BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021452
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2
Length = 399
Score = 227 bits (579), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 192/287 (66%), Gaps = 17/287 (5%)
Query: 29 FGSIADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYLTCQLFK 80
F + AD++L GKS + L+ A LM F V A + SK+ G L+L QLFK
Sbjct: 118 FANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFK 177
Query: 81 IYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSY 140
IYFK+ +HLC+ +IR+I+++ + D ++ +VTY YY GR +F+ +F A++ LS+
Sbjct: 178 IYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSF 235
Query: 141 ALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDLRLLR 200
A +C+ S+ N RMIL YL+PVK+ +G +P LL+KY+L++++ + +A+ G+L LL
Sbjct: 236 AFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLH 295
Query: 201 HALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKW 260
AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD + ALK+
Sbjct: 296 EALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLL------LKTHQLSLDAFLVALKF 349
Query: 261 LEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+++ D+D+DEV+CI+A LI+ VKGY +H+ + +V+SKQ+PFP L+
Sbjct: 350 MQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q5FWP8|PCID2_XENLA PCI domain-containing protein 2 OS=Xenopus laevis GN=pcid2 PE=2
SV=1
Length = 399
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 194/293 (66%), Gaps = 18/293 (6%)
Query: 23 LGIRLGFGSIADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYL 74
L +R+ F + AD++L GK + L+ A LM F V A + SK+ G L+L
Sbjct: 113 LDLRI-FANNADQQLVKKGKGKVGDMLEKAAEILMSCFRVCASDTRAAFEDSKKWGMLFL 171
Query: 75 TCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAA 134
QLFKIYFK+ +HLC+ +IR+I+++ EE+ +VT+ YY GR +F+ +F A
Sbjct: 172 VNQLFKIYFKISKLHLCKPLIRAIDSSNFK--EEYTMAQRVTFKYYVGRKSMFDSDFKKA 229
Query: 135 DQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRG 194
++ LS+A +C+ S+ N RMIL YL+PVK+ +G +P LL+KY+L++++ + +A+ G
Sbjct: 230 EEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIHLLKKYDLMQFAEVTKAVSEG 289
Query: 195 DLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVI 254
+L LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD
Sbjct: 290 NLLLLTEALTKHETFFIRCGIFLILEKLKIISYRNLFKKVYLL------LKTHQLSLDAF 343
Query: 255 VKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+ ALK++E+ D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 344 LVALKFMEVGDVDIDEVQCIIANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus musculus GN=Pcid2 PE=2 SV=1
Length = 399
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 194/293 (66%), Gaps = 18/293 (6%)
Query: 23 LGIRLGFGSIADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYL 74
L +R+ F + AD++L GKS + L+ A LM F V A + SK+ G L+L
Sbjct: 113 LDLRI-FANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFL 171
Query: 75 TCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAA 134
QLFKIYFK+ +HLC+ +IR+I+++ + D ++ ++TY YY GR +F+ +F A
Sbjct: 172 VNQLFKIYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRITYKYYVGRKAMFDSDFKQA 229
Query: 135 DQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRG 194
++ LS+A +C+ S+ N RMIL YL+PVK+ +G +P LL KY+L+++S + +A+ G
Sbjct: 230 EEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFSEVTKAVSEG 289
Query: 195 DLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVI 254
+L LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y++ K HQ+ LD
Sbjct: 290 NLLLLNEALAKHETFFIRCGIFLILEKLKIITYRNLFKKVYLL------LKTHQLSLDAF 343
Query: 255 VKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+ ALK++ + D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 344 LVALKFMHVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 396
>sp|Q2TBN6|PCID2_BOVIN PCI domain-containing protein 2 OS=Bos taurus GN=PCID2 PE=2 SV=1
Length = 408
Score = 207 bits (527), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 191/296 (64%), Gaps = 15/296 (5%)
Query: 23 LGIRLGFGSIADRELASNGKSP--EKLKAAGSFLMKVFGVLAG------KGSKRVGALYL 74
L +R+ F + AD++L GKS + L+ A LM F V A + SK+ G L+L
Sbjct: 113 LDLRI-FANNADQQLVKKGKSKVGDMLEKAAELLMGCFRVCASDTRAGIEDSKKRGMLFL 171
Query: 75 TCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAA 134
QLFKIYFK+ +HLC+ +IR+I+++ + D ++ +VTY YY GR +F+ +F A
Sbjct: 172 VNQLFKIYFKINKLHLCKPLIRAIDSSNLKD--DYSTAQRVTYRYYVGRKAMFDSDFKQA 229
Query: 135 DQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRG 194
++ LS+A +C+ S+ N RM+L YL+PVK+ +G +P LL KY+L++++ + +A+ G
Sbjct: 230 EEYLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTRAVSEG 289
Query: 195 DLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPS---KAHQMKL 251
+L LL AL HE F+R G++L+LEKL++ Y+ LFKK+ + K HQ+ L
Sbjct: 290 NLLLLNEALAAHETFFIRCGIFLILEKLKIITYRNLFKKVNSLSSASSRYLLLKTHQLSL 349
Query: 252 DVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
D + ALK++++ D+D+ EV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 350 DAFLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLS 405
>sp|Q5U3P0|PCID2_DANRE PCI domain-containing protein 2 OS=Danio rerio GN=pcid2 PE=2 SV=1
Length = 399
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 189/294 (64%), Gaps = 18/294 (6%)
Query: 23 LGIRLGFGSIADRELASNGKSP--EKLKAAGSFLMKVFGVLAGKG------SKRVGALYL 74
L +R+ F + A++ L GK + L+ A LM F V A SK+ G L+L
Sbjct: 113 LDLRI-FANNAEQHLQQKGKGKVGDMLEKAAEQLMSCFRVCASDNRAGIDDSKKWGMLFL 171
Query: 75 TCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAA 134
QLFKIYFK+ +HLC+ +IR+I+++ + D E+ +VTY YY GR +F+ +F A
Sbjct: 172 INQLFKIYFKINKLHLCKPLIRAIDSSNLKD--EYTMAQRVTYKYYVGRKAMFDSDFKPA 229
Query: 135 DQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRG 194
++ LS++ +C+ + N R+IL YL+PVK+ +G +P LL+KY+L++++++ +A+ G
Sbjct: 230 EECLSFSFTHCHRSCQRNKRLILIYLLPVKMLLGHMPTHQLLKKYDLMQFADVTRAVSEG 289
Query: 195 DLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVI 254
+L LL AL +HE F+R G++L+LEKL++ Y+ LFKK+Y + + HQ+ L
Sbjct: 290 NLLLLNAALVKHETFFIRCGIFLILEKLKIITYRNLFKKVYHL------LRTHQLPLAAF 343
Query: 255 VKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNG 307
+ +L+ ++ D+D+DEV+CI+A LI+ +KGY +H+ + +V+SKQ+PFP L+
Sbjct: 344 LVSLQMTKVEDVDIDEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSS 397
>sp|Q9VTL1|PCID2_DROME PCI domain-containing protein 2 homolog OS=Drosophila melanogaster
GN=PCID2 PE=1 SV=2
Length = 395
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 169/267 (63%), Gaps = 15/267 (5%)
Query: 47 LKAAGSFLMKVFGVLAGKG------SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIET 100
L+ A +M F V A G +KR+G + L QLFKIYF++ +HLC+ +IR+I+
Sbjct: 136 LEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLIRAIDN 195
Query: 101 ARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYL 160
IF + FP +++TY Y+ GR +F+ N+ AA Q LSYA NC + +N R+IL YL
Sbjct: 196 C-IFK-DSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYL 253
Query: 161 IPVKLSIGILPKDWLLEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLE 220
+PVK+ +G LP LL++Y+L+ + ++ A++ G++ + + E +RSG+YL++E
Sbjct: 254 VPVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFDEIVRDQELVLIRSGIYLLVE 313
Query: 221 KLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIH 279
KL+ VY+ LFKK+++I+ K+HQ+ + + AL ++ + D+ +DE CIVA LI+
Sbjct: 314 KLKFLVYRNLFKKVFVIR------KSHQLDMGDFLSALHFVGLTDVSLDETHCIVANLIY 367
Query: 280 KNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+KGY +H +V+SKQ+PFP ++
Sbjct: 368 DGKIKGYISHAHNKLVVSKQNPFPSVS 394
>sp|Q54PX7|PCID2_DICDI PCI domain-containing protein 2 homolog OS=Dictyostelium discoideum
GN=pcid2 PE=3 SV=1
Length = 430
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 156/247 (63%), Gaps = 11/247 (4%)
Query: 66 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLE 125
SK+ AL + QLF+IYFK+ + LC+++I+++E+ E +P +TY ++ GRL
Sbjct: 194 SKKNAALGVVNQLFQIYFKINNLKLCKNLIKTMESPGFPTLESYPLNQVITYRFFNGRLS 253
Query: 126 VFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVEYS 185
VFN + A ++L YA C S N R+IL +L+P++L PK LLEK+ L ++
Sbjct: 254 VFNGQYKKAQEELLYAFNKCPNDSIKNKRLILLFLVPMQLEQCKFPKKSLLEKFKLTQFI 313
Query: 186 NIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSK 245
+IVQ+++ G+++ L H++ F+ G+YL+LEKL++ VY+ LFKK+++I +
Sbjct: 314 DIVQSIKSGNIKQFNECLSTHQNFFISKGIYLILEKLKIIVYRNLFKKVHLI------TT 367
Query: 246 AHQMKLDVIVKALKWLEMD-MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPK 304
++ + V ALKW+E D +D+DE ECI++ LI+ +KGY +HK +VV S +PFPK
Sbjct: 368 GQRIPIGNFVSALKWMENDAIDIDETECILSNLIYNGYLKGYISHKVALVV-SPTNPFPK 426
Query: 305 LNGKPVN 311
L P+N
Sbjct: 427 L---PLN 430
>sp|Q95QU0|PCID2_CAEEL PCI domain-containing protein 2 homolog OS=Caenorhabditis elegans
GN=C27F2.10 PE=3 SV=1
Length = 413
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 156/257 (60%), Gaps = 9/257 (3%)
Query: 57 VFGVLAGKGS-KRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKV 115
V V A +G+ K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV
Sbjct: 164 VSDVHAEEGTTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGSL-YHDFLMSDKV 222
Query: 116 TYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWL 175
Y Y+ GR +F+ + A++ L YA NC S +N R IL YLIPVK+ +G +P L
Sbjct: 223 AYNYFLGRKAMFDADLNLAEKSLLYAFRNCPADSMSNKRKILIYLIPVKMFLGHMPTSQL 282
Query: 176 LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIY 235
L +Y L E+ ++V ++ G+L L AL +E F++ G++L+LEKL + ++ LFKK+
Sbjct: 283 LHEYRLDEFQDVVAGVKDGNLAQLDGALAANEAFFIKCGIFLMLEKLRMITFRTLFKKVS 342
Query: 236 IIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVV 294
I Q+ LD AL+++ + D+D+DE+ECI+A LI +KGY +H+ + +
Sbjct: 343 QI------VGTAQIPLDAFQTALRFVGVTDVDMDELECIIANLIASKKIKGYLSHQHQKL 396
Query: 295 VLSKQDPFPKLNGKPVN 311
V+SK + FP L+G N
Sbjct: 397 VISKMNAFPTLSGVSSN 413
>sp|Q60YJ7|PCID2_CAEBR PCI domain-containing protein 2 homolog OS=Caenorhabditis briggsae
GN=CBG18211 PE=3 SV=1
Length = 413
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 157/257 (61%), Gaps = 9/257 (3%)
Query: 57 VFGVLAGKG-SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKV 115
V V A +G +K+V L +T QLF+IYF++ ++L + +IR+I+ + +F DKV
Sbjct: 164 VSDVHAEEGKTKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGPL-YNKFLMADKV 222
Query: 116 TYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWL 175
Y Y+ GR +F+ + A++ L YA NC +S +N R IL YLIPVK+ +G +P L
Sbjct: 223 AYNYFLGRKALFDGDLILAEKGLVYAFRNCPTESVSNKRKILVYLIPVKMFLGHMPTASL 282
Query: 176 LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIY 235
L +Y L E+ +V A++ G L + +AL + + F++ G+YLVLEKL Y+ LFKK+
Sbjct: 283 LHRYRLDEFQEVVAAVKDGHLGRVDNALLTNGEFFIKCGIYLVLEKLRTITYRNLFKKVS 342
Query: 236 IIQKQKDPSKAHQMKLDVIVKALKWLEM-DMDVDEVECIVAILIHKNLVKGYFAHKSKVV 294
+ + Q+ LD AL+++ + D+D+DE+ECI+A LI + VKGY AH+ + +
Sbjct: 343 QMVGKV------QIPLDAFQAALRFVGVTDVDMDELECIIANLIAEKKVKGYLAHQHQKL 396
Query: 295 VLSKQDPFPKLNGKPVN 311
V+SK + FP L+ N
Sbjct: 397 VISKTNAFPTLSSVSSN 413
>sp|P0CR48|CSN12_CRYNJ Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=CSN12 PE=3
SV=1
Length = 403
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 157/284 (55%), Gaps = 16/284 (5%)
Query: 33 ADREL-ASNGKSPEKLKAAGSFLMKVFGVLA------GKGSKRVGALYLTCQLFKIYFKL 85
AD+ + A GK P L+ + K F + A G+ S+R G + C K YFK+
Sbjct: 122 ADQTIHAETGKMPS-LEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTACLTIKCYFKV 180
Query: 86 GTVHLCRSVIRSI-ETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALIN 144
G +LC+++IR++ + + P D+VT+ +Y G L N AD++LS+AL +
Sbjct: 181 GKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKADEELSWALKH 240
Query: 145 CNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHA 202
C ++ N +IL YLIP++L G P LL ++ +E ++ + A++ GD+
Sbjct: 241 CPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIKNGDVEEYDRR 300
Query: 203 LEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLE 262
LE + + + V+LV+E+ + LFKK ++ K+ ++ ++ ALK
Sbjct: 301 LEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS-----DKSTRVPIETFRLALKLHG 355
Query: 263 MDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+D++ DEVEC+VA +I++ +KGY +H+ K+VVL K +PFPK++
Sbjct: 356 VDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMS 399
>sp|P0CR49|CSN12_CRYNB Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=CSN12 PE=3 SV=1
Length = 403
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 157/284 (55%), Gaps = 16/284 (5%)
Query: 33 ADREL-ASNGKSPEKLKAAGSFLMKVFGVLA------GKGSKRVGALYLTCQLFKIYFKL 85
AD+ + A GK P L+ + K F + A G+ S+R G + C K YFK+
Sbjct: 122 ADQTIHAETGKMPS-LEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTACLTIKCYFKV 180
Query: 86 GTVHLCRSVIRSI-ETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALIN 144
G +LC+++IR++ + + P D+VT+ +Y G L N AD++LS+AL +
Sbjct: 181 GKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKADEELSWALKH 240
Query: 145 CNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLLRHA 202
C ++ N +IL YLIP++L G P LL ++ +E ++ + A++ GD+
Sbjct: 241 CPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIKNGDVEEYDRR 300
Query: 203 LEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLE 262
LE + + + V+LV+E+ + LFKK ++ K+ ++ ++ ALK
Sbjct: 301 LEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMAS-----DKSTRVPIETFRLALKLHG 355
Query: 263 MDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFPKLN 306
+D++ DEVEC+VA +I++ +KGY +H+ K+VVL K +PFPK++
Sbjct: 356 VDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMS 399
>sp|Q4P8T5|CSN12_USTMA Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=CSN12 PE=3 SV=1
Length = 454
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 12/251 (4%)
Query: 66 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLE 125
S++ G + +FK YF+L +V LCR+++R+I A + D +P+ +VT+ YY G L
Sbjct: 197 SRKWGTYEVVGMVFKTYFRLKSVGLCRNILRAINAADLPDLCAYPRSQQVTFRYYVGVLA 256
Query: 126 VFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYN----- 180
NE + A+ +L +L C+ + N +IL YLIPVKL G LP LL+
Sbjct: 257 FLNEEYDHAELELQASLQMCHRCALINQGLILTYLIPVKLLKGSLPHPSLLDPTTPIGRK 316
Query: 181 LVEYSNIVQALRRGDLRLLRHALEEH--EDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQ 238
L Y +ALR GD++ AL E ++ G Y+ +E+ + L K I+ +
Sbjct: 317 LAVYQPFTRALRTGDVKAFDQALANPTIESSLVKRGTYIAIERARDATLRTLLKTIW-LS 375
Query: 239 KQKDPSKAHQMKLDVIV----KALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVV 294
+P+ +L + + + + + + E+E I+A LI+K VKGY AH+ V+
Sbjct: 376 LPLNPTNTRPTRLTLTLLHHATSTDLIRLKYSIKELEWILATLIYKGYVKGYIAHERGVL 435
Query: 295 VLSKQDPFPKL 305
VLS +D FP L
Sbjct: 436 VLSAKDAFPAL 446
>sp|Q4WJX0|CSN12_ASPFU Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1
Length = 455
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 159/293 (54%), Gaps = 21/293 (7%)
Query: 27 LGFGSIADRELASNGKSPEKLKAAGSFLMKVFGV-LAGKG----SKRVGALYLTCQLFKI 81
+ FG ++A++ + KL+ A + ++F + L+ + S++ G T LFK
Sbjct: 153 MAFGDQLQDDVAADFEKSAKLEEAARIINRMFTLCLSDRAPIEESRKWGIYNTTNLLFKT 212
Query: 82 YFKLGTVHLCRSVIR--SIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLS 139
YFKL +V L ++++R S +A + + E FPK VT+ YY G + +EN+ A++ L+
Sbjct: 213 YFKLNSVGLSKNLLRALSASSADLPELEAFPKSHIVTFKYYVGVIHFLDENYREAEEHLA 272
Query: 140 YALINCNPQSEANIRMILKYLIPVKL-SIGILPKDWLLEKYNLVE--YSNIVQALRRGDL 196
YA C+ + N +IL YL+P L + LP LL + +E + + +R+GDL
Sbjct: 273 YAWNMCHKGAFKNRELILTYLVPCHLVTTHTLPSQKLLAPFPRLEKLFRPLCDCIRKGDL 332
Query: 197 RLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYI---IQKQKD---PSKAHQMK 250
A+ E++F++ +YL LE+ + LF+K++I ++ KD P + ++
Sbjct: 333 VGFDTAMFAGEEEFVKRRIYLPLERGRDIALRNLFRKVFIAGGFEESKDGQPPIRRTRVP 392
Query: 251 LDVIVKALK-WLEMD----MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSK 298
+ AL+ D +D+DEVEC+++ LI+K L+KGY A + +VVLSK
Sbjct: 393 VAEFAAALRIGTHADDRSRVDIDEVECLLSNLIYKGLMKGYIARERGMVVLSK 445
>sp|O13873|CSN12_SCHPO Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=csn12 PE=3 SV=1
Length = 423
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 13/268 (4%)
Query: 45 EKLKAAGSFLMKVFGVLAG-----KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIE 99
E+L+A + + F + S++ GA Y+ LFK+Y +L VHL +V+R+++
Sbjct: 157 EQLEATARLINRAFTICINDRAPLSTSRKWGAYYIMGLLFKLYLRLDCVHLTNNVLRAMK 216
Query: 100 TARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKY 159
+ D FPK V + YY G + N+N+ A +L A C+ N+ +IL Y
Sbjct: 217 VVELPDISLFPKSHVVIFHYYLGIVAFLNQNYKNASAELEIAFSLCHKGYNRNLELILSY 276
Query: 160 LIPVKLSIG-ILPKDWLLEKY-NLVE-YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVY 216
IP ++ + LP LL K+ NL Y + +AL+ G+L L+++E ++ +Y
Sbjct: 277 WIPTRILVNHQLPTKNLLSKFPNLASVYIPLTRALKSGNLGEFGKCLQKNETLLAKTKIY 336
Query: 217 LVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAI 276
L LE + LF+K +II K+ ++ + V AL+ D+ VE I+A
Sbjct: 337 LTLEGTRDLCIRNLFRKTWIIC-----GKSTRLPVSVFQIALQVAGTDLPKLHVEAILAN 391
Query: 277 LIHKNLVKGYFAHKSKVVVLSKQDPFPK 304
+I K ++GY + + VVLS +DPFPK
Sbjct: 392 MISKGYMRGYISRNFETVVLSAKDPFPK 419
>sp|Q4IMN9|CSN12_GIBZE Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2
Length = 455
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 136/254 (53%), Gaps = 17/254 (6%)
Query: 66 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSI----ETARIFDFEEFPKRDKVTYMYYT 121
S++ G ++ LFK YFKL + L R++++++ + + E FPK +VT+ +Y
Sbjct: 199 SRKWGIYFVINLLFKTYFKLNSASLSRTILKTLAVYNDKGDMPPLEMFPKSQRVTFKFYE 258
Query: 122 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVKL-SIGILPKDWLLEKYN 180
G L EN+ A+ L+ A C+ + IL YLIP +L + +LP LLE Y
Sbjct: 259 GVLLFLEENYIKAESHLNEAWQLCHKDAYPQSERILTYLIPCRLLTSHVLPTKALLENYP 318
Query: 181 LVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYII- 237
++ + + ++ G+L+ AL+ E +F++ +YL LE+ + L +K++I
Sbjct: 319 RLQDLFLPLATCIKTGNLQAFDQALQRGEAEFVKRRIYLTLERGRDIALRNLLRKVFIAG 378
Query: 238 ----QKQKDPSKAHQMKLDVIVKALKWLEMD----MDVDEVECIVAILIHKNLVKGYFAH 289
K+ D + + ++ V + + M +D DEVEC++A +I+K+L+KGY A
Sbjct: 379 GFDEAKEADAAPVRRTRIPV-AEFQAAISMGSGHLVDPDEVECMLANMIYKDLMKGYIAR 437
Query: 290 KSKVVVLSKQDPFP 303
+ +VVLSK+ FP
Sbjct: 438 ERGIVVLSKKGAFP 451
>sp|Q7SD63|CSN12_NEUCR Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-12
PE=3 SV=1
Length = 461
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 27/301 (8%)
Query: 30 GSIADRELASNGKSPEKLKAAGSFLMKVFGVLAG-----KGSKRVGALYLTCQLFKIYFK 84
G I + + +KL+ L ++F + + S++ G Y+ LFK YFK
Sbjct: 157 GQIFQDDFDPESEQNQKLEDCARQLNRIFTLCLNDRAPLEESRKWGIYYIINLLFKTYFK 216
Query: 85 LGTVHLCRSVIRSIETAR--IFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYAL 142
L + L +++++++ R + FPK +VT+ YY G L EN+ A++ L+ A
Sbjct: 217 LNSASLSKNILKTLSAYRGDMPPLSAFPKSQQVTFKYYEGVLCFLEENYFQAEEHLTQAW 276
Query: 143 INCNPQSEANIRMILKYLIPVK-LSIGILPKDWLLEKYNLVE--YSNIVQALRRGDLRLL 199
C+ + N +IL YL+P L+ LP LLE Y ++ + + +++G+L
Sbjct: 277 SLCHKDAMKNKELILTYLVPCHLLTTHTLPSQKLLEPYPRLQKLFLPLSNCIKKGELHAF 336
Query: 200 RHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYII-----QKQKDPSKAHQMKLDV- 253
AL++ ED+F++ +YL LE+ + L +K++I K + + + ++ V
Sbjct: 337 DLALQQGEDEFVKRRIYLTLERGRDIALRNLLRKVFIAGGFEESKVEGGPRVRRTRIPVA 396
Query: 254 -IVKALKWLEMDM-DVDEVECIVAILIH---------KNLVKGYFAHKSKVVVLSKQDPF 302
A+ M + DE+EC++A +I+ KNL+KGY A + VVLSK F
Sbjct: 397 EFAAAISLGSKQMLETDEIECLMANMIYKLVTNQSGIKNLMKGYIARERGFVVLSKSGAF 456
Query: 303 P 303
P
Sbjct: 457 P 457
>sp|Q6C1L4|CSN12_YARLI Protein CSN12 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=CSN12 PE=3 SV=1
Length = 396
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 10/248 (4%)
Query: 64 KGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETAR--IFDFEEFPKRDKVTYMYYT 121
+ SK+ G + +L K+YF L ++ +SVI+ +E+ + +P+ TY YY
Sbjct: 151 QKSKKWGTYFFVGELCKLYFLLRKRNMSKSVIKVVESMSRDLPPLASYPRSHTCTYSYYR 210
Query: 122 GRLEVFNENFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSIGILPKDWLLEKYN 180
G L + +++ A L+ AL C +S N +IL +LIPV+ L +P + EK+
Sbjct: 211 GVLSLMDDDVEQAQNWLTQALNQCFYKSTDNQELILLHLIPVQFLMTNQVPSKAVWEKFP 270
Query: 181 LVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQ 238
+ Y ++ AL RGD+ A+ + F++ +YL +EK+ + V+++LF ++++ +
Sbjct: 271 RLHTVYHQMLTALLRGDVLSFDKAVTQRRSLFVKKYLYLAVEKMRVFVFEKLFYRVFLAK 330
Query: 239 KQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSK 298
KA ++ +D A K + +D+ D +E V+ +I+ + +KGY + + VVL
Sbjct: 331 -----DKATRITIDDYQAAAKLVGVDVSPDFLEATVSNMIYHDRLKGYISRERHTVVLRA 385
Query: 299 QDPFPKLN 306
+ FPKL+
Sbjct: 386 EGAFPKLD 393
>sp|Q6BGR7|CSN12_DEBHA Protein CSN12 homolog OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CSN12 PE=3
SV=2
Length = 438
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 159/310 (51%), Gaps = 28/310 (9%)
Query: 26 RLGFGSIADRELASNGKSPEKLKAA--GSFLMKVFG-VLAGKGSKRVGALYLTCQLFKIY 82
+ ++ + E ++ S E+L A GSF + + L SKR+ + L KIY
Sbjct: 130 EMELSNLENNEYGNSSSSLERLAATINGSFKLSLNDKNLDLSQSKRLDIYFFLGNLIKIY 189
Query: 83 FKLGTVHLCRSVIRSIETARIFDFEEF-----PKRDKVTYMYYTGRLEVFNENFPAADQK 137
FKLG + L +SV ++++ R F+ + KR VTY+YY+ L + + +F +++K
Sbjct: 190 FKLGKLELAKSVEKALKGTR-FNLPKLNGAGSSKRYAVTYLYYSALLSLDDADFTTSEEK 248
Query: 138 LSYAL--INC--NPQSEANIRMILKYLIPVKLSIG--ILPKDWLLEKYNLVEY---SNIV 188
L A+ ++C +P++ N + ++ + P + + EK+ +++ N+
Sbjct: 249 LVKAMEILSCYKDPKNVKNQTEKILIILLPLKLYNKRLTPSNEIWEKFPKLKFMYKDNLF 308
Query: 189 QALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKK-IYIIQKQKDPSKAH 247
A++ G+L+ AL +++ L++ +YL+ E ++ Y +L KK + II +K+H
Sbjct: 309 DAIKNGNLKKFDQALTKYQLILLKNHLYLLFEMMKSLCYLKLVKKTVSIIHSLNSETKSH 368
Query: 248 QMKLDVIVKALKWLEMD---------MDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSK 298
+ L I AL++ D ++D VECI+A LI +KGY +H ++ +VLSK
Sbjct: 369 IVPLSAIQLALEFSTNDSYKESDKFAYNLDAVECILANLISSGKIKGYLSHANRCIVLSK 428
Query: 299 QDPFPKLNGK 308
+ FP L K
Sbjct: 429 ANAFPSLEYK 438
>sp|Q75BU2|CSN12_ASHGO COP9 signalosome complex subunit 12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSN12
PE=3 SV=2
Length = 412
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 27/264 (10%)
Query: 63 GKGSKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDF----EEFPKRD--KVT 116
+KR GA Y LF+ Y +LG L ++++ +E+ R D F +R VT
Sbjct: 148 AASNKRHGAYYFALLLFRTYARLGAHSLVTNMVKVLES-RAQDLPPVERAFGERRALTVT 206
Query: 117 YMYYTGRLEVFNE-NFPAADQKLSYALINCNPQSEANIRMILKYLIPVK-LSIGILPKDW 174
Y YY GR ++ + L+ AL+ C+ + ++IL YL+PV L+ PK
Sbjct: 207 YCYYLGRYHACRRADYEKGFRWLNTALLTCHRDHTRHHQLILTYLVPVAFLARRWYPKHH 266
Query: 175 LLEKY------NLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQ 228
++ + + Y+ +V ALR GDL L L + LR G+YL L L +
Sbjct: 267 VIAAWPPPQDPAAIHYAALVAALRSGDLGLYDRELVRMQLPLLRRGLYLPLSHLRPYILL 326
Query: 229 RLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMD-------VDEVECIVAILIHKN 281
RL K ++ + + Q+ + +I AL + +D EC++A LI +
Sbjct: 327 RLVKAVWRLS-----GGSSQLPIRIIAAALAYSTSATPDAGGERLLDHTECLLANLIARG 381
Query: 282 LVKGYFAHKSKVVVLSKQDPFPKL 305
VKGY +H ++V+V+S+ +PFP+L
Sbjct: 382 YVKGYLSHGNRVLVVSRTEPFPRL 405
>sp|Q9Y820|YON7_SCHPO PCI domain-containing protein C1105.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1105.07c PE=4
SV=1
Length = 442
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 11/228 (4%)
Query: 81 IYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSY 140
+YF+L + LC+++ ++ ++ D + VT+ YY GR ++ A L +
Sbjct: 191 LYFRLKQIRLCQTIQANVISSGA-DISRATMAELVTFRYYLGRCHLYQRKIHQAKDHLLF 249
Query: 141 ALINCNPQSEANIRMILKYLIPVKLSIGILPKDWLLEKYNLV-EYSNIVQALRRGDLRLL 199
+ + C + R+ L YL L +G P LLEKY L + +++AL+ GD++
Sbjct: 250 SFLQCPDECYHQKRLSLIYLTTCLLILGKSPTKGLLEKYKLTAAFEPLIKALKSGDIKSF 309
Query: 200 RHALEEHEDQ--FLRSGVYL-VLEKLELQVYQRLFKKIYII---QKQKDPSKAHQMKLDV 253
R +LE++ + F++ G+YL +L++ E+ +++ LF+K+++ Q QK P + L
Sbjct: 310 RLSLEDNSRRKWFIKRGIYLTLLDRCEIILWRNLFRKVFLFTFEQSQKTPHVSGSYLL-- 367
Query: 254 IVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFAHKSKVVVLSKQDP 301
L + D+D+VECI LI + +KGY H S +VL K+DP
Sbjct: 368 TAARLSTNDNSYDMDDVECICVSLIDQGYIKGYIIHASSTLVL-KKDP 414
>sp|Q6CPB1|CSN12_KLULA COP9 signalosome complex subunit 12 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CSN12 PE=3 SV=1
Length = 424
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 42/276 (15%)
Query: 66 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEF-PKRDKVT-------Y 117
++++G Y+ LFK+Y ++ L ++ + E+ F E P ++ +
Sbjct: 158 NRKIGVFYIGTLLFKLYNRIKAYGLLNNMCKVFES----HFNEIGPYLSRINNDLIVIRF 213
Query: 118 MYYTGRLEVFNEN-----FPAADQKLSYALINCNPQSEANIR-MILKYLIPVK-LSIGIL 170
+Y G + +N F + + + S +R +L YLIP++ L +
Sbjct: 214 KFYMGLYYGYEKNNYALGFKWLQETFDICTLYESIPSTYKVRSQVLIYLIPMRILHLRHY 273
Query: 171 PKDWLLEK-YNLVE--YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVY 227
P+ L + Y V Y+ +V++L G+L+L +E++E ++ +Y+ + K++ V
Sbjct: 274 PRLAPLRRTYPSVAKIYTMLVKSLCTGNLKLYEKFIEDNEFYLVKRNLYVTVLKMKELVE 333
Query: 228 QRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWL-------------EMDMDVDEVECIV 274
+L KK +I+ ++ LD++ KA + D ++DE+ECI+
Sbjct: 334 LKLVKKAWILN-----GGNTKVPLDMLAKAFQISRGTPCHVTENVAPNHDQELDELECIL 388
Query: 275 AILIHKNLVKGYFAHKSKVVVLSKQDPFPKLNGKPV 310
A LI KN +KGY +H +V++ SK PFP L KP+
Sbjct: 389 ATLISKNYIKGYLSHSHRVMMTSKT-PFPGL-AKPL 422
>sp|P47130|CSN12_YEAST Cop9 signalosome complex subunit 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CSN12 PE=1 SV=1
Length = 423
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 66 SKRVGALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDK----------V 115
+K++G F IY +L + +++++ +E+ + + P +K V
Sbjct: 155 NKKIGCYMFANLEFSIYHRLSNKDMIKNLVKVLESR--VNARDIPPLNKSLAMEHKSQVV 212
Query: 116 TYMYYTGRLEVFNEN-FPAADQKLSYALINCNPQS----------EANIRMILKYLIPVK 164
Y YY G+ EN L+ AL+ C P + + I+ L+P+
Sbjct: 213 LYNYYLGQYYGCLENDHERGFFHLNEALLQC-PMLYVESTGKFVLQGQMEKIMILLVPLA 271
Query: 165 LSIGILPKDW--------LLEKYNLVE-YSNIVQALRRGDLRLLRHALEEHEDQFLRSGV 215
L L W + L + Y +V+++ G+L L HE FL G+
Sbjct: 272 LLTKRLYPHWDHPVIAGVITRSKRLSQVYPTLVRSVISGNLSLYEATAASHERFFLSQGL 331
Query: 216 YLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDE------ 269
++V+ L V+ RL ++ + Q + M L +++ A K + + DE
Sbjct: 332 HVVITLLREVVFTRLVQRCW----QWGNDRKSIMPLKILL-ATKQHDSSANEDEEEQLDA 386
Query: 270 VECIVAILIHKNLVKGYFAHKSKVVVLSKQDPFP 303
+EC +A I L++ Y +H ++ +V SK++PFP
Sbjct: 387 LECRLASAIASGLLRAYLSHSNRCIVFSKKEPFP 420
>sp|Q08231|THP1_YEAST Nuclear mRNA export protein THP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THP1 PE=1 SV=1
Length = 455
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 26/237 (10%)
Query: 21 SELGIRLGFGSIADRELASNGKSPEKLKAAGSFLMKVFGVLAGK----------GSKRVG 70
+E I L G + L + +S + L S L ++F + G +R+
Sbjct: 117 TEFIINLA-GKLDSFHLQLHTRSHQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRI- 174
Query: 71 ALYLTCQLFKIYFKLGTVHLCRSVIRSIETARIF-DFEEFPKRDKVTYMYYTGRLEVFNE 129
LYL +L IYF++ + LC ++ ++ + + F E+ ++ Y Y GR + N
Sbjct: 175 LLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNS 234
Query: 130 NFPAADQKLSYA---LINCNPQSEANIR---MILKYLIPVKLSIGILPKDW-----LLEK 178
A + + A L+N ++A R IL Y+IP L +G + K W L +
Sbjct: 235 QVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKMVK-WGPLRPFLSQ 293
Query: 179 YNLVEYSNIVQALRRGDLRLLRHALEEHEDQFL-RSGVYLVLEKLELQVYQRLFKKI 234
+ +S + + +R G+++ + L ++E R + ++LEKL + Y+ L K +
Sbjct: 294 ETIDNWSVLYKHVRYGNIQGVSLWLRQNERHLCARQLLIVLLEKLPMVTYRNLIKTV 350
>sp|Q6FJ48|CSN12_CANGA COP9 signalosome complex subunit 12 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CSN12 PE=3 SV=1
Length = 449
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 192 RRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDPSKAHQMKL 251
+ GD + ++EH Q+L G Y + ++ V+ RL K Y + +K + L
Sbjct: 319 KNGDTIVFDELIKEHAAQYLIDGTYSAMLLIKELVFLRLVKVCYKVNDKKSI-----LPL 373
Query: 252 DVIVKALKWLEMDMD---------------------VDEVECIVAILIHKNLVKGYFAHK 290
D+I + + D +DE+EC +A LI +KGY +H
Sbjct: 374 DLIAAGYRIHFRNHDNEENRVTTTNPRKLQKKNEDLLDELECRIANLIANGRIKGYLSHS 433
Query: 291 SKVVVLSKQDPFP 303
+ +VLSK +PFP
Sbjct: 434 QRCMVLSKTEPFP 446
>sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus
GN=Psmd3 PE=1 SV=3
Length = 530
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 175
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 284 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 343
Query: 176 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 231
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 344 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGV 403
Query: 232 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 284
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 404 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 451
Query: 285 GYFAHKSKVVVLSKQDP 301
GY K + + S ++P
Sbjct: 452 GYVQSKEMIDIYSTREP 468
>sp|Q9U5Z8|PSMD3_ANOST Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles stephensi GN=DOXA2 PE=3 SV=1
Length = 500
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 175
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 255 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 314
Query: 176 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 231
+ +L Y + QA+R G+L+ LE +QF + + ++ +L V +
Sbjct: 315 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLENFGEQFRQDHTFTLIIRLRHNVIKTAI 374
Query: 232 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 283
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 375 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIDATLDPE 421
Query: 284 KGYFAHKSKVVVLSKQDP 301
KGY K + S ++P
Sbjct: 422 KGYMRTKESTDIYSTREP 439
>sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus
GN=PSMD3 PE=2 SV=1
Length = 534
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 175
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 176 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 231
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 232 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 284
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 285 GYFAHKSKVVVLSKQDP 301
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens
GN=PSMD3 PE=1 SV=2
Length = 534
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVKLSIGILPKDWL 175
Y+YYTGR++ + A + ++ AL + + + K LI V+L +G +P
Sbjct: 288 YLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQ 347
Query: 176 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 231
K +L+ Y + QA+R G+L L++ ++F G Y ++ +L V +
Sbjct: 348 FRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGV 407
Query: 232 KKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV-------K 284
+ I + S + D+ K L++D D E IVA I ++ K
Sbjct: 408 RMISL-------SYSRISLADIAQK----LQLDSPED-AEFIVAKAIRDGVIEASINHEK 455
Query: 285 GYFAHKSKVVVLSKQDP 301
GY K + + S ++P
Sbjct: 456 GYVQSKEMIDIYSTREP 472
>sp|Q1ZXD3|PSMD3_DICDI 26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium
discoideum GN=psmD3 PE=1 SV=1
Length = 504
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEAN--IRMILKYLIPVKLSIGILPKDW 174
Y YY GR+ + + + L+ A I PQ+ A R + K L V+L +G +P+
Sbjct: 256 YFYYQGRIRAIQLEYAESFKFLTQA-IRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERN 314
Query: 175 LLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRL 230
K L Y ++ +A+R GDL ALE++ D F + ++++L V +
Sbjct: 315 TFSQKQLKIALKPYFHLTEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRLRSNVIKAG 374
Query: 231 FKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVK------ 284
KK+ + ++ + I LK+ D ++ I+A I ++
Sbjct: 375 LKKL--------NTAYSRISFNDICTKLKF---DGTTQDIMFIIAKTIKDGVIDATINYE 423
Query: 285 -GYFAHKSKVVVLSKQDPFPKLNGK 308
GY + + S Q+P + +
Sbjct: 424 GGYLQSRENIDAYSTQEPLHAFSNR 448
>sp|O61470|PSMD3_ANOGA Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Anopheles gambiae GN=Dox-A2 PE=3 SV=2
Length = 496
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 117 YMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIR-MILKYLIPVKLSIGILPKDWL 175
++YY GR++ + A ++L AL Q+ R + K +I V+L +G +P+ +
Sbjct: 251 FLYYLGRIKAAKLEYSVAHKQLVQALRKAPQQAAVGFRQTVQKLVIVVELLLGDIPERKV 310
Query: 176 LE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLF 231
+ +L Y + QA+R G+L+ L +QF + + ++ +L V +
Sbjct: 311 FRQAALRRSLGPYFQLTQAVRMGNLQRFGEVLVNFGEQFRQDHTFTLIIRLRHNVIKTAI 370
Query: 232 KKIYIIQKQKDPSK-AHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLV------- 283
+ I + + P A ++ LD ++ E IVA I ++
Sbjct: 371 RSIGLAYSRISPQDIARKLGLD-------------SPEDAEFIVAKAIRDGVIEATLDPE 417
Query: 284 KGYFAHKSKVVVLSKQDP 301
KGY K + S ++P
Sbjct: 418 KGYMRSKESTDIYSTREP 435
>sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn3 PE=3 SV=2
Length = 497
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 115 VTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRM---ILKYLIPVKLSIGILP 171
+ Y YY GR+ ++ A + L A I P + ++ + K I V+L +G +P
Sbjct: 248 IRYQYYLGRIRAIQLDYTTAHEHLVSA-IRKAPNTVYAVQFLEAVYKLHIVVQLLMGEIP 306
Query: 172 KDWL-----LEKYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQV 226
+ + LEK LV Y I QA+R GDL AL ++E +F G+Y ++ +L V
Sbjct: 307 ERRIFRQKSLEK-TLVPYLRISQAVRIGDLCAFTDALSKYEAEFRFDGLYTLICRLRHTV 365
>sp|Q8SRT7|RPN3_ENCCU 26S proteasome regulatory subunit RPN3 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN3 PE=1 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 184 YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQVYQRLFKKIYIIQKQKDP 243
Y + A++R D++ LE ++D+ + G+Y V ++L V Q +KI ++ +
Sbjct: 232 YFKLASAVKRADIKKFEETLESNKDELMSQGLYFVAKRLSQNVIQEGIRKISVVYSRISY 291
Query: 244 SKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHKNLVKGYFA 288
+ + ++ EVE +V I K L+KG A
Sbjct: 292 EDIAHI-------------LGINSGEVEYLVKRTIRKGLIKGKVA 323
>sp|Q9LNU4|PSD31_ARATH Probable 26S proteasome non-ATPase regulatory subunit 3a
OS=Arabidopsis thaliana GN=EMB2719 PE=1 SV=3
Length = 488
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 15/195 (7%)
Query: 106 FEEFPKRDKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANIRMIL-KYLIPVK 164
FE + Y++Y G++ + A + L A P + R+ K+ I V+
Sbjct: 231 FEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKA-PIAALGFRIQCNKWAILVR 289
Query: 165 LSIGILPKDWLLEKYNLVE----YSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLE 220
L +G +P+ + + + + Y + A+R GDL L R E+ D F + + ++
Sbjct: 290 LLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIV 349
Query: 221 KLELQVYQRLFKKIYIIQKQKDPSKAHQMKLDVIVKALKWLEMDMDVDEVECIVAILIHK 280
+L V + + I I ++ L + K L+ L + V + E IVA I
Sbjct: 350 RLRHNVIRTGLRNISI--------SYSRISLPDVAKKLR-LNSENPVADAESIVAKAIRD 400
Query: 281 NLVKGYFAHKSKVVV 295
+ HK+ +V
Sbjct: 401 GAIDATIDHKNGCMV 415
>sp|B2U9R2|SYE_RALPJ Glutamate--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=gltX
PE=3 SV=1
Length = 465
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 226 VYQRLFKKIYIIQ-KQKDPSKAHQMKLDVIVKALKWLEMDMD---------VDEVECIVA 275
+ R K +I++ + D ++ Q +DVI++A+ WL+MD+D +D +VA
Sbjct: 30 AFARKMKGDFILRIEDTDVERSSQEAVDVILEAMDWLDMDIDEGPFYQMQRMDRYRAVVA 89
Query: 276 ILIHKNLV 283
++ + L
Sbjct: 90 QMVQQELA 97
>sp|Q04908|PSMD3_CAEEL 26S proteasome non-ATPase regulatory subunit 3 OS=Caenorhabditis
elegans GN=rpn-3 PE=1 SV=1
Length = 504
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 113 DKVTYMYYTGRLEVFNENFPAADQKLSYALINCNPQSEANI---RMILKYLIPVKLSIGI 169
D YMYY GR++ ++ +A A PQ E I + + K+++ + L G
Sbjct: 252 DLARYMYYQGRIKALQLDYNSAAGYFLQAQRKA-PQ-EGAIGFKQAVQKWVVVIGLLQGE 309
Query: 170 LPKDWLLE----KYNLVEYSNIVQALRRGDLRLLRHALEEHEDQFLRSGVYLVLEKLELQ 225
+P + + L Y ++ + +R GD+ H LE+ + QF ++ +L
Sbjct: 310 IPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFEADDTLTLIVRLRQN 369
Query: 226 VYQRLFKKI 234
V + K+I
Sbjct: 370 VIKTAIKQI 378
>sp|P47481|LON_MYCGE Lon protease OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=lon PE=3 SV=1
Length = 795
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 122 GRLEVFNENFPAAD-QKLSYALINCNPQSEANIRMILKYLIPVKLSIGILPK--DWLLEK 178
G V E F AD ++SY L+N + EAN+ L+ + P K I L + + LE
Sbjct: 96 GLQRVLIEKFSDADINEVSYQLLNSTVKDEANVDRFLQRIFPEKEEIEQLMEGAEKFLEL 155
Query: 179 YNLVEYSNIVQALRRGDL 196
N+ + N+ + L++ D+
Sbjct: 156 ENISKTVNVPKGLKQLDI 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,779,288
Number of Sequences: 539616
Number of extensions: 4574746
Number of successful extensions: 10348
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10251
Number of HSP's gapped (non-prelim): 47
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)