++TL+
Sbjct: 21 TFNMKELGADPRGIESCTELINQT---IEKASSEGGGTIYFPAGVYLTATIHMKSNITLY 77
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + + E Y P + + G P I+ + +++ ITG GT+NG
Sbjct: 78 VESGAVLRFSDRFEDYLPFVK-IRWEGTVMNTLSP----LIYAHDAENLTITGR-GTLNG 131
Query: 195 QGQAWW---KKYRQKLLNNT-----------------------------------RGPLV 216
G WW K+ R+ + N R P +
Sbjct: 132 NGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFI 191
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q +++LI N+ + +SPFWT++P C NVT+ I SC +
Sbjct: 192 QFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRN 251
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+ NI I N V+ S
Sbjct: 252 VRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS 295
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FN+ + G G+ TE + I K +GGG + P G +LTA ++ S++TL+
Sbjct: 21 TFNMKELGADPRGIESCTELINQT---IEKASSEGGGTIYFPAGVYLTATIHMKSNITLY 77
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + + E Y P + + G P I+ + +++ ITG GT+NG
Sbjct: 78 VESGAVLRFSDRFEDYLPFVK-IRWEGTVMNTLSP----LIYAHDAENLTITGR-GTLNG 131
Query: 195 QGQAWW---KKYRQKLLNNT-----------------------------------RGPLV 216
G WW K+ R+ + N R P +
Sbjct: 132 NGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERRMFRPPFI 191
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q +++LI N+ + +SPFWT++P C NVT+ I SC +
Sbjct: 192 QFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRN 251
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+ NI I N V+ S
Sbjct: 252 VRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS 295
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 14/179 (7%)
Query: 140 AEILAIENEKYWPLMPPLPSYGYGRE----HHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
EI+A NE + +MP LPSY R+ + S +G+ +++VV TG G ING+
Sbjct: 7 CEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLINGE 65
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G+ WW + Q L R L Q ++ + I +T ++SPFWT+H +N+ I + I
Sbjct: 66 GENWWTRNSQNL-KFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAIL 124
Query: 256 KIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
DS ++ I D +I VGDD IA+KSG+D G +G P+ N+L+ N V
Sbjct: 125 AEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVENSV 183
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 28/258 (10%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+L A N+ DFG VGDG +NT Q A+ G+ + +P G +LT P L S
Sbjct: 78 KLESAVVNILDFGAVGDGNHVNTAFIQAAIQVCPAFGR-----VIIPKGTYLTGPLFLKS 132
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSY-------GYGREHHGPRFGSFIHGQNLKDV 183
++TL L + + +L ++ +++P++ S G + F S I N+++V
Sbjct: 133 NITLELEEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAINVENV 192
Query: 184 VITGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
I G GTI+G WW K ++K + R + + +IL+ +T+++SP WT+HP
Sbjct: 193 NIIGK-GTIDGNSDFDTWWFKAKEKRI-AWRPRTLFLNACKNILVEGVTIKNSPSWTIHP 250
Query: 242 YDCK-----NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
N++I N F + D SC++++I SVGDD IAIKSG + I+
Sbjct: 251 LMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISK 308
Query: 294 GRP--SMNILIRNLVVRS 309
P S NI IRN +RS
Sbjct: 309 KNPVSSENINIRNCNMRS 326
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 127/265 (47%), Gaps = 43/265 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ ++G V G T+NT+A +A+ A +K GGG++ +P G WLT P +L S++ L+L
Sbjct: 55 FSIANYGAVKGGKTINTKAIAKAIKACNK---AGGGRVVIPAGEWLTGPVHLMSNVNLYL 111
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+D A + +N + + +P + + G E + + ++ + ++V ITG GT+
Sbjct: 112 SDGAILRFTDNPEDY--LPAVMTSWEGMECY--NYSPLVYAFDCENVAITG-TGTLQPIM 166
Query: 197 QAWWKKYRQ---------------------------KLLNNTRGPLVQIMWSSDILISNI 229
W K +++ K NN R L+ ++L+
Sbjct: 167 DTWRKWFKRPKPHMDALAELYTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKNVLLDQF 226
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFI-------SKIQLFDSCEDMVIEDCYISVGDDAIAI 282
+R+SPFWT+H Y C +RN + + L + + +IEDC GDDA+ I
Sbjct: 227 KIRESPFWTIHLYMCDGGIVRNLDVYAHGHNNDGVDL-EMSRNFLIEDCKFDQGDDAVVI 285
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVV 307
K+G +Q P NI+IRN +
Sbjct: 286 KAGRNQDAWRLDTPCENIVIRNCDI 310
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 52/279 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P F++TDFG + N ++ + AI+ GGG++ +P G WLT +L
Sbjct: 42 PEFPARDFSITDFGA-----SPNADSTEAIAKAITACHAAGGGRVTIPAGVWLTGAVHLL 96
Query: 130 SHMTLFLADDAEILAI-ENEKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLKDVVITG 187
++ L LA +A + + E KY P++ L Y G ++ P ++ ++V ITG
Sbjct: 97 GNVDLHLAKEATLRFVPEPAKYLPVV--LTRYEGIECMNYSP----LVYAFEQENVAITG 150
Query: 188 HNGTINGQG--QAWW-----------------KKYRQKLLNNT-------------RGPL 215
GT++G Q WW K+ Q+ + T R
Sbjct: 151 A-GTLDGSASSQNWWAWNERAPDKPALQAADRKQLDQQGADGTPVAQRIFGAGHFLRPSF 209
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIE 269
++ ++LI +T+ +SP W +HP C NVT+R + + +SC D++IE
Sbjct: 210 IEPYRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSLGTNNDGCDPESCHDVLIE 269
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DC GDD IAIKSG + G G + NI+IR ++
Sbjct: 270 DCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMK 308
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 122/278 (43%), Gaps = 63/278 (22%)
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI 142
G +G TLNT+ I +L + GGG L P G +LT +L S++TL L A +
Sbjct: 5 GAKANGKTLNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 143 LAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQA 198
L +N + Y P + H G SF I+ + +++ I G GT++GQG+
Sbjct: 62 LFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKGE-GTLDGQGKK 112
Query: 199 WWKKYRQKLLN----------------------------------NT------RGPLVQI 218
WW ++ + +++ NT R P +Q
Sbjct: 113 WWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQP 172
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDC 271
+ + I + + +SPFWT++P C NVTI+ I +SC ++ I DC
Sbjct: 173 VRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPSPNTDGVNPESCRNVHISDC 232
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ISVGDD I IKSG D G P NI I N + S
Sbjct: 233 HISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 270
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 25/247 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDG+ L+T A Q ++ A G++ VP GR+L P L S++T+
Sbjct: 55 VLNVKDFGAKGDGLELDTAAVQASIAACPL-----HGRIIVPKGRYLLTPIFLKSNITIE 109
Query: 136 LADDAEILAIENEKYWPLMPPL------PSYGYGREHHGPR--FGSFIHGQNLKDVVITG 187
L + A +L ++ +P++P L Y G P F S I G N+++V I G
Sbjct: 110 LEEGAVLLGAQDRNKYPILPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVENVNIIG 169
Query: 188 HNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
NG I+G WW + ++K + R ++ ++ +IL+ ++T+++SP WT+HP +
Sbjct: 170 -NGIIDGNASIDNWWFEAKKKRI-AWRPRMIFLVGCKNILVESVTVKNSPSWTIHPLMSE 227
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
++ N +I + +SC+++ I SVGDD IAIKSG PS
Sbjct: 228 DLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPS 287
Query: 298 MNILIRN 304
+I IRN
Sbjct: 288 QHIYIRN 294
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 29/244 (11%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG GDG TL T + Q+A+ + LG GG++ +P GR+LT +L S +TL L
Sbjct: 50 LNVRDFGATGDGSTLETASLQQALDRCNVLG---GGEVLIPAGRYLTGGLSLRSRVTLRL 106
Query: 137 ADDAEILAIENEKYWPLMPP------LPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
DA +L + ++P+ +P Y + +H + +++ I G G
Sbjct: 107 DKDATLLGSPDLAHYPVAQVRWEGKWIPGYT-----------ALLHALDARNIAIVGE-G 154
Query: 191 TINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I G + + L R L++ + + + I+ + W++HP C N+ R
Sbjct: 155 KIEGNEAVAGRPTKDNPLR--RPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFR 212
Query: 251 NAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
N I + DSC ++I+ C I+ GDD I++KSG + RP+ ++ I N
Sbjct: 213 NLTIRSTKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITN 272
Query: 305 LVVR 308
+
Sbjct: 273 CTLE 276
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 139/305 (45%), Gaps = 76/305 (24%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ +F ++ + G V DGVT NTEAF +A+ A++ KGGG++ VP G WLT
Sbjct: 47 MPKVELTSFPNFTLSILEHGAVSDGVTKNTEAFAKAIDAVAS---KGGGKVLVPRGIWLT 103
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P S++ L L A IL ++ +PL+ S+ + R S I+ ++++
Sbjct: 104 GPIQFKSNINLHLEAGALILFSKDFDDYPLIE--TSF---EGLNTVRCISPIYADGVENI 158
Query: 184 VITGHNGTINGQGQAWWKKYRQKL-------------LNNTRGP---------------- 214
ITG GT++G G AW + K+ L N +G
Sbjct: 159 AITG-TGTLDGNGDAWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASS 217
Query: 215 -----------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
+V I S IL+ T ++SP W +HP +++ IRN
Sbjct: 218 NFNVPDLIDPSELETVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRN 277
Query: 252 AFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
+ + L +SC++++I D VGDDAI KSG DQ G G P+ N+++
Sbjct: 278 LNVRNPWYSQNGDGLDL-ESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVV 336
Query: 303 RNLVV 307
+N +V
Sbjct: 337 KNNIV 341
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 129/301 (42%), Gaps = 68/301 (22%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
S +P + ++D+G VG+GV NT F +A+ A +K GGG + +PPG W T P
Sbjct: 10 SPDLPLIPEHTVTISDYGAVGNGVYDNTRVFHQAIEACAK---AGGGTVVIPPGIWRTGP 66
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
L S + L + A ++ K++ P L S GR+ R S + G+ L+DV I
Sbjct: 67 IKLQSRIELHASAGALVVF---SKFFEDYPLLMSTYEGRQMF--RCQSPLDGEGLEDVAI 121
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNT---------------------------------- 211
TG +G +G G+AW + KL +
Sbjct: 122 TG-SGIFDGSGEAWRPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIE 180
Query: 212 -----------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
R L+ + IL+S T ++S W LHP+ + +TI+N +
Sbjct: 181 QTGSEEPQDYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITV 240
Query: 255 SKI--------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
DSC+ + +E+ VGDDAI +KSG ++ G G+PS I IRN
Sbjct: 241 RNPWYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCT 300
Query: 307 V 307
V
Sbjct: 301 V 301
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 127/297 (42%), Gaps = 67/297 (22%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P FN+ DFG +GDG++ NTEAF A+ A + +GGG + +P G WLT P L
Sbjct: 21 LPVFPDGTFNIADFGAIGDGLSDNTEAFAAAIEACA---SQGGGTVLIPAGLWLTGPIRL 77
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L A + N +PL+ SY R R I+G++L++V ITG
Sbjct: 78 QSGIRLHADAGALVHFSANRDDYPLI--RTSYEGLRT---VRCMPAIYGEDLENVAITG- 131
Query: 189 NGTINGQGQAW------------WKKYRQK-------------------------LLNNT 211
G +G G+AW WK+ Q + N
Sbjct: 132 TGIFDGSGEAWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQNV 191
Query: 212 RGP-------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI- 257
+ P LVQ+ +L T R+SP W +HP+ C++VTIRN I
Sbjct: 192 QDPSAFEPARDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQW 251
Query: 258 -------QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DSC I D VGDDAI IKSG D G A P+ + IRN V
Sbjct: 252 HSQNGDGLDLDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQV 308
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P ++ FG DG LNT+A A+ A+ KGGG++ +P G WLT P L
Sbjct: 50 PAFPDYTISIVAFGAQNDGKFLNTKAINEAIKAVHA---KGGGKVVIPEGLWLTGPIELL 106
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L+ +A IL ++ + +P+ + + G E R S I +N +++ ITG+
Sbjct: 107 SNVNLYTERNAMILFTDDFEAYPI---IETSFEGLETR--RCQSPISARNAENIAITGY- 160
Query: 190 GTINGQGQA-------------WWKKYRQKLLNNTRGP---------------------- 214
GT +G G + W K + + + G
Sbjct: 161 GTFDGSGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPE 220
Query: 215 ------------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-- 254
L+ I+ S +L+ +T ++SP W LHP C+++TI N +
Sbjct: 221 GINTDEEWDEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFN 280
Query: 255 ------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC++ +I + GDDAI IKSG D+ G G P N+L++N V
Sbjct: 281 PWYSQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTV 339
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 137/306 (44%), Gaps = 75/306 (24%)
Query: 64 VASRP-IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL 122
V RP IP L LTDFGG GDGVTLN+EAF++A I L KGGG+L VP G WL
Sbjct: 38 VIERPVIPDLNIC---LTDFGGSGDGVTLNSEAFEKA---IQYLASKGGGRLIVPQGVWL 91
Query: 123 TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
T P L +++ L L+D++ ++ +++ +P++ + G P+ S + N
Sbjct: 92 TGPIELENNVELHLSDNSIVVFSQDKSLYPIVETVFE-GCKTFRCKPQL-SAVRKSN--- 146
Query: 183 VVITGHNGTINGQGQAW------------WKK---------------------YR----- 204
V +TG G I+G G W W + YR
Sbjct: 147 VAVTGK-GIIDGAGDIWRLGKKNEMPPMVWNECIQSGGILSEDGELWYPTESYYRGAKDA 205
Query: 205 --------------QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+ + + R +V +L+ I ++SP W +H +++ +
Sbjct: 206 IQNIVPWAKTMEDFESVRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVH 265
Query: 251 NAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
N + I + +SC ++++ D + VGDDAI IKSG D+ G G P+ NI+
Sbjct: 266 NIAVRCPWYAKNGDGIDI-ESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNII 324
Query: 302 IRNLVV 307
+ N V
Sbjct: 325 VDNCVC 330
>gi|317046607|ref|YP_004114255.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316948224|gb|ADU67699.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 443
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 27/246 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG TL+T FQRA + L ++GGG L VPPGR+ L SH+ L L
Sbjct: 3 LSLADFHPVADGETLDTACFQRA---LDHLTQRGGGTLTVPPGRYRLGTLTLGSHLKLHL 59
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A A +LA + E Y + S +H ++ +++ I+G G I+G
Sbjct: 60 AAGATLLASQRVEDYQHCLA--QSQAELSQH------VLLYAVGQRNISISG-KGVIDGD 110
Query: 196 GQAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV---- 247
G+AW+ + +L R ++ + + T+ +P WT+H C++V
Sbjct: 111 GEAWFAAEKDAQGYRLPRPQRPRIIVFEDCEQVTLQEFTIVQAPMWTVHLVSCRHVHVEH 170
Query: 248 -TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
TI NA + DSCE + + + Y+S DDAI IK+ Q R + I+I
Sbjct: 171 LTIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--TQKPTHLRRAARQIMIS 228
Query: 304 NLVVRS 309
N +RS
Sbjct: 229 NCQLRS 234
>gi|238006852|gb|ACR34461.1| unknown [Zea mays]
Length = 187
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL-NVPPGRWLTA 124
S P PR R A ++ FG GDG TLNT AF RAV I++ GG L VPPG WLT
Sbjct: 34 SGPAPR-RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTG 92
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
PFNLTSHMTLFLA A + A ++ WPL+ PLPSYG GRE G R+ S IHG L+DV
Sbjct: 93 PFNLTSHMTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVF 152
Query: 185 ITG 187
ITG
Sbjct: 153 ITG 155
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 26/251 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG GDGV ++ Q A+ A K G + +P G++L P L S++ L++
Sbjct: 83 LNVKDFGAAGDGVKTDSVCIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDLWI 137
Query: 137 ADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGP--RFGSFIHGQNLKDVVITG 187
DA ++ ++ K +P++P + Y G P F + I G ++++V+I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFG 197
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G ++G WWK ++K + R V + +I + + + +SP WT+HPY
Sbjct: 198 E-GILDGNAGMLDWWKDAKKKNIA-WRPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
N+ N I +SCE+++I ISVGDD +AIKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 298 MNILIRNLVVR 308
NI+IRN + R
Sbjct: 316 KNIVIRNSIFR 326
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 127/294 (43%), Gaps = 66/294 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+ + + +TDFG GDG NTEAF +A +K +GGG + VP G W T P L
Sbjct: 41 PKFQETEYLITDFGAKGDGQFKNTEAFHKA---FAKAFSQGGGTVVVPEGIWYTGPITLK 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A IL + +PL+ SY R S I+ K++ ITG
Sbjct: 98 SNINLHLKQGALILFSDQFDDYPLVE--TSY---EGLKSARSTSPINALGAKNIAITGK- 151
Query: 190 GTINGQGQAWWKKYRQKLLNNT-------------------------------------- 211
G I+G G AW + K+ +
Sbjct: 152 GIIDGNGGAWRPVKKSKMTQHQWNALVASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIE 211
Query: 212 ---------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK------ 256
R +V ++ +IL+ T ++SP W +HP KN+ +RN +
Sbjct: 212 QLQTVRSFLRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQN 271
Query: 257 ---IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ L +SCE++++ + VGDDAI IKSG ++ G P+ N++I+N V
Sbjct: 272 GDGLDL-ESCENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTV 324
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAV-YAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+N+TDFG D TE A+ AI K GGG + VP G + T P L S++
Sbjct: 47 TYNITDFGAKPDN---ETEPCHEAINQAILKCSLAGGGTVVVPQGTFYTGPITLKSNVNF 103
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + + N+ + P + + G + + R + +G+ ++ ITG GTI+G
Sbjct: 104 HLQEGAILKFLTNQSLY--FPGVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDG 158
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 159 QGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ S +LI ++TL +SPFW +HP C+++ +R + +F +SC+++
Sbjct: 219 LYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRG-----VNIFNRGPNGDGCDPESCKNV 273
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG + G + PS NI++RN +++
Sbjct: 274 LIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKN 316
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 129/302 (42%), Gaps = 74/302 (24%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P ++TD+ V G+ NT A +A+ +SKLG GG +NVP G WLT P L
Sbjct: 8 LPVFPDRQVSITDYKAVSGGIESNTAAINQAITELSKLG---GGTVNVPEGIWLTGPITL 64
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF--IHGQNLKDVVIT 186
S++ L L A I +N + +P++ L +Y PR + IH + +++ IT
Sbjct: 65 KSNINLHLEKGALITFDKNPEEYPII--LTNY-----EGQPRLRAVSPIHAFDEENIAIT 117
Query: 187 GHNGTINGQG----------------QAWWKK-------------------YRQKLLNNT 211
G G I+G G QA KK Y L
Sbjct: 118 GE-GVIDGNGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEV 176
Query: 212 ------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
R + ++ + ILI +TL++SP W LHP C N+T+RNAF
Sbjct: 177 SVEDPDALKKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAF 236
Query: 254 ISKIQLFDSCEDMVIEDC--------YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
I + + + +E C VGDDAI IKSG + G P+ ++ IR+
Sbjct: 237 IRNANFAQNGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDC 296
Query: 306 VV 307
VV
Sbjct: 297 VV 298
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 43/263 (16%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ D+G + D +L+T A Q A+ + G G++ +PPG + +AP + T LA
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAALDDCAGEG----GEVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ AE+ +++ + P + S G + G F +H + ++V ITG G I+G G
Sbjct: 62 NGAELRFVQD---FTEFPTVESRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGS 115
Query: 198 AWWK-------KYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRD 233
WW+ +Y +L R PL+QI ++ +S +TLR+
Sbjct: 116 YWWEFVSLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 234 SPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSG 285
SPFW H +VTI + I DS + + D +I GDDAI +KSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 286 WDQYGIAYGRPSMNILIRNLVVR 308
D+ G GRP+ N+++ N V
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVE 258
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FN+ + G G+ TE + I K +GGG + P G +LTA ++ S++TL+
Sbjct: 21 TFNMKELGADPRGIESCTELINQT---IEKASSEGGGTIYFPAGVYLTATIHMKSNITLY 77
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + + E Y P + + G P I+ + +++ ITG GT++G
Sbjct: 78 VESGAVLRFSDRFEDYLPFVK-IRWEGTVMNTLSP----LIYAHDAENLTITGR-GTLDG 131
Query: 195 QGQAWW---KKYRQKLLNNT-----------------------------------RGPLV 216
G WW K+ R+ + N R P +
Sbjct: 132 NGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFI 191
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q +++LI N+ + +SPFWT++P C NVT+ I SC +
Sbjct: 192 QFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRN 251
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+ NI I N V+ S
Sbjct: 252 VRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS 295
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 62 WGVASRPIPRLRPAA-FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR 120
+GV S P +TD+G + T ++A AI K K GGG + +P G
Sbjct: 37 FGVVSVESPNFSSCERLPITDYGALQGNQTATSKAI---TTAIEKAHKLGGGIVVIPAGE 93
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
WLT +L S++ L L A +L EN + +P + S G E + + I+
Sbjct: 94 WLTGKIHLKSNVNLHLDKGALLLFSENPADY--LPAVHSSWEGMECYN--YSPLIYAYEC 149
Query: 181 KDVVITGHNGTINGQGQAWWKKY------------------------RQKLLNNT---RG 213
K++ ITG G I + W + +++++N+T R
Sbjct: 150 KNIAITGQ-GEIKAKMDVWETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRP 208
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMV 267
+Q S ++L+ I++ +SPFWT+H Y KN+ IRN + + ++++
Sbjct: 209 QFIQFNRSENVLLEGISITNSPFWTIHTYLSKNIIIRNLNVYAHGHNNDGVDPEMSQNVL 268
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IE+C GDDAIAIKSG + G PS NI+IRN V++
Sbjct: 269 IENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCTVKN 310
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A+N+ D+G DG T TEA A+ A S GGG + +P G + T L S++ L
Sbjct: 3 AYNIVDYGAPQDGTTPATEAIANAIEAASN---AGGGTVVIPSGTYFTGAIFLKSNIELH 59
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
++ A + N +P++ G RE H S I+GQNL+++ +TG +G + G
Sbjct: 60 VSPGAILSFSTNPADYPVVESRWE-GVQREVHA----SCIYGQNLENISVTG-SGILEGN 113
Query: 196 GQAWWKKYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
GQ WW+K+R + L R L+ + I ++ L++SP WT++P C NVTI N
Sbjct: 114 GQPWWEKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLS 173
Query: 254 ISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWD 287
I +SC ++ I +C I VGDD IAIK+G +
Sbjct: 174 ILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTE 215
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 83/308 (26%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+PR+ F ++ DFG VGDGV N++AF +A+ +S+ KGGG++ VP G WLT
Sbjct: 50 MPRVEEPVFPDYAVSIVDFGAVGDGVFDNSDAFAQAIDNVSE---KGGGRVVVPRGLWLT 106
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQN 179
P + S++ L L D A + + +PL+ L +Y R S +H
Sbjct: 107 GPIIMKSNIDLHLEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHG 157
Query: 180 LKDVVITGHNGTINGQGQAW------------WKKYR----------------------- 204
L+++ TG NG +G G AW WKK
Sbjct: 158 LENIAFTG-NGIFDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGD 216
Query: 205 ----------------QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+K+ + R +V I +L+ T ++SP W +HP +++
Sbjct: 217 SRDNFNVPDLKTKEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDII 276
Query: 249 IRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
IRN + + L +SC++++I + VGDDAI KSG ++ G G P+ N
Sbjct: 277 IRNLTVRNPWYSQNGDGLDL-ESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTEN 335
Query: 300 ILIRNLVV 307
++++N VV
Sbjct: 336 VIVKNNVV 343
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 38/260 (14%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A F++ FG GDG +T A RA+ A +K G GG + V PGR+LT L S++TL
Sbjct: 20 AEFDVKTFGAAGDGKKKDTAAIARAIDAAAKAG---GGTVVVSPGRYLTGALTLKSNVTL 76
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A +L + + +PL + +G +E + S I+ + I G GTI+G
Sbjct: 77 DVEAGATLLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRGR-GTIDG 128
Query: 195 QGQAWWKKY----RQKL---------------LNNTRGPLVQIMWSSDILISNITLRDSP 235
QGQAWWK+ R+K+ L R +++++ S ++I + L +S
Sbjct: 129 QGQAWWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSA 188
Query: 236 FWTLHPYDCK-----NVTIRNAFISKIQLF---DSCEDMVIEDCYISVGDDAIAIKSGWD 287
WT++P C+ +TI N S +SC ++ I + I VGDD + +KSG D
Sbjct: 189 SWTVNPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKD 248
Query: 288 QYGIAYGRPSMNILIRNLVV 307
+ G GRP NI I N V+
Sbjct: 249 EAGRRVGRPDENITITNCVM 268
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 49/274 (17%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ +G V DG +L+T A A+ A K GGG++ VP G +LT +L S++ L L
Sbjct: 53 FDIQHYGAVADGQSLSTGAINSAIIACHK---AGGGRVLVPAGHYLTGAVHLLSNVELHL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING-- 194
A++A + + + +P + + G E+ G + I+ +++ ITG G ++G
Sbjct: 110 AENARLSFSRDPNDY--LPAVFTRWEGVEYMG--YSPLIYAYQAENIGITG-TGVLDGSA 164
Query: 195 --------QGQAWWKKYRQKLLNNTRG-------------------------PLVQIMWS 221
+G + W + +N+R P +Q
Sbjct: 165 SEMHWWPWKGTSEWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQC 224
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISV 275
++L+ ++T+ ++PFW +HP C NVT R + + +SC +++IE C+
Sbjct: 225 RNVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQSLGPNSDGCNPESCRNVLIEHCFFDT 284
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG + G PS NI+IR+ +R+
Sbjct: 285 GDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRA 318
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 8/119 (6%)
Query: 199 WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
WW K+ +K N TR +++IM+S I ISN+TL +SP W +HP N+TI+ I
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 255 ----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC + IEDCYI GDD +A+KSGWD+YGI +G+P+ +++IR L S
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCIS 120
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 43/263 (16%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ D+G + D +L+T A Q A+ + G G++ +PPG + +AP + T LA
Sbjct: 7 NVRDYG-IDDDDSLDTAAIQAALDDCAGEG----GEVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ AE+ +++ + P + S G + G F +H + +V ITG G I+G G
Sbjct: 62 NGAELRFVQD---FTEFPTVESRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 115
Query: 198 AWWK-------KYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRD 233
WW+ +Y +L R PL+QI ++ +S +TLR+
Sbjct: 116 YWWEFVSLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 234 SPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSG 285
SPFW H +VTI + I DS + + D +I GDDAI +KSG
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSG 235
Query: 286 WDQYGIAYGRPSMNILIRNLVVR 308
D+ G GRP+ N+++ N V
Sbjct: 236 KDEQGREVGRPTENVVVTNCTVE 258
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 26/250 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
++ FG +GDG +T Q A+ A K G + +P GR+LT P L S ++L+L
Sbjct: 84 LDVRAFGALGDGKNDDTACIQAAIEACPK-----DGTVRIPKGRYLTRPLFLRSGLSLWL 138
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGRE-------HHGPR--FGSFIHGQNLKDVVITG 187
A +L + +++P +P + G+ P + S + G L++V I G
Sbjct: 139 DRGAVLLGDPSREHYPRLPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNVDIFG 198
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
GT++G WW++++ K R + + I I + +R+SP WT+HPY
Sbjct: 199 E-GTVDGNADRSDWWEEHKTKR-GAWRPRTIFLCRCRCIRIQGVLVRNSPSWTIHPYYTD 256
Query: 246 NVTIRNAFI------SKIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
+++ N I FD SCED+++ C ISVGDD IAIKSG + + S
Sbjct: 257 GISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGERRKAS 316
Query: 298 MNILIRNLVV 307
N +RN ++
Sbjct: 317 RNFALRNSIL 326
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 41/280 (14%)
Query: 58 SFLRWGVASRPIPRLRPAA------FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGG 111
S + G S+P +++ + F++T+FG V DG T+NTEA Q A+ A + G
Sbjct: 76 SVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTINTEAIQAAIDACT-----AG 130
Query: 112 GQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY-GREHHGPR 170
G++ VP G ++T L S MTL++ +L +N +P+M Y + GRE
Sbjct: 131 GKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDYPVM----QYRWEGREQLC-- 184
Query: 171 FGSFIHGQN-----LKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDIL 225
+ S I+ ++ L+ ++I G G I+ G A + K + RG V + +
Sbjct: 185 YASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAEK-KGFRGRAVCLRNVDGVY 242
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ---------LF-------DSCEDMVIE 269
+ +IT+R SP W +H C V++ + I + +F DS D+ I
Sbjct: 243 LKDITVRQSPAWCVHLIYCNGVSVNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIF 302
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I+ DD IAIKSG ++ G G PS NI I N + +S
Sbjct: 303 NSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCIFKS 342
>gi|217073342|gb|ACJ85030.1| unknown [Medicago truncatula]
Length = 137
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+ ++RP + ++T+FG VGDG+TLNT+AFQ A++ ++ KGG +L VP GRWLT F+L
Sbjct: 35 LDKVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDL 94
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPS 159
SH+TL+L DA IL N + WP++ PLPS
Sbjct: 95 ISHLTLWLDKDAIILGSTNSEDWPVVDPLPS 125
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 42/269 (15%)
Query: 68 PIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL 122
P+P+L F ++ D G V G T NT A AI+ + GGG++ VP GRWL
Sbjct: 40 PMPQLARPTFPARVEDIRDHGAVPGGKTKNTAA---FAQAIAACAEAGGGRVLVPAGRWL 96
Query: 123 TAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
T P +L S++ L LA DAE++ + E Y P++ L G G E + + FI+ ++
Sbjct: 97 TGPIHLRSNIELHLAQDAEVIFSDRFEDYLPVV--LVRVG-GIELYN--YSPFIYARDCT 151
Query: 182 DVVITGHNGTINGQGQAWWK-----------------KYRQKLLNN----TRGPLVQIMW 220
+V ITG G +NG Q WW Q++ R V
Sbjct: 152 NVAITGP-GRLNGNSQRWWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFN 210
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYIS 274
++L+ T+ P WT+HP +N+ IR + + DSC +++IE C
Sbjct: 211 CRNVLMEGFTIGGGPNWTIHPVYSENIIIRRVHVLTEGPNNDGIDPDSCRNVLIEHCVFD 270
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
GDD + +KSG+++ G RP+ N+++R
Sbjct: 271 TGDDCVVLKSGYNEDGWRVARPTENVVMR 299
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 52/290 (17%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
VA P + F + +FG V DGV ++A Q+A I +GGG + G +LT
Sbjct: 48 VARTQAPSIPSDRFVVENFGAVSDGVFDCSDAIQKA---IEHAESQGGGTVVFTQGVYLT 104
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P +L S + L L DA + + + + +P + + G E G F I+ L DV
Sbjct: 105 GPIHLRSKIALHLEKDATLKFVTDPNRY--LPAVFTRWEGMELMG--FSPLIYAYGLNDV 160
Query: 184 VITGHNGTING--QGQAWW----------------------KKY-----------RQKLL 208
ITG GT++G Q WW + Y R+++
Sbjct: 161 AITGQ-GTLDGGANDQTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVF 219
Query: 209 NN---TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQL 259
+ R P +Q IL+ I + ++PFW +HP ++VTIR S
Sbjct: 220 ADGGFLRPPFLQFYDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQSYGPNSDGCD 279
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SCE +VIEDC GDD IA+KSG + G G P +++++N ++
Sbjct: 280 PESCERVVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKE 329
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 33/259 (12%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
+ FN+T+FG GDG+TL++ A QR + A +K GG + G +L+ + S +
Sbjct: 28 KSKTFNVTNFGAKGDGITLDSPAIQRTIDAAAK----SGGTVVFRAGTYLSGSIFVKSGV 83
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
TL + IL + +PLMP + G E P + ++ K+ ITG GTI
Sbjct: 84 TLRVDKGVTILGSQKISDYPLMPTRVA---GIEMTWP--AALVNIYEQKNAEITGE-GTI 137
Query: 193 NGQGQAWW-------KKYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+G G+ +W K Y + + ++ R L+Q+ SS + +S + LR S FWT+
Sbjct: 138 DGDGKVFWDGYWSLRKDYDTRGIRWAADYDSKRPRLIQVFNSSQVKLSGLMLRRSGFWTV 197
Query: 240 HPYDCKNVTIRNAFISKIQ----------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQY 289
H +VT+ I + DS + ++++ I+V DDA+ +K+G D
Sbjct: 198 HICYSHDVTLDGLTIRNNEGGRGPSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRDSD 257
Query: 290 GIAYGRPSMNILIRNLVVR 308
G+ RP+ +I++R+ V+R
Sbjct: 258 GLRVNRPTEDIVLRDSVIR 276
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 68/298 (22%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +TD+G VGDGV NT AF +A+ A +K GGG++ +PPG W T P L
Sbjct: 12 LPVIPEYTVMITDYGAVGDGVYDNTLAFHQAIEACAK---AGGGKVVIPPGIWHTGPLTL 68
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L + A ++ + + +P+ + +Y GR+ R S + G+ L+D+ TG
Sbjct: 69 QSRIELHASAGALVMFSKQFEAYPIR--MSAY-EGRQMF--RCQSPLDGEGLEDIAFTG- 122
Query: 189 NGTINGQGQAWWKKYRQKLLNN-------------------------------------- 210
+G +G G+AW + KL +
Sbjct: 123 SGIFDGGGEAWRPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQTG 182
Query: 211 TRGP-------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--- 254
+R P L+ + IL++ T ++S W LHP+ + +TI+N +
Sbjct: 183 SRNPQDYEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNP 242
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DSC+ + +E+ VGDDAI +KSG ++ G G+PS I IRN V
Sbjct: 243 WYAQNGDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTV 300
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 125/289 (43%), Gaps = 59/289 (20%)
Query: 65 ASRPIP-RLRPA-----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPP 118
A P+P RPA + ++ FGG GDG LNTEAF+ A+ A +K GGG++ VPP
Sbjct: 26 AKDPVPIEPRPAVIPQRSVSILQFGGKGDGKALNTEAFRAAIQACAK---AGGGRVVVPP 82
Query: 119 GRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQ 178
G + T P L SH+ L + A I A + + L PLP+ + + I G
Sbjct: 83 GTFRTGPIELASHVALIVEKGAIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGT 142
Query: 179 NLKDVVITGHNGTINGQGQAWWKKYR---------------------------------- 204
L D+ I G G I+G G WW K
Sbjct: 143 KLDDIAIAGE-GIIDGAGSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPP 201
Query: 205 QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---------S 255
+K L R L+ + + + + +TLR+SP + P+ C +V + + I
Sbjct: 202 EKPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTD 261
Query: 256 KIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I +S D++I C I GDD IA+K G G+A P+ N+ + +
Sbjct: 262 GIDPANS-RDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTENVTVTD 304
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 57/290 (19%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P FN+ DFG +G T+A A+ A +GGGQ+ +P G + T +L
Sbjct: 39 VPTFPAKQFNIKDFGAKENGQYDCTQAINSAIEACHA---QGGGQVYIPDGTYFTGAIHL 95
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L+D+A + + ++ +P + + G E G + I+ +++ ITG
Sbjct: 96 LSNVNLHLSDNAIVSFSTDPTHY--LPEVFTRWEGLEMMG--YSPLIYAFEQENIAITG- 150
Query: 189 NGTINGQG--QAWW------------------------KKYRQKLLNNT----------- 211
GT+ G G Q WW ++ R +L+ +
Sbjct: 151 KGTLQGNGDNQTWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMVDAEAGVPVSERIY 210
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFD--- 261
R P +Q +ILI +T+++SPFW ++P CK+VT+ F S D
Sbjct: 211 STGAYLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSSHGPNSDGCD 270
Query: 262 --SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
SC+ + I++C GDD IAIKSG + G G PS NI+I N ++
Sbjct: 271 PESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKE 320
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 121/296 (40%), Gaps = 63/296 (21%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R FN+ +G DG T+NT A +A I + GGG + +P G W+T P L
Sbjct: 261 PYFRKDTFNIVRYGAKADGFTVNTTAIAQA---IDLAHEAGGGTVLIPAGVWVTGPLKLK 317
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP-----RFGSFIHGQNLKD-- 182
S++ L L A + N +P++ H P + I GQ + D
Sbjct: 318 SNVNLHLQKGALLQFSNNRDDYPIVETTWEGQKALRCHAPIWAVGQVNIAITGQGIMDGS 377
Query: 183 -------------------VVITGHNGTINGQGQAWWKKYRQKLLNNT------------ 211
+V +G G + +G AW+ + + N
Sbjct: 378 GEVWKQVKKNKLTSTQWRKLVESG--GVVGKKGDAWYPSEQSRYGNEDVRDWANLWVEGK 435
Query: 212 ------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI----- 254
R ++ I ++LI +T ++SP WTLHP K++T+RN +
Sbjct: 436 TLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWF 495
Query: 255 ---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ +SC +++ C GDDAI +KSG D+ G G P+ N++I+N V
Sbjct: 496 GQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTV 551
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 41/280 (14%)
Query: 58 SFLRWGVASRPIPRLRPAA------FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGG 111
S + G S+P +++ + F++T+FG V DG TLNTEA Q A+ A + G
Sbjct: 76 SVSQSGEISQPSDKIKVSTRGQADRFDITEFGAVADGQTLNTEAIQAAIDACT-----AG 130
Query: 112 GQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY-GREHHGPR 170
G++ VP G ++T L S MTL++ +L +N +P+M Y + GRE
Sbjct: 131 GKVVVPKGTFVTGAIFLKSRMTLYVEQGGVLLGSDNPDDYPVM----QYRWEGREQLC-- 184
Query: 171 FGSFIHGQN-----LKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDIL 225
+ S I+ ++ L+ ++I G G I+ G A + K + RG V + +
Sbjct: 185 YASLINTKDPAEGRLEQIIIEGE-GKIDANGMALFHKEMAE-KKGFRGRAVCLRNVDGVY 242
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ---------LF-------DSCEDMVIE 269
+ +IT+R SP W +H C V++ + I + +F DS D+ I
Sbjct: 243 LKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIF 302
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I+ DD IAIKSG ++ G G PS NI I N +S
Sbjct: 303 NSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKS 342
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
A+ + GGG+++VP G T L S + L L A + + + +P +
Sbjct: 23 ALDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAVEARWEGA 82
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK--KYRQKLLNNTRGPLVQIM 219
GR H P + HG+ +DV ITG GTI+G GQ WW ++R++ L + R L+ +
Sbjct: 83 VGRVH-SPCL--YAHGE--RDVAITG-LGTIDGGGQTWWDTFRHRREELAHPRPTLIGLH 136
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDC 271
+ I ++ LR+SP WT+HP C++VT+ N I +SC ++ I DC
Sbjct: 137 ECERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDC 196
Query: 272 YISVGDDAIAIKSGWDQ 288
+I VGDD IA+K+G ++
Sbjct: 197 HIDVGDDCIALKAGTER 213
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 138/313 (44%), Gaps = 76/313 (24%)
Query: 50 RNAVVGGFSFLRWGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYAIS 104
RN+ F+ G+ +PR++ F+ + DFG VGDGVT N+EAF +A+ +S
Sbjct: 32 RNSFKEAEDFIYHGL-EFDMPRVKEPVFSDLMVSIVDFGAVGDGVTDNSEAFAKAIDYVS 90
Query: 105 KLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGR 164
+KGGG++ VP G WLT P + S++ L + A + + + +PL+ +
Sbjct: 91 ---EKGGGRVIVPRGIWLTGPIIMKSNIDLHVQQGAVVRFSPDFEDYPLIETI-----FE 142
Query: 165 EHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW------------WKKYR-------- 204
+ R S IH NL+++ TG G +G G AW WKK
Sbjct: 143 GLNTFRCMSPIHAHNLENIAFTGK-GIFDGNGDAWRPVKKSKLTESQWKKLVNSGGVLSD 201
Query: 205 -------------------------------QKLLNNTRGPLVQIMWSSDILISNITLRD 233
+K+ + R +V I +L+ T ++
Sbjct: 202 DGQIWYPSEKSKAGDSRDNFNVPDLERKEDFEKIKDFLRPVMVSIKECKRVLLDGPTFQN 261
Query: 234 SPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
SP W +HP C++VTIRN + + L +SC+++VI + VGDDAI KS
Sbjct: 262 SPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDGLDL-ESCKNVVIYNNSFDVGDDAICFKS 320
Query: 285 GWDQYGIAYGRPS 297
G D+ G P+
Sbjct: 321 GKDEDGRKRAVPT 333
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 45/264 (17%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ D+G + D +L+T A Q A+ + G G++ +PPG + +AP + T LA
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAALDDCAGEG----GEVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ AE+ +++ + P + S G + G F +H + +V ITG G I+G G
Sbjct: 99 NGAELRFVQD---FTEFPTVESRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGS 152
Query: 198 AWW-------KKYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRD 233
WW ++Y +L R PL+QI ++ +S +TLR+
Sbjct: 153 YWWVFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 234 SPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
SPFW H +VTI + I I + DS + + D +I GDDAI +KS
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDI-DSSRFVRVSDTHIDAGDDAICLKS 271
Query: 285 GWDQYGIAYGRPSMNILIRNLVVR 308
G D+ G GRP+ N+++ N V
Sbjct: 272 GKDEQGREVGRPTENVVVTNCTVE 295
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 45/264 (17%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ D+G DG +L+T A Q A+ + G G++ +PPG + +AP + T LA
Sbjct: 7 NVRDYGIDDDG-SLDTAAIQAALDDCAGTG----GEVYLPPGTYRSAPLRVGDDTTFRLA 61
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ AE+ +++ + P + S G G F +H + +V ITG G I+G G
Sbjct: 62 NGAELRFVQD---FTEFPTVESRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGS 115
Query: 198 AWWK-------KYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRD 233
WW+ +Y +L R PL+QI ++ +S +TLR+
Sbjct: 116 YWWEFVSVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRN 175
Query: 234 SPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
SPFW H +VTI + I I + DS + + D +I GDDAI +KS
Sbjct: 176 SPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDI-DSSRFVRVSDTHIDAGDDAICLKS 234
Query: 285 GWDQYGIAYGRPSMNILIRNLVVR 308
G D+ G GRP+ N+++ N V
Sbjct: 235 GKDEEGREVGRPTENVVVTNCTVE 258
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 62/324 (19%)
Query: 34 FTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPI--PRLRPAAFNLTDFGGVGDGVTL 91
F+VL L F + A+ G++ + R I P++ +T FG T
Sbjct: 4 FSVLILMVFFPLI-----ALADGWNEAEYRAIERSIEQPKIAERTVVITKFGA---KTTA 55
Query: 92 NTEAFQRAVY-AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
+ Q+A++ AI+ L K+GGG++ VP G+W T L S + L ++ DA + + +
Sbjct: 56 SAVQNQQAIHRAIAYLAKQGGGKVVVPAGKWQTGALRLASGIELVVSKDALLQFVFDRSL 115
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWWKKYRQKLL 208
+PL+ G ++ P I+ DVV++G GTI+G G + WW +++
Sbjct: 116 YPLVK-TSWEGMMCWNYSP----CIYSYGADDVVVSGE-GTIDGGGSNETWWPMCGKQVF 169
Query: 209 NNTRG-------------------------------------PLVQIMWSSDILISNITL 231
+G L+ + + + +S +TL
Sbjct: 170 GYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQLINFVKGNRVRVSGVTL 229
Query: 232 RDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
SPFW +HP CKNVT+ I ++CE+++I++ + GDD IAIKSG
Sbjct: 230 LHSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSG 289
Query: 286 WDQYGIAYGRPSMNILIRNLVVRS 309
+ G + +PS NI+IRN V+
Sbjct: 290 RNNDGRMWNKPSRNIIIRNCVMED 313
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 125/278 (44%), Gaps = 51/278 (18%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G L EA A+ S+ G GG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTG---GGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKY---------------WPLMPPLPSYGYGREHHGPRFGSFIHGQ 178
L L + A L +EKY + L P + Y YG + G I GQ
Sbjct: 103 LHLEEGA-YLKFSSEKYLYTPTVLTRWEGVDCYNLHPLI--YAYGESNIGITGKGIIDGQ 159
Query: 179 NLKD----VVITGHNGTINGQGQAWWKKYRQKLL-----------------NNTRGPLVQ 217
D + H G G A R KLL + R L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGM-TAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIEDC 271
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+C
Sbjct: 219 LYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENC 278
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG + G + PS NI++RN ++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKD 316
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 125/278 (44%), Gaps = 51/278 (18%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G L EA A+ S+ G GG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTG---GGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKY---------------WPLMPPLPSYGYGREHHGPRFGSFIHGQ 178
L L + A L +EKY + L P + Y YG + G I GQ
Sbjct: 103 LHLEEGA-YLKFSSEKYLYTPTVLTRWEGVDCYNLHPLI--YAYGESNIGITGKGIIDGQ 159
Query: 179 NLKD----VVITGHNGTINGQGQAWWKKYRQKLL-----------------NNTRGPLVQ 217
D + H G G A R KLL + R L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGM-TAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIEDC 271
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+C
Sbjct: 219 LYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENC 278
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG + G + PS NI++RN ++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKD 316
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 125/278 (44%), Gaps = 51/278 (18%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G L EA A+ S+ G GG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEILCHEAINLAILTCSQTG---GGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKY---------------WPLMPPLPSYGYGREHHGPRFGSFIHGQ 178
L L + A L +EKY + L P + Y YG + G I GQ
Sbjct: 103 LHLEEGA-YLKFSSEKYLYTPTVLTRWEGVDCYNLHPLI--YAYGESNIGITGKGIIDGQ 159
Query: 179 NLKD----VVITGHNGTINGQGQAWWKKYRQKLL-----------------NNTRGPLVQ 217
D + H G G A R KLL + R L+
Sbjct: 160 ASNDNWWSMCGAPHYGWKEGM-TAQKNGGRDKLLMYAETFAPIDKRQMTFEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIEDC 271
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+C
Sbjct: 219 LYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIENC 278
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG + G + PS NI++RN ++
Sbjct: 279 IFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKD 316
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 43/266 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ ++G GD L+TEA Q A+ ++ GG + VP G ++T P + TL L
Sbjct: 34 FDIREYGATGDSDALDTEAIQTALDECAE----SGGTVYVPSGTYVTGPLRVGDQTTLHL 89
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + + + P + S G +G F + + ++V ITG GTI+G G
Sbjct: 90 DAGATLQFVGD---YEAFPTVQSRWEGWNQYG--FHPCLLVDDAENVSITGR-GTIDGGG 143
Query: 197 QAWWKKY-----------RQKLLN--------------NTRGPLVQIMWSSDILISNITL 231
+ WW+ Y +++L R PL QI S ++ +S +TL
Sbjct: 144 EYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVSGVTL 203
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIK 283
+SPFW H +NVTI + I+ DS + I D YI+ GDDAI IK
Sbjct: 204 ENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIK 263
Query: 284 SGWDQYGIAYGRPSMNILIRNLVVRS 309
SG + G G P+ I + N V +
Sbjct: 264 SGKNAEGREVGEPASQITVTNCTVEA 289
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 26/253 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDGV +T Q A+ + + ++ +P G + L H+T+
Sbjct: 80 TLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTME 134
Query: 136 LADDAEILA-IENEKYWPLMPPLPSYGYGREH-----HGPR---FGSFIHGQNLKDVVIT 186
LA A + A E E++ L S E+ G F ++G +KDV I
Sbjct: 135 LAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTIC 194
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GTI+G + WW ++ + R ++ + D+ I+ IT+++SP W +HPY C
Sbjct: 195 GE-GTIDGNASWENWWLDAKE-VRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFC 252
Query: 245 KNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
++ + ++ +SC+D+ I C SVGDD IA+K+G G Y P
Sbjct: 253 SHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVP 312
Query: 297 SMNILIRNLVVRS 309
S NI IR +R
Sbjct: 313 SSNIRIRQCCMRD 325
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 26/253 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDGV +T Q A+ + + ++ +P G + L H+T+
Sbjct: 90 TLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTME 144
Query: 136 LADDAEILA-IENEKYWPLMPPLPSYGYGREH-----HGPR---FGSFIHGQNLKDVVIT 186
LA A + A E E++ L S E+ G F ++G +KDV I
Sbjct: 145 LAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTIC 204
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GTI+G + WW ++ + R ++ + D+ I+ IT+++SP W +HPY C
Sbjct: 205 GE-GTIDGNASWENWWLDAKE-VRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFC 262
Query: 245 KNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
++ + ++ +SC+D+ I C SVGDD IA+K+G G Y P
Sbjct: 263 SHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVP 322
Query: 297 SMNILIRNLVVRS 309
S NI IR +R
Sbjct: 323 SSNIRIRQCCMRD 335
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 45/264 (17%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ D+G + D +L+T A Q A+ + G G++ +PPG + +AP + T LA
Sbjct: 44 NVRDYG-IEDDDSLDTAAIQAALDDCAGEG----GEVYLPPGTYRSAPLRVGDDTTFRLA 98
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
+ AE+ +++ + P + S G + G F +H + +V ITG G I+G G
Sbjct: 99 NGAELRFVQD---FTEFPTVESRWEGWDQDG--FHPCLHVADASNVTITGE-GIIDGGGS 152
Query: 198 AWWK-------KYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRD 233
WW+ +Y +L R PL+QI ++ +S +TLR+
Sbjct: 153 YWWEFVSLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRN 212
Query: 234 SPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
SPFW H +VTI + I I + DS + + D +I GDDAI +KS
Sbjct: 213 SPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDI-DSSRFVRVSDTHIDAGDDAICLKS 271
Query: 285 GWDQYGIAYGRPSMNILIRNLVVR 308
G D+ G GRP+ N+++ N V
Sbjct: 272 GKDEQGREVGRPTENVVVTNCTVE 295
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 120/297 (40%), Gaps = 68/297 (22%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P NL DFG VG+G L TEAF A I+ L +GGG L VP G W T P L
Sbjct: 43 PEFPDRTVNLKDFGAVGNGKDLCTEAFASA---INTLSGQGGGHLIVPAGVWFTGPIVLK 99
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L A IL + +PL+ + R P I G+NL++V ITG
Sbjct: 100 SNIDLHLEKGAVILFSPDVDLYPLVETVFEGLDTRRCQSP-----ISGRNLENVAITGE- 153
Query: 190 GTINGQGQAW------------WKK----------------YRQKLLNNT---------- 211
G I+G G W WK+ Y + L +T
Sbjct: 154 GAIDGNGHFWRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHL 213
Query: 212 -------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
R +V ++ ++ + + ++SP W LHP C+NV + +
Sbjct: 214 ITEEEWQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPS 273
Query: 259 L--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC + +I + VGDD I +KSG D+ G R N+++ V
Sbjct: 274 YAQNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTV 330
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 58/290 (20%)
Query: 64 VASRPIPRLRPA-AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL 122
V ++ +P + P +F +TD+ V D TL T A RA+ S+ +GGG++ +P G +L
Sbjct: 36 VNNQIVPPVFPERSFVITDYHDVKD--TLYTNAINRAITICSE---QGGGKVIIPDGEFL 90
Query: 123 TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
TAP L S++ L L+D + +L + ++ + G + P I+ +
Sbjct: 91 TAPIRLKSNVNLHLSD-STVLKFTTDPFFFDLVQTRIEGIDCYNISP----LIYAYGETN 145
Query: 183 VVITGHNGTINGQGQA--WW-------------KKYRQKLL------------------- 208
+ ITG NG ++GQ + W+ KK +K L
Sbjct: 146 IAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRE 204
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
N R + + +IL+ TL SPFW +HP +N+T+R K+Q
Sbjct: 205 NGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKV---KMQSHGYNNDGCD 261
Query: 261 -DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC +++IEDC GDD IAIKSG D+ G + PS NI++R+ ++
Sbjct: 262 PESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKD 311
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 58/290 (20%)
Query: 64 VASRPIPRLRPA-AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL 122
V ++ +P + P +F +TD+ V D TL T A RA+ S+ +GGG++ +P G +L
Sbjct: 36 VNNQIVPPVFPERSFVITDYHDVKD--TLYTNAINRAITICSE---QGGGKVIIPDGEFL 90
Query: 123 TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
TAP L S++ L L+D + +L + ++ + G + P I+ +
Sbjct: 91 TAPIRLKSNVNLHLSD-STVLKFTTDPFFFDLVQTRIEGIDCYNISP----LIYAYGETN 145
Query: 183 VVITGHNGTINGQGQA--WW-------------KKYRQKLL------------------- 208
+ ITG NG ++GQ + W+ KK +K L
Sbjct: 146 IAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEMKEDSIPFKERVFMRE 204
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
N R + + +IL+ TL SPFW +HP +N+T+R K+Q
Sbjct: 205 NGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKV---KMQSHGYNNDGCD 261
Query: 261 -DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC +++IEDC GDD IAIKSG D+ G + PS NI++R+ ++
Sbjct: 262 PESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKD 311
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 54/273 (19%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++T +G + T+A ++ I+ GGG + P G++LT P +L S++T+ +
Sbjct: 23 FDVTKYGAKKNSSIKATKAIEKT---ITAAAAAGGGTVYFPAGKYLTGPIHLKSNITILI 79
Query: 137 ADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTI 192
AE+ + + + Y P++ + G SF + ++++ ITG G I
Sbjct: 80 DAGAELHFSDDFDDYLPMVES--------RYEGVDVTSFSPLFYANGVENIAITGR-GVI 130
Query: 193 NGQGQAWW--------------------KKYRQKLLNNT---------RGPLVQIMWSSD 223
+G G+ WW ++ + LL + R P +Q + S +
Sbjct: 131 DGHGKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFLRPPFIQFLHSKN 190
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYIS 274
ILI I +R+SPFWT++P C+NVT+ I+ +SC ++ I DC+IS
Sbjct: 191 ILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPESCSNVHISDCHIS 250
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
VGDD I IKSG D G + RP+ N I N +
Sbjct: 251 VGDDCITIKSGKDIPGRSKNRPAENYTITNCTM 283
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L SC + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSC-NFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 26/251 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
N+ DFG +GDG L++ Q A+ A K G + +P G++L P L S++ +++
Sbjct: 83 LNVKDFGALGDGSGLDSGYIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDIWI 137
Query: 137 ADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGP--RFGSFIHGQNLKDVVITG 187
DA ++ ++ K +P++P + Y G P F + I G ++++V I G
Sbjct: 138 DKDAILIGEKDRKKYPILPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHIYG 197
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G ++G WWK ++K + R V + +I + + + +SP WT+HPY
Sbjct: 198 E-GILDGNASMLDWWKDAKKKNIA-WRPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSD 255
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
N+ N I +SCE+++I ISVGDD +AIKSG + + +P+
Sbjct: 256 NLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPA 315
Query: 298 MNILIRNLVVR 308
NI+IRN + R
Sbjct: 316 KNIVIRNSIFR 326
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 52/274 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH-MTLF 135
+ L FG VG+G +EAF +A+ A+S GG L++ G +LT P ++ + + L
Sbjct: 4 YTLKSFGAVGNGQQNESEAFAKALAALSD-----GGVLHIEEGTYLTGPLHIQAKGLVLE 58
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A I I +E L P+ S G + I +N +++ G G I+G
Sbjct: 59 LDRGAVIQFIADEN---LYTPVYSRWEGVNCYCMHPCLLI--ENSDGLIVRGE-GIIDGN 112
Query: 196 GQAWWKKYRQKLLNNT--------------------------------RGPLVQIMWSSD 223
GQ WW +K R PLVQI+ S++
Sbjct: 113 GQWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNN 172
Query: 224 ILISNITLRDSPFWTLHP--------YDCKNVTIRNAFISKIQLFDSCEDMVIEDCYISV 275
+ + +TL++SPFWTLHP D K + ++A + DSC + I+ C + V
Sbjct: 173 VKLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDV 232
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IA+KSG G+A +P+ +ILI V+S
Sbjct: 233 GDDGIALKSGSGPDGVATNKPTTDILIEECTVKS 266
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L SC + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSC-NFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FN+ + G G+ TE + I K +GGG + P G +LTA + +++TL+
Sbjct: 21 TFNMKELGADPRGIESCTELINQT---IEKASSEGGGTIYFPAGVYLTATIYMKNNITLY 77
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + + E Y P + + G P I+ + +++ ITG GT++G
Sbjct: 78 VESGAVLRFSDRFEDYLPFVK-IRWEGTVMNTLSP----LIYAHDAENLTITGR-GTLDG 131
Query: 195 QGQAWW---KKYRQKLLNNT-----------------------------------RGPLV 216
G WW K+ R+ + N R P +
Sbjct: 132 NGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERRMFRPPFI 191
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q +++LI N+ + +SPFWT++P C NVT+ I SC +
Sbjct: 192 QFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINPSSCRN 251
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+ NI I N V+ S
Sbjct: 252 VRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLS 295
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFQSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L SC + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDLEMSC-NFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 50/285 (17%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
S+ + P N+ D GG +G L TEA Q A I K + GGG L P G +LT
Sbjct: 17 SQSLTAANPGWTNILDVGGNNEG-QLCTEAIQSA---IDKAAEAGGGTLFFPAGDYLTGA 72
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
++ S+ TL L A + N ++ +P + G + F I+ +++ I
Sbjct: 73 IHMKSNTTLHLDAGAVLRFSTNFDHY--LPFVQMRWEGTVMN--NFSPLIYAYEAENITI 128
Query: 186 TGHNGTINGQGQAWWKK-YR--------------QKL-------------------LNNT 211
TG G I+GQG+ WW + YR QK+ L
Sbjct: 129 TGR-GKIDGQGKDWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTMRLKFF 187
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFD-------SCE 264
R PL+Q ++ I +T+ +SPFWT++P C NVTI I + SC
Sbjct: 188 RPPLIQPFRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENPPSPNTDGINPTSCR 247
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
++ I D +ISVGDD I IKSG D G + P+ N+ I N + S
Sbjct: 248 NVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLS 292
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ FG D LNTEA Q+A+ A + GGG + VP G +LT L S++ L L
Sbjct: 2 YDILTFGASID--ELNTEAIQKAIDAAAS---AGGGTVVVPAGEFLTGALFLKSNVELHL 56
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ K +P++ + H + S I+ QN++++ +TG GT++G G
Sbjct: 57 SAGAVLKFSDDPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTGF-GTLDGNG 110
Query: 197 QAWWKKYRQKLLNNT--RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
+ WW +R + N R L+ I + +I L SP WT++P C N T N I
Sbjct: 111 KKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTI 170
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM-NILIRNL 305
+SC+++ I +C+I VGDD IAIK+G + Y R + NI I N
Sbjct: 171 LNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNC 227
Query: 306 VV 307
+
Sbjct: 228 TM 229
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 60/286 (20%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +LTDFG V DG+TLNTEAF++ AISKL K GGG L VP G +LT P +L
Sbjct: 62 MPTIPNNQVSLTDFGAVPDGITLNTEAFRK---AISKLTKLGGGHLIVPAGIYLTGPISL 118
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
++ + L +A IL N+K + P+ S I ++ ITG
Sbjct: 119 KDNIDIHLERNALILFSPNKKDF--------LKATDNEPQPKVVSGITASKRTNISITGE 170
Query: 189 NGTINGQGQAW------------WKKYRQ-----------------KLLNN--------- 210
GTI+G GQ W W +Y+ K N
Sbjct: 171 -GTIDGNGQWWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQE 229
Query: 211 -TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV-----TIR---NAFISKIQLFD 261
R L++I +++LI +T+++SP + + P C NV T+R NA
Sbjct: 230 KMRAHLIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVG 289
Query: 262 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+C +++I + VGDDAI +KSG ++ R +NI I+N V
Sbjct: 290 NCSNVLIVNSTFDVGDDAICMKSGAEKAD-QTNRSCVNINIQNNTV 334
>gi|255531611|ref|YP_003091983.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344595|gb|ACU03921.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 518
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 30/230 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
++ A FN+ +G +GDG TLNTEA Q+A+ A + GGG++ P GR+L+ L +
Sbjct: 23 VKAADFNILKYGAIGDGTTLNTEAIQKAIDACY---QSGGGKVIFPEGRFLSGTIVLKDN 79
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNG 190
+T+ +A +L + K + + P E G G + + + +++ + G G
Sbjct: 80 ITIHFERNAVLLGSTDLKDYRNLDPFT------EGLGIDVGWALLVAVDARNIGLEGE-G 132
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP---------LVQIMWSSDILISNITLRDSPFWTLHP 241
TI+GQG A +K+ +L +TR LV+I+ + ++ +TL+ + WT H
Sbjct: 133 TIDGQGSAIKEKH---ILTDTRPEGQRWGLRPFLVRIVRCDGVTVNGVTLKYAGAWTSHY 189
Query: 242 YDCKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS 284
+ KN+ I N I + + D C+D+VI++C + GDDA+ K+
Sbjct: 190 FQSKNLHIENVKIMSVGVAHNDGIGIDGCQDVVIKNCDVVSGDDALVFKT 239
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 53/278 (19%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G EA A+ S+ GGG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
L L + A L +EKY P + + G + + I+ ++ ITG G I+
Sbjct: 103 LHLEEGA-YLKFSSEKYL-YTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIID 157
Query: 194 GQG--QAWWKKY------------------RQKLL-----------------NNTRGPLV 216
GQ WW R KLL + R L+
Sbjct: 158 GQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLI 217
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIED 270
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+
Sbjct: 218 NLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIEN 277
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
C GDD IAIKSG + G + PS NI++RN ++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 50/282 (17%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFNL 128
P++ FN+TD+ D +L AI + GK GGG++ +P G + P +
Sbjct: 41 PKIPERVFNITDYA---DKASLAENIKPALDKAIEECGKSGGGKIIIPEGVYKCNGPIHF 97
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L +A +L N K + +P + + G E + + I+G + +V ITG
Sbjct: 98 KSNINLHLEKNAVVLFSTNPKDY--LPVVFTRWEGVECYN--YSPLIYGFEVDNVAITGE 153
Query: 189 NGTINGQG--QAWWK----------------KYRQKL--LNNTRGPL------------- 215
G +G + WWK R +L +NN P+
Sbjct: 154 -GVFDGMASDENWWKWKGRKNPKDDETQNNPNSRPRLFEMNNQDVPVDKRVFGEGHYLRP 212
Query: 216 --VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMV 267
VQ S +ILI +T ++SP W LHP +N+ IRN + +SC++++
Sbjct: 213 NFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNVKTIGHGPNNDGCDPESCKNVL 272
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IE CY GDD IAIKSG + G PS NI+IRN ++
Sbjct: 273 IEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCTMKD 314
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 48/291 (16%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
W +A + + ++ +F DF G N + AI+ K GGG++ VP G W
Sbjct: 41 WALAEQILRDIKLTSFPQRDFVITAFGAKQNQRCDKAITEAIAACHKAGGGRVVVPEGVW 100
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
T P +L S++ L L +A + + + + + +P + + G E G F I+ +
Sbjct: 101 STGPVHLKSNVNLHLQKNAVLSFVTDPQAY--LPEVFTRWEGVELMG--FSPLIYAYQQQ 156
Query: 182 DVVITGHNGTI--NGQGQAWW-------------------KKYRQKLL------------ 208
++ +TG G + N G+ WW K R +L
Sbjct: 157 NIAVTGE-GILEGNASGENWWPWKGVWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKR 215
Query: 209 ----NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN----AFISKIQLF 260
N R P +Q +LI +T+R+SPFW ++P CK+V IR +F
Sbjct: 216 YLDNNRLRPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVSFGPNSDGC 275
Query: 261 D--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D SC+ ++IE+C GDD IA+KSG + G P ++I++ +++S
Sbjct: 276 DPESCQRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKS 326
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TEA Q I +L ++GGG++ GR+ T L S++ L L A ++ ++ K
Sbjct: 16 LLTEAIQEK---IDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLL 208
+P++ G RE + S ++ +N +++ +TG G ++GQGQ WWK +R+ + L
Sbjct: 73 YPVVVSRWE-GVKRE----VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
R L+ I + +I L DSP WT++P C+N+TI N I
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWD 287
+SC+++ I +C+I VGDD IAIKSG +
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTE 213
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 53/278 (19%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G EA A+ S+ GGG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
L L + A L +EKY P + + G + + I+ ++ ITG G I+
Sbjct: 103 LHLEEGA-YLKFSSEKYL-YTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIID 157
Query: 194 GQG--QAWWKKY------------------RQKLL-----------------NNTRGPLV 216
GQ WW R KLL + R L+
Sbjct: 158 GQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAETFAPIDKRQMTFEDGLRPQLI 217
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIED 270
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+
Sbjct: 218 NLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIEN 277
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
C GDD IAIKSG + G + PS NI++RN ++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 33/269 (12%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+R IP+ ++N+ D+G V DGVT+NT+A Q+A I + + GGG + PG++LT
Sbjct: 34 TGARNIPKSN-RSYNVADYGAVADGVTMNTKAIQKA---IDECARNGGGTVTFSPGKYLT 89
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
L + + +L + K +P M + G E P + GQ K+V
Sbjct: 90 GSVYLKEGVHFIIPKHTTLLGSTDLKDYPEMNTRVA---GIEMQWPSALINVLGQ--KNV 144
Query: 184 VITGHNGTINGQGQAWW-------KKYRQKLL------NNTRGPLVQIMWSSDILISNIT 230
+++G G ++ QG+ +W K Y K L + R + + SSD+ + +T
Sbjct: 145 MVSGE-GVVHAQGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSESSDVTVKGLT 203
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFI----------SKIQLFDSCEDMVIEDCYISVGDDAI 280
R + FWT+ T+ I + DS +++E+C I DD
Sbjct: 204 FRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVENCDIDCNDDNF 263
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+KSG D G+ RP+ I+IRN + R+
Sbjct: 264 CLKSGRDADGLRVNRPTEYIVIRNCISRA 292
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 45/270 (16%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+ P N+ ++G + D +L+TEA Q A+ + G G++ +P G +L+AP +
Sbjct: 24 MTPDQRNVREYG-IEDDDSLDTEAIQAALDDCAGEG----GEVYLPSGTYLSAPLRVGDD 78
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL +A+ AE+ + + + +P + S G G F ++ + ++V ITG G
Sbjct: 79 TTLRVANGAELRFVGDFREFPT---VESRWEGWNQDG--FHPCLYVADAENVTITGE-GV 132
Query: 192 INGQGQAWWK----------------------KYRQKLLNN--TRGPLVQIMWSSDILIS 227
++G G WW +RQ ++ R PL+QI ++ +S
Sbjct: 133 VDGGGSHWWDLVETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVS 192
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDD 278
+TLR+SPFW H ++VTI + I I + DS + + D +I GDD
Sbjct: 193 GVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDI-DSSRFVRVSDTHIDAGDD 251
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
AI +KSG D+ G GRP+ N+++ N V
Sbjct: 252 AICLKSGKDEEGREVGRPTENVVVTNCTVE 281
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 53/278 (19%)
Query: 76 AFNLTDFGGV--GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
+N+ DFG +G EA A+ S+ GGG + VPPG +LT P L S++
Sbjct: 46 VYNIKDFGAKEGNNGEIFCHEAINLAILTCSQ---AGGGTVLVPPGEFLTGPITLKSNVN 102
Query: 134 LFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
L L + A L +EKY P + + G + + I+ ++ ITG G I+
Sbjct: 103 LHLEEGA-YLKFSSEKYL-YTPTVLTRWEGVDCY--NLHPLIYAYGESNIAITGK-GIID 157
Query: 194 GQG--QAWWKKY------------------RQKLL-----------------NNTRGPLV 216
GQ WW R KLL + R L+
Sbjct: 158 GQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLLMYAKTFAPIDKRQMTFEDGLRPQLI 217
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI-QLFDSCE-----DMVIED 270
+ + ILI N+TL++SPFW +HP C+++T+R +S D C+ +++IE+
Sbjct: 218 NLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKVSSHGPNSDGCDPESSKNVLIEN 277
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
C GDD IAIKSG + G + PS NI++RN ++
Sbjct: 278 CIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMK 315
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TEA Q I +L ++GGG++ GR+ T L S++ L L A ++ ++ K
Sbjct: 16 LLTEAIQEK---IDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLL 208
+P++ G RE + S ++ +N +++ +TG G ++GQGQ WWK +R+ + L
Sbjct: 73 YPVVVSRWE-GVKRE----VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
R L+ I + +I L DSP WT++P C+N+TI N I
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDP 186
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWD 287
+SC+++ I +C+I VGDD IAIKSG +
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTE 213
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 53/276 (19%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
+ F++ DFG V +EA +A ISK K GGG + +P G WLT + S++
Sbjct: 49 KCKEFSIVDFGAVQGNKNKTSEAINKA---ISKANKAGGGVVVIPEGEWLTKKIHFKSNV 105
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L L A +L E + +P + S G E + + I+ K++ ITG G +
Sbjct: 106 NLHLNKGAVLLFSETPDDY--LPAVNSTWEGYECYN--YSPLIYAYKCKNIAITGE-GEL 160
Query: 193 NGQGQAWWK-------------------------KYRQKLLNNT---RGPLVQIMWSSDI 224
+ W + K RQ ++N++ R +Q +I
Sbjct: 161 KAKMDIWKEWFARPKAHMESLKRLYFLASYNKPMKERQ-MVNDSAHFRPQFIQFNRCENI 219
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIEDCYI 273
L+ +T+ +SPFWT+HP+ K+V +RN ++++ + ++++IE+C
Sbjct: 220 LMDGVTITNSPFWTIHPFLSKDVVLRN-----LKVYAHGHNNDGVDPEMSQNVLIENCIF 274
Query: 274 SVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDDAIAIKSG +Q S NI++RN V++
Sbjct: 275 DQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKN 310
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFNL 128
P +++TD+G D + A + AIS GGG + +P G + + L
Sbjct: 44 PVFADTVYDVTDYGAKSDTTFDSCPAI---LQAISHCNTNGGGTVLIPAGNYFIKGAITL 100
Query: 129 TSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S++ L +A+ A + + E Y P++ L + G E + FI+ +V +TG
Sbjct: 101 KSNINLHIAEGARLEFSTEAADYLPMV--LTKW-EGTECF--NYSPFIYAYQCTNVAVTG 155
Query: 188 HNGTINGQGQAWWK-----------KYRQKLLNNT-------------RGPLVQIMWSSD 223
GTI+G G + + RQ +++ R ++Q +
Sbjct: 156 K-GTIDGNGSVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKN 214
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISVGD 277
+L+ ++ + DSPFW +HP C NVT+RN +I +SC +++IE +VGD
Sbjct: 215 VLVEDLKIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESCTNVLIEGMDFNVGD 274
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNL 305
D IAIKSG DQ G G+ + N++IRN
Sbjct: 275 DGIAIKSGRDQDGWRIGQATENVIIRNC 302
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 47/263 (17%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+A ++ DFG VGDGV +T + Q AV + GG+L P G +LT P NL SH+T+
Sbjct: 75 SAVSVKDFGAVGDGVADDTLSIQTAVNCLP-----AGGRLRFPEGTYLTGPINLKSHITI 129
Query: 135 FLADDAEILAIENEKYWPLMPP-LPSYGYGREHH--------GPRFGSFIHGQNLKDVVI 185
+ A +L + +P +P + G E H P + + + +D+ I
Sbjct: 130 EFTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAEDIKI 189
Query: 186 TGHNGTINGQGQ--AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
G GT++G Q WW + + + R L+ + + IT +++ W LHPY
Sbjct: 190 VGR-GTVDGNAQNSQWWVDVKNQEVPRPR--LIFFNRCKLVTVHGITAQNAASWQLHPY- 245
Query: 244 CKNVTIRNAFISKIQLFD------------------SCEDMVIEDCYISVGDDAIAIKSG 285
F +++Q D +C+ + I C SVGDD IAIKSG
Sbjct: 246 ---------FSTELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSG 296
Query: 286 WDQYGIAYGRPSMNILIRNLVVR 308
+ G + +P+ IRN +++
Sbjct: 297 KIEIGRKFKQPANRHTIRNCIMQ 319
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 43/267 (16%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
F++ ++G GD +TEA Q A+ ++ GG + VP G ++T P + TL+
Sbjct: 8 GFDIREYGATGDSDEPDTEAIQAALDECAE----SGGTVYVPSGTYVTGPLRVGDRTTLY 63
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A + + + + P + S G +G F + + ++V ITG GTI+G
Sbjct: 64 LDAGATLQFVGD---YEAFPTVQSRWEGWNQYG--FHPCLLVDDAENVSITGR-GTIDGG 117
Query: 196 GQAWWKKY-----------RQKLLN--------------NTRGPLVQIMWSSDILISNIT 230
G+ WW+ Y +++L R PL QI S ++ +S +T
Sbjct: 118 GEYWWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGVT 177
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAI 282
L +SPFW H +NVTI + I+ DS + I D YI+ GDDAI I
Sbjct: 178 LENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICI 237
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVRS 309
KSG + G G P+ I + N V +
Sbjct: 238 KSGKNAEGREVGEPASQITVTNCTVEA 264
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 57/283 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
F++ G G+ T+ + I K +GGG + P G +LTA ++ S++TL
Sbjct: 21 TFDMKQLGADAKGIKPCTKLINQT---IEKAASEGGGTIYFPAGTYLTATIHMKSNITLH 77
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A + ++++ +P + + G I+ + ++ ITG GT++G
Sbjct: 78 LESGA--IVRFSDRFEDYLPFVTARWEGTVMQ--TLSPLIYAHSADNLTITGR-GTLDGN 132
Query: 196 GQAWW----------KKYRQKL------------LNNT----------------RGPLVQ 217
G WW K+ KL NN R P +Q
Sbjct: 133 GLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANNDLEISDYYKPSLERKMFRPPFIQ 192
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
++ILI N+ + +SPFWT++P C NVTI I+ SC ++
Sbjct: 193 FYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNV 252
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I DC+ISVGDD I IKSG D G YG+ NI I N ++ S
Sbjct: 253 RISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS 295
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 124/281 (44%), Gaps = 54/281 (19%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P F ++DFG VGDG T ++A + A+ A ++ GGG++ VPPG + T P L
Sbjct: 51 PSFPDQTFVISDFGAVGDGSTDASQAIKSAIQACAE---AGGGKVVVPPGDYPTGPIYLE 107
Query: 130 SHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L DA ++ + + + Y PL+ Y + ++ +++ ITG
Sbjct: 108 SNVNLHLEKDARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAITGE 162
Query: 189 NGTINGQGQA--WW-------------------KKYRQKLLNNT---------------- 211
G ++GQ WW R L
Sbjct: 163 -GILDGQANETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKFGEGFY 221
Query: 212 -RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCE----- 264
R VQ ++L+ + + +SP W L+P C+NVTI + S D C+
Sbjct: 222 LRPQFVQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVESHGPNSDGCDPESSK 281
Query: 265 DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+++I+DCY + GDD IAIKSG + G PS NI+I+N
Sbjct: 282 NVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNC 322
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 128/284 (45%), Gaps = 53/284 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P A ++T+ G ++EA ++ I+K+ GGG + VP G + T P +L
Sbjct: 53 PSFPDYAMSITELGAKPGFENDSSEAIRQT---IAKVVSAGGGTVVVPAGEFYTGPVHLE 109
Query: 130 SHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ +A A + E E+Y P + + G E G I+ +V ITG
Sbjct: 110 SNINFHIAKGAVLHFYPEPERYKPY---VFTRWEGTELMG--LSPLIYAYKKTNVAITGK 164
Query: 189 NGTINGQG--QAWW------------------KKYRQKLL-----------------NNT 211
G + G G Q WW +K+ + +L N
Sbjct: 165 -GILEGGGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKNNYL 223
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCED 265
R P +Q ++LI +T+++SPFW ++P CKNVT+RN S ++C D
Sbjct: 224 RPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVRNIHCDSHGPNSDGCDPEACTD 283
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
++IE+C GDD IAIKSG + G G+P NILI N +RS
Sbjct: 284 VLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRS 327
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 58/319 (18%)
Query: 31 KTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPR-------LRPAAFNLTDFG 83
+ LF +L +F ++ A VGG + V + P P F +T +G
Sbjct: 6 RILFIAAYLVSFFPLY-----AGVGGVKHQKVEVEA-PFPMDSVYLCVFPQKDFPITRYG 59
Query: 84 GVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL 143
G LNT+A RAV A + GGG++ VP G WLT P +L S++ L L A +L
Sbjct: 60 AKEGGKVLNTKAIARAVDACHR---AGGGRVVVPAGEWLTGPVHLKSNVNLHLEKGA-VL 115
Query: 144 AIENEKYWPL--MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK 201
+ + PL +P + + G E + + ++ + +++ ITG +GT+ + + W K
Sbjct: 116 SFTDT---PLDYLPAVMTSWEGMECYN--YSPLVYAYDCENIAITG-SGTLAPRMETWKK 169
Query: 202 -------------------------KYRQ--KLLNNTRGPLVQIMWSSDILISNITLRDS 234
+ RQ + NN R L+ + ++L+ + ++R+S
Sbjct: 170 WFARPQAHMDALKKLYEMASTDIAVEKRQMAEGENNLRPHLIHLNRCRNVLLEDFSIRES 229
Query: 235 PFWTLHPYDCKNVTIR------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
PFWT+H Y CK +R N + + D +IE+C GDDA+ IKSG ++
Sbjct: 230 PFWTIHLYMCKGGIVRRLDVKANGHNNDGIDLEMSRDFLIENCTFDQGDDAVVIKSGRNR 289
Query: 289 YGIAYGRPSMNILIRNLVV 307
PS NI+IRN +
Sbjct: 290 DAWRLDTPSENIVIRNCKI 308
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 42/257 (16%)
Query: 84 GVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL 143
G D +L+T A Q A+ + G G++ +PPG + +AP + TL LA+ AE+
Sbjct: 5 GTDDDDSLDTAAIQAALDDCAGEG----GEVYLPPGTYRSAPLRVGDDTTLRLANGAELR 60
Query: 144 AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK-- 201
+++ + P + S G G F +H + +V ITG G I+G G WW+
Sbjct: 61 FVQD---FTEFPTVESRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 114
Query: 202 -----KYRQKLLN-----------------NTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+Y L R PL+QI ++ +S +TLR+SPFW
Sbjct: 115 SVPPEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 174
Query: 240 HPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
H ++VT+ + I DS + + D +I GDDAI +KSG D+ G
Sbjct: 175 HVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 234
Query: 292 AYGRPSMNILIRNLVVR 308
GRP+ N+++ N V
Sbjct: 235 EVGRPTENVVVTNCTVE 251
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 44/281 (15%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-L 122
V + +P + N+ G GD V+ N +AF +A+ A+ K K GG + VP G + +
Sbjct: 31 VKNIKLPEIPSFQINILKLGAKGDSVSDNKKAFDKAM-ALCK--KNNGGTIIVPKGIYKI 87
Query: 123 TAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNL 180
P + S++ L L A+I +N E Y P++ L S+ G ++ P I+ N
Sbjct: 88 NGPIHFVSNVNLKLEKGAKIKFSDNPEDYLPMV--LTSWEGTMLYNYSP----LIYANNC 141
Query: 181 KDVVITGHNGTINGQGQAWWK---------KYRQKLLNNTRGPL---------------V 216
++ I+G GTI+G+G WK K R + +N+ PL +
Sbjct: 142 TNIAISGE-GTIDGEGGKTWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMI 200
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMVIED 270
Q + +IL+ NI + +SPFW LH +++TIR + + +D++IE+
Sbjct: 201 QFLNCKNILVENIRIENSPFWCLHLLKSESITIRGISYKSLNHNNDGIDPEYAKDVLIEN 260
Query: 271 CYISVGDDAIAIKSGWDQYGIA-YGRPSMNILIRNLVVRSM 310
GDD +AIK+G D G A PS NI+IRN + +
Sbjct: 261 VTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCNFKGL 301
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 54/281 (19%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P+ + + D+ D +L T A A+ S+ +GGG + +P G W T P L
Sbjct: 43 PKFPNREYQMLDYYNGTD--SLYTAAINEAINTCSQ---QGGGHVIIPDGTWKTGPIRLK 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREH--HGPRFGSFIHGQNLKDVVITG 187
S++ L L+D A +L + + +P + RE I+ K++ ITG
Sbjct: 98 SNVDLHLSDKAHLLFSTDPRIFPTV-------LTREEGIDCYNISPLIYAYGEKNIAITG 150
Query: 188 HNGTINGQGQA--WWKKYRQKLLNNTRGPL------------------------------ 215
G ++GQ W KK R+ + +++G +
Sbjct: 151 K-GIMDGQSDETNWQKKERRNIQKDSKGKIGERNLLLEYKVNRTPIEQRRFEGMMGMRPQ 209
Query: 216 -VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVI 268
V ++LI T SPFW LHP KNV +R+ + +SCE+++I
Sbjct: 210 FVNTYKCENVLIEGPTFNRSPFWILHPLLSKNVIVRDVNLDSHGRNNDGCDPESCENVLI 269
Query: 269 EDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
E C + GDD IAIKSG D+ G + PS NI+IRN ++
Sbjct: 270 ERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCEMKD 310
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 46/283 (16%)
Query: 60 LRWGVASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL 114
+ W +A+ R+ P F ++TDFG G L+T AF+ A+ +S GGG++
Sbjct: 51 MGWDLAAEIRDRVVPPDFPDFEVSITDFGADPTGEHLSTAAFRDAIEEVSA---AGGGRV 107
Query: 115 NVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF 174
+P G +LT +L S++ L + A + +N ++ +P + + G E + + F
Sbjct: 108 VIPAGEFLTGAIHLRSNVELHVGSGAVVRFSQNPDHY--LPAVYTRWEGVELY--NYSPF 163
Query: 175 IHGQNLKDVVITGHNGTINGQG--QAWWK-------KYRQKLL----------------- 208
I+ + +++V ITG +G ++GQ + WW + R+ L
Sbjct: 164 IYARGVENVAITG-SGVLDGQADEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAG 222
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ-------LFD 261
++ R VQ S +IL+ +TL++SP W +HP N+T+ + + +
Sbjct: 223 HHLRPNFVQFYDSRNILVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSPEGPNNDGVNPE 282
Query: 262 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
S D+VI++ GDD IAIKSG + G G PS NILI N
Sbjct: 283 SSRDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIEN 325
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A ++ GGG++ VP G WLT P + S++ L+L
Sbjct: 53 FIITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 110 EENAVLNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITGK-GTLQPKM 164
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 165 DTWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGF 224
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 285 AGRNQDAWRLNTPCENIVIRNCQI 308
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 123/289 (42%), Gaps = 63/289 (21%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
LR ++ G +G LNT+ I +L + GGG L P G +LT +L S+
Sbjct: 19 LRAERVDMLKTGAKANGKALNTKLINST---IDRLNRGGGGTLFFPAGTYLTGSIHLKSN 75
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITG 187
+TL L A +L +N + Y P + H G SF I+ + +++ I G
Sbjct: 76 ITLELEAGATLLFSDNFDDYLPFVEV--------RHEGVMMKSFQPLIYAVDAENITIKG 127
Query: 188 HNGTINGQGQAWWKKYRQKLLN---------NTRGPL----------------------- 215
GT++GQG+ WW ++ + +++ N P+
Sbjct: 128 E-GTLDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQ 186
Query: 216 --------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------- 260
+Q + + I + + +SPFWT++P C NV I+ I
Sbjct: 187 RRFFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITIDNAPSPNTDGVNP 246
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC ++ I DC+ISVGDD I IKSG D G P NI I N + S
Sbjct: 247 ESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLS 295
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 57/283 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
F++ G G+ T+ + I K +GGG + P G +LTA ++ S++TL
Sbjct: 21 TFDMKQLGADAKGIKPCTKLINQT---IEKAASEGGGTIYFPAGTYLTATIHMKSNITLH 77
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A + ++++ +P + + G I+ + ++ ITG GT++G
Sbjct: 78 LESGA--IVRFSDRFEDYLPFVTARWEGTVMQ--TLSPLIYAHSADNLTITGR-GTLDGN 132
Query: 196 GQAWWK---KYRQKLLNNT-----------------------------------RGPLVQ 217
G WW + R+ + N R P +Q
Sbjct: 133 GLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERKMFRPPFIQ 192
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
++ILI N+ + +SPFWT++P C NVTI I+ SC ++
Sbjct: 193 FYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINPSSCRNV 252
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I DC+ISVGDD I IKSG D G YG+ NI I N ++ S
Sbjct: 253 RISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLS 295
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 71/301 (23%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P+ ++ +G V G+ NT+A ++A IS++ KKGGG + +P G WLT P
Sbjct: 50 PLVSFPKLTVSIEKYGAVAGGLEKNTQAIEKA---ISEVSKKGGGTVKIPRGIWLTGPIT 106
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
L S++ L L D A +L +N + +PL S+ + R S I+ N++++ ITG
Sbjct: 107 LKSNINLHLEDGALLLFSKNFEDYPLTD--TSF---EGLNTMRCISPINAMNVENIAITG 161
Query: 188 HNGTINGQGQAWWKKYRQKL---------------------------------------- 207
G I+G G AW + K+
Sbjct: 162 K-GVIDGNGDAWRPVKKGKMTSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNV 220
Query: 208 --------LNNTRGPLVQIMWS----SDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
L + + L +M S + +L+ T ++SP W +HP +NV IRN +
Sbjct: 221 PNLTKKEDLESVKDFLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVR 280
Query: 256 K---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
+ L +SC++++I + VGDDAI IKSG D+ G G P+ N++++N
Sbjct: 281 NPWYSQNGDGLDL-ESCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNT 339
Query: 307 V 307
V
Sbjct: 340 V 340
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 140/298 (46%), Gaps = 35/298 (11%)
Query: 27 LSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAF--NLTDFGG 84
L + K + T+ L I+ +N+ G +++ + AAF ++ +FG
Sbjct: 39 LVTSKNINTIYNLIPDKEYIIFVKNS---------EGESNKLKVKTEFAAFILDIREFGA 89
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
VGDG T+NT A Q A+ L + + G +LT P L S++T+ +A +A + A
Sbjct: 90 VGDGKTVNTFAIQTAI-----LSAPENSIIEIRDGNYLTGPVLLKSNITINIAGNARLTA 144
Query: 145 IENEKYWPLMPPLPS-------YGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG- 196
++ + +P++P + G F S G ++ +V ITG GTI+G
Sbjct: 145 LKEREMYPILPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNVNITGE-GTIDGNSD 203
Query: 197 -QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV-----TIR 250
+ WWK + K ++ R + + S+I I I + +SP WTLHP N+ IR
Sbjct: 204 RETWWKDAKIKRIS-WRPRTIFLTDCSNINIVGINIENSPSWTLHPVFSSNLGFFDMKIR 262
Query: 251 NAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
N S D SC+++ I SVGDD IAIKSG + G G PS NI I N
Sbjct: 263 NPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIENC 320
>gi|198277537|ref|ZP_03210068.1| hypothetical protein BACPLE_03759 [Bacteroides plebeius DSM 17135]
gi|198270035|gb|EDY94305.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 466
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 30/232 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLF 135
+N+ D+G GDG T + A Q+A+ A S + GGG + VP GR +L PF L SH+ L
Sbjct: 27 YNIMDYGATGDGKTDDALAIQKAINACS---EAGGGTVIVPSGRTFLCGPFKLASHIELH 83
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA ++ +LA +E + + G G +I G++LK+V ITG GT++G
Sbjct: 84 LAPNSRLLANPDESIYTESAFGANRGEGM--------MWISGKDLKNVSITG-TGTLDGN 134
Query: 196 GQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
G A+ K Y K + + R L+ + ++I +I++R+S +W++H C+N
Sbjct: 135 GVAFMGKELEDSYELKPVTDFDPRPHLLTLTNVQKLVIRDISVRNSAYWSVHLIGCRNAM 194
Query: 249 IRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
I ++ +++ D +D+ I +C+I GDD I +K+ ++QYG
Sbjct: 195 IDGITILNDLKIRNGDGIDIDHSKDVRISNCFIESGDDCICLKNRREFEQYG 246
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A ++ GGG++ VP G WLT P + S++ L+L
Sbjct: 53 FIITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 110 EENAVLNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITGK-GTLQPKM 164
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 165 DTWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGF 224
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 285 AGRNQDAWRLNTPCENIVIRNCQI 308
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 43/266 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ +FG NTEA Q A+ + G G ++VPPG ++T P + TL L
Sbjct: 9 YDIREFGAQSGSDDSNTEAIQTALDECAGTG----GTVSVPPGTYVTGPLRVGDRTTLHL 64
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + + + P + S G + G + G + V ITG GTI+G G
Sbjct: 65 EAGATLRFVGD---YEAFPTVKSRWEGWDQVGFHPCLLVDGADT--VSITGR-GTIDGNG 118
Query: 197 QAWWKKYRQ----------------KLLNNT---------RGPLVQIMWSSDILISNITL 231
+ WW+ Y + + N+ R PL+Q+ + ++ +S +TL
Sbjct: 119 EYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTL 178
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIK 283
R+SPFW H +NVTI + I DS + I D YI+ GDDAI IK
Sbjct: 179 RNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIK 238
Query: 284 SGWDQYGIAYGRPSMNILIRNLVVRS 309
SG D G G P+ I + N V +
Sbjct: 239 SGKDAEGREVGEPASQITVTNCTVEA 264
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A ++ GGG++ VP G WLT P + S++ L+L
Sbjct: 53 FIITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 110 EENAVLNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITGK-GTLQPKM 164
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 165 DTWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGF 224
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + + F+ + ++EDC GDDA+ IK
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDDIDFEMSRNFLVEDCSFDQGDDAVVIK 284
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 285 AGRNQDAWRLNTPCENIVIRNCQI 308
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 122/284 (42%), Gaps = 59/284 (20%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
F++ G G+ T+ RA I + +GGG + P G +LTA + S++TL
Sbjct: 24 TFDMKRLGADLTGIKPCTDLINRA---IDEAAAEGGGTIYFPAGTYLTATIRMKSNITLD 80
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + + E Y P + + G P I+ N ++ ITG GT++G
Sbjct: 81 IESGATLRFSDRFEDYLPFV-KIRWEGTVMNTLSP----LIYADNADNLTITGR-GTLDG 134
Query: 195 QGQAWW----------KKYRQKL--LNNT--------------------------RGPLV 216
G WW K+ KL LN R P +
Sbjct: 135 NGFKWWAWEVDTRRLIKENGGKLPSLNKLQQMWVDANKDLEISDYYKPSLERRMFRPPFI 194
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCED 265
Q ++I+I N+ + +SPFWT++P C N+T+ I+ SC +
Sbjct: 195 QFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINPTSCSN 254
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I DC+ISVGDD I IKSG D G YG+P N+ I N ++ S
Sbjct: 255 VRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLS 298
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 39/257 (15%)
Query: 81 DFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDA 140
D G GDG TLNT A Q+AV + GGG + +PPG +L+ L SH+TL L A
Sbjct: 34 DTGARGDGHTLNTNALQKAV---DQAAAAGGGVVVIPPGDFLSGGLVLRSHVTLHLEAGA 90
Query: 141 EILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW 200
+ + + P P G HH + + +D+ ITGH GTI+G G A+W
Sbjct: 91 ILRGSPRVEDYEYRPGPPVEGDSNGHH------LLFALDAEDIAITGH-GTIDGGGSAFW 143
Query: 201 -KKYR-----------------QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
+K R + P++++ ++ I +TL ++P WTL P
Sbjct: 144 HRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIELARCRNVRIEGVTLTNAPGWTLRPV 203
Query: 243 DCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
C+ V IR + + +C ++ + DC I+ GDDAI IKS + YG
Sbjct: 204 ACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSDCDIATGDDAICIKS-ENPYGELL- 261
Query: 295 RPSMNILIRNLVVRSMV 311
P+ NI + N V+ +
Sbjct: 262 -PTKNITVTNCVLSTCC 277
>gi|393781089|ref|ZP_10369290.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
gi|392677424|gb|EIY70841.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
Length = 441
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 34 FTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIP-RLRPAAFNLTDFGGVGDGVTLN 92
F L L AF S+ + G W + + + +N+ ++G + D L
Sbjct: 3 FIALLLTAFISLQSFSEEKFPDGTPIPDWFRQNEVVNIQTLGKKYNILEYGVINDSTLLQ 62
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWP 152
TE Q I + ++GGG + +P G +L+ L+L +DA + ++ +P
Sbjct: 63 TEKIQSV---IDQASQQGGGVIVIPKGTYLSGSLFFKPKTHLYLEEDAVLKGSDDISNFP 119
Query: 153 LMPPL---PSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY--RQKL 207
++ S Y F + ++ + I+G GTING G +WK + R+K+
Sbjct: 120 IIDTRMEGQSLSY--------FAALVNADKVDGFTISGK-GTINGNGLRYWKSFWLRRKV 170
Query: 208 ------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-- 259
++ R L+ I S+D+ IS ++L +SPFWT H Y C V + N I
Sbjct: 171 IPKCTNMDELRPRLLYISNSNDVQISGVSLINSPFWTTHLYRCNRVKLLNLHIFSPATPV 230
Query: 260 ---------FDSCEDMVIEDCYISVGDDAIAIKSG 285
D C ++++++CY+SV DDAIA+K G
Sbjct: 231 KAPSTDGIDIDVCSNVLVKNCYLSVNDDAIALKGG 265
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 28/253 (11%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG G+G +T A Q A+ + K G++ VP G + + L S +TL
Sbjct: 85 TLNVKDFGAYGNGEHDDTNAIQCAIMSCPK-----AGRILVPAGEYKISSIFLKSDITLD 139
Query: 136 LADDAEILAIENEKYWPLMPP-LPSYGYGREHH------GP--RFGSFIHGQNLKDVVIT 186
LA A + A + +P++P + SY E++ P F + + G N+++VVIT
Sbjct: 140 LAKGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVIT 199
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNT-RGPLVQIMWSSDILISNITLRDSPFWTLHPY- 242
G GTI+G WW Y K+ N R L I ++ + IT+++SP WTLHPY
Sbjct: 200 GE-GTIDGNAGFDNWW--YNVKVRNIAWRPRLFFINHCRNVTMHGITVQNSPSWTLHPYF 256
Query: 243 -------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
D K N+ + +SC D+ + YISVGDD IAIKSG G +
Sbjct: 257 SDHLKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKI 316
Query: 296 PSMNILIRNLVVR 308
P+ ++ +R +R
Sbjct: 317 PTSDMEVRQCCMR 329
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 43/266 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ +FG NTEA Q A+ + G G ++VPPG ++T P + TL L
Sbjct: 31 YDIREFGAQSGSDDSNTEAIQTALDECAGTG----GTVSVPPGTYVTGPLRVGDRTTLQL 86
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + + + P + S G + G + G + V ITG GTI+G G
Sbjct: 87 EAGATLRFVGD---YEAFPTVKSRWEGWDQVGFHPCLLVDGADT--VSITGR-GTIDGNG 140
Query: 197 QAWWKKYRQ----------------KLLNNT---------RGPLVQIMWSSDILISNITL 231
+ WW+ Y + + N+ R PL+Q+ + ++ +S +TL
Sbjct: 141 EYWWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTL 200
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIK 283
R+SPFW H +NVTI + I DS + I D YI+ GDDAI IK
Sbjct: 201 RNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICIK 260
Query: 284 SGWDQYGIAYGRPSMNILIRNLVVRS 309
SG D G G P+ I + N V +
Sbjct: 261 SGKDAEGREVGEPASQITVTNCTVEA 286
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 47/274 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P +F++T FG G G T A Q+A I + K GGG++ VP G +L+ L
Sbjct: 16 VPVFPDRSFDVTAFGADGSGKKDATGAIQKA---IDQAHKAGGGRVAVPEGVFLSGALRL 72
Query: 129 TSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S++ L LA A I +N E Y P++ L + G E + + I+ +++ ITG
Sbjct: 73 KSNVELHLAQGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEAENIAITG 127
Query: 188 HNGTINGQG--QAWW------------KKYRQKLLNNT-----------------RGPLV 216
GT++GQG + WW +K R L R +
Sbjct: 128 -KGTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFI 186
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIED 270
Q DILI +T+ +SP W +HP C+NVT+ + + +SC+++VI+
Sbjct: 187 QPYRCKDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKNVVIKG 246
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
C+ GDD IA+KSG + G PS NI+I +
Sbjct: 247 CHFDNGDDCIAVKSGRNADGRRINMPSENIVIEH 280
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TEA Q I +L ++GGG++ GR+ T L S++ L L A ++ ++ K
Sbjct: 16 LLTEAIQEK---IDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLL 208
+P++ G RE + S ++ +N +++ +TG G ++GQGQ WWK +R+ + L
Sbjct: 73 YPVVVSRWE-GVKRE----VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
R L+ I + +I L DSP WT++P C+++TI N I
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWD 287
+SC+++ I +C+I VGDD IAIKSG +
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTE 213
>gi|325299494|ref|YP_004259411.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319047|gb|ADY36938.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 471
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 35/251 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLF 135
+N+ D+G GDG T + A QRA+ A S K GGG + VP G +L +PF L S++ L
Sbjct: 31 YNILDYGATGDGTTDDAPALQRAIDACS---KAGGGTVLVPAGHTFLCSPFRLASYVDLH 87
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L ++ +LA +E + + G G +I G+ LK+V ITG GTI+G
Sbjct: 88 LEPNSCLLANPDESVYTESAFGENRGEGM--------MWISGKGLKNVSITG-TGTIDGN 138
Query: 196 GQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
G A+ K Y K + + R ++ + ++I ++T+R+S +WT+H C++ +
Sbjct: 139 GVAFMGKELEDSYELKPVTDFDPRPHVLTLTDVEKLVIRDVTIRNSAYWTVHLIGCRDAS 198
Query: 249 IRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYGRPSM 298
I ++ +++ D +D+ I +C+I GDD I +K+ ++QYG P
Sbjct: 199 IDGINILNNLKIRNGDGIDVDHSKDVRIANCFIESGDDCICLKNRREFEQYG-----PCE 253
Query: 299 NILIRNLVVRS 309
++++ N + S
Sbjct: 254 DVVVSNCTMTS 264
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 129/294 (43%), Gaps = 67/294 (22%)
Query: 67 RPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
+P+P ++ NL DFG GDG +NTEAF + AIS L K+GGG+L VP G W
Sbjct: 33 KPMPTVQAPVIPCNTVNLKDFGATGDGTAMNTEAFSK---AISALNKQGGGRLVVPAGIW 89
Query: 122 LTAPFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
LT +L ++ L L +A I+ + + P+ P + I
Sbjct: 90 LTGLISLKDNIDLHLERNAVIVFSPDKRDLIPVKDGKPD---------AKAAPCIRASKR 140
Query: 181 KDVVITGHNGTINGQGQAW------------WKKYRQ-----------------KLLNNT 211
K+V ITG G I+G G+ W W +Y+ K L N
Sbjct: 141 KNVSITGE-GIIDGNGEYWRPVKRGKVSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNV 199
Query: 212 ----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS---KIQ 258
R LV+ ++L+ +TLR+SP + L P C NV I N + Q
Sbjct: 200 ADNYDAQEKMRTHLVRFTDCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQ 259
Query: 259 LFDS-----CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
D+ C++++I + I GDD I +K G Q G+ G P NI I++ +V
Sbjct: 260 NGDAIDIGNCKNVLIVNNTIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNIV 312
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 19/207 (9%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TEA Q I +L ++GGG++ GR+ T L S++ L L A ++ ++ K
Sbjct: 16 LLTEAIQEK---IDELHQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKD 72
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLL 208
+P++ G RE + S ++ +N +++ +TG G ++GQGQ WWK +R+ + L
Sbjct: 73 YPVVVSRWE-GVKRE----VYASCLYAENAENIAVTGL-GMLDGQGQRWWKTFRENREQL 126
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
R L+ I + +I L DSP WT++P C+++TI N I
Sbjct: 127 AYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDP 186
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWD 287
+SC+++ I +C+I VGDD IAIKSG +
Sbjct: 187 ESCKNVRISNCHIDVGDDCIAIKSGTE 213
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 118/240 (49%), Gaps = 35/240 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ +G +GDG ++T+A Q + A + GGG + VP G + L S++TL L
Sbjct: 51 YNVKRYGAIGDGKAMDTKAVQETIDACHE---AGGGVVRVPAGDFQIGTIVLKSNVTLSL 107
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGS---FIHGQNLKDVVITGHNGTIN 193
A +L N +P+ PR G+ I+ ++ K++ I G G I+
Sbjct: 108 DHGASLLGSTNVADYPI----------ENLRRPREGAAHCLIYAEDAKNITIEGL-GVID 156
Query: 194 GQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN----- 246
G+G + + +K R + R L+++ D+ S +T + FW LH DCKN
Sbjct: 157 GRGTHEFFPRKRRGGKNSGIRPRLMRMESCEDLTFSGVTYKRPAFWGLHLIDCKNIHFSA 216
Query: 247 VTIR---NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
VT+R N + + D CE+++IE+C +S GDDAI +KS + P NI++R
Sbjct: 217 VTLRFRNNNYNNDGLDLDGCENVLIENCDLSTGDDAICLKSSMN--------PCRNIVVR 268
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A +K GGG++ VP G WLT P + S++ L L
Sbjct: 41 FKITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCL 97
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
+DA + +N + + +P + + G E + + ++ ++V I+G GT+
Sbjct: 98 EEDAVLSFTDNPEDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAISG-KGTLQPKM 152
Query: 194 GQGQAWWKK----------------------YRQKLL--NNTRGPLVQIMWSSDILISNI 229
G + W+K+ RQ + N+ R L+ ++++
Sbjct: 153 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGF 212
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 213 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 272
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IRN
Sbjct: 273 AGRNQDAWRLNTPCENIVIRNC 294
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 54/278 (19%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ +G G T+AF A+ A GGG++ V G +L+ P +L S++ L +
Sbjct: 72 FDIRAYGARAGGAIDATKAFANAIAACHA---AGGGKVLVSGGTYLSGPIHLLSNVNLHV 128
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A I I + K + +P + + G E G + I+ +++ ITG GT++GQ
Sbjct: 129 EKGARIAFITDPKAY--LPAVFTRWEGMELMG--YSPLIYAYRQENIAITGE-GTLDGQA 183
Query: 197 Q--AWW---------------------KKYRQKLLN-----------------NTRGPLV 216
WW + R++L N R P V
Sbjct: 184 NRTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANLRPPFV 243
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIED 270
Q +LI +T+ +SPFW L+P C +V +R + +SC+ ++IED
Sbjct: 244 QPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDSMGPNSDGCDPESCDRVLIED 303
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
CY GDD IAIKSG + G RPS NI+IRN +R
Sbjct: 304 CYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMR 341
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 114/238 (47%), Gaps = 36/238 (15%)
Query: 103 ISKLGKKGGGQLNVPPGRW-LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
I GGG + + G + L P +L S + L LA+ A + + K +P + +
Sbjct: 67 IDSCSVAGGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQF--SGKSSDFLPVVLTRW 124
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG----QAWWK-----KYRQKLLNNTR 212
G E +G I+ + ++ ITG GTI+ QG AW K + R + + +
Sbjct: 125 EGTELYG--HSPMIYAYHANNIAITGK-GTIDAQGGLEFAAWSKIEANDRDRLREMGDKL 181
Query: 213 GPL---------------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SK 256
P+ +Q S +LI IT++DSPFWT+HP C NV +R I S
Sbjct: 182 VPVHERIFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDSH 241
Query: 257 IQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIKSG D G GRPS NI+IRN + S
Sbjct: 242 FPNNDGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHS 299
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 68/290 (23%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + ++ D GG GDG+T NTEAF++ AISKL K GGG LNVP G +LT +
Sbjct: 39 VPTIPANTVSILDCGGKGDGITSNTEAFRK---AISKLSKLGGGHLNVPAGIYLTGLISF 95
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL---KDVVI 185
++ L L +A I+ E++K + +E +G + G N K++ I
Sbjct: 96 KDNIDLHLEKNAIIVFSEDKKEFI-----------KEENGVKDDKATPGINASKRKNISI 144
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNT---------------------------------- 211
TG G I+G G+ WW+ ++ ++NT
Sbjct: 145 TGE-GIIDGNGE-WWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATP 202
Query: 212 ------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN-----VTIR---NAFISKI 257
R L+++ ++LI +T+ +SP + + P CKN VT+R NA
Sbjct: 203 EAQEKMRTHLIRLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDA 262
Query: 258 QLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+C +++I + I GDD I +K G + YG P +NI I++ +V
Sbjct: 263 IDIGNCTNVLIVNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIV 311
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 561 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 618
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 619 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 675
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 676 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 735
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 561 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 618
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 619 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 675
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 676 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 735
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 561 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 618
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 619 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 675
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 676 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 735
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 561 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 618
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 619 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 675
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 676 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 735
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 736 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 794
>gi|427383479|ref|ZP_18880199.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
gi|425728663|gb|EKU91518.1| hypothetical protein HMPREF9447_01232 [Bacteroides oleiciplenus YIT
12058]
Length = 432
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+ V D L TE Q I + KGGG + +P G +L+ L+L
Sbjct: 47 YKITDYSVVNDSTLLQTEKIQAV---IDQASSKGGGVVIIPKGTYLSGALFFKPKTHLYL 103
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + ++ + I+G GTING G
Sbjct: 104 EEGAVLKGSDDISNFPIINTRIE-GQSLKY----FAALVNADGVNGFTISGK-GTINGNG 157
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + + ++ R LV + S+D+ IS + L +SPFWT H Y C NV
Sbjct: 158 LRYWKSFWLRRSVIPKCTNMDELRPRLVHVSNSNDVQISGVRLINSPFWTTHIYKCNNVK 217
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 218 LLNLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGG 265
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 79/345 (22%)
Query: 31 KTLFTVLWLAAFASVFIWQR---------NAVVGGFSFLRWGVASRPIPRLRPAAFNLTD 81
KT+F ++W+ F+ + R + V L + + IP+ + N+ D
Sbjct: 5 KTVF-LIWIVMFSLILCSNRIVAQNTSKSKSKVSEERNLPFNMPEVQIPKFKKDTLNIVD 63
Query: 82 FGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAE 141
FG V + L T+A A I K + GGG + +P G W T P L S++ L + A
Sbjct: 64 FGAVPNTGELCTKAINDA---IMKCSESGGGVVAIPSGLWTTGPIYLKSNVNLHTQNGAY 120
Query: 142 ILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW-- 199
IL + + L + SY G + R S I G L+++ ITG G +G G W
Sbjct: 121 ILFTSDLNQYKL---INSYFEG--NKVIRCESPIMGVGLENIAITGK-GIFDGNGSKWRP 174
Query: 200 ---------------------------WKKYRQKLLNNT--------------------- 211
W + L+ N
Sbjct: 175 VKIGKMSDEQWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPSIENMKPYKQAL 234
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT-----IRNAFISK----IQLFDS 262
R +V ++ +L+ +T ++SP W ++P C+NVT IRN + S+ + L +S
Sbjct: 235 RPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDL-ES 293
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
C + +C VGDDAI IKSG DQ G G+P+ +I++ VV
Sbjct: 294 CRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVV 338
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 563 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 620
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 621 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 677
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 678 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 737
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 738 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 796
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 144/324 (44%), Gaps = 62/324 (19%)
Query: 34 FTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPI--PRLRPAAFNLTDFGGVGDGVTL 91
F+VL L F + A+ G++ + R I P++ +T FG T
Sbjct: 6 FSVLILMVFFPLI-----ALADGWNEAEYRAIERSIEQPKIVKRTVVITKFGA---KTTA 57
Query: 92 NTEAFQRAVY-AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
+ Q+A++ AI+ L K GGG++ V G+W T LTS + L ++ DA + + +
Sbjct: 58 SAAQNQQAIHRAIAYLAKLGGGKVVVLAGKWQTGALRLTSGIELVVSKDALLQFVFDRSL 117
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWWKKYRQKLL 208
+PL+ G ++ P I+ DVV++G GTI+G G + WW +++
Sbjct: 118 YPLVKT-SWEGMMCWNYSP----CIYSYGADDVVVSGE-GTIDGGGSNETWWPMCGKQVF 171
Query: 209 NNTRG-------------------------------------PLVQIMWSSDILISNITL 231
+G L+ + + + +S +TL
Sbjct: 172 GYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQGLRPQLINFVKGNRVRVSGVTL 231
Query: 232 RDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
SPFW +HP CKNVT+ I ++CE+++I++ + GDD IAIKSG
Sbjct: 232 LHSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSG 291
Query: 286 WDQYGIAYGRPSMNILIRNLVVRS 309
+ G + +PS NI+IRN V+
Sbjct: 292 RNNDGRMWNKPSRNIIIRNCVMED 315
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 55/286 (19%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVY-AISKLGKKGGGQLNVPPGRWLTAPFNL 128
P++ + +T FG T + QRA+ AI+ L ++GGG++ VP G+W T L
Sbjct: 37 PKIADRSVVITKFGA---KTTASAAQNQRAIQKAIAFLARQGGGKVVVPAGKWHTGALRL 93
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
+S + L ++ DA + + +PL+ G ++ P SF DVV++G
Sbjct: 94 SSGIELVVSKDALLQFVFERSLYPLVKT-SWEGMMCWNYSPCIYSF----GSDDVVVSGE 148
Query: 189 NGTINGQG--QAWWKKYRQKLLNNTRG--------------------------------- 213
GTI+G G + WW +++ +G
Sbjct: 149 -GTIDGGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRFGLGY 207
Query: 214 ----PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSC 263
L+ + + + +S +TL +SPFW +HP CKNVT+ I ++C
Sbjct: 208 GLRPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWNEGPNGDGCDPEAC 267
Query: 264 EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
E+++I++ + GDD IAIKSG + G + +PS NI+IR V+
Sbjct: 268 ENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMED 313
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 48/284 (16%)
Query: 65 ASRPIPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG 119
A I R++P F N+ G GD +T N F +A+ A+ K KKGGG + VP G
Sbjct: 25 ADSIISRIQPPVFSAYQVNVLKLGAKGDSITNNKAVFDKAM-ALCK--KKGGGTIIVPKG 81
Query: 120 RW-LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY-GYGREHHGPRFGSFIHG 177
+ + P + S++ L + A+I +N + +PL+ L S+ G ++ P I+
Sbjct: 82 IYKINGPIHFVSNVNLKIEKGAKIKFSDNPQDYPLV--LTSWEGTMLYNYSP----LIYA 135
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKL---------LNNTRGP-------------- 214
+ ++ ITG G I+G+G WK ++ K +N+ P
Sbjct: 136 VDCTNIAITGV-GIIDGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRP 194
Query: 215 -LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMV 267
++Q + +IL+ N+ + +SPFW LH +N+T+R + + +D++
Sbjct: 195 QMIQFLNCKNILVENVRIENSPFWCLHLLKSQNITVRGISYKSLNYNNDGIDPEYAKDVL 254
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIA-YGRPSMNILIRNLVVRSM 310
IE+ GDD +AIK+G D G A PS NI+IRN + +
Sbjct: 255 IENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCNFKGL 298
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 35/257 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G DG T+NT A Q+A+ A +K GK G + PG +L+ L S+M L L
Sbjct: 18 FRVTDYGAKADGKTVNTVALQKAIDAAAKAGK---GVVVFAPGVYLSGALFLKSNMELRL 74
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ EI +++ +PLM + G E P + ++ +V ++G GT++G G
Sbjct: 75 DEGVEIRGVQDLAAYPLMQTRVA---GIEMKWP--AALLNVYEQSNVRLSGK-GTVDGDG 128
Query: 197 QAWW--------KKYRQKLLN-----NTRGP-LVQIMWSSDILISNITLRDSPFWTLHPY 242
+ WW ++Y K L + R P L+QI S + + ++TL+ FWT+H
Sbjct: 129 KIWWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHIC 188
Query: 243 DCKNV-----TIRNAFISK------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+ V TIRN K I + DS D+++ C I DDAI +K+G D G+
Sbjct: 189 YSERVTVDGLTIRNNTDGKGPSTDGIDI-DSSSDVLVAHCDIDCNDDAICLKAGRDADGL 247
Query: 292 AYGRPSMNILIRNLVVR 308
P+ + I + VVR
Sbjct: 248 RVNLPTERVRITDNVVR 264
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 36/239 (15%)
Query: 102 AISKLGKKGGGQLNVPPG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY 160
AI GGG + + G +L L S + L L DA +L + K +P + +
Sbjct: 544 AIDSCSLAGGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLF--SGKADDFLPEVWTR 601
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ---AWW-----------KKYRQK 206
G E +G I+ ++ ++ ITG GTI+ QG A W +K +K
Sbjct: 602 WEGTELYG--HSPMIYAKHATNIAITGQ-GTIDAQGGREFASWSQIEVSDRNRLRKMGEK 658
Query: 207 LLNNT----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-S 255
L+ T R +Q M S IL+ IT+++SPFWT+HP C NV +R+ I S
Sbjct: 659 LIPVTERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDS 718
Query: 256 KIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D C+ +++IE+C GDDAIAIK+G D G GRPS NI+IRN + +S
Sbjct: 719 HYPNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS 777
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 51/271 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG D ++A V AIS + GGG++ +P G W T +L S++ + L
Sbjct: 52 FVITDFGAEEDDQQATSQAI---VTAISAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A +L E+ K + +P + + G E + I+ + +++ ITG G + +
Sbjct: 109 EEGATLLFSEDPKDY--LPAVKTTWEGMECFN--YSPLIYAFDCENIAITGK-GELKAKM 163
Query: 197 QAW--W----KKYRQKLL---------------------NNTRGPLVQIMWSSDILISNI 229
W W K + + L +N R +Q +L+ +
Sbjct: 164 NTWKVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGV 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIEDCYISVGDD 278
+ +SPFW +HP+ K+V IR+ +Q+F + ++M+IE+C GDD
Sbjct: 224 KITNSPFWVIHPFMSKDVVIRD-----VQVFAHGHNNDGVDPEMSQNMLIENCIFDQGDD 278
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
AIA+KSG +Q P+ NI+IRN +V++
Sbjct: 279 AIAVKSGRNQDAWRLNMPTKNIVIRNSLVKN 309
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 39/266 (14%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT-APFNL 128
P++ + +T FG D A RA+ A +K GGG++ +P G+WL+ P L
Sbjct: 51 PKIPQTDYVITAFGASADAQADARPAIMRAINAAAK---AGGGRVVIPAGKWLSNGPVEL 107
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L L + A +L K++ +P + + G E +G + I+ + DV ITG
Sbjct: 108 QSRINLHLEEGATLLFSAQTKHY--LPAVFTRWEGTEIYG--YSPLIYANKVTDVAITG- 162
Query: 189 NGTINGQGQA----WWK-------KYRQKLLNNT-------------RGPLVQIMWSSDI 224
GTI+G Q+ W K K RQ + R L+QI+ + +
Sbjct: 163 KGTIDGNAQSEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFGEGHFLRPSLIQILNAERV 222
Query: 225 LISNITLRDSPFWTLH-----PYDCKNVTIRNAFISKIQL-FDSCEDMVIEDCYISVGDD 278
L+ + T +SPFW H + V + + F + L DS +++E+ + GDD
Sbjct: 223 LLQDYTALNSPFWVNHLVYTDHAQVRGVKVDSMFANNDGLDIDSGRWILVENNHFRTGDD 282
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRN 304
+IAIKSG D G GRPS NI++RN
Sbjct: 283 SIAIKSGRDLDGRTIGRPSENIVVRN 308
>gi|189467634|ref|ZP_03016419.1| hypothetical protein BACINT_04024 [Bacteroides intestinalis DSM
17393]
gi|189435898|gb|EDV04883.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 436
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+ V D + TE Q I + KGGG + +P G +L+ L+L
Sbjct: 51 YKITDYSVVNDSTLIQTEKIQAV---IDQASSKGGGVVIIPKGTYLSGALFFKPKTHLYL 107
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + ++ + I+G GTING G
Sbjct: 108 EEGAVLKGSDDISNFPIINTRIE-GQSLKY----FAALVNADGVNGFTISGK-GTINGNG 161
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + + ++ R LV I S+D+ IS + L +SPFWT H Y C NV
Sbjct: 162 LRYWKSFWLRRSVIPKCTNMDELRPRLVHISNSNDVQISGVRLINSPFWTTHIYKCNNVK 221
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 222 LLNLYIFSPAAPVKAPSTDAIDIDVCSNVLVKNCYLSVNDDAIALKGG 269
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 49/280 (17%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P++ F +T FG DG T T+A ++ AI + + GGG++ G +LT +L
Sbjct: 44 PKIAAKQFEITRFGARADGKTDCTDAIRK---AIDEAARVGGGRVMAREGAFLTGAIHLK 100
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + A + + K +P++ L + G E + FI+ N +++ ITG
Sbjct: 101 SNVNLVVEKGATLRFSPDPKLYPIV--LTRF-EGLECM--NYSPFIYAFNQQNIAITG-G 154
Query: 190 GTINGQ--GQAWW---------------KKYRQKLLNNT-----------------RGPL 215
GT++GQ G+ WW +K R L+ R
Sbjct: 155 GTLDGQASGEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMF 214
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-FDSCE-----DMVIE 269
+Q +++ I ++T+ +SP + +HP C+NV RN +S D C+ D++I+
Sbjct: 215 IQPYRCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKVSSHGPNNDGCDPESSVDVLID 274
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C GDD IAIKSG + G PS N++++N V++
Sbjct: 275 GCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKD 314
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIVACNK---AGGGRVVIPEGEWLTGPIHFQSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L + + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDL-EMSRNFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 33/250 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L P FN+ DFG VGDG +L+T+A Q+A+ A +K G + VP G +LT S+
Sbjct: 113 LSPKYFNIKDFGAVGDGKSLDTKAIQQAIDACNKQGI-----VVVPKGVYLTGALFFKSY 167
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL-----KDVVIT 186
MTL++ + A + + ++P+ + S G E G ++ S I+G L ++ I
Sbjct: 168 MTLYIEEGAILKGSSDLAHYPI---VRSRFEGIE--GSQYASLINGGTLLSGGIQEFSIR 222
Query: 187 GHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G G I+ G+ + +++ L RG ++ +M +I + +T SP W +H C
Sbjct: 223 G-KGIIDANGENLINQQKKEGL-GYRGRILSLMNGENICLEGVTFLQSPAWGVHFIYCMG 280
Query: 247 VTIRNAFIS-----------KIQ-----LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
VTI++ +I+ KI DS +D+V+ + IS DD ++IKSG D G
Sbjct: 281 VTIKDVYINTRFDPETGRKYKIHNGDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDG 340
Query: 291 IAYGRPSMNI 300
+ + N+
Sbjct: 341 RRVAKSTDNV 350
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 43/266 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ +FG NTEA Q A+ + G G ++VPPG ++T P + TL L
Sbjct: 9 YDIREFGAQSGSDDSNTEAIQTALDECAGTG----GTVSVPPGTYVTGPLRVGDRTTLHL 64
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + + + P + S G + G + G + V ITG G I+G G
Sbjct: 65 EAGATLRFVGD---YEAFPTVQSRWEGWDQIGFHPCLLVDGTDT--VSITGQ-GAIDGNG 118
Query: 197 QAWWKKYRQ----------------KLLNNT---------RGPLVQIMWSSDILISNITL 231
+ WW+ Y + + N+ R PL+QI + ++ +S +TL
Sbjct: 119 EYWWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVTL 178
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQ--------LFDSCEDMVIEDCYISVGDDAIAIK 283
R+SPFW H +NVTI + I DS + I D YI+ GDDAI IK
Sbjct: 179 RNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIK 238
Query: 284 SGWDQYGIAYGRPSMNILIRNLVVRS 309
SG D G G P+ I + N V +
Sbjct: 239 SGKDAEGREVGEPASQITVANCTVEA 264
>gi|398798886|ref|ZP_10558183.1| endopolygalacturonase [Pantoea sp. GM01]
gi|398099709|gb|EJL89961.1| endopolygalacturonase [Pantoea sp. GM01]
Length = 442
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 27/246 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG TL+T FQRA + L +GGG L+VPPGR+ +L S++ L L
Sbjct: 3 LSLADFYPVADGETLDTSCFQRA---LDHLAARGGGTLSVPPGRYHLGTLSLGSNIHLHL 59
Query: 137 ADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A +LA E Y + S +H ++ +++ ++G GTI+G
Sbjct: 60 EAGATLLASARVEDYQQQLA--QSQAELSQH------VLLYAVGQRNITVSG-KGTIDGN 110
Query: 196 GQAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRN 251
G+AW+ + +L R ++ + + + ++ +P WT+H C++V I +
Sbjct: 111 GEAWFATEKDQQGYRLPRAQRPRMLVFEDCEQVTLEDFSILQAPMWTVHLVSCRHVHIDH 170
Query: 252 AFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
I DSCE + + + Y+S DDAI IK+ Q R + I+I
Sbjct: 171 LTIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKTS--QKPAHLRRAARQIMIS 228
Query: 304 NLVVRS 309
N ++RS
Sbjct: 229 NCLLRS 234
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F + +G + DG T NT+A RA+ A S+ GGG++ VP G WLT P + S++ L L
Sbjct: 55 FPINKYGAIADGKTNNTKAIARAIAACSR---AGGGRVVVPAGEWLTGPIHFKSNVNLHL 111
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+++A + +N + +P + + G E + + ++ + +++ ITG GT+
Sbjct: 112 SENAVLRFTDNPDDY--LPAVMTSWEGMECY--NYSPLVYAFDCENIAITG-TGTLQPIM 166
Query: 197 QAWWK-------------------------KYRQ--KLLNNTRGPLVQIMWSSDILISNI 229
W K K RQ K N+ R L+ ++L+
Sbjct: 167 DTWRKWFKRPQPHMDALAELYTMASTDVPVKERQMAKGENHLRPHLIHFNRCQNVLLDQF 226
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCEDM------VIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + + D+ ++E+C GDDA+ IK
Sbjct: 227 KIRESPFWTIHLYLCDGGIVRNLDVRAHGHNNDGVDLEMSRNFLVENCKFDQGDDAVVIK 286
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 287 AGRNQDAWRLDTPCENIVIRNCDI 310
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + +T+ +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVTIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFKSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L + + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDL-EMSRNFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 43/263 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 14 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFKSNVNLHL 70
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT---IN 193
++A + +N + +P + + G E + + ++ + +++ ITG GT I
Sbjct: 71 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITG-KGTLAPIM 125
Query: 194 GQGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNI 229
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 126 DTWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEF 185
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R SPFWT+H Y C +RN + I L + + +IE+C GDDA+ I
Sbjct: 186 KIRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDL-EMSRNFLIENCVFDQGDDAVVI 244
Query: 283 KSGWDQYGIAYGRPSMNILIRNL 305
K+G +Q P NI+IR+
Sbjct: 245 KAGRNQNAWRLNTPCENIVIRHC 267
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFKSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L + + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTIHLYMCDGGIVRNLDVKAHGHNNDGIDL-EMSRNFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IR+
Sbjct: 284 AGRNQDAWRLNTPCENIVIRHC 305
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A +K GGG++ VP G WLT P + S++ L L
Sbjct: 52 FKITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNVNLCL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
+DA + +N + + +P + + G E + + ++ ++V I+G GT+
Sbjct: 109 EEDAVLSFTDNPEDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAISG-KGTLQPKM 163
Query: 194 GQGQAWWKK---YRQKLL---------------------NNTRGPLVQIMWSSDILISNI 229
G + W+K+ + Q L N+ R L+ ++++
Sbjct: 164 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IRN
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNC 305
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 45/273 (16%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P F++T FG G T +T AFQ+A I + +KGGG++ VP G +LT L
Sbjct: 16 VPVFPDRRFDVTRFGADSGGKTDSTAAFQQA---IDEAHQKGGGRVTVPKGVFLTGALRL 72
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L + DA I +N + +P + + G E + + I+ +++ ITG
Sbjct: 73 KSNVELHVTKDAVIRFSQNPADY--LPAVLTRFEGVELY--NYSPLIYAYEAENIAITG- 127
Query: 189 NGTINGQ--------------GQAWWKKYRQKLLNNT-----------------RGPLVQ 217
G ++GQ GQ +K R L R +Q
Sbjct: 128 GGMLDGQADDRHWWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGHYLRPNFIQ 187
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDC 271
++ I +T+ +SP W +HP C+NVT+ + + +SC+ M+I++C
Sbjct: 188 PYRCKNVFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIGHGPNTDGVDPESCKSMIIKNC 247
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
GDD IAIKSG + G PS NI+I N
Sbjct: 248 LFDNGDDCIAIKSGRNADGRRINVPSENIVIEN 280
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 56/313 (17%)
Query: 31 KTLFTVLWLA-AFASVFIWQRNAVVGGFSFLRWGV--ASRPIPRL--RPAAFNLTDFGGV 85
K LFT+ LA +FA+ +W G F +++ + +PI F++ ++G V
Sbjct: 3 KFLFTIGLLAVSFAT--LW------GQFKYVKVDAPFSMKPIKEFIYPDQDFSIVNYGAV 54
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
G ++A A+ A ++ GGG++ +P G WLT P +L S++ L+LA+ A + +
Sbjct: 55 KGGEADVSDAIAGAITACNQ---AGGGRVVIPEGEWLTGPIHLKSNVNLYLAEGAVLRFM 111
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK---- 201
+N ++ +P + + G E + + I+ K+V ITG G ++ + W K
Sbjct: 112 DNPSHY--LPAVMTSWEGMECYN--YSPLIYAFECKNVAITG-TGMLSPKMNCWKKWFAR 166
Query: 202 ---------------------KYRQKLL--NNTRGPLVQIMWSSDILISNITLRDSPFWT 238
+ RQ + N+ R L+ ++L+ + +R+SPFWT
Sbjct: 167 PKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSFKIRESPFWT 226
Query: 239 LHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+H Y C +RN + I L + + ++EDC GDDA+ IK+G ++
Sbjct: 227 IHMYMCNGGIVRNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAW 285
Query: 292 AYGRPSMNILIRN 304
P+ NI+IRN
Sbjct: 286 RLNTPTENIVIRN 298
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 41/268 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFNL 128
P + +N+TD+G D + A + AI+K + GGG + +P G + + L
Sbjct: 42 PTFPDSTYNVTDYGAKNDTAFDSRPAI---LEAINKCNQNGGGTVLIPAGNYFIKGAITL 98
Query: 129 TSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S++ L + + A + + Y P++ L + G E + FI+ +V +TG
Sbjct: 99 KSNVNLHIVEGARLEFSTAASDYLPMV--LTKW-EGTECF--NYTPFIYAYQCTNVALTG 153
Query: 188 HNGTINGQG----QAWWKK-------YRQKLLNNT-------------RGPLVQIMWSSD 223
GT++G G W K RQ +++ R ++Q +
Sbjct: 154 K-GTLDGNGAVTFNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKN 212
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISVGD 277
+L+ ++ + DSPFW +HP C NVT+RN +I +SC +++IE+ +VGD
Sbjct: 213 VLVEDVRIFDSPFWIIHPVFCNNVTVRNIYIDSNNYNNDGCDPESCTNVLIENMDFNVGD 272
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNL 305
D IAIKSG DQ G G+ + N++IRN
Sbjct: 273 DGIAIKSGRDQDGWRIGQATENVIIRNC 300
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 76/288 (26%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P++ +F ++ +GGV G NTEAF++A I L KKGGG+L VP G WLT
Sbjct: 35 MPQVAETSFAANTVSIIQYGGVAGGSVKNTEAFRKA---IDDLSKKGGGKLVVPRGMWLT 91
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
P L S++ L + + A I+ +++ +PL+ + G + R S + +N ++
Sbjct: 92 GPIELKSNINLHVEEGAFIIFSKDKNDYPLV-DVSFEGL----NTIRCQSPVSARNATNI 146
Query: 184 VITGHNGTINGQGQAW------------WKK--------------------YRQKLLNNT 211
ITG G I+G G AW WK+ Y++ +++
Sbjct: 147 AITGK-GVIDGSGDAWRAIKKGKVSESEWKEITASGGILSSDGKTWYPSESYKKGFESSS 205
Query: 212 --------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDC-----KN 246
R +V ++ +L+ T ++SP W LHP C KN
Sbjct: 206 SFNVPDRISKEELKSVKDFLRPVMVSLVGCDKVLLDGPTFQNSPAWNLHPLMCSNVILKN 265
Query: 247 VTIRNAFISK----IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
+T+RN + S+ + L +SC++++I + VGDDAI IKSG ++ G
Sbjct: 266 LTVRNPWFSQNGDGVDL-ESCKNVLIYNNTFDVGDDAICIKSGKNEDG 312
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A +K GGG++ VP G WLT P + S++ L L
Sbjct: 44 FKITDFGAVPGGEVNNTQAIAAAIDACNK---AGGGRVVVPAGTWLTGPVHFKSNVNLCL 100
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
++A + +N + + +P + + G E + + ++ ++V I+G GT+
Sbjct: 101 EENAVLSFTDNPEDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAISG-KGTLQPKM 155
Query: 194 GQGQAWWKK----------------------YRQKLL--NNTRGPLVQIMWSSDILISNI 229
G + W+K+ RQ + N+ R L+ ++++
Sbjct: 156 GTWKVWFKRPAPHLEALKDLYTKASTNVPVIERQMAVGENHLRPHLIHFNRCKNVMLDGF 215
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 216 KIRESPFWTIHLYMCDGGMVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 275
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IRN
Sbjct: 276 AGRNQDAWRLNTPCENIVIRNC 297
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
VA +P F++ DFG GDG T NT A ++A I +GGG + VP G ++T
Sbjct: 44 VARTKLPVFPDRTFSILDFGARGDGKTDNTAAIRKA---IETANARGGGHVVVPRGTFVT 100
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLKD 182
L S + L LA A + + +P + L Y G + P I+ +
Sbjct: 101 GAVYLKSDVDLHLAAGAVLAFDSDASKFPNV--LTRYEGIECVNRSP----MIYAYKESN 154
Query: 183 VVITGHNGTINGQGQAWWKK-----YRQKLL---------------NNTRGPLVQIMWSS 222
+ +TG GT++ G A W K Y + L+ + R V+
Sbjct: 155 IAVTGQ-GTLDAAGTASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCD 213
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFD--SCEDMVIEDCYIS 274
+LI ITL++ FW LHP C+NVTI S D SC+ +VI + ++
Sbjct: 214 TVLIQGITLKNPMFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLG 273
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD IA+KSG D G G P NI++ N V+
Sbjct: 274 AHDDNIALKSGRDADGRRVGVPCRNIVVANCVM 306
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 9 RFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRP 68
++ L+ N DL + K +FT+ L + +N + G A
Sbjct: 29 KYLLYLNSTDLGKV-------DKNVFTIKNLDPDKEYSVSIKN--------IETGDADEI 73
Query: 69 IPRLRP--AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
+ R +P A N+ DFG GDG ++T + Q A+ + GG++ P G +LT P
Sbjct: 74 VLRTKPETAYINVRDFGANGDGKRIDTFSIQAAIISCPD-----GGRVFFPEGIYLTYPL 128
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPP-------LPSYGYGREHHGPR-FGSFIHGQ 178
L S++TL L A +L + + +P++P SY E F S I G
Sbjct: 129 FLKSNITLELGKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGI 188
Query: 179 NLKDVVITGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPF 236
+++V I G GTI+G WW + K + R + + ++LI IT+++SP
Sbjct: 189 GVENVNIIGE-GTIDGNSSFDTWWHDAKVKRI-AWRPRTIFLNKCKNVLIEGITIKNSPS 246
Query: 237 WTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
WT+HP +N+ N I + +SC+D+VI SVGDD IAIKSG
Sbjct: 247 WTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLA 306
Query: 289 YGIAYGRPSMNILIRNLVVR 308
S N+ IRN ++
Sbjct: 307 TSRKLPVSSENLYIRNCLME 326
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
IP + F ++ DFG +NT A +A+ A+S+ GGG++ +P G W+T
Sbjct: 13 IPHVEQPTFANYEVSIIDFGAQCGPDHVNTMAINQAIKAVSQ---HGGGKVIIPAGYWMT 69
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+ S++ L+L +A + N + L+ + P I G +L+++
Sbjct: 70 GAIEMQSNVNLYLDYNAFVSFTTNISDYRLVDTDFEGSPSKRCIAP-----ISGTHLQNI 124
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLN---------------------------NTRGPLV 216
ITGH G +G G+ W R KL + N R L+
Sbjct: 125 AITGH-GVFDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLL 183
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK--------IQLFDSCEDMVI 268
++ + +T ++SP W +HP C+NVTI N ++ +SC+++VI
Sbjct: 184 NFTSCKNVKLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVI 243
Query: 269 EDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ GDDAI IKSG ++ G G P N+ I+N V
Sbjct: 244 INSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKNNTV 282
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 26/253 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDG +T+ Q A+ A K + + +P G + L S++ L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAILACPKESR-----VLIPKGSYRITSLFLKSNLRLE 136
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVIT 186
LA AE++A + +P P + SY E++ P F I G ++++V+I
Sbjct: 137 LAKGAELIADTDRAVYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLIY 196
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GTING + WWK + ++ R L + ++ + +T ++SP WTLHPY
Sbjct: 197 GR-GTINGNASKENWWKNPKV-MVGAFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFS 254
Query: 245 KN-----VTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
N +TI N S D SC+++ I S+GDD IA+KSG G Y P
Sbjct: 255 DNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTP 314
Query: 297 SMNILIRNLVVRS 309
S NI IR ++ +
Sbjct: 315 SENIHIRQCLMEN 327
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGGVGDGVTLNT-EAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+++TDFG D ++ EA +A+ S GGG + VP G + T P L S++
Sbjct: 47 TYHITDFGAKADNESVPCHEAINQAILQCSL---TGGGTVIVPKGTFYTGPITLKSNVNF 103
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + + ++ + P + + G + + R + +G+ ++ ITG GTI+G
Sbjct: 104 HLEEGAVLKFLTDQSLY--FPGVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDG 158
Query: 195 QG--QAWW-----KKY-------------RQKLL-----------------NNTRGPLVQ 217
QG WW KY R++LL + R L+
Sbjct: 159 QGSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI ++TL +SPFW +HP C+++ +R + +F +SC+++
Sbjct: 219 LYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRG-----VNIFNRGPNGDGCDPESCKNV 273
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG + G + PS NI++RN +++
Sbjct: 274 LIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKN 316
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G T+NTEA +A+ A +K GGG++ +P G WLT P + S++ L L
Sbjct: 52 FSIVDYGAVKGGETVNTEAIAKAIAACNK---AGGGRVVIPEGEWLTGPVHFQSNVNLHL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN--GTING 194
++A + +N + +P + + G E + + ++ + +++ ITG I
Sbjct: 109 EENAILRFTDNPSDY--LPAVMTSWEGMECYN--YSPLLYAMDCENIAITGKGTLAPIMD 164
Query: 195 QGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNIT 230
+ W+K+ RQ K N+ R L+ ++L+
Sbjct: 165 TWKIWFKRPKPHMDALKELYTMASTDVPVEQRQMAKGENHLRPHLIHFNRCKNVLLDEFK 224
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C +RN + I L + + +IE+C GDDA+ IK
Sbjct: 225 IRQSPFWTVHLYMCDGGIVRNLDVKAHGHNNDGIDL-EMSRNFLIENCVFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI++R+
Sbjct: 284 AGRNQDAWRLNTPCENIVVRHC 305
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 56/313 (17%)
Query: 31 KTLFTVLWLA-AFASVFIWQRNAVVGGFSFLRWGV--ASRPIPRL--RPAAFNLTDFGGV 85
K LFT+ LA +FA+ +W G F +++ + +PI F++ ++G V
Sbjct: 3 KFLFTIGLLAVSFAT--LW------GQFKYVKVDAPFSMKPIKEFIYPDQDFSIVNYGAV 54
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
G ++A A+ A ++ GGG++ +P G WLT P +L S++ L+LA+ A +
Sbjct: 55 KGGEADVSDAIAGAIAACNQ---AGGGRVVIPEGEWLTGPIHLKSNVNLYLAEGAVLRFT 111
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK---- 201
+N ++ +P + + G E + + I+ K+V ITG G ++ + W K
Sbjct: 112 DNPSHY--LPAVMTSWEGMECYN--YSPLIYALECKNVAITG-TGLLSPKMDCWKKWFAR 166
Query: 202 ---------------------KYRQKLL--NNTRGPLVQIMWSSDILISNITLRDSPFWT 238
+ RQ + N+ R L+ ++L+ + +R+SPFWT
Sbjct: 167 PKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSFKIRESPFWT 226
Query: 239 LHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+H Y C +RN + I L + + ++EDC GDDA+ IK+G ++
Sbjct: 227 IHMYMCNGGIVRNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAW 285
Query: 292 AYGRPSMNILIRN 304
P+ NI+IRN
Sbjct: 286 RLNTPTENIVIRN 298
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 54/286 (18%)
Query: 62 WGVASRPIPRLRPAA-FNLTDFGGVGDGVTLNTEAFQRAVY-AISKLGKKGGGQLNVPPG 119
+G + +P + + +TD+G + + + +A RA+ AI + +GGG++ +P G
Sbjct: 36 FGAVTVKVPDFSQSNRYYITDYGALPN----DQKATSRAIMDAIKEAHAQGGGRVVIPKG 91
Query: 120 RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQN 179
WLT +L S++ L L A +L +N + + +P + S G E + I+
Sbjct: 92 EWLTGKIHLKSNINLHLEQGAVLLFSDNPQDY--LPAVHSSWEGLECFN--YSPLIYAYK 147
Query: 180 LKDVVITGHNGTINGQGQAWWKKY------------------------RQKLLN---NTR 212
K++ ITG G + + W + +++++N N R
Sbjct: 148 CKNIAITGQ-GELKAKMDTWRSWFDRPPGHMNSLKELYHMAANNVPVEQRQMVNDSANLR 206
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------D 261
+Q S +IL+ +T+ +SPFW +HPY KNV+I+ ++ +F +
Sbjct: 207 PQFIQFNRSENILLQGVTITNSPFWVIHPYLSKNVSIK-----EVTVFAHGHNNDGVDPE 261
Query: 262 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
++++IE+C GDDAIA+KSG +Q P+ NI+I+N +
Sbjct: 262 MSQNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKI 307
>gi|189465175|ref|ZP_03013960.1| hypothetical protein BACINT_01520 [Bacteroides intestinalis DSM
17393]
gi|189437449|gb|EDV06434.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 474
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 128/239 (53%), Gaps = 30/239 (12%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNL 128
P+ +N+ D+G GDGVT + A Q AI++ K GGG + VP GR ++ +PF+L
Sbjct: 22 PKTGGTVYNIMDYGAKGDGVTDDAAAIQT---AINQCSKSGGGTVLVPAGRTFMCSPFHL 78
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L L ++ +LA +E + L + G G +I+GQ+LK+V ITG
Sbjct: 79 ASFVELHLEPNSCLLANPDEAAYTLSAFRDNRGEGM--------MWIYGQDLKEVSITG- 129
Query: 189 NGTINGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
GTI+G G ++ K Y K + + R ++ ++ +I ++T+R+S +WT+H
Sbjct: 130 TGTIDGNGVSFMGKELEDSYELKPVTDFDPRPHVLTLINIEKTVIRDVTIRNSAYWTVHL 189
Query: 242 YDCKNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
C + +I + ++ +++ D +++ I +C+I GDD I +K+ +++YG
Sbjct: 190 IGCNDASIDGISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYG 248
>gi|423222160|ref|ZP_17208630.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392643384|gb|EIY37135.1| hypothetical protein HMPREF1062_00816 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 432
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+ + +TD G V D L TE Q I + KGGG + +P G +L+ L
Sbjct: 45 SKYKITDHGVVNDSTLLQTEKIQAV---IDQASSKGGGVIIIPKGTYLSGALFFKPKTHL 101
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+L + A + ++ +P++ G ++ F + ++ + I+G GTING
Sbjct: 102 YLEEGAVLKGSDDISNFPIINTRIE-GQSLKY----FAALVNADKVDGFTISGK-GTING 155
Query: 195 QGQAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G +WK + + ++ R LV I S+D+ +S + L +SPFWT H Y C N
Sbjct: 156 NGLRYWKSFWLRRTVIPKCTNMDELRPRLVHISNSNDVQLSGVRLINSPFWTTHIYKCNN 215
Query: 247 VTIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
V + +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 216 VKLLGLYIFSPAAPVKAPSTDAIDIDVCNNVLVKNCYLSVNDDAIALKGG 265
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 26/253 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDG +T+ Q A+ A K + + +P G + L S++ L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAILACPKESR-----VLIPKGSYRITSLFLKSNLRLE 136
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVIT 186
LA AE++A + +P P + SY E++ P F I G ++++V+I
Sbjct: 137 LAKGAELIADTDRAAYPKFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENVLIY 196
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GTING + WWK + ++ R L + ++ + +T ++SP WTLHPY
Sbjct: 197 GR-GTINGNASKENWWKNPKV-MVGAFRPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFS 254
Query: 245 KN-----VTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
N +TI N S D SC+++ I S+GDD IA+KSG G Y P
Sbjct: 255 DNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTP 314
Query: 297 SMNILIRNLVVRS 309
S NI IR ++ +
Sbjct: 315 SENIHIRQCLMEN 327
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 56/313 (17%)
Query: 31 KTLFTVLWLA-AFASVFIWQRNAVVGGFSFLRWGV--ASRPIPRL--RPAAFNLTDFGGV 85
K LFT+ LA +FA+ +W G F +++ + +PI F++ ++G V
Sbjct: 3 KFLFTIGLLAVSFAT--LW------GQFKYVKVDAPFSMKPIKEFIYPDQDFSIVNYGAV 54
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
G ++A A+ A ++ GGG++ +P G WLT P +L S++ L+LA+ A +
Sbjct: 55 KGGEADVSDAIAGAIAACNQ---AGGGRVVIPEGEWLTGPIHLKSNVNLYLAEGAVLRFT 111
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK---- 201
+N ++ +P + + G E + + I+ K+V ITG G ++ + W K
Sbjct: 112 DNPSHY--LPAVMTSWEGMECYN--YSPLIYALECKNVAITG-TGLLSPKMDCWKKWFAR 166
Query: 202 ---------------------KYRQKLL--NNTRGPLVQIMWSSDILISNITLRDSPFWT 238
+ RQ + N+ R L+ ++L+ + +R+SPFWT
Sbjct: 167 PKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSFKIRESPFWT 226
Query: 239 LHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+H Y C +RN + I L + + ++EDC GDDA+ IK+G ++
Sbjct: 227 IHMYMCNGGIVRNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAW 285
Query: 292 AYGRPSMNILIRN 304
P+ NI+IRN
Sbjct: 286 RLNTPTENIVIRN 298
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A ++ GGG++ VP G WLT P + S++ L+L
Sbjct: 53 FIITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 110 EENAVLNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITGK-GTLQPKM 164
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 165 DTWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGF 224
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+ +SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 225 KICESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 284
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 285 AGRNQDAWRLNTPCENIVIRNCQI 308
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 19 LRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFN 78
+R+ V + LF V A +Q G F + IP L +
Sbjct: 1 MRKLVKLIMLVFVILFVVFPCKAEGYGKYYQ------GLPFDIPKAVTPAIPELE---VS 51
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
L ++GG+G+G+TLNT+AF AI+ L ++GGG L VP G WLT P L S++ L +
Sbjct: 52 LAEYGGIGNGMTLNTQAF---AAAIADLSERGGGHLIVPEGIWLTGPIVLKSNIDLHVLK 108
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH---------- 188
+A +L ++ +PL+ P G R S I + + ITG
Sbjct: 109 NAIVLFTPDKTQYPLLSP------DEGTSGSRCQSPISAYHESNFSITGEGVFDGNGELW 162
Query: 189 -------------------NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNI 229
GT+ G W+ + + L R +V+ + +L+ +
Sbjct: 163 RPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQGV 222
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAI 280
++SP + ++ N+ + + I L SC + +I +C + GDDAI
Sbjct: 223 VFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDL-SSCTNALIVNCAVDAGDDAI 281
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVV 307
+KSG G G P NI+I N V
Sbjct: 282 CLKSGIGDVGRRRG-PCANIIIDNCTV 307
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 60/279 (21%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG D T ++ + AI GGG + VP G + T P L S++ + +
Sbjct: 71 ITDFGAKPD--TPDSPCHEEINRAIVTCSLNGGGTVIVPKGTFYTGPITLKSNVNFHVEE 128
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-- 196
A + ++ + P + + G + + R + +G+ ++ ITG GTI+GQG
Sbjct: 129 GATLKFSTDQSLY--FPGVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDGQGSK 183
Query: 197 QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQIMWS 221
+ WW +Y R++LL + R LV +
Sbjct: 184 ETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMKPEDGLRPQLVNLYSC 243
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIED 270
+ +LI +ITL +SPFW +HP C+++T+R +++F +SC++++IE+
Sbjct: 244 NTVLIEDITLLNSPFWVIHPLFCESLTVRG-----VKVFNRGPNGDGCDPESCKNVLIEN 298
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C GDD IAIKSG + G + PS NI++RN +++
Sbjct: 299 CTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKN 337
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 118/250 (47%), Gaps = 35/250 (14%)
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
GDG T + A QRA+ +S GGG++ PG +LT L S +TL + + E+ I
Sbjct: 14 GDGRTDCSNAIQRAIDTVSA---SGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELRGI 70
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY-- 203
+E +P + + G E P + GQ +V ITG GTI+GQG WW KY
Sbjct: 71 IDETAYP---DIWTRVAGIEMEWPAGLINVIGQ--ANVTITGK-GTIDGQGFYWWNKYWG 124
Query: 204 ----------------RQKLLNNTRGPL-VQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
R + + + P + I SS + + ++TLR SPFW +H +
Sbjct: 125 EDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTD 184
Query: 247 VTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
V + I + DS +++IE+C I DD I IK+G D G+ RPS N
Sbjct: 185 VYVSGLVIKDNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSEN 244
Query: 300 ILIRNLVVRS 309
I++RN + S
Sbjct: 245 IVVRNCSIGS 254
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 29/251 (11%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P P L PAA + D N F +VY P + A
Sbjct: 24 PEPIL-PAAELTKNLQNQIDKCIANNPTFHISVY--------------FPAEKIEIASLE 68
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGRE----HHGPRFGSFIHGQNLKDV 183
L S++TL EI+A NE + +MP LPSY R+ + S +G+N+++V
Sbjct: 69 LRSNLTLNFPKGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGENVENV 128
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
V TG G ING+G WW + Q L R L Q ++ + I +T ++SPFWT+H
Sbjct: 129 VFTGE-GLINGEGVNWWTRNSQNL-KFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVY 186
Query: 244 CKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
+N+ I + I DS ++ I D ++ VGDD IA+KSG+D G +G
Sbjct: 187 SENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVGDDVIALKSGFDFCGREFGM 246
Query: 296 PSMNILIRNLV 306
P+ N+L+ N V
Sbjct: 247 PTKNVLVENSV 257
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ ++G + D T+A Q A+ ++ G G + VP GR+ T P + TL L
Sbjct: 9 FDIREYGAISDSDDPATDAIQTALDECAETG----GTVYVPAGRFRTGPLRIGDRTTLHL 64
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + + + + P + S G +G F + + ++V I+G GTI+G G
Sbjct: 65 DPGATLTFVGD---YDAFPTVESRWEGWNQYG--FHPCLWVTDAENVEISGR-GTIDGNG 118
Query: 197 QAWWKKY-----------RQKLLN--------------NTRGPLVQIMWSSDILISNITL 231
Q WW+ Y R++L R PL QI S ++ +S +TL
Sbjct: 119 QYWWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTL 178
Query: 232 RDSPFWTLHPYDCKNVTIRNAFI----------SKIQLFDSCEDMVIEDCYISVGDDAIA 281
++SPFW H +NVTI + + I + DS + I D YI+ GDDAI
Sbjct: 179 QNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDI-DSSRYVRISDAYINAGDDAIC 237
Query: 282 IKSGWDQYGIAYGRPSMNILIRNLVVRS 309
IKSG + G G P+ I + N V +
Sbjct: 238 IKSGKNAEGREVGEPASQITVTNCTVEA 265
>gi|326799885|ref|YP_004317704.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550649|gb|ADZ79034.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 457
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 31/278 (11%)
Query: 30 HKTLFTVLWLAA--FASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAA-FNLTDFGGVG 86
+K+L VL+L A A + N G +W + +P + + +TDFG
Sbjct: 18 YKSLSFVLFLLAPFIALAQDTEGNLFPDGTKIPKWFSDTSKVPLEKLGKPYVITDFGVSA 77
Query: 87 DGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE 146
D + T+A Q+ I + + GGG + VP G +++ L++AD A + +
Sbjct: 78 DSTIVQTKAIQQV---IDRAAENGGGVIIVPKGTFMSGALFFKPKTHLYVADRAVLKGSD 134
Query: 147 NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQK 206
N +P +PS G+ F + I+ + I+G NG I+G G +W+ + ++
Sbjct: 135 NIADYP---KIPSRMEGQNLD--YFAALINAYGVNGFTISG-NGVIDGNGLRYWEAFWKR 188
Query: 207 LLNN--------TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ 258
N +R LV I +D+ + ++ LR++ FW+ H Y C NV I N I+
Sbjct: 189 REENPKCTNLEVSRPRLVFIWKCNDVQVQDVKLRNAGFWSSHYYQCHNVKILNVRITSPH 248
Query: 259 L-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
D C +++++ CY+SV DDAIA+K G
Sbjct: 249 APVKAPSTDAIDLDVCTNVLVKGCYLSVNDDAIALKGG 286
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 73/300 (24%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + FN+ F GDG+TLNT + A+ + S+ KGGG + VP G WLT P +L
Sbjct: 33 PAFKTDTFNIKQFDAKGDGLTLNTNSINDAITSCSE---KGGGVVLVPGGVWLTGPIDLK 89
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L + D +L ++ +P++ G R S I G++L+++ ITG
Sbjct: 90 SNVNLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-T 143
Query: 190 GTINGQGQAWWKKYRQKLLNNT-------------------------------------- 211
G I+G G A W+ ++ L T
Sbjct: 144 GIIDGNGDA-WRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILK 202
Query: 212 ---------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
R +V + IL+ +T ++SP W LHP+ C ++T+R +
Sbjct: 203 EGRSIQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKN 262
Query: 257 ---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
I L +S + +IE+ VGDD I IKSG D+ G G+P+ N+++RN VV
Sbjct: 263 PWYAQNGDGIDL-ESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVV 321
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ DFG V G+ NT++ A+ A K GGG++ +P G WLT P +L S++ L+L
Sbjct: 51 FSVVDFGAVKGGIADNTKSITAAINACHK---AGGGRVVIPEGEWLTGPVHLKSNVNLYL 107
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+++A + +N + +P + + G E + + ++ ++V ITG G + +
Sbjct: 108 SENAVLCFTDNPSDY--LPAVMTSWEGMECYN--YSPLVYAVGCENVAITG-KGMLKPKM 162
Query: 197 QAW--W-----------------------KKYRQKLL--NNTRGPLVQIMWSSDILISNI 229
W W + RQ + NN R L+ ++L+
Sbjct: 163 DTWKVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGF 222
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R+SPFWT+H Y C RN + I L + + ++EDC GDDA+ I
Sbjct: 223 KIRESPFWTIHIYMCDGGIARNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVI 281
Query: 283 KSGWDQYGIAYGRPSMNILIRN 304
K+G ++ P+ NI+IRN
Sbjct: 282 KAGRNRDAWRLNIPTENIVIRN 303
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 56/313 (17%)
Query: 31 KTLFTVLWLA-AFASVFIWQRNAVVGGFSFLRWGV--ASRPIPRL--RPAAFNLTDFGGV 85
K LFT+ LA +FA+ +W G F +++ + +PI F++ ++G V
Sbjct: 3 KFLFTIGLLAVSFAT--LW------GQFKYVKVDAPFSMKPIKEFIYPDQDFSIVNYGAV 54
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
G ++A A+ A ++ GGG++ +P G WLT P +L S++ L+LA+ A +
Sbjct: 55 KGGEADVSDAIAGAITACNQ---AGGGRVVIPEGEWLTGPIHLKSNVNLYLAEGAVLRFT 111
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK---- 201
+N ++ +P + + G E + + I+ K+V ITG G ++ + W K
Sbjct: 112 DNPSHY--LPAVMTSWEGMECYN--YSPLIYAFECKNVAITG-TGMLSPKMDCWKKWFAR 166
Query: 202 ---------------------KYRQKLL--NNTRGPLVQIMWSSDILISNITLRDSPFWT 238
+ RQ + N+ R L+ ++L+ + +R+SPFWT
Sbjct: 167 PKAHMDALRKLYTMASKDVPVEKRQMAVGENHLRPHLIHFNRCENVLLDSFKIRESPFWT 226
Query: 239 LHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+H Y C +RN + I L + + ++EDC GDDA+ IK+G ++
Sbjct: 227 IHMYMCNGGIVRNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAW 285
Query: 292 AYGRPSMNILIRN 304
P+ NI+IRN
Sbjct: 286 RLNTPTENIVIRN 298
>gi|224538847|ref|ZP_03679386.1| hypothetical protein BACCELL_03743, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224519522|gb|EEF88627.1| hypothetical protein BACCELL_03743 [Bacteroides cellulosilyticus
DSM 14838]
Length = 436
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD G V D L TE Q I + KGGG + +P G +L+ L+L
Sbjct: 51 YKITDHGVVNDSTLLQTEKIQAV---IDQASSKGGGVIIIPKGTYLSGALFFKPKTHLYL 107
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + ++ + I+G GTING G
Sbjct: 108 EEGAVLKGSDDISNFPIINTRIE-GQSLKY----FAALVNADKVDGFTISGK-GTINGNG 161
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + + ++ R LV I S+D+ +S + L +SPFWT H Y C NV
Sbjct: 162 LRYWKSFWLRRTVIPKCTNMDELRPRLVHISNSNDVQLSGVRLINSPFWTTHIYKCNNVK 221
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 222 LLGLYIFSPAAPVKAPSTDAIDIDVCNNVLVKNCYLSVNDDAIALKGG 269
>gi|340619595|ref|YP_004738048.1| polygalacturonase [Zobellia galactanivorans]
gi|339734392|emb|CAZ97769.1| Polygalacturonase, family GH28 [Zobellia galactanivorans]
Length = 462
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 38/257 (14%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
+ + TDFG + +G T+NTEA QRA+ A + + GGG + + G +++ L +
Sbjct: 23 KSDVYKATDFGAIANGKTVNTEAIQRAIDACN---EGGGGTVILDKGDYVSGTLLLKDKV 79
Query: 133 TLFLADDAEILAIENE-KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
TL +A+DA+++ N Y + + G R + I +N ++ +TG GT
Sbjct: 80 TLHIAEDAQLIGSSNPLDYQSIDTFTDATGQKRGN------CLIGAKNATNIAVTGK-GT 132
Query: 192 INGQGQAWWK---KYRQKLLN--------NTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
I+G G+A+ K + K LN + R L++ + SS I + ++ LR WT H
Sbjct: 133 IDGNGEAFLAKNIKAKIKELNLAQTEGFGSNRPFLLRFVNSSQIKVQDVHLRQPAAWTCH 192
Query: 241 PYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
Y ++ + N I I L DS D +I++C I+ GDDAI IK+
Sbjct: 193 FYQSNDILVENVSIYSHAHKNNDGIDL-DSSYDAIIKNCDINTGDDAICIKT-------T 244
Query: 293 YGRPSMNILIRNLVVRS 309
+P+ N+ + + +RS
Sbjct: 245 SPKPTYNVQVSDCKLRS 261
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 117/263 (44%), Gaps = 62/263 (23%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
N +A RA+ A++ + KGGG + VP G W T L SH+ L + + A + + +
Sbjct: 80 NQKAINRAI-AVASM--KGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLY 136
Query: 152 PLM----PPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWW----- 200
PL+ L Y Y I+ D+ ++G GTI+G G WW
Sbjct: 137 PLVRTAWEGLECYNYS---------PCIYAYGATDIAVSGK-GTIDGGGSNDTWWAWNGN 186
Query: 201 ----------------------KKY-------RQKLLNNTRG---PLVQIMWSSDILISN 228
+KY ++ RG L+ M ILI +
Sbjct: 187 PRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRD 246
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAI 282
+ + +SPFW +HP KN+T+ N +I ++CE+++I++C GDD IAI
Sbjct: 247 VKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGDDCIAI 306
Query: 283 KSGWDQYGIAYGRPSMNILIRNL 305
KSG + G +G+PS NI+IRN
Sbjct: 307 KSGRNNDGRLWGKPSKNIIIRNC 329
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 73/295 (24%)
Query: 66 SRPIPRLRPAAFNLTDFGGVGDG-VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
S +P+++ + +T +G N +A R + SK KGGG + +P G + T
Sbjct: 34 SVKLPQIKGKDYVVTKYGASEKASAAANQKAINRVIAMASK---KGGGNVIIPKGTYSTG 90
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLM----PPLPSYGYGREHHGPRFGSFIHGQNL 180
+ SH+ L + + A + K +PL+ L + Y I+
Sbjct: 91 AITMLSHVNLVVEEGATLHFAFEPKLYPLVRTSWEGLACWNYS---------PCIYAYKA 141
Query: 181 KDVVITGHNGTINGQG--QAWW--------------KKYRQKLLNNT------------- 211
D+ ITG GTI+G G WW K QKL +
Sbjct: 142 TDIAITGK-GTIDGGGSNDTWWPMNGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFD 200
Query: 212 ----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF- 260
R L+ + S +ILI ++TL SPFW +HP CKN+T+ +Q++
Sbjct: 201 ERKFGMGQGLRPQLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITV-----DGVQIWN 255
Query: 261 ----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
++CE+++I++ GDD IAIKSG + G +G+PS NI+IRN
Sbjct: 256 EGPNGDGCDPEACENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNC 310
>gi|325106323|ref|YP_004275977.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975171|gb|ADY54155.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 523
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 30/231 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ DFG VGDG+TLNT Q+ AI K GGG++ P GR+L+ L ++TL
Sbjct: 25 YNIKDFGAVGDGITLNTLFIQK---AIDKCNNDGGGKVIFPAGRFLSGTVELKDNVTLHF 81
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNGTINGQ 195
+AE++ + K + + P E G G + + + K++ + G G I+GQ
Sbjct: 82 EKNAELVGSTDLKDYRNLDPFT------EGLGIDVGWALLVAVDAKNIGLEGE-GVIDGQ 134
Query: 196 GQAWWKKYRQKLLNNTRGP---------LVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G A +K+ +L +TR L++I+ +++ + ++TL+ + WT H + +
Sbjct: 135 GTALKEKH---ILTDTRPEGKRWGLRPFLLRIVRCTNVNVKDVTLKYAGAWTSHYFQSRK 191
Query: 247 VTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
+ I N I I + D C+++ I+ C + GDDA+ K+ + G
Sbjct: 192 INIENVTIRSIGVAHNDGIGIDGCQEVRIKGCDVVSGDDALVFKTTSSKMG 242
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+ N+ FG GDGV+ +T A Q A+ + + G++ +P G++L L
Sbjct: 75 EIESFTLNVKRFGAKGDGVSNDTLALQTAIMSCPE-----NGRVYIPKGKYLITSLFLKD 129
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH------GP--RFGSFIHGQNLKD 182
++T+ L + AE+L + + ++P L E++ P F S I G N+K+
Sbjct: 130 NLTIELGEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKN 189
Query: 183 VVITGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
V I G G +NGQ + WWK + K + R + + +++I I + +SP WT+H
Sbjct: 190 VRIIGR-GCLNGQASKENWWKNPKVKNIA-WRPRSIFLNSCENVVIEGIKIMNSPSWTIH 247
Query: 241 PYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
P+ N+ N I +SCE++ SVGDD IAIKSG G
Sbjct: 248 PFLTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKV 307
Query: 293 YGRPSMNILIRNLVVR 308
+PS N +I+N ++
Sbjct: 308 LNKPSKNFIIKNCSMK 323
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 117/263 (44%), Gaps = 62/263 (23%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
N +A RA+ A++ + KGGG + VP G W T L SH+ L + + A + + +
Sbjct: 50 NQKAINRAI-AVASM--KGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLY 106
Query: 152 PLM----PPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWW----- 200
PL+ L Y Y I+ D+ ++G GTI+G G WW
Sbjct: 107 PLVRTAWEGLECYNYS---------PCIYAYGATDIAVSGK-GTIDGGGSNDTWWAWNGN 156
Query: 201 ----------------------KKY-------RQKLLNNTRG---PLVQIMWSSDILISN 228
+KY ++ RG L+ M ILI +
Sbjct: 157 PRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERILIRD 216
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAI 282
+ + +SPFW +HP KN+T+ N +I ++CE+++I++C GDD IAI
Sbjct: 217 VKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGDDCIAI 276
Query: 283 KSGWDQYGIAYGRPSMNILIRNL 305
KSG + G +G+PS NI+IRN
Sbjct: 277 KSGRNNDGRLWGKPSKNIIIRNC 299
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 38/250 (15%)
Query: 88 GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN 147
G L TEA Q + S+ GG L + G +LTAP L + M + A + +
Sbjct: 16 GERLVTEALQALIDETSQ----AGGILVLEKGTYLTAPLFLKNGMEFHFEEGAVLKGTTD 71
Query: 148 EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY---- 203
E P++P + G G + + ++ KDV+I+G NGTI+GQG+ WW+KY
Sbjct: 72 ETKIPVIPTRAA-GIGMDW----YPGVLNCNGQKDVIISG-NGTIDGQGEYWWRKYWGDD 125
Query: 204 ---------RQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+K L + R V IM SS I + +IT S FW +H ++
Sbjct: 126 GKSGMRGEYDKKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIH 185
Query: 249 IRNAFISKIQ---------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
+ I+ DSC D+++E+C DD+I IKSG D GI RP +
Sbjct: 186 VDGIKIASCGGESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHD 245
Query: 300 ILIRNLVVRS 309
I ++N +R+
Sbjct: 246 ITVQNCEIRA 255
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 82 FGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAE 141
+G GDGVT +T A Q+A+ + G GG + +++ P L SH+TL +A
Sbjct: 28 YGATGDGVTKDTAAIQKAIDDCAAAG--GGTVVLAGAPMYVSGPLVLKSHITLSIATGTT 85
Query: 142 ILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWK 201
+ E +PL+ L G R+ + D+ I G GTI+G+GQ+WW
Sbjct: 86 LAGSEEHDDYPLIEELRESG--RQ-------PLLSSDKATDITING-GGTIDGRGQSWWP 135
Query: 202 KYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------- 254
+ N R L+ SS IL+ NIT+++SP W + PY ++ RN +
Sbjct: 136 ---DRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRVS 192
Query: 255 ---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I F S ++IE I GDD IAIKSG PS +I+IR+
Sbjct: 193 HNTDGIDPFSSSH-VLIEHVTIDTGDDNIAIKSGQPN-SPGGDEPSHDIVIRD 243
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 55/251 (21%)
Query: 102 AISKLGKKGGGQLNVP------PGRWLTAPFNLTSHMTLFLADDAEILAIENE--KYWPL 153
AI K GGG++ +P P + + L S++ L++ ++A I + N+ +++PL
Sbjct: 93 AIDDANKNGGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFLRNKSNRFYPL 152
Query: 154 MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW----WK-------- 201
+ Y F FI+ +++ I+G G ++G + WK
Sbjct: 153 V-----YTRWEGVEMMNFSPFIYSYEAENISISGK-GVLDGCADEFNWMPWKFGYFNEED 206
Query: 202 --KYRQKLLN-------------------NTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
R++L N R P +Q S +ILI +IT+ +SPFW ++
Sbjct: 207 QQIQRERLFNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDITILNSPFWEVN 266
Query: 241 PYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
P C+N+ I + + L+ +SC+DM+IEDC+ + GDD IAIKSG + G
Sbjct: 267 PVLCENIKIDSITVDS-HLYNNDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNI 325
Query: 294 GRPSMNILIRN 304
G PS NI+IRN
Sbjct: 326 GVPSQNIIIRN 336
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G T NT+A A+ A K GGG++ VP G WLT P + S++ L+L
Sbjct: 342 FVITDYGAKSGGETDNTKAIAAAIEACYK---AGGGRVVVPDGIWLTGPIHFKSNVNLYL 398
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
++A + +N K + +P + + G E + + ++ ++V I+G GT+
Sbjct: 399 EENAVLSFSDNPKDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAISG-KGTLQPKM 453
Query: 194 GQGQAWWKKYRQKL------------------------LNNTRGPLVQIMWSSDILISNI 229
G + W+K+ + L NN R L+ +I +
Sbjct: 454 GTWRVWFKRPQPHLEALKELYTKASTGVPVEERQMAVGENNLRPHLIHFNRCKNIQLEGF 513
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ ++ ++E+C GDDA+ IK
Sbjct: 514 RIRESPFWTIHIYMCDGGVVRNLDVRAHGHNNDGIDFEMSKNFLVENCSFDQGDDAVVIK 573
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 574 AGRNQDAWRLNTPCENIVIRNCQI 597
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 62/287 (21%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +L DFGG GDGVT+NTEAF + A+S+L KKGGG L+VP G +LT +
Sbjct: 41 LPTIPDNRVSLPDFGGKGDGVTMNTEAFGK---AMSELSKKGGGHLDVPAGVYLTGMISF 97
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
++ L L +A I+ ++ + + G + P I+ K++ ITG
Sbjct: 98 KDNIDLHLDKNAIIVLSPDKNDFIKI----ENGMKDDKATPG----INASKRKNISITGE 149
Query: 189 NGTINGQGQAWWKKYRQKLLNNT------------------------------------- 211
G I+G G+ WW+ ++ +++T
Sbjct: 150 -GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQ 207
Query: 212 ---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLF 260
R LV+ ++L+ +TL +SP + + P C NV I NA
Sbjct: 208 ERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDI 267
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
SC ++I + I GDD I +K+G G+ YG P N+LI N V
Sbjct: 268 SSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTV 313
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 62/287 (21%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +L DFGG GDGVT+NTEAF + A+S+L KKGGG L+VP G +LT +
Sbjct: 41 LPTIPDNRVSLPDFGGKGDGVTMNTEAFGK---AMSELSKKGGGHLDVPAGVYLTGMISF 97
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
++ L L +A I+ ++ + + G + P I+ K++ ITG
Sbjct: 98 KDNIDLHLDKNAIIVLSPDKNDFIKI----ENGMKDDKATPG----INASKRKNISITGE 149
Query: 189 NGTINGQGQAWWKKYRQKLLNNT------------------------------------- 211
G I+G G+ WW+ ++ +++T
Sbjct: 150 -GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQ 207
Query: 212 ---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLF 260
R LV+ ++L+ +TL +SP + + P C NV I NA
Sbjct: 208 ERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDI 267
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
SC ++I + I GDD I +K+G G+ YG P N+LI N V
Sbjct: 268 SSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTV 313
>gi|329955387|ref|ZP_08296295.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328525790|gb|EGF52814.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 432
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 44/236 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G V D L TE Q I + + GGG + VP G +L+ L++
Sbjct: 47 YTITDYGVVNDSTILQTEKIQAV---IDRAARNGGGVIVVPKGTFLSGSIFFKPRTHLYM 103
Query: 137 --------ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
+DD AI N + G ++ F + ++ + I+G
Sbjct: 104 EEGSVLKGSDDISNFAIVNTRI---------EGQSLKY----FAALVNADKVNGFTISGK 150
Query: 189 NGTINGQGQAWWKKY---RQKL-----LNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
GTING G +WK + RQ + ++ R L+ I S+D+ IS + L +SPFWT H
Sbjct: 151 -GTINGNGHRYWKSFWLRRQVIPKCTNMDELRPRLLYISNSNDVQISGVRLMNSPFWTTH 209
Query: 241 PYDCKNVTIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
Y C N+ + N I S D C ++++++CY+SV DDA+A+K G
Sbjct: 210 IYRCNNIKLLNLHIFAPAAPVKAPSSDAIDIDVCSNVLVKNCYMSVNDDAVALKGG 265
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 39/260 (15%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DF V D +L+T+A QRA+ + S G + +P GR+LT L S MTL
Sbjct: 2 ARINIIDFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTL 56
Query: 135 FLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LA DA +L + E Y P +P+ G + P + ++ + ++V + G +GT +
Sbjct: 57 ELAKDAMLLGSQRLEDY----PDIPTRVAGIDMVWP--AAMLNINHCRNVTVCG-SGTFD 109
Query: 194 GQGQAWWKK-------------YRQKLLN-----NTRGPLVQIMWSSD-ILISNITLRDS 234
GQG WW K Y ++ L + R P +++ S+ + + + T +DS
Sbjct: 110 GQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDS 169
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW LH K V ++ + DS + + +E C +S DD I +KSG
Sbjct: 170 GFWNLHVCYSKQVNLQRLRVMNATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRG 229
Query: 288 QYGIAYGRPSMNILIRNLVV 307
GR + +I+IR+ +
Sbjct: 230 AEAQQLGRTARDIIIRDCTL 249
>gi|398793179|ref|ZP_10553653.1| endopolygalacturonase [Pantoea sp. YR343]
gi|398211246|gb|EJM97867.1| endopolygalacturonase [Pantoea sp. YR343]
Length = 442
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 27/245 (11%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
+L DF + DG TL+T FQRA ++ L +GGG L+VPPGR+ L S++ L L
Sbjct: 4 SLADFYPIADGETLDTYCFQRA---LNHLASRGGGTLSVPPGRYHLGTLTLGSNINLHLE 60
Query: 138 DDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A +LA E Y + S +H ++ +++ I+G G I+G G
Sbjct: 61 AGATLLASSRIEDYQQQLA--QSQAELSQH------VLLYAAGQRNIRISG-KGVIDGNG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA 252
AW+ + +L R +V + + + T+ +P WT+H C++V I +
Sbjct: 112 DAWFAAEKDHQGYRLPRPQRPRIVVFEDCEQVTLEDFTIIQAPMWTVHLVSCRHVHIDHL 171
Query: 253 FISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
I DSCE + + + Y+S DDAI IK+ Q R + ILI N
Sbjct: 172 TIDNSMSMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--TQKPAHLRRAARQILISN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 50/273 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG D T + + AI GGG + VP G + T P L S++ F +
Sbjct: 50 ITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSNVN-FHVE 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-- 196
+ +L ++ P + + G + + R + +G+ ++ ITG GTI+GQG
Sbjct: 107 EGAVLKFSTDQSL-YFPGVITRWEGIDCYNARPLIYAYGET--NIAITGK-GTIDGQGSN 162
Query: 197 QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQIMWS 221
+ WW +Y R++LL + R L+ +
Sbjct: 163 ETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSC 222
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISV 275
+ +LI ++TL +SPFW +HP C+++T+R ++ +SC++++IE+C
Sbjct: 223 NTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRGPNGDGCDPESCKNVLIENCTFDT 282
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
GDD IAIKSG +Q G +G PS NI++R ++
Sbjct: 283 GDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMK 315
>gi|329961973|ref|ZP_08299984.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328530621|gb|EGF57479.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 432
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 28/230 (12%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+ +TD+G V D L TE Q + S+ KGGG + +P G +L+ L
Sbjct: 45 GKYRITDYGAVNDSTLLQTEKIQAVIDLASQ---KGGGVIIIPKGTFLSGSLFFKPRTHL 101
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+L + A + ++ + ++ G ++ F + ++ + I+G GTING
Sbjct: 102 YLEEGAMLKGSDDISNFAIVDTRIE-GQSLKY----FAALVNADRVDGFTISGK-GTING 155
Query: 195 QGQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G+ +WK + R+K+ ++ R L+ I S+D+ +S + +SPFWT H Y C N
Sbjct: 156 NGERYWKSFWLRRKVIPKCTNMDELRPRLIYISNSNDVQLSGVHFINSPFWTTHIYRCNN 215
Query: 247 VTIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
V + I S D C++++I++CY+SV DDA+A+K G
Sbjct: 216 VKLLGLHIFAPSAPVKAPSSDAVDLDVCKNVLIKNCYMSVNDDAVALKGG 265
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 62/263 (23%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
N +A RA+ A++ + KGGG + VP G W T L SH+ L + + A + + +
Sbjct: 60 NQKAINRAI-AVASM--KGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEPDLY 116
Query: 152 PLM----PPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG--QAWWK---- 201
PL+ L Y Y I+ D+ ++G GTI+G G WW
Sbjct: 117 PLVRTAWEGLECYNYS---------PCIYAYGATDIAVSGK-GTIDGGGSNDTWWAWNGN 166
Query: 202 ---KYRQKLLNNT------------------------------RGPLVQIMWSSDILISN 228
Y++ + + R L+ M ILI +
Sbjct: 167 PRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGCGLRPQLINFMHCERILIRD 226
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAI 282
+ + +SPFW +HP KN+T+ N +I ++CE+++I++C GDD IAI
Sbjct: 227 VKMVNSPFWVIHPLLSKNITVDNVYIWNEGPNGDGCDPEACENVLIQNCTFHTGDDCIAI 286
Query: 283 KSGWDQYGIAYGRPSMNILIRNL 305
KSG + G +G+PS NI+IRN
Sbjct: 287 KSGRNNDGRLWGKPSKNIIIRNC 309
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TDFG V G NT+A A+ A +K GGG++ VP G WLT P + S++ L L
Sbjct: 54 FKITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCL 110
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
++A + +N + + +P + + G E + + ++ ++V I+G GT+
Sbjct: 111 EENAVLSFTDNPEDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAISG-KGTLQPKM 165
Query: 194 GQGQAWWKK---YRQKLL---------------------NNTRGPLVQIMWSSDILISNI 229
G + W+K+ + Q L N+ R L+ ++++
Sbjct: 166 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGENHLRPHLIHFNRCKNVMLDGF 225
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 226 KIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 285
Query: 284 SGWDQYGIAYGRPSMNILIRNL 305
+G +Q P NI+IRN
Sbjct: 286 AGRNQDAWRLNTPCENIVIRNC 307
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 34/255 (13%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
+ DFG GDG T++T A Q+A+ A +K G + PG +L+ + S +TL L
Sbjct: 28 KVNDFGAKGDGSTMDTAAIQKAIDAAAK----SHGTVVFAPGTYLSGSIFVKSGVTLQLD 83
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
IL + + +P+MP + G E P + ++ KD VITG GTI+G G+
Sbjct: 84 KGVTILGSQRIEDYPVMPTRVA---GIEMSWP--AALVNVYEQKDAVITGE-GTIDGDGK 137
Query: 198 AWW-------KKYRQKLLN-----NTRGP-LVQIMWSSDILISN-ITLRDSPFWTLHPYD 243
+W K Y + L + R P LVQ+ SS I I + LR S FWTLH
Sbjct: 138 IYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTLHICY 197
Query: 244 CKNVTIRNAFISKIQ----------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
+VT I + DS + +V+ I+V DDA+ +K+G D G+
Sbjct: 198 STDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSDGLRV 257
Query: 294 GRPSMNILIRNLVVR 308
RP+ ++++R+ +R
Sbjct: 258 NRPTEDVVLRDSTIR 272
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + + + +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DF V D +L+T+A QRA+ + S G + +P GR+LT L S MTL
Sbjct: 2 ARINIIDFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTL 56
Query: 135 FLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LA DA +L + E Y P +P+ G + P + ++ + ++V + G +GT++
Sbjct: 57 ELAKDAVLLGSQRLEDY----PDIPTRVAGIDMVWP--AAMLNINHCRNVTVCG-SGTLD 109
Query: 194 GQGQAWWKK-------------YRQKLLN-----NTRGPLVQIMWSSD-ILISNITLRDS 234
GQG WW K Y ++ L + R P +++ S+ + + + T +DS
Sbjct: 110 GQGAVWWHKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDS 169
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW LH K V ++ + DS + + +E C +S DD I +KSG
Sbjct: 170 GFWNLHVCYSKQVNLQRLRVMNATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 288 QYGIAYGRPSMNILIRNLVV 307
GR + +I+IR+ +
Sbjct: 230 AEAQQLGRTARDIIIRDCTL 249
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
N+ DFG G G +T + Q A+ + G++ +P G +LTAP L S++TL
Sbjct: 82 VTLNVKDFGATGTGEKHDTASLQAAIMSCPP-----SGRVLIPEGTYLTAPLYLKSNITL 136
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHH-------GPR--FGSFIHGQNLKDVVI 185
+ A++L + +P++P G++ P F S + G + +V I
Sbjct: 137 EIQKGAKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLTGIGVNNVKI 196
Query: 186 TGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
G G I+G WWK ++K + R L+ I DILI +T+++SP WT+HP
Sbjct: 197 IGK-GIIDGNASFDNWWKDAKKKRVA-WRPRLIFIKNCRDILIEEVTVQNSPSWTIHPMF 254
Query: 244 CKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
+N+ + N + + +SC+++ I SVGDD IAIKSG G
Sbjct: 255 SQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKI 314
Query: 296 PSMNILIRNL 305
S +I+IRN
Sbjct: 315 ASQDIMIRNC 324
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNANGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + + + +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 62/287 (21%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + +L DFGG GDGVT+NTEAF + A+S+L KKGGG L+VP G +LT +
Sbjct: 41 LPTIPDNRVSLPDFGGKGDGVTMNTEAFGK---AMSELSKKGGGHLDVPAGVYLTGMISF 97
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
++ L L +A I+ ++ + + G + P I+ K++ ITG
Sbjct: 98 KDNIDLHLDKNAIIVLSPDKNDFIKI----ENGMKDDKATPG----INASKRKNISITGE 149
Query: 189 NGTINGQGQAWWKKYRQKLLNNT------------------------------------- 211
G I+G G+ WW+ ++ +++T
Sbjct: 150 -GIIDGNGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQ 207
Query: 212 ---RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLF 260
R LV+ ++L+ +TL +SP + + P C NV I NA
Sbjct: 208 ERYRPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDI 267
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
SC ++I + I GDD I +K+G G+ YG P N+LI N V
Sbjct: 268 SSCRQVLIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTV 313
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNAHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + + + +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|329961304|ref|ZP_08299450.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328531910|gb|EGF58730.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 490
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 34/265 (12%)
Query: 57 FSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
F L VA L+ ++T G GDGVT NT Q+AV S+ KGGG + V
Sbjct: 8 FKTLLLAVALLFSASLQAETIDITKRGAKGDGVTDNTVVIQKAVDECSR---KGGGTVLV 64
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
P G +L P L S++ L L A +LA + P ++ + + ++
Sbjct: 65 PSGVYLIRPVELKSNVNLHLDFGALLLASTRLSDYDNAFPF------KDGSMNQSSALLY 118
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSP 235
+ K++ +TG GTI+GQG + ++ + P ++ ++ I+++++TLR+S
Sbjct: 119 ARGQKNISLTGF-GTIDGQGGSKTFQFGNDADGGPKRPKIIYLVECKGIVVADLTLRNSA 177
Query: 236 FWTLHPYDCKNVTIRNAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKS 284
+W H C++VTIR +++F C ++ VI DCYI V DDAI KS
Sbjct: 178 YWVQHYEKCEDVTIRG-----LKVFSHCNYNNDGLDIDAKNAVISDCYIDVEDDAICFKS 232
Query: 285 GWDQYGIAYGRPSMNILIRNLVVRS 309
+ NI + N V S
Sbjct: 233 DHPEL-------CENITVTNCVTAS 250
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G NT+A A+ A K GGG++ VP G WLT P + S++ L+L
Sbjct: 52 FLITDYGAKNGGKVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 109 EENAILNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITG-KGTLQPKM 163
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 164 DTWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCQI 307
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 70/299 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + ++ DFGG GDG TLNT AF A+ A++ +GGG++ VP G W T P L
Sbjct: 40 PAIPSNTVSVADFGGSGDGHTLNTAAFADAIAALAA---RGGGRVVVPEGVWYTGPIELK 96
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+ L L +A I+ +++ +PL+ + R S I + +K+V ITG
Sbjct: 97 DNTELHLEQNAVIVFSDDKTLYPLVETT-----FEGLNTLRCQSPISARGVKNVAITGR- 150
Query: 190 GTINGQGQAW-------------------------------------------------- 199
G I+G G AW
Sbjct: 151 GVIDGNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQNVST 210
Query: 200 WKKYR---QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
W K R +++ + R ++ + ++L+ + ++SP W +HP C N+ + + +
Sbjct: 211 WAKTRADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRC 270
Query: 257 IQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+SC ++V+ + VGDD I IKSG D+ G G P NIL+ N +V
Sbjct: 271 PDYAQNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIV 329
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G NT+A A+ A K GGG++ VP G WLT P + S++ L+L
Sbjct: 52 FLITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 109 EENAILNFTDNP--FDYLPAVMTSWEGLECYN--YSPLLYAFECENVAITG-KGTLQPKM 163
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 164 DTWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCQI 307
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNAHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + + + +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 75/302 (24%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R A +++ D+G V G NTEA A+ S+ +GGG + VP G WLT P +
Sbjct: 16 PVFREAQYDIRDYGAVAGGRVSNTEAINAAIRTCSE---EGGGHVIVPSGLWLTGPVRIL 72
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF--IHGQNLKDVVITG 187
+ + L + + A ++ +N + +PL+ + Y PR + I + ++V ITG
Sbjct: 73 TGVDLHVENGAVLMFDKNREEYPLI--ISDY-----EGQPRIRTVSPIMAADAQNVAITG 125
Query: 188 HNGTINGQGQAW------------WKKY-------------------------------- 203
GTI+G G+ W W K+
Sbjct: 126 E-GTIDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEP 184
Query: 204 ----------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAF 253
++ + R +V + +LI +TL++SP W +HP C N+T+ NAF
Sbjct: 185 SLDDPDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAF 244
Query: 254 ISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
I +SC+ + I + VGDD I +KSG ++ G P+ + I +
Sbjct: 245 IKNPYYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDC 304
Query: 306 VV 307
V
Sbjct: 305 TV 306
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 60/259 (23%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY 160
I +L GGG L P G +LT ++ S++TL L A + EN + + P +
Sbjct: 49 TIDRLNAHGGGTLFFPAGTYLTGSIHMKSNITLELEAGATLKFSENFDDFLPYVEV---- 104
Query: 161 GYGREHHGPRFGSF---IHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT------ 211
H G SF I+ + +++ I G GT++GQG+AWW ++ + L++
Sbjct: 105 ----RHEGIMMKSFQPLIYAVDAENITIKGE-GTLDGQGKAWWTEFFRVLVDLRDNGKRN 159
Query: 212 ----------------------------------RGPLVQIMWSSDILISNITLRDSPFW 237
R P + + ++ + + + +SPFW
Sbjct: 160 INKYQPMFEKENDLKALYAETNEDWHGTLDRRFFRPPFIHPIRCKNVRVEGVKIINSPFW 219
Query: 238 TLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
T++P C NVTI+ I + +SC+++ I DC+ISVGDD I IKSG D
Sbjct: 220 TVNPEFCDNVTIKGITIHNVPSPNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQA 279
Query: 291 IAYGRPSMNILIRNLVVRS 309
G P NI I N + S
Sbjct: 280 RKLGVPCENITITNCTMLS 298
>gi|333382713|ref|ZP_08474380.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828446|gb|EGK01153.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
Length = 469
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 125/239 (52%), Gaps = 30/239 (12%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNL 128
P+ + +N+ D+G GDG T + A Q A+ A S + GGG + +P G ++ +PF L
Sbjct: 22 PKTGESTYNIIDYGAKGDGKTDDATAIQAAINACS---QSGGGTVLIPAGHTFMCSPFEL 78
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L ++ +LA +E + + G G +IHG++LK+V ITG
Sbjct: 79 ASYVELRLESNSRLLANPDETVYTQSAFRDNRGEGM--------MWIHGKDLKEVSITG- 129
Query: 189 NGTINGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
GTI+G G A+ K Y K + + R ++ ++ +I +IT+R+S +WT+H
Sbjct: 130 TGTIDGNGIAFMGKELEDSYELKPVTDFDPRPHVLTLINVEKTVIRDITIRNSAYWTVHL 189
Query: 242 YDCKNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
C + +I ++ +++ D +++ I +C+I GDD I +K+ +++YG
Sbjct: 190 IGCNDASIDGITILNDLKIRNGDGIDIDHSKNVRIANCHIESGDDCICLKNRREFEEYG 248
>gi|212693803|ref|ZP_03301931.1| hypothetical protein BACDOR_03324 [Bacteroides dorei DSM 17855]
gi|237709331|ref|ZP_04539812.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755006|ref|ZP_06089920.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513257|ref|ZP_08792779.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423232694|ref|ZP_17219094.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|423242177|ref|ZP_17223287.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
gi|423247386|ref|ZP_17228436.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|212663692|gb|EEB24266.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229437124|gb|EEO47201.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229456716|gb|EEO62437.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234617|gb|EEZ20196.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392623133|gb|EIY17238.1| hypothetical protein HMPREF1063_04914 [Bacteroides dorei
CL02T00C15]
gi|392632526|gb|EIY26485.1| hypothetical protein HMPREF1064_04642 [Bacteroides dorei
CL02T12C06]
gi|392639921|gb|EIY33729.1| hypothetical protein HMPREF1065_03910 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD+G + D L TE Q A+ A ++ GGG + +P G +L+ L L +
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ---NGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + ++ + ++G GTI+G G
Sbjct: 106 GAVLKGSDDISNFPIIDTRME-GQSLKY----FAALVNADKVDGFTLSGK-GTIDGNGLR 159
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+K+ ++ R LV I S+++ +S + L +SPFWT H Y C ++ I
Sbjct: 160 YWKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKIL 219
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 220 NLYIFSPERPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGG 265
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 43/265 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G NT+A A+ A K GGG++ VP G WLT P + S++ L+L
Sbjct: 52 FLITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 109 EENAILNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAITG-KGTLQPKM 163
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 164 DTWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R+SPFWT+H Y C +RN + I F+ + ++EDC GDDA+ I
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKAHGDNNDGID-FEMSRNFLVEDCSFDQGDDAVVI 282
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVV 307
K+G +Q P NI+IRN +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQI 307
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 71/300 (23%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P N+T +G VG+G+ NT AF +A I ++ + GGG++ VP G WLT P L
Sbjct: 47 LPSFPDHEVNITAYGAVGNGIEKNTAAFAKA---IDEVAQAGGGRVIVPRGIWLTGPVTL 103
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L + A +L + +PL+ S+ + R S I+ +++ ITG
Sbjct: 104 QSNINLHLEEGALVLFSRDFDDYPLVK--TSF---EGLNTVRCTSPINAFEAENIAITGK 158
Query: 189 NGTINGQGQAWWKKYRQKLL-------------------------NNTRG---------- 213
G I+G G AW + K+ N+ +G
Sbjct: 159 -GVIDGNGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVP 217
Query: 214 -----------------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
+V ++ + +L+ T ++SP W +HP +NV IRN +
Sbjct: 218 DLISDDELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRN 277
Query: 257 ---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ L +SC++ ++ + VGDDAI KSG +Q G G P+ N++++N V
Sbjct: 278 PWYSQNGDGLDL-ESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTV 336
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 57/283 (20%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + +TD+ D +L T+A RA+ A S +GGG + VP G +LTAP L
Sbjct: 11 PTFPDKTYVITDYYNGKD--SLYTDAINRAIEACSS---QGGGTVLVPDGEFLTAPIRLK 65
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L+D + IL + + L + + G + H + +G+N ++ ITG
Sbjct: 66 SNVNLHLSD-STILKFTTD--YNLFETVLTRIEGIDCHNISPLIYAYGEN--NIAITGK- 119
Query: 190 GTINGQGQA--WWKKYR-------------QKLL-------------------NNTRGPL 215
G ++GQ W+ + R +K L N R
Sbjct: 120 GKLDGQASTDNWFAEQRIRGIKAENGETVNEKTLLYQMKADSIPVKERVFEKANGIRPQF 179
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDM 266
+ + +IL+ T+ SPFW +HP +NVTI+ K+Q +SCE++
Sbjct: 180 INLYKCKNILLEGFTINRSPFWLIHPLLSENVTIKGV---KMQSHGPNNDGCDPESCENV 236
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IEDC GDD IAIKSG D+ G + P NI++R ++
Sbjct: 237 LIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECRMKD 279
>gi|408369676|ref|ZP_11167456.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
gi|407744730|gb|EKF56297.1| glycoside hydrolase family protein [Galbibacter sp. ck-I2-15]
Length = 441
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 31 KTLFTVLWLAAFASVFIWQRNAVVGGFSFLRW--GVASRPIPRLRPAAFNLTDFGGVGDG 88
K LF V + +F + + ++ G W P+ L + +TD G V D
Sbjct: 7 KHLFIVFFFLSFGQLSTFAQDLFPDGTPIPDWFRETTQTPLSEL-GKVYKITDHGVVSDS 65
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENE 148
+ T+A Q I KGGG + +P G +LT L+L A + ++
Sbjct: 66 TQVQTKALQAV---IDLTASKGGGVVVIPKGVFLTGSLFFRQSTHLYLEKGAVLKGSDDI 122
Query: 149 KYWPLMPPL---PSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY-- 203
+P++ S Y F + I+ + +TG GTING G +WK +
Sbjct: 123 SNFPVVMTRIEGESVKY--------FPAIINVDGVDGFTLTGE-GTINGNGLRYWKAFWL 173
Query: 204 -RQ-----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
RQ + R L+ + S +I IS + L+DSPFWT H Y C+NV + N I+
Sbjct: 174 RRQWNPDCTNKDEMRPRLLYVSNSKNIQISGVHLKDSPFWTTHFYKCENVKLLNLKITSP 233
Query: 258 QL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
D C + +I++CY+SV DDA+A+K G
Sbjct: 234 SEPVKAPSTDAVDIDVCTNFLIKNCYMSVNDDAVALKGG 272
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 126/274 (45%), Gaps = 47/274 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P +F++T FG G G T A Q+A I + K GGG++ VP G +L+ L
Sbjct: 16 VPVFPDRSFDVTAFGADGSGKKDATGAIQKA---IDQAHKAGGGRVAVPEGVFLSGALRL 72
Query: 129 TSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S++ L LA A I +N E Y P++ L + G E + + I+ +++ ITG
Sbjct: 73 KSNVELHLAQGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEAENIAITG 127
Query: 188 HNGTINGQG--QAWW------------KKYRQKLLNNT-----------------RGPLV 216
GT++GQG + WW +K R L R +
Sbjct: 128 -KGTLDGQGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGHYLRPNFI 186
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIED 270
Q DILI + + +SP W +HP C+NVT+ + + +SC+++VI+
Sbjct: 187 QPYRCKDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKNVVIKG 246
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
C+ GDD IA+KSG + PS NI+I +
Sbjct: 247 CHFDSGDDCIAVKSGRNADARRINMPSENIVIEH 280
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 47/279 (16%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
V +P +F++T FG +G +TEA Q+A I + + GGG++ VP G +L+
Sbjct: 11 VKKLKVPVFPNRSFDVTSFGADENGKNDSTEAIQKA---IDQAHQAGGGRVTVPEGVFLS 67
Query: 124 APFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
L S++ L +A A I +N E Y P++ L + G E + + I+ +
Sbjct: 68 GALRLKSNVDLHIAKGAVIKFSQNPEDYLPVV--LTRF-EGVELY--NYSPLIYAYEADN 122
Query: 183 VVITGHNGTINGQG--QAWW------------KKYRQKLLNNT----------------- 211
+ ITG GT++GQG + WW +K R L
Sbjct: 123 IAITG-KGTLDGQGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGHYL 181
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCED 265
R +Q ILI +T+ +SP W +HP C+NVT+ + + +SC++
Sbjct: 182 RPNFIQPYRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHGPNTDGVNPESCKN 241
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
+VI+ C+ GDD IA+KSG + G PS NI+I +
Sbjct: 242 VVIKGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEH 280
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T QRA + ++ GGG+L +P GR+ + NL S L L
Sbjct: 4 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 60
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + L + H ++ ++++I+G G I+G+G
Sbjct: 61 EAGAVLIASPRLADYQAVQAL---SCAEKSH----NVLLYALGQRNIIISG-TGRIDGEG 112
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
+AW+ R +L R ++ + ++ T+ +P WT+H C++V
Sbjct: 113 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 172
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + DSCE + + + Y+S DDAI IK+ A RP+ I+I N
Sbjct: 173 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 230
Query: 305 LVVRS 309
++RS
Sbjct: 231 CLLRS 235
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 39/260 (15%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DF V D +L+T+A QRA+ + S G + +P GR+LT L S MTL
Sbjct: 2 ARINIIDFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTL 56
Query: 135 FLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LA DA +L + E Y P +P+ G + P + ++ + ++V + G +GT +
Sbjct: 57 ELAKDAMLLGSQRLEDY----PDIPTRVAGIDMVWP--AAMLNINHCRNVTVCG-SGTFD 109
Query: 194 GQGQAWWKK-------------YRQKLLN-----NTRGPLVQIMWSSD-ILISNITLRDS 234
GQG WW K Y ++ L + R P +++ S+ + + + T +DS
Sbjct: 110 GQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDS 169
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW LH K V ++ + D+ + + +E C +S DD I +KSG
Sbjct: 170 GFWNLHVCYSKQVNLQRLRVMNATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRG 229
Query: 288 QYGIAYGRPSMNILIRNLVV 307
GR + +I+IR+ +
Sbjct: 230 AEAQQLGRTARDIIIRDCTL 249
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 51/271 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++TDFG V T+A +A+ A S GGG++ +P G W + +L S++ L L
Sbjct: 60 FSITDFGAVEKEKISTTKAISQAIAAASD---AGGGRVIIPAGEWFSGKIHLKSNVNLHL 116
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++ A IL + +P + + G E + + I+ ++V ITG G + +
Sbjct: 117 SEGA-ILTFSGDP-QDYLPAVHTTWEGIECYN--YSPLIYAYKCENVAITGA-GQLKAEM 171
Query: 197 QAWWKKY------------------------RQKLLNNT---RGPLVQIMWSSDILISNI 229
W + + + ++N+T R +Q ++ + +
Sbjct: 172 GVWKRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQFIQFNRCKNVRMEGV 231
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIEDCYISVGDD 278
T+ +SPFW +HPY C NV IRN ++++ + CE+++IEDC GDD
Sbjct: 232 TIINSPFWVIHPYMCHNVVIRN-----VKVYAHGHNNDGVDPEMCENVLIEDCVFDQGDD 286
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
AIAIKSG +Q PS NI++RN +V++
Sbjct: 287 AIAIKSGRNQDAWRLNTPSRNIVVRNCLVKN 317
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 55/286 (19%)
Query: 70 PRLRPAAFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
P++ + +T FG N +A RA I+ L K+GGG++ VP G+W T L
Sbjct: 37 PKIANRSVVITKFGAKTSASAAQNQKAILRA---IAVLAKQGGGKVIVPAGKWNTGALRL 93
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L ++ DA + + + +PL+ G ++ P I+ DVV++G
Sbjct: 94 QSGIELVVSKDAHLQFVFDRDLYPLVK-TSWEGMMCWNYSP----CIYSYEANDVVVSGE 148
Query: 189 NGTINGQG--QAWW-----------------------KKYRQKLLN-------------- 209
GTI+G G + WW + QK+
Sbjct: 149 -GTIDGGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGY 207
Query: 210 NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSC 263
R L+ + + I IS +TL SPFW +HP CKNVT+ I + C
Sbjct: 208 GLRPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWNEGPNGDGCDPEGC 267
Query: 264 EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
E+++I++ GDD IAIKSG + G + +PS NI+IRN V+
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMED 313
>gi|167761858|ref|ZP_02433985.1| hypothetical protein BACSTE_00201 [Bacteroides stercoris ATCC
43183]
gi|167700228|gb|EDS16807.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 432
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G D L TE Q I + + GGG + +P G +L+ L++
Sbjct: 47 YTITDYGVANDSTILQTEKIQAV---IDRAAENGGGVIIIPKGTFLSGSIFFKPKTHLYM 103
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ + ++ G ++ F + ++ + I+G GTING G
Sbjct: 104 EEGAVLKGSDDISNFAIVNTRIE-GQSLKY----FAALVNADKVNGFTISGK-GTINGNG 157
Query: 197 QAWWKKY---RQKL-----LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + RQ + ++ R LV I S+D+ IS + L +SPFWT H Y C N+
Sbjct: 158 HRYWKSFWLRRQVIPKCTNMDELRPRLVYISNSNDVQISGVRLMNSPFWTTHIYRCSNIK 217
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I S D C ++++++CY+SV DDA+A+K G
Sbjct: 218 LLNLHIFAPAAPVKAPSSDAIDIDVCSNVLVKNCYMSVNDDAVALKGG 265
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 37/255 (14%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ DFG G ++T A QRA I+K G L +P GR+LT L S MTL L
Sbjct: 5 NVCDFGADPSGRQVSTAAIQRA---IAKTGHND--TLVIPAGRFLTGSLFLKSGMTLHLE 59
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A++L ++ +PL+ + G + P + I+ N DV ITG GTI+GQG
Sbjct: 60 AGAQLLGSQSLDDYPLIDTRVA---GIDMRWP--AAIINIINCHDVSITG-GGTIDGQGL 113
Query: 198 AWWKKY-----RQKLLNN--TRG-----------PLVQIMWSSD-ILISNITLRDSPFWT 238
WW+++ + +L + RG P +++ S+ I + + T R+S FW
Sbjct: 114 VWWQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWN 173
Query: 239 LHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
+H +++T+ + IS DSCE + +E C +S DD I IK+G Q
Sbjct: 174 VHLCYSRHITLDSVQISNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEAA 233
Query: 292 AYGRPSMNILIRNLV 306
+ R + +I+IR+
Sbjct: 234 SKARSARDIVIRDCT 248
>gi|345519936|ref|ZP_08799343.1| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|345457031|gb|EET16505.2| exopolygalacturonase [Bacteroides sp. 4_3_47FAA]
Length = 389
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD+G + D L TE Q A+ A ++ GGG + +P G +L+ L L +
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ---NGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + ++ + ++G GTI+G G
Sbjct: 106 GAVLKGSDDISNFPIIDTRME-GQSLKY----FAALVNADKVDGFTLSG-KGTIDGNGLR 159
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+K+ ++ R LV I S+++ +S + L +SPFWT H Y C ++ +
Sbjct: 160 YWKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLL 219
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 220 NLYIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGG 265
>gi|294776867|ref|ZP_06742330.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449343|gb|EFG17880.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 434
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD+G + D L TE Q A+ A ++ GGG + +P G +L+ L L +
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ---NGGGVIVIPKGTYLSGALFFKPQTHLHLEE 105
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + ++ + ++G GTI+G G
Sbjct: 106 GAVLKGSDDISNFPIIDTRME-GQSLKY----FAALVNADKVDGFTLSGK-GTIDGNGLR 159
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+K+ ++ R LV I S+++ +S + L +SPFWT H Y C ++ +
Sbjct: 160 YWKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLL 219
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 220 NLYIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGG 265
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPP---GRWLTAPFNLT 129
R +++D+G D +++T A Q A+ A S+ + GG + + P G +LT L
Sbjct: 517 RACICDVSDYGARDDNKSISTHAIQTAIEACSRCPE--GGHVLLRPLDKGIYLTGSLFLK 574
Query: 130 SHMTLFLADDAEILAIENEK--YWPLM------------PPLPSYGYGREHHGPRFGSFI 175
S++ + +L N+ +WP + L + G H
Sbjct: 575 SNIIFEVTAGVRLLGTANKSTVHWPQIYRRNAGVLELSRAALLNAGTCLTFHSTNQTGDQ 634
Query: 176 HGQ--NLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---RGPLVQIMWSSDILISNIT 230
+ ++ ITG GTI+G G + W Y LN + R L+ MW + +S++T
Sbjct: 635 CAEWSRYSNITITG-AGTIDGNGFSGW--YLPPYLNGSFTNRPMLIAPMWVDGLYLSDLT 691
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
L D FWT+ P CKNV I + I + DSC+++++E CYIS GDD IAIKS
Sbjct: 692 LTDPAFWTVAPAFCKNVHIHDLRIITSGPNTDGVDPDSCQNVLVERCYISTGDDCIAIKS 751
Query: 285 GWDQYGIAYGRPSMNILIRNLVVR 308
G +A P+ N+ IR++ R
Sbjct: 752 GRGPQALAINMPTANVTIRHVPQR 775
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 127/264 (48%), Gaps = 41/264 (15%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+T FG V NT A RA+ +KLG GG + +P G WLT +L S++ L L
Sbjct: 65 ITGFGAVPGDQQKNTAAIARAIATANKLG---GGIVVIPKGEWLTGKIHLKSNVNLHLEK 121
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A +L N + + +P + S G E + + I+ K+V ITG GT+ Q
Sbjct: 122 GATLLFSGNPQDY--LPAVVSSWEGMECYN--YSPLIYVYECKNVAITGE-GTLKAQMAT 176
Query: 199 WWKKY------------------------RQKLLNNT---RGPLVQIMWSSDILISNITL 231
W K + +++++N+T R +Q S +IL+ +++
Sbjct: 177 WEKWFARPRAHMESIKRLYNLAWNRAPLEQRQMVNDTAHLRPQFIQFNRSENILLEGVSV 236
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMVIEDCYISVGDDAIAIKSG 285
+SPFWT+H Y KN+ +RN + + ++++IE+C GDDAIAIKSG
Sbjct: 237 VNSPFWTIHLYLSKNIRLRNLNVYAHGHNNDGVDPEMSQNVLIENCVFDQGDDAIAIKSG 296
Query: 286 WDQYGIAYGRPSMNILIRNLVVRS 309
+ G PS NI+IRN V++
Sbjct: 297 RNPEGWRLKTPSKNIVIRNCTVKN 320
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T QRA + ++ GGG+L +P GR+ + NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + + L + H ++ +++ I+G G I+G G
Sbjct: 60 EAGAVLIASQRLADYQAVQAL---SCAEKSH----NVLLYALGQRNITISG-TGRIDGDG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
+AW+ R +L R ++ + ++ T+ +P WT+H C++V
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + DSCE + + + Y+S DDAI IK+ A RP+ I+I N
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 41/268 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFNL 128
P +++T++G D + A +A I++ GGG + +P G + + L
Sbjct: 44 PAFADTIYDVTEYGAKDDTAFDSRPAILKA---INQCNTDGGGTVLIPAGNYFIKGAITL 100
Query: 129 TSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITG 187
S++ L +A+ A + + E Y P++ L + G E + FI+ +V +TG
Sbjct: 101 KSNINLHIAEGARLEFSTEAADYLPMV--LTKW-EGTECF--NYSPFIYAYQCTNVAVTG 155
Query: 188 HNGTINGQGQAWWK-----------KYRQKLLNNT-------------RGPLVQIMWSSD 223
GTI+G G + + RQ +++ R ++Q +
Sbjct: 156 K-GTIDGNGSVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKN 214
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCE-----DMVIEDCYISVGD 277
+L+ ++ + DSPFW +HP C NVT+RN +I S D C+ +++IE +VGD
Sbjct: 215 VLVEDLKIYDSPFWIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLIEGMDFNVGD 274
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNL 305
D IAIKSG DQ G G+ + N++IRN
Sbjct: 275 DGIAIKSGRDQDGWRIGQATENVIIRNC 302
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF DG T +T QRA + ++ GGG+L +P GR+ + NL S + L L
Sbjct: 3 LSLADFHPAADGETPDTAVLQRA---LDQIAAAGGGRLTLPAGRYRSGCLNLPSDIELHL 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + + L + H ++ +++ ++G G I+G+G
Sbjct: 60 DAGAVLIASQQLADYQTVQAL---SCAEKSH----NVLLYALGQRNITLSG-TGRIDGEG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
AW+ R +L + R L+ + ++ TL +P WT+H C++V
Sbjct: 112 DAWFAAERDAQGYRLPHADRPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHL 171
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + DSCE + + + Y S DDAI IK+ A RP+ I+I N
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 59/295 (20%)
Query: 65 ASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
+S +P FN+ DFG GD T NT A A I +GGGQ+ +P G+++T
Sbjct: 51 SSIKVPSFPDKTFNIIDFGANGDNKTNNTVAINNA---IKSCNAQGGGQVIIPQGQFITG 107
Query: 125 PFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+L S++ L L + A + + E Y +P + + G E G + I+ +++
Sbjct: 108 AIHLLSNVNLHLEEGAILSFSTSPEDY---LPAVFTRWEGLEMMG--YSPLIYAFEQENI 162
Query: 184 VITGHNGTINGQGQ--AWW------------------------KKYRQKLLNNT------ 211
ITG G + G WW K R KL+ +
Sbjct: 163 AITGK-GILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPV 221
Query: 212 -----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF 260
R P +Q +++LI IT+++SPFW ++P C +VT+ + S
Sbjct: 222 EQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSSHGPN 281
Query: 261 ------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC + I++C GDD IAIKSG + G S NI+I N ++
Sbjct: 282 SDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKE 336
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T QRA + ++ GGG+L +P GR+ + NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + + L + H ++ +++ I+G G I+G G
Sbjct: 60 EAGAVLIASQRLADYQAVQAL---SCAEKSH----NVLLYALGQRNITISG-TGRIDGDG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
+AW+ R +L R ++ + ++ T+ +P WT+H C++V
Sbjct: 112 EAWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + DSCE + + + Y+S DDAI IK+ A RP+ I+I N
Sbjct: 172 TIDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +T +G G LNT+A +A+ A +G GG++ +P G WLT P +L S++ L++
Sbjct: 52 FLITKYGAKAGGKKLNTKAIAKAITACHLVG---GGRVVIPKGEWLTGPIHLKSNINLYM 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + + + +P + + G E + + I+ + +++ ITG G + +
Sbjct: 109 EEGAVLRFTDTPSDY--LPAVMTSWEGMECYN--YSPLIYASDCENIAITG-KGVLAPKM 163
Query: 197 QAW--W------------KKY-----------RQKLL--NNTRGPLVQIMWSSDILISNI 229
W W K Y RQ + NN R L+ + ++L+
Sbjct: 164 DTWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIR------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y CK +R N + + + +IE+C GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCKGGIVRGLDVKANGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
SG ++ G P NI++RN V
Sbjct: 284 SGRNRDAWRLGTPCENIVVRNCQV 307
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +T +G G LNT+A +A+ A +G GG++ +P G WLT P +L S++ L++
Sbjct: 52 FLITKYGAKAGGKKLNTKAIAKAITACHLVG---GGRVVIPKGEWLTGPIHLKSNINLYM 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + + + +P + + G E + + I+ + +++ ITG G + +
Sbjct: 109 EEGAVLRFTDTPSDY--LPAVMTSWEGMECYN--YSPLIYASDCENIAITG-KGVLAPKM 163
Query: 197 QAW--W------------KKY-----------RQKLL--NNTRGPLVQIMWSSDILISNI 229
W W K Y RQ + NN R L+ + ++L+
Sbjct: 164 DTWRIWFARPQAHMEALRKLYTMASTDVPVEERQMAVGENNLRPHLIHLNRCRNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIR------NAFISKIQLFDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y CK +R N + + + +IE+C GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCKGGIVRGLDVKANGHNNDGIDLEMSRNFLIENCKFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
SG ++ G P NI++RN V
Sbjct: 284 SGRNRDAWRLGTPCENIVVRNCQV 307
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 88/332 (26%)
Query: 48 WQRNAVVGGFSFLRWGVASRPIPRLRPAAFN-----LTDFGGVGDGVTLNTEAFQRAVYA 102
W + A V G G++++ +P ++P +F +T +G V DG LNT+A A+ A
Sbjct: 4 WFKAAAVLGLMACSSGLSAQKLPVIQPTSFKKDSTWITKYGAVADGQMLNTQAINAAIDA 63
Query: 103 ISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIEN-------EKYWPLMP 155
+K KGGG + VP G W T P L S++ L L A + ++ E W +P
Sbjct: 64 CNK---KGGGVVVVPAGLWATGPITLKSNVNLHLKKGAVLQFTKDFNQYQLVEGNWEGIP 120
Query: 156 PLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---- 211
+ R S + N ++ ITG G I+G G+AW + ++KL +
Sbjct: 121 QM------------RNQSPVSATNATNIAITGF-GVIDGGGEAWRQVRKEKLTESQWKEW 167
Query: 212 ------------------------------------------------RGPLVQIMWSSD 223
R L+ +
Sbjct: 168 VAGGGVVSEDGKSWYPSEQWLKAAKMKNPGEFTPDKTPEFYKSIKDFLRPNLIVLTKCKK 227
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISV 275
+L+ +T ++S W LHP +++T+RN + +SC ++IE+ V
Sbjct: 228 VLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVESCNRVLIENSSFDV 287
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
GDD + +KSG D+ G G P+ N++IR+ V
Sbjct: 288 GDDGLCMKSGRDEAGRKRGMPTENVIIRDCKV 319
>gi|319644255|ref|ZP_07998768.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|423312681|ref|ZP_17290618.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
gi|317384246|gb|EFV65218.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392687415|gb|EIY80708.1| hypothetical protein HMPREF1058_01230 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD+G + D L TE Q A+ A ++ GGG + +P G +L+ L L +
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ---NGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + ++ + ++G GTI+G G
Sbjct: 106 GAVLKGSDDISNFPIIDTRME-GQSLKY----FAALVNADKVDGFTLSGK-GTIDGNGLR 159
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+K+ ++ R LV I S+++ +S + L +SPFWT H Y C ++ +
Sbjct: 160 YWKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLL 219
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 220 NLYIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGG 265
>gi|146301964|ref|YP_001196555.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156382|gb|ABQ07236.1| Candidate beta glycuronase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 442
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 30/250 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TDFG D + T A Q+ I K GGG + +P G +L+ L++
Sbjct: 53 YTITDFGVSKDSTKIQTTAIQKV---IDKASANGGGVIVIPKGVFLSGALFFKPKTALYV 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++ + +N +P+MP G ++ F + ++ N+ + I+G GTING G
Sbjct: 110 SEGGVLKGSDNIADFPIMPSRME-GQNLDY----FPALVNAYNVDNFSISGK-GTINGNG 163
Query: 197 QAWWKKYRQKLLNN--------TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +W+ + ++ N +R LV + S+++ ++ L +S FWT H Y C NV
Sbjct: 164 KKYWEAFWERRKENPKCTNLEVSRPRLVFVWNSNNVQFQDVKLINSGFWTNHFYKCNNVK 223
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR-- 295
+ + +I + D C + +++ CY+SV DDAIA+K G Y
Sbjct: 224 LLDLYIFSPHIEIKAPSTDAIDIDICNNFLVKGCYMSVNDDAIALKGGKGPYADQDKNNG 283
Query: 296 PSMNILIRNL 305
P+ NI+I +
Sbjct: 284 PNSNIIIEDC 293
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 36/252 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP-PGRWLTAPFNLTSHMTLF 135
+N+ D+G GDG + + A Q+A+ A S + GGG++ +P G +++ L S++ L+
Sbjct: 3 YNVRDYGAAGDGASKDRNAIQKAIDACS---EAGGGRVVLPGGGTYMSGSLVLRSNVELY 59
Query: 136 LADDAEILA-IENEKYWPLMP-----------PLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+ A + A + Y PL P LPSY PR+ FI+G+ +++
Sbjct: 60 VESGAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINCEYDGKPRY-YFIYGRGGENI 118
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDI---LISNITLRDSPFWTLH 240
ITG GTI+G + ++ K + + P + ++ D+ + ++TL FWTLH
Sbjct: 119 RITGF-GTIDGSEEIYYGKQIRYHIEGAYYPRIPMILMEDVEHLTVRDVTLTRCAFWTLH 177
Query: 241 PYDCKNVTIRNAFI-SKIQLF-------DSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
C++V + + I + +++ D C+D+ I +C++ DD I +K+ G+++YG
Sbjct: 178 MAGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNTKGFEKYG 237
Query: 291 IAYGRPSMNILI 302
P NILI
Sbjct: 238 -----PCKNILI 244
>gi|375144674|ref|YP_005007115.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361058720|gb|AEV97711.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 433
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 54 VGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ 113
V G L GVA A +N+ + G GDG TLNT+ Q I +KGGG
Sbjct: 10 VCGCILLTRGVAQ--TGNANTARYNIAEQGAQGDGKTLNTQKIQ---LVIDGCAQKGGGT 64
Query: 114 LNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGS 173
+ +P G +++ L + L L + A + N +P L + G H P +
Sbjct: 65 VVIPKGVFVSGALFLKRGVNLELQEGAVLKGSTNIDDYP---KLNTRIEG--HFEPWRVA 119
Query: 174 FIHGQNLKDVVITGHNGTINGQGQAWWKKY--------RQKLLNNTRGPLVQIMWSSDIL 225
I+G +L+ V ITG +G ++G G+ +WK++ + LN R L I S D+L
Sbjct: 120 LINGDSLEHVRITG-SGILDGSGEPFWKEFYARRDADNKTTNLNVERPRLTFIQHSKDVL 178
Query: 226 ISNITLRDSPFWTLHPYDCKNVTI--------------RNAFISKIQLFDSCEDMVIEDC 271
IS IT +S FW LH Y C++VT+ A S D + + I
Sbjct: 179 ISGITFLNSGFWNLHLYACQDVTVDYCRFHAPSGPKPYHQAPSSDGIDVDCSQRIFIRHS 238
Query: 272 YISVGDDAIAIKSGWDQYGI--AYGRPSMNILIRNLVVRS 309
+ SVGDD IA+K + + RP NI I + + +
Sbjct: 239 FFSVGDDCIALKGSKGPFAMQDQSSRPVENIEISDCIFEA 278
>gi|150004321|ref|YP_001299065.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932745|gb|ABR39443.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD+G + D L TE Q A+ A ++ GGG + +P G +L+ L L +
Sbjct: 49 LTDYGVINDSTLLQTEKIQSAIDAAAQ---NGGGVIVIPKGTYLSGALFFKPKTHLHLEE 105
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + ++ + ++G GTI+G G
Sbjct: 106 GAVLKGSDDISNFPIIDTRME-GQSLKY----FAALVNADKVDGFTLSGK-GTIDGNGLR 159
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+K+ ++ R LV I S+++ +S + L +SPFWT H Y C ++ +
Sbjct: 160 YWKSFWLRRKVNPQCTNMDELRPRLVHISHSNNVQLSGVRLINSPFWTTHLYKCNHIKLL 219
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
N +I + D C ++++++CY+SV DDAIA+K G
Sbjct: 220 NLYIFSPEKPVKAPSTDAIDIDVCSNVLVKNCYMSVNDDAIALKGG 265
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ DFG V G+ NT++ A+ A K GGG++ +P G WLT P +L S++ L+L
Sbjct: 51 FSVVDFGAVKGGIADNTKSIAAAIDACHK---AGGGRVVIPEGEWLTGPVHLKSNVNLYL 107
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+++A + ++ + +P + + G E + + ++ ++V ITG G + +
Sbjct: 108 SENAVLCFTDHPSDY--LPAVMTSWEGMECYN--YSPLVYAIGCENVAITG-KGMLKPKM 162
Query: 197 QAW--W-----------------------KKYRQKLL--NNTRGPLVQIMWSSDILISNI 229
W W + RQ + NN R L+ ++L+
Sbjct: 163 DTWKVWFARPEAHLNALKELYTMASTDVPVEKRQMAVGENNLRPHLIHFNRCRNVLLDGF 222
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R+SPFWT+H Y C RN + I L + + ++EDC GDDA+ I
Sbjct: 223 KIRESPFWTIHIYMCNGGIARNLDVKAHGHNNDGIDL-EMTRNFLVEDCTFDQGDDAVVI 281
Query: 283 KSGWDQYGIAYGRPSMNILIRN 304
K+G ++ P+ NI+IRN
Sbjct: 282 KAGRNRDAWRLNIPTENIVIRN 303
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 124/298 (41%), Gaps = 69/298 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R F++ +G DG+TL+T A +AV + G + VP G WLT P L
Sbjct: 263 PFFRKDTFSIVRYGAKSDGITLSTPAINQAVNLAHEAGGG---VVVVPSGFWLTGPIVLK 319
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L ++ A + + +PL + + G + R + I ++ ITG
Sbjct: 320 SNVNLHISQGALLQFSNKREDFPL---VKTTWEGED--AIRCQAPISAVEASNIAITG-T 373
Query: 190 GTINGQGQAWWKKYRQKL------------------------------------------ 207
G I+G GQ W + + KL
Sbjct: 374 GIIDGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYPSENALKGSKIQKPGSIAA 433
Query: 208 ---LNNT-------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--- 254
LNN R +V + + +L+ IT ++SP WT+HP C+++T+R+ +
Sbjct: 434 GFNLNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNP 493
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ +SC + ++E C GDD I IKSG D G G P+ NI++RN V
Sbjct: 494 WYGQNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTV 551
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TE Q+A I + + GGG++ +P G +LT P L ++ L L + A + + ++
Sbjct: 16 LATEGIQKA---IDEAYQNGGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQED 72
Query: 151 WPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR--QKLL 208
+P++ G R+ + S + + +++ +TG GTI+G G WW +R ++ L
Sbjct: 73 YPVVTSRWE-GVKRK----VYASCLFAEGARNIAVTGF-GTIDGNGMEWWDVFRNRREEL 126
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFD- 261
R L+ I + ++ L +SP WT++P C+++T+ N I D
Sbjct: 127 KYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDP 186
Query: 262 -SCEDMVIEDCYISVGDDAIAIKSGWDQ 288
SC ++ I +C+I VGDD IAIKSG +
Sbjct: 187 ESCRNVRISNCHIDVGDDCIAIKSGTED 214
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ D+G V G NTEA +A+ A +K GGG++ +P G WLT + S++ L L
Sbjct: 54 FSIVDYGAVEGGKQKNTEAIAKAIDACNK---AGGGRVVIPAGEWLTGSIHFKSNVNLHL 110
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN--- 193
A++A + ++ + +P + + G E + + ++ +++ ITG G +
Sbjct: 111 AENAIVRFTDDPADY--LPAVMTSWEGMECYN--YSPLLYAFECENIAITG-KGLLKPHM 165
Query: 194 GQGQAWWKK----------------------YRQ--KLLNNTRGPLVQIMWSSDILISNI 229
G + W+K+ RQ K NN R L+Q ++L+
Sbjct: 166 GLWKVWFKRPPAHMEALKELYTMASTDVPVEQRQMAKGENNLRPHLIQFNRCKNVLLDGF 225
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+ +SPFWT+H Y RN + + + + +IEDC GDDA+ IK
Sbjct: 226 HIEESPFWTIHMYLVDGGIARNLNVKAMGHNNDGIDLEMTRNFLIEDCVFEQGDDAVVIK 285
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
SG +Q P+ NI++RN +V
Sbjct: 286 SGRNQDAWRLNTPTENIVVRNCLV 309
>gi|427386645|ref|ZP_18882842.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
gi|425726135|gb|EKU89001.1| hypothetical protein HMPREF9447_03875 [Bacteroides oleiciplenus YIT
12058]
Length = 455
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 32/253 (12%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+ FN+ +G G+G L++ A Q+A+ A K GGG + VP G +L+A L +
Sbjct: 18 LQAETFNVKKYGARGNGKKLDSPAIQKAIDACHK---AGGGTVLVPAGTYLSATIVLKDN 74
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNG 190
+TL L DA IL + K + + P E G G + + + K+VV+ G G
Sbjct: 75 VTLHLEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALLVAVDAKNVVLEGE-G 127
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-------LVQIMWSSDILISNITLRDSPFWTLHPYD 243
I+GQG A K+ K+ G L++ + DI + +TL+ + WT H +
Sbjct: 128 VIDGQGSA-LKERHIKIDTRPEGQRWGLRPFLLRWVRCEDIRVEGVTLKYAGAWTSHYFQ 186
Query: 244 CKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
C+NV I N I + D C+ + I +C I GDDA+ K+ + G
Sbjct: 187 CRNVNIHNITIRSFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTSSKMGCD---- 242
Query: 297 SMNILIRNLVVRS 309
+I++ N+ ++S
Sbjct: 243 --DIIVTNMKLKS 253
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 50/273 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG D T + + AI GGG + VP G + T P L S++ + +
Sbjct: 50 ITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVVVPKGTFYTGPITLKSNVNFHVEE 107
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-- 196
A + ++ + P + + G + + + +G+ ++ ITG GTI+GQG
Sbjct: 108 GAVLRFSTDQSLY--FPGVITRWEGIDCYNAHPLIYAYGET--NIAITGK-GTIDGQGSN 162
Query: 197 QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQIMWS 221
+ WW +Y R++LL + R L+ +
Sbjct: 163 ETWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRVMTPEDGLRPQLINLYSC 222
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISV 275
+ +LI ++TL +SPFW +HP C+++T+R ++ +SC++++IE+C
Sbjct: 223 NTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRGPNGDGCDPESCKNVLIENCTFDT 282
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
GDD IAIKSG +Q G +G PS NI++R ++
Sbjct: 283 GDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMK 315
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 142/320 (44%), Gaps = 42/320 (13%)
Query: 9 RFHLHQNRPDLRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRP 68
++ L+ N DL + K +FT+ L + +N + G A
Sbjct: 29 KYLLYLNSTDLGKV-------DKNVFTIKNLDPDKEYSVSIKN--------IETGDADEI 73
Query: 69 IPRLRP--AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
+ R +P A N+ DFG GDG ++T + Q A+ + GG++ G +LT P
Sbjct: 74 VLRTKPETAYINVRDFGANGDGKRIDTFSIQAAIISCPD-----GGRVFFHEGIYLTYPL 128
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGPR-FGSFIHGQ 178
L S++TL L A +L + + +P++P SY E F S I G
Sbjct: 129 FLKSNITLELGKGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGI 188
Query: 179 NLKDVVITGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPF 236
+++V I G GTI+G WW + K + R + + ++LI IT+++SP
Sbjct: 189 GVENVNIIGE-GTIDGNSSFDTWWHDAKVKRIA-WRPRTIFLNKCKNVLIEGITIKNSPS 246
Query: 237 WTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
WT+HP +N+ N I + +SC+D+VI SVGDD IAIKSG
Sbjct: 247 WTIHPLLSQNLKFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLA 306
Query: 289 YGIAYGRPSMNILIRNLVVR 308
S N+ IRN ++
Sbjct: 307 TSRKLPVSSENLYIRNCLME 326
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 56/297 (18%)
Query: 61 RWGVASRPIPRLRPA-----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLN 115
+W A + I ++P +F++TDFG NT A A+ A + GGG++
Sbjct: 46 QWQQADQIIAAIKPVKFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVL 102
Query: 116 VPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
+P GR+ T +L S++ L LADD + + K++ +P + + G E G + I
Sbjct: 103 IPGGRFETGAIHLKSNVNLHLADDTVLSFYTDRKHY--LPYVMTRWEGVELMG--YSPLI 158
Query: 176 HGQNLKDVVITGHNGTINGQG--QAWWK-------------------KYRQKLL------ 208
+ +++ +TG NG + G G AWW K R L
Sbjct: 159 YAYQQENIALTG-NGILEGNGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERG 217
Query: 209 ----------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
N R P +Q +LI +T+R+SPFW ++P ++V +RN
Sbjct: 218 VPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG 277
Query: 255 --SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
S +SC ++IE+C GDD IA+KSG + G P N++I++ ++R+
Sbjct: 278 PNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRA 334
>gi|345300045|ref|YP_004829403.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093982|gb|AEN65618.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 441
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 103 ISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY 162
+ +L GGG L V PG +LT L+SH+TL L A +LA E+ +
Sbjct: 26 LDELAMSGGGTLVVTPGLYLTGTLVLSSHITLHLEAGARLLASHREEDY-------QAAV 78
Query: 163 GREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK------YRQKLLNNTRGPLV 216
+ + I+ ++ + V ++G G I+G AW++ YRQ TR P +
Sbjct: 79 TQSMAELSHMALIYARDARGVTLSGA-GCIDGNATAWFEPQADAQGYRQP---KTRRPRL 134
Query: 217 QIMWSSD-ILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMV 267
+ S + + ISNITL DSP WT H C +V IRN I + DSC+ +
Sbjct: 135 VVFESCEQVRISNITLYDSPMWTAHLVSCNHVFIRNLTIDNDLALSNTDALDIDSCQHVH 194
Query: 268 IEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I D Y S DD I +K+ + +P N+ + N ++RS
Sbjct: 195 ISDSYFSAADDGICLKTTAKAPELQ--QPVYNVTVNNCIIRS 234
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 43/262 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +T +G LNT+AF +A+ A ++ GGG++ VP G W T P +L SH+ LFL
Sbjct: 36 FPITKYGARKGNNHLNTQAFAKAIEACNR---AGGGRVVVPAGEWFTGPIHLKSHVNLFL 92
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT---IN 193
+ A + +N + +P + + G E + + I+ ++V I+G GT +
Sbjct: 93 EEGAVVRFSDNPNDY--LPAVMTSWEGLECYN--YSPLIYAFECENVGISG-KGTLAPVM 147
Query: 194 GQGQAWWK----------------------KYRQ--KLLNNTRGPLVQIMWSSDILISNI 229
+ W+K K RQ K N+ R L+ +IL+ +
Sbjct: 148 DTWRTWFKRPEAHLNALRQLYSMGSTDVPVKQRQMAKGENHLRPHLIHFNRCKNILLEDF 207
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R SPFWT+H Y C + +R+ + I L + + +IE+C GDDA+ I
Sbjct: 208 HIRQSPFWTIHLYLCNSGVVRHLDVQAHGHNNDGIDL-EMSRNFLIENCKFDQGDDAVVI 266
Query: 283 KSGWDQYGIAYGRPSMNILIRN 304
K+G +Q PS NI++R+
Sbjct: 267 KAGRNQDAWRLNTPSENIVVRD 288
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G NT+A A+ A ++ GGG++ VP G WLT P + S++ L L
Sbjct: 52 FPITDYGAQPGGEADNTKAIAAAIEACNQ---AGGGRVVVPAGTWLTGPIHFKSNVNLCL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V ITG GT+ +
Sbjct: 109 EENAVLNFTDNPSDY--LPTVMTSWEGLECYN--YSPLLYAFECENVAITGK-GTLQPKM 163
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 164 DTWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGENHLRPHLIHFNRCKNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R+SPFWT+H Y C +RN + F+ + ++EDC GDDA+ IK
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKAHGHNNDGIDFEMSRNFLVEDCSFDQGDDAVVIK 283
Query: 284 SGWDQYGIAYGRPSMNILIRNLVV 307
+G +Q P NI+IRN +
Sbjct: 284 AGRNQDAWRLNTPCENIVIRNCQI 307
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 126/279 (45%), Gaps = 50/279 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
IP F +T++ D +L TEA RA+ S +GGG + +P G + TAP L
Sbjct: 41 IPTFPDKTFIITEYYNGTD--SLYTEAISRAIDTCSA---QGGGTVLIPNGTYRTAPIRL 95
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L L+D + + + L P + + G + H I+ ++ +TG
Sbjct: 96 KSNVNLHLSDSTVLQFVTDPA---LFPTVLTRIEGIDCHN--VSPLIYAYGETNIALTGK 150
Query: 189 NGTINGQGQA--WWKKYRQKLLN------NTRGPLVQIMWSS------------------ 222
G ++GQ W+ R K ++ N + L Q+M S
Sbjct: 151 -GILDGQADTSNWFSPARLKSIDENGKEINEKTLLYQMMKDSIPASRRVFAGEKGIRPQF 209
Query: 223 -------DILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIE 269
+IL+ TL SPFW +HP +N+T+R + +SC++++I+
Sbjct: 210 INLYKCKNILLEGFTLHRSPFWLIHPLLSENITVRKVILQSHGRNNDGCDPESCKNVLID 269
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
C GDD IAIKSG D+ G + PS NI++RN +++
Sbjct: 270 SCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCLMK 308
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYW 151
TE Q + GG + VP G W + +L S++ L+L + I + E Y
Sbjct: 8 TEGNQNVIQEAVDRLPASGGTVIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCMEDY- 66
Query: 152 PLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW--KKYRQKLLN 209
+PP+ + G E + + I+ + ++V I G G ++G G AWW KK +Q +
Sbjct: 67 --LPPVFTRWEGVECY--NYSPLIYAADCENVTICG-TGVLDGAGSAWWHWKKLQQNAAD 121
Query: 210 NT----------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
+ R +Q + + + + T+ D P WT+HP C++V
Sbjct: 122 HLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDV 181
Query: 248 TIRNAFISKIQLF------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
+R ++ DSC ++IEDC GDD IAI SG ++ G GRP I
Sbjct: 182 VVRGVTVNTKGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIE 241
Query: 302 IRNL 305
++N
Sbjct: 242 VKNC 245
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 28/255 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
N+ +FG GDGV +T Q A+ + K G++ +P G + + L S + L
Sbjct: 80 VTLNVKEFGAKGDGVHDDTTMIQCAINSCPK-----NGRVLIPEGCYKISTLFLKSDLRL 134
Query: 135 FLADDAEILAIENEKYWPLMP-------PLPSYGYGREHHGP--RFGSFIHGQNLKDVVI 185
L A + A + +P++P Y G P F I G N+ +V I
Sbjct: 135 ELGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITGINVSNVEI 194
Query: 186 TGHNGTINGQGQA--WWKKYRQKLLNNT-RGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
TG GTI+G WW K+ N R L+ + ++I + IT+++SP W +HPY
Sbjct: 195 TGE-GTIDGCADETNWWN--NPKVRNIAWRPRLIFLNHCNNITVQGITVKNSPCWNIHPY 251
Query: 243 ---DCK--NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
D K ++TI N S D SC++++I Y S+GDD IAIKSG G +
Sbjct: 252 FSDDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHK 311
Query: 295 RPSMNILIRNLVVRS 309
RPS N+ IR +R
Sbjct: 312 RPSENLEIRQCCMRD 326
>gi|395804712|ref|ZP_10483947.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433100|gb|EJF99058.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 509
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 47/256 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ +G VGDG TLNT+A Q+A+ A +K GG++ G +L+ L S++ LF
Sbjct: 24 FDIKKYGAVGDGKTLNTKAIQKAIDAANK---SKGGRILFSKGTFLSGSIVLKSNVELFF 80
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+DA +L N +P ++ G R + I K++ + G G INGQG
Sbjct: 81 EEDAVLLGSTNPDDYP------------KYEGIR--ALIIAAESKNMAVKGK-GIINGQG 125
Query: 197 QAWW----------------KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
+ YR+ + RG L+ + I +++ITL++SP WT
Sbjct: 126 RELALAIDSLHHTGVRIDPKYNYRRMRPEDGRGKLISFVKCDSITMTDITLKNSPGWTQC 185
Query: 241 PYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
+CKN+ I + D CE++ I +C ++ DD I +KS
Sbjct: 186 FRECKNIVIDFMKVESRAYWNNDGIDVDGCENVRITNCNVNTADDGICLKSE------VP 239
Query: 294 GRPSMNILIRNLVVRS 309
G + NI I N +RS
Sbjct: 240 GLHNNNIYIGNCTIRS 255
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 50/274 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG D T + + AI GGG + VP G + T P L S++ F +
Sbjct: 50 ITDFGAKPD--TPDAPCHEAINQAIVTCCLNGGGTVIVPKGTFYTGPITLKSNVN-FHVE 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-- 196
+ IL ++ P + + G + + R + +G+ ++ ITG GTI+GQG
Sbjct: 107 EGAILKFSTDQSL-YFPGVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDGQGSN 162
Query: 197 QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQIMWS 221
WW +Y R++LL + R L+ +
Sbjct: 163 DTWWPMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRVMTPEDGLRPQLINLYSC 222
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDMVIEDCYISV 275
+ +LI ++TL +SPFW +HP C+++ +R ++ +SC++++IE+C
Sbjct: 223 NTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYNRGPNGDGCDPESCKNVLIENCTFDT 282
Query: 276 GDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
GDD IAIKSG +Q G +G PS NI++R ++
Sbjct: 283 GDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKK 316
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 43/265 (16%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G G NT+A A+ A K GGG++ VP G WLT P + S++ L+L
Sbjct: 52 FLITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYL 108
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + +N + +P + + G E + + ++ ++V I G GT+ +
Sbjct: 109 EENAILNFTDNPSDY--LPAVMTSWEGLECYN--YSPLLYAFECENVAIIG-KGTLQPKM 163
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ ++L+
Sbjct: 164 DTWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGENHLRPHLIHFNRCKNVLLDGF 223
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIEDCYISVGDDAIAI 282
+R+SPFWT+H Y C +RN + I F+ + ++EDC GDDA+ I
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKAHGDNNDGID-FEMSRNFLVEDCSFDQGDDAVVI 282
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVV 307
K+G +Q P NI+IRN +
Sbjct: 283 KAGRNQDAWRLNTPCENIVIRNCQI 307
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 43/273 (15%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
AS PR+ F+ FGG DG + A Q+A+ A + GGG++ + PG W +
Sbjct: 45 AASIEAPRIPDRGFDPARFGGRADGRSDARPAIQKAIDAAHR---AGGGRVTLSPGVWFS 101
Query: 124 -APFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
P L SH+ L + A +L + E + Y +PP+ + G E + + FI+ ++
Sbjct: 102 RGPVRLKSHVELRVEAGATLLFSPEPDDY---LPPVKTRWEGTEVY--TYSPFIYAAGVE 156
Query: 182 DVVITGHNGTINGQGQ----AW-------WKKYRQKLLNNT-------------RGPLVQ 217
DV ITG G I+G Q AW +++ R+ R PL+Q
Sbjct: 157 DVAITG-GGVIDGNAQSRFHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQ 215
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-------IQLFDSCEDMVIED 270
+ + + T R+SPFW H V +R + + + +S ++IE+
Sbjct: 216 VFGGKRVRLEGFTARNSPFWVNHLVYADEVVVRGITVDSHFPNNDGVDV-ESSTRVLIEN 274
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
GDD++ IKSG D G GRPS +L+R
Sbjct: 275 SRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVR 307
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 52/277 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P FN+ +G GDG + +T AF++A+ A +K G GG++ VPPG ++T L
Sbjct: 42 PSFPNRTFNIKRYGAAGDGKSDSTAAFKKAIEAANKAG---GGRVVVPPGIYVTGAIYLK 98
Query: 130 SHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L + A I +N +KY +P + + G E + + I+ N K++ ITG
Sbjct: 99 SNVNLHVMKKATIKFSQNPDKY---LPAVLTRWEGVELY--NYSPLIYAYNEKNIAITGE 153
Query: 189 NGTINGQG--QAWW----------------KKYRQKLL------------------NNTR 212
GT++GQG + WW ++ + LL + R
Sbjct: 154 -GTLDGQGDNEHWWPWKGKKEFGWKEGEPNQQQDRDLLFKMAEEKVPVKERVFGKGHYLR 212
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDM 266
+Q S +I+I +T+ +SP W ++P +N+ I + I + +S +++
Sbjct: 213 PSFIQPYHSKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIGHGPNNDGVDPESSKNV 272
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
+I+D Y GDD IAIKSG + G PS NI+I
Sbjct: 273 LIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIE 309
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 27/253 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A ++ DFG GDG + +T + Q A+ + G+L P G +LTAP L SH+TL
Sbjct: 75 CAVSVRDFGAKGDGFSDDTVSIQTAINCLPN-----NGRLYFPEGVYLTAPIVLKSHITL 129
Query: 135 FLADDAEILAIENEKYWPLMPPLPS---------YGYGREHHGPRFGSFIHGQNLKDVVI 185
+++ A++L + ++ + ++P +G + P + I + +D+ I
Sbjct: 130 DISEKAKLLGLPDQSAYNVIPGTAKDIITGEDIHFGTWEGNAVPMHQALIFAEYAEDIRI 189
Query: 186 TGHNGTINGQGQA--WWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY- 242
G G I+G +A WW+ +++ N R L+ I + IT+ ++ W +HPY
Sbjct: 190 VGR-GVIDGNAEAGGWWENVKER--NIPRPRLLFFNRCKLITVHGITVCNAASWQIHPYF 246
Query: 243 -------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
D +++ + ++C+++ I C SVGDD IAIKSG G + +
Sbjct: 247 SSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQ 306
Query: 296 PSMNILIRNLVVR 308
P+ N IRN +++
Sbjct: 307 PAENHNIRNCLMQ 319
>gi|189461863|ref|ZP_03010648.1| hypothetical protein BACCOP_02529 [Bacteroides coprocola DSM 17136]
gi|189431457|gb|EDV00442.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 464
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++ +TD+G + D + T+ Q I K ++GGG + +P G +L+ + L+
Sbjct: 64 SYRITDYGVLNDSTIIQTQQIQAV---IDKASQEGGGVIYIPQGTFLSGSLFFKPNTHLY 120
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ + + ++ + ++ G ++ F + ++ + I+G G ING
Sbjct: 121 IEKEGTLKGSDDISDFAVIDTRME-GQNLKY----FAALVNAIGVDGFTISGE-GRINGN 174
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G +WK + R+++ L R LV I S D+ +S + L +SPFWT H Y C+NV
Sbjct: 175 GLRYWKSFWLRRQVNPKCTNLEELRPRLVHIADSKDVQLSGVRLENSPFWTTHLYRCENV 234
Query: 248 TIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG---WDQYGIAY 293
+ N I S D C ++++++CY+SV DDA+A+K G W
Sbjct: 235 QLLNLHIFAPHFPVKAPSSDAIDIDVCTNVLVKNCYMSVNDDAVALKGGKGPWADQDKEN 294
Query: 294 GRPSMNILIRNLV 306
+ NI+I + V
Sbjct: 295 NGANRNIIIEDCV 307
>gi|393789553|ref|ZP_10377674.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
gi|392651001|gb|EIY44667.1| hypothetical protein HMPREF1068_03954 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++T G GDG T NT Q+A I GG +NVPPG++LT + S++ L L
Sbjct: 23 DITTLGAKGDGTTNNTALIQKA---IDDCSAHNGGTVNVPPGQFLTGTLFIKSNVNLHLD 79
Query: 138 DDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
AE+L + + + Y P L G + I + ++ ITG GTINGQG
Sbjct: 80 FGAELLGSTDLDSYHKAFPGL---------KGKETPAIIFAREASNIAITGF-GTINGQG 129
Query: 197 QAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI- 254
++ + P ++ + ++ + ++TLR+S +WT C V IR +
Sbjct: 130 AHPNFQHGNDSKGGPKRPKIIYFIGCKNVRVQDVTLRNSAYWTQDYEKCDGVVIRGVKVY 189
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ L ++VI DCYI DDA+ +KS D P N+ + N V++S
Sbjct: 190 SHVNWNNDGLDIDSRNVVISDCYIDCDDDALCLKSDTDT-------PCENVTVTNCVLKS 242
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 120/259 (46%), Gaps = 33/259 (12%)
Query: 67 RP-IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAP 125
RP +P + F LTDFG VGDG TLNTEAF RA+ A++ K GGG+L VP G + T P
Sbjct: 78 RPALPVIPERTFRLTDFGAVGDGTTLNTEAFARAIAAVA---KAGGGKLVVPAGTFRTGP 134
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPR-FGSFIHGQNLKDVV 184
F L S + L L A I A W L P + + IHG+ L DV
Sbjct: 135 FALCSSLELHLEAGALIQAPATFADWGLPEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVA 194
Query: 185 ITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQ-------IMWSSDILISNITLRDSPFW 237
ITG +G I+G G WW + ++ RG LV I + ++++TL +S +
Sbjct: 195 ITG-SGQIDGNGALWW-AWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMF 252
Query: 238 TLHPYDCKNVTIRNAFISKIQLFDSCEDMV--------IEDCYISVGDDAIAIKSGWDQY 289
L P ++TI + + + + + I C I GDD I IKSG
Sbjct: 253 HLVPRRITDLTIERVKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSG---- 308
Query: 290 GIAYGRPSMNILIRNLVVR 308
NILI + V++
Sbjct: 309 -------GTNILIEDCVIK 320
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 39/266 (14%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT-APFNL 128
P + + +TDFG VGDG T++ AI+ GGG++ +P G W + P +L
Sbjct: 49 PSIPDRDYLVTDFGAVGDG---RTDSHDAITAAIAAAHTDGGGRVVLPEGTWRSDGPLHL 105
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
SH+ L ++D A ++ + + +P + + G E +G + I+ ++ DV ITG
Sbjct: 106 ESHIELHVSDGAHLIFGPDPADY--LPAVHTRWEGTEMYG--YSPLIYAHDVHDVAITG- 160
Query: 189 NGTINGQGQAWWKKYRQKLLNNT------------------------RGPLVQIMWSSDI 224
NG I+G + + + K + R ++QI + +
Sbjct: 161 NGVIDGNPDSEFHTWTDKQDADVQALRRMGFDGVPLEQRQFGEGHHLRPSMIQIFDAERV 220
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQ------LFDSCEDMVIEDCYISVGDD 278
L+++ T+R+SPFW H + +R + DS D++IE GDD
Sbjct: 221 LLADYTVRNSPFWINHLVYTDDAVVRGLTVDSHNPNNDGVDVDSSTDVLIEHNTFRTGDD 280
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRN 304
++ +KSG D+ G GRPS N+++R+
Sbjct: 281 SVVVKSGRDKDGRDIGRPSRNVVVRH 306
>gi|378582005|ref|ZP_09830645.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815320|gb|EHT98435.1| putative polygalacturonase protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 443
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 35/250 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF DG T +T+A QRA I ++ + GGG+L +PP R+ + NL S+ L L
Sbjct: 3 LSLADFHPAADGETPDTQALQRA---IDQIAEAGGGRLTLPPVRYRSGSLNLPSNFELHL 59
Query: 137 ADDAEILA---IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
A A ++A + + + W + + H ++ +++ I+G G I
Sbjct: 60 AAGAVLIASRHLADYQQWKTL------SSAEKSH----NVLLYALGQRNLTISG-KGRIE 108
Query: 194 GQGQAWW------KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G +AW+ + YR + R ++ + + + TL +P WT+H C++V
Sbjct: 109 GDAEAWFAVEADEQGYRMPRADRPR--MIVFEDCEQVTLKDFTLFQAPMWTVHLVSCRHV 166
Query: 248 -----TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
TI NA + DSCE ++I + Y S DDAI IK+ + RP+
Sbjct: 167 HIDHLTIDNAMTLPNTDALDIDSCEAVLISNSYFSAADDAICIKTTLKPGSLR--RPARR 224
Query: 300 ILIRNLVVRS 309
I I N ++RS
Sbjct: 225 IAISNCLLRS 234
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 28/252 (11%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
N+ +FG GDG+ +T Q A+ A K G++ +P G + L SH+ L L
Sbjct: 82 NVKEFGAKGDGLQDDTGFIQAAILACPK-----NGRVLIPKGTYRITSLFLKSHIRLELG 136
Query: 138 DDAEILAIENEKY-WPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVITG 187
A ILA + +++ +P +P + SY +++ P F I+G +++VVI G
Sbjct: 137 AGA-ILAADTDRFKYPRLPGMIESYDETEDYNLGTWEGNPLPMFAGIINGIEVENVVIYG 195
Query: 188 HNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G I+GQ + WWK + R +V + DI + L++SP W LHPY +
Sbjct: 196 E-GLIDGQASFENWWKDA-GTMRGAFRPRMVFLERCKDITLQGFYLKNSPAWVLHPYFSQ 253
Query: 246 -----NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
++ I N S D SC+D+ I + S+GDD IA+KSG G Y PS
Sbjct: 254 GLRFLDLDIENPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPS 313
Query: 298 MNILIRNLVVRS 309
NI IR ++ +
Sbjct: 314 ENIEIRQCLMEN 325
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 27/254 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DFG GDG +++ A Q A+ A K G ++ P G + T P L SH+T+
Sbjct: 79 ALLNIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTPIFLKSHITI 133
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHH----------GPRFGSFIHGQNLKDVV 184
L + A +L +P++P + E+ + S + G ++DV
Sbjct: 134 ELMEGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVEDVR 193
Query: 185 ITGHNGTINGQGQ--AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
I G GT++G GQ WW + K R + ++ DIL+ IT+++SP WT+HP
Sbjct: 194 IIGE-GTLDGNGQNGDWWINCKVKR-EAWRPRSLYLLECHDILVEGITIKNSPSWTVHPI 251
Query: 243 DCK-----NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
N+T+ N S D SC + I S+GDD IAIKSG +
Sbjct: 252 RSSKLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKER 311
Query: 295 RPSMNILIRNLVVR 308
RPS NI+IRN +++
Sbjct: 312 RPSENIIIRNCLMQ 325
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 59/295 (20%)
Query: 65 ASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
+S +P FN+ DFG G+ T NT A A I +GGGQ+ +P G+++T
Sbjct: 51 SSIKVPSFPDKTFNIIDFGANGNNKTNNTVAINNA---IKSCNAQGGGQVIIPQGQFITG 107
Query: 125 PFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+L S++ L L + A + + E Y +P + + G E G + I+ +++
Sbjct: 108 AIHLLSNVNLHLEEGAILSFSTSPEDY---LPAVFTRWEGLEMMG--YSPLIYAFEQENI 162
Query: 184 VITGHNGTINGQGQ--AWW------------------------KKYRQKLLNNT------ 211
ITG G + G WW K R KL+ +
Sbjct: 163 AITGK-GILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPV 221
Query: 212 -----------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF 260
R P +Q +++LI IT+++SPFW ++P C +VT+ + S
Sbjct: 222 EQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSSHGPN 281
Query: 261 ------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC + I++C GDD IAIKSG + G S NI+I N ++
Sbjct: 282 SDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKE 336
>gi|325300092|ref|YP_004260009.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319645|gb|ADY37536.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 444
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A+ +TD+G V D + TE Q I K + GGG + +P G +L+ + L+
Sbjct: 51 AYRITDYGVVNDSTVIQTERIQAV---IDKASQAGGGVVYIPQGTYLSGSLFFKPNTHLY 107
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ + ++ + ++ + F + ++ + I+G G ING
Sbjct: 108 IEKGGTLKGSDDISNFKVIDTRM-----EGQNLKYFAALVNAIGVDGFTISGE-GRINGN 161
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G +WK + R+++ L R LV I S D+ +S + L +SPFWT H Y C+NV
Sbjct: 162 GLRYWKSFWLRRQVNPKCTNLEELRPRLVYIADSKDVQLSGVRLENSPFWTTHLYRCENV 221
Query: 248 TIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG---WDQYGIAY 293
+ N I S D C +++++ CY+SV DDAIA+K G W
Sbjct: 222 KLLNLSIFAPYAPVKAPSSDAIDIDVCTNVLVKGCYMSVNDDAIALKGGKGPWADQDKEN 281
Query: 294 GRPSMNILIRNLV 306
+ NI+I + +
Sbjct: 282 NGSNRNIIIEDCI 294
>gi|255035318|ref|YP_003085939.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948074|gb|ACT92774.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 442
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 28/231 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LT+ G D + T Q+ I + +GGG + VP G +L+ L+LAD
Sbjct: 55 LTEHGVGADSNVVQTARIQQV---IDRAHSQGGGVIVVPKGVFLSGALFFKPKTHLYLAD 111
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + + +P+MP G ++ F + ++ + I+G GTI+G G
Sbjct: 112 GAVLKGSDQIADYPMMPSRME-GQNLDY----FPALVNAYGVNGFTISGK-GTIDGNGLN 165
Query: 199 WWKKYRQKLLNN--------TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + Q+ N +R LV I S+D+ + ++ LR+S FWT H Y C N+ I
Sbjct: 166 YWKAFWQRRKENPNCTNLEVSRPRLVFIWKSNDVQVQDVKLRNSGFWTSHYYQCNNIKIL 225
Query: 251 NAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
N I+ D C +++++ CY++V DDAIA+K G Y
Sbjct: 226 NVTITAPHEPIKAPSTDAIDLDVCNNVLVKGCYLAVNDDAIALKGGKGPYA 276
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 83/306 (27%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + ++T FG + G LNTE+ +A I + KKGGG + +P G WL+ P L
Sbjct: 29 LPTFKKDTVSITAFGAISGGRHLNTESINQA---IDQTHKKGGGVVLIPAGVWLSGPITL 85
Query: 129 TSHMTLFLADDAEILAIEN-------EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
S++ L LA +A + ++ + W +P + R S I N +
Sbjct: 86 KSNINLHLAANALLQFTKDFSQYSLVQTSWEGIPQM------------RNQSPIWALNQQ 133
Query: 182 DVVITGHNGTINGQGQAW------------WKK--------------------------- 202
++ ITG G I+G G AW WKK
Sbjct: 134 NIAITGK-GVIDGNGDAWRMVKKAKMTETQWKKLISSGGVLNEKGDIWYPSQSSLKGASY 192
Query: 203 -------------YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
+ +++ + R ++ + IL+ +T ++S W +HP ++TI
Sbjct: 193 KDPGLVEKGKNAQFYEEIKDYLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTI 252
Query: 250 RNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIL 301
RN + +SC+++++E VGDDAI IKSG ++ G G P+ N+
Sbjct: 253 RNINVRNPWYSQNGDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLW 312
Query: 302 IRNLVV 307
+RN V
Sbjct: 313 VRNCTV 318
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 67 RPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPF 126
RP PR F++T +G VGDG T NT A + A+ A + GGG + VP GR++T
Sbjct: 59 RP-PRFPDRWFDITQYGAVGDGTTKNTAAIRAAITACHR---AGGGHVLVPAGRFVTGAI 114
Query: 127 NLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
+L + L +++ ILA + +P + + G E + F++ N + V +T
Sbjct: 115 HLRGGVDLHVSEGG-ILAFSPDPA-DYLPAVLTRWEGTECW--NYSPFVYAHNQRGVAVT 170
Query: 187 GHNGTINGQGQ--AWWKKYR--------QKLLNNT------------------RGPLVQI 218
G G ++GQ + W YR Q+LL R +VQ
Sbjct: 171 G-EGILDGQARRGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQF 229
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDSCED------MVIEDCY 272
D+LIS++T+ D P WT+HP C NVT+RN + + D + I C
Sbjct: 230 NRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLHNTDGVDPEASRLVHITGCR 289
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+ DD +A+K+G D+ G G PS +I++++
Sbjct: 290 FNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDC 322
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+L+ F N+ D G D T+ R + +SK +GGG + +P G+W +
Sbjct: 112 MPQLKRPVFPDFIVNMKDKGMTEDAPI--TDLVNRTIAEVSK---QGGGTVVIPEGKWKS 166
Query: 124 APFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
A L S++ L LA AEI A E Y +P + + G E GP +FI+ +
Sbjct: 167 ARIVLKSNVNLHLAKGAEIEFAGRAEDY---LPAVFTRHEGVEIMGP--AAFIYANGENN 221
Query: 183 VVITGHNGTING------------------QGQAWWKKYRQKLLNNTRG------PLVQI 218
+ ITG GTI G + W Q++ + G +
Sbjct: 222 IAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIEQRIYDGMEGRTFYRPKTISP 280
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDC 271
+ +++LI IT+ S W + P C+NV IR ++ ++ +SC++++IE C
Sbjct: 281 INCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNSTKVPSGDGIDIESCKNVLIEYC 340
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 341 TLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 372
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 44/286 (15%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
W + R++P F DF G + + AI + GGG++ VP G W
Sbjct: 428 WSDYEAVLARIQPPTFPDRDFPITDFGAKPDADCTDAIRAAIDACHQAGGGRVVVPAGEW 487
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
LT +L S++ L +A A + + + +P++ + F FI+ +
Sbjct: 488 LTGAIHLRSNVNLHVAKGATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIYAWEQE 542
Query: 182 DVVITGHNGTINGQGQ--AWW-------------KKYRQKLLN--NTRGPL--------- 215
++ ITG GT++G WW + R +L+ T P+
Sbjct: 543 NIAITGE-GTLDGGSDWSTWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERVFGAND 601
Query: 216 ------VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK----IQLFD--SC 263
VQ +ILI +++ SP W LHP +N+T+RN I+ FD SC
Sbjct: 602 FLRPNFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKITSHGPNNDGFDPESC 661
Query: 264 EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D+++ED GDD IAIKSG + G P+ N++IR V++
Sbjct: 662 RDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKD 707
>gi|427388107|ref|ZP_18883990.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
gi|425724690|gb|EKU87564.1| hypothetical protein HMPREF9447_05023 [Bacteroides oleiciplenus YIT
12058]
Length = 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++T G GDGVT NT Q+AV + KKGGG + +P G +L P L S+
Sbjct: 20 LIAGTIDVTKRGAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ L L +L + P G + G F GQ K++ ITG GT
Sbjct: 77 VNLHLDFGTLLLGSTRLSDYDHAFPFKD-GTMNQSSGLLFA---RGQ--KNISITGF-GT 129
Query: 192 INGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I+GQG ++ + P ++ + DI+++++TLR+S +W H C++VTIR
Sbjct: 130 IDGQGGDKAFQFGNDADGGPKRPKIIYFVECRDIVVTDVTLRNSAYWVQHYEKCEDVTIR 189
Query: 251 NAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
+++F C ++ I DCYI V DDAI KS ++ N
Sbjct: 190 G-----LKVFSHCNYNNDGLDIDAKNATISDCYIDVEDDAICFKSDHPEF-------CEN 237
Query: 300 ILIRNLVVRS 309
I + N V S
Sbjct: 238 ITVTNCVTAS 247
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 19/251 (7%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R A ++ DFG + + N A QR + A+ GG L +P GRWL+ P L S
Sbjct: 80 RQETALLDIRDFGASPE-ASNNAPAIQRTIAALPP-----GGTLRIPAGRWLSGPIFLKS 133
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPS----YGYGREHHGPRFGSFIHGQNLKDV-VI 185
HM L + D E+ AI + + +P++P + G + S I+ + + V +
Sbjct: 134 HMALLVEDGGELAAIASRENFPILPARHADGRILGTWEGVAEACYASLINAIDCRGVHLA 193
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G WW ++ R V + D+ +S +T+R+SP WT+HP CK
Sbjct: 194 GAGIIDGGGDRGDWWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCK 253
Query: 246 -----NVTIRNAFIS-KIQLF--DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
++TI N S F +S D+ + +ISVGDD IA+K+G RP+
Sbjct: 254 GLIAADLTIENDPDSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPT 313
Query: 298 MNILIRNLVVR 308
++ I N ++
Sbjct: 314 EHVRIENCLME 324
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 49/276 (17%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P FN+ D+G + DGV NT F + + S+ KGGG + +P G + T P +L
Sbjct: 50 PVFPNKTFNVMDYGAISDGVFDNTVVFNKTIKTCSE---KGGGMVLIPKGTYFTGPIHLD 106
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+++ L L++ AEI+ N K +PL + + G E + I+ N +V ITG
Sbjct: 107 NNVNLHLSEGAEIVFSTNPKDYPL---VHTSFEGTELM--NYSPLIYAYNKTNVAITGK- 160
Query: 190 GTINGQG--QAWW----------------KKYRQKLLNNTRG----------------PL 215
G +NG+ WW + +Q + + +G
Sbjct: 161 GILNGKASNDNWWPWCGKSVYGWKKGDPIQNVKQLMESAEKGMAVKDRVFGDGNYLRPNF 220
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCE-----DMVIE 269
++ ++ + + + ++PFW +HP +V + I S D C+ +++I
Sbjct: 221 IEFFECKNVHLKDFKIVNAPFWIIHPIKSNHVIVDGIHIESHGPNNDGCDPEYSKNVIIR 280
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
+C GDD IAIK+G D G S NILI+N
Sbjct: 281 NCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNC 316
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 56/297 (18%)
Query: 61 RWGVASRPIPRLRPA-----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLN 115
+W A + I ++P +F++TDFG NT A A+ A + GGG++
Sbjct: 46 QWQQADQIIAAIKPVTFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVL 102
Query: 116 VPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
+P GR+ T +L S++ L LADD + + +++ +P + + G E G + I
Sbjct: 103 IPGGRFETGAIHLKSNVNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLI 158
Query: 176 HGQNLKDVVITGHNGTINGQG--QAWWK-------------------KYRQKLL------ 208
+ +++ +TG NG + G G AWW K R L
Sbjct: 159 YAYQQENIALTG-NGILEGNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERG 217
Query: 209 ----------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
N R P +Q +LI +T+R+SPFW ++P ++V +RN
Sbjct: 218 VPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG 277
Query: 255 --SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
S +SC ++IE+C GDD IA+KSG + G P N++I++ ++R+
Sbjct: 278 PNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRA 334
>gi|212693937|ref|ZP_03302065.1| hypothetical protein BACDOR_03461 [Bacteroides dorei DSM 17855]
gi|212663469|gb|EEB24043.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 453
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 49 QRNAVVGGFSFLRWGVASRPI-PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG 107
++N G W + ++ + P ++L+D+G + + T+ Q+ I +
Sbjct: 33 KQNVFPDGTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKI---IDEAA 89
Query: 108 KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
GGG + +P G + + L+L+ A +L EN +PL+ Y +
Sbjct: 90 ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENIMDFPLLMTRIEGEYCK--- 146
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--------LNNTRGPLVQIM 219
FG+ I+ L I+G GTI+G G +WK +R + + R L+ I
Sbjct: 147 --YFGALINADGLDTFTISG-KGTIDGNGTPYWKAFRLRREWNPQCTNKDEMRPRLLYIA 203
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVT------------IRNAFISKIQLFDSCEDMV 267
++ ++++TL++SPFWT H Y C V I++A I + D C +
Sbjct: 204 HCRNVQVADVTLQNSPFWTSHYYRCDKVKLLNLRIFSPIKPIKSASADGIDM-DVCTNFH 262
Query: 268 IEDCYISVGDDAIAIKSGWDQYG--IAYGRPSMNILIRNL 305
I+ C +V DDAI K G Y Y P+ NILI +
Sbjct: 263 IKGCRFTVNDDAICFKGGKGPYADQDTYNGPNKNILIEDC 302
>gi|265751211|ref|ZP_06087274.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263238107|gb|EEZ23557.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 435
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 49 QRNAVVGGFSFLRWGVASRPI-PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG 107
++N G W + ++ + P ++L+D+G + + T+ Q+ I +
Sbjct: 15 KQNVFPDGTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKI---IDEAA 71
Query: 108 KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
GGG + +P G + + L+L+ A +L EN +PL+ Y +
Sbjct: 72 ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENIMDFPLLMTRIEGEYCK--- 128
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--------LNNTRGPLVQIM 219
FG+ I+ L I+G GTI+G G +WK +R + + R L+ I
Sbjct: 129 --YFGALINADGLDTFTISG-KGTIDGNGTPYWKAFRLRREWNPQCTNKDEMRPRLLYIA 185
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVT------------IRNAFISKIQLFDSCEDMV 267
++ ++++TL++SPFWT H Y C V I++A I + D C +
Sbjct: 186 HCRNVQVADVTLQNSPFWTSHYYRCDKVKLLNLRIFSPIKPIKSASADGIDM-DVCTNFH 244
Query: 268 IEDCYISVGDDAIAIKSGWDQYG--IAYGRPSMNILIRNL 305
I+ C +V DDAI K G Y Y P+ NILI +
Sbjct: 245 IKGCRFTVNDDAICFKGGKGPYADQDTYNGPNKNILIEDC 284
>gi|345516873|ref|ZP_08796358.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423228584|ref|ZP_17214990.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|423239702|ref|ZP_17220818.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
gi|423243850|ref|ZP_17224926.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|345455412|gb|EEO47835.2| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|392635892|gb|EIY29784.1| hypothetical protein HMPREF1063_00810 [Bacteroides dorei
CL02T00C15]
gi|392643888|gb|EIY37635.1| hypothetical protein HMPREF1064_01132 [Bacteroides dorei
CL02T12C06]
gi|392645742|gb|EIY39465.1| hypothetical protein HMPREF1065_01441 [Bacteroides dorei
CL03T12C01]
Length = 445
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 49 QRNAVVGGFSFLRWGVASRPI-PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG 107
++N G W + ++ + P ++L+D+G + + T+ Q+ I +
Sbjct: 25 KQNVFPDGTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKI---IDEAA 81
Query: 108 KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
GGG + +P G + + L+L+ A +L EN +PL+ Y +
Sbjct: 82 ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENIMDFPLLMTRIEGEYCK--- 138
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--------LNNTRGPLVQIM 219
FG+ I+ L I+G GTI+G G +WK +R + + R L+ I
Sbjct: 139 --YFGALINADGLDTFTISG-KGTIDGNGTPYWKAFRLRREWNPQCTNKDEMRPRLLYIA 195
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVT------------IRNAFISKIQLFDSCEDMV 267
++ ++++TL++SPFWT H Y C V I++A I + D C +
Sbjct: 196 HCRNVQVADVTLQNSPFWTSHYYRCDKVKLLNLRIFSPIKPIKSASADGIDM-DVCTNFH 254
Query: 268 IEDCYISVGDDAIAIKSGWDQYG--IAYGRPSMNILIRNL 305
I+ C +V DDAI K G Y Y P+ NILI +
Sbjct: 255 IKGCRFTVNDDAICFKGGKGPYADQDTYNGPNKNILIEDC 294
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%)
Query: 157 LPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLV 216
L SYG GR+ RF S I G NL DV+ITG+NGTI+GQG WW K+ + L TR ++
Sbjct: 1075 LYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFHKGELKLTRPYMI 1134
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
+IM+S I ISN+TL +SP W +HP ++ I+ I
Sbjct: 1135 EIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTI 1172
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 56/297 (18%)
Query: 61 RWGVASRPIPRLRPA-----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLN 115
+W A + I ++P +F++TDFG NT A A+ A + GGG++
Sbjct: 46 QWQQADQIIAAIKPVKFPDRSFSITDFGAAAKAGFDNTAAIAAAIAACAA---AGGGRVL 102
Query: 116 VPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFI 175
+P GR+ T +L S++ L LADD + + +++ +P + + G E G + I
Sbjct: 103 IPGGRFETGAIHLKSNVNLHLADDTVLSFYTDREHY--LPYVMTRWEGVELMG--YSPLI 158
Query: 176 HGQNLKDVVITGHNGTINGQG--QAWWK-------------------KYRQKLL------ 208
+ +++ +TG NG + G G AWW K R L
Sbjct: 159 YAYQQENIALTG-NGILEGNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERG 217
Query: 209 ----------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---- 254
N R P +Q +LI +T+R+SPFW ++P ++V +RN
Sbjct: 218 VPVSERVFNENFLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG 277
Query: 255 --SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
S +SC ++IE+C GDD IA+KSG + G P N++I++ ++R+
Sbjct: 278 PNSDGCNPESCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRA 334
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 62/280 (22%)
Query: 79 LTDFGGVGDGVTLNT-EAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
+TDFG D EA RA+ S GGG + VP G + T P L S++ F
Sbjct: 50 ITDFGAQPDTPDEPCHEAINRAILTCSL---NGGGTVVVPKGTFHTGPITLKSNVN-FHV 105
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG- 196
++ +L ++ P + + G + + R + +G+ ++ ITG GTI+GQG
Sbjct: 106 EEGAVLKFSTDQSL-YFPAVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDGQGS 161
Query: 197 -QAWW-----KKY-------------RQKLL-----------------NNTRGPLVQIMW 220
+ WW +Y R++LL + R L+ +
Sbjct: 162 NETWWPMCGASRYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMKPEDGMRPQLINLYS 221
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIE 269
+ +LI ++TL +SPFW +HP C+++ +R + +F +SC++++IE
Sbjct: 222 CNTVLIEDVTLLNSPFWVIHPLFCESLIVRG-----VHVFNRGPNGDGCDPESCKNVLIE 276
Query: 270 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+C GDD IAIKSG +Q G + PS NI++R +++
Sbjct: 277 NCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKN 316
>gi|440761134|ref|ZP_20940226.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425064|gb|ELP22809.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T QRA + ++ GGG+L +P GR+ + NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + L + H ++ +++ I+G G I+G+G
Sbjct: 60 EAGAVLIASPRLADYQAVQAL---SCAEKSH----NVLLYALGQRNITISG-TGRIDGEG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
+AW+ R +L R ++ + ++ T+ +P WT+H C++V
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + D CE + + + Y+S DDAI IK+ A RP+ I+I N
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 30/255 (11%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ +FG GDG +T A Q A+ A K ++ VP G + + L ++ L
Sbjct: 81 TLNVREFGAYGDGEHDDTNAIQCAIMAAPK-----DSRVLVPEGVYKISSIFLKDNLNLE 135
Query: 136 LADDAEILAIENEKYWPLMP-------PLPSYGYGREHHGP--RFGSFIHGQNLKDVVIT 186
LA A + A + +P++P Y G P F + + G N +V IT
Sbjct: 136 LAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIVCGINCSNVTIT 195
Query: 187 GHNGTING--QGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
G GTI+G WWK + + NT R L I S++ + IT+++SP WT+HPY
Sbjct: 196 GE-GTIDGCTTHDNWWKNCK---IRNTAWRPRLFFINNCSNVTMHGITVQNSPSWTIHPY 251
Query: 243 --------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
D K + N+ + +SC+D+++ YISVGDD IAIKSG
Sbjct: 252 FSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYMAQKEK 311
Query: 295 RPSMNILIRNLVVRS 309
P+ ++ +R +R
Sbjct: 312 TPTEDMTVRQCCMRD 326
>gi|304398511|ref|ZP_07380384.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304354016|gb|EFM18390.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 443
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 25/245 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T QRA + ++ GGG+L +P GR+ + NL S L L
Sbjct: 3 LSLADFHPVADGETPDTAVLQRA---MDQIAAAGGGRLTLPAGRYRSGCLNLPSDFELHL 59
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A ++A + + L + H ++ +++ I+G G I+G+G
Sbjct: 60 EAGAVLIASPRLADYQAVQAL---SCAEKSH----NVLLYALGQRNITISG-TGRIDGEG 111
Query: 197 QAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV----- 247
+AW+ R +L R ++ + ++ T+ +P WT+H C++V
Sbjct: 112 EAWFAAERDEQGYRLPRPDRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHL 171
Query: 248 TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
TI NA + D CE + + + Y+S DDAI IK+ A RP+ I+I N
Sbjct: 172 TIDNAMTMPNTDALDIDGCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITN 229
Query: 305 LVVRS 309
++RS
Sbjct: 230 CLLRS 234
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 48/247 (19%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
AI+K+G GG +L + G LT P NL S++T+ DA I N + L P+ +
Sbjct: 22 AINKIGDSGG-ELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNNPE---LYTPVWTRW 77
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---------- 211
G E + ++ +++VI G G ++G G +WW K+R +
Sbjct: 78 EGIECYA--MHPLMYANGKENIVIRGK-GVVDGSGSSWWDKFRNIEQEDRTLPREKYELD 134
Query: 212 -----------------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
R PL+Q DI +S+ TL +SPFWTLH ++
Sbjct: 135 LAKLNPDYKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKIS 194
Query: 249 IRN--------AFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
I N A + DS ED+ +++C + VGDD + +KSG + GI +P+ N+
Sbjct: 195 IDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNV 254
Query: 301 LIRNLVV 307
+ + +
Sbjct: 255 KVSDCRI 261
>gi|393785428|ref|ZP_10373579.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
gi|392662401|gb|EIY55961.1| hypothetical protein HMPREF1071_04447 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 28/240 (11%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++T G GDG+T NT Q+A I + GG + +P G +LT L S++ L L
Sbjct: 24 DITTLGAKGDGITDNTAFIQKA---IDDCSARKGGTVEIPSGHFLTRTLFLKSNVNLHLH 80
Query: 138 DDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
AE+L + + + Y + P L G + I + + ++ ITG +GTINGQG
Sbjct: 81 FGAELLGSTDLDSYHKVFPELK---------GKESPALIFARGVANIAITG-SGTINGQG 130
Query: 197 QAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI- 254
++ R P ++ + +++ + ++TLR+S +WT C V +R +
Sbjct: 131 AHQNFQHGNDSKGGPRRPKIIYFIGCNNVRVQDVTLRNSAYWTQDYEKCNGVIVRGVKVY 190
Query: 255 -----SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ L ++V+ DCYI DDA+ +KS D P N+ + N V++S
Sbjct: 191 SHANWNNDGLDIDSRNVVVSDCYIDCDDDALCLKSDTDT-------PCENVTVTNCVLKS 243
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 60/279 (21%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG D T + + AI GGG + VP G + T P L S++ F +
Sbjct: 50 ITDFGAKPD--TPDEPCHEAINQAIVTCSLNGGGTVVVPKGTFHTGPVTLKSNVN-FHVE 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-- 196
+ +L ++ P + + G + + R + +G+ ++ ITG GTI+GQG
Sbjct: 107 EGAVLKFSTDQSL-YFPAVITRWEGLDCYNARPLIYAYGET--NIAITGK-GTIDGQGSN 162
Query: 197 QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQIMWS 221
+ WW +Y R++LL + R L+ +
Sbjct: 163 ETWWSMCGAPRYGWKEGMVAQRNGGRERLLMYGETSTPIYKRIMKPEDGMRPQLINLYSC 222
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIED 270
+ +LI ++TL +SPFW +HP C+++ +R + +F +SC++++IE+
Sbjct: 223 NTVLIEDVTLLNSPFWVIHPLFCESLIVRG-----VHVFNRGPNGDGCDPESCKNVLIEN 277
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C GDD IAIKSG +Q G + PS NI++R+ +++
Sbjct: 278 CTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKN 316
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 33/261 (12%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+ A +FG GDGV +T+A Q+A+ A + GK + + PG + + S
Sbjct: 15 VHAATLTANNFGAKGDGVADDTKAIQKALDAAA--GKHD--TVTLKPGTYRIGSIFVKSG 70
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
L L + I++ +PLMP + G E P + ++ DV ITG GT
Sbjct: 71 SRLDLPKGVTLRGIQSLDAYPLMPTRIA---GIEMTWP--AALVNVYKQTDVQITGE-GT 124
Query: 192 INGQGQAWWK-------KYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFWT 238
I+G G WWK KY K L + R L+Q+ SS++ + L S FWT
Sbjct: 125 IDGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRSGFWT 184
Query: 239 LHPYDCKNVTIRNAFISKIQ----------LFDSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
+H +VTI + I + DS D++++ I V DDA+ +K+G D
Sbjct: 185 VHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKAGRDS 244
Query: 289 YGIAYGRPSMNILIRNLVVRS 309
G+ RP+ N+++R+ ++R+
Sbjct: 245 DGLRVNRPTYNVVLRDSLIRT 265
>gi|146295704|ref|YP_001179475.1| glycoside hydrolase family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409280|gb|ABP66284.1| glycoside hydrolase, family 28 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 454
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 51/262 (19%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG DG++ TEA Q+A I + GGG + +P G +L+ P L S++TL+L +
Sbjct: 16 VTDFGAKPDGLSFCTEAIQKA---IDTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 139 DAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I A N E Y+ + GY G SF++ N K++ I G GTI+ G
Sbjct: 73 GAVIKATNNIEDYYQI-------GYYHNEWG-EVTSFLYAMNEKNIAIDGK-GTIDLSGS 123
Query: 198 AWW-----------------KKYRQKLLNNTRGPLVQIMW--SSDILISNITLRDSPFWT 238
++ +++ + N P I + +I +S I++ DSP WT
Sbjct: 124 SFMDFSRAFNQFEELSQLDKEQFEETECNPIYRPNQPIFFYNCENICLSGISIIDSPCWT 183
Query: 239 LHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIK--SGWD 287
+ + K + + N I I L SCE+ +I D + + GDD +AI + WD
Sbjct: 184 VCIHSSKYIKVHNIRIMNNLRVPNSDGIHLC-SCENAIITDSFFTCGDDCVAISGITNWD 242
Query: 288 QYGIAYGRPSMNILIRNLVVRS 309
+P NI++ N ++++
Sbjct: 243 -------KPCENIIVSNCIMQT 257
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 120/291 (41%), Gaps = 77/291 (26%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ D+G VGDGVT +++A Q A+ A + GG + +P G + TAP L S MTL +
Sbjct: 145 FNVKDYGAVGDGVTKDSKAIQDAIDACTP-----GGVVVIPAGTYYTAPLKLKSDMTLNI 199
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF---IHGQNLKDVVITGHNGTIN 193
A ILA + + ++ G F S+ I + K++ I G GTI+
Sbjct: 200 EKGATILASRDVSDYKIID--------SRWEGTSFKSYMSIITAIDAKNLNIIGE-GTID 250
Query: 194 GQ---------GQA--------------------------------------WWK--KYR 204
G G+ WW K
Sbjct: 251 GNAGPIKEAAAGETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKAT 310
Query: 205 QKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---- 260
R +Q++ +LI + +++SP WT+HP KN+TI + +
Sbjct: 311 DPTKQTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSP 370
Query: 261 -------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
DS +++++ + VGDD IAIKSG D G G PS NI IRN
Sbjct: 371 NTDGLDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRN 421
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+ +TDFG V D L EA +A+ S GGG + VP G + T P L S +
Sbjct: 49 TYRITDFGAKVDDESNLCHEAINQAILQCSL---AGGGTVLVPKGTFYTGPITLKSDVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + R + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNARPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWW-----KKY---------------RQKLLNNTRGP---------------LVQ 217
QG AWW KY R ++ T P L+
Sbjct: 161 QGSIDAWWPMCGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++++
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKN 318
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 134/329 (40%), Gaps = 59/329 (17%)
Query: 32 TLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASR-----PIPRLRPAAFNLTDFGGVG 86
TL + A S+ R FS W A P +F++ DFG
Sbjct: 38 TLAGLAGSATLTSLSACSRQTAPAAFSIDAWRKAEAIRAQVVAPVFPERSFDVRDFGAKA 97
Query: 87 DGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIE 146
DG NT+AF A+ A G +L+ P +L S++ L +A+ A IL I
Sbjct: 98 DGKHNNTQAFAAAIKACHDAGGGKVVVAGG---DYLSGPIHLLSNINLHVAEGARILFIT 154
Query: 147 NEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ--AWW---- 200
+ + +P + + G E G + I+ ++ ITG G ++GQ WW
Sbjct: 155 DPSAY--LPAVFTRWEGMELMG--YSPLIYAYGQTNIAITG-KGVLDGQANRTTWWPWKG 209
Query: 201 -----------------KKYRQKLLNNT-----------------RGPLVQIMWSSDILI 226
R KL+ + R P +Q ++LI
Sbjct: 210 GAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRPPFIQPYACKNVLI 269
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFD-----SCEDMVIEDCYISVGDDAI 280
+T+ ++PFW L+P C+NVT+ IS D SC+++VI++C GDD I
Sbjct: 270 EGVTITNAPFWLLNPVLCENVTVDGVNCISHGPNSDGCDPESCKNVVIKNCLFDTGDDCI 329
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
AIKSG + G P+ NI+I + +R
Sbjct: 330 AIKSGRNADGRRLNTPTENIVISHCKMRE 358
>gi|237710404|ref|ZP_04540885.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229455866|gb|EEO61587.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 437
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 49 QRNAVVGGFSFLRWGVASRPI-PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLG 107
++N G W + ++ + P ++L+D+G + + T+ Q+ I +
Sbjct: 25 KQNVFPDGTPISEWFLQTKVVHPDSLGKKYDLSDYGIESNPHIVQTQKIQKI---IDEAA 81
Query: 108 KKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHH 167
GGG + +P G + + L+L+ A +L EN +PL+ Y +
Sbjct: 82 ANGGGVIYIPEGIYKSGSLFFKQGTHLYLSKGATLLGSENIMDFPLLMTRIEGEYCK--- 138
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--------LNNTRGPLVQIM 219
FG+ I+ L I+G GTI+G G +WK +R + + R L+ I
Sbjct: 139 --YFGASINADGLDTFTISG-KGTIDGNGTPYWKAFRLRREWNPQCTNKDEMRPRLLYIA 195
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVT------------IRNAFISKIQLFDSCEDMV 267
++ ++++TL++SPFWT H Y C V I++A I + D C +
Sbjct: 196 HCRNVQVADVTLQNSPFWTSHYYRCDKVKLLNLRIFSPIKPIKSASADGIDM-DVCTNFH 254
Query: 268 IEDCYISVGDDAIAIKSGWDQYG--IAYGRPSMNILIRNL 305
I+ C +V DDAI K G Y Y P+ NILI +
Sbjct: 255 IKGCRFTVNDDAICFKGGKGPYADQDTYNGPNKNILIEDC 294
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 231 LRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAI 282
+DSPFW +HP C NV IRN + DS ++ IEDCYIS GDD IAI
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVRS 309
KSGWD+YG+AYGRPS +I IR + S
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSS 99
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
NI L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 NIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|393788323|ref|ZP_10376453.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
gi|392655996|gb|EIY49637.1| hypothetical protein HMPREF1068_02733 [Bacteroides nordii
CL02T12C05]
Length = 457
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 32/249 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
FN+ +G G+G L++ A Q+A+ A K GGG + VP G +L+A L ++TL
Sbjct: 24 TFNVKKYGARGNGKKLDSPAIQKAIDACHK---AGGGTVLVPAGTYLSATIVLKDNVTLH 80
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNGTING 194
L DA IL + K + + P E G G + + + K+V + G G+I+G
Sbjct: 81 LEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALLVAVDAKNVTLEGE-GSIDG 133
Query: 195 QGQAWWKKYRQKLLNNTRGP-------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
QG A K+ K+ G L++++ + + ++TL+ + WT H + C+NV
Sbjct: 134 QGSA-LKERHIKVDTRPEGKRWGLRPFLLRLVRCEGVTVRDVTLKYAGAWTSHYFQCRNV 192
Query: 248 TIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
I N I + D C+ + I +C I GDDA+ K+ + G +I
Sbjct: 193 KIDNVTIRSFGVAHNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMGCD------DI 246
Query: 301 LIRNLVVRS 309
++ N+ ++S
Sbjct: 247 VVENMKLKS 255
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 56/267 (20%)
Query: 88 GVTLNTEAFQRAVYAISKL----GKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL 143
G N A Q AI+KL KKGGG + +P G W T + S + L L + A +
Sbjct: 54 GAKQNASAAQNQ-KAINKLIALVSKKGGGTIVIPKGTWRTGAIEMKSFVELNLEEGAVLQ 112
Query: 144 AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ--AWW- 200
K +PL+ G ++ P I+ + D+ ITG GTI+G G WW
Sbjct: 113 FAFEPKLYPLVRTAWE-GLACWNYSP----CIYAYKVSDIAITGK-GTIDGGGNNDTWWQ 166
Query: 201 --------------KKYR--------QKLLNN--------------TRGPLVQIMWSSDI 224
K+++ QK+ N R LV + S I
Sbjct: 167 WNGNPYFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQGLRPQLVNFVRSERI 226
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDD 278
LI ++ + +SPFW +HP CK++T+ + ++CE+++I++C GDD
Sbjct: 227 LIKDVKMINSPFWVMHPLLCKDITVDGVTVWNEGPNGDGCDPEACENVLIQNCIFHTGDD 286
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNL 305
IAIKSG + G + +PS NI+IRN
Sbjct: 287 CIAIKSGRNNDGRLWNKPSKNIIIRNC 313
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ K+GGG + +P G+W +A L S++ L LA AEI + E Y +P + +
Sbjct: 80 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY---LPAVFTR 136
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 137 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMP 193
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 194 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 253
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 254 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIR 307
>gi|222529558|ref|YP_002573440.1| glycoside hydrolase family protein [Caldicellulosiruptor bescii DSM
6725]
gi|222456405|gb|ACM60667.1| glycoside hydrolase family 28 [Caldicellulosiruptor bescii DSM
6725]
Length = 443
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 51/262 (19%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG GDGV+ TE Q+A I + GGG + +P G +L+ P L S++TL+L +
Sbjct: 5 VTDFGAKGDGVSFCTEVIQKA---IDTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 61
Query: 139 DAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I A N E Y+ + GY G SF++ N K++ + G GTI+ G
Sbjct: 62 GAVIKATNNIEDYYQI-------GYYHNEWG-EVTSFLYAMNEKNIAVDGK-GTIDLSGS 112
Query: 198 AWW-----------------KKYRQKLLNNTRGPLVQIMW--SSDILISNITLRDSPFWT 238
++ ++ + P I + +I +S I++ DSP WT
Sbjct: 113 SFMDFSRAFNQFEELSQLDKDQFEETECKPIYRPNQPIFFYNCENISLSGISIIDSPCWT 172
Query: 239 LHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIK--SGWD 287
+ + K + + N I I L SCE+++I D + + GDD +AI + WD
Sbjct: 173 VCIHSSKYIKVHNIRIMNNLRVPNSDGIHLC-SCENVIISDSFFTCGDDCVAISGITNWD 231
Query: 288 QYGIAYGRPSMNILIRNLVVRS 309
+P NI++ N ++++
Sbjct: 232 -------KPCENIIVSNCIMQT 246
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 63/283 (22%)
Query: 77 FNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +TDFG V N +A RA+ S+ +GGG++ VP G WLT L S + L
Sbjct: 45 YRITDFGASVRATAARNQKAINRAIATCSR---QGGGRVVVPRGEWLTGAIRLQSRVNLV 101
Query: 136 LADDAEILAIENEKYWPLMPP----LPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ + A + + +PL+ L + Y I+ DV +TG GT
Sbjct: 102 VEEGATLEFAFDPALYPLVKTSWEGLECWNYS---------PCIYAYQATDVGLTGR-GT 151
Query: 192 INGQG--QAWW-----KKY---------------RQKLLN-----------------NTR 212
++G G WW KY R +LL R
Sbjct: 152 VDGNGSRDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLR 211
Query: 213 GPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF------DSCEDM 266
LV IL+ +TL +SPFW +HP N+T+ ++ ++C ++
Sbjct: 212 PQLVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTNDGPNGDGCDPEACSNV 271
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+I++C GDD IAIKSG + G + RPS NI+IR+ ++
Sbjct: 272 LIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKD 314
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ K+GGG + +P G+W +A L S++ L LA AEI + E Y +P + +
Sbjct: 48 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY---LPAVFTR 104
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 105 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMP 161
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 162 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 221
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 222 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIR 275
>gi|189465212|ref|ZP_03013997.1| hypothetical protein BACINT_01557 [Bacteroides intestinalis DSM
17393]
gi|189437486|gb|EDV06471.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 487
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++T G GDGVT NT Q+AV + KKGGG + +P G +L P L S+
Sbjct: 20 LIAGTIDVTKRGAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ L L +L + P G + G F GQ K++ ITG GT
Sbjct: 77 VNLHLDFGTLLLGSTRLSDYDHAFPFKD-GTMNQSSGLLFA---RGQ--KNISITGF-GT 129
Query: 192 INGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I+GQG ++ + P ++ + DI+++++TLR+S +W H C++VTIR
Sbjct: 130 IDGQGGDKAFQFGNDADGGPKRPKIIYFVECRDIVVTDVTLRNSAYWVQHYEKCEDVTIR 189
Query: 251 NAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
+++F C ++ I DCYI V DDAI KS ++ N
Sbjct: 190 G-----LKVFSHCNYNNDGLDIDAKNATIFDCYIDVEDDAICFKSDHPEF-------CEN 237
Query: 300 ILIRNLVVRS 309
I + N V S
Sbjct: 238 ITVTNCVTAS 247
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 51/315 (16%)
Query: 25 AFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAF--NLTDF 82
AFL+ L +LW A ++ + + W + + P F ++ D
Sbjct: 5 AFLAC---LLPILWAACSSTATTRKESG--------EWAKVPEILKNIVPPTFPDSIYDV 53
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT-APFNLTSHMTLFLADDAE 141
G + ++ + AI++ GGG + +P G + + L S++ L +AD A
Sbjct: 54 TAYGAKSDTSFDSRPAILEAINQCNTNGGGTVLIPAGNYFSKGAILLKSNVNLHIADGAR 113
Query: 142 I-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW 200
+ + Y P++ L + G E + FI+ +V +TG GTI+G G +
Sbjct: 114 LEFSTVASDYLPMV--LTKW-EGTECF--NYSPFIYAYQCTNVALTGK-GTIDGNGAVTF 167
Query: 201 K-----------KYRQKLLNNT-------------RGPLVQIMWSSDILISNITLRDSPF 236
+ RQ +++ R ++Q ++L+ ++ + DSPF
Sbjct: 168 NGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYDSPF 227
Query: 237 WTLHPYDCKNVTIRNAFI-SKIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYG 290
W +HP C NVT+RN +I S D C+ +++IE+ +VGDD IAIKSG DQ G
Sbjct: 228 WIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSGRDQDG 287
Query: 291 IAYGRPSMNILIRNL 305
G+ + N++IRN
Sbjct: 288 WRIGQATENVIIRNC 302
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 51/315 (16%)
Query: 25 AFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAF--NLTDF 82
AFL+ L +LW A ++ + + W + + P F ++ D
Sbjct: 15 AFLAC---LLPILWAACSSTATTRKESG--------EWAKVPEILKNIVPPTFPDSIYDV 63
Query: 83 GGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT-APFNLTSHMTLFLADDAE 141
G + ++ + AI++ GGG + +P G + + L S++ L +AD A
Sbjct: 64 TAYGAKSDTSFDSRPAILEAINQCNTNGGGTVLIPAGNYFSKGTILLKSNVNLHVADGAR 123
Query: 142 I-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW 200
+ + Y P++ L + G E + FI+ +V +TG GTI+G G +
Sbjct: 124 LEFSTVASDYLPMV--LTKW-EGTECF--NYSPFIYAYQCTNVALTGK-GTIDGNGAVTF 177
Query: 201 K-----------KYRQKLLNNT-------------RGPLVQIMWSSDILISNITLRDSPF 236
+ RQ +++ R ++Q ++L+ ++ + DSPF
Sbjct: 178 NGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQIYDSPF 237
Query: 237 WTLHPYDCKNVTIRNAFI-SKIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGWDQYG 290
W +HP C NVT+RN +I S D C+ +++IE+ +VGDD IAIKSG DQ G
Sbjct: 238 WIIHPVFCDNVTVRNVYIDSNNYNNDGCDPESSTNVLIENMDFNVGDDGIAIKSGRDQDG 297
Query: 291 IAYGRPSMNILIRNL 305
G+ + N++IRN
Sbjct: 298 WRIGQATENVIIRNC 312
>gi|302871635|ref|YP_003840271.1| glycoside hydrolase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574494|gb|ADL42285.1| glycoside hydrolase family 28 [Caldicellulosiruptor obsidiansis
OB47]
Length = 454
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 51/262 (19%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG DGV+ +TEA Q+A I + GGG + +P G +L+ P L S++TL+L +
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKA---IDICFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 139 DAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I A N E Y+ + GY G SF++ N KD+ + G GTI+ G
Sbjct: 73 GAVIKATNNIEDYYQI-------GYYHNEWG-EVTSFLYAMNEKDIAVEGK-GTIDLSGS 123
Query: 198 AWWKKYR-------------QKLLNNTRGPLVQ------IMWSSDILISNITLRDSPFWT 238
++ R ++ P+ + +I +S +++ DSP WT
Sbjct: 124 SFMDFSRAFNQFEELSQLDKEQFEETECKPICRPNQPIFFYNCENISLSGVSIIDSPCWT 183
Query: 239 LHPYDCKNVTIRNAFISK---------IQLFDSCEDMVIEDCYISVGDDAIAIK--SGWD 287
+ + K + + N I I L SCE++++ D + + GDD +AI + WD
Sbjct: 184 VCIHSSKYIKVHNIRIMNNLRVPNSDGIHLC-SCENVILTDSFFTCGDDCVAISGITNWD 242
Query: 288 QYGIAYGRPSMNILIRNLVVRS 309
+P NI++ N ++++
Sbjct: 243 -------KPCENIIVSNCIMQT 257
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+L+ F N+ D G D T+ R + +SK +GGG + +P G+W +
Sbjct: 112 MPQLKRPVFPDFIVNMKDKGMTEDAPI--TDLVNRTIAEVSK---QGGGTVVIPEGKWKS 166
Query: 124 APFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
A L S++ L LA AEI + E Y +P + + G E GP +FI+ +
Sbjct: 167 ARIVLKSNVNLHLAKGAEIEFSGCAEDY---LPAVFTRHEGVEIMGP--AAFIYANGENN 221
Query: 183 VVITGHNGTING------------------QGQAWWKKYRQKLLNNTRG------PLVQI 218
+ ITG GTI G + W Q++ + G +
Sbjct: 222 IAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIEQRIYDGMEGRTFYRPKTISP 280
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDC 271
+ ++ILI IT+ S W + P C+NV IR ++ ++ +SC++++IE C
Sbjct: 281 INCTNILIEGITMERSTLWNVVPIYCENVIIRGITVNSTKVPSGDGIDIESCKNVLIEYC 340
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 341 TLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 372
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 60/293 (20%)
Query: 63 GVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYA-ISKLGKKGGGQLNVPPGRW 121
G+ RP R A N+TDF + N F++A++A I ++ ++GGG++ VP G W
Sbjct: 60 GMIKRPTFAKREA--NVTDF------LNENGSDFKQALHAAIDQVARQGGGKVVVPKGDW 111
Query: 122 L-TAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQN 179
L + P +L S++ L + A I + E Y P + + G E G + I+
Sbjct: 112 LCSGPIHLQSNINLRIEAGATIRFSTNPEDYKPY---VFTRWEGMELMG--YSPLIYAFE 166
Query: 180 LKDVVITGHNGTINGQGQA--WW------------------KKYRQKLL----------- 208
++ ITG GT++G WW +KY + L
Sbjct: 167 QSNIAITGK-GTLDGSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVS 225
Query: 209 ------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-- 260
N R P +Q ++LI +T+ SPFW ++P CKNVT+ + +
Sbjct: 226 DRVFENNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSD 285
Query: 261 ----DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC +++I +C GDD IAIKSG + G P NI+I + +++
Sbjct: 286 GCDPESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKA 338
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 36/233 (15%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
I+++ K+GGG + +P G+W +A L S++ L LA AEI K + +P + +
Sbjct: 470 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAKDY--LPAVFTRH 527
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKKY 203
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 528 EGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 204 RQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
Q++ + +G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 585 EQRIYDGMKGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST 644
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 645 KVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIR 697
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+N+ DFG D T + + AI ++GGG + VP G + T P L S++ L
Sbjct: 47 VYNIMDFGAKPD--TPDAPCHEAINQAIMACNQEGGGTVLVPEGTFYTGPITLKSNVNLH 104
Query: 136 LADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+++ A + + + + Y+P + + G + + + +G+ ++ +TG G I+G
Sbjct: 105 VSEGAVLKFSTDQDLYFP---AVITRWEGLDCYNAHPLIYAYGET--NIALTGK-GVIDG 158
Query: 195 QG--QAWW-----KKY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW +Y R++L+ + R L+
Sbjct: 159 QGSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPEDGLRPQLIN 218
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ +LI ++TL +SPFW +HP C+++ +R +++F +SC+++
Sbjct: 219 FYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRG-----VKIFNRGPNGDGCDPESCKNV 273
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++RN +++
Sbjct: 274 LIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKN 316
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 36/233 (15%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
I ++ +KGGG + +P G+W + L S++ L LA+ +EI N + + +P + +
Sbjct: 72 TIEEISQKGGGTVIIPKGKWKSGRIVLKSNVNLHLAEGSEIEFPGNAEDY--LPAVFTRH 129
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR--------QKLLNNT-- 211
G E G GSFI+ ++ ITG G I G + R + +LNN
Sbjct: 130 EGIEIMGS--GSFIYANGEDNIAITGK-GVIYGPSLDAEIRQRPNGNTVVEKDILNNAPV 186
Query: 212 ----------RG----PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
RG + + +++LI IT+ S FW + P C+NV IR ++ I
Sbjct: 187 EKRVFDGMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNSI 246
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
+ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 247 GIPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 299
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 58/292 (19%)
Query: 63 GVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYA-ISKLGKKGGGQLNVPPGRW 121
G+ RP R A N+TDF + N F++A++A I ++ ++GGG++ VP G W
Sbjct: 60 GMIKRPTFAKREA--NVTDF------LNENGSDFKQALHAAIDQVARQGGGKVVVPKGDW 111
Query: 122 L-TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
L + P +L S++ L + A I N + P + + G E G + I+
Sbjct: 112 LCSGPIHLQSNINLHIEAGATIRFSTNPDDY--KPYVFTRWEGMELMG--YSPLIYAFEQ 167
Query: 181 KDVVITGHNGTINGQGQA--WW------------------KKYRQKLL------------ 208
++ ITG GT++G WW +KY + L
Sbjct: 168 SNIAITGK-GTLDGSAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVENGTPVSD 226
Query: 209 -----NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--- 260
N R P +Q ++LI +T+ SPFW ++P CKNVT+ + +
Sbjct: 227 RVFENNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSDG 286
Query: 261 ---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC +++I +C GDD IAIKSG + G P NI+I + +++
Sbjct: 287 CDPESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKA 338
>gi|146300860|ref|YP_001195451.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155278|gb|ABQ06132.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 509
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 49/257 (19%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F++ +G VGDG TLNT+A Q+A+ A +K GG++ G +L+ L S + LF
Sbjct: 24 FDIKKYGAVGDGKTLNTKAIQKAIDAANK---SKGGKVLFSKGTFLSGSIVLKSDVELFF 80
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A +L N + +P ++ G R +FI + K++ + G G I+GQG
Sbjct: 81 EEGAILLGSTNPEDYP------------KYDGIR--AFIIASDSKNIAVNGK-GIIDGQG 125
Query: 197 QAWW----------------KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH 240
+ YR+ + RG L+ + I ++ ITL++SP WT
Sbjct: 126 RELALAIDSLHHTGVRIDPKYNYRRMRPEDGRGKLISFVKCDSITMTQITLKNSPGWTQC 185
Query: 241 PYDCKNVTIRNAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
+CKN+ I + I L D CE+ I +C ++ DD I +KS
Sbjct: 186 FRECKNIIIDFMKVESRAYWNNDGIDL-DGCENARITNCNVNAADDGICLKSE------V 238
Query: 293 YGRPSMNILIRNLVVRS 309
G + NI I N +RS
Sbjct: 239 PGLHNNNIYIGNCTIRS 255
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
V +P+ +L N+ DFG VGDG T +T A Q+ + S LG GG++ VP G +LT
Sbjct: 49 VLPKPVVKL-----NVRDFGAVGDGKTKDTLALQQTLDRCSLLG---GGEVFVPAGEYLT 100
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
L S+ L L DA +L + +PL GR G + FI + +++
Sbjct: 101 GALVLRSNTLLRLDGDASLLGSPDVADYPLTQ---VRWEGRWIKG--YIGFISAMDAENI 155
Query: 184 VITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
I G G I G + R N L++ + ++ + + + W++HP
Sbjct: 156 GIVG-KGKIVGNTAIKGRVERATQFRNP--ALLEFVSCRNVRVEDCFTSQNDMWSIHPTY 212
Query: 244 CKNVTIRNAFISK----IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
C+N+T +N + I + DSC+ +VI+ C DD I++KSG + G RP+ +
Sbjct: 213 CENITFKNVTVHSGADGIDV-DSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTED 271
Query: 300 ILIRNLV 306
+ I N
Sbjct: 272 VQISNCT 278
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 35/262 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
++ + + DFGG+GDG T+NTEA Q+ AI K + GGG + PG +L+ + +
Sbjct: 78 IKDTVYFVNDFGGIGDGKTINTEAIQK---AIDKCAENGGGTIAFKPGTYLSGSIFIKKN 134
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ + + IL ++ + + + G E P + I+ N ++V+I G G
Sbjct: 135 IHFKIGKNVTILGSQDINDY---KEIDTRVAGIEMKWP--AALINVSNQENVIIDGE-GL 188
Query: 192 INGQGQAWW--------KKYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFW 237
I+GQG+ +W +Y K L + R + I S +I + ++ ++ + FW
Sbjct: 189 IDGQGKVFWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFW 248
Query: 238 TLHPYDCKNVTIRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSGW 286
T+H + +T+ + I K + DS + ++I++C I DD +K+G
Sbjct: 249 TVHVLYSEKITV-DGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGR 307
Query: 287 DQYGIAYGRPSMNILIRNLVVR 308
D G RP+ ++IRN + R
Sbjct: 308 DWDGQRVNRPTEYVVIRNCIAR 329
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 47/273 (17%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R F +TDFG D AI + G G + VP G W T NL SH+
Sbjct: 51 RAQRFPITDFGASTDD---QAATTAAIAKAIDAAHRAGSGNVIVPQGIWPTGKINLKSHV 107
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L L+ A +L +EK +PP+ + G E + ++ + ++V ++G G +
Sbjct: 108 NLHLSKGATLLF--SEKPEDYLPPVQTSWEGIECFN--YSPLVYAFDCENVGLSGE-GKL 162
Query: 193 NGQG---QAWWKKYRQKL------------------------LNNTRGPLVQIMWSSDIL 225
+ Q W+K+ + + N+ R VQ +L
Sbjct: 163 KAKLDVWQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFNRCRHVL 222
Query: 226 ISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDMVIEDCYISVG 276
I +I++ DSPFWT+HP C++V IR K++ + ++++IEDC G
Sbjct: 223 IEDISIEDSPFWTIHPLLCRDVVIRRV---KVRAHGHNNDGVDPEMSQNVLIEDCVFDQG 279
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DDA+++KSG D P+ N+++RN +++
Sbjct: 280 DDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKN 312
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 35/250 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+L DF V DG T +T Q+A I ++ GGG+L +PPGR+ + NL S L L
Sbjct: 3 LSLGDFHPVADGETPDTRILQQA---IDQIAAAGGGRLTLPPGRYRSGCLNLPSDFELHL 59
Query: 137 ADDAEILA---IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
A ++A + + + W + + H ++ +++ ITG G I
Sbjct: 60 EAGAVLVASRHLADYQQWKAL------SCAEKSH----NVLLYALGQRNLTITGQ-GHIE 108
Query: 194 GQGQAWW------KKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G +AW+ + YR + R ++ + + +I+L +P WT+H C++V
Sbjct: 109 GDAEAWFAAEPDEQGYRVPKADRPR--MIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHV 166
Query: 248 -----TIRNAFI---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
TI NA + DSCE + I + Y S DDAI IK+ + G+ RP+
Sbjct: 167 HIERLTIDNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLR--RPARR 224
Query: 300 ILIRNLVVRS 309
I + N ++RS
Sbjct: 225 IAVSNCLLRS 234
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ K+GGG + +P G+W +A L S++ L LA AEI + E Y +P + +
Sbjct: 470 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY---LPAVFTR 526
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 527 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMP 583
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 584 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 643
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIR 697
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWNTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 25/250 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A ++ DFG + N A Q A+ AI GG L +P G W + P L S+MTL
Sbjct: 84 ALLDIRDFGASTESAD-NARAIQSAIAAI-----PAGGTLRLPAGSWSSGPVFLKSNMTL 137
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYG------YGREHHGPRFGSFIHGQNLKDVVITGH 188
+ + A + + + ++P + G G P F S I+ + +++ ITG
Sbjct: 138 LIEEGAVLADTGSRQGRKVLPARHADGRVLGTWEGVAE--PCFASLINAIDCQNLAITGQ 195
Query: 189 NGTINGQGQ--AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
GTI+G G WW ++ R + + + +S IT+R+SP WT+HP C++
Sbjct: 196 -GTIDGGGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEH 254
Query: 247 V-----TIRNAFISKIQLF---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V TIRN +S ++ D+ + ISVGDD IAIK+G RP+
Sbjct: 255 VLAVGLTIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTR 314
Query: 299 NILIRNLVVR 308
+ IRN +++
Sbjct: 315 RVEIRNCLMQ 324
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ K+GGG + +P G+W +A L S++ L LA AEI + E Y +P + +
Sbjct: 470 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY---LPAVFTR 526
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 527 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMP 583
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 584 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 643
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIR 697
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPIV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|224537469|ref|ZP_03678008.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520907|gb|EEF90012.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
Length = 469
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 127/239 (53%), Gaps = 30/239 (12%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNL 128
P+ +N+ D+G GDGVT + A Q A+ S K GGG + VP GR ++ +PF+L
Sbjct: 22 PKTGGTIYNIMDYGAKGDGVTDDAAAIQAAIDQCS---KSGGGMVLVPAGRTFMCSPFHL 78
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L L ++ +LA +E + L + G G +IHGQ+LK+V ITG
Sbjct: 79 ASFVELHLEPNSCLLANPDEAAYTLSAFRDNRGEGM--------MWIHGQDLKEVSITG- 129
Query: 189 NGTINGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
G I+G G ++ K Y K + + R ++ ++ +I ++T+R+S +WT+H
Sbjct: 130 TGAIDGNGVSFMGKELEDSYELKPVTDFDPRPHVLTLINIEKTVIRDVTIRNSAYWTVHL 189
Query: 242 YDCKNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
C +V+I + ++ +++ D +++ I +C+I GDD I +K+ +++YG
Sbjct: 190 IGCNDVSIDGISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYG 248
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNESDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ K+GGG + +P G+W +A L S++ L LA AEI + E Y +P + +
Sbjct: 470 TIAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY---LPAVFTR 526
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 527 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMP 583
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI IT+ S W + P C+NV IR ++
Sbjct: 584 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS 643
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 697
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ FG D LNTEA AI GGG + VP G +LT L S++ L L
Sbjct: 2 YDILTFGASID--ELNTEA---IQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHL 56
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ K +P++ + H + S I+ QN++++ +TG GT++G G
Sbjct: 57 SAGAVLKFSDDPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTGF-GTLDGNG 110
Query: 197 QAWWKKYRQKLLNNT--RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
+ WW +R + N R L+ I + +I L SP WT++P C N T N I
Sbjct: 111 KKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTI 170
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM-NILIRNL 305
+SC+++ I +C+I VGDD IAIK+G + Y R + NI I N
Sbjct: 171 LNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNC 227
Query: 306 VV 307
+
Sbjct: 228 TM 229
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 26/254 (10%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
N+ FG GDG+ +T A Q A+ + K G++ +P G++L L S TL
Sbjct: 80 VTLNVRRFGAKGDGIHDDTLAIQTAIASCPK-----DGRVYIPEGKYLVTSLFLKSDFTL 134
Query: 135 FLADDAEILA-IENEKYWPLMPPLPSYGYGREHH------GPR--FGSFIHGQNLKDVVI 185
+ +A +L E EK+ L + SY E++ P F S I G ++ +VVI
Sbjct: 135 DIGKNAVLLGHAEREKFGVLPGMIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNVVI 194
Query: 186 TGHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY- 242
TG GT++G WW+ R K++ R +V + +++ +T+++SP W LHPY
Sbjct: 195 TGE-GTLDGCATFDDWWEDDRAKIIA-FRPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYF 252
Query: 243 --DCK--NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
D + ++TI N + S D S + I Y S+GDD IA+KSG G Y
Sbjct: 253 SDDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKV 312
Query: 296 PSMNILIRNLVVRS 309
PS NI +R + +
Sbjct: 313 PSQNIEVRQCCMNN 326
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 103 ISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY 162
I +L + GGG+L G + T L S++ L L A + ++ K +P++ G
Sbjct: 24 IDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVVVSRWE-GV 82
Query: 163 GREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLLNNTRGPLVQIMW 220
RE + S I+ +++ ITG GTI+GQGQ WW +R + L R L+
Sbjct: 83 KRE----VYASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDS 137
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCY 272
I + +++L +SP WT++P C+++T+ N I +SC+++ I +C
Sbjct: 138 CQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCL 197
Query: 273 ISVGDDAIAIKSGWDQ 288
I VGDD IAIKSG ++
Sbjct: 198 IDVGDDCIAIKSGTEE 213
>gi|423226766|ref|ZP_17213231.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627039|gb|EIY21080.1| hypothetical protein HMPREF1062_05417 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 487
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 115/251 (45%), Gaps = 36/251 (14%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++T G GDGVT NT Q+AV + KKGGG + +P G +L P L S+
Sbjct: 20 LIAGTIDVTKRGAKGDGVTDNTIIIQKAV---DECSKKGGGTVLIPSGSYLIRPIELKSN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLP-SYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
+ L L D L + + + P G + G F GQ K++ ITG G
Sbjct: 77 VNLHL--DFGTLLLGSTRLSDYDNAFPFKDGSMNQSSGLLFA---RGQ--KNISITGF-G 128
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
TI+GQG ++ + P ++ + I+++++TLR+S +W H C++VTI
Sbjct: 129 TIDGQGGNKTFQFGNDADGGPKRPKIIYFVECKGIVVTDVTLRNSAYWVQHYEKCEDVTI 188
Query: 250 RNAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
R +++F C ++ I DCYI V DDAI KS ++
Sbjct: 189 RG-----LKVFSHCNYNNDGLDIDAKNATISDCYIDVEDDAICFKSDHPEF-------CE 236
Query: 299 NILIRNLVVRS 309
NI + N V S
Sbjct: 237 NITVTNCVTAS 247
>gi|375148592|ref|YP_005011033.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062638|gb|AEW01630.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 482
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 34/252 (13%)
Query: 50 RNAVVGGFSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKK 109
+ AV+G +FL + + P P ++T +G V DG T+NT A Q+A I + +K
Sbjct: 2 KKAVIG-IAFLISMIWVQAAP---PVIIDITRYGAVADGKTINTAAIQKA---IDECHQK 54
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG++ P G WL+ L +TL DA +L + + + P + G
Sbjct: 55 GGGKVVFPAGSWLSGTIVLKDQVTLQFDKDARLLGSTDINDYQNIDPFT------DGLGV 108
Query: 170 RFG-SFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGP---------LVQIM 219
G + + + K++ I G +G I+GQG K Q++ +TR LV+I+
Sbjct: 109 DVGWALLVAVDAKNIGIEG-DGAIDGQGA---KLKEQQITTDTRPESQRWGRRPFLVRIV 164
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDCY 272
++ + ITL + WT H + K +TI N I + D C+D+ I++C
Sbjct: 165 RCENVTVKGITLNYAAAWTSHYFQSKKITIENVKIVSHGVAHNDGIDIDGCQDVRIKNCD 224
Query: 273 ISVGDDAIAIKS 284
I GDDA+ K+
Sbjct: 225 IVSGDDALCFKT 236
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 30/256 (11%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++ DFG GDG+ +T Q A+ A + + + +P G + L + +
Sbjct: 81 TLDVRDFGAKGDGIQDDTLFIQAAIMACPEKSR-----VLIPAGTYRIVSLFLKDDVNIE 135
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVIT 186
LA+ A + A + +P+ + SY E++ P F I+G N+K VI
Sbjct: 136 LAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIY 195
Query: 187 GHNGTINGQGQA----WWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHP 241
G GTI+G WW + K+++ P ++ + + + IT+R+SP W +HP
Sbjct: 196 GQ-GTIDGNAGDSEGNWW--HEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHP 252
Query: 242 Y--------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
Y D K + +++ + +SC+D+ I Y S+GDD IA+KSG G Y
Sbjct: 253 YFSDHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTY 312
Query: 294 GRPSMNILIRNLVVRS 309
RPS +I IR +R
Sbjct: 313 KRPSKDISIRRCCMRD 328
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDS 262
TR +++IM+S+ I ISN+TL +SP W +HP ++ I+ I + DS
Sbjct: 125 TRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDS 184
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C + IEDCYI GDD IA+KSGWD+YGI G PS +I+IR L S
Sbjct: 185 CSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCIS 231
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 43/274 (15%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL-TAPFNL 128
P + +TDFG VGD ++ + AF + + I K ++ G ++ VPPG +L P ++
Sbjct: 45 PTISKNKLIITDFGAVGDSLSDSKPAFDKVI-QICK--EQNGARIIVPPGVYLLRGPIHM 101
Query: 129 TSHMTLFLADDAE-ILAIENEKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLKDVVIT 186
+M++ + A+ I + E + Y P + L S+ G ++ P FI+ +K+V I
Sbjct: 102 VDNMSIDIQKGAKLIFSNEAKDYLPTV--LTSWEGTFLYNYSP----FIYAYQVKNVAII 155
Query: 187 GHNGTINGQGQA----WWKKYRQ-----KLLNNTRGPL---------------VQIMWSS 222
G GTI+G + W K +Q + +N+ P+ +Q
Sbjct: 156 GE-GTIDGNAKDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFECK 214
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTIR----NAFISKIQLFDS--CEDMVIEDCYISVG 276
+ILI +T+ +SPFW +H +N+T R +AF FD ++++IED +
Sbjct: 215 NILIEGVTITNSPFWCVHFLKSENITARKVKFDAFNKNNDGFDPEYSKNVLIEDIDFNNA 274
Query: 277 DDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSM 310
DD IAIK+G D G G S NI+IRN + +
Sbjct: 275 DDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKGL 308
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 16/196 (8%)
Query: 103 ISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY 162
I +L + GGG+L G + T L S++ L L A + ++ K +P++ G
Sbjct: 24 IDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKEYPVVVSRWE-GV 82
Query: 163 GREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQ--KLLNNTRGPLVQIMW 220
RE + S I+ +++ ITG GTI+GQGQ WW +R + L R L+
Sbjct: 83 KRE----VYASCIYADGAENIAITGF-GTIDGQGQKWWDVFRNHPEQLEYPRPKLISFDS 137
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCY 272
I + +++L +SP WT++P C+++T+ N I +SC+++ I +C
Sbjct: 138 CQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDPESCKNVRISNCL 197
Query: 273 ISVGDDAIAIKSGWDQ 288
I VGDD IAIKSG ++
Sbjct: 198 IDVGDDCIAIKSGTEE 213
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDG+ +T Q AV A K ++ VP G + L ++ +
Sbjct: 92 TLNVRDFGAKGDGIQDDTLFIQSAVMACPK-----DSRVLVPAGTYRIVSLFLKDNVKIE 146
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHG---------PRFGSFIHGQNLKDVVIT 186
L A + A + +P++ + G++ + P F + + G N+++ VI
Sbjct: 147 LEKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFSAVVTGINIENAVIY 206
Query: 187 GHNGTINGQG----QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
G G I G + WW + ++ R +V + ++I +TLR+SP W +HPY
Sbjct: 207 GR-GVIEGNAGFGEENWWHDPK-RMKTAFRPRMVFLERCKHVVIQGLTLRNSPSWNIHPY 264
Query: 243 --------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
D + ++ +++ + +SC D+ I SVGDD IA+KSG G Y
Sbjct: 265 FSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYK 324
Query: 295 RPSMNILIRNLVVRS 309
RPS +I++ +R
Sbjct: 325 RPSEDIVVSRCCMRD 339
>gi|325106412|ref|YP_004276066.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975260|gb|ADY54244.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 440
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ LTDFG + D + TE Q I K GGG + VP G +L+ L+L
Sbjct: 49 YKLTDFGVLNDSTIVQTEIIQSV---IDKAFNAGGGVVIVPKGVFLSGSLFFKPKTHLYL 105
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ + L L + G+ F + ++ + I+G GT+NG G
Sbjct: 106 EEGAVLKGSDDINNFRL---LTTRMEGQTVK--YFAALVNADQVDGFTISGK-GTLNGNG 159
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + R++ ++ R ++ + S+++ IS ITL++SPFWT H Y C+ V
Sbjct: 160 LRYWKSFWLRRQFNPQCTNMDEMRPRVLYVSNSNNVQISGITLKNSPFWTSHFYKCEYVR 219
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I S D+C+++ I++CY+SV DDAIA+K G
Sbjct: 220 LVDLHILAPEHPVKAPSSDAIDLDACKNVHIKNCYLSVNDDAIALKGG 267
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F ++DFG GDG TL++ A QRA+ A S GG + VP G +L + S +TL +
Sbjct: 35 FKVSDFGAKGDGTTLDSPAIQRAIDAASH----SGGTVIVPAGTYLCGSIFVKSGVTLQI 90
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
DA I + +PLMP + G E P + ++ K+ ITG
Sbjct: 91 EKDATIRGSQKITDYPLMPTRVA---GIEMTWP--AALVNVYEQKNAAITGGGTIDGDG- 144
Query: 197 QAWWKKYRQ-------------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLH--- 240
+ +W YR + R LVQI S I +S + L+ S FWT+H
Sbjct: 145 KIFWDSYRTLRSDYDPKGLRWAADYDAKRPRLVQIFNSDHIKLSGLMLKRSGFWTVHICY 204
Query: 241 --PYDCKNVTIRNAFISK------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
+ VTIRN K I + DS + ++++ ISV DDA+ +K+G D G+
Sbjct: 205 SHDIEVDGVTIRNNEDGKGPSTDGIDI-DSSKKILVQHADISVNDDALCLKAGRDSDGLR 263
Query: 293 YGRPSMNILIRNLVVRS 309
RP+ ++++++ VVR+
Sbjct: 264 VNRPTEDVVLKDSVVRA 280
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ FG D LNTEA Q+A+ A + GGG + VP G +LT L S++ L L
Sbjct: 2 YDILTFGASID--ELNTEAIQQAIDAAAS---DGGGTVVVPAGEFLTGALFLKSNVELHL 56
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ K +P++ + H + S I+ QN++++ +TG GT++G G
Sbjct: 57 SAGAVLKFSDDPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTGF-GTLDGNG 110
Query: 197 QAWWKKYRQKLLNNT--RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
+ WW +R + N R L+ I + +I L SP WT++P C N T N I
Sbjct: 111 KKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTI 170
Query: 255 SKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM-NILIRNL 305
+SC+++ I +C+I VGDD IAIK+G + Y R + NI I N
Sbjct: 171 LNPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNC 227
Query: 306 VV 307
+
Sbjct: 228 TM 229
>gi|319953995|ref|YP_004165262.1| glycoside hydrolase family protein [Cellulophaga algicola DSM
14237]
gi|319422655|gb|ADV49764.1| glycoside hydrolase family 28 [Cellulophaga algicola DSM 14237]
Length = 459
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+P +++ +FG GD +T+NT+A Q+ AI K K GGG + + G + + L +
Sbjct: 27 LKPKIYDIKNFGAKGDSITINTKAIQK---AIDKCSKNGGGIVVIKEGVYSSGTILLKDN 83
Query: 132 MTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
+TL + A++L N + Y + + + G R I K++ I+G +G
Sbjct: 84 VTLQIDKSAKLLGSANPQDYQSIDTFVDATGQ------KRGTCLIGAMGAKNIGISG-SG 136
Query: 191 TINGQGQAWWKK---YRQKLL--------NNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+I+G G A+ + ++K L R L++ + S+ I + NI LR++ W
Sbjct: 137 SIDGNGTAFLPENLFIKKKALGISGEDRFGGNRPFLLRFVKSTQITLKNIHLREAAAWAC 196
Query: 240 HPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI 291
H + N+ + N I I L DS D++I++C I+ GDDAI IKS
Sbjct: 197 HFFQSSNILVDNVSIYNHANQNNDGIDL-DSSHDIIIKNCNINSGDDAICIKS------- 248
Query: 292 AYGRPSMNILIRNLVVRS 309
P+ N+ + N ++S
Sbjct: 249 TSPLPTYNVKVSNCTLKS 266
>gi|440286926|ref|YP_007339691.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
gi|440046448|gb|AGB77506.1| endopolygalacturonase [Enterobacteriaceae bacterium strain FGI 57]
Length = 445
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 103 ISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGY 162
I L GGG L +PPG WLT L SH TL L A + A N +P+ L
Sbjct: 26 IDTLAAAGGGTLTIPPGVWLTGTLVLPSHFTLHLEAGACLRASPNVADYPV--DLTQSMA 83
Query: 163 GREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW------KKYRQKLLNNTRGPLV 216
H + ++ +N + + ++G G + G AW+ + YRQ R L+
Sbjct: 84 ELSHM-----ALLYARNQQQITLSG-EGRVEGNAAAWFAPQADAQGYRQPAAQRPR--LL 135
Query: 217 QIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVI 268
+ + + +ITL DSP WT H CK++ I I + DSC+ + I
Sbjct: 136 VLEGCEQVRLCDITLADSPMWTAHLVSCKHIFIHRLTIDNDLALSNTDALDLDSCQFVHI 195
Query: 269 EDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
D Y S DD I +K+ + A +P+ ++++ N ++RS
Sbjct: 196 SDSYFSAADDGICLKT--TRKAPALQQPTRHVVVNNCIIRS 234
>gi|224537538|ref|ZP_03678077.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520851|gb|EEF89956.1| hypothetical protein BACCELL_02417 [Bacteroides cellulosilyticus
DSM 14838]
Length = 496
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 36/251 (14%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++T G GDGVT NT Q+AV SK KGGG + +P G +L P L S+
Sbjct: 29 LIAGTIDVTKRGAKGDGVTDNTIIIQKAVDECSK---KGGGTVLIPSGSYLIRPIELKSN 85
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLP-SYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
+ L L D L + + + P G + G F GQ K++ ITG G
Sbjct: 86 VNLHL--DFGTLLLGSTRLSDYDNAFPFKDGSMNQSSGLLFA---RGQ--KNISITGF-G 137
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
TI+GQG ++ + P ++ + I+++++TLR+S +W H C++VTI
Sbjct: 138 TIDGQGGNKTFQFGNDADGGPKRPKIIYFVECKGIVVTDVTLRNSAYWVQHYEKCEDVTI 197
Query: 250 RNAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
R +++F C ++ I DCYI V DDAI KS ++
Sbjct: 198 RG-----LKVFSHCNYNNDGLDIDAKNATISDCYIDVEDDAICFKSDHPEF-------CE 245
Query: 299 NILIRNLVVRS 309
NI + N V S
Sbjct: 246 NITVTNCVTAS 256
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DF V D +L+T+A QRA+ + ++ G + +P GR+LT L S MTL
Sbjct: 2 ARINIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTL 56
Query: 135 FLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LA DA +L + E Y P + + G + P + ++ ++V + G +GT++
Sbjct: 57 ELAKDAVLLGSQQLEDY----PEIATRVAGIDMVWPT--AMLNINQCRNVTVCG-SGTLD 109
Query: 194 GQGQAWWKK-------------YRQKLLN-----NTRGPLVQIMWSSD-ILISNITLRDS 234
GQG WW K Y ++ L + R P +++ S+ + + + T +DS
Sbjct: 110 GQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDS 169
Query: 235 PFWTLHPYDCKNVTIR-----NAFISKIQ--LFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW LH K V ++ NA + DS + + +E C +S DD I +KSG
Sbjct: 170 GFWNLHVCYSKQVNLQRLNVMNATGTSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 288 QYGIAYGRPSMNILIRNLVV 307
R + +I+IR+ +
Sbjct: 230 AEAQQLARTARDIIIRDCTL 249
>gi|374374693|ref|ZP_09632351.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373231533|gb|EHP51328.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 515
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 51/273 (18%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
+ A +TD+G GDG TLNT A Q+A+ A + KGGG + P GR+++ L +++
Sbjct: 18 QAADIKVTDYGAKGDGTTLNTVAIQKAIDACN---AKGGGHVIFPAGRYVSGTVLLKNNV 74
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNGT 191
TL L DA I+ + + P ++ G G + I ++K+V I G G
Sbjct: 75 TLQLEKDAWIIGSTDVNDYTNPDPF------KDGLGVDVGWALIAAVDVKNVGIVGAGG- 127
Query: 192 INGQGQAWWKKYRQKLLNNTRGP---------LVQIMWSSDILISNITLRDSPFWTLHPY 242
++GQG K RQ +L +TR L++++ +L+ ++L S WT H +
Sbjct: 128 VDGQGSKL--KERQ-ILTDTRPESQRWGRRPFLLRVVRCDGVLVKGVSLNYSAAWTSHYF 184
Query: 243 DCKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS----------- 284
+N+ + I + D C+++ I +C I GDDA+ K+
Sbjct: 185 QSRNLQLEQLKIRSTGVAHNDGIDIDGCQEVRISNCDIVSGDDALCFKTTSSKMKCNNII 244
Query: 285 ------GWDQYGIAYGRPSM----NILIRNLVV 307
+Q GI G SM NI IRN V+
Sbjct: 245 VSDMKLKSNQAGIKMGTESMAGFENISIRNCVI 277
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 58/292 (19%)
Query: 63 GVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVY-AISKLGKKGGGQLNVPPGRW 121
G+ +RP R A N+ DF + ++ F++A++ AIS++ +GGG++ VP G W
Sbjct: 60 GMVTRPSFAKRQA--NVVDF------LAIHNNDFKQALHDAISQIASQGGGKVVVPKGNW 111
Query: 122 LT-APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
L P +L S++ L + A I N + P + + G E G + I+
Sbjct: 112 LCKGPIHLQSNINLHVELGATIQFSTNPDDY--KPYVFTRWEGMELMG--YSPLIYAYEQ 167
Query: 181 KDVVITGHNGTINGQGQA--WW------------------KKYRQKLL------------ 208
++ ITG GT++G WW +KY + L
Sbjct: 168 TNIAITGK-GTLDGCAAKDNWWPWKGKWKASTWGDDPVENQKYTRDTLQEMVERGTPVSE 226
Query: 209 -----NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--- 260
N R P +Q ++LI +T+ SPFW ++P CKNVT+ + +
Sbjct: 227 RVFEKNYLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVNDVYCKSFGPNSDG 286
Query: 261 ---DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC +++I +C GDD IAIKSG + G P NI+I + +++
Sbjct: 287 CDPESCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKA 338
>gi|160886988|ref|ZP_02067991.1| hypothetical protein BACOVA_05002 [Bacteroides ovatus ATCC 8483]
gi|156107399|gb|EDO09144.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 436
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G V D L TE Q + S GGG + +P G +L+ L L
Sbjct: 48 FLITDYGVVNDSTLLQTEQIQAVIDLASD---NGGGVIVIPEGTYLSGALFFKPGTHLHL 104
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + I+ + ++G NG ++G G
Sbjct: 105 EEKAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSG-NGKVDGNG 158
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 159 ERYWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVK 218
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I D+C++++++ CY+SV DDAIA+K G
Sbjct: 219 LLNLHIFSPSFPIKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|393789566|ref|ZP_10377687.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
gi|392651014|gb|EIY44680.1| hypothetical protein HMPREF1068_03967 [Bacteroides nordii
CL02T12C05]
Length = 487
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 34/250 (13%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L ++T G GDGVT NT Q+AV + KGGG + +P G +L P L S+
Sbjct: 20 LFAVTIDITKRGAKGDGVTDNTVVIQKAV---DECSAKGGGTVLIPSGTYLIRPIELKSN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ L L D L + + + P Y G + F GQ K++ +TG GT
Sbjct: 77 VNLHL--DFGALVLGSTRLADYDHAFP-YKEGSMNQSSGL-LFARGQ--KNISLTGF-GT 129
Query: 192 INGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
I+GQG ++ + P ++ ++ I+++++TLR+S +W H C++VTIR
Sbjct: 130 IDGQGGNESFQFGNDADGGPKRPKIIYLVECQGIVVTDLTLRNSAYWVQHYERCEDVTIR 189
Query: 251 NAFISKIQLFDSC-----------EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
+++F C ++ I DCYI V DDAI KS ++ N
Sbjct: 190 G-----LKVFSHCNYNNDGLDIDAKNATISDCYIDVEDDAICFKSDHPEF-------CEN 237
Query: 300 ILIRNLVVRS 309
I + N V S
Sbjct: 238 ITVTNCVTAS 247
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 53/291 (18%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
V + +P+ F ++DFG V G LN++A A+ A + G ++ VP GR+LT
Sbjct: 60 VRNTQLPKFAERDFPISDFGAVPGGKVLNSDAIAAAIAACAAAGGG---RVRVPQGRFLT 116
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+L S++ L L A ++ N ++ +P + + G E G I+ +++
Sbjct: 117 GAIHLKSNVNLHLDKGAVLVFSPNPDHY--LPAVFTRWEGMEMMG--LSPLIYAYGQRNI 172
Query: 184 VITGHNGTING--QGQAWW------------------------KKYRQKLLNNT------ 211
+TG G ++G WW K +Q++L T
Sbjct: 173 AVTGQ-GVLDGGADDNTWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVLAGTDPRTRL 231
Query: 212 -------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---- 260
R +Q ++LI +TL +SPFW LHP C++VT+R
Sbjct: 232 HGQGSFLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRSHGPNNDGC 291
Query: 261 --DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ C+ +VIE C GDD IAIKSG ++ G G+ N+++RN ++
Sbjct: 292 DPECCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKD 342
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 39/260 (15%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
A N+ DF V D +L+T+A QRA+ + ++ G + +P GR+LT L S MTL
Sbjct: 2 ARINIIDFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTL 56
Query: 135 FLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTIN 193
LA DA +L + E Y P + + G + P + ++ ++V + G +GT++
Sbjct: 57 ELAKDAVLLGSQQLEDY----PEIATRVAGIDMVWPT--AMLNINQCRNVTVCG-SGTLD 109
Query: 194 GQGQAWWKK-------------YRQKLLN-----NTRGPLVQIMWSSD-ILISNITLRDS 234
GQG WW K Y ++ L + R P +++ S+ + + + T +DS
Sbjct: 110 GQGAVWWHKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDS 169
Query: 235 PFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIAIKSGWD 287
FW LH K V ++ + DS + + +E C +S DD I +KSG
Sbjct: 170 GFWNLHVCYSKQVNLQRLNVMNATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRG 229
Query: 288 QYGIAYGRPSMNILIRNLVV 307
R + +I+IR+ +
Sbjct: 230 AEAQQLARTARDIIIRDCTL 249
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 69 IPRLRPAAF-----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+P+L+ F N+ D G D T+ R + +SK +GGG + +P G+W +
Sbjct: 112 MPQLKRPVFPDFIVNMKDKGMTEDAPI--TDLVNRTIAEVSK---QGGGTVVIPEGKWKS 166
Query: 124 APFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
A L S++ L LA AE+ + E Y +P + + G E GP +FI+ +
Sbjct: 167 ARIVLKSNVNLHLAKGAELEFSGCAEDY---LPAVFTRHEGVEIMGP--AAFIYANGENN 221
Query: 183 VVITGHNGTING------------------QGQAWWKKYRQKLLNNTRG------PLVQI 218
+ ITG GTI G + W Q++ + G +
Sbjct: 222 IAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPIEQRIYDGMEGRTFYRPKTISP 280
Query: 219 MWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDC 271
+ +++LI IT+ S W + P C+NV IR ++ ++ +SC++++IE C
Sbjct: 281 INCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNSTKVPSGDGIDIESCKNVLIEYC 340
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 341 TLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 372
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|227538562|ref|ZP_03968611.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241481|gb|EEI91496.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 647
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+F +T+FG VGD VTLNT+A QR AI GGG + VP G +L+ +L + +TL
Sbjct: 52 TSFLITNFGAVGDKVTLNTKAIQR---AIDSCATSGGGLVVVPAGNFLSGTIHLKTGVTL 108
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ + +PL + +H + I+ ++ + I+G GTI+G
Sbjct: 109 HVQSGGTLFGSPRASDYPLNTSV--------YHSTNNRALIYAKDANHIGISG-TGTIDG 159
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QG++ + K + TR +++ DI + +I L ++ +WT + C+NV I + +
Sbjct: 160 QGKSSEFQNNGK-EDGTRPKIIEFANCDDITVKDINLTNAAYWTQYYVYCRNVVIDHINV 218
Query: 255 SKIQLFDS------CEDMVIEDCYISVGDDAIAIKS 284
F++ +++ I +C I+ DD I +KS
Sbjct: 219 YSFANFNNDGIDVDSQNVTIRNCTINSQDDGICLKS 254
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 40/274 (14%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG-RWL 122
VA+ IP F +T +G DG T NT A +A+ A GGG + VP G +L
Sbjct: 47 VANTTIPVFPDRRFPITGYGAKNDGKTDNTAAIAKAIDACVA---AGGGHVIVPGGGSFL 103
Query: 123 TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLK 181
T L S++ L L + + + +P + L Y G +H P I+ K
Sbjct: 104 TGAIRLKSNVDLHLEAGSVLKFSGDAAKFPNV--LTRYEGIECVNHSP----MIYAYQEK 157
Query: 182 DVVITGHNGTINGQGQAWWKK-----YRQKLL---------------NNTRGPLVQIMWS 221
++ +TG +GT++ + W K Y + L+ + R V+
Sbjct: 158 NIGLTG-SGTLDAAATSSWNKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYAC 216
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYI 273
++LI ITL++S FW LHP C+NVT+ +SC+ +VI +C +
Sbjct: 217 ENVLIQGITLKNSMFWQLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTL 276
Query: 274 SVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD IAIKSG D G P N+++ N V+
Sbjct: 277 GAHDDNIAIKSGRDADGRRVNVPCQNLVVVNCVM 310
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETLTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|375146501|ref|YP_005008942.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361060547|gb|AEV99538.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 452
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+ D + T+ Q I K GGG + +P G +L+ L+L
Sbjct: 53 YRVTDYNVKNDSSVVQTQKIQAV---IDKAAASGGGVVVIPKGTFLSGSLFFKQGTNLYL 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++ +PL L + G+ F + ++ L I G GTI+G G
Sbjct: 110 ESGARLKGSDDISNFPL---LMTRMEGQTLK--YFAALVNADGLDGFTIAGK-GTIDGNG 163
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + R++ ++ R L+ + S ++ +S +T +SPFWT H Y C+NV
Sbjct: 164 LRYWKAFWLRREFNPNCTNMDEMRPRLLYVSNSKNVQVSGVTCMNSPFWTTHFYKCENVK 223
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ IS + D C++ +I++CY+SV DDA+A+K G
Sbjct: 224 LLGLHISSPKAPVRAPSTDAVDIDGCKNFLIKNCYLSVNDDAVALKGG 271
>gi|322435361|ref|YP_004217573.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321163088|gb|ADW68793.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 465
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 37/249 (14%)
Query: 74 PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG-RWLTAPFNLTSHM 132
P +++ FG +GDG+ ++T A QR AI + GGG++ +P G R+LT L S++
Sbjct: 31 PIDYDVRTFGAIGDGIAVDTAAIQR---AIDTAAQNGGGRILIPGGKRFLTGALVLKSNV 87
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
LADDA +LA P P+ G H G ++ + + I+G G I
Sbjct: 88 NFHLADDAMLLA----------NPDPADYNG--HLG-----LLNSDRARGLKISG-TGMI 129
Query: 193 NGQGQAWWKKYRQKLL----NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+GQ + + QK R + + D+ I++IT SP W +H C+ V
Sbjct: 130 DGQAMQFMTTFSQKDERWEPKKFRPRMFHLQRCMDLEITDITFGHSPEWGMHLLGCERVL 189
Query: 249 IRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
+ I D C D+ I +C I DDAI IK+ DQ +G PS NI
Sbjct: 190 VDGVRIRNFLEVPNCDGIDPDHCRDVEIRNCDIVCADDAIVIKTS-DQ-AEDFG-PSRNI 246
Query: 301 LIRNLVVRS 309
++++ VV S
Sbjct: 247 VVKDCVVTS 255
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 41/272 (15%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG-RWLTAPFNLT 129
R+ N+ G G+G T AF++A K +KGG ++ VP G ++ P +L
Sbjct: 29 RIPEYVINIQKMGAKGNGTTDCLPAFKKA---FKKAVRKGGARIVVPAGVYYIKGPLHLV 85
Query: 130 SHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L + + A + A E E Y P + G +++ P FI+G L DV I G
Sbjct: 86 SNVCLEIQEGATLKFAPEPEYYLPAVK-TSWEGTFLQNYSP----FIYGYQLHDVSIIG- 139
Query: 189 NGTINGQGQ---AWWK------KYRQKLLNNTRGP---------------LVQIMWSSDI 224
GTI+G A W+ + R + +N+ P L+Q+ I
Sbjct: 140 KGTIDGNAMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERI 199
Query: 225 LISNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFDSCE-----DMVIEDCYISVGDD 278
I ++ + +SPFW +H +N +R+ F +K+ D + +++IED + + GDD
Sbjct: 200 TIEDVFITNSPFWCIHLLQSENAILRSIRFDAKLVNNDGIDPEMSRNVLIEDVHFNNGDD 259
Query: 279 AIAIKSGWDQYGIAYGRPSMNILIRNLVVRSM 310
+AIKSG D G PS NI+IRN + +
Sbjct: 260 NVAIKSGRDHDGRGTACPSENIIIRNCHFKGL 291
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 34/252 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
++T FG GDGVT++T A Q A+ A K G + +P G +L P L S MTL+L
Sbjct: 81 LDVTAFGAKGDGVTMDTAAIQAAICACPK-----DGTVYLPKGEYLVTPLFLKSDMTLWL 135
Query: 137 ADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGPR--FGSFIHGQNLKDVVITG 187
A IL + ++P++P + Y G P + S I + +++ I G
Sbjct: 136 DKGAVILGDTDRNHYPVLPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLDIIG 195
Query: 188 HNGTINGQG--QAWWKKYRQKLLNNTRGP----LVQIMWSSDILISNITLRDSPFWTLHP 241
GTI+G WW + K RG + ++ + + N+ +++SP WT+HP
Sbjct: 196 P-GTIDGNAGNSDWWVNAKVK-----RGAWRPFAMYLVRCQKVRVQNVRVQNSPCWTVHP 249
Query: 242 YDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
Y ++ N +I +SC+++++ ISVGDD +AIKSG + +
Sbjct: 250 YYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEH 309
Query: 294 GRPSMNILIRNL 305
+ + NI+IRN
Sbjct: 310 HKVTENIIIRNC 321
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 47/249 (18%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG 161
AI KL GGG L + G + + P L S++ L++ ++A + + + L P+ +
Sbjct: 27 AIKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNAD---FSLYKPVWTRW 83
Query: 162 YGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWW--------------------- 200
G E I +++ I G +G I+G G+ WW
Sbjct: 84 EGVECWA--MHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQ 140
Query: 201 -----KKYRQ-------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
K YR + L R PL+Q + +I + N+TL++SPFW H C + T
Sbjct: 141 LADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCT 200
Query: 249 IRNA-FISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
I FI+ + DSC + I++C VGDD + +KSG + GI RP+ NI
Sbjct: 201 ITGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENI 260
Query: 301 LIRNLVVRS 309
LI + +++
Sbjct: 261 LIDSCTMKN 269
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 39 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 95
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 96 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 150
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 151 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 210
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 211 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 265
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 266 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 308
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---AGGGTVIVPKGTFYTGPVTLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 52/284 (18%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P FN+ D+G G LN +A A+ A + GGG++ +P GR+LT P +L
Sbjct: 59 PSFADTTFNILDYGAQEGGTVLNADAIADAIEACNA---AGGGRVLIPAGRFLTGPIHLK 115
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L + AE+L ++ + +P + + G E + I+ + K++ +TG
Sbjct: 116 SNVNLHLEEGAEVLFTTDKSAY--LPVVHTSYEGMEIM--NYSPLIYAKGQKNIAVTGK- 170
Query: 190 GTINGQG--QAWW-----KKY-------RQKLLNNT------------------------ 211
GT NGQ + WW ++Y +QK +N
Sbjct: 171 GTFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIPALFTMIEDGTPVEERIFGEGHQL 230
Query: 212 RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-SKIQLFDSCED----- 265
R ++ + ++LI +T ++PFW +HP K VT+ + S D C+
Sbjct: 231 RPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTVNSHGPNNDGCDPEYSKY 290
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ I +C + GDD IAIKSG + G PS NI++ N ++
Sbjct: 291 VHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCDMKD 334
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 51/269 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG + NTEA A+ + + GG + +P G WLT + S++ L L +
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAHAIA---GGTVVIPKGEWLTGKIHFKSNVNLHLEE 108
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A +L E+ + + +P + S G E + + I+ +++ ITG G + +
Sbjct: 109 GATLLFSEDPQDY--LPAVLSTWEGMECYN--YSPLIYAYECENIAITG-KGKLKAKMDT 163
Query: 199 W-------------WKKY-----------RQKLLN---NTRGPLVQIMWSSDILISNITL 231
W K+ ++++N N R +Q S IL+ I +
Sbjct: 164 WEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEGIAI 223
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDMVIEDCYISVGDDAI 280
+SPFW +HPY +V IR ++ +F + ++++IE+C GDDAI
Sbjct: 224 ENSPFWVIHPYLSSDVIIR-----EVNVFAHGHNNDGVDPEMSQNVLIENCVFDQGDDAI 278
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
A+K+G +Q P NI+IR+ V++
Sbjct: 279 AVKAGRNQDAWRLNTPVKNIVIRDCSVKN 307
>gi|302803023|ref|XP_002983265.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
gi|300148950|gb|EFJ15607.1| hypothetical protein SELMODRAFT_155743 [Selaginella moellendorffii]
Length = 472
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 120/267 (44%), Gaps = 51/267 (19%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ--LNVPPGRWLTAP 125
PIP RP N+ D+G +G+G TL T + Q A+ A K G + + VPPG +LT
Sbjct: 26 PIPS-RPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGSYLTGT 84
Query: 126 FNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVI 185
L S+MTL + A+IL + + PP Y I + +++V I
Sbjct: 85 LFLRSNMTLHIDHGAKILGSSRQMDY---PPEKDRWY-----------VILAEGVENVGI 130
Query: 186 TGHNGTINGQGQAWWKKYRQK-------------LLNNTRGPLVQIMWSSDILISNITLR 232
TG G +NGQ + +Y K L + R LV + S+ I + NI LR
Sbjct: 131 TG-GGEVNGQSSKFVVRYDPKKNIMTSWNVTGNCLGDECRPRLVGFLRSTKIRVWNIDLR 189
Query: 233 DSPFWTLHPYDCKNVTIRNAFISKIQLFDS----------CEDMVIEDCYISVGDDAIAI 282
+W LH + + I + IS + FD+ + VIE C I GDDAI
Sbjct: 190 QPAYWCLHLVNSNFIHIHD--ISILGDFDTPNNDGIDVDGSNNTVIERCRIDTGDDAICP 247
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVRS 309
K+ YG P +N+ +R+ VR+
Sbjct: 248 KT-------TYG-PLVNLTVRDCWVRT 266
>gi|255645539|gb|ACU23264.1| unknown [Glycine max]
Length = 126
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R ++T+FGGVGDG TLNT+AF+ A+Y + L ++GG L VPPG +LT PFNLTSHM
Sbjct: 39 RTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNLTSHM 98
Query: 133 TLFLADDAEILAIENEKYWP 152
TL+LA A I+A + P
Sbjct: 99 TLYLAAGAVIMATQVNNLTP 118
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
AI + KKGGG + VPPGRW + L S++ L +A+ AEI + + E Y +P + +
Sbjct: 75 AIVDVNKKGGGTVLVPPGRWKSGRIMLKSNVNLHIAEGAEIEFSGDIEDY---LPAVFTR 131
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR---------------- 204
G E G G+FI+ ++ +TG GTI G + R
Sbjct: 132 HEGIELFGA--GAFIYADGENNIAVTGK-GTITGPALDSEVRKRTNTAAVVEIDVPATMP 188
Query: 205 --QKLLNNTRGPLVQ------IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
++L + G Q + +++ I IT+ S W + P C+NV IR ++
Sbjct: 189 LNERLFDGMEGRDFQPPRTIAPINCTNVFIEGITMNRSALWNVVPTYCENVIIRGITVNS 248
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
+++ +S ++++IE C ++ DD +KSG + G+ GRP+ N++IR
Sbjct: 249 LEIPRGDGIDIESSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIR 302
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G V D + TE Q I K GGG + +P G +L+ L+L
Sbjct: 538 YCITDYGVVNDSTIVQTEKIQ---AVIDSAEKNGGGVVIIPKGTFLSGSLFFKPKTHLYL 594
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ + ++ G ++ F + ++ + ++G GTING G
Sbjct: 595 EEKATLKGSDDISDFAVVDTRME-GQSLKY----FAALLNADEVDGFTVSGK-GTINGNG 648
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + R+++ ++ R L+ + S ++ IS + L +SPFWT H Y C+ +
Sbjct: 649 MRYWKSFWLRREVNPKCTNMDELRPRLLYVSNSKNVQISGVRLINSPFWTTHFYKCEQLR 708
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I+ D C +++I++CYISV DD IA+K G
Sbjct: 709 LLNLHITSPTSPVHAPSTDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 123/282 (43%), Gaps = 44/282 (15%)
Query: 60 LRWGVASRPIPRL-RPA----AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQL 114
L W A+ + R RP F++ DFG GDG T N+ A ++ I +GGG +
Sbjct: 33 LPWPAANDIVARTKRPVFPDRTFSVLDFGAKGDGKTDNSAAIKKT---IETANARGGGHV 89
Query: 115 NVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSY-GYGREHHGPRFGS 173
VP G ++T L S++ L L A + + +P + L Y G + P
Sbjct: 90 VVPKGTFVTGAVYLKSNVDLHLDAGAVLKFGSDASKFPNV--LTRYEGIECVNRSP---- 143
Query: 174 FIHGQNLKDVVITGHNGTINGQGQAWWKK-----YRQKLL---------------NNTRG 213
I+ D+ +TG GT++ A W K Y + L+ + R
Sbjct: 144 MIYAYKESDIAVTGR-GTLDAADTASWNKGKDREYLESLVAKGVPPEKRIVPGSGHAMRS 202
Query: 214 PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------SKIQLFD--SCED 265
V+ +LI +TL++ FW LHP C+NVTI S D SC+
Sbjct: 203 TFVEPYACDTVLIQGVTLKNPVFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDH 262
Query: 266 MVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+VI + ++ DD IA+K+G D G G P NI++ N V+
Sbjct: 263 VVIVNSHLGAHDDNIALKAGRDADGRRVGVPCRNIVVANCVM 304
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 127/291 (43%), Gaps = 56/291 (19%)
Query: 65 ASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTA 124
A+RP P F++T FG GDG TLN+ A RA+ A + G ++ VP GR+LT
Sbjct: 35 AARP-PVFPARDFDVTRFGARGDGQTLNSTAIARAIAACAAAGGG---RVVVPAGRFLTG 90
Query: 125 PFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVV 184
+L S++ L L A +L + K +PL+ + + ++ + +++
Sbjct: 91 AVHLRSNVNLHLQAGATLLFSTDPKDYPLV-----FTRWEGIELMNYSPLVYARQQRNIA 145
Query: 185 ITGHNGTINGQGQA--WW---------------------KKYRQKLLNNT---------- 211
ITG GT++GQG A WW +K R L
Sbjct: 146 ITGE-GTLDGQGSARHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRV 204
Query: 212 -------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNA-FISKIQLFDSC 263
R VQ ++LI + LR +PFW +HP C+N+ +R + D C
Sbjct: 205 FGEGSFLRPAFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLGHGPNNDGC 264
Query: 264 -----EDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ +IE C GDD IAI SG ++ G P+ NILIR+ ++
Sbjct: 265 DPESVDGALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKE 315
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ +GGG + +P G+W +A L S++ L LA AEI A E Y +P + +
Sbjct: 145 TIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY---LPAVFTR 201
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 202 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMP 258
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI I + S W + P C+NV IR ++
Sbjct: 259 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS 318
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 372
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 36/238 (15%)
Query: 62 WGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW 121
WGVA ++ FG GDG T +T A Q+A+ + G K GG + + G +
Sbjct: 19 WGVAK---------TCDVRAFGAKGDGTTKDTVAIQKAIDTCA--GYKKGGVVKLSGGIF 67
Query: 122 LTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLK 181
L+ P +L S++TL +A+ A +L + + +P + + R+ P + N +
Sbjct: 68 LSGPISLKSNITLDIAEGATLLGSPDREDYPKVT------FARQ---PTVQPLVGSVNAE 118
Query: 182 DVVITGHNGTINGQGQAWWK-----KYRQKLLNNTRGPLVQIM-WSSDILISNITLRDSP 235
++ ITG GTI+G G WW+ K L N+ P+ + S I + IT++++
Sbjct: 119 NITITG-GGTIDGNGHIWWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAG 177
Query: 236 FWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
FW + PY ++ RN I I F S ++VI+ + SVGDD +AIKSG
Sbjct: 178 FWQIVPYYADDLVFRNLKILAPHSPNTDAIDPF-SSSNIVIDHVFSSVGDDNVAIKSG 234
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 117/293 (39%), Gaps = 80/293 (27%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ D+G DG T+AF++A+ A GGG + VPPGR+ + P L S+MTL +
Sbjct: 31 FNIADYGAKKDGSAPATDAFRQAIQAAKA---AGGGTIYVPPGRYTSGPIELFSNMTLDI 87
Query: 137 ADDAEI------LAIENEKYWPL--MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
A + L +Y + + P+P I G +++V +TG
Sbjct: 88 DAGARVEFPVAELPFTRGRYLGVETLTPMP---------------LIGGTGVENVTVTGR 132
Query: 189 NGTINGQGQAWWKKYRQ------KLLN-----------NTRGP----------------- 214
G +AW K Y KL N + GP
Sbjct: 133 GILTTGDYEAWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASE 192
Query: 215 -------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI------- 254
+ M + ++L+ ++ + +P + +H +N T+RN I
Sbjct: 193 EEYRLAAAELRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQTYPGPH 252
Query: 255 SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
+ + DS + I D YI GDD I +KSG D GI RP+ ++ I N V
Sbjct: 253 ANAIVADSSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTV 305
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 111 GGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYG--YGREHHG 168
GG L VPPGR+ +P L + MTL+L + AE+ A+ + WP++PP G G
Sbjct: 111 GGTLRVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWEGL 170
Query: 169 PR--FGSFIHGQNLKDVVITGHNGTINGQGQ--AWWKKYRQKLLNNTRGPLVQIMWSSDI 224
P F + + + + ITG G ++ G WW ++ R + + +
Sbjct: 171 PEAAFAAPLTAIDCDGLTITGL-GILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQGV 229
Query: 225 LISNITLRDSPFWTLHPY-----DCKNVTIRNAFISKIQLF---DSCEDMVIEDCYISVG 276
+S IT+R+SP WT+HPY C + I+N S +SC D+ + + SVG
Sbjct: 230 QLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVG 289
Query: 277 DDAIAIKSG 285
DD IA+KSG
Sbjct: 290 DDCIAVKSG 298
>gi|237721264|ref|ZP_04551745.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449060|gb|EEO54851.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 436
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 28/229 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+F +TD+G V D L TE Q + S GGG + +P G +L+ L
Sbjct: 47 SFLITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLH 103
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L + A + ++ +P++ G ++ F + I+ + ++G G ++G
Sbjct: 104 LEEKAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGN 157
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G+ +WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 158 GERYWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSV 217
Query: 248 TIRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I D+C++++++ CY+SV DDAIA+K G
Sbjct: 218 KLLNLHIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|198277376|ref|ZP_03209907.1| hypothetical protein BACPLE_03588 [Bacteroides plebeius DSM 17135]
gi|198269874|gb|EDY94144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 428
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 33/253 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +T++G D L TE Q I K + GGG + +P G +L+ L+L
Sbjct: 36 YCITNYGVQNDSTILQTERIQAV---IDKAAQDGGGVICIPKGTFLSGSLFFRPRTHLYL 92
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++ ++ ++ + F + ++ + ++G G ING G
Sbjct: 93 EKGATLKGSDDISHFDVIDTRL-----EGQNLTYFAALVNVIGVDGFTLSGE-GKINGNG 146
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + R+++ L R LV I S ++ +S + L +SPFWT H Y C+NV
Sbjct: 147 LRFWKSFWLRRQVNPQCTNLEELRPRLVYIADSRNVQLSGVRLENSPFWTTHLYRCENVK 206
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG---W-DQYGIAY 293
+ N I S D C++++++ CY+SV DDAIA+K G W DQ +
Sbjct: 207 LLNLSIFAPHSPVKAPSSDAIDIDVCKNVLVKGCYMSVNDDAIALKGGKGPWADQDKVNN 266
Query: 294 GRPSMNILIRNLV 306
G ++NI+I + V
Sbjct: 267 G-SNLNIIIEDCV 278
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L + A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HLEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMRPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++++
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKN 318
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 38/234 (16%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
I+++ +GGG + +P G+W +A L S++ L LA AEI A E Y +P + +
Sbjct: 131 TIAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDY---LPAVFTR 187
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTING------------------QGQAWWKK 202
G E GP +FI+ ++ ITG GTI G + W
Sbjct: 188 HEGVEIMGP--AAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMP 244
Query: 203 YRQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK 256
Q++ + G + + +++LI I + S W + P C+NV IR ++
Sbjct: 245 IEQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS 304
Query: 257 IQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
++ +SC++++IE C ++ GDD +K+G + G+ G+P+ N++IR
Sbjct: 305 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIR 358
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 44/276 (15%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFN 127
+P + N+ G GD ++ N++ F A+ K K GG + VP G + L P +
Sbjct: 36 LPGIPSFQVNVAKLGAKGDSIS-NSKPFFDKAMALCK--KNNGGTIVVPKGIYFLNGPIH 92
Query: 128 LTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSY-GYGREHHGPRFGSFIHGQNLKDVVI 185
S++ L + A+I +N E Y P++ L S+ G ++ P I+ + ++ I
Sbjct: 93 FVSNVNLKIEKGAKIKFSDNPENYLPMV--LTSWEGTMIYNYSP----LIYAYDCTNIAI 146
Query: 186 TGHNGTINGQGQAWWKKYRQKL---------LNNTRGP---------------LVQIMWS 221
+G GTI+G+G WK ++ K +N+ P ++Q
Sbjct: 147 SGE-GTIDGEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKC 205
Query: 222 SDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS------CEDMVIEDCYISV 275
+IL+ NI + +SPFW LH +++T+R + + +D++IE+ +
Sbjct: 206 KNILVENIRIENSPFWCLHLLKSESITVRGISYKSLNYNNDGIDPEYAKDVLIENVTFNN 265
Query: 276 GDDAIAIKSGWDQYGIA-YGRPSMNILIRNLVVRSM 310
GDD IAIK+G D G A PS NI+IRN + +
Sbjct: 266 GDDNIAIKAGRDHEGRANSATPSENIIIRNCNFKGL 301
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 40/314 (12%)
Query: 20 RRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAFNL 79
RR+ + L S LF+ + F W FS+ V SR +P +
Sbjct: 29 RRYTFSLLLSGALLFSCAHPRLDTNNFEWGEIPQQPDFSWTE-NVGSRQLPD-SSTVVSA 86
Query: 80 TDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADD 139
FG V D L+T+A Q+A I GGG + + PG +LT + S + L ++
Sbjct: 87 NSFGAVADSTVLSTDAIQKA---IDSCALSGGGTVTLQPGYYLTGALFVKSGVNLQISKG 143
Query: 140 AEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW 199
++A + +P S G E P I G+ + ++G GT++ +G+ +
Sbjct: 144 VTLIACSDIHCYP---EFRSRIAGIEMVWPAAVINIIGE--EKASVSGE-GTLDCRGKIF 197
Query: 200 WKKY---RQKL------------LNNTRGPLVQIMWSSDILISNITLRDSPFW---TLHP 241
W KY R++ RG LV+ SSD+ +SN TL + FW L+
Sbjct: 198 WDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVE--NSSDVTLSNFTLMRTGFWGCQILYS 255
Query: 242 YDC--------KNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
C N+ R I + DS +++IE+C I DD I +K+G D G+
Sbjct: 256 DHCTVDGLIINNNIGGRGPSTDGIDI-DSSTNILIENCEIDCNDDNICLKAGRDADGLRV 314
Query: 294 GRPSMNILIRNLVV 307
RP+ NI+IRN V
Sbjct: 315 NRPTENIVIRNCTV 328
>gi|294674947|ref|YP_003575563.1| polygalacturonase/beta-xylosidase [Prevotella ruminicola 23]
gi|294474354|gb|ADE83743.1| putative polygalacturonase/beta-xylosidase [Prevotella ruminicola
23]
Length = 936
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+AS I + A FN+ +G D L+T A Q+A+ A S GGG++ VP G +
Sbjct: 8 LASLCIASMHAADFNIKSYGAQNDTTVLSTHALQQAIDACSA---AGGGRVVVPAGIYKI 64
Query: 124 APFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
L SH+ L+L A + E Y P+ S I+ ++D
Sbjct: 65 GTIQLKSHVHLYLEQGATLYGSTRLEDYIPMKSDYLSL-----RTQTTTIQLIYADGVQD 119
Query: 183 VVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
V I G GTI+G+G+A+ KK TR L++ + S DIL+ ITLR+S W H
Sbjct: 120 VSIDGF-GTIDGRGRAF-KKLSWNDEGITRPHLIRFIQSQDILVRGITLRNSGCWMQHYL 177
Query: 243 DCKNVTI-------RNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
C + I RN + + D C ++++ DD I +KS R
Sbjct: 178 ACDRLNIDGIKVFNRNNYNNDALDIDGCHEVIVRGMIADSDDDGITLKS-------TSPR 230
Query: 296 PSMNILIRNLVVRS 309
N+ I + VV S
Sbjct: 231 LCENVRISDCVVSS 244
>gi|423226738|ref|ZP_17213203.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627011|gb|EIY21052.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 469
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 127/239 (53%), Gaps = 30/239 (12%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNL 128
P+ +N+ D+G GDGVT + A Q A+ S K GGG + VP GR ++ +PF+L
Sbjct: 22 PKTGGTIYNIMDYGAKGDGVTDDAAAIQAAIDQCS---KSGGGTVLVPAGRTFMCSPFHL 78
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S + L L ++ +LA +E + L + G G +I+GQ+LK+V ITG
Sbjct: 79 ASFVELHLEPNSCLLANPDEAAYTLSAFRDNRGEGM--------MWIYGQDLKEVSITG- 129
Query: 189 NGTINGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHP 241
G I+G G ++ K Y K + + R ++ ++ +I ++T+R+S +WT+H
Sbjct: 130 TGAIDGNGVSFMGKELEDSYELKPVTDFDPRPHVLTLINIEKTVIRDVTIRNSAYWTVHL 189
Query: 242 YDCKNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYG 290
C +V+I + ++ +++ D +++ I +C+I GDD I +K+ +++YG
Sbjct: 190 IGCNDVSIDGISILNNLKIRNGDGIDVDHSKNVRIANCHIESGDDCICLKNRREFEEYG 248
>gi|312127381|ref|YP_003992255.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311777400|gb|ADQ06886.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 454
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 49/261 (18%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TDFG DGV+ +TEA Q+A I + GGG + +P G +L+ P L S++TL+L +
Sbjct: 16 VTDFGAKPDGVSFSTEAIQKA---IDTCFENGGGVVVIPAGIYLSRPIRLKSNVTLYLEE 72
Query: 139 DAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A I A N E ++ + GY G SF+ N K++ + G GTI+ G
Sbjct: 73 GAVIKATNNIEDFYQI-------GYYHNEWG-EVTSFLSAMNEKNIAVEGK-GTIDLSGS 123
Query: 198 AWW-----------------KKYRQKLLNNTRGPLVQIMW--SSDILISNITLRDSPFWT 238
++ +++ + P I + +I +S I++ DSP WT
Sbjct: 124 SFMDFSRAFNQFEELSQLDKEQFEETECKPIYRPNQPIFFYNCENISLSGISIIDSPCWT 183
Query: 239 LHPYDCKNVTIRNA-FISKIQL-------FDSCEDMVIEDCYISVGDDAIAIK--SGWDQ 288
+ + K + N I+ +++ SCE+++I D + + GDD +AI + WD
Sbjct: 184 VCIHSSKYIKAHNIRIINNLRVPNSDGIHLCSCENVIITDSFFTCGDDCVAISGITNWD- 242
Query: 289 YGIAYGRPSMNILIRNLVVRS 309
+P NI++ N ++++
Sbjct: 243 ------KPCENIIVSNCIMQT 257
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 62/283 (21%)
Query: 76 AFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
F +TDFG D EA +A+ S GGG + VP G + T P L S++
Sbjct: 49 TFLITDFGAKTDDEANPCHEAINQAILQCSL---SGGGTVIVPKGTFYTGPITLKSNVNF 105
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ A + ++ + P + + G + + + +G++ ++ ITG G I+G
Sbjct: 106 HFEEGAVLKFSTDQSLY--FPAVLTRWEGIDCYNAHPLIYAYGES--NIAITGK-GIIDG 160
Query: 195 QG--QAWWK-----KY-------------RQKLL-----------------NNTRGPLVQ 217
QG + WW KY R++LL + R L+
Sbjct: 161 QGSMETWWPMCGAVKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRLMKPEDGMRPQLLN 220
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-----------DSCEDM 266
+ ILI +TL +SPFW +HP C+++ +S + +F +SC+++
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESL-----IVSGVTVFNRGPNGDGCDPESCKNV 275
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE+C GDD IAIKSG ++ G + PS NI++R ++R+
Sbjct: 276 LIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRN 318
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSY 160
I +L +GGG + +P G+W++ L S + L +A DAEI+ E Y +P + +
Sbjct: 48 TIEQLSSQGGGTVIIPAGKWISGRIELKSFVELHIARDAEIVFGGCAEDY---LPAVFTR 104
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGH----------------NG-TINGQGQAWWKKY 203
G E GP G+FI+ N +++ ITG NG ++ + W
Sbjct: 105 HEGVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPV 162
Query: 204 RQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
Q++ + G + + ++LI IT+ S W + P C+NV IR ++
Sbjct: 163 EQRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST 222
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
++ +SC++++IE C ++ GDD +K+G G+ G+ + N++IR+
Sbjct: 223 EVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH 276
>gi|293369347|ref|ZP_06615932.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292635514|gb|EFF54021.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 436
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G V D L TE Q + S GGG + +P G +L+ L L
Sbjct: 48 FLITDYGVVNDSTLLQTEQIQAVIDLASD---NGGGVIVIPEGTYLSGALFFKPGTHLHL 104
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + I+ + ++G G ++G G
Sbjct: 105 EEKAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGNG 158
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 159 ERYWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVK 218
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I D+C++++++ CY+SV DDAIA+K G
Sbjct: 219 LLNLHIFSPSFPIKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 130/301 (43%), Gaps = 75/301 (24%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + F + +G DG+TLNT++ A+ A SK GGG + + G WLT P L
Sbjct: 53 PVFKKDTFYVEKYGAKPDGITLNTKSINAAIDACSK---NGGGVVFLGGGVWLTGPIQLK 109
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRF--GSFIHGQNLKDVVITG 187
S++ L + DA +L +++ + L+ G P S I N+++V ITG
Sbjct: 110 SNVNLHVKRDAILLFTKDKSQYKLVE-------GNWEGKPALVNESPISAFNVENVAITG 162
Query: 188 HNGTINGQGQAW------------WK---------------------------------- 201
G I+G G+ W WK
Sbjct: 163 E-GIIDGSGEVWRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYF 221
Query: 202 KYRQKLLNNT------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
K KL + R L I S IL+ +T ++SP W LHP +++ +RN F+
Sbjct: 222 KAGSKLADYEPMKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVK 281
Query: 256 K---------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I + +SC++++IE+ VGDD I IKSG D+ G P+ ++++RN V
Sbjct: 282 NPWYAQNGDGIDI-ESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNV 340
Query: 307 V 307
V
Sbjct: 341 V 341
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 57/283 (20%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + +TD+ D +L T+A +A I++ +GGG++ +P G + TAP L
Sbjct: 43 PTFPDKNYVITDYYDGKD--SLYTKAINQA---ITECSVQGGGKVIIPKGIYPTAPIRLK 97
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L LAD A +L + + L + + G + + I+ ++ ITG N
Sbjct: 98 SNVNLHLADSA-VLKFTTD--YNLFDTVRTRLEGIDCYN--ISPLIYAYEEVNIAITG-N 151
Query: 190 GTINGQG---------------QAWWKKYRQKLL-------------------NNTRGPL 215
G ++GQ Q K +K L ++ R
Sbjct: 152 GIMDGQADRSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQF 211
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDM 266
+ + +IL+ T+ +PFW +HP +NVTIR K+Q +SC ++
Sbjct: 212 INLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKV---KMQSHGYNNDGCDPESCNNV 268
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IEDC GDD IAIKSG D+ G + PS NI++RN ++
Sbjct: 269 LIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKD 311
>gi|329956837|ref|ZP_08297405.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523594|gb|EGF50686.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 439
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 36/251 (14%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+N+ +G G+G +++ A Q+A+ A K GGG + VP G +L+A L ++TL
Sbjct: 6 TYNVKKYGAKGNGRKMDSPAIQKAIDACHK---AGGGTVIVPAGTYLSATIVLKDNVTLR 62
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNGTING 194
L DA IL + K + + P E G G + + + K+V + G GTI+G
Sbjct: 63 LEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALMVAVDAKNVTLEGE-GTIDG 115
Query: 195 QGQAWWKKYRQKLLNNTRGP---------LVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
QG A ++ + +TR L++ + ++ + +TL+ + WT H + C+
Sbjct: 116 QGSALKARH---IKEDTRPEGQRWGLRPFLLRWVRCENVKVEGVTLKYAGAWTSHYFQCR 172
Query: 246 NVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
NV I N I + D C+ + I +C I GDDA+ K+ + G
Sbjct: 173 NVNINNITIRSFGVAHNDGINIDGCQHVRISNCDIISGDDALCFKTTSSKMGCD------ 226
Query: 299 NILIRNLVVRS 309
+I+I N+ ++S
Sbjct: 227 DIIITNMKLKS 237
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYAFCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|373952797|ref|ZP_09612757.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373889397|gb|EHQ25294.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 415
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
R + +T G D LNT Q I K GGG + +P G +LT
Sbjct: 18 RSQDYVITKLGVGADSTKLNTTVIQSV---IDKANASGGGTIVIPKGVYLTGALFFKPKT 74
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L L + A + +N +PL +PS GR + + ++ ++ + ITG G I
Sbjct: 75 RLRLEEGARLKGSDNIADYPL---IPSRMEGRNLD--YYAALVNAYHVDNFSITGP-GEI 128
Query: 193 NGQGQAWWKKY-----RQKLLNNTRG------PLVQIMW-SSDILISNITLRDSPFWTLH 240
NG G +WK + K LN + P + +W +++ I N+ L +S FWT H
Sbjct: 129 NGNGLRYWKAFWDHRDSLKKLNQSSTNLEVHRPRLLFIWGCNNVTIQNVKLHNSGFWTTH 188
Query: 241 PYDCKNVTIRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
Y NV I N I + D C+ + I +CYISV DDA+ IK G
Sbjct: 189 LYQSNNVLIENCDIRSPFKPVPAPSTDGVDIDVCKKVTIRNCYISVNDDAVCIKGG 244
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 41/264 (15%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRW-LTAPFNLTSHMTLFLA 137
+T FG GDG AF +A + + K GG + VP G + L P + S++ L L
Sbjct: 50 ITSFGAKGDGKKDCKPAFDKA---MKRAAKSGGAHIVVPAGEYKLNGPIHFVSNVCLELQ 106
Query: 138 DDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + A E E Y PL+ G +++ P FI+G L+++ I G GTI+G
Sbjct: 107 EGAVLKFAPEPEYYLPLVKT-SWEGTFLQNYSP----FIYGYQLENISIIGK-GTIDGNA 160
Query: 197 Q---AWWKKYRQK------LLNNTRGP---------------LVQIMWSSDILISNITLR 232
A WK ++K +N+ P L+Q +I + + +
Sbjct: 161 GSTFATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFIT 220
Query: 233 DSPFWTLHPYDCKNVTIRN-AFISKIQLFDSCE-----DMVIEDCYISVGDDAIAIKSGW 286
+SPFW +H +N+ R + +K+ D + +++IE+ + GDD +AIK G
Sbjct: 221 NSPFWCIHLLKSENIICRGLRYDAKLVNNDGIDPEFTRNLLIENIEFNNGDDNVAIKCGR 280
Query: 287 DQYGIAYGRPSMNILIRNLVVRSM 310
D G RPS NI+IRN + +
Sbjct: 281 DNDGWTTARPSENIIIRNCKFKGL 304
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 32/256 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
A +G GDG+TL+T A Q A+ A +K KG + PG + T + S TL
Sbjct: 29 AIRANAYGAKGDGITLDTRAIQAALDAAAK---KGPATVTFAPGTYRTGALFVKSGTTLR 85
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ + A+ +PL+ + G + H P + I+ DV ITG +GT++G
Sbjct: 86 IGAGVTLRAVHGLANYPLIKTRVA---GIDMHWP--AAVINVYRQHDVHITG-SGTVDGN 139
Query: 196 GQAWW-------KKYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHP- 241
G+ WW K+Y + L ++ R L++ S + ++ + L SPFWT+H
Sbjct: 140 GKYWWDGYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHIC 199
Query: 242 ----YDCKNVTIRNAFISKIQL-----FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIA 292
+TIRN + DS +++E ISV DDA+ +K+G D G+
Sbjct: 200 YSAYVHVDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLR 259
Query: 293 YGRPSMNILIRNLVVR 308
+P ++I+IRN VR
Sbjct: 260 VNKPDVDIVIRNCTVR 275
>gi|427385208|ref|ZP_18881713.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
gi|425727376|gb|EKU90236.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
Length = 469
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 32/251 (12%)
Query: 58 SFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
S L G S P + +N+ D+G GDG T + A Q A+ S K GGG + VP
Sbjct: 12 SILLLGACSAP--KTGGNIYNIMDYGAKGDGKTDDAAAIQTAIEVCS---KSGGGTVLVP 66
Query: 118 PG-RWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
G ++ +PF L S + L L ++ ++A +E + L + G G +I+
Sbjct: 67 AGYTFMCSPFALASFVNLHLEPNSCLIANPDEAAYTLSAFRDNRGEGM--------MWIY 118
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNI 229
G++LK V ITG G I+G G A+ K Y K + + R ++ ++ +I ++
Sbjct: 119 GKDLKQVSITG-TGVIDGNGVAFMGKELEDSYELKPVTDFDPRPHVLTLINIEKTVIRDV 177
Query: 230 TLRDSPFWTLHPYDCKNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIA 281
T+R+S +WT+H C + +I + ++ +++ D +++ I +C+I GDD I
Sbjct: 178 TIRNSAYWTVHLIGCNDASIDGISILNDLKIRNGDGIDVDHSKNVRIANCHIESGDDCIC 237
Query: 282 IKS--GWDQYG 290
+K+ +++YG
Sbjct: 238 LKNRREFEEYG 248
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G + WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNEKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I +C+I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|189466665|ref|ZP_03015450.1| hypothetical protein BACINT_03040 [Bacteroides intestinalis DSM
17393]
gi|189434929|gb|EDV03914.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 457
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+ FN+ +G G+G +++ A Q+A+ A K GGG + VP G +L+A L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAIDACHK---AGGGTVLVPAGTYLSATIVLKDN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNG 190
+TL L DA IL + K + + P E G G + + + K+V + G G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALLVAVDAKNVALEGE-G 129
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-------LVQIMWSSDILISNITLRDSPFWTLHPYD 243
I+GQG A K+ K+ G L++ + + + +TL+ + WT H +
Sbjct: 130 AIDGQGSA-LKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 244 CKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
C+NV I N I + D C+ + I +C I GDDA+ K+ + G
Sbjct: 189 CRNVNIHNVTIRSFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG 242
>gi|299148492|ref|ZP_07041554.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 3_1_23]
gi|336406869|ref|ZP_08587515.1| hypothetical protein HMPREF0127_04828 [Bacteroides sp. 1_1_30]
gi|423294937|ref|ZP_17273064.1| hypothetical protein HMPREF1070_01729 [Bacteroides ovatus
CL03T12C18]
gi|295086741|emb|CBK68264.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513253|gb|EFI37140.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. 3_1_23]
gi|335948542|gb|EGN10246.1| hypothetical protein HMPREF0127_04828 [Bacteroides sp. 1_1_30]
gi|392674517|gb|EIY67963.1| hypothetical protein HMPREF1070_01729 [Bacteroides ovatus
CL03T12C18]
Length = 436
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+F +TD+G V D L TE Q + S GGG + +P G +L+ L
Sbjct: 47 SFLITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLH 103
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L + A + ++ +P++ G ++ F + I+ + ++G G ++G
Sbjct: 104 LEEKAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGN 157
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G+ +WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 158 GERYWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSV 217
Query: 248 TIRNAFI----SKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I S ++ D+C++++++ CY+SV DDAIA+K G
Sbjct: 218 KLLDLHIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|198275291|ref|ZP_03207822.1| hypothetical protein BACPLE_01450 [Bacteroides plebeius DSM 17135]
gi|198271874|gb|EDY96144.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 511
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ G VGDG TLNT++ Q A+ A L KGGGQL P GR+LT L S++TL+L
Sbjct: 24 YNVLQQGAVGDGKTLNTQSLQSAIDA---LHAKGGGQLYFPAGRYLTGSLQLKSNVTLYL 80
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+A +L + +P +H + I+ + +++ I G G I+GQG
Sbjct: 81 EKEAVLLGSTSPYDYPGFSTEKELKVNNDHFDQ---ALIYAEGAENIGIMGE-GCIDGQG 136
Query: 197 QAW-----------------WKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+ + YR++ NTR L+ + + + R W L
Sbjct: 137 RELALTIDSLHHTGELVDKHYNTYRKR--PNTRPKLLFMRNCRKVELRKTNFRSGAAWGL 194
Query: 240 HPYDCKNVTIRNAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
C ++TI + + I + D C+D+ I +C+I+ DD I +KS
Sbjct: 195 SFSLCADLTIDSLHVENRAYWNNDGIDISD-CKDVRISNCFINSADDGICLKS 246
>gi|423288916|ref|ZP_17267767.1| hypothetical protein HMPREF1069_02810 [Bacteroides ovatus
CL02T12C04]
gi|392669006|gb|EIY62498.1| hypothetical protein HMPREF1069_02810 [Bacteroides ovatus
CL02T12C04]
Length = 436
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TD+G V D L TE Q + S GGG + +P G +L+ L L +
Sbjct: 50 ITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLHLEE 106
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + ++ +P++ G ++ F + I+ + ++G G ++G G+
Sbjct: 107 KAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGNGER 160
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V +
Sbjct: 161 YWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVKLL 220
Query: 251 NAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
N I + D+C++++++ CY+SV DDAIA+K G
Sbjct: 221 NLHIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|255691074|ref|ZP_05414749.1| galacturan 1,4-alpha-galacturonidase [Bacteroides finegoldii DSM
17565]
gi|260623423|gb|EEX46294.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 436
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+F +TD+G V D L TE Q + S GGG + +P G +L+ L
Sbjct: 47 SFLITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLH 103
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L + A + ++ +P++ G ++ F + I+ + ++G G ++G
Sbjct: 104 LEEKAILKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGN 157
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G+ +WK + R+++ ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 158 GERYWKSFWLRRRVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSV 217
Query: 248 TIRNAFI----SKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I S ++ D+C++++++ CY+SV DDAIA+K G
Sbjct: 218 KLLDLHIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|4996612|dbj|BAA78557.1| polygalacturonase [Prevotella ruminicola]
Length = 494
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 25/254 (9%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
+AS I + A FN+ +G D L+T A Q+A+ A S GGG++ VP G +
Sbjct: 35 LASLCIASMHAADFNIKSYGAKNDTTVLSTHALQQAIDACSD---AGGGRVVVPAGIYKI 91
Query: 124 APFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
L SH+ L+L A + + E Y P+ S I+ ++D
Sbjct: 92 GTIQLKSHVHLYLEQGATLYGSTRLEDYIPMKSDYLSL-----RTQTTTIQLIYADGVQD 146
Query: 183 VVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
V I G GTI+G+G+A+ KK TR L+ + S DIL+ ITLR+S W H
Sbjct: 147 VSIDGL-GTIDGRGRAF-KKLSWNDEGITRPHLIPFIQSQDILVRGITLRNSGCWMQHYL 204
Query: 243 DCKNVTI-------RNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR 295
C + I RN + + D C ++++ DD I +KS R
Sbjct: 205 ACDRLNIDGIKVFNRNNYNNDALDIDGCHEVIVRGMIADSDDDGITLKS-------TSPR 257
Query: 296 PSMNILIRNLVVRS 309
N+ I + VV S
Sbjct: 258 LCENVRISDCVVSS 271
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 59/263 (22%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + ++ ++GG GDG+T+NT+AF +A ISKL K GGG LNVP G +LT +L
Sbjct: 38 LPSIPANHVSILEYGGNGDGLTMNTQAFAKA---ISKLNKMGGGHLNVPAGIYLTGLISL 94
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
++ L L +A I+ E++ + G++ R I+ K++ ITG
Sbjct: 95 KDNIDLHLEKNAIIVLSEDKNDHFKIDKTT----GKKE--SRATPAINASKRKNISITGE 148
Query: 189 NGTINGQGQAWWK----------------------------------KYRQKLLNN---- 210
GTI+G G+ WW+ K++ + N
Sbjct: 149 -GTIDGNGE-WWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENMDEQ 206
Query: 211 --TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR--------NAFISKIQLF 260
R +++ ++L+ +TL +SP + + P CKNV I NA
Sbjct: 207 EKNRTHMIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDAIDI 266
Query: 261 DSCEDMVIEDCYISVGDDAIAIK 283
SC+D++I + I GDD I +K
Sbjct: 267 SSCKDVLIVNNVIDAGDDGICMK 289
>gi|423224357|ref|ZP_17210825.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392636018|gb|EIY29903.1| hypothetical protein HMPREF1062_03011 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 457
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+ FN+ +G G+G +++ A Q+A+ A K GGG + VP G +L+A L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAIDACHK---AGGGTVLVPAGTYLSATIVLKDN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNG 190
+TL L DA IL + K + + P E G G + + + K+V + G G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALLVAVDAKNVALEGE-G 129
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-------LVQIMWSSDILISNITLRDSPFWTLHPYD 243
I+GQG A K+ K+ G L++ + + + +TL+ + WT H +
Sbjct: 130 AIDGQGSA-LKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 244 CKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
C+NV I N I + D C+ + I +C I GDDA+ K+ + G
Sbjct: 189 CRNVNIHNVTIRSFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG 242
>gi|399033014|ref|ZP_10732097.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068625|gb|EJL60035.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 442
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 30/249 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TDFG D + T A Q+ I K K GGG + +P G +L+ L++
Sbjct: 53 YTITDFGVRKDSTKIQTIAIQKV---IDKAAKNGGGVIIIPKGVFLSGALFFKPKTRLYV 109
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++ + ++ +P+M G ++ F + ++ + + I+G GTING G
Sbjct: 110 SEGGTLKGSDDIANYPIMASRME-GQNLDY----FPALVNAYGVDNFSISGK-GTINGNG 163
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+++ + R+K+ L +R LV + S+++ ++ L +S FWT H Y C NV
Sbjct: 164 YKYYEAFWARRKINPKCTNLEVSRPRLVFVWNSNNVQFQDVKLINSGFWTNHFYKCNNVK 223
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGR-- 295
+ + +I L D C +++++ C++SV DDAIA+K G Y
Sbjct: 224 LLDLYIFSPHLEVKAPSTDAIDLDICSNVLVKGCFLSVNDDAIALKGGKGPYADQDKNNG 283
Query: 296 PSMNILIRN 304
P+ NI+I +
Sbjct: 284 PNSNIIIED 292
>gi|224540434|ref|ZP_03680973.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517948|gb|EEF87053.1| hypothetical protein BACCELL_05347 [Bacteroides cellulosilyticus
DSM 14838]
Length = 457
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+ FN+ +G G+G +++ A Q+A+ A K GGG + VP G +L+A L +
Sbjct: 20 LQAETFNVKKYGARGNGKKMDSPAIQKAIDACHK---AGGGTVLVPAGTYLSATIVLKDN 76
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG-SFIHGQNLKDVVITGHNG 190
+TL L DA IL + K + + P E G G + + + K+V + G G
Sbjct: 77 VTLHLEKDALILGTTDYKAYDNLDPFT------EGLGIDVGWALLVAVDAKNVALEGE-G 129
Query: 191 TINGQGQAWWKKYRQKLLNNTRGP-------LVQIMWSSDILISNITLRDSPFWTLHPYD 243
I+GQG A K+ K+ G L++ + + + +TL+ + WT H +
Sbjct: 130 AIDGQGSA-LKERHIKVDTRPEGQRWGLRPFLLRWVRCEGVRVEGVTLKYAGAWTSHYFQ 188
Query: 244 CKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
C+NV I N I + D C+ + I +C I GDDA+ K+ + G
Sbjct: 189 CRNVNIHNVTIRSFGVAHNDGINIDGCQHVRISNCDIVSGDDALCFKTTASKMG 242
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +T +G NT A +A+ A ++ GGG++ VP G W T P +L S++ L+L
Sbjct: 50 FVITKYGASHADKKKNTRALAKAIEACNR---AGGGRVVVPAGEWFTGPVHLKSNVNLYL 106
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ + +P + + G E + + ++ ++V ITG G +
Sbjct: 107 EEGAVLRFSDDPADY--LPAVMTSWEGLECYN--YSPLVYAFECENVAITG-KGVLAPDM 161
Query: 197 QAW--WKKYRQKLL-------------------------NNTRGPLVQIMWSSDILISNI 229
W W K Q L N+ R L+ +L+
Sbjct: 162 DTWKIWFKRPQAHLHALAQLYSMASTDVPVELRQMARGENHLRPHLIHFNRCKHVLLDGF 221
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL------FDSCEDMVIEDCYISVGDDAIAIK 283
+R SPFWT+H Y C + +RN + F+ + ++E C GDDA+ IK
Sbjct: 222 KIRQSPFWTIHLYMCNSGVVRNLDVQAHGHNNDGIDFEMSRNFLVEHCTFDQGDDAVVIK 281
Query: 284 SGWDQYGIAYGRPSMNILIRNLVVRS 309
SG +Q P NI++R+ +R
Sbjct: 282 SGRNQDAWRLNTPCENIVVRHCAIRK 307
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 44/249 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + F++ DFG + + T NT Q+A+ A K GGG + +PPG +L P
Sbjct: 31 LPHISGKKFSIKDFGAIANNSTDNTGVIQQAIDAADK---AGGGTVIIPPGIYLCGPLQF 87
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGS-FIHGQNLKDVVITG 187
S + F D +L + +P G + G+ FI G L DV ITG
Sbjct: 88 KSSLN-FRIDSGAVLRLLPMDRYP--------------GGTKSGTDFISGSKLHDVAITG 132
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFW--TLHPYDCK 245
+GTI+GQG WW Y+ K + R ++ + +LI +TL ++P + +
Sbjct: 133 -SGTIDGQGAPWWPAYKDKGVKRPR--MIALQNCERLLIRGVTLMNAPMFHIAISGKATN 189
Query: 246 NVTIRNAFI---------SKIQLFDSCE----DMVIEDCYISVGDDAIAIKSGWD----- 287
NVT+ + + D+C+ ++I+DC IS GDD G
Sbjct: 190 NVTVDKVTVRAPASDDPLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGGTSNVHIQ 249
Query: 288 --QYGIAYG 294
+YG +G
Sbjct: 250 NCKYGYGHG 258
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 34/263 (12%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
++ A DFG DG T++T+A Q+A+ A +K KGGG++ PG++LT + S
Sbjct: 47 KVGKAVVYANDFGAREDGKTISTKAIQQAIDACAK---KGGGKVQFRPGKYLTGSVFIKS 103
Query: 131 HMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+ L + + E+L ++ E Y P + + G E P I+GQ + I+G
Sbjct: 104 GVFLHVDEGVELLGSQSLEDY----PQINTRVAGIEMIWPAALVNINGQ--QKAGISGK- 156
Query: 190 GTINGQGQ----AWWK---KYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPF 236
G INGQG+ A+WK +Y +K L + R V + S DI+I ++TL+ + F
Sbjct: 157 GIINGQGKPFWDAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGF 216
Query: 237 WTLHPYDCKNVTIRNAFISKIQL----------FDSCEDMVIEDCYISVGDDAIAIKSGW 286
WT+H VT+ I DS + + I++ I DD IKSG
Sbjct: 217 WTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGR 276
Query: 287 DQYGIAYGRPSMNILIRNLVVRS 309
D G+ RP+ +LI + + R
Sbjct: 277 DWDGLRVNRPTEYVLITDCISRK 299
>gi|302755730|ref|XP_002961289.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
gi|300172228|gb|EFJ38828.1| hypothetical protein SELMODRAFT_437695 [Selaginella moellendorffii]
Length = 474
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 51/272 (18%)
Query: 64 VASRPIPR-LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQ--LNVPPGR 120
++S +P RP N+ D+G +G+G TL T + Q A+ A K G + + VPPG
Sbjct: 22 ISSSGVPNPSRPVQCNVRDYGALGNGSTLETSSIQSAINACHSRSNKLGSKSVVWVPPGS 81
Query: 121 WLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNL 180
+LT L S+MTL + A+IL + + PP Y I + +
Sbjct: 82 YLTGTLFLRSNMTLHIDRGAKILGSSRQMDY---PPEKDRWY-----------VILAEGV 127
Query: 181 KDVVITGHNGTINGQGQAWWKKYRQK-------------LLNNTRGPLVQIMWSSDILIS 227
++V ITG G +NGQ + +Y K L + R LV + S+ I +
Sbjct: 128 ENVGITG-GGEVNGQSSKFVVRYDPKKNIMTSWNVTGNCLGDECRPRLVGFLRSTKIRVW 186
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS----------CEDMVIEDCYISVGD 277
NI LR +W LH + + I + IS + FD+ + VIE C I GD
Sbjct: 187 NIDLRQPAYWCLHLVNSNFIHIHD--ISILGDFDTPNNDGIDIDGSNNTVIERCRIDTGD 244
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
DAI K+ YG P +N+ +R+ VR+
Sbjct: 245 DAICPKT-------TYG-PLVNLTVRDCWVRT 268
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDG+ +T A Q A+ A G+ + +P GR+ L + L
Sbjct: 81 TLNVRDFGAAGDGIKDDTLAIQSAIMACPPQGR-----VLIPAGRYSFVCLFLKDGINLE 135
Query: 136 LADDAEILAIENEKYWPLMPPL-------PSYGYGREHHGPR--FGSFIHGQNLKDVVIT 186
L AE+ A+ + + +P P + Y G P+ F I G ++K+V I
Sbjct: 136 LEKGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNIY 195
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GT+NG + WW ++ + R V + +I + +T+++SP WT+HPY
Sbjct: 196 GE-GTLNGNASHENWWHNCKEMKIA-WRPRAVFLNGCENISLVGLTVKNSPSWTIHPYFS 253
Query: 245 KNVTI--------RNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
++ +++ + +SC + + + SVGDD IA+KSG G Y P
Sbjct: 254 NHLRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTP 313
Query: 297 SMNILIRNL 305
S +I IR
Sbjct: 314 SEHITIRQC 322
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 30/256 (11%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++ DFG GDG+ +T Q A+ A + + + +P G + L ++ +
Sbjct: 81 TLDVRDFGAKGDGIQDDTLFIQAAIMACPEKSR-----VLIPAGTYRIVSLFLKDNVNIE 135
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVIT 186
LA+ A + A + +P+ + SY E++ P F I G N+K+ VI
Sbjct: 136 LAEGAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIY 195
Query: 187 GHNGTINGQGQA----WWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHP 241
G G I+G WW + K+++ P ++ + + + IT+R+SP W +HP
Sbjct: 196 GQ-GIIDGNAGTGEGNWW--HEPKVIHTACRPRMIFLERCRQVTVQGITVRNSPSWNIHP 252
Query: 242 Y--------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
Y D K ++ +++ + +SC+D+ I SVGDD IA+KSG G Y
Sbjct: 253 YFSDHLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTY 312
Query: 294 GRPSMNILIRNLVVRS 309
PS NI IR +R
Sbjct: 313 KCPSKNISIRRCCMRD 328
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 53/279 (18%)
Query: 57 FSFLRWGVASRPIPRLR----PAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGG 112
FS ++ + + P P ++ P F++ D+G +GDG+ +T A Q + A GGG
Sbjct: 15 FSIVQSRLYTLPQPIIQLPHLPHLFSVADYGAIGDGLHYDTAAIQATIDACHS---AGGG 71
Query: 113 QLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFG 172
Q+ PPG +LTA + S + L + + A+IL + +P R
Sbjct: 72 QIRFPPGTYLTATVYIKSGVYLVVEEGAKILGGTKLEDYP--------------EESRRW 117
Query: 173 SFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQK-------------LLNNTRGPLVQIM 219
+ +N DV ITG G I+G G + K++ + L + R LV +
Sbjct: 118 YVLLAENATDVGITG-GGVIDGHGMKFVKRFEEAKNVMVSWNETGACLGDECRPRLVGFL 176
Query: 220 WSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIED 270
++ + NI L + +W LH C N +I + I I + DS + VI
Sbjct: 177 GCRNVRVWNIRLNEPAYWCLHLVGCNNTSIHDVSIYGDFNTPNNDGIDIEDS-NNTVITR 235
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
C IS GDD+I K+ P N+ + N +RS
Sbjct: 236 CSISTGDDSICPKTS--------NGPLYNLTVTNCWLRS 266
>gi|326797921|ref|YP_004315740.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548685|gb|ADZ77070.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 448
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TD G D + TE+ Q+ I K + GGG + +P G +LT L+L +
Sbjct: 58 ITDHGVKTDSTLVQTESIQKI---IDKASENGGGVIVIPKGAFLTGSLFFKPKTHLYLDE 114
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A + +N + ++ G ++ F + I+ L I+G G ING G
Sbjct: 115 GATLKCSDNIADFKVLTTRVE-GQSLKY----FAALINADGLDGFTISGK-GIINGNGLR 168
Query: 199 WWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+W+ + + ++ R L+ I S ++ +S + L +SPFWT H Y C+N+ I
Sbjct: 169 YWQAFWLRREWNPKCTNMDEQRPRLLYISNSKNVQVSGVQLLNSPFWTSHYYKCENLKIL 228
Query: 251 NAFI-------SKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSG 285
I S+++ D C++++I++CYISV DD I +K G
Sbjct: 229 GVRILAGSNNGSEVRAPSSDGIDLDVCQNVLIKNCYISVNDDGICLKGG 277
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 58/264 (21%)
Query: 89 VTLNTEAFQRAVYAISKLGKKGGGQLNVP-------PGRWLTAPFNLTSHMTLFLADDAE 141
VT +A QRA+ + K GG++ +P P + T L S++ L + +A
Sbjct: 84 VTYYGDAIQRAIDEAN--SNKDGGKVIIPGSENPEAPNVYYTGAITLKSNVILEIQKNAI 141
Query: 142 ILAIENE--KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ-- 197
+ + N+ +++PL+ Y F FI+ +++ I G G ++G
Sbjct: 142 LRFVRNKTNEFYPLV-----YTRWEGVEMMNFSPFIYSYEAENIAIVGE-GVLDGNADEF 195
Query: 198 -------AWWKKYRQKL------------------------LNNTRGPLVQIMWSSDILI 226
++K+ Q++ ++ R P +Q S +ILI
Sbjct: 196 NWMPWKFGYFKEEDQQIQRERLFELGQKNADVRTERIFGDDVSTIRPPFIQPYKSKNILI 255
Query: 227 SNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDA 279
++ + +SPFW ++P C+N+ + N + L+ +SC+DM+IE+CY GDD
Sbjct: 256 KDVKIINSPFWEINPVLCENIKVDNIKVG-TNLYNNDGVDPESCKDMIIENCYFLTGDDC 314
Query: 280 IAIKSGWDQYGIAYGRPSMNILIR 303
IAIKSG + G G P+ N++IR
Sbjct: 315 IAIKSGRNNEGRNIGVPTENVIIR 338
>gi|383114421|ref|ZP_09935185.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
gi|313693872|gb|EFS30707.1| hypothetical protein BSGG_1407 [Bacteroides sp. D2]
Length = 436
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G V D L TE Q V S GGG + +P G +L+ L L
Sbjct: 48 FLITDYGVVNDSTLLQTEKIQAVVDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLHL 104
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A + ++ +P++ G ++ F + I+ + ++G G ++G G
Sbjct: 105 EEKAVLKGSDDISDFPVIETRME-GQNLKY----FSALINVDKVNGFTLSGK-GKVDGNG 158
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +WK + + ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 159 ERYWKSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVK 218
Query: 249 IRNAFI----SKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I S ++ D+C++++++ CY+SV DDAIA+K G
Sbjct: 219 LLDLHIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|224137954|ref|XP_002322693.1| predicted protein [Populus trichocarpa]
gi|222867323|gb|EEF04454.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 42/240 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P P ++TDFG +GDG+ +TEA Q + + +N PPG +LTA +L
Sbjct: 5 LPHPTPTTLSVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGIYLTATIHL 64
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSF--IHGQNLKDVVIT 186
S++ L + + A +L G E + F + + +N DV IT
Sbjct: 65 KSNVVLNIQEGATLLG----------------GTKLEDYPKEFNRWYVVLAENASDVGIT 108
Query: 187 GHNGTINGQGQAWWKKYRQK-------------LLNNTRGPLVQIMWSSDILISNITLRD 233
G G ++GQG + K++ ++ L + R LV + +++ + N+ L +
Sbjct: 109 G-GGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSE 167
Query: 234 SPFWTLHPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
+W LH C N I + I I + DS + +I C+I GDDAI K+
Sbjct: 168 PAYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDS-NNTLITRCHIDTGDDAICPKT 226
>gi|86142344|ref|ZP_01060854.1| Exopolygalacturonase precursor [Leeuwenhoekiella blandensis MED217]
gi|85831096|gb|EAQ49553.1| Exopolygalacturonase precursor [Leeuwenhoekiella blandensis MED217]
Length = 442
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ LTD+G + D + TE Q I +GGG + VP G +L+ L+L
Sbjct: 55 YTLTDYGVIKDSTLIQTEKIQAV---IDTAYAQGGGVIIVPEGTFLSGALFFKQGTHLYL 111
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++ + ++ +P++ G+ F + ++ + I+G GT++G G
Sbjct: 112 EENGVLKGSDDISDFPVVVTRIEGETGK-----YFPALVNADGIDGFTISGK-GTLDGNG 165
Query: 197 QAWWKKY--RQK------LLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + R++ + R LV I ++ IS+I L++SPFWT H Y + +
Sbjct: 166 LRYWKAFWLRREWNPDCTNKDEMRPRLVYISHCKNVQISDIKLKNSPFWTTHYYKSEYIK 225
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I+ + D+C++M+I++CY++V DDA+A+K G
Sbjct: 226 LLNLHITSPKEPVKAPSTDAVDIDACQNMLIKNCYMAVNDDAVALKGG 273
>gi|265754983|ref|ZP_06089897.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513278|ref|ZP_08792800.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229437102|gb|EEO47179.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263234594|gb|EEZ20173.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 39/269 (14%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P N+ D+ +T N + I + +KGGG++ +P G+W + L
Sbjct: 60 PTFPDYTVNVKDYA-----ITANKPITELVNRLIMETCQKGGGKVVIPAGKWKSGRIVLK 114
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L L + AEI N K + +P + + GR+ GSFI+ N K++ ITG
Sbjct: 115 SNVNLHLEEGAEIEFSGNPKDY--LPSVYTMHEGRQIISS--GSFIYAFNEKNIAITGK- 169
Query: 190 GTI-----------NGQGQAWWKK-----YRQKLLNNTRG------PLVQIMWSSDILIS 227
G I N AW +K +++ + G ++ + D+LI
Sbjct: 170 GRIYGPPMDLPIRKNSNSIAWIEKDFPERIEERIFDGMDGRRFFAPKVIAPVQCKDVLIE 229
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAI 280
+ + FW ++P C+NV IR ++ + + +++++E C ++ GDD
Sbjct: 230 GMIIERCMFWNINPILCENVIIRGVTVNSVGIPSGDGVDITCSKNVLVEYCTMNCGDDCY 289
Query: 281 AIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
AIK G ++ G G + N++IRN + ++
Sbjct: 290 AIKGGRNEEGARMGISAENVIIRNCLAKA 318
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ FG GDGV+ +T Q A+ A + + +P G + L S +++
Sbjct: 82 TLNVRKFGAKGDGVSDDTTFIQAAIMACPPESR-----VLIPAGTYKITSLFLKSGISVE 136
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHHG--------PRFGSFIHGQNLKDVVIT 186
LA AE+LA + ++ ++P L SY +++ P F I G ++ DV +
Sbjct: 137 LAKGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIISGIDVSDVNLY 196
Query: 187 GHNGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G G+ING + WWK + ++ R ++ + +I + + DSP W +HPY
Sbjct: 197 GE-GSINGAASHENWWKN-EKVMVGAFRPRMLSLNRCRNIRVQGLYFHDSPAWVIHPYFS 254
Query: 245 KNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRP 296
+ N + +SC D+ I S+GDD IA+KSG G Y P
Sbjct: 255 DELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTP 314
Query: 297 SMNILI 302
S NI +
Sbjct: 315 SSNIHV 320
>gi|431798467|ref|YP_007225371.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789232|gb|AGA79361.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 439
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G V D L TE Q I + ++GGG + +P G +L+ L L
Sbjct: 50 YRITDYGVVNDSTVLQTEKIQAV---IDQASEQGGGIIIIPAGTFLSGSLFFKPGTHLHL 106
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+A I ++ ++ L+ G ++ F + ++ + I+G +GT+NG G
Sbjct: 107 EKNAVIKGSDDITHFKLLETRME-GQTLKY----FAALVNADGMDGFTISG-SGTLNGNG 160
Query: 197 QAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+W+ + R++ ++ R ++ I S ++ +S I+L +SPFWT H Y C+NV
Sbjct: 161 HRYWRHFWIRRQFNKNCTNMDEMRPRVLYISNSKNVQVSGISLINSPFWTSHYYKCENVK 220
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
I N I S D+C+++++++C++SV DDAIA+K G
Sbjct: 221 ILNLHIFAPHTTEKAPSSDAIDLDACKNVLVKNCFMSVNDDAIALKGG 268
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 50/252 (19%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSY 160
AI+ + GGG + VP G + T P +L S++ L +A A + E E+Y P + +
Sbjct: 84 AIADVASAGGGTVLVPAGEFYTGPVHLESNINLHIAQGAVLHFYPEPERYKPY---VFTR 140
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA--WW------------------ 200
G E G I+ +V +TG G + G G WW
Sbjct: 141 WEGTELMG--LSPLIYAFEKTNVAVTGK-GILEGGGSHTHWWPWKGKWKEAEWGDHPVEN 197
Query: 201 KKYRQKLL-----------------NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYD 243
+K+ + L N R P +Q + ++LI +T+++SPFW ++P
Sbjct: 198 QKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQPIRCKNVLIEGVTIKNSPFWLVNPVL 257
Query: 244 CKNVTIRNAFI------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
C+NVT++ S ++C+D++I++C GDD IAIKSG + G G S
Sbjct: 258 CENVTVQGIHCESYGPNSDGCDPEACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVAS 317
Query: 298 MNILIRNLVVRS 309
NILI N +++
Sbjct: 318 ENILIENCQMKA 329
>gi|149199370|ref|ZP_01876407.1| putative polygalacturonase [Lentisphaera araneosa HTCC2155]
gi|149137612|gb|EDM26028.1| putative polygalacturonase [Lentisphaera araneosa HTCC2155]
Length = 484
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 31/247 (12%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
+ A + ++ G DGV+ N Q I + +GGG + + G ++ L S+
Sbjct: 5 VNAAQYLASENGVKADGVSNNALILQGL---IDRCASEGGGTVVIDKGVVVSGAITLKSY 61
Query: 132 MTLFLADDAEILAIENEKYWPLMPP--LPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+TL +A DA + + + +P +P L Y P + I+ QN K V + G
Sbjct: 62 VTLEIAKDAVLQNTGDREDYPYVPVDFLSYY--------PERRAMIYAQNQKHVAVVGK- 112
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV-- 247
GTI G+ K++ + + R L++ ++LI +ITL+++ WT H Y C V
Sbjct: 113 GTIEGRSD----KFKARSSESARVSLIRFDGCENVLIKDITLQNASMWTQHYYRCDKVNV 168
Query: 248 ---TIRNAFISKIQL-FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
T++N + L D C D+ I++C I DDAI +K+ R + NIL+
Sbjct: 169 SGITVKNYMKNDDGLNIDGCHDVKIDNCDIRSHDDAITLKT-------CSRRANKNILVT 221
Query: 304 NLVVRSM 310
N + S+
Sbjct: 222 NCRLNSV 228
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
G G + VP G WL+ +L S++ L LA A + ++ + + +PP+ + G E
Sbjct: 88 GSGSVIVPAGIWLSGKIHLESNVNLHLARGAILRFSDDPQDY--LPPVQTSWEGIECFN- 144
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAW--WKKY-----------------------R 204
+ I+ + ++V ITG G I W W R
Sbjct: 145 -YSPLIYAFDCENVAITG-PGRIEPVLDRWKIWSARPKLHMDALVALYDMAYRNVPVADR 202
Query: 205 QKLL--NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS 262
Q + NN R L+Q ++L+ +I++R SPFWTLHP C++VTIR I +
Sbjct: 203 QMAIGQNNLRPHLIQFNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSIQAHGHNND 262
Query: 263 ------CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
++++IEDC GDDA+++KSG D P N+++RN V
Sbjct: 263 GVDPEMSQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRV 313
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 74/299 (24%)
Query: 70 PRLRPAAFNLTDFGG-VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG-RWLTAPFN 127
P A+ +T +G + N +A Q+A+ SK KGGG++ +P ++LT
Sbjct: 39 PHFADKAYVITQYGAKTTNTAAKNQKAIQKAIDLCSK---KGGGRVVIPANQKFLTGAIQ 95
Query: 128 LTSHMTLFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVIT 186
L S + L + + A + A + E Y P + + G E ++ KD+ IT
Sbjct: 96 LKSSVNLEVQEGAVLEFAFQPELY----PIVETSWEGLECFN--LSPCVYAFKAKDIAIT 149
Query: 187 GHNGTINGQG--QAWWK------------------KYRQKLLNN------------TRGP 214
G GTI+G G WW R +LL N R P
Sbjct: 150 G-KGTIDGGGSNDTWWPWNGNPRFGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSP 208
Query: 215 -------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF- 260
LV IL+ ++TL SPFW +HP ++T+R ++++
Sbjct: 209 ERVFTAQDGLRPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVR-----RVKMIN 263
Query: 261 ----------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ C+ ++IEDC+ + GDD IAIKSG ++ G PS NI+IRN +++
Sbjct: 264 DGPNGDGCDPECCDRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKN 322
>gi|284040211|ref|YP_003390141.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283819504|gb|ADB41342.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 442
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
+TD+G D + TEA Q+ I + GGG + +P G +++ L LA+
Sbjct: 55 ITDYGVGSDSTRVQTEAIQKV---IDLAARNGGGIVVIPKGTFMSGALFFKPKTHLHLAE 111
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A +L N+ P LPS G+ F + ++ + I+G GTI+G G
Sbjct: 112 GA-VLKGSND--IADYPKLPSRMEGQNLD--YFAALVNAYQVDGFTISG-KGTIDGNGLR 165
Query: 199 WWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+W+ + R+K L +R LV I +++ + ++ L ++ FWT H Y C NV +
Sbjct: 166 FWEAFWARRKENPNCTNLEVSRPRLVFIWKCNNVQVQDVKLHNAGFWTSHYYQCTNVKVL 225
Query: 251 NAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+A I + D+C +++I+ CY+SV DDAIA+K G
Sbjct: 226 DAHIYSPYKPVKAPSTDAIDIDACSNVLIKGCYMSVNDDAIALKGG 271
>gi|300770109|ref|ZP_07079988.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762585|gb|EFK59402.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 649
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 19/217 (8%)
Query: 75 AAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTL 134
+F +T+FG VGD VTLNT A QR AI GGG + VP G +L+ +L + +TL
Sbjct: 53 TSFLITNFGAVGDKVTLNTAAIQR---AIDSCAASGGGLVVVPAGDFLSGTVHLKTGVTL 109
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
+ + +PL Y R + ++ ++ ++ I+G GTI+G
Sbjct: 110 HVQSGGTLWGSPRVSDYPLNTSPYHYLNNR--------ALVYAKDANNIGISG-TGTIDG 160
Query: 195 QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI 254
QG + + K + R +++ +I++ +I LR++ +WT + C+NV I + +
Sbjct: 161 QGGSSEFQNGGK-EDGMRPKIIEFANCDNIIVKDINLRNAAYWTQYYIYCRNVLIDHINV 219
Query: 255 SKIQLFDS------CEDMVIEDCYISVGDDAIAIKSG 285
F++ E++ I +C I+ DDAI +KSG
Sbjct: 220 FSFANFNNDGIDIDAENVTIRNCTINSQDDAICLKSG 256
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 84/307 (27%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + FN+ +G V DG+TLNT++ A+ A S K GGG + +P G W+T P L
Sbjct: 36 VPTFKKDTFNIIKYGAVADGITLNTKSINNAIDACS---KNGGGVVLIPQGLWMTGPIVL 92
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L + A + +++ +PL+ G H R S + G NL ++ ITG
Sbjct: 93 KSNVNLHIDRAAMVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITG- 146
Query: 189 NGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISN-------------ITLRD-- 233
G I+G G W+ + L T +++ S ++ N ++D
Sbjct: 147 GGIIDGNGTGVWRAIGKDRL--TESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVS 204
Query: 234 --SPFWTLHPYD---------------CKNVTIRNAFISKIQLFDS---------CEDMV 267
P +L Y+ CK + +S +S CED+
Sbjct: 205 LLKPGKSLSDYEEYKDYFRPNMVVLTGCKKI-----LLSGTTFQNSPNWCLHTLLCEDLT 259
Query: 268 IEDCYI---------------------------SVGDDAIAIKSGWDQYGIAYGRPSMNI 300
++D ++ GDD + IKSG D+ G G P+ N+
Sbjct: 260 LQDVHVRNPWNAQNGDAIDVESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENV 319
Query: 301 LIRNLVV 307
++RN +V
Sbjct: 320 VMRNNIV 326
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 36/234 (15%)
Query: 102 AISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSY 160
I +L +GGG + +P G+WL+ L S + L +A AEI+ E Y +P + +
Sbjct: 48 TIEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGGCAEDY---LPAVFTR 104
Query: 161 GYGREHHGPRFGSFIHGQNLKDVVITGH----------------NG-TINGQGQAWWKKY 203
G E GP G+FI+ N +++ ITG NG ++ + W
Sbjct: 105 HEGVEIMGP--GAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPV 162
Query: 204 RQKLLNNTRG------PLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKI 257
Q++ + G + + ++LI IT+ S W + P C+NV IR ++
Sbjct: 163 EQRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNST 222
Query: 258 QL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
++ +SC++++IE C ++ GDD +K+G G+ G+ + N++IR+
Sbjct: 223 EVPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH 276
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNT+AFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTQAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A E + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEEAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I SS++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNT+AFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTQAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A E + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEEAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQKLL------NNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ + R L+ I SS++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|295132878|ref|YP_003583554.1| glycoside hydrolase [Zunongwangia profunda SM-A87]
gi|294980893|gb|ADF51358.1| glycoside hydrolase family protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 35/250 (14%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLFL 136
N+ DFG V D T N+ + Q+ + + LG GG++ +P G+ +L+ PFNL S++ L L
Sbjct: 5 NIQDFGAVNDDFTNNSVSIQKTIDYCAALG---GGKVVIPAGKPYLSGPFNLKSNIELHL 61
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + A +E + + G G +I G+NL + ITG GT++G G
Sbjct: 62 EHGAVLKAYPDESVYTKSAFRQNMGEGT--------IWIGGENLNQISITG-GGTLDGNG 112
Query: 197 -----QAWWKKYRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
Y K + R ++ ++ +I + +T+ ++ +W LH C +V I
Sbjct: 113 IFFMGDELHDSYELKPFETIDPRPHMLTLVSCKNIKMYGVTVSNAAYWALHFIGCYDVAI 172
Query: 250 RN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYGRPSMN 299
N + + +++ D C+++ I +C+I GDD I +K+ +++ G P N
Sbjct: 173 ENISLYNDLKVRNSDGIDLDHCQNIRISNCHIESGDDCICLKNRREYEELG-----PCRN 227
Query: 300 ILIRNLVVRS 309
I+I N + S
Sbjct: 228 IVISNCTLIS 237
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 49/277 (17%)
Query: 69 IPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNL 128
+P + FN+TD+G +T NT+AF++A I++ K GGG++ VP G WLT P L
Sbjct: 56 LPTFQNKDFNITDYGAESGSITKNTDAFKKA---ITECNKVGGGRVVVPAGTWLTGPIEL 112
Query: 129 TSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH 188
S++ L+L A ++ N + + + + + I G NL ++ ITG
Sbjct: 113 KSNVNLYLDSGALVIFSSNPEDYKKTDE-------KNSSSNSYKNLISGSNLSNIAITG- 164
Query: 189 NGTINGQGQAW------------WKKY----------------RQKLLNNTRGPLVQIMW 220
+G +NG G W WK + ++++N R L+ +
Sbjct: 165 DGVLNGNGAFWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSN 224
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK---IQLFD-----SCEDMVIEDCY 272
+L+ + +SP + + +N+ +RN I Q D +C++++I +
Sbjct: 225 CKSVLLDGPSFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDT 284
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSM-NILIRNLVVR 308
++ GDD I +KSG P++ N++I N +V
Sbjct: 285 VNTGDDGICMKSGS-SSKSNNDEPTLENVVIENCIVN 320
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++ FG G +T A Q+A I+K GG ++ P G++L+ L S++ L
Sbjct: 21 YDVNKFGADSTGRKPSTHAIQKA---INKAASNNGGTVHFPHGQYLSGAIELKSNIILDF 77
Query: 137 ADDAEILAIENEK-YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
ADD + +++ K Y PL LP+ P +F H ++ I G N ++G
Sbjct: 78 ADDVVLKFLDDPKEYPPLHKKLPNGKIVNLQFTPLIRAFDH----INITIRG-NAVLDGH 132
Query: 196 GQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFIS 255
G+ WWK+ +TR +QI W + + NIT++ SP + ++ +C +VTIR I
Sbjct: 133 GETWWKRMPPP---STRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDVTIRGIKIR 189
Query: 256 KIQLF------------DSCEDMVIEDCYISVGDDAIAIKS 284
+ +SC + I IS GDD IA+ +
Sbjct: 190 NPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIALDA 230
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 123/289 (42%), Gaps = 65/289 (22%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + + FG V D L+TEA Q+A I GGG + +
Sbjct: 40 LSWADSVGSRQLPGDK-MIISANSFGAVADSTVLSTEAIQKA---IDSCAVSGGGTVVLQ 95
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L + +LA P + HH P F S I G
Sbjct: 96 PGYYQTGALFVKSGVNLQIGKGVTLLA---------SPDI--------HHYPEFRSRIAG 138
Query: 178 QNL------------KDVVITGHNGTINGQGQAWWKKY---RQKL------------LNN 210
+ K+ I+G GT++ +G+ +W KY R++
Sbjct: 139 IEMTWPAAVINIVDEKNAAISGE-GTLDCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKR 197
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQL 259
RG LV+ SSDI +S TL + FW L+ C +TI N I +
Sbjct: 198 VRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDI 255
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
SC +++IE+C + DD I IKSG D G+ RP+ N+++RN R
Sbjct: 256 DSSC-NILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR 303
>gi|29349557|ref|NP_813060.1| exo-poly-alpha-D-galacturonosidase, partial [Bacteroides
thetaiotaomicron VPI-5482]
gi|29341467|gb|AAO79254.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 352
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 39/271 (14%)
Query: 64 VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLT 123
V SR +P + + FG V D L+TEA Q+A I GGG + + PG + T
Sbjct: 46 VGSRQLPGDK-MIISANSFGAVADSTVLSTEAIQKA---IDSCAVSGGGTVVLQPGYYQT 101
Query: 124 APFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDV 183
+ S + L + +LA + ++P S G E P + I+ + K+
Sbjct: 102 GALFVKSGVNLQIGKGVTLLASPDIHHYP---EFRSRIAGIEMTWP--AAVINIVDEKNA 156
Query: 184 VITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSSDILISN 228
I+G GT++ +G+ +W KY R++ RG LV+ SSDI +S
Sbjct: 157 AISGE-GTLDCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVE--RSSDITLSG 213
Query: 229 ITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDCYISVGD 277
TL + FW L+ C +TI N I + SC +++IE+C + D
Sbjct: 214 FTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILIENCDVDCND 272
Query: 278 DAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
D I IKSG D G+ RP+ N+++RN R
Sbjct: 273 DNICIKSGRDADGLRVNRPTENVVVRNCTAR 303
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 123/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + S GGG + +
Sbjct: 45 LSWADSVGSRQMPG-NSLILSANSFGAVADSTVLSTEAIQKAIDSCSV---SGGGTVTLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA + ++P S G E P + I+
Sbjct: 101 PGYYQTGALFVKSGVNLQLDKGVTLLASPHIHHYP---EFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWW-------KKYRQKLL--------NNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W K+Y +K L RG LV+ SS
Sbjct: 156 VNEKNAAVSGE-GTLDCRGKVFWDKYWEMRKEYEKKGLRWIVDYDCKRVRGILVE--RSS 212
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-----------IQLFDSCEDMVIEDC 271
DI + TL + FW TI I+ I + DS +++IE+C
Sbjct: 213 DITLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGGHGPSTDGIDI-DSSTNILIENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ NI+IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIAR 308
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 34/251 (13%)
Query: 82 FGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAE 141
FG GDGV+ +T A Q A+ A GG + + GR+L+AP L S M + L + A
Sbjct: 83 FGAKGDGVSDDTAALQAALMACPP-----GGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 142 ILAIENEKYWPLMPPLPSYGYGREH-------------HGPRFGSFIHGQNLKDVVITGH 188
IL + WP++P + G +H H F + + QN++ I G
Sbjct: 138 ILGHRDITKWPVLPGVLPDAEGVKHTCLGSWEGEADACHAGLF-NLLFAQNVQ---IYGR 193
Query: 189 NGTINGQG--QAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G ++ Q WW++ + + + R L+ ++ +++ +TL++SP WT+HP +
Sbjct: 194 -GVMDAQAGFDTWWERPKARFI-GWRPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRG 251
Query: 247 VTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
+T + I +S D+VI +VGDD IA+KSG RP+
Sbjct: 252 LTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTR 311
Query: 299 NILIRNLVVRS 309
+ I N ++
Sbjct: 312 RVRISNCRMKD 322
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 125/277 (45%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + + FG V D L+TEA Q+A I GGG + +
Sbjct: 40 LSWADSVGSRQLPGDK-MIISANSFGAVADSTVLSTEAIQKA---IDSCAISGGGTVVLQ 95
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L + +LA + ++P S G E P + I+
Sbjct: 96 PGYYQTGALFVKSGVNLQIGKGVTLLASPDIHHYP---EFRSRIAGIEMTWP--AAVINI 150
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
+ K+ I+G GT++ +G+ +W KY R++ RG LV+ SS
Sbjct: 151 VDEKNAAISGE-GTLDCRGKVFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVE--RSS 207
Query: 223 DILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDC 271
DI +S TL + FW L+ C +TI N I + SC +++IE+C
Sbjct: 208 DITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILIENC 266
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ RP+ N+++RN R
Sbjct: 267 DVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR 303
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 62/334 (18%)
Query: 19 LRRWVPAFLSSHKTLFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAAF- 77
++RW+ A +S + V A S + Q A W VA + R++ F
Sbjct: 6 MKRWIGA--ASFAAVALVNSAVAAESPAVSQEEA-------YEWLVADEILERIQAPVFP 56
Query: 78 ----NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
++ ++G V +A +A+ A + GGG + VP G + T P +L S++
Sbjct: 57 EVVYDIREYGAEEGVVGGAGDAIAKAIEACNA---GGGGTVLVPAGTYHTGPVHLLSNVN 113
Query: 134 LFLADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L +A+ A + + E + Y +P + + G E + + I+ ++ +TG GT+
Sbjct: 114 LHVAEGATLKFSTEAKDY---LPAVFTRWEGVECY--NYSPLIYAFEQTNIAVTGK-GTL 167
Query: 193 NGQ---------------GQAWWKKYRQKLL-----------------NNTRGPLVQIMW 220
+GQ G + R +L+ + R +Q
Sbjct: 168 DGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDERVFGEGDFLRPNFLQPYR 227
Query: 221 SSDILISNITLRDSPFWTLHPYDCKNVTIRN-AFISKIQLFDSC-----EDMVIEDCYIS 274
++LI ++T+ +SP W +HP +NVT+R +S D C +D++IE+C
Sbjct: 228 CDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVSHGSNNDGCNPESSKDVLIENCVFD 287
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
GDD IAIKSG + G PS NI++RN ++
Sbjct: 288 TGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMK 321
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 124/289 (42%), Gaps = 65/289 (22%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + + FG V D L+TEA Q+A I GGG + +
Sbjct: 40 LSWADSVGSRQLPGDK-MIISANSFGAVADSTVLSTEAIQKA---IDSCAVSGGGTVILQ 95
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L + +LA P + HH P F S I G
Sbjct: 96 PGYYQTGALFVKSGVNLQIGKGVTLLA---------SPDI--------HHYPEFRSRIAG 138
Query: 178 QNL------------KDVVITGHNGTINGQGQAWWKKY---RQKLL------------NN 210
+ K+ ++G GT++ +G+ +W KY R++ +
Sbjct: 139 IEMTWPAAVINIVDEKNAAVSGE-GTLDCRGKVFWDKYWEMRKEYVAKGLRWIVDYDCKR 197
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQL 259
RG LV+ SSDI +S TL + FW L+ C +TI N I +
Sbjct: 198 VRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDI 255
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
SC +++IE+C + DD I IKSG D G+ RP+ N+++RN R
Sbjct: 256 DSSC-NILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTAR 303
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 110 GGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGP 169
GGG + VP G +LT L S++ L L+ A + ++ K +P++ + H
Sbjct: 30 GGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVHRK 84
Query: 170 RFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT--RGPLVQIMWSSDILIS 227
+ S I+ QN++++ +TG GT++G G+ WW +R + N R L+ I +
Sbjct: 85 VYASCIYAQNVENISVTGF-GTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRITVK 143
Query: 228 NITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDA 279
+I L SP WT++P C N T N I +SC+++ I + +I VGDD
Sbjct: 144 DIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNYHIDVGDDC 203
Query: 280 IAIKSGWDQYGIAYGRPSM-NILIRNLVV 307
IAIK+G + Y R + NI I N +
Sbjct: 204 IAIKAGTED---TYERIACENITITNCTM 229
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 47/274 (17%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
PR+ F +TD G G + ++ AI+ +KGGG++ VPPG + T +L
Sbjct: 57 PRIPQRRFTVTDHGADPTG---HRDSTHAIAAAIATAARKGGGKVVVPPGEYHTGAIHLR 113
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L ++ A + ++ + +P + + G E + + F++ + DV ITG
Sbjct: 114 SNIELHISRGATLRFSQDPADY--LPMVHTRWEGIELYN--YSPFVYAHGVHDVAITG-G 168
Query: 190 GTINGQG--QAWW--------------KKYRQKLL----------------NNTRGPLVQ 217
G ++GQ Q WW ++R L + R VQ
Sbjct: 169 GVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMAERGVPVEQRRFTDSKLRPNFVQ 228
Query: 218 IMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI-------SKIQLFDSCEDMVIED 270
SSDIL+S +TL +SP W +HP +NV + + S +S ++VI +
Sbjct: 229 FYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDSPDGPNSDGVNPESSRNVVIRN 288
Query: 271 CYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRN 304
GDD IAIKSG + G G PS NI+I +
Sbjct: 289 SSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHD 322
>gi|336414751|ref|ZP_08595095.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
gi|335942121|gb|EGN03969.1| hypothetical protein HMPREF1017_02203 [Bacteroides ovatus
3_8_47FAA]
Length = 436
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G V D L TE Q + S GGG + +P G +L+ L L
Sbjct: 48 FLITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVIVIPEGTYLSGALFFKPGTHLHL 104
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++ +P++ G ++ F + I+ + ++G G ++G G
Sbjct: 105 EKKAVLKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGNG 158
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +WK + + ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 159 ERYWKSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVK 218
Query: 249 IRNAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I + D+C++++++ CY+SV DDAIA+K G
Sbjct: 219 LLDLHIFSPSFPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|298482127|ref|ZP_07000315.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
gi|298271684|gb|EFI13257.1| galacturan 1,4-alpha-galacturonidase [Bacteroides sp. D22]
Length = 436
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
F +TD+G V D L TE Q + S GGG + +P G +L+ L L
Sbjct: 48 FLITDYGVVNDSTLLQTEKIQAVIDLASN---NGGGVVVIPEGTYLSGALFFKPGTHLHL 104
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + ++ +P++ G ++ F + I+ + ++G G ++G G
Sbjct: 105 EKKAVLKGSDDISNFPVIETRME-GQNLKY----FSALINVDKVDGFTLSGK-GKVDGNG 158
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+ +WK + + ++ R L+ I S+++ +S++ L +SPFWT H Y C +V
Sbjct: 159 ERYWKSFWLRRSVIPKCTNMDELRPRLLHISHSNNVQVSDVRLVNSPFWTTHIYKCDSVK 218
Query: 249 IRNAFI----SKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ + I S ++ D+C++++++ CY+SV DDAIA+K G
Sbjct: 219 LLDLHIFSPSSPVKAPSTDAIDIDACKNVLVKGCYMSVNDDAIALKGG 266
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 60/275 (21%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLFL 136
++ D G VGDG T ++ A + A+ A ++ +P R ++ P NLTS+ L +
Sbjct: 380 DVADHGAVGDGQTDDSRALRSALAACD--------EVVIPRHRSCVSGPLNLTSNQVLRV 431
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGRE------------------HHGPRFGSFIHGQ 178
D +LA +PLM P+ YG+ R+ H P G++
Sbjct: 432 --DGALLASTIPAQYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAY---- 485
Query: 179 NLKDVVITGHNGTINGQGQ---AWWKKYRQK----------------LLNNTRGPLVQIM 219
N +V + G G I+G+ WW + L +R L++
Sbjct: 486 NASNVSVVG-GGVIDGRAGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQ 544
Query: 220 WSSDILISN------ITLRDSPFWTLHPYDCKNVTIRNAFISK-IQLFDSCEDMVIEDCY 272
+ + + ++ + L+DSPFWTL P +NV +R+ I+ I+ +E+ Y
Sbjct: 545 YVTGLTVAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGVENVY 604
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
++ DD + +KSG D +GI P+ ++L+RN+
Sbjct: 605 VNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITC 639
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNTEAFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTEAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEVAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGE-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I SS++L+ ++TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 28/255 (10%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ DFG GDGV +T Q A+ K G++ VP G + + L + L
Sbjct: 101 TLNVRDFGAKGDGVQDDTGFIQAAIMCCPK-----NGRVLVPEGIYRVSSLFLKDDLRLE 155
Query: 136 LADDAEILAIENEKYWPLMPPL-PSYGYGREHH------GP--RFGSFIHGQNLKDVVIT 186
+ A + A + +P++ L SY E++ P F + I G N+K+VV+
Sbjct: 156 IGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLY 215
Query: 187 GHNGTING----QGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY 242
G G I G + WW + + + R ++ + +++ I +++SP W +HPY
Sbjct: 216 GQ-GLIEGNAGYEEDNWWYNAKVRRIA-FRPRMIFLNHCEHVVVQGIRVQNSPSWNIHPY 273
Query: 243 --------DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYG 294
D + +++ + +SC+D+ I Y S+GDD IAIKSG G Y
Sbjct: 274 FSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYR 333
Query: 295 RPSMNILIRNLVVRS 309
PS +I+IR +R
Sbjct: 334 VPSEDIVIRQCCMRD 348
>gi|354603313|ref|ZP_09021312.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
gi|353349190|gb|EHB93456.1| hypothetical protein HMPREF9450_00227 [Alistipes indistinctus YIT
12060]
Length = 497
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 45/261 (17%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
+L + ++DFG DG+TLNT A QRA+ A++ ++GGG+L PG++LT L S
Sbjct: 19 QLSAKDYQVSDFGAKADGITLNTGAIQRAIDAVN---ERGGGRLVFGPGKYLTGSIYLKS 75
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
++TL L A +L N + Y ++ + R+ + + +++ ITG G
Sbjct: 76 NVTLHLERGAVLLGSTN-----------PFDYVKDPY-VRWMAMVFAMKQENIGITGK-G 122
Query: 191 TINGQGQAWWK---KYRQKLL----------NNTRGPL-VQIMWSSDILISNITLRDSPF 236
TI+GQG +Y Q+ + N T P + +++ I+ ITLRD
Sbjct: 123 TIDGQGFKTANNMVQYIQRGIYEDPLKLDRPNETNRPENIYFRECTNVTITGITLRDPAS 182
Query: 237 WTLHPYDCKNVTIRNAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQ 288
W CKNV + + ++ I + D C+ +VI++ + + DD + KS D
Sbjct: 183 WNQTYDQCKNVYVDDIYVEANSYWNNDGIDIVD-CDGVVIKNSFFNAADDVLCFKS-HDA 240
Query: 289 YGIAYGRPSMNILIRNLVVRS 309
I N+++ N V RS
Sbjct: 241 NSIC-----QNVVVDNCVGRS 256
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 8/101 (7%)
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF--------DS 262
TR L+++M+S +I ISN+TL +SP W +HP N+ ++ I DS
Sbjct: 99 TRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINPDS 158
Query: 263 CEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIR 303
C ++ IEDCYI GDD +A+KSGWD+YGI +G P+ ++I
Sbjct: 159 CTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 38/249 (15%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEI-LAIENEK 149
+ T+A Q A+ +SK K GG + VP G W T +L S++ L +++ AE+ + E E
Sbjct: 84 MATKAIQSAIDEVSK---KKGGTVIVPAGTWRTGRISLKSNVNLHISEGAELRFSPEIED 140
Query: 150 YWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR----- 204
Y +P + + G E G+ I+ +++ +TG + ++Y
Sbjct: 141 Y---LPAVFTRNEGVELMS--LGALIYANGQENIAVTGKGKLVGPPDGPVRQRYMNVNVI 195
Query: 205 QKLLNNTRGPLVQIMWSSD-----------------ILISNITLRDSPFWTLHPYDCKNV 247
+K++ + ++ D + I ITL ++PFW + P C NV
Sbjct: 196 EKVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNV 255
Query: 248 TIRNAFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNI 300
IR + + + +S +++IE C +S GDD IK+G + GI +P+ N+
Sbjct: 256 IIRGITVQSVGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENV 315
Query: 301 LIRNLVVRS 309
+IR+ + R
Sbjct: 316 VIRHCLARE 324
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 54/266 (20%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLF 135
+++T +G VGDG T + A Q A+ A + GGG++ + G + ++ L S++ L
Sbjct: 3 YSVTKYGAVGDGATNDAAAIQSAIDACNA---AGGGRVVLEGGHTYYSSSIELKSNVELH 59
Query: 136 L-------------------ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
L DDA + A+ K P+Y +FIH
Sbjct: 60 LEQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAY------------TFIH 107
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---RGPLVQIMWSSDILISNITLRD 233
++ + ITG G ++G A+ K+ + N R +V + + I ++TL++
Sbjct: 108 AKDADNFSITGQ-GAVDGNVYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQN 166
Query: 234 SPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS- 284
SPFWTLHP C +V I N + S D ++ I C++ DD I +K+
Sbjct: 167 SPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTT 226
Query: 285 -GWDQYGIAYGRPSMNILIRNLVVRS 309
G ++YG P+ N++I N + S
Sbjct: 227 AGNNEYG-----PTKNVIISNCTLTS 247
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 120/298 (40%), Gaps = 69/298 (23%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P R ++ G DGVTLN++ A I+K + GGG + +P G WLT P +
Sbjct: 262 PHFRRDTLSIVALGAKADGVTLNSKIINAA---ITKASENGGGVVMIPAGLWLTGPIVMK 318
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGH- 188
S++ L+LA +A + + +PL+ P I N +++ ITG
Sbjct: 319 SNVNLYLAPNALLQFTTDFDQYPLVETTYEGLKAMRCQAP-----ISAVNAENIAITGKG 373
Query: 189 ---------------------------NGTINGQG-QAWWKKYRQKLLNNT--------- 211
+G I G+ + W+ + + ++T
Sbjct: 374 IIDGGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTWYPSAKSQKGSHTKLAGVIESG 433
Query: 212 -------------RGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-- 256
R ++ I +L+ +T ++SP W LHP +++T+R+ +
Sbjct: 434 KTAADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPW 493
Query: 257 -------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
I L +SC IE C VGDD I IKSG D+ G G + ++++ N V
Sbjct: 494 YAQNGDGIDL-ESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTV 550
>gi|307132357|ref|YP_003884373.1| Polygalacturonase [Dickeya dadantii 3937]
gi|306529886|gb|ADM99816.1| Polygalacturonase [Dickeya dadantii 3937]
Length = 459
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 23/253 (9%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTS 130
R++ ++ + DGVT +TE FQRA I L +GGG L V PGR+L L S
Sbjct: 12 RIKTMRLSIRSYTPAADGVTPDTELFQRA---IDDLTAQGGGTLVVEPGRYLLGGLRLPS 68
Query: 131 HMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNG 190
+ L L AE++A + + +F++ + +++ + G G
Sbjct: 69 NFCLQLDAGAELIASACYDDFAQTTTVSVAELSDR-------AFLYARRQRNITLCG-KG 120
Query: 191 TINGQGQAWWKKYRQ----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
I G A++ +L R ++ + + + ++T+ +P WT+H C+
Sbjct: 121 KITGNADAYFSAEPDEQGYRLPAQHRPRILVLEDCEQVNLQDLTIEQAPMWTVHLVSCRQ 180
Query: 247 VTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V + + DSC+D+ + C++S DDA+ IK+ + Y M
Sbjct: 181 VNVERLTVDNDMTMANTDALNLDSCQDVTVHHCHLSAADDALCIKTTAKPPAMQYKAQRM 240
Query: 299 NILIRNLVVRSMV 311
+ L RS
Sbjct: 241 TVSHCRLRSRSCA 253
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 59/260 (22%)
Query: 94 EAFQRAVYAISKLGKKGGGQLNVP-------PGRWLTAPFNLTSHMTLFLADDAEILAIE 146
+A Q+A I++ GGG++ + P + T + S++ L + ++A + +
Sbjct: 87 DAIQKA---INEASFNGGGKVVIKGSDDSQNPNVYYTGAIYIKSNIELHIEENAILKFVR 143
Query: 147 NE--KYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAW----W 200
N+ +++PL+ Y F FI+ ++ ITG G ++G + W
Sbjct: 144 NKTNEFYPLV-----YTRWEGIEMMNFSPFIYSYEENNIAITGK-GILDGCADEFNWMPW 197
Query: 201 K----------KYRQKLLN-------------------NTRGPLVQIMWSSDILISNITL 231
K R++L N R P +Q +++ILI +IT+
Sbjct: 198 KFGYFNEEDQQIQRERLFNMGQEGVDVRNERIFSDDISTIRPPFIQPYKTNNILIRDITI 257
Query: 232 RDSPFWTLHPYDCKNVTIRNAFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKS 284
+SPFW ++P C+N+ + I L+ +SC+DM+IE+CY GDD IAIKS
Sbjct: 258 LNSPFWEVNPVLCENIKVSGIRID-TNLYNNDGVDPESCKDMIIENCYFLTGDDCIAIKS 316
Query: 285 GWDQYGIAYGRPSMNILIRN 304
G + G G P+ NI+IRN
Sbjct: 317 GRNNEGRNIGIPTSNIIIRN 336
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 54/266 (20%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTLF 135
+++T +G VGDG T + A Q A+ A + GGG++ + G + ++ L S++ L
Sbjct: 3 YSVTKYGAVGDGATNDAAAIQSAIDACNA---AGGGRVVLEGGHTYYSSSIELKSNVELH 59
Query: 136 L-------------------ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
L DDA + A+ K P+Y +FIH
Sbjct: 60 LEQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAY------------TFIH 107
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNT---RGPLVQIMWSSDILISNITLRD 233
++ + ITG G ++G A+ K+ + N R +V + + I ++TL++
Sbjct: 108 AKDADNFSITGQ-GAVDGNVYAFMKRASRYYFNGDFYPRPTMVYVEHCNHISFHDVTLQN 166
Query: 234 SPFWTLHPYDCKNVTIRNAFI--------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS- 284
SPFWTLHP C +V I N + S D ++ I C++ DD I +K+
Sbjct: 167 SPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLKTT 226
Query: 285 -GWDQYGIAYGRPSMNILIRNLVVRS 309
G ++YG P+ N++I N + S
Sbjct: 227 AGNNEYG-----PTKNVIISNCTLTS 247
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + S GGG + +
Sbjct: 45 LSWADSVGSRQMPG-NNLILSANSFGAVADSTVLSTEAIQKAIDSCSV---SGGGTVTLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA + ++P S G E P + I+
Sbjct: 101 PGYYQTGALFVKSGVNLQLDKGVTLLASPHIHHYP---EFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W KY R++ RG LV+ SS
Sbjct: 156 VNEKNAAVSGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSS 212
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-----------IQLFDSCEDMVIEDC 271
DI + TL + FW TI I+ I + DS +++IE+C
Sbjct: 213 DITLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGGHGPSTDGIDI-DSSTNILIENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ NI+IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIAR 308
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNT+AFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTQAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A E + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEEAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I S+++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|399028719|ref|ZP_10729875.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073555|gb|EJL64725.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 36/251 (14%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP-PGRWLTAPFNLTSHMTLF 135
+++ +G GDG T + A Q+A+ A SK G GQ+ +P P +L+ PFN+ S++ L
Sbjct: 24 YDVKKYGAKGDGKTNDAIAIQKAIDACSKTG----GQVLIPAPFTFLSGPFNVKSNVDLH 79
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
+ A+ILA +EK + + G G +I G+N+++ I+G +G I+G
Sbjct: 80 IEGGAKILASPDEKLYTESAFRDNKGEGT--------IWIGGKNIENFTISG-SGKIDGN 130
Query: 196 GQAWW-----KKYRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
G ++ Y K N + R ++ I+ +I I ++ + +S +WT+H C +V
Sbjct: 131 GISFMGAEEEDAYVLKPFNILDPRPHVLTIIGGKNIRIKDVHIGNSAYWTVHLVGCNDVV 190
Query: 249 IRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYGRPSM 298
I ++ +++ D +++ I DCYI GDD I +K+ ++++G
Sbjct: 191 ISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEEFG-----ACE 245
Query: 299 NILIRNLVVRS 309
NI + N + S
Sbjct: 246 NITVTNCTMTS 256
>gi|427402267|ref|ZP_18893339.1| hypothetical protein HMPREF9710_02935 [Massilia timonae CCUG 45783]
gi|425718800|gb|EKU81743.1| hypothetical protein HMPREF9710_02935 [Massilia timonae CCUG 45783]
Length = 432
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 32/255 (12%)
Query: 78 NLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
++T +G V D T+NT A Q+ + A L +GGG + VP G +++ + L LA
Sbjct: 36 DITAYGAVADDKTVNTAAIQQTIDA---LAARGGGTVVVPRGVFVSGALFFKPGVHLHLA 92
Query: 138 DDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQ 197
A + + ++P+ G+ E+ P + ++ ++G GT++G G+
Sbjct: 93 KGAVLKCSTDLSHFPVRRTRIE-GHFAENFNP---ALVNADGCDGFHLSG-EGTLDGAGR 147
Query: 198 AWWKKY---RQKL--------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
W ++ R+ ++ R L I S + + +T +DS FW LH Y C++
Sbjct: 148 PIWDRFWTLRKAYKDPGNFPNISVPRARLALIERSRGVTVEGVTFKDSQFWNLHLYRCQD 207
Query: 247 VTIRNA-FISKIQL----------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGI--AY 293
VT+++A F+ DSC+ + I+ CY SV DD IA K + +
Sbjct: 208 VTVKHARFVVPDDYEQAPSTDGIDLDSCQRVTIDGCYFSVTDDCIAAKGSRGPFALQDKD 267
Query: 294 GRPSMNILIRNLVVR 308
P + + +RN R
Sbjct: 268 SPPVVGVHVRNCEFR 282
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNTEAFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTEAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEVAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I SS++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNTEAFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTEAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEVAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I SS++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 78 NLTDFGGVGD--GVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
++T +G G + LNTEAFQ+A I GGG ++VP G +L P L S++ L
Sbjct: 37 DVTQYGAEGHRLQIALNTEAFQKA---IDDCAAAGGGTVHVPRGNYLVDPLFLKSNIRLD 93
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
LA DA I+A + Y +G + FI + ++V ITG GTI+GQ
Sbjct: 94 LAKDATIVASTEIAAYRATEKTK---YAEAENG--WLPFISIADAQNVAITGQ-GTIDGQ 147
Query: 196 GQAWWKKYRQ------KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL-----HPYDC 244
G WW+++R+ K R L+ I SS++L+ +TL SP + + H D
Sbjct: 148 GAVWWERWRENIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRYSHDVDV 207
Query: 245 KNVTIRNAF----ISKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
I + + I DS +++ I + YI DD IAIK+
Sbjct: 208 NGTRILSPWHAPNTDAIDPIDS-QNIRITNNYIDCNDDHIAIKA 250
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + S GGG + +
Sbjct: 45 LSWADSVGSRQMPG-NSLILSANSFGAVADSTVLSTEAIQKAIDSCSV---SGGGTVTLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA + ++P S G E P + I+
Sbjct: 101 PGYYQTGALFVKSGVNLQLDKGVTLLASPHIHHYP---EFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W KY R++ RG LV+ SS
Sbjct: 156 VNEKNAAVSGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVE--RSS 212
Query: 223 DILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-----------IQLFDSCEDMVIEDC 271
D+ + TL + FW TI I+ I + DS +++IE+C
Sbjct: 213 DVTLKGFTLMRTGFWGCQVLYSNYCTIDGLVINNNLGGHGPSTDGIDI-DSSTNILIENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ N++IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR 308
>gi|297817564|ref|XP_002876665.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
gi|297322503|gb|EFH52924.1| hypothetical protein ARALYDRAFT_907788 [Arabidopsis lyrata subsp.
lyrata]
Length = 131
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + ++T+FG VGDGVTLNT+AFQ A++ ++ KGG +L VP G+WLT F+L SH+
Sbjct: 40 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 99
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSY 160
TL+L A IL + + L L +Y
Sbjct: 100 TLWLDKGATILG--STASFCLFESLQAY 125
>gi|251788461|ref|YP_003003182.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247537082|gb|ACT05703.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 444
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 23/239 (9%)
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
DG+T +T FQ+A I +L +GGG L V PGR+L +L S+ L L AE++A
Sbjct: 11 AADGITPDTALFQQA---IDELAAQGGGTLVVEPGRYLLGGLHLPSNFCLQLDAGAELIA 67
Query: 145 IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR 204
+ + + +F++ + +++ ++G G I G A++
Sbjct: 68 SADYDDFAQNTTVSVAELSDR-------AFLYARQQRNITLSGQ-GKIIGNADAYFSAQP 119
Query: 205 Q----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL- 259
+L R ++ + + I +T+ ++P WT+H C+ V + +
Sbjct: 120 DEQGYRLPARHRPRILVLEDCEQVKIQGVTIENAPMWTVHLVSCRQVNVERLTVDNDMTM 179
Query: 260 -------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSC+D+ + DC++S DDA+ IK+ + Y M + L RS
Sbjct: 180 ANTDALNLDSCQDVTVRDCHLSAADDALCIKTTAKPPAMQYKAQRMTVSHCRLRSRSCA 238
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 42/277 (15%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR P R + N FG V D L+TEA Q+A I + GGG + +
Sbjct: 40 LSWADSVGSRQQPDGRIISAN--SFGAVADSTRLSTEAIQKA---IDECSAAGGGTVILA 94
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG +L + S + L L +LA + +P S G E P + ++
Sbjct: 95 PGYYLVGALFIKSGVNLQLDKGVTLLASTDINNYP---EFRSRIAGIEMIWP--SAVLNV 149
Query: 178 QNLKDVVITGHNGTINGQGQAWW-------KKYRQKLL--------NNTRGPLVQIMWSS 222
K+V I+G G I+ +G+ +W ++Y +K L RG LV+ S+
Sbjct: 150 IKQKNVAISGE-GMIDCRGKKFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVE--RST 206
Query: 223 DILISNITLRDSPFWT---LHPYDC--------KNVTIRNAFISKIQLFDSCEDMVIEDC 271
D+ + + TL + FW L+ C N+ R + + DS +++IE+C
Sbjct: 207 DVTLKDFTLMRTGFWACQILYSDYCSINGLTINNNIGGRGPSTDGVDI-DSSTNILIENC 265
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
I DD I +KSG D G+ RP+ N++IRN R
Sbjct: 266 MIDCNDDNICLKSGRDTDGLRVNRPTENVVIRNCTTR 302
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 57/283 (20%)
Query: 70 PRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLT 129
P + +TD+ D +L T+A +A I++ +GGG++ +P G + TAP L
Sbjct: 17 PTFPDKNYVITDYYDGKD--SLYTKAINQA---ITECSVQGGGKVIIPKGIYPTAPIRLK 71
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
S++ L LAD A +L + + L + + G + + I+ ++ ITG N
Sbjct: 72 SNVNLHLADSA-VLKFTTD--YNLFDTVRTRLEGIDCYN--ISPLIYAYEEVNIAITG-N 125
Query: 190 GTINGQG---------------QAWWKKYRQKLL-------------------NNTRGPL 215
G ++GQ Q K +K L ++ R
Sbjct: 126 GIMDGQADRSNWFCDERIRGVVQKDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQF 185
Query: 216 VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF---------DSCEDM 266
+ + +IL+ T+ +PFW +HP +NVTIR K+Q +SC ++
Sbjct: 186 INLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKV---KMQSHGYNNDGCDPESCNNV 242
Query: 267 VIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+IE C GDD IAIKSG D+ G + PS NI++RN ++
Sbjct: 243 LIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKD 285
>gi|332665086|ref|YP_004447874.1| glycoside hydrolase [Haliscomenobacter hydrossis DSM 1100]
gi|332333900|gb|AEE51001.1| glycoside hydrolase family 28 [Haliscomenobacter hydrossis DSM
1100]
Length = 532
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 47/256 (18%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
+ +T FG + DG+T N A Q+A I K+ K GGG++ +PPG +++ L + +TL
Sbjct: 28 SLKITSFGAIADGITNNVVAIQKA---IDKVSKSGGGKVIIPPGNFMSGTVFLKTGVTLH 84
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
L A +L N + + P + + +N + I+G G I+GQ
Sbjct: 85 LELGARLLGPTNRNDYAKVADRP--------------AVVMAENQHHIGISGQ-GIIDGQ 129
Query: 196 GQAW----WKKYRQ-KLLNNT---------RGPLVQIMWSSDILISNITLRDSPFWTLHP 241
GQ +KK R +++ +T R ++ SDI IS ITL+++ W
Sbjct: 130 GQELMLDIFKKLRSGEMVQDTIWKVKRPGGRTMVLNFKSCSDIHISGITLKNASDWVQDY 189
Query: 242 YDCKNVTIRNAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAY 293
+C N+ I + + + DS +++ I +C+I+ DDAI +KS G
Sbjct: 190 RECSNLIIDGITVQSTAYWNNDGLDITDS-KNVRISNCFINSTDDAICLKSENPALGCE- 247
Query: 294 GRPSMNILIRNLVVRS 309
N+ I N +RS
Sbjct: 248 -----NVYIENCTLRS 258
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 39/267 (14%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L A DFG GDGVT NT A QRA+ A + L + PG +LT L S
Sbjct: 38 LSTATVRAEDFGARGDGVTRNTAALQRAIEAAAAQNAT----LVLAPGTYLTGSLFLKSG 93
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
M L L ++ + + +P+M + G E P + ++ + DV I G G
Sbjct: 94 MALRLDKGVTLVGEQTIESYPVMQTRIA---GIELPWP--SALLNVYDQTDVRIYGE-GK 147
Query: 192 INGQGQAWWKKYRQ-------------KLLNNTRGPLVQIMWSSDILISN------ITLR 232
I+G G+ +W +++ + R L+QI SS I + N + L
Sbjct: 148 IDGNGKVFWDRFQSIRADYEARGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLA 207
Query: 233 DSPFWTL-----HPYDCKNVTIRNAFISKIQL-----FDSCEDMVIEDCYISVGDDAIAI 282
S FWT+ H +T+RN K DS +++E I DDA+ +
Sbjct: 208 RSGFWTVQIVYSHDVKVSGITVRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCL 267
Query: 283 KSGWDQYGIAYGRPSMNILIRNLVVRS 309
K+G D G+ RP+ N++IRN +R+
Sbjct: 268 KAGRDADGLRVNRPTENVVIRNSTIRA 294
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 91 LNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKY 150
L TE+ Q I + +GGG++ V PG T L SH+ L + A + + +
Sbjct: 24 LVTESLQ---ARIDEAAARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPAL 80
Query: 151 WPLMPPLPS--YGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLL 208
+P P+ + G H P ++ + + V ITG G WW+ +R L
Sbjct: 81 YP---PVEARWEGAPATIHQP----CLYAHDAEHVAITGDGVIDGGG-GPWWEAFRAGTL 132
Query: 209 NNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLF-------- 260
+ R LV + + + + ++TLR SP WT+HP C +V +R+ I
Sbjct: 133 AHPRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDP 192
Query: 261 DSCEDMVIEDCYISVGDDAIAIKSGWD 287
+SC ++ I C+I VGDD IA+K+G +
Sbjct: 193 ESCRNVRISGCHIDVGDDCIALKAGTE 219
>gi|359413926|ref|ZP_09206391.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
gi|357172810|gb|EHJ00985.1| glycoside hydrolase family 28 [Clostridium sp. DL-VIII]
Length = 448
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 27/251 (10%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ ++G DG+T N EA Q+ I + GGG++ +P G +L+ L S++ L L
Sbjct: 4 YNILNYGAKPDGITNNREAIQK---TIDECTAGGGGRVIIPKGNFLSGTLILKSNIDLHL 60
Query: 137 ADDAEI-LAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
A + +I E L+ ++ + G G F+ + +++ ITG GTI GQ
Sbjct: 61 ESGAYLSCSIHQED---LIDFAKNFEDDNKDIGWEGGCFLCAFHEENISITGQ-GTIYGQ 116
Query: 196 GQAWWKK------YRQKLLN---NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKN 246
G + + + LN R ++++ +IT +D+ FWTLH C++
Sbjct: 117 GDKIFYDDNADGGFHECPLNIRTELRPRTTFFENIKNLVVKDITFKDAAFWTLHMAGCEH 176
Query: 247 VTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSM 298
V + I Q D+C+D+VI +C I GDDAI IK+ + YG
Sbjct: 177 VIVNGIKILNDQRGANNDGIDPDTCKDVVISNCIIKAGDDAIVIKNS-EPMAAKYG-SCE 234
Query: 299 NILIRNLVVRS 309
NI+I N ++ S
Sbjct: 235 NIVINNCILYS 245
>gi|261879890|ref|ZP_06006317.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333401|gb|EFA44187.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 439
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 129/255 (50%), Gaps = 35/255 (13%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSH 131
+P +N+ D+G VG+GV + A QR AI + GGG++ P GR +L P L S+
Sbjct: 21 QPKIYNVVDYGAVGNGVADDAAAIQR---AIDQCSADGGGRVYFPVGRTFLAGPVELKSN 77
Query: 132 MTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGT 191
+ L+L +A + A +E+ + L + G G ++ ++++++ I G GT
Sbjct: 78 IELYLDVNATLKANPDERIYQLSAFGKNRGEGM--------MWLWAKDIENLRIGGR-GT 128
Query: 192 INGQGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC 244
I+G G ++ + Y K + R ++ ++ ++ IS++T+++ +WT+H C
Sbjct: 129 IHGNGVSFMGRELHDSYELKPTTTFDPRPHVLTLIGVRNLRISDLTIKEGAYWTVHLIGC 188
Query: 245 KNVTIRN-AFISKIQL-------FDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYG 294
++ I + ++ +++ D + I +CYI+ GDD I +K+ + +YG
Sbjct: 189 EDAVIEGISLLNNLKIRNGDGIDIDHSRHVRISNCYITSGDDCICLKNRREYQEYG---- 244
Query: 295 RPSMNILIRNLVVRS 309
P+ +I + N + S
Sbjct: 245 -PTHDITVTNCTMTS 258
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 93 TEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWP 152
T+A Q+A I K+ + GGG++ +P G W T L S++ L L + AE+ N +
Sbjct: 78 TKAIQKA---IDKVSRDGGGKVVIPAGIWKTGRIELKSNVNLHLEEGAELHFSGNINDY- 133
Query: 153 LMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI---------NGQGQAWWKKY 203
+P + + G E + G+ ++ N +++ +TGH + Q +KY
Sbjct: 134 -LPVVLTRFEGVEVYS--LGALVYANNQENIALTGHGKLVAPTTDCEIWKRQCYESIEKY 190
Query: 204 -------RQKLLNNTRG-----PL-VQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
++++ + +G PL V ++LI +TL S FW + P C V IR
Sbjct: 191 VEQYPDVKERIADGKKGRSVFLPLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVIIR 250
Query: 251 NAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
A + I + +S +++IE C + GDD +KSG + GI +PS NI+I
Sbjct: 251 GATVDSHGHGRTDGIDI-ESTRNVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVI 309
Query: 303 RNLVVR 308
R + +
Sbjct: 310 RYCLAK 315
>gi|404406296|ref|ZP_10997880.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 635
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 24/245 (9%)
Query: 55 GGFSFLRWGVASRPIPR----LRPAAF--NLTDFGGVGDGVTLNTEAFQRAVYAISKLGK 108
G S + VA RP+ +RPA F ++ + G VGDG T+NT Q A+ S +
Sbjct: 152 GSSSHNMYLVAVRPLGEWPETVRPAGFVVDIAEAGAVGDGATVNTAVLQAAIDKCS--AR 209
Query: 109 KGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEIL-AIENEKYWPLMPPLPSYGYGREHH 167
KGGG + V G ++T L S++TL + A + ++ ++ + PL LPS+
Sbjct: 210 KGGGTVWVRDGIYVTGTLQLKSNVTLRVEAGAILRGSVNHDDFPPLRCSLPSF------R 263
Query: 168 GPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILIS 227
G I+ + ++ I G G I+G +R + + R L++++ ++ I
Sbjct: 264 GKEDFQMIYAEKASNITICG-GGIIDGCSLFEGYPWRGRNNEHERPRLIRMVECENVAID 322
Query: 228 NITLRDSPFWTLHPYDCK-----NVTIRNAFISKIQ---LFDSCEDMVIEDCYISVGDDA 279
+TL S WT + C+ NVT+R + Q C D+V+ + S GDDA
Sbjct: 323 GVTLARSANWTQYYEACRGMRVENVTVRCYTGTNNQDGIDLSGCSDVVVRNFLCSCGDDA 382
Query: 280 IAIKS 284
I +K+
Sbjct: 383 ICLKA 387
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 76/297 (25%)
Query: 73 RPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHM 132
RP + + D + N +A RA+ IS+ KGGG + +P G W TAP + S +
Sbjct: 26 RPYCYTIED-------ASRNADAINRAINYISE---KGGGTVVIPDGIWFTAPIEIKSDV 75
Query: 133 TLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L + +A + ++ +PL+ + +Y G+E R S I +N ++ ITG G I
Sbjct: 76 ELRIEKNAILKFSKDIDQYPLI--ITNY-EGQE--CIRAKSPITAENAINIGITG-GGVI 129
Query: 193 NGQGQAW------------WKKYRQK--LLNNTRGP------------------------ 214
+G G W W+ +K + +T+G
Sbjct: 130 DGSGDMWRPIKQFKITDRQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENA 189
Query: 215 --------------LVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL- 259
+V + IL+ +T ++SP W +HP+ CKN+T+RN +S
Sbjct: 190 LEKASEYYDFYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYA 249
Query: 260 -------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+SC+ + I +C GDDAI +KSG + P ++ I + +V
Sbjct: 250 QNGDGIDVESCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNE 306
>gi|237709304|ref|ZP_04539785.1| exopolygalacturonase [Bacteroides sp. 9_1_42FAA]
gi|229456689|gb|EEO62410.1| exopolygalacturonase [Bacteroides sp. 9_1_42FAA]
Length = 436
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 33 LFTVLWLAAFASVFIWQRNAVVGGFSFLRWGVASRPIPRLRPAA-FNLTDFGGVGDGVTL 91
+FT + L ++F +++ G W ++PI + +TD+ V D L
Sbjct: 1 MFTQVLLCCVLAIF--AQDSFPDGTPVSEWFRQTKPIDMSTLGNRYCITDYEVVNDSTIL 58
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
T+ Q I K ++GGG + VP G +L+ L++ + ++ +
Sbjct: 59 QTQKIQAV---IDKAHQQGGGVIVVPQGTFLSGSLFFKPKTHLYIEKGGTLKGSDDISDF 115
Query: 152 PLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKY-------- 203
PL+ F + ++ + I+G G ING G +WK +
Sbjct: 116 PLV-----MTRMEGQTVKYFVALVNADKVDGFTISGE-GCINGNGLRYWKSFWLRTQFNP 169
Query: 204 RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK------- 256
+ ++ R L+ + S I +S + L SP+WT H Y C+N+ N I+
Sbjct: 170 KCTNMDEMRPRLIYVSNSKHIQLSGLKLMHSPYWTTHFYKCENIRFLNLHITSPNRPVGA 229
Query: 257 -----IQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
I L D C ++ I+ CY+SV DDAI++K G
Sbjct: 230 PSTDAIDL-DVCTNVHIKKCYMSVNDDAISLKGG 262
>gi|297820578|ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
gi|297324010|gb|EFH54431.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISK--LGKKGGGQLNVPPGRWLTAPFNLTSHMT 133
A ++TDFG GDG+ +T A Q + A ++ ++ P G +LTA +L S +
Sbjct: 33 ALSVTDFGATGDGINYDTSAVQSTIDACNRHYTSSSSICRVTFPSGNYLTAKLHLRSGVV 92
Query: 134 LFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTI 192
L + ++A +L E Y+P Y + N DV ITG G I
Sbjct: 93 LDVTENAVLLGGPRIEDYYPAETSSDWY-------------VVVANNATDVGITG-GGAI 138
Query: 193 NGQGQAWWKKYRQK-------------LLNNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+GQG + ++ +K L + R LV + S ++ I NITLR+ +W L
Sbjct: 139 DGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSRNVEIWNITLREPAYWCL 198
Query: 240 HPYDCKNVTIRNAFI---------SKIQLFDSCEDMVIEDCYISVGDDAIAIKS 284
H C+N ++ + I I + DS + VI C+I GDDAI K+
Sbjct: 199 HIVRCENTSVHDVSILGDFNTPNNDGIDIEDS-NNTVITRCHIDTGDDAICPKT 251
>gi|265753058|ref|ZP_06088627.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513915|ref|ZP_08793430.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423230932|ref|ZP_17217336.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|423244643|ref|ZP_17225718.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
gi|263236244|gb|EEZ21739.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345456135|gb|EEO45804.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392630052|gb|EIY24054.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|392641492|gb|EIY35268.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
Length = 470
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 41/255 (16%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTL 134
+++ FG GDG T + A QRA+ A S GGG + +P G +L P L S++ L
Sbjct: 28 TYDIIAFGAKGDGKTDDAAAIQRAINACS---AAGGGTVIIPAGHTFLCGPLQLASYVNL 84
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L ++ +LA +E + + RE+ G +I G++LK + ITG G I+G
Sbjct: 85 HLEPNSRLLANPDESIY-------TESAFRENRGEGM-MWISGKDLKQISITG-TGEIDG 135
Query: 195 QGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC--- 244
G A+ K Y K + + R ++ ++ +I +IT+R+S +WT+H C
Sbjct: 136 NGIAFMGKELDDSYELKPVTDFDPRPHVLTLINVEKTVIRDITIRNSAYWTIHLIGCYDA 195
Query: 245 --------KNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYG 294
N+ IRN I + D + + I +C+I GDD I +K+ +++YG
Sbjct: 196 LIDGISLLNNLKIRNG--DGIDV-DHSKKVRIANCFIESGDDCICLKNRREFEEYG---- 248
Query: 295 RPSMNILIRNLVVRS 309
+I++ N V+ S
Sbjct: 249 -SCEDIVVTNCVMTS 262
>gi|198274117|ref|ZP_03206649.1| hypothetical protein BACPLE_00254 [Bacteroides plebeius DSM 17135]
gi|198273195|gb|EDY97464.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 479
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 17/247 (6%)
Query: 72 LRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSH 131
L+ +N+ DFG VGDG +++EA + AI + ++GGG + VP G++ L S
Sbjct: 19 LQAKIYNVKDFGAVGDGQHIDSEAINQ---AIVQAAREGGGTIYVPAGKYACYSIRLASQ 75
Query: 132 MTLFLADDAEILAI--ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+ L+L A I+A EK + P Y H S I G NL+D+ I+G
Sbjct: 76 IHLYLEQGATIVAAFPTAEKGYDKAESNPHNSYQDFGHSHWKNSLIWGINLEDITISG-P 134
Query: 190 GTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTI 249
G I+G+G + R + N + + ++ + ++++ + L N+TI
Sbjct: 135 GKIDGKGLTREESRRDGVGNKA----ISLKECKNVTLKDLSMFRCGHFALLATGVDNLTI 190
Query: 250 RNAFISKIQ---LFDSCEDMVIEDCYISVG-DDAIAIKSGWDQYGIAYGRPSMNILIRNL 305
N + + D C+++ I C ++ DDAI +KS Y + Y + + N+ I +
Sbjct: 191 DNLKVDTNRDGFDIDCCKNVRISRCSVNTPWDDAIVLKS---SYALGYFKDTENVTISDC 247
Query: 306 VVRSMVR 312
V R
Sbjct: 248 YVSGYDR 254
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 112/258 (43%), Gaps = 45/258 (17%)
Query: 81 DFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDA 140
DFGG GD TL T A Q+A I + ++GGG + + PG WL+ P L S++TL + D
Sbjct: 31 DFGGKGDDSTLATRAIQQA---IDRCAQQGGGHVTLGPGVWLSGPIVLKSNVTLVIPDGV 87
Query: 141 EILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG-QAW 199
+ K P GR +FI ++ V I G GTI+G G QAW
Sbjct: 88 TL------KATPDTAQFVDAFLGRPTQPNE--AFILANGVRHVAIEG-GGTIDGNGAQAW 138
Query: 200 W-------------------KKYRQ-KLLNNTRGP-LVQIMWSSDILISNITLRDSPFWT 238
W KY+ L N P LV++ + I NI L +SP W
Sbjct: 139 WPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHNIRLTNSPMWN 198
Query: 239 LHPYDCKNVTIRNAFISKIQL--------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYG 290
L + +++ I + S D++I+ IS GDD IAIKSG
Sbjct: 199 LVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIKSGISA-- 256
Query: 291 IAYGRPSMNILIRNLVVR 308
G S NI I++ V+R
Sbjct: 257 -GSGVKSENIAIQDSVMR 273
>gi|423301889|ref|ZP_17279912.1| hypothetical protein HMPREF1057_03053 [Bacteroides finegoldii
CL09T03C10]
gi|408470980|gb|EKJ89512.1| hypothetical protein HMPREF1057_03053 [Bacteroides finegoldii
CL09T03C10]
Length = 436
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G V D L TE Q I + K GGG + +P G +L+ L+L
Sbjct: 47 YRITDYGVVNDSTKLQTEQIQNV---IDRAAKNGGGVIVIPKGTFLSGSLFFKPKTHLYL 103
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + ++ + + G ++ + + I+ + I+G G +NG G
Sbjct: 104 EENAVLKGSDDASDFRIQLTRME-GQTVKY----YTALINADGIDGFTISGK-GMLNGNG 157
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + ++ R ++ + ++ I I++ +SPFWT H Y C V
Sbjct: 158 FRYWKAFWLRREWNPNCTNMDEQRPRIIYLSNCKNVQIEGISIANSPFWTTHYYKCSYVK 217
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I+ + D C +++I++CY+SV DDA+A+K G
Sbjct: 218 LLNLHITSPRKPMEAPSTDAVDLDVCNNVLIKNCYMSVCDDAVALKGG 265
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 44/273 (16%)
Query: 63 GVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWL 122
GV +R P R FN DFG D L+TEA QRAV A S+ GGG + + G +
Sbjct: 39 GVGARTFPEGR--VFNAEDFGLEQDTTKLSTEAIQRAVDACSR---AGGGIVAIKKGYYR 93
Query: 123 TAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKD 182
T + + L L A ++A E+ +P + G E P I+ + +++
Sbjct: 94 TGALFIKGGVNLRLEKGAVLIASEDFGDYPERMTRIA---GIEMQWP--AGVINFEGVQN 148
Query: 183 VVITGHNGTINGQGQAWWKKY---RQKLL----------NNTRGPLVQIMWSSDILISNI 229
+TG GTI+ +G+ W KY R+ + + R + + S D+ +
Sbjct: 149 AALTGE-GTIDCRGKFCWDKYWTMRKDYVKRGLRWIVDYDAKRIRGIVVSQSKDVTLKGF 207
Query: 230 TLRDSPFWTLHPYDCKNVTIRNAFISKIQL---------------FDSCEDMVIEDCYIS 274
TL + FW C+ V + + I++ DS D++IE+ YI
Sbjct: 208 TLLRTGFWG-----CQLVYSGHCTVDGIRINNNLGGHGPSTDGIDVDSSSDILIENAYID 262
Query: 275 VGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVV 307
DD I +K+G D G+ RP+ ++IRN +
Sbjct: 263 CNDDNICLKAGRDADGLRVNRPTERVVIRNCIA 295
>gi|237711639|ref|ZP_04542120.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|229454334|gb|EEO60055.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
Length = 457
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 41/255 (16%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTL 134
+++ FG GDG T + A QRA+ A S GGG + +P G +L P L S++ L
Sbjct: 15 TYDIIAFGAKGDGKTDDAAAIQRAINACS---AAGGGTVIIPAGHTFLCGPLQLASYVNL 71
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L ++ +LA +E + + RE+ G +I G++LK + ITG G I+G
Sbjct: 72 HLEPNSRLLANPDESIY-------TESAFRENRGEGM-MWISGKDLKQISITG-TGEIDG 122
Query: 195 QGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC--- 244
G A+ K Y K + + R ++ ++ +I +IT+R+S +WT+H C
Sbjct: 123 NGIAFMGKELDDSYELKPVTDFDPRPHVLTLINVEKTVIRDITIRNSAYWTIHLIGCYDA 182
Query: 245 --------KNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYG 294
N+ IRN I + D + + I +C+I GDD I +K+ +++YG
Sbjct: 183 LIDGISLLNNLKIRNG--DGIDV-DHSKKVRIANCFIESGDDCICLKNRREFEEYG---- 235
Query: 295 RPSMNILIRNLVVRS 309
+I++ N V+ S
Sbjct: 236 -SCEDIVVTNCVMTS 249
>gi|271501832|ref|YP_003334858.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
gi|270345387|gb|ACZ78152.1| glycoside hydrolase family 28 [Dickeya dadantii Ech586]
Length = 444
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 23/239 (9%)
Query: 85 VGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILA 144
DG+T +T FQ+A ++ L +GGG L V GR+L + S+ L L + AE++A
Sbjct: 11 AADGITPDTARFQQA---LNDLDIQGGGTLVVESGRYLLGGLRIPSNCCLQLDEGAELIA 67
Query: 145 IENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYR 204
+ L +F++ + +++ + G G I G A++
Sbjct: 68 SACYDDFAHTTTLSVAELSDR-------AFLYARQQRNITLCG-KGKITGSADAYFSAQP 119
Query: 205 Q----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQL- 259
+L R +V + I I +IT+ +P WT+H C+ V + +
Sbjct: 120 DEQGYRLPAQHRPRIVVLEDCEQITIQDITIEHAPMWTIHLVSCRQVNVERLTVDNDMTM 179
Query: 260 -------FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRSMV 311
DSC+D+++ DC++S DDA+ IK+ + Y M++ L RS
Sbjct: 180 ANTDALNLDSCQDVIVHDCHLSAADDALCIKTTAKPPAMQYKAQRMSVSHCRLRSRSCA 238
>gi|212695340|ref|ZP_03303468.1| hypothetical protein BACDOR_04887 [Bacteroides dorei DSM 17855]
gi|212662069|gb|EEB22643.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 470
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 41/255 (16%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGR-WLTAPFNLTSHMTL 134
+++ FG GDG T + A QRA+ A S GGG + +P G +L P L S++ L
Sbjct: 28 TYDIIAFGAKGDGKTDDAAAIQRAINACS---AAGGGTVIIPAGHTFLCGPLQLASYVNL 84
Query: 135 FLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTING 194
L ++ +LA +E + + RE+ G +I G++LK + ITG G I+G
Sbjct: 85 HLEPNSRLLANPDESIY-------TESAFRENRGEGM-MWISGKDLKQISITG-TGEIDG 135
Query: 195 QGQAWWKK-----YRQKLLN--NTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDC--- 244
G A+ K Y K + + R ++ ++ +I +IT+R+S +WT+H C
Sbjct: 136 NGIAFMGKELDDSYELKPVTDFDPRPHVLTLINVEKTVIRDITIRNSAYWTVHLIGCYDA 195
Query: 245 --------KNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKS--GWDQYGIAYG 294
N+ IRN I + D + + I +C+I GDD I +K+ +++YG
Sbjct: 196 LIDGISLLNNLKIRNG--DGIDV-DHSKKVRIANCFIESGDDCICLKNRREFEEYG---- 248
Query: 295 RPSMNILIRNLVVRS 309
+I++ N V+ S
Sbjct: 249 -SCEDIVVTNCVMTS 262
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 118/289 (40%), Gaps = 65/289 (22%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR P + A + G V D L+T A Q+A I GGG + +
Sbjct: 40 LSWADSVGSRQEP-INHIALSANSLGAVADSTVLSTTAIQKA---IDSCAVSGGGTVTLQ 95
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA P + HH P F S + G
Sbjct: 96 PGYYQTGALFIKSGVNLHLDKGVTLLA---------SPQI--------HHYPEFRSRVAG 138
Query: 178 QNL------------KDVVITGHNGTINGQGQAWWKKY---RQKL------------LNN 210
+ K+ I+G GT++ +G+ +W KY R++
Sbjct: 139 IEMTWPAAVINIIDEKNASISGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKR 197
Query: 211 TRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-----------IQL 259
RG LV+ SSDI +S TL + FW + TI I+ I +
Sbjct: 198 VRGILVE--RSSDITLSGFTLMRTGFWGCQILYSDHCTINGLTINNNIGGHGPSTDGIDI 255
Query: 260 FDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
DS +++E+C I DD I IKSG D G+ RP+ I+IRN + R
Sbjct: 256 -DSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIAR 303
>gi|325300385|ref|YP_004260302.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319938|gb|ADY37829.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 513
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
++T G VGDG TLNT + Q A I L +GGG L P GR+LT L S +TL L
Sbjct: 25 LDVTRHGAVGDGKTLNTGSLQGA---IDGLHARGGGVLRFPAGRYLTGSLRLKSGVTLHL 81
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
+ A +L + +P +H + I+ +++ ITG G ++GQG
Sbjct: 82 EEGAVLLGSTSPYDYPKFSTEKKLKVNNDHFDQ---ALIYADGAENIGITG-GGCVDGQG 137
Query: 197 QAW-----------------WKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTL 239
+ + YR++ NTR L+ + ++ I ++ R S W L
Sbjct: 138 RELALTIDSLHHTGELVDPHYNTYRKR--PNTRPKLLFVRGCRNVRIHRVSFRSSAAWGL 195
Query: 240 HPYDCKNVTIRNAFISK--------IQLFDSCEDMVIEDCYISVGDDAIAIKS 284
C +VT+ + I I + D C+D+ I C ++ DD I +KS
Sbjct: 196 SFSLCTDVTLDSLHIENRAYWNNDGIDISD-CKDVRIAHCDVNSADDGICLKS 247
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + + +G GG + +
Sbjct: 45 LSWADSVGSRQMPG-NHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG---GGTVVLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA Y P S G E P + I+
Sbjct: 101 PGYYQTGALFIKSGVNLQLDKGVTLLA---SPYIHHYPEFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W KY R++ RG L++ SS
Sbjct: 156 VNEKNASVSGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSS 212
Query: 223 DILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDC 271
DI + TL + FW L+ C +TI N I + SC ++++E+C
Sbjct: 213 DITLKGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILVENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ N++IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR 308
>gi|427388349|ref|ZP_18884232.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
gi|425724932|gb|EKU87806.1| hypothetical protein HMPREF9447_05265 [Bacteroides oleiciplenus YIT
12058]
Length = 475
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 68 PIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFN 127
P + A N+T FG DGVT++TEA Q+A+ S GG++ +P G ++T
Sbjct: 13 PFTYVHGADHNITSFGAKADGVTVSTEAIQKAIDESS----AKGGRVIIPTGDFVTGTLF 68
Query: 128 LTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPR--FGSFIHGQNLKDVVI 185
L + TL + +A +L + + P G G + S I N+ ++ I
Sbjct: 69 LKDNTTLVIEKNARLLGSKK------LSDYPKTTVGFRFFGDTWVYQSLIIAHNVNNITI 122
Query: 186 TGHNGTINGQGQAWWKKYRQKLLNNTRGP-LVQIMWSSDILISNITLRDSPFWTLHPYDC 244
G GTI+GQG+A+ + K P L I +I + NI LR S W C
Sbjct: 123 EGE-GTIDGQGEAFPVTTKVKPDRYRDRPYLFWIADCKNITVKNIELRSSAMWLQSYIRC 181
Query: 245 KNVTIRNAFI-------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPS 297
+ + I + + + D C+D+VI + DD I KS D R S
Sbjct: 182 EKLRIDGIRVFNHANKNNDLMDIDGCKDVVITNVVGDADDDGITFKSTTD-------RIS 234
Query: 298 MNILIRNLVVRS 309
NI++ N ++ S
Sbjct: 235 ENIVVSNCILSS 246
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 37/277 (13%)
Query: 57 FSFLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNV 116
F + G S P+ + A +N+TD+G GD +++NT A Q+A+ A + GGG +
Sbjct: 30 FWMKKVGAMSYPVQQ---AVYNVTDYGAKGDALSMNTMAIQKAIDAAE---QAGGGIVVF 83
Query: 117 PPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIH 176
PG +LT + +++ L ++ ++ ++ + + + G E P + I+
Sbjct: 84 HPGIYLTGSLFVGNNVNLHISKGVTLIGSQDIGDYKKIDTRVA---GIEMEWPS--ALIN 138
Query: 177 GQNLKDVVITGHNGTINGQGQAWWKKY---RQKL----------LNNTRGPLVQIMWSSD 223
K+ I+G +G ING+G+ +W KY R+ + R + I +
Sbjct: 139 IIGKKNAAISG-DGVINGRGKVFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECEN 197
Query: 224 ILISNITLRDSPFWTLHPYDCKNVTIRNAFISK-----------IQLFDSCEDMVIEDCY 272
+ + +I L FW+LH K++TI IS I + DS E +++++
Sbjct: 198 VTVRDIVLYQPGFWSLHILYSKHITIDGIIISNNIEGHGPSTDGIDI-DSSEYILVQNAN 256
Query: 273 ISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
I+ DD +K+G D G+ RP ++IR+ V S
Sbjct: 257 INCNDDNFCLKAGRDSDGLRVNRPCQYVVIRDCVAGS 293
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A I GGG + +
Sbjct: 45 LSWADSVGSRQMPG-NHVILSANSFGAVADSTVLSTEAIQKA---IDSCAVSGGGTVVLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA + ++P S G E P + I+
Sbjct: 101 PGYYQTGALFIKSGVNLQLDKGVTLLASPSIHHYP---EFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ I+G GT++ +G+ +W KY R++ RG L++ SS
Sbjct: 156 VNEKNASISGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSS 212
Query: 223 DILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDC 271
DI + TL + FW L+ C +TI N I + SC ++++E+C
Sbjct: 213 DITLKGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILVENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ N++IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR 308
>gi|260642181|ref|ZP_05414769.2| galacturan 1,4-alpha-galacturonidase [Bacteroides finegoldii DSM
17565]
gi|260623446|gb|EEX46317.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 470
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+ +TD+G V D L TE Q I + K GGG + +P G +L+ L+L
Sbjct: 81 YRITDYGVVNDSAKLQTEQIQNV---IDRAAKNGGGVIVIPKGTFLSGSLFFKPKTHLYL 137
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
++A + ++ + + G ++ + + I+ + I+G G +NG G
Sbjct: 138 EENAVLKGSDDAGDFRIQLTRME-GQTVKY----YTALINADGIDGFTISGK-GMLNGNG 191
Query: 197 QAWWKKY--------RQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVT 248
+WK + ++ R ++ + ++ I I++ +SPFWT H Y C V
Sbjct: 192 FRYWKAFWLRREWNPNCTNMDEQRPRIIYLSNCKNVQIEGISIANSPFWTTHYYKCSYVK 251
Query: 249 IRNAFISKIQL-----------FDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I+ + D C +++I++CY+SV DDA+A+K G
Sbjct: 252 LLNLHITSPRKPMEAPSTDAVDLDVCNNVLIKNCYMSVCDDAVALKGG 299
>gi|380693880|ref|ZP_09858739.1| exopolygalacturonase [Bacteroides faecis MAJ27]
Length = 432
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+++T +G V D + T+ Q I + GGG + VP G +L+ ++ L+L
Sbjct: 47 YSITSYGVVNDSTVVQTKKIQEV---IDLAAQNGGGVIVVPQGTFLSGSLFFKNNTHLYL 103
Query: 137 ADDAEILAIENEKYWPL-MPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQ 195
++A + ++ ++P+ M + F + ++ L I+G GT+NG
Sbjct: 104 EENAVLKGSDDISHFPVKMTRMEGQTLNY------FMALVNADGLDGFTISGK-GTLNGN 156
Query: 196 GQAWWKKY--RQKL------LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNV 247
G +WK + R+ + + R ++ + ++ I I + DSPFW+ H Y C +
Sbjct: 157 GLRYWKSFWLRRSINPDCTNMEEMRPRIIYMSNCKNVQIEGIRIMDSPFWSTHFYKCSFL 216
Query: 248 TIRNAFISK------------IQLFDSCEDMVIEDCYISVGDDAIAIKSG 285
+ N I+ + L D C +++I++CY+SV DDA+A+K G
Sbjct: 217 KLLNLRITSPASPVKAPSTDAVDL-DVCNNVLIKNCYMSVNDDAVALKGG 265
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + + +G GG + +
Sbjct: 45 LSWADSVGSRQMPG-NHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG---GGTVVLQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA + ++P S G E P + I+
Sbjct: 101 PGYYQTGALFIKSGVNLQLDKGVTLLASPSIHHYP---EFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W KY R++ RG L++ SS
Sbjct: 156 VNEKNASVSGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSS 212
Query: 223 DILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDC 271
DI + TL + FW L+ C +TI N I + SC ++++E+C
Sbjct: 213 DITLKGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILVENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ N++IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR 308
>gi|262383965|ref|ZP_06077101.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
gi|262294863|gb|EEY82795.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_33B]
Length = 446
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 59 FLRWGVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPP 118
F+R G AS + +N+ DFG GDG+T NT+ R + A S +GGG + +P
Sbjct: 23 FMRIGWASND-----DSTYNIVDFGAKGDGITDNTQFINRTIEACS---LRGGGTVIIPE 74
Query: 119 GRWLTAPFNLTSHMTLFLADDAEILAIEN-EKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
G +LT L S + FL +A + I N EKY + P Y + + + G
Sbjct: 75 GTFLTGSILLKSKVNFFLESNAVVKGINNLEKYRSISDLNPDEAYYKVKPRNWNKALLLG 134
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMW-SSDILISNITLRDSPF 236
++DV ITG G I+G KK + + RGP + + S I IS + LR +
Sbjct: 135 DQVEDVSITGE-GVIDG-AHIQDKKGEEGM----RGPHILFLSRSKGIKISGVKLRRASN 188
Query: 237 WTLHPYDCKNVTIRNAFISK----IQLFDSCEDMVIEDCYISVGDDAIA 281
+ YD + + N + + I + +D+ I +C GDDA+A
Sbjct: 189 YAFMSYDIERASFDNLLVEEGWDGIHIRGG-KDIRIRNCCFYTGDDAVA 236
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 26/245 (10%)
Query: 82 FGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAE 141
+G V DG T NT Q A+ K GG + VP GR+ TA + S+ TL+L A
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 142 ILAIENEKYWPLMPP-LPSYGYGREHH------GP--RFGSFIHGQNLKDVVITGHNGTI 192
+L + ++P++P LPS E++ P F ++ + DVV+TG GT+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 193 NGQGQ--AWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHP-----YDCK 245
+ Q WW + K + R V + S ++ + IT+++S WT+HP D
Sbjct: 201 DCDAQNGDWWVNPKVKRI-AWRPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVKHLDLL 259
Query: 246 NVTIRNAFIS-KIQLFD--SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILI 302
N I N + + D SCE + I I VGDD IA+K+ G+ R + +I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVI 319
Query: 303 RNLVV 307
RN ++
Sbjct: 320 RNCLL 324
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 39 LAAFASVFIWQRNAVVGGFSFLRW--GVASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAF 96
+ F SV + A W V ++ P ++ +N+TD+G GD + +NT A
Sbjct: 11 IGVFLSVISFNVTAQTANIPDFPWMKEVGAKTFP-VQQTVYNVTDYGAKGDALEMNTTAI 69
Query: 97 QRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPP 156
Q+A+ A + GGG + PG +LT + +++ + ++ ++ +
Sbjct: 70 QKAIDAAE---QAGGGIVTFSPGIYLTGALFVGNNVNFNIPKGTTLIGSQDIDDY---KK 123
Query: 157 LPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKKYRQKL--------- 207
+ + G E + P I G+ K+ I+G +G ING+G+ +W KYR
Sbjct: 124 IDTRVAGVEMNWPSALVNIIGK--KNAAISG-DGVINGRGKVFWDKYRSMRKEYDPKGLR 180
Query: 208 ----LNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISK------- 256
+ R + I ++ + NI L FW+LH K VT+ IS
Sbjct: 181 WIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYSKYVTVDGIIISNNIEGRGP 240
Query: 257 ----IQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLV 306
I + DS E +++++ I+ DD +K+G D G+ RP ++IR+ +
Sbjct: 241 STDGIDI-DSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVNRPCRYVVIRDCI 293
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 92 NTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAIENEKYW 151
N +A Q A+ + GG L + PGRW P L S MTL LA+ AE+ + + W
Sbjct: 108 NADALQAAIADLPV-----GGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSW 162
Query: 152 PLMPPLPSYGY--GREHHGPR--FGSFIHGQNLKDVVITGHNGTINGQGQA--WWKKYRQ 205
+ P + G+ G P F + +H + +V+ G G ++G G A WW ++
Sbjct: 163 SVFPARDNAGHLLGSWEGEPAACFAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGWAKE 221
Query: 206 KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFISKIQLFDS--- 262
R + ++ SD+ + T+R++P W +HP C + A +S DS
Sbjct: 222 TRDGARRARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVA--ACLSIEAPHDSPNT 279
Query: 263 -------CEDMVIEDCYISVGDDAIAIKSG 285
++ +E +VGDD IAIK+G
Sbjct: 280 DGFNPEGSSEIRVEGVRFTVGDDCIAIKAG 309
>gi|116623081|ref|YP_825237.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226243|gb|ABJ84952.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 473
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 36/249 (14%)
Query: 71 RLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPG-RWLTAPFNLT 129
R + F++ D+G GDGVTL+T A QRA+ + GK G Q+ V G ++L L
Sbjct: 36 RAQTKIFDVRDYGAKGDGVTLDTAAIQRAIDEAAAEGK--GAQVLVRGGKKYLIGTLELK 93
Query: 130 SHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHN 189
+ LADDAE++ + + R + I + + ITG
Sbjct: 94 GAIDFHLADDAELVVTADPAQY------------------RGAAVIAATGAEGLRITG-T 134
Query: 190 GTINGQGQAWWKKYRQK----LLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCK 245
G ING+ + + Y Q L R + + + + I+ ++P W LH C+
Sbjct: 135 GNINGRAREFMTGYDQPGEWWLPKTFRPKMFVLTACKGLEVHGISFSEAPEWGLHMVGCE 194
Query: 246 NVTIRNAFISKIQLF--------DSCEDMVIEDCYISVGDDAIAIKSGWDQ--YGIAYGR 295
+V + I + D C D+ I++C I GDDAI +KS + +G G
Sbjct: 195 HVLVDGLRIRNLLDVPNCDGIDPDHCRDVEIKNCDIVCGDDAIVVKSTRQERDFGACSGI 254
Query: 296 PSMNILIRN 304
+ LI+
Sbjct: 255 RVHDCLIQT 263
>gi|206578536|ref|YP_002237168.1| polygalacturonase family protein [Klebsiella pneumoniae 342]
gi|206567594|gb|ACI09370.1| polygalacturonase family protein [Klebsiella pneumoniae 342]
Length = 446
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 86 GDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLADDAEILAI 145
DGVT +T FQ+A + +L + GGG L V GR+ + S+ L+L+ AE++
Sbjct: 12 ADGVTPDTALFQQA---LDELAEAGGGTLVVDHGRYALGGLRIGSNTCLWLSPGAELIVS 68
Query: 146 ENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQAWWKK--- 202
EN + L +F++ + ++V I G G I G W+ +
Sbjct: 69 ENGDDFTQAVALSQAECSHR-------AFLYALDAQNVSICG-GGEIYGSADGWFSRDVD 120
Query: 203 ---YRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIRNAFI----- 254
YRQ + R ++ + + + NIT+R +P WT+H C VTI +
Sbjct: 121 AMGYRQPVKRRPR--IILLENCRGVRLENITVRHAPMWTIHLVSCIGVTINGITVDNDLT 178
Query: 255 ---SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVRS 309
+ DSC+ + I + Y S DDAI +K+ I RP + I N +RS
Sbjct: 179 MANTDALDIDSCQQVHIANSYFSAADDAICLKTTAKPAHIQ--RPLRQVTIVNCTLRS 234
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 22/245 (8%)
Query: 76 AFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLF 135
N+ F GDG+T +T A Q A+ + G++ +P G + T L S++TL
Sbjct: 83 CLNVKHFNAKGDGITDDTLAIQAAIMSCPD-----DGRVFIPKGTYATKTIFLKSNLTLE 137
Query: 136 LADDAEILAIENEKYWPLMPPLPSYGYGREHH------GP--RFGSFIHGQNLKDVVITG 187
L A +L + + ++P E++ P F + I G N+ +V + G
Sbjct: 138 LEKGATLLYSASFESGAILPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNLIG 197
Query: 188 HNGTINGQGQAWWKKYRQKLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPY----- 242
G ++G G W + + R L QI+ S + + ITL++SP WT+HP
Sbjct: 198 E-GVLDGNGSIGWWDFPKVRNVAWRPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDDL 256
Query: 243 ---DCKNVTIRNAFISKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
D K + +++ + +SC ++I + SVGDD IAIKSG G R S
Sbjct: 257 KFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEY 316
Query: 300 ILIRN 304
I IRN
Sbjct: 317 ITIRN 321
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 106/266 (39%), Gaps = 48/266 (18%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
FN+ D+G DG L TEAF+ A+ A GGG + VP G++++ P L S++ L +
Sbjct: 24 FNIADYGARKDGSALATEAFRSAIQAAKA---AGGGTVYVPAGQYISGPIELVSNLVLHI 80
Query: 137 ADDAEILAIENEKYWPLMPPLPSYG--YGREHHGPRFGSFIHGQNLKDVVITGHNGTIN- 193
A + +P S G G E P I G+NL++V ITG G +
Sbjct: 81 DAGATL-------RFPATRLPFSRGRWQGIEALTPV--PLIGGRNLENVSITGR-GVLTT 130
Query: 194 ------------GQGQAWW-------------KKYRQKLLNNTRGPLVQIMWSSDILISN 228
G G W + QK + +M S ++LI
Sbjct: 131 SQPEWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISLMESKNVLIQG 190
Query: 229 ITLRDSPFWTLHPYDCKNVTIRNAFISKIQ-------LFDSCEDMVIEDCYISVGDDAIA 281
I + S W + N + + DS ++ I DCYI GDD I
Sbjct: 191 IHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDCYIDTGDDGIV 250
Query: 282 IKSGWDQYGIAYGRPSMNILIRNLVV 307
IKSG D G RP+ NI I N V
Sbjct: 251 IKSGKDADGRRVNRPAENISITNCNV 276
>gi|399024345|ref|ZP_10726385.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080582|gb|EJL71388.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 459
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 79 LTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFLAD 138
LTD G D L T+ Q I K GGG + VP G +L + L+L +
Sbjct: 56 LTDNGVKNDSAVLQTKQVQAV---IDLAAKNGGGVIIVPKGTFLISSVFFKQGTHLYLEN 112
Query: 139 DAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQGQA 198
A++ ++ +P++ G ++ F + I+ L I+G GT++G G
Sbjct: 113 GAKLKGSDDISDYPVVETRME-GQTLKY----FPALINADGLDGFTISGK-GTLDGNGLR 166
Query: 199 WWK---KYRQ-----KLLNNTRGPLVQIMWSSDILISNITLRDSPFWTLHPYDCKNVTIR 250
+WK K RQ ++ R ++ I S ++ I IT+++SPFW+ H Y + V +
Sbjct: 167 FWKAFWKRRQWNPKCTNMDEMRPRIIYISNSKNVQIEGITVKNSPFWSTHYYKSEFVKLL 226
Query: 251 NAFI-----------SKIQLFDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMN 299
N I + D+C + +I++CY+SV DDAIA+K G G + S N
Sbjct: 227 NLTILAPKEPVKAPSTDAVDIDACTNFLIKNCYMSVNDDAIALKGG---KGPKADKTSEN 283
Query: 300 ILIRNLVVRS 309
RN+++
Sbjct: 284 GENRNIIIED 293
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 41/277 (14%)
Query: 60 LRWG--VASRPIPRLRPAAFNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVP 117
L W V SR +P + FG V D L+TEA Q+A+ + + +G GG +
Sbjct: 45 LSWADSVGSRQMPG-NHVILSANSFGAVADSTVLSTEAIQKAIDSCAVIG---GGTVVFQ 100
Query: 118 PGRWLTAPFNLTSHMTLFLADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHG 177
PG + T + S + L L +LA Y P S G E P + I+
Sbjct: 101 PGYYQTGALFIKSGVNLQLDKGVTLLA---SPYIHHYPEFRSRIAGIEMTWP--AAVINI 155
Query: 178 QNLKDVVITGHNGTINGQGQAWWKKY---RQKL------------LNNTRGPLVQIMWSS 222
N K+ ++G GT++ +G+ +W KY R++ RG L++ SS
Sbjct: 156 VNEKNASVSGE-GTLDCRGKVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIE--RSS 212
Query: 223 DILISNITLRDSPFW---TLHPYDC--KNVTIRNAF------ISKIQLFDSCEDMVIEDC 271
DI + TL + FW L+ C +TI N I + SC ++++E+C
Sbjct: 213 DITLKGFTLMRTGFWGCQILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSC-NILVENC 271
Query: 272 YISVGDDAIAIKSGWDQYGIAYGRPSMNILIRNLVVR 308
+ DD I IKSG D G+ P+ N++IRN + R
Sbjct: 272 DVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIAR 308
>gi|160881342|ref|YP_001560310.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160430008|gb|ABX43571.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 491
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 31/252 (12%)
Query: 77 FNLTDFGGVGDGVTLNTEAFQRAVYAISKLGKKGGGQLNVPPGRWLTAPFNLTSHMTLFL 136
+N+ D+G V DGVT N Q+A+ GGQ+ VP G +L+ L S++ L
Sbjct: 50 YNILDYGAVADGVTNNAATIQKAI----DEATIHGGQVVVPAGNYLSGTIILKSNIDFHL 105
Query: 137 ADDAEILAIENEKYWPLMPPLPSYGYGREHHGPRFGSFIHGQNLKDVVITGHNGTINGQG 196
A + I + K ++ + + G G FI + +++ I+G GTI GQG
Sbjct: 106 EMGA--VLISSLKEEDILDFAKLFEDDNQTTGWDGGCFIFACHEENITISGQ-GTIYGQG 162
Query: 197 QAWW-------KKYRQKLLNNTRGPLVQIMWS-SDILISNITLRDSPFWTLHPYDCKNVT 248
+ + L + P + +++ + +IT+RD+ FWTLH C++V
Sbjct: 163 DKVFFDDNADNGAHECPLNVSAFRPRTTFLEDVTNLTVKDITIRDAAFWTLHMAGCRHVL 222
Query: 249 IRN-AFISKIQLF-------DSCEDMVIEDCYISVGDDAIAIKSG---WDQYGIAYGRPS 297
+++ ++ I+ D C+D++I C + GDDAI +K+ +YG
Sbjct: 223 VKDIKILNDIRGANNDGIDPDCCQDVMISGCLVKTGDDAIVVKATKPMSQKYG-----AC 277
Query: 298 MNILIRNLVVRS 309
NI+I N ++ S
Sbjct: 278 ENIVINNCILYS 289
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,341,091,848
Number of Sequences: 23463169
Number of extensions: 233202754
Number of successful extensions: 588261
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 1468
Number of HSP's that attempted gapping in prelim test: 582329
Number of HSP's gapped (non-prelim): 3505
length of query: 312
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 170
effective length of database: 9,027,425,369
effective search space: 1534662312730
effective search space used: 1534662312730
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.9 bits)