BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021451
         (312 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2WQK|A Chain A, Crystal Structure Of Sure Protein From Aquifex Aeolicus
 pdb|2WQK|B Chain B, Crystal Structure Of Sure Protein From Aquifex Aeolicus
          Length = 251

 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 13/197 (6%)

Query: 15  PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF 74
           PT ++ NDDG  +PG+ +L   L S  R  V V APD   S V HS+T+  P+  R  D 
Sbjct: 2   PTFLLVNDDGYFSPGINALREALKSLGR--VVVVAPDRNLSGVGHSLTFTEPLKMRKIDT 59

Query: 75  DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFF 134
           D  T   + GTPADC  LG    L    PDLV+SGIN G N G  + YSGTV+GA E   
Sbjct: 60  DFYTV--IDGTPADCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRI 117

Query: 135 HGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DI 193
            G+PS++ S     G+ N+  +   A+ C+ I+  +L    N+  PE  +LN+++P    
Sbjct: 118 LGIPSIAFS---AFGRENIM-FEEIAKVCVDIVKKVL----NEGIPEDTYLNVNIPNLRY 169

Query: 194 PNNKGYKLTKQGTSIFK 210
              KG K+T+QG   +K
Sbjct: 170 EEIKGIKVTRQGKRAYK 186


>pdb|2V4O|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|B Chain B, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|C Chain C, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
 pdb|2V4O|D Chain D, Crystal Structure Of Salmonella Typhimurium Sure At 2.75
           Angstrom Resolution In Monoclinic Form
          Length = 267

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 45/268 (16%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDG 76
           I+++NDDG+ APG+++L + L       VQV APD  +S  S+S+T     S R   FD 
Sbjct: 17  ILLSNDDGVHAPGIQTLAKAL--REFADVQVVAPDRNRSGASNSLTLES--SLRTFTFDN 72

Query: 77  VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHG 136
                  GTP DC  LGV+  + P  PD+V+SGIN G N G  V+YSGTVA A E    G
Sbjct: 73  GDIAVQMGTPTDCVYLGVNALMRPR-PDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLG 131

Query: 137 VPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIP-- 194
            P++++S +   G  + +  T AA  C     A+L  +  +       LN+++P D+P  
Sbjct: 132 FPALAVSLN---GYQHYD--TAAAVTC-----ALLRGLSREPLRTGRILNVNVP-DLPLA 180

Query: 195 NNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDLLFR 254
             KG ++T+ G+                           D  +  E     P    L + 
Sbjct: 181 QVKGIRVTRCGSR-----------------------HPADKVIPQE----DPRGNTLYWI 213

Query: 255 REVRGAHIADPDTDWQFLREGYITVTPI 282
                 + A PDTD+  + EGY++VTP+
Sbjct: 214 GPPGDKYDAGPDTDFAAVDEGYVSVTPL 241


>pdb|2V4N|A Chain A, Crystal Structure Of Salmonella Typhimurium Sure At 1.7
           Angstrom Resolution In Orthorhombic Form
          Length = 254

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 45/268 (16%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDG 76
           I+++NDDG+ APG+++L + L       VQV APD  +S  S+S+T     S R   FD 
Sbjct: 4   ILLSNDDGVHAPGIQTLAKAL--REFADVQVVAPDRNRSGASNSLTLES--SLRTFTFDN 59

Query: 77  VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHG 136
                  GTP DC  LGV+  + P  PD+V+SGIN G N G  V+YSGTVA A E    G
Sbjct: 60  GDIAVQMGTPTDCVYLGVNALMRPR-PDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLG 118

Query: 137 VPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIP-- 194
            P++++S +   G  + +  T AA  C     A+L  +  +       LN+++P D+P  
Sbjct: 119 FPALAVSLN---GYQHYD--TAAAVTC-----ALLRGLSREPLRTGRILNVNVP-DLPLA 167

Query: 195 NNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLEEDLLFR 254
             KG ++T+ G+                           D  +  E     P    L + 
Sbjct: 168 QVKGIRVTRCGSR-----------------------HPADKVIPQE----DPRGNTLYWI 200

Query: 255 REVRGAHIADPDTDWQFLREGYITVTPI 282
                 + A PDTD+  + EGY++VTP+
Sbjct: 201 GPPGDKYDAGPDTDFAAVDEGYVSVTPL 228


>pdb|3TY2|A Chain A, Structure Of A 5'-Nucleotidase (Sure) From Coxiella
           Burnetii
 pdb|3TY2|B Chain B, Structure Of A 5'-Nucleotidase (Sure) From Coxiella
           Burnetii
          Length = 261

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 17/195 (8%)

Query: 14  KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPAD 73
           K  ++++NDDG+ A GL  L + L       V V APD  +S  S+S+T   P+  +  +
Sbjct: 11  KLRLLLSNDDGVYAKGLAILAKTLADLGE--VDVVAPDRNRSGASNSLTLNAPLHIKNLE 68

Query: 74  FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAF 133
              ++   V GTP DC  L ++  L P  PD V++GIN G N G  V YSGTVA A E  
Sbjct: 69  NGXIS---VEGTPTDCVHLAITGVL-PEXPDXVVAGINAGPNLGDDVWYSGTVAAAXEGR 124

Query: 134 FHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDI 193
           F G+P++++S     G      Y  AA+    ++  ++  I     P    LNI++P D+
Sbjct: 125 FLGLPALAVSL----GGELFRYYETAAK----VVYQLIQRIEKDPLPPSTILNINVP-DL 175

Query: 194 PNN--KGYKLTKQGT 206
           P    KG+++T+ GT
Sbjct: 176 PYEELKGFEVTRLGT 190


>pdb|2E69|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E69|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Sulfate
 pdb|2E6B|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6B|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Magnesium And Tungstate
 pdb|2E6C|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6C|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 Cocrystallized With
           Manganese And Amp
 pdb|2E6E|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6E|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8
 pdb|2E6G|A Chain A, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|B Chain B, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|C Chain C, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|D Chain D, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|E Chain E, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|F Chain F, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|G Chain G, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|H Chain H, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|I Chain I, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|J Chain J, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|K Chain K, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
 pdb|2E6G|L Chain L, Crystal Structure Of The Stationary Phase Survival Protein
           Sure From Thermus Thermophilus Hb8 In Complex With
           Phosphate
          Length = 244

 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 9/131 (6%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISA----RPA 72
           I+VTNDDGI +PGL +L     ++    V V APD+E+SA  H+IT  HP+ A     P 
Sbjct: 3   ILVTNDDGIYSPGLWALAEA--ASQFGEVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPL 60

Query: 73  DFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREA 132
                 AY V GTPADC +LG+   LF  V DLV+SG+N+GSN G+ + +SGTVA A++ 
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFGPV-DLVLSGVNLGSNLGHEIWHSGTVAAAKQG 117

Query: 133 FFHGVPSVSIS 143
           +  G+ + + S
Sbjct: 118 YLFGLSAAAFS 128


>pdb|1J9J|A Chain A, Crystal Structure Analysis Of Sure Protein From T.Maritima
 pdb|1J9J|B Chain B, Crystal Structure Analysis Of Sure Protein From T.Maritima
 pdb|1J9K|A Chain A, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Tungstate
 pdb|1J9K|B Chain B, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Tungstate
 pdb|1J9L|A Chain A, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Vanadate
 pdb|1J9L|B Chain B, Crystal Structure Of Sure Protein From T.Maritima In
           Complex With Vanadate
          Length = 247

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 14/189 (7%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF-D 75
           I+VTNDDGI + G+  L  +L  +  + V V APD E+SA  HSIT   P+  +     +
Sbjct: 3   ILVTNDDGIQSKGIIVLAELL--SEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISE 60

Query: 76  GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFH 135
            V AY+ +GTPADC  L  +  +   V DL++SG+N G N G  +++SGTV+GA E    
Sbjct: 61  RVVAYSTTGTPADCVKLAYNVVMDKRV-DLIVSGVNRGPNMGMDILHSGTVSGAMEGAMM 119

Query: 136 GVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPN 195
            +PS++I        S+ N  +   E     +   L E           LNI++P     
Sbjct: 120 NIPSIAI--------SSANYESPDFEGAARFLIDFLKEFDFSLLDPFTMLNINVPAG--E 169

Query: 196 NKGYKLTKQ 204
            KG++ T+Q
Sbjct: 170 IKGWRFTRQ 178


>pdb|2E6H|A Chain A, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|B Chain B, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|C Chain C, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
 pdb|2E6H|D Chain D, Crystal Structure Of E37a Mutant Of The Stationary Phase
           Survival Protein Sure From Thermus Thermophilus Hb8
           Cocrystallized With Manganese And Amp
          Length = 244

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 9/131 (6%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISA----RPA 72
           I+VTNDDGI +PGL +L     ++    V V APD+ +SA  H+IT  HP+ A     P 
Sbjct: 3   ILVTNDDGIYSPGLWALAEA--ASQFGEVFVAAPDTAQSAAGHAITIAHPVRAYPHPSPL 60

Query: 73  DFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREA 132
                 AY V GTPADC +LG+   LF  V DLV+SG+N+GSN G+ + +SGTVA A++ 
Sbjct: 61  HAPHFPAYRVRGTPADCVALGLH--LFGPV-DLVLSGVNLGSNLGHEIWHSGTVAAAKQG 117

Query: 133 FFHGVPSVSIS 143
           +  G+ + + S
Sbjct: 118 YLFGLSAAAFS 128


>pdb|1ILV|A Chain A, Crystal Structure Analysis Of The Tm107
 pdb|1ILV|B Chain B, Crystal Structure Analysis Of The Tm107
          Length = 247

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADF-D 75
           I+VTNDDGI + G+  L  +L  +  + V V APD E+SA  HSIT   P+  +     +
Sbjct: 3   ILVTNDDGIQSKGIIVLAELL--SEEHEVFVVAPDKERSATGHSITIHVPLWXKKVFISE 60

Query: 76  GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFH 135
            V AY+ +GTPADC  L  +      V DL++SG+N G N G  +++SGTV+GA E    
Sbjct: 61  RVVAYSTTGTPADCVKLAYNVVXDKRV-DLIVSGVNRGPNXGXDILHSGTVSGAXEGAXX 119

Query: 136 GVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPN 195
            +PS++I        S+ N  +   E     +   L E           LNI++P     
Sbjct: 120 NIPSIAI--------SSANYESPDFEGAARFLIDFLKEFDFSLLDPFTXLNINVPAG--E 169

Query: 196 NKGYKLTKQ 204
            KG++ T+Q
Sbjct: 170 IKGWRFTRQ 178


>pdb|1L5X|A Chain A, The 2.0-Angstrom Resolution Crystal Structure Of A
           Survival Protein E (Sure) Homolog From Pyrobaculum
           Aerophilum
 pdb|1L5X|B Chain B, The 2.0-Angstrom Resolution Crystal Structure Of A
           Survival Protein E (Sure) Homolog From Pyrobaculum
           Aerophilum
          Length = 280

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 11/131 (8%)

Query: 17  IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDG 76
           I+VTNDDG+ +PGLR L +  +S     V V AP+S KSA    IT   P+     D  G
Sbjct: 3   ILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRXYEVDLCG 60

Query: 77  VTAYAVSGTPAD---CASLGVSQALFPSVPDLVISGINMGSNCGYHVVY-SGTVAGAREA 132
             A A SGTP+D    A+ G+ +       D+V+SGIN+G N    V+  SGT+  A +A
Sbjct: 61  FRAIATSGTPSDTVYLATFGLGRKY-----DIVLSGINLGDNTSLQVILSSGTLGAAFQA 115

Query: 133 FFHGVPSVSIS 143
              G+P+++ S
Sbjct: 116 ALLGIPALAYS 126


>pdb|1XQG|A Chain A, 3.10 A Crystal Structure Of Maspin, Space Group P 4 21 2
 pdb|1XQG|B Chain B, 3.10 A Crystal Structure Of Maspin, Space Group P 4 21 2
 pdb|1XQJ|A Chain A, 3.10 A Crystal Structure Of Maspin, Space Group I 4 2 2
          Length = 389

 Score = 29.3 bits (64), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 2   ERRGIAIVNSDHKPTIMVTND--DGIDAPGLRSL 33
           E +G+A+ N  HK ++ +T D  D I+ PG R L
Sbjct: 323 ETKGVALSNVIHKVSLEITEDGGDSIEVPGARIL 356


>pdb|1XU8|A Chain A, The 2.8 A Structure Of A Tumour Suppressing Serpin
 pdb|1XU8|B Chain B, The 2.8 A Structure Of A Tumour Suppressing Serpin
          Length = 380

 Score = 28.5 bits (62), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 2   ERRGIAIVNSDHKPTIMVTND--DGIDAPGLRSL 33
           E +G+A+ N  HK  + +T D  D I+ PG R L
Sbjct: 314 ETKGVALSNVIHKVCLEITEDGGDSIEVPGARIL 347


>pdb|1WZ9|A Chain A, The 2.1 A Structure Of A Tumour Suppressing Serpin
 pdb|1WZ9|B Chain B, The 2.1 A Structure Of A Tumour Suppressing Serpin
          Length = 375

 Score = 28.5 bits (62), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 2   ERRGIAIVNSDHKPTIMVTND--DGIDAPGLRSL 33
           E +G+A+ N  HK  + +T D  D I+ PG R L
Sbjct: 309 ETKGVALSNVIHKVXLEITEDGGDSIEVPGARIL 342


>pdb|3P0L|A Chain A, Human Steroidogenic Acute Regulatory Protein
 pdb|3P0L|B Chain B, Human Steroidogenic Acute Regulatory Protein
 pdb|3P0L|C Chain C, Human Steroidogenic Acute Regulatory Protein
 pdb|3P0L|D Chain D, Human Steroidogenic Acute Regulatory Protein
          Length = 221

 Score = 27.7 bits (60), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 212 GWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTSTPLE---EDLLFRREVRG 259
           GW++ + +  G K++S +  D      +E     P+E   E+L+ R E  G
Sbjct: 32  GWKKESQQDNGDKVMSKVVPDVGKVFRLEVVVDQPMERLYEELVERMEAMG 82


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.317    0.133    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,484,324
Number of Sequences: 62578
Number of extensions: 394346
Number of successful extensions: 872
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 19
length of query: 312
length of database: 14,973,337
effective HSP length: 99
effective length of query: 213
effective length of database: 8,778,115
effective search space: 1869738495
effective search space used: 1869738495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)