Query 021456
Match_columns 312
No_of_seqs 186 out of 421
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 03:06:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021456.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021456hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2575 Glucosyltransferase - 100.0 6E-116 1E-120 849.0 24.8 303 1-311 1-305 (510)
2 PF03155 Alg6_Alg8: ALG6, ALG8 100.0 2E-109 5E-114 826.9 20.2 266 44-312 2-271 (469)
3 KOG2576 Glucosyltransferase - 100.0 5.7E-80 1.2E-84 597.2 17.7 262 33-312 2-272 (500)
4 TIGR03459 crt_membr carotene b 99.0 1.5E-08 3.3E-13 102.4 19.4 128 100-252 140-269 (470)
5 PF09594 DUF2029: Protein of u 98.5 3.8E-06 8.2E-11 75.1 13.4 62 183-246 60-121 (241)
6 COG5650 Predicted integral mem 98.1 6.5E-06 1.4E-10 84.2 7.4 190 67-282 103-292 (536)
7 COG5542 Predicted integral mem 98.0 2.1E-05 4.6E-10 78.5 8.8 156 100-282 92-247 (420)
8 PF05208 ALG3: ALG3 protein; 97.8 0.00014 3E-09 72.0 9.8 96 202-304 130-225 (368)
9 PLN02841 GPI mannosyltransfera 97.7 0.0018 3.8E-08 65.7 17.0 121 101-250 64-185 (440)
10 PF13231 PMT_2: Dolichyl-phosp 97.7 0.00084 1.8E-08 55.9 11.8 150 102-282 1-157 (159)
11 PF02366 PMT: Dolichyl-phospha 97.5 0.0022 4.8E-08 58.7 13.4 173 40-243 2-190 (245)
12 COG1807 ArnT 4-amino-4-deoxy-L 97.1 0.012 2.5E-07 60.0 14.3 176 35-247 7-190 (535)
13 PF06728 PIG-U: GPI transamida 96.9 0.027 5.8E-07 55.9 14.6 133 102-251 57-195 (382)
14 KOG2762 Mannosyltransferase [C 96.8 0.0037 8E-08 61.9 7.5 100 202-309 158-257 (429)
15 PF05007 Mannosyl_trans: Manno 96.8 0.0038 8.3E-08 59.4 7.2 78 202-279 8-91 (259)
16 PRK13375 pimE mannosyltransfer 96.2 0.46 1E-05 48.1 18.3 168 38-242 20-193 (409)
17 PRK13279 arnT 4-amino-4-deoxy- 96.1 0.26 5.6E-06 51.6 16.4 165 85-282 47-224 (552)
18 KOG3893 Mannosyltransferase [C 95.2 0.067 1.5E-06 52.8 7.4 220 26-282 9-238 (405)
19 TIGR03663 conserved hypothetic 95.1 1 2.3E-05 45.7 16.0 160 37-245 3-173 (439)
20 PF10131 PTPS_related: 6-pyruv 95.0 0.35 7.5E-06 51.2 13.0 154 103-282 4-169 (616)
21 PF09852 DUF2079: Predicted me 94.7 0.43 9.3E-06 48.1 12.1 103 147-252 63-165 (449)
22 PF04188 Mannosyl_trans2: Mann 94.1 0.65 1.4E-05 47.1 12.0 102 179-282 145-249 (443)
23 TIGR03766 conserved hypothetic 90.3 1.7 3.8E-05 44.4 9.6 99 141-254 140-255 (483)
24 PF14897 EpsG: EpsG family 88.0 18 0.00039 33.5 13.9 53 196-248 109-161 (330)
25 PF14264 Glucos_trans_II: Gluc 85.1 13 0.00029 35.2 11.5 80 179-260 80-166 (319)
26 COG1287 Uncharacterized membra 82.0 54 0.0012 35.8 15.9 114 99-238 81-211 (773)
27 KOG3359 Dolichyl-phosphate-man 80.2 97 0.0021 34.0 17.3 136 102-252 82-238 (723)
28 PHA01514 O-antigen conversion 78.9 74 0.0016 33.3 14.9 183 99-309 46-243 (485)
29 KOG2647 Predicted Dolichyl-pho 78.5 53 0.0011 33.8 13.3 217 38-282 25-263 (444)
30 PF11028 DUF2723: Protein of u 76.6 15 0.00033 33.1 8.2 59 194-252 95-169 (178)
31 PF09913 DUF2142: Predicted me 61.1 1.7E+02 0.0036 28.5 13.6 111 103-239 95-215 (389)
32 COG1928 PMT1 Dolichyl-phosphat 60.1 72 0.0016 34.8 10.3 134 103-250 72-224 (699)
33 PF02516 STT3: Oligosaccharyl 51.3 1.5E+02 0.0033 29.5 10.6 90 101-212 68-163 (483)
34 COG3463 Predicted membrane pro 46.8 2.9E+02 0.0062 28.8 11.6 71 178-248 119-189 (458)
35 PF09586 YfhO: Bacterial membr 46.8 1.6E+02 0.0036 31.7 10.6 102 179-282 124-235 (843)
36 PF11044 TMEMspv1-c74-12: Plec 40.2 9.1 0.0002 27.5 -0.1 14 2-15 34-47 (49)
37 PF06781 UPF0233: Uncharacteri 29.0 1.4E+02 0.003 24.2 5.0 12 1-12 1-12 (87)
38 PF10067 DUF2306: Predicted me 28.0 30 0.00065 28.1 1.1 14 67-80 66-79 (103)
39 KOG2552 Major facilitator supe 26.8 6E+02 0.013 26.0 10.0 74 180-257 148-223 (388)
40 PRK10649 hypothetical protein; 25.7 6.3E+02 0.014 26.7 10.6 29 224-252 112-140 (577)
41 PRK12287 tqsA pheromone autoin 23.5 3.2E+02 0.0069 26.6 7.4 49 227-275 20-74 (344)
42 PHA03234 DNA packaging protein 23.4 64 0.0014 31.3 2.6 24 259-282 231-254 (338)
43 KOG2333 Uncharacterized conser 23.3 12 0.00026 39.2 -2.5 41 62-105 491-532 (614)
44 cd08692 C2B_Tac2-N C2 domain s 21.8 47 0.001 28.7 1.2 19 70-88 113-133 (135)
45 PLN02816 mannosyltransferase 21.5 9.8E+02 0.021 25.3 13.8 15 202-216 172-186 (546)
No 1
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=6e-116 Score=848.95 Aligned_cols=303 Identities=50% Similarity=0.808 Sum_probs=286.9
Q ss_pred CCchhhhhhhcccccccccccccccceecccCCcchHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHhc
Q 021456 1 MGKKKEKKKINEKVDVEAVEIEDDTWWWLTHKGIGATFLCISVFALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEITL 80 (312)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT~ 80 (312)
|++||+.+|.++++.+.+..++- |+..++|.....++++++++|++||++||||+|+|||||||||||||||||.
T Consensus 1 ~~~~k~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~l~~r~~Isl~pYSG~~~PPmyGDyEAQRHWmEIT~ 75 (510)
T KOG2575|consen 1 KAWRKPAIESNNPDPSKKFVSQF-----RSKMEKWLLSSPILLVLLCVRSAISLNPYSGAGSPPMYGDYEAQRHWMEITV 75 (510)
T ss_pred CCCcchhhhcCCCCccccccccc-----CCccchhhhHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHHhh
Confidence 68999999999999988888773 3556666667779999999999999999999999999999999999999999
Q ss_pred cCCcccccccccccCCCccccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHH
Q 021456 81 NLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIF 160 (312)
Q Consensus 81 ~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~ 160 (312)
|||++|||+|+|+||||||||||||+||||||++|.|++++||+||++++||||||..||+|||.|||++|+++|+||++
T Consensus 76 nLPv~qWY~n~t~NDLqYWGLDYPPLTAYhSyl~G~i~~f~NP~wvaL~tSRGfES~~hKlfMR~TViisd~liy~Pa~i 155 (510)
T KOG2575|consen 76 NLPVSQWYFNGTHNDLQYWGLDYPPLTAYHSYLLGIIGNFINPEWVALHTSRGFESIAHKLFMRSTVIISDLLIYLPALI 155 (510)
T ss_pred cCcHHHHhhcCCCCccceecCCCCcHHHHHHHHHHHHHhhcChhHhhhhccCCcccHHHHHHHHHHHHHHhHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCcchHHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHH
Q 021456 161 YFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVY 240 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY 240 (312)
++++++.|.+ ++..+...+++++++|++++||||||||||+|||++++||+++.++++++|+++|++|||+|||+||
T Consensus 156 fy~~~~~r~~---~~~~~~a~~~~iLl~P~L~LID~GHFQYNsisLGl~~~ai~~ll~~~~~~as~~F~LAlnyKQMeLY 232 (510)
T KOG2575|consen 156 FYFKWLHRTR---SKKSKIAYAALILLYPSLLLIDHGHFQYNSISLGLTLYAIAALLKNFYVLASVLFVLALNYKQMELY 232 (510)
T ss_pred HHHHHhhhcc---CcccHHHHHHHHHhCCceEEEecCcceechhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHH
Confidence 9998887544 3344566688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccCCC--hhhHHHHHHHHHHHHHHHHhhhhhchhhHhhHhHhhcCCCCCchhhhhhccC
Q 021456 241 YAPAFFSHLLGKCLRRKNP--IHGVAKLGLTVLGTFTVVWWPYLHSTDALLGVLSRLAPFERGIYEDYVANFC 311 (312)
Q Consensus 241 ~AP~~F~yLL~~c~~~~~~--~~rl~~lg~~Vi~tf~l~f~PFl~~~~~~~qvl~RlFPf~RGL~ed~vAn~~ 311 (312)
|||++|+||||+|++++.+ +.|++++|++|++||+++|.||+.+.++..||+||+|||+||+|||||||||
T Consensus 233 ~A~pfF~fLLg~c~k~k~~~~f~ri~~ia~~Vv~TF~iiw~P~~~~~~~~~qvl~RlFPf~RGlfEDKVANfW 305 (510)
T KOG2575|consen 233 HALPFFAFLLGSCLKPKLFNSFARIIKIALAVVGTFVIIWLPFLLSGDTALQVLHRLFPFARGLFEDKVANFW 305 (510)
T ss_pred hchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhCchhcchhhhhhhhhh
Confidence 9999999999999999876 9999999999999999999999988889999999999999999999999999
No 2
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=100.00 E-value=2.2e-109 Score=826.93 Aligned_cols=266 Identities=53% Similarity=0.919 Sum_probs=251.1
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHhccCCcccccccccccCCCccccCCCchHHHHHHHhhhhhcc-cC
Q 021456 44 FALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSYFHGLFLRF-FD 122 (312)
Q Consensus 44 ~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~llg~ia~~-~~ 122 (312)
+++++|++||++||||+|+|||||||||||||||||+|||++|||+|+||| ++|||||||||||||||++||+|++ +|
T Consensus 2 ~~~~~r~~v~l~p~s~~~~ppm~gDfEaqRhWmeiT~~LP~~~WY~~~t~~-l~yW~LDYPPl~Ay~~~~lg~~a~~~~~ 80 (469)
T PF03155_consen 2 IATLLRLLVSLGPYSGSGTPPMYGDFEAQRHWMEITHNLPISEWYFNDTSN-LQYWGLDYPPLFAYFSWLLGKIAHFFID 80 (469)
T ss_pred ceeHHHHHHHcCCcccCCCCCCCCcHHHHHHHHHHHccCCHHHHHhcCCCc-cCcCcCCCCchHHHHHHHHHhhccccCC
Confidence 578999999999999999999999999999999999999999999999999 9999999999999999999999999 99
Q ss_pred CCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhccceeeeecccccch
Q 021456 123 PDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYN 202 (312)
Q Consensus 123 p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILIDHgHFQYN 202 (312)
|+|+++.+||||||+++|+|||.|||++|+++++||++.+++.....++. +++++....+++++|||+|+|||||||||
T Consensus 81 p~~~~l~~s~g~~s~~~~~f~R~tVi~~d~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~PgLilIDH~HFQYN 159 (469)
T PF03155_consen 81 PEWVALVSSRGYESPSHKLFMRLTVIVSDLLLYIPAVLFFCKSSGRSRNQ-SSKQRFIALLLILLNPGLILIDHGHFQYN 159 (469)
T ss_pred chhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHCchHHhhhhhhhhHH
Confidence 99999999999999999999999999999999999999888866433322 34446677888999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhccC---CChhhHHHHHHHHHHHHHHHHh
Q 021456 203 CISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRK---NPIHGVAKLGLTVLGTFTVVWW 279 (312)
Q Consensus 203 gvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~---~~~~rl~~lg~~Vi~tf~l~f~ 279 (312)
|+|+|++++|++++.+||+++||++|+++||||||+||+||++|+||||+|++++ .+++|++++|++|++||+++|+
T Consensus 160 ~~~lGl~l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~c~~~~~~~~~~~~~~~lg~~Vi~~f~~~~~ 239 (469)
T PF03155_consen 160 GFLLGLLLLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLLGSCFQRKSFRFSIKRLIKLGIVVIATFALSFG 239 (469)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876 3589999999999999999999
Q ss_pred hhhhchhhHhhHhHhhcCCCCCchhhhhhccCC
Q 021456 280 PYLHSTDALLGVLSRLAPFERGIYEDYVANFCK 312 (312)
Q Consensus 280 PFl~~~~~~~qvl~RlFPf~RGL~ed~vAn~~~ 312 (312)
||+.+ +|++|+++|||||+||||||||||||+
T Consensus 240 PF~~~-~~l~Qvl~RlFPF~RGL~hdy~ANfW~ 271 (469)
T PF03155_consen 240 PFLYS-GQLQQVLSRLFPFKRGLFHDYWANFWC 271 (469)
T ss_pred HHHHh-hhHHHHHHHhCccccchHHHHHHHHHH
Confidence 99965 999999999999999999999999995
No 3
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=100.00 E-value=5.7e-80 Score=597.18 Aligned_cols=262 Identities=33% Similarity=0.587 Sum_probs=233.6
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHhccCCcccccccccccCCCccccCCCchHHHHHH
Q 021456 33 GIGATFLCISVFALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSY 112 (312)
Q Consensus 33 ~~~~~~~~~~~~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~ 112 (312)
|.+..++...+..+.+++.+-...+| ||||+|||||+||++||++|||+|+||| ||||||||+||+||
T Consensus 2 g~~~ll~~~~~~~t~lK~LLIP~Y~S--------TDFEVHRNWLAIT~slPlseWY~eaTSe----WTLDYPPFFAYFE~ 69 (500)
T KOG2576|consen 2 GKRQLLWAFAIITTFLKCLLIPAYRS--------TDFEVHRNWLAITHSLPLSEWYYEATSE----WTLDYPPFFAYFEW 69 (500)
T ss_pred chhHhHHHHHHHHHHHHheeeccccc--------cchhhhhhHHHHhccCchHHHHHhcccc----eecCCCcHHHHHHH
Confidence 44677888889999999999888888 9999999999999999999999999999 99999999999999
Q ss_pred Hhhhhhc--ccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCC-CCcchHHHHHHHHhcc
Q 021456 113 FHGLFLR--FFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSS-RKNDCAWHIAMLLLNP 189 (312)
Q Consensus 113 llg~ia~--~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~-~~~~~~~~~~~~llnP 189 (312)
.++++|+ .+||+++..++ .||+|..+.+|||.|||++|++..+... +.+...++.+ +.+++.+.+.++++||
T Consensus 70 ~LS~vA~ff~fD~~ml~~~~-l~y~s~~tl~FQR~SVIf~dll~~~~~r----r~~~l~~kl~k~~~~~~~~a~ll~~s~ 144 (500)
T KOG2576|consen 70 FLSQVAKFFGFDPRMLDVKN-LNYFSRRTLYFQRFSVIFSDLLLLYGLR----RSYRLTSKLGKDQKQRFACAVLLLLSP 144 (500)
T ss_pred HHHHHHHHhcCCchheeccc-cCCCCcceEEEEeehhHHHHHHHHHHHh----hhhcccccCCcccccchHHHHHHHhCC
Confidence 9999999 79999999974 8999999999999999999999877321 1121112111 3344455666789999
Q ss_pred ceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHh-hhhccCC----ChhhHH
Q 021456 190 CLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLG-KCLRRKN----PIHGVA 264 (312)
Q Consensus 190 ~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~-~c~~~~~----~~~rl~ 264 (312)
|++||||+||||||+++|++++||.++.++|+++||+.|+.++||||++||+||+||+|+|| +|+..++ ++.|.+
T Consensus 145 gLlIvDhIHFQYNgfLfgilLlSI~~l~~kr~l~~A~~fsvll~FKHIflY~ApaY~vylLr~Yc~~~nn~~~~~~~~vi 224 (500)
T KOG2576|consen 145 GLLIVDHIHFQYNGFLFGILLLSIVFLKTKRYLLSAFLFSVLLNFKHIFLYVAPAYFVYLLRNYCLTSNNVFLANFLNVI 224 (500)
T ss_pred CcEEEEEeeeecccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhheeeechhHHHHHHHHHHhcccchhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 6876553 467889
Q ss_pred HHHHHHHHHHHHHHhhhhhchhhHhhHhHhhcCCCCCchhhhhh-ccCC
Q 021456 265 KLGLTVLGTFTVVWWPYLHSTDALLGVLSRLAPFERGIYEDYVA-NFCK 312 (312)
Q Consensus 265 ~lg~~Vi~tf~l~f~PFl~~~~~~~qvl~RlFPf~RGL~ed~vA-n~~~ 312 (312)
|+|++|++.|+++++||+ ..+|++|+++|||||+|||+||||| |||+
T Consensus 225 kL~~vv~~~F~~s~gPf~-~~~qlpqvlSRLFPfsRGLtHAYWAPNFWA 272 (500)
T KOG2576|consen 225 KLGIVVLIPFAASFGPFI-YVQQLPQVLSRLFPFSRGLTHAYWAPNFWA 272 (500)
T ss_pred HHHHHHHHHHHHHhccHH-HHHHhHHHHHHhCCcccccchhhccchHHH
Confidence 999999999999999998 6899999999999999999999999 9996
No 4
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=99.05 E-value=1.5e-08 Score=102.35 Aligned_cols=128 Identities=18% Similarity=0.199 Sum_probs=101.7
Q ss_pred ccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchH
Q 021456 100 GLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCA 179 (312)
Q Consensus 100 gLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~ 179 (312)
+..|||++.+.+-..+.+ ..+.+. ..++.+|+..+++++++.+ +..++.++.+. + +.
T Consensus 140 ~aPYGPl~l~i~~~v~~l----~g~~i~----------~~v~~~Rl~~l~g~~l~~w-----~~~rLar~~g~-~---~~ 196 (470)
T TIGR03459 140 TTPYGPLHLLVGQAITTV----TGDNVT----------AGTLAFKLLSLPGLAVMVW-----AVPKLATHLGG-N---PT 196 (470)
T ss_pred CCCCChHHHHHHHHHHHH----hCCCcH----------HHHHHHHHHHHHHHHHHHH-----HHHHHHHHcCC-C---HH
Confidence 568999999988777763 333322 2578899999999998877 33345444321 1 22
Q ss_pred HHHHHHHhccceee--eecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhh
Q 021456 180 WHIAMLLLNPCLIL--IDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGK 252 (312)
Q Consensus 180 ~~~~~~llnP~LIL--IDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~ 252 (312)
.+.-+..+||-+|+ +.++|+ |++|+|+++.++++..++|.+.|+++.+++.+.|..++...|.++.+..++
T Consensus 197 ~AlWL~~~NPLviihlvgg~Hn--ealM~gl~l~gl~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 197 VALWLGVLNPLVVIHLIGGMHN--EMLMVGLVSAGILLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred HHHHHHHcCchhhhhhhcchhH--HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444789999998 899999 999999999999999999999999999999999999999999988776654
No 5
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.46 E-value=3.8e-06 Score=75.07 Aligned_cols=62 Identities=27% Similarity=0.352 Sum_probs=51.6
Q ss_pred HHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHH
Q 021456 183 AMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFF 246 (312)
Q Consensus 183 ~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F 246 (312)
..+.+.|. +.+..-.|.|.+...++++++++..++|+.+|+++++++...|+.++.+.|.+.
T Consensus 60 ~~~~~~p~--~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll 121 (241)
T PF09594_consen 60 LLLAFPPV--LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALL 121 (241)
T ss_pred HHHHHHHH--HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555 455556677999999999999999999999999999999999999999888443
No 6
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=98.10 E-value=6.5e-06 Score=84.19 Aligned_cols=190 Identities=18% Similarity=0.220 Sum_probs=121.4
Q ss_pred cchhhhhHHHHHhccCCcccccccccccCCCccccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHH
Q 021456 67 GDYEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWT 146 (312)
Q Consensus 67 gDfEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~t 146 (312)
++||.--+|+|+-.+ .+|+.-++++--.| .-||+++-=..+. |.+..+.=|.-.++- +.. .....-+=.+
T Consensus 103 ~~~p~~asw~~vh~~---~P~~r~~ms~af~y--~~yPv~~~~y~~~-~~v~~~~Y~~L~~ll---~lP-~~~ef~~~f~ 172 (536)
T COG5650 103 LTFPYYASWLEVHGF---DPYVRYNMSKAFRY--MHYPVLGTPYQTG-GYVIYFSYPGLSALL---FLP-VLFEFNPFFK 172 (536)
T ss_pred ccchhhhhheeecCC---Cccchhhhhhhhee--EeeccccCccccc-ceEEEEEecchhhhc---cCc-cccccchhhh
Confidence 478888899988766 55666556543233 6889987211111 111111112211110 000 1122224455
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHH
Q 021456 147 VLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASC 226 (312)
Q Consensus 147 VI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv 226 (312)
|.+--+.++.-.++++.| +. ....+.+.+++...+|-+...|-.-| +.+..+++..+..+ ++|..+|++
T Consensus 173 V~AF~~A~~~l~~i~~~r----~g---l~~~~~~~valv~as~~v~f~v~~~~--DtI~~ffla~a~v~--r~rP~lAGv 241 (536)
T COG5650 173 VLAFLLALIWLLVIYFIR----KG---LAGSRVLDVALVAASPLVGFAVFTVF--DTIWAFFLAAALVC--RGRPKLAGV 241 (536)
T ss_pred HHHHHHHHHHHHHHHHHH----hc---ccccceeeeeeeeccceEEEEEecch--hHHHHHHHHHHHHh--cCCchHHHH
Confidence 555555554433333332 11 12224455667788994444566655 88888888877777 999999999
Q ss_pred HHHHHhcchhhhHHHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 227 LFTLALSHKQMSVYYAPAFFSHLLGKCLRRKNPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 227 ~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
++.++..+||.+++.+|++..++-++ .+.+...+...+.++|++++.+||+
T Consensus 242 l~Gls~a~K~~P~Ivl~pll~~~~ke-----yg~~~a~~f~~~aa~t~lLvN~Pfi 292 (536)
T COG5650 242 LIGLSSAFKQIPLIVLPPLLYLIYKE-----YGLRPAIKFIATAAITWLLVNLPFI 292 (536)
T ss_pred HHHHHHHhhcCchhhHHHHHHHHHHh-----cCcchHHHHHHHHHHHHHHHcCceE
Confidence 99999999999999999999777543 4678899999999999999999999
No 7
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=98.01 E-value=2.1e-05 Score=78.50 Aligned_cols=156 Identities=17% Similarity=0.133 Sum_probs=117.6
Q ss_pred ccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchH
Q 021456 100 GLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCA 179 (312)
Q Consensus 100 gLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~ 179 (312)
-.||+|+.-|..-+.++++.... ..+--.+..+++|++..+. +. ++.+++- +..+...
T Consensus 92 ~~~~~p~~~y~i~ii~~L~~~~~----------------~~l~~~l~s~~~~~~~ay~-lY----~~tk~~y-~~~~~a~ 149 (420)
T COG5542 92 FADYFPLYLYWIRIINKLLSSLY----------------FILAIKLFSNIADFVAAYF-LY----KITKLRY-GLGSMAR 149 (420)
T ss_pred ccccCchHHHHHHHHHHHHhhhH----------------HHHHHHHHHHHHHHHHHHH-HH----HHHHHHc-ccchhhh
Confidence 36999999999999999776511 1222356667777776551 11 2222221 1112233
Q ss_pred HHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhccCCC
Q 021456 180 WHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRKNP 259 (312)
Q Consensus 180 ~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~~~ 259 (312)
.+...+.++|..|...-++.|=+|+.+.+.+++++++.+++...|+++|++|..+|..++.++|.+.+.+.++ ++
T Consensus 150 fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~ik~-----~~ 224 (420)
T COG5542 150 FATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLIKN-----RK 224 (420)
T ss_pred heEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHHhh-----hh
Confidence 4455677889999999999999999999999999999999999999999999999999999999999998875 23
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhh
Q 021456 260 IHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 260 ~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
++........+-.|+.....|..
T Consensus 225 ik~i~~~l~~~~l~~~~ll~~~~ 247 (420)
T COG5542 225 IKIIWYLLPSGSLTYLSLLMPAW 247 (420)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHH
Confidence 66666667777777777777775
No 8
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=97.77 E-value=0.00014 Score=72.01 Aligned_cols=96 Identities=26% Similarity=0.280 Sum_probs=83.5
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHhhh
Q 021456 202 NCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRKNPIHGVAKLGLTVLGTFTVVWWPY 281 (312)
Q Consensus 202 NgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~~~~~rl~~lg~~Vi~tf~l~f~PF 281 (312)
+|+...++..|+.++.++|..+||++|++|++.|-=.|.++|++++.++.. .++.+.+....+..++-+++=+||
T Consensus 130 D~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~-----~g~~~~~~~l~v~~~vQvllg~PF 204 (368)
T PF05208_consen 130 DCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQS-----LGLLKTLWYLAVCALVQVLLGLPF 204 (368)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHhhHH
Confidence 678888888999999999999999999999999999999999998888754 367888888888889999999999
Q ss_pred hhchhhHhhHhHhhcCCCCCchh
Q 021456 282 LHSTDALLGVLSRLAPFERGIYE 304 (312)
Q Consensus 282 l~~~~~~~qvl~RlFPf~RGL~e 304 (312)
+. ..-..=++|=|=|+|-..+
T Consensus 205 L~--~~p~~Yl~~AFdf~R~Fl~ 225 (368)
T PF05208_consen 205 LL--TNPWSYLSRAFDFSRQFLY 225 (368)
T ss_pred HH--hCHHHHHHHhcccCceEEE
Confidence 93 3445789999999997654
No 9
>PLN02841 GPI mannosyltransferase
Probab=97.72 E-value=0.0018 Score=65.71 Aligned_cols=121 Identities=19% Similarity=0.299 Sum_probs=86.4
Q ss_pred cCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHH
Q 021456 101 LDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAW 180 (312)
Q Consensus 101 LDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~ 180 (312)
--|+|+-|+.. -|+.. .+..|-+.-=+++|++.-+-. .+..++++. +.+....
T Consensus 64 YrytPLLa~Ll----------lPn~~-----------~~~~fgk~LF~l~Dll~a~ll-----~~il~~~~~-~~~~~~~ 116 (440)
T PLN02841 64 YRYSPLLALLL----------VPNSL-----------LHRSWGKFLFSAADLLVGLFI-----HTILRLRGV-PEKVCTW 116 (440)
T ss_pred CCcChHHHHHH----------cchhh-----------hhhhHHHHHHHHHHHHHHHHH-----HHHHHHhCc-cccccHH
Confidence 38999999876 12110 013455777788999886621 123332221 1122345
Q ss_pred HHHHHHhccceeeeec-ccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHH
Q 021456 181 HIAMLLLNPCLILIDH-GHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLL 250 (312)
Q Consensus 181 ~~~~~llnP~LILIDH-gHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL 250 (312)
..++.++||-.|.|.- |=- +++.-.+++++++++.+||...||+++++++.+|-=++.++|++..++-
T Consensus 117 ~a~~wL~NPlti~istrGSs--e~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l~ 185 (440)
T PLN02841 117 SVMVWLFNPFTFTIGTRGNC--EPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVLD 185 (440)
T ss_pred HHHHHHhCcHHHHHhcccch--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHhc
Confidence 5678999999998633 233 6777778889999999999999999999999999999999999998883
No 10
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.67 E-value=0.00084 Score=55.87 Aligned_cols=150 Identities=20% Similarity=0.205 Sum_probs=97.3
Q ss_pred CCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHH
Q 021456 102 DYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWH 181 (312)
Q Consensus 102 DYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
|=||++.|......++- ++ +..-.|+..++.-.+..+. +...+|+..+ ++.....
T Consensus 1 ~~pPl~~~~~~~~~~l~---G~---------------~~~~~~~~~~l~~~~~~~~-~y~i~r~~~~------~~~a~~~ 55 (159)
T PF13231_consen 1 DHPPLYFLLLALFFKLF---GD---------------SVWALRLFNILFSLLTLLL-IYLIARRLFG------RRAALIA 55 (159)
T ss_pred CCChHHHHHHHHHHHHh---Cc---------------CHHHHHHHHHHHHHHHHHH-HHHHHHHHCC------chHHHHH
Confidence 56999999988877742 11 2334688877777766552 2233333321 2224455
Q ss_pred HHHHHhccceeeeecccccchhhHHHHHHHHHHHHHh----CC---chHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhh
Q 021456 182 IAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILS----QR---ELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCL 254 (312)
Q Consensus 182 ~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~----~~---~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~ 254 (312)
.++..+.|..+.-.. ..+-|..++.+.+++++.+.+ ++ .++++++++++...|...+.+.|+.+.+++.+
T Consensus 56 ~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l~~~-- 132 (159)
T PF13231_consen 56 ALLLALSPMFIFYSA-SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYLLLS-- 132 (159)
T ss_pred HHHHHHhHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 667778887765444 677788888888888877663 32 36899999999999999999999988877755
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 255 RRKNPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 255 ~~~~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
+ +..++... ....++..++++.|.+
T Consensus 133 -~-~~~~~~~~-~~~~~~~~~~~~~p~l 157 (159)
T PF13231_consen 133 -R-RRLKRKIF-ILIAVLIALLVFLPWL 157 (159)
T ss_pred -h-HHHHhHHH-HHHHHHHHHHHHHHHH
Confidence 1 13444222 2224444455566653
No 11
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=97.53 E-value=0.0022 Score=58.72 Aligned_cols=173 Identities=20% Similarity=0.206 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHh----ccCCcccccccccccCCCccccCCCchHHHHHHHhh
Q 021456 40 CISVFALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEIT----LNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSYFHG 115 (312)
Q Consensus 40 ~~~~~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT----~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~llg 115 (312)
++.++++++|...--.|-++--+.+.|+++|.. -+|.+ .|=|..+-..+ ...|..+|||..-|..-.--
T Consensus 2 ~~~~~~~~~~~~~l~~p~~~v~de~~~~~~~~~--Y~~~~~~~~~~p~~~~~~~~-----~~~~~~~~p~~~~~~~~~~~ 74 (245)
T PF02366_consen 2 ILTLLSLLLRFWLLSLPNDGVFDEVHFDEFANR--YAEHTRFMDEHPPLGKLLFA-----LGAYLFGYPPLYYWISAIGF 74 (245)
T ss_pred HHHHHHHHHHHHHHhcchhhhhccccccHHHHH--HHhcceeeccCCcccchhhh-----hhhHHhcccchhhHHHhhhh
Confidence 355677888888766676777777778777421 11222 22233332221 22245677776655422111
Q ss_pred hhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhccceeeee
Q 021456 116 LFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILID 195 (312)
Q Consensus 116 ~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILID 195 (312)
-+.+.....-+|....++-.+... .+....++..+ ++.....+.++++++|.++...
T Consensus 75 -----------------~~~~~~~~~~~R~~~~l~~~~~~~-l~y~~~~~~~~-----s~~~al~aa~l~~~~~~~~~~s 131 (245)
T PF02366_consen 75 -----------------YYFGSVNYWAARLPSALFGALTVP-LVYLILRRLFG-----SRRAALLAALLLALDPSLIVQS 131 (245)
T ss_pred -----------------hhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC-----ChhHHHHHHHHHHHhhHHHHHH
Confidence 111223556789998888877644 33334443322 2233445667788899887643
Q ss_pred cccccchhhHHHHHHHHHHHHHhC------------CchHHHHHHHHHhcchhhhHHHHH
Q 021456 196 HGHFQYNCISLGLTVAAIAAILSQ------------RELLASCLFTLALSHKQMSVYYAP 243 (312)
Q Consensus 196 HgHFQYNgvmLGl~l~Ai~~l~~~------------~~llaAv~F~laL~fKqm~LY~AP 243 (312)
+. --=|+.++.++++|++++.+. ..++++++..+++..|...++..+
T Consensus 132 r~-~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~~~~~~l~gi~lGla~~~K~~~~~~~~ 190 (245)
T PF02366_consen 132 RY-ALLDSILLFFILLAIYCLLRWYRYQPFRRKWWLWLLLAGIALGLAILTKGPGLLLVL 190 (245)
T ss_pred HH-HhhHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHhchhHHHHHH
Confidence 32 223777788888888877655 247889999999999999887653
No 12
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.09 E-value=0.012 Score=60.02 Aligned_cols=176 Identities=16% Similarity=0.125 Sum_probs=108.0
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHhccCCcccccccccccCCCccccCCCchHHHHHHHh
Q 021456 35 GATFLCISVFALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSYFH 114 (312)
Q Consensus 35 ~~~~~~~~~~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~ll 114 (312)
+...+++++.+..+++. +++++.=- ++.==...|+.|+.+|...+ +..++.+ .. +.|.||+..|...+.
T Consensus 7 ~~~~~llll~~~~~~l~-~l~~~~~~-~~de~~~~~~~~~m~~s~~w--~~~~~~g-----~~--~~~kPPl~~Wl~a~~ 75 (535)
T COG1807 7 RLLLWLLLLIALALLLP-GLGSRPLW-DPDEARYAEIAREMLESGDW--FTPQLLG-----LP--YFEKPPLVYWLQALS 75 (535)
T ss_pred HHHHHHHHHHHHHHHhC-ccccCCCC-CCCchhHHHHHHHHHHcCCC--cceeeCC-----cc--ccCCCcHHHHHHHHH
Confidence 34555666666666655 13332200 00001348999998877655 3333321 22 249999999988865
Q ss_pred hhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhccceeee
Q 021456 115 GLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILI 194 (312)
Q Consensus 115 g~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILI 194 (312)
-++.. .+..-.|+...++=. +...+++.+.+...++ .....+.+.+++.|.++..
T Consensus 76 ~~lfG------------------~~~~~~rl~~~l~~~-~~~~l~y~l~k~l~~~------~~a~~aali~~~~p~~~~~ 130 (535)
T COG1807 76 YLLFG------------------VNEWSARLPSALAGA-LTALLVYWLAKRLFGR------LAALLAALILLLTPLFFLI 130 (535)
T ss_pred HHHcC------------------cchHHHHHHHHHHHH-HHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHH
Confidence 55322 022336888888877 4444555555544332 1234556778889999886
Q ss_pred ecccccchhhHHHHHHHHHHHHHhCC--------chHHHHHHHHHhcchhhhHHHHHHHHH
Q 021456 195 DHGHFQYNCISLGLTVAAIAAILSQR--------ELLASCLFTLALSHKQMSVYYAPAFFS 247 (312)
Q Consensus 195 DHgHFQYNgvmLGl~l~Ai~~l~~~~--------~llaAv~F~laL~fKqm~LY~AP~~F~ 247 (312)
.+.+- =|..+..++.+|++++.+.+ .+...+..+++...|-...++.|+++.
T Consensus 131 ~~~~~-~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~ 190 (535)
T COG1807 131 GRLAL-LDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILL 190 (535)
T ss_pred hHHHh-hhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 55543 46677888877777765322 267789999999999999999995333
No 13
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.90 E-value=0.027 Score=55.94 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=91.4
Q ss_pred CCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCC--CC----C
Q 021456 102 DYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHS--SR----K 175 (312)
Q Consensus 102 DYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~--~~----~ 175 (312)
.+||+.-+....+.+ ...++........+--+++|++..+- +....+.+.+..+. .+ .
T Consensus 57 h~~PLlL~l~~~l~~---------------~~~~~~~~~~~~~llf~~~Dl~~A~~-L~~i~~~~~~~~~~~~~~~~~~~ 120 (382)
T PF06728_consen 57 HQPPLLLALFSFLLK---------------SSPNSPNSPILISLLFILVDLLIAWL-LYRIAKSYQKQESKRQKSPNEKS 120 (382)
T ss_pred cCcCHHHHHHHHHHh---------------cccccccchHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhcCchhcc
Confidence 789998887765543 11223335556777888999998772 22222322221111 00 0
Q ss_pred cchHHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHh
Q 021456 176 NDCAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLG 251 (312)
Q Consensus 176 ~~~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~ 251 (312)
......++.+++||-.|+. .+--.=.++.-.+++.|++++.+|+...++++.+++.-...-++++.|+....+..
T Consensus 121 ~~~~lv~~~YLfNP~tIls-cva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~ 195 (382)
T PF06728_consen 121 SSPWLVAAFYLFNPLTILS-CVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLYS 195 (382)
T ss_pred cchHHHHHHHHHCHHHHHH-HHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 2345677899999999982 22222366677788899999999999999999999999999999999998877765
No 14
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=96.81 E-value=0.0037 Score=61.94 Aligned_cols=100 Identities=26% Similarity=0.259 Sum_probs=73.6
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHhhh
Q 021456 202 NCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRKNPIHGVAKLGLTVLGTFTVVWWPY 281 (312)
Q Consensus 202 NgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~~~~~rl~~lg~~Vi~tf~l~f~PF 281 (312)
+++-.-++-.|+....++|.++|+++|++|+..|-=.|-|||++++.+|..- ...+.+..+++. ++.-.+.=+||
T Consensus 158 D~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~----~~~~tl~~L~v~-~~vQilvg~PF 232 (429)
T KOG2762|consen 158 DPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNL----GPIGTLLHLAVC-ILVQILVGLPF 232 (429)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhc----cHHHHHHHHHHH-HHHHHHHcCch
Confidence 4666777788888999999999999999999999999999999999887541 123444455443 34445566799
Q ss_pred hhchhhHhhHhHhhcCCCCCchhhhhhc
Q 021456 282 LHSTDALLGVLSRLAPFERGIYEDYVAN 309 (312)
Q Consensus 282 l~~~~~~~qvl~RlFPf~RGL~ed~vAn 309 (312)
+- ..-.|-+++=|-++|-- +-||.=
T Consensus 233 Ll--~~p~~Yl~~aFDlGR~F-~~kWtV 257 (429)
T KOG2762|consen 233 LL--YFPSSYLTQAFDLGRVF-MYKWTV 257 (429)
T ss_pred Hh--hChHHHHhhhcccccce-eEEeee
Confidence 93 34456888889999853 344443
No 15
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.78 E-value=0.0038 Score=59.36 Aligned_cols=78 Identities=22% Similarity=0.227 Sum_probs=59.7
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhcc-CCCh-----hhHHHHHHHHHHHHH
Q 021456 202 NCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRR-KNPI-----HGVAKLGLTVLGTFT 275 (312)
Q Consensus 202 NgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~-~~~~-----~rl~~lg~~Vi~tf~ 275 (312)
||++-.+++++++++.++|...||+++.+++++|-=++.|+|++..|+..+..+. .... ++-++++++.++||+
T Consensus 8 Esl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~f~~~s~~tf~ 87 (259)
T PF05007_consen 8 ESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNGSFRSRLKRLLNPNRLKFGLISAITFA 87 (259)
T ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccchHHHHHHHhcCHhHhhhHHHHHHHHH
Confidence 7788888999999999999999999999999999999999999999987543210 0001 134556666666665
Q ss_pred HHHh
Q 021456 276 VVWW 279 (312)
Q Consensus 276 l~f~ 279 (312)
++-+
T Consensus 88 ~l~~ 91 (259)
T PF05007_consen 88 ALTL 91 (259)
T ss_pred HHHH
Confidence 5544
No 16
>PRK13375 pimE mannosyltransferase; Provisional
Probab=96.22 E-value=0.46 Score=48.10 Aligned_cols=168 Identities=14% Similarity=0.067 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCCcchhhhhHHHHHh-ccCCccccccc-cc-ccCCCccccCCCchHHHHHHHh
Q 021456 38 FLCISVFALLVRVAVSLHPYSGAGSPPKFGDYEAQRHWMEIT-LNLPVLEWYRN-ST-SNDLSYWGLDYPPLTAYQSYFH 114 (312)
Q Consensus 38 ~~~~~~~~~llR~~v~l~~ySG~~~pPm~gDfEaqRhWmeiT-~~LPi~~WY~~-~t-s~dl~yWgLDYPPl~AY~s~ll 114 (312)
...+++++++.|.+..+ .+.+ +.-+-|+|+-|.=-+.= +.-++-+.=+. .+ +.++-| -|||+.|-...=+
T Consensus 20 ~~~~~~~~~~~~~~~~~---~~~~-~~~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpF---tYPPfaallf~PL 92 (409)
T PRK13375 20 APLLLVLSVAARLAWTY---LAPN-GANFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPF---TYPPFAALVFYPL 92 (409)
T ss_pred HHHHHHHHHHHHHHHhc---ccCC-CCCCccHHHHHHhHHHHccCCcccCccccccCCCCCCCC---CCCcHHHHHHHHH
Confidence 34577888999998653 2111 12246999877632221 22245443222 22 223444 8999999998888
Q ss_pred hhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHH--HHHHHhcccee
Q 021456 115 GLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWH--IAMLLLNPCLI 192 (312)
Q Consensus 115 g~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~--~~~~llnP~LI 192 (312)
+.+ +.. ..+....+.-+..++-.+. .+.+....+. ... +... ....+..+.+-
T Consensus 93 alL----p~~-----------------~a~~l~~~~~~~al~~~v~-~~~r~l~~~~--~~~-~~a~~~~~~~l~~ePv~ 147 (409)
T PRK13375 93 HLL----PFG-----------------VVAFLWQLATIAALYGVVR-ISQRLLGGGA--GGH-RVAMLWTAVGIWLEPVR 147 (409)
T ss_pred Hhc----cHH-----------------HHHHHHHHHHHHHHHHHHH-HHHHHhcccc--cch-hHHHHHHHHHHHhHHHH
Confidence 862 111 0122222222333321111 1111211111 011 1111 11122233332
Q ss_pred eeec-ccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHH
Q 021456 193 LIDH-GHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYA 242 (312)
Q Consensus 193 LIDH-gHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~A 242 (312)
++ .+.|-|.+++.++++. +.++|...++++..++.+.|..+..+.
T Consensus 148 --~tl~~GQIN~lL~~Lv~~d---ll~~r~~~aGvliGLAaaIKlTPavf~ 193 (409)
T PRK13375 148 --STFDYGQINVFLMLAVLYA---VYSSRWWLSGLLVGLAAGVKLTPAITG 193 (409)
T ss_pred --HHHHhCcHHHHHHHHHHHH---HhcCCccHHHHHHHHHHHhhhhhHHHH
Confidence 22 2568899998888765 347888899999999999999988853
No 17
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=96.10 E-value=0.26 Score=51.59 Aligned_cols=165 Identities=13% Similarity=0.119 Sum_probs=88.9
Q ss_pred ccccccccccCCCccccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHH
Q 021456 85 LEWYRNSTSNDLSYWGLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAF 164 (312)
Q Consensus 85 ~~WY~~~ts~dl~yWgLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~ 164 (312)
.+|.. -+-+|..| .|-||+.-|.-.+.-++ +.. +..-+|+...++=++..+ .+..+.+
T Consensus 47 GdWlv-P~~~g~~y--~eKPPL~yWl~Als~~L---FG~---------------~~~a~RLpsaL~~~lt~l-lvy~lar 104 (552)
T PRK13279 47 GDWIV-PHFLGLRY--FEKPIAGYWINSIGQWL---FGD---------------NNFGVRFGSVFSTLLSAL-LVYWLAL 104 (552)
T ss_pred CCcCc-cccCCCcC--CCCCcHHHHHHHHHHHH---cCC---------------CcHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 36743 22334444 49999998776664442 211 123379988877665544 2333444
Q ss_pred HhhccCCCCCCcchHHHHHHHHhccceeeeecccccchhhHHHHHHHHH---HHHHhC-----C---chHHHHHHHHHhc
Q 021456 165 VYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAI---AAILSQ-----R---ELLASCLFTLALS 233 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai---~~l~~~-----~---~llaAv~F~laL~ 233 (312)
+..+++ .....+.++++.+|.+..+.|.+ .-+..+..++.+|+ +...++ + +++.++..++++.
T Consensus 105 rl~~~r-----~~AllAaLIlls~~~v~~~g~~a-~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~L 178 (552)
T PRK13279 105 RLWRDR-----RTALLAALIYLSLFLVYGIGTYA-VLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFM 178 (552)
T ss_pred HHhCCc-----HHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 443322 22344455666777766544333 12444444444444 333321 1 3455677889999
Q ss_pred chhhhHHHHHHH--HHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 234 HKQMSVYYAPAF--FSHLLGKCLRRKNPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 234 fKqm~LY~AP~~--F~yLL~~c~~~~~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
.|-......|.. +.+++.+ ++.+++...+...+++++++.+|+.
T Consensus 179 TKG~ial~lP~l~il~~ll~~-----rr~~~ll~~~~l~llvalli~lPW~ 224 (552)
T PRK13279 179 TKGFLALAVPVISVLPWVIWQ-----KRWKELLIYGPLAVLSAVLVSLPWA 224 (552)
T ss_pred hcchHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997665566633 3344332 2355555555555556666777876
No 18
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=95.15 E-value=0.067 Score=52.77 Aligned_cols=220 Identities=18% Similarity=0.191 Sum_probs=128.8
Q ss_pred ceecccCCcchHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCCcchhhhhHHHHHhccCCcccccccccccCCCccccCCC
Q 021456 26 WWWLTHKGIGATFLCISVFALLVRVAVSL-HPYSGAGSPPKFGDYEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYP 104 (312)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~llR~~v~l-~~ySG~~~pPm~gDfEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYP 104 (312)
||..-.+.--.....+++++++.|+++-. |-.-.....-.|||.+-|-- | .-++--.++.|.=.. =|-.|-
T Consensus 9 ~~~l~~k~~~~~~~~~llva~l~Ri~Lv~Yg~~hD~~~~v~~TDIDY~Vf----t---Daar~Vs~G~sPf~R-~TYRYt 80 (405)
T KOG3893|consen 9 EQRLGLKIAPTSFFTHLLVAFLARIALVFYGQLHDRQSAVPYTDIDYKVF----T---DAARQVSAGDSPFAR-ATYRYT 80 (405)
T ss_pred HHhhcceeccchhHHHHHHHHHHHHHHHHHhhhcchhccCCccccceeEe----e---hhhHHhhcCCChhhh-hhhccc
Confidence 33333344445666788999999999653 22222223344676542210 0 111111222221000 123788
Q ss_pred chHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHH
Q 021456 105 PLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAM 184 (312)
Q Consensus 105 Pl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (312)
|.-||.. -|+- -++++ +-+.--.++|+++.. +++ ++...+.. ++++.......
T Consensus 81 P~la~ll----------~pni------~~~p~-----~GK~Lf~~~Dll~a~---L~~--kLl~~~~i-~~~~a~~~~~f 133 (405)
T KOG3893|consen 81 PILAWLL----------TPNI------YLFPA-----WGKLLFAIFDLLIAT---LIY--KLLHMRSI-SRKQALIYASF 133 (405)
T ss_pred HHHHHHh----------ccce------ecCch-----HHHHHHHHHHHHHHH---HHH--HHHhhhhc-chhhhhHhhhh
Confidence 8877642 2221 12233 346667889988755 222 34332322 23333344556
Q ss_pred HHhccceeee-ecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhccC--CChh
Q 021456 185 LLLNPCLILI-DHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLRRK--NPIH 261 (312)
Q Consensus 185 ~llnP~LILI-DHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~~~--~~~~ 261 (312)
-++||-..+| -.|-- +|++-.+.++-++++.+++...||++..+++.+|--++.|.|+++.++.-.--+.. ..+.
T Consensus 134 WLlNPl~aiIStRGNa--esi~~~lvi~~lyllqK~~v~~A~l~~GlaIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~ 211 (405)
T KOG3893|consen 134 WLLNPLTAIISTRGNA--ESIVAFLVILTLYLLQKSEVFLAGLAHGLAIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLC 211 (405)
T ss_pred hhcCchheeeecCCch--HHHHHHHHHHHHHHHHHhHHHHHHHHhhheeeeEechHHhhhhhheEEecCCCCCcHHHHHH
Confidence 6889999887 34555 89999999999999999999999999999999999999999999988764211100 0111
Q ss_pred hH------HHHHHHHHHHHHHHHhhhh
Q 021456 262 GV------AKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 262 rl------~~lg~~Vi~tf~l~f~PFl 282 (312)
.+ +++.+.++.+|+.+-.-|.
T Consensus 212 sLL~~~k~l~~~~~tLtsf~~~~~~fY 238 (405)
T KOG3893|consen 212 SLLSINKQLCLILGTLTSFAACTWTFY 238 (405)
T ss_pred HHhccccchhhhHHHHHHHHHHHHHHH
Confidence 11 4555777777777733333
No 19
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=95.08 E-value=1 Score=45.69 Aligned_cols=160 Identities=18% Similarity=0.214 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcc----hhhhhHHHHHhccCCcccccccccccCCCccccCCCchHHHHHH
Q 021456 37 TFLCISVFALLVRVAVSLHPYSGAGSPPKFGD----YEAQRHWMEITLNLPVLEWYRNSTSNDLSYWGLDYPPLTAYQSY 112 (312)
Q Consensus 37 ~~~~~~~~~~llR~~v~l~~ySG~~~pPm~gD----fEaqRhWmeiT~~LPi~~WY~~~ts~dl~yWgLDYPPl~AY~s~ 112 (312)
.+.+++++++++|..- +| .|++..| =|..|+-+|.. +|-+ |+.| + ||+..|...
T Consensus 3 ~~~~i~l~al~lRl~~-Lg------~~~~~~DEa~ya~~a~~ml~~g------~~~~-----~p~~---h-~Pll~wl~A 60 (439)
T TIGR03663 3 LVILIVLFALLLRLFE-LG------LRVFHHDEAIHASFILKLLETG------VYSY-----DPAY---H-GPFLYHITA 60 (439)
T ss_pred HHHHHHHHHHHHHHHh-cC------CCCCCCCchhHHHHHHHHHhcC------CCCc-----CCCC---C-CCHHHHHHH
Confidence 4567888899999864 32 3677777 33334333222 2211 2322 2 677554433
Q ss_pred HhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhcccee
Q 021456 113 FHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLI 192 (312)
Q Consensus 113 llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LI 192 (312)
+. -..+.. +..-+|+...++=+++ +.+.+..++.. +++....+++++.++|..+
T Consensus 61 ~~---~~lFG~---------------se~a~RL~~aL~g~~v--~l~~~~~r~~~------~~~~al~AAllla~sp~~~ 114 (439)
T TIGR03663 61 AV---FHLFGI---------------SDATARLLPAVFGVLL--PLTAWLYRKRL------GDNEVLWAAVLLAFSPVMV 114 (439)
T ss_pred HH---HHHhCC---------------CHHHHHHHHHHHHHHH--HHHHHHHHHHc------CcHHHHHHHHHHHHhHHHH
Confidence 32 222321 2235799655554543 23333333332 1222344556677899987
Q ss_pred eeecccccchhhHHHHHHHHHHHHHh---CC----chHHHHHHHHHhcchhhhHHHHHHH
Q 021456 193 LIDHGHFQYNCISLGLTVAAIAAILS---QR----ELLASCLFTLALSHKQMSVYYAPAF 245 (312)
Q Consensus 193 LIDHgHFQYNgvmLGl~l~Ai~~l~~---~~----~llaAv~F~laL~fKqm~LY~AP~~ 245 (312)
..++. ..-|+.+..+.+++++++.+ ++ .+++++++++++..|...+.+.+.+
T Consensus 115 ~~sr~-~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gLa~ltKg~~~l~~~~~ 173 (439)
T TIGR03663 115 YYSRF-MRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALALAFTSKENAYLIILIF 173 (439)
T ss_pred HHHHH-HhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64443 22356777777777777653 21 3789999999999999866655443
No 20
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=95.05 E-value=0.35 Score=51.19 Aligned_cols=154 Identities=18% Similarity=0.193 Sum_probs=77.5
Q ss_pred CCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHH
Q 021456 103 YPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHI 182 (312)
Q Consensus 103 YPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~ 182 (312)
||||+.|.-.+++.+.. | . . ....++++++=++.-. +.+.+.|... ++....+..
T Consensus 4 YpPL~yyl~a~l~~l~g--~-~--------------~-~Ay~l~~~L~~~l~~~-~~Y~~~R~~~------~~~~A~l~a 58 (616)
T PF10131_consen 4 YPPLPYYLGALLSLLFG--N-P--------------I-VAYKLFIFLAFFLGGL-GMYFLGRRLG------RRKAAILAA 58 (616)
T ss_pred CCcHHHHHHHHHHHHhC--C-H--------------H-HHHHHHHHHHHHHHHH-HHHHHHHHhc------chhHHHHHH
Confidence 99999999999998641 1 1 1 1123444444222211 2222223221 122345566
Q ss_pred HHHHhccceeeeecccccchhh----HHHHHHHHHHHHHhCCc----hHHHHHHHHHhcchh--hhHHHHHHHHHHHHhh
Q 021456 183 AMLLLNPCLILIDHGHFQYNCI----SLGLTVAAIAAILSQRE----LLASCLFTLALSHKQ--MSVYYAPAFFSHLLGK 252 (312)
Q Consensus 183 ~~~llnP~LILIDHgHFQYNgv----mLGl~l~Ai~~l~~~~~----llaAv~F~laL~fKq--m~LY~AP~~F~yLL~~ 252 (312)
+++++.|..+...+.+..+=.. .+=+++++...+.+++. +..|+.+++.+-- | ..+....+++.+++-.
T Consensus 59 iLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~~lAl~~all~ls-Hll~~ll~~l~~~~~lLi~ 137 (616)
T PF10131_consen 59 ILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWILLALSMALLALS-HLLSTLLTGLALIVFLLIY 137 (616)
T ss_pred HHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence 7788899888776666643332 12223345554443332 4556666644433 5 6666667777777632
Q ss_pred hhccCCChhhHHHHHHHHHHHH--HHHHhhhh
Q 021456 253 CLRRKNPIHGVAKLGLTVLGTF--TVVWWPYL 282 (312)
Q Consensus 253 c~~~~~~~~rl~~lg~~Vi~tf--~l~f~PFl 282 (312)
-..+++....+.++..++++.. +.-++|++
T Consensus 138 ~~~~~~~~~~l~~~~a~~lgl~lsafwL~P~l 169 (616)
T PF10131_consen 138 LIQRKRFKRNLIKLVAIVLGLLLSAFWLLPAL 169 (616)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222233333332222222 34566987
No 21
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=94.69 E-value=0.43 Score=48.13 Aligned_cols=103 Identities=17% Similarity=0.023 Sum_probs=69.0
Q ss_pred HHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHH
Q 021456 147 VLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASC 226 (312)
Q Consensus 147 VI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv 226 (312)
.++=.+++..+++..+ ++.+++.. ++.......+.+++||++.=+.-.-|.=+++..-+++++++++.++|...+.+
T Consensus 63 li~Qal~la~~~~pl~--~lar~~~~-~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~ 139 (449)
T PF09852_consen 63 LIVQALLLALGAIPLY--RLARRRLL-SRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFIL 139 (449)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHcC-CcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3444445555444332 23333321 22334556778999999987644445559999899999999999999999999
Q ss_pred HHHHHhcchhhhHHHHHHHHHHHHhh
Q 021456 227 LFTLALSHKQMSVYYAPAFFSHLLGK 252 (312)
Q Consensus 227 ~F~laL~fKqm~LY~AP~~F~yLL~~ 252 (312)
+..++++.|--.-.+.-.+..+++-+
T Consensus 140 ~~ll~llvKEd~~l~v~~~gl~~~~~ 165 (449)
T PF09852_consen 140 WALLLLLVKEDLGLTVAGIGLYLLLR 165 (449)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99999999965555555555555543
No 22
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=94.13 E-value=0.65 Score=47.13 Aligned_cols=102 Identities=17% Similarity=0.214 Sum_probs=75.3
Q ss_pred HHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhc---
Q 021456 179 AWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLR--- 255 (312)
Q Consensus 179 ~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~--- 255 (312)
..+.++.+++|+=+.---.-= |+....+.+++++++.+++...++++|+++-...--++..+..+...+++....
T Consensus 145 ~~a~ll~~~~PasiF~sa~Ys--Eslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~ 222 (443)
T PF04188_consen 145 LLAALLFIFSPASIFLSAPYS--ESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLR 222 (443)
T ss_pred HHHHHHHHHccHHHHhhcCcc--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 345667889999654333333 788888899999999999999999999999999999999999888888875432
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 256 RKNPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 256 ~~~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
.+...++.++..+..++..+++.+||+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~~i~~pf~ 249 (443)
T PF04188_consen 223 QLRRQRRLVRALISAILSGLLIFLPFV 249 (443)
T ss_pred hcchHHHHHHHHHHhhhhhHHHHHHHH
Confidence 112233444444445555567788988
No 23
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=90.34 E-value=1.7 Score=44.38 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=61.1
Q ss_pred hhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHHHHHHHhcccee------eeecccccchhhHHHHHHHHHH
Q 021456 141 LLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWHIAMLLLNPCLI------LIDHGHFQYNCISLGLTVAAIA 214 (312)
Q Consensus 141 ~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~~~~~llnP~LI------LIDHgHFQYNgvmLGl~l~Ai~ 214 (312)
.++=+.++.+|+.++. ++..++++.+++ . ...+..+.++.|++. ..|+. .+.++.+++.
T Consensus 140 ~~~llNil~~~~si~l--iy~i~k~lf~~~-----~-a~~a~~l~~l~~~~~~y~~~~Ysd~~-------~l~~~~l~l~ 204 (483)
T TIGR03766 140 FFDVVNIVLVDLSALI--LYKAVKKVFNKK-----K-AFVALYLFVLLLALSPYILIPYTDTW-------VLPFVSLFLF 204 (483)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHhCch-----h-HHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHH
Confidence 3456778888877655 222344444322 2 334445556667753 24554 3444445544
Q ss_pred HHH---hCC--------chHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhh
Q 021456 215 AIL---SQR--------ELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCL 254 (312)
Q Consensus 215 ~l~---~~~--------~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~ 254 (312)
+.. +++ .++++++.+++-.+|+..+.+.+|++.+++-...
T Consensus 205 ~~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i~~~l~~~ 255 (483)
T TIGR03766 205 LYTVISKKTDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFIVLFLQLL 255 (483)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 322 211 1688999999999999999999999998886544
No 24
>PF14897 EpsG: EpsG family
Probab=87.97 E-value=18 Score=33.49 Aligned_cols=53 Identities=11% Similarity=0.195 Sum_probs=41.7
Q ss_pred cccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHH
Q 021456 196 HGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSH 248 (312)
Q Consensus 196 HgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~y 248 (312)
.....=+++..++.++|+..+.++|...+-++..+|..+-..++.+.|.++..
T Consensus 109 ~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~Saii~l~~~~l~ 161 (330)
T PF14897_consen 109 SFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYSAIIFLPLYFLS 161 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344478888889999999999998888888888888888888888885543
No 25
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=85.06 E-value=13 Score=35.15 Aligned_cols=80 Identities=20% Similarity=0.317 Sum_probs=52.4
Q ss_pred HHHHHHHHhccceeeeecccccchhh--HHHHHH--HHHHHHHhCCc--hHHHHHHHHHhcchhhhHHHHHHHH-HHHHh
Q 021456 179 AWHIAMLLLNPCLILIDHGHFQYNCI--SLGLTV--AAIAAILSQRE--LLASCLFTLALSHKQMSVYYAPAFF-SHLLG 251 (312)
Q Consensus 179 ~~~~~~~llnP~LILIDHgHFQYNgv--mLGl~l--~Ai~~l~~~~~--llaAv~F~laL~fKqm~LY~AP~~F-~yLL~ 251 (312)
....+.++.||-.+ ++.-|+|++. ++|+++ +|.+...+++. +.|+++-+++++.=|-..-..+... ++++.
T Consensus 80 ~l~~~~~~~~P~~~--~~lsy~~~s~~~~ls~~l~~la~~~~~k~~~~~~~~~~ll~~sl~~YQa~~~v~i~l~~~~~l~ 157 (319)
T PF14264_consen 80 VLFSLLFISSPFFL--ENLSYRFDSLPMALSLLLAVLAFYFLKKSKIGFLISILLLVLSLGIYQASINVFISLVLIILLL 157 (319)
T ss_pred HHHHHHHHHhHHHH--HHHHHHHccHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456688899876 7787777754 555544 44444444443 5789999999999998887777655 34445
Q ss_pred hhhccCCCh
Q 021456 252 KCLRRKNPI 260 (312)
Q Consensus 252 ~c~~~~~~~ 260 (312)
++.+.+.+.
T Consensus 158 ~~~~~~~~~ 166 (319)
T PF14264_consen 158 DLLKNKNPR 166 (319)
T ss_pred HHHhCCccH
Confidence 566555443
No 26
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=81.98 E-value=54 Score=35.78 Aligned_cols=114 Identities=19% Similarity=0.258 Sum_probs=62.0
Q ss_pred cc--cCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHH----HHHHHHHHHHHhhccCCC
Q 021456 99 WG--LDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLI----FFPAIFYFAFVYHSSCHS 172 (312)
Q Consensus 99 Wg--LDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~----~~pav~~~~~~~~~~~~~ 172 (312)
|| .||||+.-|..=+.+.+-+.+.|.+ .+.+++..+.++ .+ ++++..+++.++
T Consensus 81 ~G~~i~~~pl~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~PailG~L~vI-~vYl~~r~i~~~--- 139 (773)
T COG1287 81 PGSPIDFPPLFLYLTAALGLILGSIFPVS-----------------LETAALLFPAILGVLTVI-PVYLLGRRILGD--- 139 (773)
T ss_pred CCCCCCCCchHHHHHHHHHHHHHccCchH-----------------HHHHHHHhhHHHhhHHHH-HHHHHHHHHhcc---
Confidence 77 9999999888888887666666621 134444444332 22 233444544332
Q ss_pred CCCcchHHHHHHHHhccceee------eecccccchhhHHHHHHHHHHHHHh-----CCchHHHHHHHHHhcchhhh
Q 021456 173 SRKNDCAWHIAMLLLNPCLIL------IDHGHFQYNCISLGLTVAAIAAILS-----QRELLASCLFTLALSHKQMS 238 (312)
Q Consensus 173 ~~~~~~~~~~~~~llnP~LIL------IDHgHFQYNgvmLGl~l~Ai~~l~~-----~~~llaAv~F~laL~fKqm~ 238 (312)
..-..+++++.+.|+.+- -||-=+ |-+..-++++.+....+ .|...-+++.++++..=...
T Consensus 140 ---~~g~~aa~ll~~~p~~~~rt~~G~~d~~~~--~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~~~s 211 (773)
T COG1287 140 ---KTGLLAALLLALAPGYLSRTVAGFYDTDMF--ELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLLALA 211 (773)
T ss_pred ---hhhHHHHHHHHHhhHHHHHhhcCccCCCch--HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHHH
Confidence 224566677788888322 366554 55544444444443333 25555555555544443333
No 27
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=80.20 E-value=97 Score=33.95 Aligned_cols=136 Identities=19% Similarity=0.143 Sum_probs=78.2
Q ss_pred CCCchHHHHHHHhhhhhcccCCCceeeccCCCCCC-cchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHH
Q 021456 102 DYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYET-YVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAW 180 (312)
Q Consensus 102 DYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es-~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~ 180 (312)
+.|||-.-.--+.|+++.+ |+++--...+ ++.+ ..--..||.---..--++ .|. .+++-+..+ .+...
T Consensus 82 vHPPlgKmL~al~g~L~Gy-dG~f~f~~~g-~~~~~~~~y~~mR~f~a~lgsl~-vp~-~y~t~~~~~------~s~~a- 150 (723)
T KOG3359|consen 82 VHPPLGKMLIALVGYLAGY-DGSFDFQSIG-EYYPNGVPYVGMRLFSALLGSLT-VPL-AYLTLKELG------FSRLA- 150 (723)
T ss_pred cCchHHHHHHHHHHHHhCC-CCCccccCCC-ccCCCCCchHhHHHHHHHHHhHH-HHH-HHHHHHHhc------ccHHH-
Confidence 6799876655555555543 5555333222 2333 345667887544433332 222 223222211 11111
Q ss_pred HHHHHHhccceeeeeccccc------chhhHHHHHHHHHHHHHhC-----C---------chHHHHHHHHHhcchhhhHH
Q 021456 181 HIAMLLLNPCLILIDHGHFQ------YNCISLGLTVAAIAAILSQ-----R---------ELLASCLFTLALSHKQMSVY 240 (312)
Q Consensus 181 ~~~~~llnP~LILIDHgHFQ------YNgvmLGl~l~Ai~~l~~~-----~---------~llaAv~F~laL~fKqm~LY 240 (312)
.++.-.++++||+|=- -+++++.+...+++++.+= + -++.++.-++++..|-+++.
T Consensus 151 ----a~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgcaiSvK~vGlf 226 (723)
T KOG3359|consen 151 ----AALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCAISVKYVGLF 226 (723)
T ss_pred ----HHHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhheeehhhhhHH
Confidence 1122234557777632 2788999999999988742 2 15789999999999999998
Q ss_pred HHHHHHHHHHhh
Q 021456 241 YAPAFFSHLLGK 252 (312)
Q Consensus 241 ~AP~~F~yLL~~ 252 (312)
---....+...+
T Consensus 227 t~~~Vgl~~v~~ 238 (723)
T KOG3359|consen 227 TIALVGLYTVRE 238 (723)
T ss_pred HHHHHHHHHHHH
Confidence 877777666554
No 28
>PHA01514 O-antigen conversion protein C
Probab=78.92 E-value=74 Score=33.26 Aligned_cols=183 Identities=15% Similarity=0.226 Sum_probs=92.5
Q ss_pred cccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcch
Q 021456 99 WGLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDC 178 (312)
Q Consensus 99 WgLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~ 178 (312)
|+-|==|+..+..++++-=.+..| + + =+|.|++=+++-+ +.....+...++ +....
T Consensus 46 W~~~GRPlad~l~~~L~~g~~~~D-----i-------~-------PLpliLs~~~ls~-a~~~l~~~~f~~----~~~~~ 101 (485)
T PHA01514 46 WSGNGRPLSDFIFYIINFGTPIID-----A-------S-------PLPLMLGIVILAL-ALSCIREKLFGD----DYITA 101 (485)
T ss_pred hhhcCchHHHHHHHHHcCCCCccc-----c-------c-------cHHHHHHHHHHHH-HHHHHHHHHcCC----chHHH
Confidence 444545899999998874111111 1 0 2344555444433 222222333221 11222
Q ss_pred HHHHHHHHhccceeeeecccccchhhHHHHHHHHHH----HHHhCC---chHHHHHHHHHhcchhhhHHHHHH-HHHHHH
Q 021456 179 AWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIA----AILSQR---ELLASCLFTLALSHKQMSVYYAPA-FFSHLL 250 (312)
Q Consensus 179 ~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~----~l~~~~---~llaAv~F~laL~fKqm~LY~AP~-~F~yLL 250 (312)
..+.+.++.||-.+ -|..|+|+|....+.+.... +..+++ .+.++++=.+++|.=|-.+-.-.. ..+..+
T Consensus 102 ~L~~~~l~~NPffL--qNLSYrfDsl~Malsv~lsi~~~~l~~~~~~~~~~~~~il~~~~l~lYQ~s~nIfi~l~~~~il 179 (485)
T PHA01514 102 SLCFMMILANPFFI--ENLSYRYDSLTMCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIFLLAFII 179 (485)
T ss_pred HHHHHHHHhCHHHH--hhhhhccCcHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445677799765 88999999987777543222 223333 346666667788888887765554 334444
Q ss_pred hhhhccCCChhhHHHH---HHHHHHHHHHHHh----hhhhchhhHhhHhHhhcCCCCCchhhhhhc
Q 021456 251 GKCLRRKNPIHGVAKL---GLTVLGTFTVVWW----PYLHSTDALLGVLSRLAPFERGIYEDYVAN 309 (312)
Q Consensus 251 ~~c~~~~~~~~rl~~l---g~~Vi~tf~l~f~----PFl~~~~~~~qvl~RlFPf~RGL~ed~vAn 309 (312)
+.+.+++ .++...+- .+++.++..++.. |.+. .+.-.+-=+++-|++.|+.+--.+|
T Consensus 180 ~~~~~~~-~~~~i~k~~~~~~~~~i~~~llY~~iI~~~~~-~~~y~~~hs~ii~~~~~l~~~l~~n 243 (485)
T PHA01514 180 SDVVKKN-SISNITKNTASSVAGLIVGYFAYSYFIAKRLV-TGSYNIEHSKIIEINSSLFEGIISN 243 (485)
T ss_pred HHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcccccccccCCchhhHHHHHHh
Confidence 5555543 33333332 1222222222222 4431 1221222366778888888544444
No 29
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=78.47 E-value=53 Score=33.84 Aligned_cols=217 Identities=14% Similarity=0.159 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCCCcc----hh---hh------hHH-----HHHhccCCcccccccccccCCCcc
Q 021456 38 FLCISVFALLVRVAVSLHPYSGAGSPPKFGD----YE---AQ------RHW-----MEITLNLPVLEWYRNSTSNDLSYW 99 (312)
Q Consensus 38 ~~~~~~~~~llR~~v~l~~ySG~~~pPm~gD----fE---aq------RhW-----meiT~~LPi~~WY~~~ts~dl~yW 99 (312)
..++++..++.|+++....+|-.-+||+.-| +| +- ||| ++|+.|.+.. |.
T Consensus 25 Rl~v~lLq~i~~~~~~~~~~~~~~n~p~~~~~~s~~~~~~~~~~l~~l~~WDa~~FL~iae~gy~f----Eh-------- 92 (444)
T KOG2647|consen 25 RLIVLLLQFLANIAAIPDHTSDAFNLPRLSPRQSSFEDVVVKRLLGGLLSWDAEYFLFIAEHGYLF----EH-------- 92 (444)
T ss_pred HHHHHHHHHHHHHhccCcchhhhhcchhcccccchHHHHHHHHHHhccchhhHHHHHHHHhhchHH----hh--------
Confidence 3566777788898887778887778888766 22 22 344 4555554322 11
Q ss_pred ccCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchH
Q 021456 100 GLDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCA 179 (312)
Q Consensus 100 gLDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~ 179 (312)
++-.=|+.-++.-+.+ +..+|--..+. ....|=++.....+..+.-+...+- ...+... .+.+...
T Consensus 93 ~~AF~pl~P~~v~~~~---~~~~~~~~~l~---------~~~~~~i~~~~vn~~~f~la~~~Ly-ql~~~~~-~~~k~s~ 158 (444)
T KOG2647|consen 93 ELAFFPLFPFVVRLVT---EVLRPIEPVLS---------LRSILLISAVLVNIFFFMLAAVALY-QLTRIIL-HDPKISF 158 (444)
T ss_pred hHHhccccHHHHHHHH---Hhcccccchhh---------hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cChhHHh
Confidence 2233355555544444 22333322221 1222222333333333332221111 1111110 1222234
Q ss_pred HHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHHHHhhhhc----
Q 021456 180 WHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSHLLGKCLR---- 255 (312)
Q Consensus 180 ~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c~~---- 255 (312)
.+.+++.+||+=|--.-+== |++..-+.+.+++.+.+|+..-|+.+|+++=+..-+++.-++.+-.-..++.+.
T Consensus 159 ~a~liFcfnPAsIF~ts~YS--EsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~F~~~L~ 236 (444)
T KOG2647|consen 159 YAALLFCFNPASIFLTAGYS--ESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGFFIFSLT 236 (444)
T ss_pred hhhheeEecchHhhhhHHhh--HHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhcceeeeeehH
Confidence 45667889999887555544 788888899999999999999999999999999999988877654433333222
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 256 RKNPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 256 ~~~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
....-+++++.-+.-.++.+...+|+.
T Consensus 237 ~~~r~~~~~~~i~~~~l~~l~~~~p~~ 263 (444)
T KOG2647|consen 237 MLNRLRQLFKQIVSLFLSILTFLLPLA 263 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112344566666666666777888987
No 30
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=76.63 E-value=15 Score=33.11 Aligned_cols=59 Identities=22% Similarity=0.158 Sum_probs=46.1
Q ss_pred eeccccc--------chhhHHHHHHHHHHHHHhC-------Cc-hHHHHHHHHHhcchhhhHHHHHHHHHHHHhh
Q 021456 194 IDHGHFQ--------YNCISLGLTVAAIAAILSQ-------RE-LLASCLFTLALSHKQMSVYYAPAFFSHLLGK 252 (312)
Q Consensus 194 IDHgHFQ--------YNgvmLGl~l~Ai~~l~~~-------~~-llaAv~F~laL~fKqm~LY~AP~~F~yLL~~ 252 (312)
-|..+|| -|.++.+++++.+....++ |+ +++|.+..++++.-++.++..|++...+.-+
T Consensus 95 S~sfW~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~ 169 (178)
T PF11028_consen 95 SDSFWFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFK 169 (178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5777887 5777888888887776654 22 7889999999999999999999887655543
No 31
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=61.07 E-value=1.7e+02 Score=28.54 Aligned_cols=111 Identities=24% Similarity=0.324 Sum_probs=67.0
Q ss_pred CCchHHHHHHHhh-hhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHH
Q 021456 103 YPPLTAYQSYFHG-LFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWH 181 (312)
Q Consensus 103 YPPl~AY~s~llg-~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
|||+. |.--.+| ++|+.++.+. ......+|+..++.-.++.+-|+ +..+. .+ ..
T Consensus 95 y~p~~-Ylp~alGi~ig~ll~l~~-----------~~~~~l~Rl~nll~~~~l~~~Ai-----~~~p~-------~k-~l 149 (389)
T PF09913_consen 95 YPPLY-YLPQALGIWIGRLLGLSV-----------LVMYYLGRLFNLLLYALLVYLAI-----KLAPR-------GK-WL 149 (389)
T ss_pred CCcHh-hHHHHHHHHHHHHhCCCH-----------HHHHHHHHHHHHHHHHHHHHHHH-----HHcch-------hH-HH
Confidence 88875 4444443 5666665442 23557889888777666555332 22211 12 33
Q ss_pred HHHHHhccceeeeecccccchhhHHHHHHHHHHHHHh----CC-----chHHHHHHHHHhcchhhhH
Q 021456 182 IAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILS----QR-----ELLASCLFTLALSHKQMSV 239 (312)
Q Consensus 182 ~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~----~~-----~llaAv~F~laL~fKqm~L 239 (312)
++.+.+.|-.+-. -.-+.|+++..++..+.++.+.+ ++ .+..++...++..-|..++
T Consensus 150 ~~~i~l~Pm~~~~-~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~ 215 (389)
T PF09913_consen 150 LALIALLPMTLFQ-AASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYI 215 (389)
T ss_pred HHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677754421 24677899999998888887765 11 2566777777788893333
No 32
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=60.14 E-value=72 Score=34.79 Aligned_cols=134 Identities=19% Similarity=0.130 Sum_probs=78.2
Q ss_pred CCchHHHHHHHhhhhhcccCCCceeeccC-CCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHHH
Q 021456 103 YPPLTAYQSYFHGLFLRFFDPDSVSLFTS-RGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAWH 181 (312)
Q Consensus 103 YPPl~AY~s~llg~ia~~~~p~~v~l~~s-rg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
+|||-++.--+.|.++. .||++-..... ..|-....-+.||...-+.-.++ +.+++++-+..+ .+....
T Consensus 72 HPPL~kml~al~~~L~g-~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~--vpl~y~t~r~~~------~s~l~~- 141 (699)
T COG1928 72 HPPLGKMLIALVGGLEG-YDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLT--VPLVYLIARRIG------YSRLVA- 141 (699)
T ss_pred CCcHHHHHHHhhhhhhc-cCCCcccccCCcccccCCCChHHHHHHHHHHHhHH--HHHHHHHHHHhc------chHHHH-
Confidence 69999988877777776 35554322111 23333445677998776554443 223333222211 111111
Q ss_pred HHHHHhccceeeeeccccc------chhhHHHHHHHHHHHHHh---CC---------chHHHHHHHHHhcchhhhHHHHH
Q 021456 182 IAMLLLNPCLILIDHGHFQ------YNCISLGLTVAAIAAILS---QR---------ELLASCLFTLALSHKQMSVYYAP 243 (312)
Q Consensus 182 ~~~~llnP~LILIDHgHFQ------YNgvmLGl~l~Ai~~l~~---~~---------~llaAv~F~laL~fKqm~LY~AP 243 (312)
++.-.++++||.|.- -|++++.+.+.+++++.+ .+ -++.++.+.+++..|-.++.-.-
T Consensus 142 ----~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGcaiS~KwvGlft~~ 217 (699)
T COG1928 142 ----ALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGCAISVKWVGLFTTG 217 (699)
T ss_pred ----HHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeeeEEEeeehhHHHHH
Confidence 111223457887763 378888888888888763 22 26678899999999999877655
Q ss_pred HHHHHHH
Q 021456 244 AFFSHLL 250 (312)
Q Consensus 244 ~~F~yLL 250 (312)
.+..+-.
T Consensus 218 ~vgl~~v 224 (699)
T COG1928 218 VVGLLAV 224 (699)
T ss_pred HHHHHHH
Confidence 5544433
No 33
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=51.30 E-value=1.5e+02 Score=29.52 Aligned_cols=90 Identities=19% Similarity=0.263 Sum_probs=39.1
Q ss_pred cCCCchHHHHHHHhhhhhcccCCCceeeccCCCCCCcchhhhhhHHHHHHhHHHHHHHHHHHHHHhhccCCCCCCcchHH
Q 021456 101 LDYPPLTAYQSYFHGLFLRFFDPDSVSLFTSRGYETYVGKLLMRWTVLSSDTLIFFPAIFYFAFVYHSSCHSSRKNDCAW 180 (312)
Q Consensus 101 LDYPPl~AY~s~llg~ia~~~~p~~v~l~~srg~es~~~k~FmR~tVI~sDll~~~pav~~~~~~~~~~~~~~~~~~~~~ 180 (312)
.+|||+..+......++.....+ +.+ ..+..=++.+++=+.+ +| +.++.|+.. ++..-..
T Consensus 68 i~~~pl~~~l~~~~~~~~~~~~~--~~l----------~~v~~~~ppvl~~L~v-i~-~y~~~~~~~------~~~~Gl~ 127 (483)
T PF02516_consen 68 IDWPPLFPYLTAAFYAILGGFGP--VSL----------YEVAFWLPPVLGALTV-IP-VYLLGRRLG------GRKAGLL 127 (483)
T ss_dssp --TT-HHHHHHHHHHHS-SS-HH----------------HHHHHHHHHHGGGGH-HH-HHHHHHHTT-------HHHHHH
T ss_pred cCcccHHHHHHHHHHHHHHHhcc--hhH----------HHHHHHHHHHHHHHHH-HH-HHHHHHHhC------CCchHHH
Confidence 58999999985555443322211 111 1112233445444443 33 222333221 2222345
Q ss_pred HHHHHHhccceee------eecccccchhhHHHHHHHH
Q 021456 181 HIAMLLLNPCLIL------IDHGHFQYNCISLGLTVAA 212 (312)
Q Consensus 181 ~~~~~llnP~LIL------IDHgHFQYNgvmLGl~l~A 212 (312)
+++++.+.|+.+- .||==+ |-++..+.++.
T Consensus 128 aA~l~a~~p~~l~RT~~G~~D~~~~--~~~f~~l~~~~ 163 (483)
T PF02516_consen 128 AAFLLAISPGYLSRTMAGFYDHHML--ELFFPLLIIYF 163 (483)
T ss_dssp HHHHHTTSHHHHHTSSTT--SGGGG--TTHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHhcCCCcccchH--HHHHHHHHHHH
Confidence 6677888999443 466555 44444444333
No 34
>COG3463 Predicted membrane protein [Function unknown]
Probab=46.82 E-value=2.9e+02 Score=28.79 Aligned_cols=71 Identities=17% Similarity=0.097 Sum_probs=52.9
Q ss_pred hHHHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHHHH
Q 021456 178 CAWHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFFSH 248 (312)
Q Consensus 178 ~~~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F~y 248 (312)
......++++||.+.=|----|---.+..-++++|.+++.+|++.+..+.-++.+..|-+....+--+-+.
T Consensus 119 al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~lvlIl~tk~~a~liiIsl~i~ 189 (458)
T COG3463 119 ALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFLVLILLTKEDAFLIIISLLIW 189 (458)
T ss_pred HHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 44556789999997654333232267777788999999999999999999999999999955554444333
No 35
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=46.82 E-value=1.6e+02 Score=31.72 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=55.7
Q ss_pred HHHHHHHHhccceeee-ecccccchhh-HHHHHHHHHHHHHhCC-c--hHHHHHHHHHhcchhhhHHHHHHHHHHHHhhh
Q 021456 179 AWHIAMLLLNPCLILI-DHGHFQYNCI-SLGLTVAAIAAILSQR-E--LLASCLFTLALSHKQMSVYYAPAFFSHLLGKC 253 (312)
Q Consensus 179 ~~~~~~~llnP~LILI-DHgHFQYNgv-mLGl~l~Ai~~l~~~~-~--llaAv~F~laL~fKqm~LY~AP~~F~yLL~~c 253 (312)
....+++.++=-++.- =|.+| -|++ ++=++++++-.+.++| . +..++..++..|| -++.+.+...+.|.+-++
T Consensus 124 ~i~s~~Yafsg~~~~~~~~~~f-ld~~i~lPL~llgie~~~~~~k~~~~~~~~~l~~i~nf-Yf~ym~~if~~iY~~~r~ 201 (843)
T PF09586_consen 124 LIGSLLYAFSGYVIYYSFNIMF-LDAMILLPLLLLGIERLLKEKKWWLFIISLALALISNF-YFAYMICIFLVIYFLIRY 201 (843)
T ss_pred HHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 3445566665434331 23344 4544 4556778887666544 3 2334444444444 333444455556666554
Q ss_pred h-cc-C---CChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 254 L-RR-K---NPIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 254 ~-~~-~---~~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
+ +. + ..+.+++.-+++.++..++.++|.+
T Consensus 202 ~~~~~k~~~~~~~~~~~~~ilg~~lsa~~llP~~ 235 (843)
T PF09586_consen 202 FFKNWKNFFKKILRFIGSSILGVGLSAFLLLPTI 235 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 21 1 1245666677777788888999998
No 36
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=40.20 E-value=9.1 Score=27.52 Aligned_cols=14 Identities=71% Similarity=0.921 Sum_probs=10.8
Q ss_pred Cchhhhhhhccccc
Q 021456 2 GKKKEKKKINEKVD 15 (312)
Q Consensus 2 ~~~~~~~~~~~~~~ 15 (312)
||||+||.+.++.+
T Consensus 34 gKkk~KKeie~ke~ 47 (49)
T PF11044_consen 34 GKKKEKKEIERKED 47 (49)
T ss_pred hhhhhHHHHHHHhh
Confidence 68899988877654
No 37
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=28.99 E-value=1.4e+02 Score=24.22 Aligned_cols=12 Identities=42% Similarity=0.351 Sum_probs=6.8
Q ss_pred CCchhhhhhhcc
Q 021456 1 MGKKKEKKKINE 12 (312)
Q Consensus 1 ~~~~~~~~~~~~ 12 (312)
|+|-|.+||...
T Consensus 1 MPkSk~rKk~~~ 12 (87)
T PF06781_consen 1 MPKSKVRKKAAY 12 (87)
T ss_pred CCCccccccccC
Confidence 677665555443
No 38
>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function.
Probab=27.95 E-value=30 Score=28.09 Aligned_cols=14 Identities=36% Similarity=0.700 Sum_probs=11.9
Q ss_pred cchhhhhHHHHHhc
Q 021456 67 GDYEAQRHWMEITL 80 (312)
Q Consensus 67 gDfEaqRhWmeiT~ 80 (312)
+|++.||.||--+.
T Consensus 66 ~~i~~Hr~wM~rsy 79 (103)
T PF10067_consen 66 GRIAAHRRWMIRSY 79 (103)
T ss_pred CCHHHHHHHHHHHH
Confidence 89999999996553
No 39
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=26.79 E-value=6e+02 Score=25.99 Aligned_cols=74 Identities=24% Similarity=0.207 Sum_probs=46.0
Q ss_pred HHHHHHHhccceeeeecccccchhhHHHHHHHHHHHHHhCCchHHHHHHHHHhcchhhhHHHHHHHH--HHHHhhhhccC
Q 021456 180 WHIAMLLLNPCLILIDHGHFQYNCISLGLTVAAIAAILSQRELLASCLFTLALSHKQMSVYYAPAFF--SHLLGKCLRRK 257 (312)
Q Consensus 180 ~~~~~~llnP~LILIDHgHFQYNgvmLGl~l~Ai~~l~~~~~llaAv~F~laL~fKqm~LY~AP~~F--~yLL~~c~~~~ 257 (312)
++++++++||--|+--=+-= =-.+--..+..+++++.+|+..++|+.-+++- |+.+|=++.++ ..+|++|..+.
T Consensus 148 ~v~l~Yl~NPlTilSCi~~S-t~~I~N~~v~~~ly~av~~~~~l~a~~la~~t---~~s~yp~~L~~P~l~~L~~~~~~~ 223 (388)
T KOG2552|consen 148 LVALLYLFNPLTILSCIGLS-TTVIENFAVAVSLYGAVTGRVPLAAFGLAIAT---HLSLYPATLTIPLLFLLGYGLDAP 223 (388)
T ss_pred HHHHHHHhCceeeeeecccc-chHHHHHHHHHHHHHHHhcchHHHHHHHHHHH---hcccchHHHHHHHHHHHhccccCc
Confidence 57788999999988211100 01112234567888889999999998888774 44555444443 23567776544
No 40
>PRK10649 hypothetical protein; Provisional
Probab=25.73 E-value=6.3e+02 Score=26.75 Aligned_cols=29 Identities=24% Similarity=0.073 Sum_probs=20.1
Q ss_pred HHHHHHHHhcchhhhHHHHHHHHHHHHhh
Q 021456 224 ASCLFTLALSHKQMSVYYAPAFFSHLLGK 252 (312)
Q Consensus 224 aAv~F~laL~fKqm~LY~AP~~F~yLL~~ 252 (312)
|+=+++.-+..+...+-.+|.++++++.+
T Consensus 112 a~e~ls~~~~~~~~l~~~l~~l~~~~~~~ 140 (577)
T PRK10649 112 ASEYLSQYFSLKIVLIALAYTAVAVLLWT 140 (577)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556666777878888888877666653
No 41
>PRK12287 tqsA pheromone autoinducer 2 transporter; Reviewed
Probab=23.50 E-value=3.2e+02 Score=26.57 Aligned_cols=49 Identities=10% Similarity=0.092 Sum_probs=25.6
Q ss_pred HHHHHhcchhhhHHHHHHHHHHHHhhhhcc------CCChhhHHHHHHHHHHHHH
Q 021456 227 LFTLALSHKQMSVYYAPAFFSHLLGKCLRR------KNPIHGVAKLGLTVLGTFT 275 (312)
Q Consensus 227 ~F~laL~fKqm~LY~AP~~F~yLL~~c~~~------~~~~~rl~~lg~~Vi~tf~ 275 (312)
...+....|...=++.|.++..++...+++ +.++.|.+...++.+..++
T Consensus 20 ~~~~~~~l~~~~~il~P~~~A~~ia~ll~P~v~~L~r~~~~r~la~~lv~l~~~~ 74 (344)
T PRK12287 20 LVIILCGIRFAADIIVPFILALFIAVVLNPLVQHMVRWRVPRVLAVSLLMTIIVM 74 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 334444566666777776666555443221 2345665555554444443
No 42
>PHA03234 DNA packaging protein UL33; Provisional
Probab=23.44 E-value=64 Score=31.33 Aligned_cols=24 Identities=8% Similarity=0.029 Sum_probs=21.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhhh
Q 021456 259 PIHGVAKLGLTVLGTFTVVWWPYL 282 (312)
Q Consensus 259 ~~~rl~~lg~~Vi~tf~l~f~PFl 282 (312)
.-+|.++.-++++++|+++|+|+-
T Consensus 231 ~~~k~~k~i~~vv~vF~iCWlPy~ 254 (338)
T PHA03234 231 KHKKTLFFIRILILSFLCIQIPNI 254 (338)
T ss_pred hhhhhhhHHHHHHHHHHHHHhHHH
Confidence 356889999999999999999995
No 43
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=23.28 E-value=12 Score=39.20 Aligned_cols=41 Identities=32% Similarity=0.510 Sum_probs=27.6
Q ss_pred CCCCCcchhhhhHHH-HHhccCCcccccccccccCCCccccCCCc
Q 021456 62 SPPKFGDYEAQRHWM-EITLNLPVLEWYRNSTSNDLSYWGLDYPP 105 (312)
Q Consensus 62 ~pPm~gDfEaqRhWm-eiT~~LPi~~WY~~~ts~dl~yWgLDYPP 105 (312)
+|=.|+..|.||||= ..|..|.+-+=|.| +.|+|||+|=--
T Consensus 491 KPWIFtEIkeqq~wD~sSteRldiL~df~n---yGLeHWGSDt~G 532 (614)
T KOG2333|consen 491 KPWIFTEIKEQQHWDISSTERLDILKDFCN---YGLEHWGSDTKG 532 (614)
T ss_pred cchHhhhhhhhhcCCccchHHHHHHHHHHh---hhhhhcCCcccc
Confidence 344689999999994 33444455555553 689999999433
No 44
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=21.78 E-value=47 Score=28.67 Aligned_cols=19 Identities=32% Similarity=0.604 Sum_probs=15.7
Q ss_pred hhhhHHHHHhcc--CCccccc
Q 021456 70 EAQRHWMEITLN--LPVLEWY 88 (312)
Q Consensus 70 EaqRhWmeiT~~--LPi~~WY 88 (312)
|..+||.|.-.| -|+.+|.
T Consensus 113 ~~~~hW~~m~~~pr~~ia~WH 133 (135)
T cd08692 113 EAVEQWKDTIANPEKVVTKWH 133 (135)
T ss_pred hhhhhHHHHHhCCCCeeeEee
Confidence 677999999765 5999995
No 45
>PLN02816 mannosyltransferase
Probab=21.47 E-value=9.8e+02 Score=25.33 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=12.7
Q ss_pred hhhHHHHHHHHHHHH
Q 021456 202 NCISLGLTVAAIAAI 216 (312)
Q Consensus 202 NgvmLGl~l~Ai~~l 216 (312)
|++-+.++++|++..
T Consensus 172 NslEt~Lt~lAL~~w 186 (546)
T PLN02816 172 NCLETVLTIMGLYYW 186 (546)
T ss_pred hHHHHHHHHHHHHHh
Confidence 888899988998874
Done!