Query 021459
Match_columns 312
No_of_seqs 316 out of 1550
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 04:27:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ery_A WD repeat-containing pr 100.0 1.3E-54 4.4E-59 358.7 44.1 300 12-312 13-312 (312)
2 1got_B GT-beta; complex (GTP-b 100.0 2E-51 6.9E-56 343.6 45.4 294 11-309 44-340 (340)
3 1vyh_C Platelet-activating fac 100.0 4.2E-52 1.4E-56 356.1 41.9 289 15-310 101-409 (410)
4 2ynn_A Coatomer subunit beta'; 100.0 3E-51 1E-55 337.3 43.8 292 12-310 3-300 (304)
5 3ow8_A WD repeat-containing pr 100.0 1.5E-50 5.1E-55 335.4 41.1 290 14-310 24-319 (321)
6 2pbi_B Guanine nucleotide-bind 100.0 5.7E-50 1.9E-54 336.4 43.6 293 13-309 55-354 (354)
7 3iz6_a 40S ribosomal protein R 100.0 2.7E-50 9.3E-55 341.7 31.9 297 12-311 56-374 (380)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.5E-48 1.5E-52 323.9 40.8 295 11-311 4-334 (345)
9 4g56_B MGC81050 protein; prote 100.0 1.9E-48 6.5E-53 327.5 36.1 287 19-311 39-342 (357)
10 3frx_A Guanine nucleotide-bind 100.0 5.1E-47 1.7E-51 314.1 43.8 290 12-311 7-316 (319)
11 4gqb_B Methylosome protein 50; 100.0 3.4E-48 1.2E-52 323.7 36.4 285 19-311 27-330 (344)
12 1erj_A Transcriptional repress 100.0 9.3E-47 3.2E-51 321.4 43.4 284 20-311 62-388 (393)
13 2hes_X YDR267CP; beta-propelle 100.0 8.8E-47 3E-51 314.1 38.5 291 12-311 4-327 (330)
14 1nr0_A Actin interacting prote 100.0 2.1E-46 7.2E-51 336.3 42.1 291 13-311 50-354 (611)
15 1nr0_A Actin interacting prote 100.0 2.1E-46 7.1E-51 336.4 42.0 290 15-311 140-566 (611)
16 2xzm_R RACK1; ribosome, transl 100.0 1.2E-45 4.1E-50 309.0 42.9 289 12-311 11-339 (343)
17 3zwl_B Eukaryotic translation 100.0 3.5E-44 1.2E-48 302.2 44.5 292 11-311 21-345 (369)
18 2ymu_A WD-40 repeat protein; u 100.0 3.1E-44 1.1E-48 320.4 42.8 283 14-309 295-577 (577)
19 2ynn_A Coatomer subunit beta'; 100.0 1E-44 3.5E-49 298.3 36.7 253 55-311 4-258 (304)
20 4aow_A Guanine nucleotide-bind 100.0 2.5E-43 8.5E-48 294.1 44.7 290 13-311 29-336 (340)
21 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-43 5.5E-48 291.8 41.3 289 8-311 4-295 (313)
22 3ei3_B DNA damage-binding prot 100.0 1.5E-44 5E-49 306.8 35.8 291 11-311 62-381 (383)
23 3dm0_A Maltose-binding peripla 100.0 6.8E-44 2.3E-48 324.7 42.1 290 14-312 374-693 (694)
24 3k26_A Polycomb protein EED; W 100.0 3E-44 1E-48 302.3 35.5 298 7-312 3-366 (366)
25 1sq9_A Antiviral protein SKI8; 100.0 7E-44 2.4E-48 303.8 37.0 292 12-311 6-394 (397)
26 1gxr_A ESG1, transducin-like e 100.0 1.1E-42 3.8E-47 289.5 41.0 283 18-310 47-335 (337)
27 1k8k_C P40, ARP2/3 complex 41 100.0 3.8E-43 1.3E-47 296.5 38.1 287 18-311 4-360 (372)
28 2ymu_A WD-40 repeat protein; u 100.0 1.8E-42 6.3E-47 308.9 43.9 285 13-310 253-537 (577)
29 3i2n_A WD repeat-containing pr 100.0 1.2E-43 4.1E-48 297.8 34.2 291 15-312 11-353 (357)
30 3ow8_A WD repeat-containing pr 100.0 8.2E-43 2.8E-47 289.0 38.3 248 15-267 73-320 (321)
31 1r5m_A SIR4-interacting protei 100.0 3.7E-42 1.3E-46 295.1 40.7 283 20-311 43-424 (425)
32 3gre_A Serine/threonine-protei 100.0 2E-43 6.9E-48 304.9 32.6 288 14-309 54-437 (437)
33 1vyh_C Platelet-activating fac 100.0 6E-43 2E-47 299.4 35.0 248 14-266 142-409 (410)
34 3mkq_A Coatomer beta'-subunit; 100.0 4.9E-42 1.7E-46 317.7 41.7 292 13-310 4-300 (814)
35 3vl1_A 26S proteasome regulato 100.0 2.1E-42 7.2E-47 296.8 35.6 283 23-311 98-418 (420)
36 2pm9_A Protein WEB1, protein t 100.0 1.5E-43 5.1E-48 303.5 28.4 287 20-311 65-413 (416)
37 3dwl_C Actin-related protein 2 100.0 4.9E-44 1.7E-48 302.8 23.4 285 18-310 7-377 (377)
38 4e54_B DNA damage-binding prot 100.0 1.7E-43 5.8E-48 305.2 27.1 294 11-311 108-429 (435)
39 4a11_B DNA excision repair pro 100.0 9E-42 3.1E-46 291.3 35.9 295 13-311 34-364 (408)
40 1got_B GT-beta; complex (GTP-b 100.0 4.3E-41 1.5E-45 281.0 38.1 247 14-265 89-340 (340)
41 2pm9_A Protein WEB1, protein t 100.0 2.6E-43 8.9E-48 302.0 24.0 287 21-311 11-336 (416)
42 4gga_A P55CDC, cell division c 100.0 3.1E-40 1.1E-44 283.6 41.6 276 24-310 107-393 (420)
43 4gqb_B Methylosome protein 50; 100.0 3.6E-41 1.2E-45 281.3 34.6 246 20-271 80-334 (344)
44 1yfq_A Cell cycle arrest prote 100.0 2.2E-41 7.7E-46 282.5 33.3 279 15-301 4-314 (342)
45 3frx_A Guanine nucleotide-bind 100.0 9.9E-41 3.4E-45 276.4 36.7 250 14-268 57-317 (319)
46 3dw8_B Serine/threonine-protei 100.0 2.1E-41 7.3E-46 292.8 33.3 286 20-310 26-444 (447)
47 4ggc_A P55CDC, cell division c 100.0 1.2E-39 4.1E-44 269.3 42.1 293 7-310 6-313 (318)
48 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-42 7.7E-47 302.5 25.7 286 21-312 132-517 (524)
49 4aez_A CDC20, WD repeat-contai 100.0 1.6E-40 5.4E-45 283.8 36.5 280 20-311 89-379 (401)
50 4h5i_A Guanine nucleotide-exch 100.0 2.5E-41 8.5E-46 284.9 31.0 280 22-310 14-341 (365)
51 2hes_X YDR267CP; beta-propelle 100.0 1.7E-40 6E-45 276.2 35.6 251 15-268 49-328 (330)
52 1gxr_A ESG1, transducin-like e 100.0 2.1E-40 7.3E-45 275.7 35.8 282 21-311 8-295 (337)
53 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-40 6.6E-45 319.7 40.7 288 16-310 609-911 (1249)
54 3vl1_A 26S proteasome regulato 100.0 4.1E-41 1.4E-45 288.8 31.7 280 24-311 58-364 (420)
55 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-40 6E-45 277.8 34.6 255 18-275 57-342 (345)
56 1pgu_A Actin interacting prote 100.0 1.8E-40 6.2E-45 297.8 36.8 286 13-310 54-364 (615)
57 3v7d_B Cell division control p 100.0 8.3E-40 2.8E-44 284.4 39.8 282 14-311 113-420 (464)
58 2pm7_B Protein transport prote 100.0 2.1E-40 7.2E-45 271.7 33.4 248 59-311 4-284 (297)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.4E-39 4.6E-44 281.7 39.4 282 13-311 150-441 (445)
60 2pbi_B Guanine nucleotide-bind 100.0 1.1E-39 3.7E-44 273.9 37.5 248 14-265 98-354 (354)
61 3v7d_B Cell division control p 100.0 4E-39 1.4E-43 280.1 42.0 284 13-310 153-461 (464)
62 3mmy_A MRNA export factor; mRN 100.0 7E-40 2.4E-44 275.7 35.9 289 8-301 25-337 (368)
63 3f3f_A Nucleoporin SEH1; struc 100.0 2.7E-40 9.1E-45 275.9 32.6 290 16-311 5-336 (351)
64 2pm7_B Protein transport prote 100.0 4.2E-40 1.4E-44 269.9 33.1 248 16-267 3-284 (297)
65 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-40 2.5E-44 282.6 36.0 274 17-311 128-413 (435)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.2E-39 3.1E-43 276.5 40.3 278 14-311 110-390 (445)
67 1erj_A Transcriptional repress 100.0 2.4E-39 8E-44 275.7 35.8 243 23-268 124-389 (393)
68 4ery_A WD repeat-containing pr 100.0 1.6E-38 5.5E-43 262.3 38.7 250 14-267 57-311 (312)
69 1pgu_A Actin interacting prote 100.0 1E-38 3.6E-43 286.4 40.5 290 12-311 193-613 (615)
70 2xzm_R RACK1; ribosome, transl 100.0 3.7E-39 1.3E-43 269.6 34.6 249 14-269 68-341 (343)
71 3bg1_A Protein SEC13 homolog; 100.0 2.8E-40 9.6E-45 273.3 27.0 247 17-267 8-292 (316)
72 4g56_B MGC81050 protein; prote 100.0 5.9E-40 2E-44 275.8 27.6 279 24-311 7-300 (357)
73 3bg1_A Protein SEC13 homolog; 100.0 7.1E-40 2.4E-44 270.9 26.0 247 60-311 9-292 (316)
74 3sfz_A APAF-1, apoptotic pepti 100.0 3.3E-38 1.1E-42 304.2 41.0 295 13-311 648-1033(1249)
75 3iz6_a 40S ribosomal protein R 100.0 1.2E-39 4.3E-44 276.2 27.0 254 13-270 99-377 (380)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-39 5.9E-44 277.4 27.2 281 24-311 36-341 (402)
77 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.7E-38 9.4E-43 273.8 35.0 285 22-311 4-390 (450)
78 3dm0_A Maltose-binding peripla 100.0 8.1E-38 2.8E-42 284.7 37.4 250 15-267 423-692 (694)
79 2oaj_A Protein SNI1; WD40 repe 100.0 2.2E-38 7.5E-43 294.5 34.2 205 19-228 14-247 (902)
80 3jrp_A Fusion protein of prote 100.0 1E-37 3.5E-42 263.7 32.3 251 15-268 4-287 (379)
81 3mkq_A Coatomer beta'-subunit; 100.0 4.3E-37 1.5E-41 284.6 38.3 290 13-310 46-384 (814)
82 2oaj_A Protein SNI1; WD40 repe 100.0 3.9E-37 1.3E-41 286.2 37.0 287 20-311 56-518 (902)
83 3jrp_A Fusion protein of prote 100.0 5.4E-37 1.8E-41 259.2 33.7 252 55-311 2-286 (379)
84 4aez_A CDC20, WD repeat-contai 100.0 1.5E-36 5.2E-41 259.1 36.3 248 21-275 133-387 (401)
85 3zwl_B Eukaryotic translation 100.0 4.6E-36 1.6E-40 252.5 37.8 256 13-274 65-352 (369)
86 4gga_A P55CDC, cell division c 100.0 2.4E-36 8.1E-41 259.4 36.2 260 17-283 142-410 (420)
87 4aow_A Guanine nucleotide-bind 100.0 8.4E-36 2.9E-40 248.5 38.4 252 13-270 77-339 (340)
88 1sq9_A Antiviral protein SKI8; 100.0 3.9E-37 1.3E-41 262.1 30.6 253 12-269 52-396 (397)
89 3dwl_C Actin-related protein 2 100.0 6.9E-38 2.4E-42 265.1 22.1 244 60-310 7-279 (377)
90 3gre_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 270.5 21.0 272 29-311 34-358 (437)
91 1k8k_C P40, ARP2/3 complex 41 100.0 8.7E-36 3E-40 251.4 33.2 245 61-311 5-273 (372)
92 2j04_A TAU60, YPL007P, hypothe 100.0 5.7E-37 1.9E-41 263.5 25.0 262 21-311 14-296 (588)
93 3k26_A Polycomb protein EED; W 100.0 1.5E-36 5.2E-41 255.3 26.9 240 21-267 68-365 (366)
94 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-36 4.9E-41 253.9 26.4 267 30-308 44-329 (343)
95 3ei3_B DNA damage-binding prot 100.0 1.5E-35 5.1E-40 251.4 31.9 242 19-268 115-382 (383)
96 1r5m_A SIR4-interacting protei 100.0 3E-35 1E-39 252.2 34.1 261 44-311 25-360 (425)
97 3i2n_A WD repeat-containing pr 100.0 5.6E-36 1.9E-40 251.1 28.5 248 19-270 62-355 (357)
98 2xyi_A Probable histone-bindin 100.0 4.2E-35 1.4E-39 252.4 33.8 248 58-311 122-409 (430)
99 4gq1_A NUP37; propeller, trans 100.0 9.2E-37 3.1E-41 259.6 23.1 240 73-312 98-392 (393)
100 3jro_A Fusion protein of prote 100.0 4.7E-36 1.6E-40 275.0 27.8 253 16-311 3-284 (753)
101 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-36 8.9E-41 264.2 25.0 205 16-222 201-427 (524)
102 2xyi_A Probable histone-bindin 100.0 2.2E-35 7.4E-40 254.2 29.9 250 16-269 122-411 (430)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 7.9E-36 2.7E-40 254.7 26.3 250 14-269 73-343 (402)
104 3bws_A Protein LP49; two-domai 100.0 7.4E-34 2.5E-38 244.7 37.3 286 15-311 116-431 (433)
105 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-33 3.7E-38 232.9 36.2 249 13-275 50-303 (313)
106 3dw8_B Serine/threonine-protei 100.0 4.7E-35 1.6E-39 253.0 28.9 246 62-311 26-372 (447)
107 3vu4_A KMHSV2; beta-propeller 100.0 8.2E-34 2.8E-38 238.2 35.4 278 14-310 11-334 (355)
108 4a11_B DNA excision repair pro 100.0 3E-34 1E-38 244.7 33.3 284 19-311 96-404 (408)
109 4e54_B DNA damage-binding prot 100.0 1.8E-35 6.1E-40 255.1 24.8 252 15-271 157-433 (435)
110 4ggc_A P55CDC, cell division c 100.0 2.5E-33 8.4E-38 231.4 36.6 245 18-269 63-316 (318)
111 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-34 8.5E-39 248.0 31.6 259 13-288 164-433 (435)
112 4h5i_A Guanine nucleotide-exch 100.0 3.5E-34 1.2E-38 241.3 29.9 203 20-224 131-344 (365)
113 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-35 6.4E-40 254.1 22.1 247 20-299 83-350 (588)
114 1yfq_A Cell cycle arrest prote 100.0 4.6E-34 1.6E-38 238.2 29.2 241 60-311 7-281 (342)
115 3mmy_A MRNA export factor; mRN 100.0 1.4E-33 4.9E-38 237.2 31.6 256 49-311 24-303 (368)
116 2w18_A PALB2, fancn, partner a 100.0 2E-33 6.7E-38 227.7 29.9 289 12-311 25-356 (356)
117 1l0q_A Surface layer protein; 100.0 6.4E-32 2.2E-36 229.5 39.3 265 35-311 3-274 (391)
118 1l0q_A Surface layer protein; 100.0 6.5E-31 2.2E-35 223.3 41.8 256 14-280 24-287 (391)
119 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-31 3.6E-36 232.5 34.0 244 19-267 99-390 (450)
120 3vu4_A KMHSV2; beta-propeller 100.0 5.6E-32 1.9E-36 227.0 28.5 245 48-311 3-270 (355)
121 3lrv_A PRE-mRNA-splicing facto 100.0 1.8E-32 6.2E-37 229.1 22.1 229 72-311 44-291 (343)
122 3f3f_A Nucleoporin SEH1; struc 100.0 5.8E-31 2E-35 219.3 28.4 216 13-230 48-344 (351)
123 4gq1_A NUP37; propeller, trans 100.0 6.4E-32 2.2E-36 229.8 22.6 240 23-267 90-388 (393)
124 3bws_A Protein LP49; two-domai 100.0 2.1E-29 7E-34 216.9 34.8 282 21-311 59-389 (433)
125 2w18_A PALB2, fancn, partner a 100.0 1.1E-30 3.6E-35 211.8 24.0 198 21-221 110-355 (356)
126 3jro_A Fusion protein of prote 100.0 4.1E-31 1.4E-35 242.2 23.4 213 13-225 44-287 (753)
127 1nir_A Nitrite reductase; hemo 100.0 7.1E-29 2.4E-33 218.7 33.3 275 29-311 144-457 (543)
128 2ecf_A Dipeptidyl peptidase IV 100.0 5.9E-29 2E-33 228.1 30.2 286 22-311 36-412 (741)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.5E-28 5.1E-33 210.3 28.3 265 16-292 111-410 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-28 4E-33 211.0 27.5 278 23-311 63-386 (415)
131 1nir_A Nitrite reductase; hemo 100.0 2.9E-27 9.9E-32 208.4 36.5 278 25-310 181-512 (543)
132 3vgz_A Uncharacterized protein 100.0 9.3E-26 3.2E-30 188.7 37.4 272 21-300 39-334 (353)
133 1ri6_A Putative isomerase YBHE 100.0 1.7E-26 5.9E-31 192.2 29.5 271 36-311 7-307 (343)
134 3u4y_A Uncharacterized protein 100.0 5.9E-26 2E-30 188.4 32.3 276 28-311 3-303 (331)
135 1xfd_A DIP, dipeptidyl aminope 100.0 1.8E-27 6.2E-32 217.6 23.4 286 24-311 18-392 (723)
136 2ojh_A Uncharacterized protein 100.0 1E-26 3.5E-31 189.3 25.3 253 39-301 17-293 (297)
137 2z3z_A Dipeptidyl aminopeptida 100.0 2.8E-25 9.7E-30 202.6 31.3 280 23-311 82-434 (706)
138 2ecf_A Dipeptidyl peptidase IV 99.9 4.2E-25 1.4E-29 202.5 28.7 278 24-309 110-456 (741)
139 2z3z_A Dipeptidyl aminopeptida 99.9 3.4E-25 1.2E-29 202.1 27.3 277 25-310 28-387 (706)
140 1pby_B Quinohemoprotein amine 99.9 1.9E-24 6.5E-29 179.4 28.9 262 35-311 2-309 (337)
141 3o4h_A Acylamino-acid-releasin 99.9 8.3E-25 2.8E-29 195.3 26.4 273 21-310 20-311 (582)
142 1k32_A Tricorn protease; prote 99.9 2E-24 6.9E-29 204.8 29.8 286 15-311 92-460 (1045)
143 1k32_A Tricorn protease; prote 99.9 1.3E-24 4.4E-29 206.1 28.3 279 15-309 196-499 (1045)
144 3hfq_A Uncharacterized protein 99.9 3E-23 1E-27 173.3 33.3 268 42-311 14-316 (347)
145 1ri6_A Putative isomerase YBHE 99.9 3.6E-23 1.2E-27 172.1 32.7 268 19-293 34-336 (343)
146 3u4y_A Uncharacterized protein 99.9 5.1E-23 1.7E-27 170.7 32.2 270 16-291 34-326 (331)
147 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-24 3.8E-29 199.2 23.5 277 17-298 52-428 (723)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-24 5.5E-29 186.1 22.9 202 21-224 35-279 (434)
149 2ojh_A Uncharacterized protein 99.9 4.7E-24 1.6E-28 173.5 23.7 235 16-259 35-293 (297)
150 3pe7_A Oligogalacturonate lyas 99.9 1.2E-22 4.2E-27 172.1 27.4 292 14-311 22-381 (388)
151 1pby_B Quinohemoprotein amine 99.9 1.7E-22 5.7E-27 167.7 27.3 244 24-278 35-320 (337)
152 3scy_A Hypothetical bacterial 99.9 2.4E-21 8.3E-26 162.7 34.6 274 34-311 13-336 (361)
153 1jmx_B Amine dehydrogenase; ox 99.9 3.7E-22 1.3E-26 166.5 27.1 239 27-276 4-333 (349)
154 3hfq_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 160.5 31.4 248 20-271 37-322 (347)
155 1z68_A Fibroblast activation p 99.9 2.8E-23 9.7E-28 189.8 18.7 280 24-310 61-441 (719)
156 1z68_A Fibroblast activation p 99.9 1.3E-22 4.5E-27 185.4 22.5 278 27-311 20-390 (719)
157 3vgz_A Uncharacterized protein 99.9 1.2E-20 4E-25 157.7 32.0 229 23-259 89-335 (353)
158 3scy_A Hypothetical bacterial 99.9 4.9E-20 1.7E-24 154.7 35.4 262 21-288 48-360 (361)
159 2oit_A Nucleoporin 214KDA; NH2 99.9 3.2E-21 1.1E-25 165.5 28.2 160 20-181 90-279 (434)
160 3c5m_A Oligogalacturonate lyas 99.9 8.5E-22 2.9E-26 167.2 21.6 277 25-311 38-381 (396)
161 3azo_A Aminopeptidase; POP fam 99.9 3.9E-21 1.3E-25 174.1 26.7 291 15-311 16-366 (662)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.8E-20 9.7E-25 156.4 29.6 272 37-311 5-340 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.7E-20 2E-24 154.6 28.0 245 22-269 39-342 (365)
164 1jmx_B Amine dehydrogenase; ox 99.9 2.6E-20 9E-25 155.2 24.8 234 69-311 4-324 (349)
165 4a5s_A Dipeptidyl peptidase 4 99.9 2.3E-20 7.7E-25 171.1 25.7 279 24-310 18-396 (740)
166 3o4h_A Acylamino-acid-releasin 99.9 9.9E-21 3.4E-25 168.9 20.4 231 64-310 21-274 (582)
167 3fvz_A Peptidyl-glycine alpha- 99.9 6.2E-19 2.1E-23 146.1 29.4 244 21-268 22-322 (329)
168 1q7f_A NHL, brain tumor CG1071 99.9 6.7E-18 2.3E-22 137.0 34.1 242 20-269 27-281 (286)
169 2dg1_A DRP35, lactonase; beta 99.8 3.5E-18 1.2E-22 141.7 28.7 271 23-301 6-301 (333)
170 2gop_A Trilobed protease; beta 99.8 3.8E-18 1.3E-22 142.3 27.9 258 23-310 15-329 (347)
171 3fvz_A Peptidyl-glycine alpha- 99.8 2E-17 6.9E-22 137.0 32.1 243 64-311 23-321 (329)
172 2oiz_A Aromatic amine dehydrog 99.8 5.8E-18 2E-22 141.9 28.9 264 17-292 46-360 (361)
173 4a5s_A Dipeptidyl peptidase 4 99.8 2.2E-18 7.6E-23 157.9 28.3 266 26-298 65-434 (740)
174 3azo_A Aminopeptidase; POP fam 99.8 1.1E-18 3.8E-23 158.0 23.8 249 16-271 61-372 (662)
175 2oiz_A Aromatic amine dehydrog 99.8 5E-18 1.7E-22 142.3 25.6 266 33-310 14-332 (361)
176 1q7f_A NHL, brain tumor CG1071 99.8 7.4E-17 2.5E-21 130.8 31.0 239 63-311 28-279 (286)
177 2z2n_A Virginiamycin B lyase; 99.8 3.7E-15 1.3E-19 121.2 40.4 271 19-298 11-284 (299)
178 3pe7_A Oligogalacturonate lyas 99.8 3.5E-18 1.2E-22 144.7 22.8 258 49-311 15-328 (388)
179 2xdw_A Prolyl endopeptidase; a 99.8 8.2E-17 2.8E-21 146.9 32.1 274 32-310 81-412 (710)
180 2xdw_A Prolyl endopeptidase; a 99.8 1.2E-16 4.1E-21 145.8 31.0 245 21-270 123-416 (710)
181 1qks_A Cytochrome CD1 nitrite 99.8 6.3E-16 2.2E-20 136.2 33.4 274 32-310 165-475 (567)
182 3e5z_A Putative gluconolactona 99.8 5.4E-16 1.9E-20 126.4 29.4 242 15-269 20-287 (296)
183 3e5z_A Putative gluconolactona 99.8 1.7E-15 6E-20 123.4 30.2 230 58-300 21-277 (296)
184 2bkl_A Prolyl endopeptidase; m 99.8 9.6E-17 3.3E-21 146.1 25.1 271 31-310 76-395 (695)
185 2gop_A Trilobed protease; beta 99.8 1E-15 3.5E-20 127.5 29.1 234 23-280 59-341 (347)
186 1rwi_B Serine/threonine-protei 99.8 7.8E-16 2.7E-20 123.6 26.8 242 24-272 25-268 (270)
187 3no2_A Uncharacterized protein 99.8 1.5E-15 5E-20 122.3 28.1 216 33-256 4-231 (276)
188 2dg1_A DRP35, lactonase; beta 99.8 1.2E-14 4.3E-19 120.3 34.5 238 15-258 37-300 (333)
189 3c5m_A Oligogalacturonate lyas 99.8 1.9E-17 6.5E-22 140.3 17.2 255 49-311 15-328 (396)
190 2qc5_A Streptogramin B lactona 99.8 6.6E-14 2.3E-18 113.8 37.6 279 20-310 17-298 (300)
191 2bkl_A Prolyl endopeptidase; m 99.8 1.4E-16 4.7E-21 145.0 22.5 244 20-270 118-399 (695)
192 3no2_A Uncharacterized protein 99.7 2.8E-15 9.5E-20 120.7 26.0 214 75-298 4-231 (276)
193 1qks_A Cytochrome CD1 nitrite 99.7 8.4E-14 2.9E-18 122.7 37.4 281 23-310 197-536 (567)
194 3dsm_A Uncharacterized protein 99.7 6.1E-15 2.1E-19 122.0 27.8 253 23-287 44-319 (328)
195 2mad_H Methylamine dehydrogena 99.7 1.4E-13 4.7E-18 115.6 34.7 271 29-310 27-348 (373)
196 3dsm_A Uncharacterized protein 99.7 2.4E-14 8.2E-19 118.4 29.3 259 42-311 15-301 (328)
197 1rwi_B Serine/threonine-protei 99.7 9.6E-15 3.3E-19 117.2 25.7 238 66-311 25-263 (270)
198 2z2n_A Virginiamycin B lyase; 99.7 6.4E-13 2.2E-17 107.9 34.9 239 21-269 55-296 (299)
199 1yr2_A Prolyl oligopeptidase; 99.7 1.4E-14 4.7E-19 132.8 27.6 244 21-270 161-443 (741)
200 1yr2_A Prolyl oligopeptidase; 99.7 1.7E-14 5.8E-19 132.2 27.6 271 31-310 115-439 (741)
201 3sjl_D Methylamine dehydrogena 99.7 1.5E-13 5.3E-18 114.2 27.6 271 28-310 38-361 (386)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 8.6E-13 2.9E-17 108.1 29.4 242 18-268 13-299 (314)
203 1xip_A Nucleoporin NUP159; bet 99.6 2.2E-14 7.4E-19 119.7 18.8 173 24-210 39-231 (388)
204 3hrp_A Uncharacterized protein 99.6 2E-12 6.9E-17 109.9 31.1 237 23-266 131-408 (409)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.5E-12 1.2E-16 104.4 30.4 241 65-311 18-298 (314)
206 2qc5_A Streptogramin B lactona 99.6 1.2E-11 4.1E-16 100.4 33.3 238 64-310 19-258 (300)
207 3c75_H MADH, methylamine dehyd 99.6 6.6E-13 2.3E-17 112.3 24.5 267 32-310 82-400 (426)
208 3hrp_A Uncharacterized protein 99.6 1.3E-11 4.3E-16 105.0 31.1 236 66-310 132-408 (409)
209 3g4e_A Regucalcin; six bladed 99.6 3.4E-11 1.2E-15 98.0 32.2 226 66-299 14-261 (297)
210 3iuj_A Prolyl endopeptidase; h 99.6 1.1E-12 3.8E-17 119.2 25.1 242 20-270 126-407 (693)
211 2mad_H Methylamine dehydrogena 99.6 1.3E-10 4.3E-15 97.6 35.3 238 27-275 70-357 (373)
212 3dr2_A Exported gluconolactona 99.6 1.4E-11 4.9E-16 100.6 27.7 235 15-260 37-299 (305)
213 3g4e_A Regucalcin; six bladed 99.5 1.9E-10 6.4E-15 93.6 33.1 225 21-252 11-256 (297)
214 3sjl_D Methylamine dehydrogena 99.5 1.2E-11 4.2E-16 102.9 25.8 254 27-290 82-384 (386)
215 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.8E-17 108.8 18.4 174 66-254 39-230 (388)
216 2ghs_A AGR_C_1268P; regucalcin 99.5 1.6E-10 5.4E-15 95.3 30.2 224 67-300 51-292 (326)
217 3dr2_A Exported gluconolactona 99.5 7.3E-11 2.5E-15 96.4 27.3 228 59-300 39-297 (305)
218 2qe8_A Uncharacterized protein 99.5 1.5E-11 5.1E-16 102.2 21.5 255 23-298 17-309 (343)
219 3c75_H MADH, methylamine dehyd 99.5 1.1E-10 3.7E-15 98.8 26.4 240 27-275 122-409 (426)
220 2ghs_A AGR_C_1268P; regucalcin 99.5 1.5E-09 5.1E-14 89.5 32.9 220 24-253 50-287 (326)
221 1yiq_A Quinohemoprotein alcoho 99.5 1.5E-10 5.2E-15 104.8 29.1 258 34-296 121-534 (689)
222 3iuj_A Prolyl endopeptidase; h 99.4 6.1E-11 2.1E-15 107.8 25.2 237 63-310 127-403 (693)
223 1kb0_A Quinohemoprotein alcoho 99.4 6.3E-10 2.2E-14 100.5 28.1 259 33-297 127-537 (677)
224 1mda_H Methylamine dehydrogena 99.4 1.2E-10 4E-15 97.0 19.7 245 27-289 69-366 (368)
225 2hz6_A Endoplasmic reticulum t 99.4 3.1E-13 1.1E-17 113.4 4.3 188 33-231 8-200 (369)
226 1mda_H Methylamine dehydrogena 99.3 1.1E-10 3.7E-15 97.2 18.7 248 45-310 47-344 (368)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.3 3.8E-09 1.3E-13 88.8 27.1 259 33-309 102-375 (376)
228 1yiq_A Quinohemoprotein alcoho 99.3 2.1E-09 7.2E-14 97.4 25.7 194 34-229 70-344 (689)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.3 7.5E-09 2.6E-13 87.0 27.4 261 33-310 52-335 (376)
230 2hz6_A Endoplasmic reticulum t 99.3 1.4E-12 4.8E-17 109.5 4.4 203 75-292 8-216 (369)
231 1npe_A Nidogen, entactin; glyc 99.3 9.2E-08 3.1E-12 76.3 32.0 250 35-292 2-263 (267)
232 1kb0_A Quinohemoprotein alcoho 99.3 3.2E-09 1.1E-13 96.0 24.4 268 34-310 77-505 (677)
233 2ece_A 462AA long hypothetical 99.2 9.9E-08 3.4E-12 80.2 29.8 223 74-298 93-399 (462)
234 2qe8_A Uncharacterized protein 99.2 3.3E-09 1.1E-13 88.0 20.7 199 20-219 64-317 (343)
235 2iwa_A Glutamine cyclotransfer 99.2 1.2E-07 4.2E-12 74.8 28.2 206 11-223 8-237 (266)
236 2ece_A 462AA long hypothetical 99.2 6.5E-08 2.2E-12 81.3 27.0 190 32-223 93-352 (462)
237 3hxj_A Pyrrolo-quinoline quino 99.2 2.9E-09 1E-13 87.6 18.7 263 22-309 59-321 (330)
238 2fp8_A Strictosidine synthase; 99.2 1.3E-07 4.3E-12 77.7 27.9 236 23-268 19-313 (322)
239 3nol_A Glutamine cyclotransfer 99.1 3.7E-08 1.3E-12 76.9 22.5 194 11-212 30-244 (262)
240 1kv9_A Type II quinohemoprotei 99.1 3.1E-07 1E-11 83.0 29.0 240 34-277 117-497 (668)
241 2iwa_A Glutamine cyclotransfer 99.1 6.2E-07 2.1E-11 70.8 26.7 197 67-269 23-238 (266)
242 3hxj_A Pyrrolo-quinoline quino 99.1 7.3E-08 2.5E-12 79.1 22.3 218 34-268 107-324 (330)
243 3nok_A Glutaminyl cyclase; bet 99.0 1.3E-07 4.3E-12 73.9 21.2 188 13-211 44-253 (268)
244 1k3i_A Galactose oxidase precu 99.0 3.1E-08 1.1E-12 89.5 20.4 270 27-299 190-530 (656)
245 1kv9_A Type II quinohemoprotei 99.0 2.3E-07 8E-12 83.8 25.7 192 34-229 66-339 (668)
246 3mbr_X Glutamine cyclotransfer 99.0 1E-06 3.5E-11 68.2 25.4 194 11-212 8-223 (243)
247 3nol_A Glutamine cyclotransfer 99.0 2.6E-07 8.8E-12 72.2 22.0 182 109-298 44-243 (262)
248 2p4o_A Hypothetical protein; p 99.0 2.8E-06 9.6E-11 69.1 28.8 209 10-227 20-245 (306)
249 1fwx_A Nitrous oxide reductase 99.0 1.4E-07 4.8E-12 82.1 21.3 216 75-298 100-406 (595)
250 4a2l_A BT_4663, two-component 99.0 2.3E-05 8E-10 72.4 37.3 276 22-310 214-524 (795)
251 3nok_A Glutaminyl cyclase; bet 99.0 2.2E-07 7.6E-12 72.5 19.5 181 109-298 56-253 (268)
252 3mbr_X Glutamine cyclotransfer 99.0 1.1E-06 3.9E-11 67.9 23.3 184 108-298 21-222 (243)
253 4a2l_A BT_4663, two-component 99.0 2.3E-05 7.9E-10 72.4 36.5 265 25-297 175-469 (795)
254 1npe_A Nidogen, entactin; glyc 98.9 4.7E-06 1.6E-10 66.3 28.0 203 23-231 36-246 (267)
255 2ad6_A Methanol dehydrogenase 98.9 1.4E-06 4.9E-11 77.1 27.2 257 34-297 115-524 (571)
256 1fwx_A Nitrous oxide reductase 98.9 4.1E-07 1.4E-11 79.2 21.6 233 32-269 99-432 (595)
257 1w6s_A Methanol dehydrogenase 98.9 2.9E-06 9.9E-11 75.3 26.8 252 37-295 124-531 (599)
258 2p4o_A Hypothetical protein; p 98.9 1.9E-05 6.5E-10 64.1 32.5 225 65-299 32-277 (306)
259 1flg_A Protein (quinoprotein e 98.9 8.2E-06 2.8E-10 72.4 28.7 258 34-297 117-546 (582)
260 3v64_C Agrin; beta propeller, 98.8 2.9E-05 1E-09 64.3 31.0 244 21-273 32-280 (349)
261 2fp8_A Strictosidine synthase; 98.8 3E-05 1E-09 63.4 29.4 234 66-310 20-311 (322)
262 3qqz_A Putative uncharacterize 98.8 2.2E-05 7.7E-10 61.5 28.4 203 16-221 20-251 (255)
263 1k3i_A Galactose oxidase precu 98.8 2E-06 6.8E-11 77.7 22.2 239 69-310 190-495 (656)
264 2xe4_A Oligopeptidase B; hydro 98.8 1E-06 3.6E-11 80.7 20.6 194 24-221 175-398 (751)
265 3v65_B Low-density lipoprotein 98.8 3.3E-05 1.1E-09 65.0 28.1 244 24-276 78-326 (386)
266 3tc9_A Hypothetical hydrolase; 98.8 2.8E-05 9.7E-10 66.3 27.9 154 24-179 138-300 (430)
267 2xe4_A Oligopeptidase B; hydro 98.7 1.1E-05 3.8E-10 74.0 26.6 194 66-266 175-398 (751)
268 2ad6_A Methanol dehydrogenase 98.7 9.8E-06 3.3E-10 71.8 24.9 194 34-231 62-343 (571)
269 3tc9_A Hypothetical hydrolase; 98.7 2.2E-05 7.4E-10 67.1 26.0 238 66-311 138-429 (430)
270 1ijq_A LDL receptor, low-densi 98.7 6.5E-05 2.2E-09 61.3 32.4 229 37-272 4-242 (316)
271 4hw6_A Hypothetical protein, I 98.7 5.9E-05 2E-09 64.4 28.2 200 24-226 140-376 (433)
272 3sov_A LRP-6, low-density lipo 98.7 7.5E-05 2.6E-09 61.0 28.8 224 43-272 12-242 (318)
273 1w6s_A Methanol dehydrogenase 98.6 6.4E-05 2.2E-09 66.7 27.4 196 34-231 62-350 (599)
274 4hw6_A Hypothetical protein, I 98.6 0.00022 7.5E-09 60.9 28.0 239 66-311 140-432 (433)
275 1flg_A Protein (quinoprotein e 98.5 0.00019 6.6E-09 63.6 27.3 196 34-231 68-363 (582)
276 3v9f_A Two-component system se 98.5 0.0006 2.1E-08 62.8 34.3 264 23-296 211-511 (781)
277 3p5b_L Low density lipoprotein 98.5 0.00033 1.1E-08 59.2 33.9 237 35-276 84-328 (400)
278 3v64_C Agrin; beta propeller, 98.5 0.00032 1.1E-08 58.1 28.4 204 24-230 74-282 (349)
279 3v9f_A Two-component system se 98.5 0.00075 2.6E-08 62.2 34.6 266 23-295 163-465 (781)
280 3qqz_A Putative uncharacterize 98.5 0.00022 7.5E-09 55.9 24.9 192 103-296 22-240 (255)
281 3amr_A 3-phytase; beta-propell 98.5 0.00035 1.2E-08 57.0 25.0 194 34-231 40-272 (355)
282 3v65_B Low-density lipoprotein 98.5 0.00044 1.5E-08 58.1 27.4 206 23-231 116-326 (386)
283 3m0c_C LDL receptor, low-densi 98.4 0.00096 3.3E-08 61.2 31.1 235 36-275 397-639 (791)
284 2p9w_A MAL S 1 allergenic prot 98.3 0.00059 2E-08 55.2 22.9 156 25-181 15-216 (334)
285 3kya_A Putative phosphatase; s 98.3 0.0016 5.4E-08 56.1 28.3 205 24-231 140-416 (496)
286 2xbg_A YCF48-like protein; pho 98.3 0.0012 4.1E-08 54.0 30.5 271 22-308 35-318 (327)
287 2vpj_A Kelch-like protein 12; 98.2 0.0012 3.9E-08 53.3 23.3 227 33-269 14-279 (301)
288 3p5b_L Low density lipoprotein 98.2 0.0022 7.4E-08 54.1 31.1 208 22-232 111-329 (400)
289 1ijq_A LDL receptor, low-densi 98.2 0.0018 6.1E-08 52.7 30.5 205 22-230 29-245 (316)
290 1n7d_A LDL receptor, low-densi 98.2 2.4E-05 8.2E-10 71.0 12.7 228 43-276 385-622 (699)
291 3sov_A LRP-6, low-density lipo 98.1 0.0022 7.4E-08 52.3 26.8 205 24-231 36-246 (318)
292 3m0c_C LDL receptor, low-densi 98.1 0.0055 1.9E-07 56.2 28.9 206 22-230 423-639 (791)
293 3kya_A Putative phosphatase; s 98.1 0.0045 1.5E-07 53.3 27.1 238 67-311 141-474 (496)
294 3s94_A LRP-6, low-density lipo 98.1 0.0059 2E-07 54.5 32.0 158 23-182 84-245 (619)
295 3s94_A LRP-6, low-density lipo 98.1 0.0059 2E-07 54.5 27.0 224 43-271 17-246 (619)
296 3amr_A 3-phytase; beta-propell 98.0 0.0033 1.1E-07 51.3 22.7 183 119-310 40-261 (355)
297 2vpj_A Kelch-like protein 12; 98.0 0.003 1E-07 50.8 21.7 184 118-310 62-276 (301)
298 2xn4_A Kelch-like protein 2; s 97.9 0.0058 2E-07 49.2 22.9 225 34-269 16-277 (302)
299 2p9w_A MAL S 1 allergenic prot 97.9 0.0064 2.2E-07 49.2 23.3 158 111-268 16-215 (334)
300 3ii7_A Kelch-like protein 7; p 97.9 0.0064 2.2E-07 49.0 24.3 225 34-269 12-273 (306)
301 1zgk_A Kelch-like ECH-associat 97.9 0.0066 2.3E-07 49.0 21.1 226 33-269 24-288 (308)
302 2xbg_A YCF48-like protein; pho 97.8 0.0099 3.4E-07 48.5 27.5 230 22-266 79-320 (327)
303 1n7d_A LDL receptor, low-densi 97.8 0.00018 6.2E-09 65.3 11.5 205 24-231 407-622 (699)
304 3ii7_A Kelch-like protein 7; p 97.8 0.011 3.6E-07 47.7 24.2 223 77-310 13-270 (306)
305 2ism_A Putative oxidoreductase 97.8 0.012 4.3E-07 48.5 24.6 224 65-298 31-333 (352)
306 2xn4_A Kelch-like protein 2; s 97.7 0.013 4.6E-07 47.0 22.4 184 118-310 61-274 (302)
307 4asc_A Kelch repeat and BTB do 97.7 0.015 5.1E-07 47.1 23.6 212 78-300 7-253 (315)
308 2xzh_A Clathrin heavy chain 1; 97.7 0.015 5.1E-07 46.9 30.9 235 29-272 73-336 (365)
309 4a0p_A LRP6, LRP-6, low-densit 97.6 0.032 1.1E-06 49.9 29.3 227 36-271 8-240 (628)
310 1zgk_A Kelch-like ECH-associat 97.5 0.022 7.6E-07 45.9 21.1 184 118-310 70-285 (308)
311 2woz_A Kelch repeat and BTB do 97.5 0.027 9.1E-07 45.6 21.9 207 87-301 25-264 (318)
312 1bpo_A Protein (clathrin); cla 97.5 0.038 1.3E-06 46.4 31.6 235 29-272 72-335 (494)
313 3ei3_A DNA damage-binding prot 97.4 0.1 3.5E-06 50.2 34.3 73 22-94 553-635 (1158)
314 4asc_A Kelch repeat and BTB do 97.4 0.037 1.3E-06 44.7 23.6 224 36-269 7-278 (315)
315 1tl2_A L10, protein (tachylect 97.3 0.03 1E-06 42.4 17.4 175 32-216 2-203 (236)
316 2uvk_A YJHT; unknown function, 97.3 0.032 1.1E-06 46.0 17.7 179 118-303 65-329 (357)
317 2ism_A Putative oxidoreductase 97.2 0.078 2.7E-06 43.7 25.9 101 23-126 31-153 (352)
318 3a9g_A Putative uncharacterize 97.1 0.08 2.7E-06 43.7 26.1 229 65-298 29-330 (354)
319 3das_A Putative oxidoreductase 97.0 0.1 3.4E-06 42.8 19.8 117 10-126 19-158 (347)
320 2uvk_A YJHT; unknown function, 97.0 0.11 3.8E-06 42.6 19.5 236 33-274 19-348 (357)
321 2be1_A Serine/threonine-protei 97.0 0.11 3.9E-06 42.3 17.7 190 34-227 10-235 (339)
322 3sre_A PON1, serum paraoxonase 97.0 0.12 4E-06 42.6 22.1 154 66-223 51-252 (355)
323 2woz_A Kelch repeat and BTB do 96.9 0.12 4E-06 41.8 23.0 224 36-269 18-288 (318)
324 1xi4_A Clathrin heavy chain; a 96.9 0.17 5.7E-06 49.2 20.2 234 30-272 73-335 (1630)
325 3pbp_A Nucleoporin NUP82; beta 96.9 0.15 5.1E-06 42.8 18.8 110 109-219 67-208 (452)
326 2zwa_A Leucine carboxyl methyl 96.9 0.25 8.6E-06 44.8 21.6 195 74-270 396-637 (695)
327 3pbp_A Nucleoporin NUP82; beta 96.8 0.17 5.9E-06 42.4 19.6 144 31-176 29-208 (452)
328 1xi4_A Clathrin heavy chain; a 96.8 0.36 1.2E-05 47.0 21.5 234 44-288 48-309 (1630)
329 4a0p_A LRP6, LRP-6, low-densit 96.7 0.29 1E-05 43.8 31.5 205 23-230 340-556 (628)
330 3sre_A PON1, serum paraoxonase 96.6 0.23 7.8E-06 40.9 32.5 204 14-221 41-296 (355)
331 1tl2_A L10, protein (tachylect 96.6 0.034 1.2E-06 42.1 10.7 105 108-218 41-158 (236)
332 2zwa_A Leucine carboxyl methyl 96.6 0.3 1E-05 44.3 18.9 154 117-270 396-579 (695)
333 1cru_A Protein (soluble quinop 96.5 0.32 1.1E-05 41.6 18.2 105 23-127 27-163 (454)
334 2g8s_A Glucose/sorbosone dehyd 96.4 0.31 1.1E-05 40.1 24.4 104 65-168 18-148 (353)
335 3a9g_A Putative uncharacterize 96.4 0.31 1.1E-05 40.1 27.7 143 22-167 28-215 (354)
336 2g8s_A Glucose/sorbosone dehyd 96.3 0.37 1.3E-05 39.6 23.3 142 23-166 18-214 (353)
337 2xzh_A Clathrin heavy chain 1; 96.0 0.46 1.6E-05 38.4 32.6 234 44-290 49-312 (365)
338 1bpo_A Protein (clathrin); cla 95.8 0.73 2.5E-05 38.9 30.7 242 44-298 48-319 (494)
339 3s25_A Hypothetical 7-bladed b 95.5 0.76 2.6E-05 36.8 22.0 175 29-224 59-256 (302)
340 3ei3_A DNA damage-binding prot 95.2 2.4 8.1E-05 40.9 31.8 243 46-299 494-756 (1158)
341 3s25_A Hypothetical 7-bladed b 95.0 1.1 3.8E-05 35.9 17.8 172 74-269 23-217 (302)
342 3ott_A Two-component system se 93.6 4.2 0.00015 37.1 27.9 220 64-295 21-247 (758)
343 2be1_A Serine/threonine-protei 93.4 0.35 1.2E-05 39.5 8.2 113 120-232 11-139 (339)
344 1cru_A Protein (soluble quinop 93.4 3.3 0.00011 35.3 20.1 104 65-168 27-162 (454)
345 3sbq_A Nitrous-oxide reductase 93.2 1.1 3.6E-05 39.2 11.0 102 66-168 324-453 (638)
346 3ott_A Two-component system se 92.1 6.9 0.00024 35.7 33.5 276 1-293 1-292 (758)
347 3qhy_B Beta-lactamase inhibito 92.1 3.6 0.00012 32.5 19.6 245 24-295 25-269 (282)
348 3sbq_A Nitrous-oxide reductase 91.7 2 6.9E-05 37.5 10.8 70 152-223 325-408 (638)
349 3das_A Putative oxidoreductase 90.4 6.5 0.00022 32.1 29.6 231 64-298 31-326 (347)
350 3qhy_B Beta-lactamase inhibito 89.0 7.1 0.00024 30.7 18.1 217 66-308 25-242 (282)
351 3uc1_A DNA gyrase subunit A; D 86.1 12 0.00042 30.2 18.0 154 23-178 95-277 (327)
352 2wg3_C Hedgehog-interacting pr 86.1 15 0.00052 31.3 12.9 106 24-129 15-160 (463)
353 1suu_A DNA gyrase subunit A; t 85.3 13 0.00044 29.8 26.9 189 31-222 5-230 (312)
354 4gq2_M Nucleoporin NUP120; bet 81.5 17 0.00058 34.3 11.8 31 244-274 242-272 (950)
355 1wp5_A Topoisomerase IV; broke 78.9 24 0.00081 28.4 24.5 233 32-268 3-277 (323)
356 2wg3_C Hedgehog-interacting pr 76.2 36 0.0012 29.0 15.9 106 65-170 14-159 (463)
357 4gq2_M Nucleoporin NUP120; bet 72.9 9 0.00031 36.2 7.3 38 23-60 236-273 (950)
358 1zi0_A DNA gyrase subunit A; b 69.7 40 0.0014 26.8 26.8 232 32-268 1-277 (307)
359 3no0_A DNA gyrase subunit A; D 68.5 40 0.0014 26.3 18.5 154 22-178 67-244 (276)
360 3zwu_A Alkaline phosphatase PH 67.5 32 0.0011 30.4 9.1 59 152-210 478-548 (592)
361 4fhn_B Nucleoporin NUP120; pro 67.2 12 0.00043 36.0 7.1 36 110-145 240-275 (1139)
362 3zwu_A Alkaline phosphatase PH 64.2 40 0.0014 29.8 9.1 58 25-82 478-548 (592)
363 4hvt_A Ritya.17583.B, post-pro 63.0 90 0.0031 28.4 22.8 198 24-225 130-383 (711)
364 3f7f_A Nucleoporin NUP120; nuc 60.6 20 0.00068 32.5 6.5 37 23-61 222-258 (729)
365 4fhn_B Nucleoporin NUP120; pro 57.8 9.7 0.00033 36.8 4.5 37 24-60 239-275 (1139)
366 4a9v_A PHOX; hydrolase, beta-p 56.8 76 0.0026 28.0 9.3 60 23-82 476-548 (592)
367 3l6v_A GYRA, DNA gyrase subuni 55.7 85 0.0029 25.8 26.7 145 31-178 4-178 (370)
368 3b7f_A Glycosyl hydrolase, BNR 54.3 89 0.003 25.5 25.3 97 78-177 24-144 (394)
369 4a9v_A PHOX; hydrolase, beta-p 53.1 1.1E+02 0.0038 27.0 9.7 60 152-211 478-549 (592)
370 3f7f_A Nucleoporin NUP120; nuc 48.9 33 0.0011 31.0 6.0 36 109-146 223-258 (729)
371 3uc1_A DNA gyrase subunit A; D 38.6 1.5E+02 0.0052 23.7 27.9 264 34-301 3-321 (327)
372 4hvt_A Ritya.17583.B, post-pro 32.1 2.9E+02 0.0099 25.1 22.6 220 69-295 133-411 (711)
373 3b7f_A Glycosyl hydrolase, BNR 30.6 2.2E+02 0.0074 23.1 23.9 181 35-220 23-259 (394)
374 1suu_A DNA gyrase subunit A; t 24.0 2.7E+02 0.0092 22.0 23.4 152 25-179 49-230 (312)
375 3al9_A Plexin-A2; beta-propell 21.5 4E+02 0.014 23.1 8.3 67 24-90 401-476 (539)
376 1q47_A Semaphorin 3A; beta pro 21.3 3.4E+02 0.012 23.3 7.6 55 121-175 423-487 (495)
377 4gz8_A Semaphorin-3A; multi-do 20.8 4.1E+02 0.014 23.9 8.2 55 121-175 431-495 (667)
No 1
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-54 Score=358.71 Aligned_cols=300 Identities=65% Similarity=1.094 Sum_probs=277.5
Q ss_pred eeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEE
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIW 91 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w 91 (312)
+....++.+|.++|++++|+|++++|++++.||.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 45567789999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred eCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCC
Q 021459 92 DARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDG 171 (312)
Q Consensus 92 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
|+++. +.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++....+..|..++.+++|+|+++++++++.|+
T Consensus 93 d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 93 DVSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp ETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99875 56778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcE
Q 021459 172 TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKY 251 (312)
Q Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
.|++||+++++.+..+.......+..++|+|++++|++++.|+.|++||+++++.+..+.+|.....++...+..+++.+
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 99999999988887776666677888999999999999999999999999999998888888766555555666678899
Q ss_pred EEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeecC
Q 021459 252 IVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQDR 312 (312)
Q Consensus 252 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~~ 312 (312)
|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|+++.+++++.++|++|++|+.|+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d~ 312 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 312 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECCC
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCCC
Confidence 9999999999999999999999999999999999999999999999988889999999874
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-51 Score=343.55 Aligned_cols=294 Identities=27% Similarity=0.460 Sum_probs=261.3
Q ss_pred ceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEE
Q 021459 11 PYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRI 90 (312)
Q Consensus 11 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 90 (312)
+.+..+++.+|.+.|++++|+|++++|++|+.||.|++||..+++.+..+..|...|.+++|+|++++|++++.|+.+++
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCc---eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe
Q 021459 91 WDARTPF---DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 91 wd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
|++.+.. .....+.+|.+.+.++.|++++ .+++++.|+.|++||+++++....+..|...|.+++|+|+++++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 9987642 3455678899999999999876 58899999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc
Q 021459 168 SHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT 247 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
+.|+.|++||++++.....+.. +...+..++|+|++++|++++.|+.|++||++.++.+..+... .....+......+
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~s~ 280 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIICGITSVSFSK 280 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEEEEECT
T ss_pred eCCCcEEEEECCCCeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-CcccceEEEEECC
Confidence 9999999999999887776644 4566888999999999999999999999999988877665432 2222244445568
Q ss_pred CCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 248 NGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
++++|++|+.||.|++||+.+...+..+.+|...|.+++|+|++.+|+++|.| ++|+||+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D--~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD--SFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC--ccEEecC
Confidence 89999999999999999999988889999999999999999999999999965 5899996
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-52 Score=356.15 Aligned_cols=289 Identities=31% Similarity=0.580 Sum_probs=264.8
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
...+.+|.++|++++|+|++++|++|+.||.|++||..+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999989999999999999999999999999999999999998
Q ss_pred CCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 95 TPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
+. +++..+.+|...|.+++|+|+++.+++++.|++|++||+++++++..+..|...+.++.++|++.++++|+.|+.|+
T Consensus 181 ~~-~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 181 GF-ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SS-CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CC-ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 74 56778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeeEcccCCCCcEEEEEECCC--------------------CCEEEEEecCCeEEEEEcCCCcEEEEEEccC
Q 021459 175 IWDAGEGACLKTLIDDKDPAVSFAKFSPN--------------------GKFILVGTLDSTLKLWNYSAGKFLKIYTGHT 234 (312)
Q Consensus 175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 234 (312)
+||++++.....+.. +...+..+.|+|+ +.+|++|+.|+.|++||++++..+..+.+|.
T Consensus 260 vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 260 VWVVATKECKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEETTTCCEEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEECCCCceeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 999999887766643 4567888899986 6789999999999999999999999998888
Q ss_pred CceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 235 NKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
....++ ...+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|+++|.| ++|++|+.
T Consensus 339 ~~v~~v---~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D--~~i~vW~~ 409 (410)
T 1vyh_C 339 NWVRGV---LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD--QTVKVWEC 409 (410)
T ss_dssp SCEEEE---EECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETT--SEEEEEC-
T ss_pred CcEEEE---EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEeC
Confidence 765443 345789999999999999999999998899999999999999999999999999955 69999985
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-51 Score=337.29 Aligned_cols=292 Identities=21% Similarity=0.366 Sum_probs=257.2
Q ss_pred eeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEE
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIW 91 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w 91 (312)
+...+++.+|.+.|++++|+|++++|++++.||.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-eEEEEeeecCcCeEEEEEcc-CCCEEEEeeC
Q 021459 92 DARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-KCTRVIRAHSMPVTSVHFNR-DGSLIVSGSH 169 (312)
Q Consensus 92 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 169 (312)
|+.++ +.+..+.+|.+.|.+++|+|+++++++++.|++|++||++++ .....+..|...|.+++|+| ++.+|++|+.
T Consensus 83 d~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 83 NYNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp ETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred ECCCC-cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 99875 557788899999999999999999999999999999999887 45567788999999999999 6789999999
Q ss_pred CCeEEEEeCCCCceeeEcccCCCCcEEEEEECC--CCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc
Q 021459 170 DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSP--NGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT 247 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
|+.|++||++++.....+...+...+..+.+.| ++.+|++++.|+.|++||+++++.+..+.+|...... ....+
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~---~~~~p 238 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF---AVFHP 238 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE---EEECS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE---EEECC
Confidence 999999999887766665555556677777876 7789999999999999999999999999998876443 33457
Q ss_pred CCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCc--eEEEeeecCCeeEEEEee
Q 021459 248 NGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN--KIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~--~l~~~~~dgd~~v~iw~~ 310 (312)
++.+|++|+.||.|++||+.+.+....+..|...+.+++++|++. ++++++.| .+.+|.+
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~---g~~~~~~ 300 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN---GFTVLSL 300 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT---EEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC---ceEEEEe
Confidence 889999999999999999999999999999999999999999875 36665533 4666654
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=335.40 Aligned_cols=290 Identities=24% Similarity=0.410 Sum_probs=258.1
Q ss_pred ceeeecccccceEEEEECCC----CCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 14 HFKTLTAHSRAVSCVKFSND----GTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~----~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
.++.+.+|.+.|.+++|+|+ +.+|+||+.|+.|++|+..... ....+.+|...|.+++|++++.++++++.|+.
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34667899999999999985 5689999999999999987654 34567899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
|++||+.++ +.+..+..|...+.+++|+|++++|++++.+|.|++||+++++....+..|...+.+++|+|++++|++|
T Consensus 104 i~lWd~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 104 IRLWDLENG-KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp EEEEETTTT-EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCC-CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence 999999875 5567777888889999999999999999999999999999999888888898999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc
Q 021459 168 SHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT 247 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
+.|+.|++||+++++.+..+.. +...+..++|+|++++|++++.|+.|++||++.++....+.+|.....++ ...+
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~---~~sp 258 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV---AFCP 258 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEE---EECT
T ss_pred cCCCeEEEEECCCCcEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEE---EECC
Confidence 9999999999999988777644 45567788999999999999999999999999999988888887764443 3457
Q ss_pred CCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 248 NGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
++.+|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|+++.|++++.| ++|++|+.
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d--~~i~vwd~ 319 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD--QEIHIYDC 319 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--CCEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC--CeEEEEeC
Confidence 89999999999999999999999999999999999999999999999999955 58999985
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.7e-50 Score=336.45 Aligned_cols=293 Identities=22% Similarity=0.420 Sum_probs=259.1
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
+..+++.+|.+.|++++|+|++++|+||+.||.|++||..+++....+..|...|.+++|+|++.+|++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45678899999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred CCCC-----ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc--CCCEEE
Q 021459 93 ARTP-----FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR--DGSLIV 165 (312)
Q Consensus 93 ~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~ 165 (312)
+... ......+.+|...|.+++|+|+++.+++++.|++|++||+++++.+..+..|...|.+++++| ++++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 8542 123455678999999999999999999999999999999999999999999999999999987 568999
Q ss_pred EeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEE
Q 021459 166 SGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFS 245 (312)
Q Consensus 166 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
+|+.|+.|++||+++++....+.. +...+..++|+|++.+|++++.|+.|++||++.++.+..+..+... ..+.....
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~-~~~~~~~~ 292 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII-FGASSVDF 292 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-SCEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc-cceeEEEE
Confidence 999999999999999988776643 4567888999999999999999999999999988877666543321 12333344
Q ss_pred ccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 246 VTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 246 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
.+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.| ++|++|+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D--~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD--HTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT--SEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC--CCEEecC
Confidence 5789999999999999999999988888999999999999999999999999955 6999995
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-50 Score=341.69 Aligned_cols=297 Identities=22% Similarity=0.440 Sum_probs=254.5
Q ss_pred eeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEE
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIW 91 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w 91 (312)
....+++.+|.+.|++++|+|++++|++|+.|++|++||..+++....+..|...|.+++|+|++++|++|+.|+.+++|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCc------eeeeeeecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCCCeEEEEe-----eecCcCeEEEEEcc
Q 021459 92 DARTPF------DCLKTLRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKTGKCTRVI-----RAHSMPVTSVHFNR 159 (312)
Q Consensus 92 d~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~-----~~~~~~v~~~~~~~ 159 (312)
|+.... .....+.+|.+.+.++.|.|++ ..|++++.|++|++||+++++.+..+ ..|...+.++.|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 986421 2234577899999999999974 57999999999999999999888766 56888999999987
Q ss_pred -CCCEEEEeeCCCeEEEEeCCCC-ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce
Q 021459 160 -DGSLIVSGSHDGTCKIWDAGEG-ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK 237 (312)
Q Consensus 160 -~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 237 (312)
+++++++|+.|+.|++||++.. .....+. .+...+..++|+|++++|++++.|++|++||+++++.+..+..+....
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 8899999999999999999843 4444443 455668888999999999999999999999999999888776543211
Q ss_pred ----eEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecc----cCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 238 ----YCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKL----DGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 238 ----~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
..+......+++++|++|+.||.|++||+...+....+ .+|.+.|.+++|+|++++|+++|.| ++|++|+
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D--~~i~iW~ 372 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD--KNLKIWA 372 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT--SCEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC--CCEEEEe
Confidence 11223344578999999999999999999887776655 6899999999999999999999965 5999999
Q ss_pred ec
Q 021459 310 QD 311 (312)
Q Consensus 310 ~~ 311 (312)
+.
T Consensus 373 ~~ 374 (380)
T 3iz6_a 373 FS 374 (380)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-48 Score=323.87 Aligned_cols=295 Identities=26% Similarity=0.431 Sum_probs=242.1
Q ss_pred ceeceeeeccccc-ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEE---EeeeccCCEEEEEEccCCCeEEEEcCCC
Q 021459 11 PYRHFKTLTAHSR-AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVH---RFVGHSEGISDLAWSSDSHYICSASDDR 86 (312)
Q Consensus 11 ~~~~~~~~~~h~~-~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 86 (312)
++....++.+|.+ .|.+++|+|+|++||+|+.|+.|++|+..+..... ...+|...|.+++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 4567788999988 99999999999999999999999999988765432 2357999999999999999999999999
Q ss_pred eEEEEeCCCCc-eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCe---EEEEeeecCcCeEEEEEccCCC
Q 021459 87 TLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGK---CTRVIRAHSMPVTSVHFNRDGS 162 (312)
Q Consensus 87 ~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
.+++||+.... +.+..+.+|...|.+++|+|++++|++++.|++|++||++++. +...+..|...|.+++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999987643 4567788999999999999999999999999999999998763 4556778999999999999999
Q ss_pred EEEEeeCCCeEEEEeCCCCcee--eEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC---------------c
Q 021459 163 LIVSGSHDGTCKIWDAGEGACL--KTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG---------------K 225 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---------------~ 225 (312)
+|++++.|+.|++||.+++... ..+ ..+...+..++|+|++++|++++.|++|++||.... +
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 9999999999999998876532 333 345667889999999999999999999999996432 1
Q ss_pred EEEEEEc-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe---------eecccCCccceEEEEEcCCCc-eE
Q 021459 226 FLKIYTG-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM---------IQKLDGHTDSVISVTCHPTEN-KI 294 (312)
Q Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~h~~~v~~l~~~p~~~-~l 294 (312)
.+..+.+ |....+. ....+++..|++++.|+.|++|+...... .....+|...|++|+|+|++. .|
T Consensus 243 ~~~~~~~~h~~~v~~---v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 319 (345)
T 3fm0_A 243 CICTLSGFHSRTIYD---IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLL 319 (345)
T ss_dssp EEEEECSSCSSCEEE---EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEE
T ss_pred eeEEecCCCCCcEEE---EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEE
Confidence 2223333 3333333 33446788999999999999999864321 123468999999999999974 89
Q ss_pred EEeeecCCeeEEEEeec
Q 021459 295 ASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 295 ~~~~~dgd~~v~iw~~~ 311 (312)
+++|.| ++|++|+..
T Consensus 320 aS~s~D--g~v~~W~~~ 334 (345)
T 3fm0_A 320 ASCSDD--GEVAFWKYQ 334 (345)
T ss_dssp EEEETT--SCEEEEEEC
T ss_pred EEcCCC--CcEEEEEec
Confidence 999855 699999974
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-48 Score=327.47 Aligned_cols=287 Identities=21% Similarity=0.306 Sum_probs=235.2
Q ss_pred cccccceEEEEECCCCCEEEEEeC------CCeEEEEeCCCcce----EEEeeeccCCEEEEEEccCCCeEEEEcCCCeE
Q 021459 19 TAHSRAVSCVKFSNDGTLLASASL------DKTVIIWSASSLAL----VHRFVGHSEGISDLAWSSDSHYICSASDDRTL 88 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l~t~~~------d~~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 88 (312)
..|+..|++++|||||++|++|+. |+.|++|+..++.. .....+|...|.+++|+|++.++ +++.||.|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECCCEE
Confidence 469999999999999999999997 78899998876543 33456788999999999998655 56789999
Q ss_pred EEEeCCCCcee---eeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-EE
Q 021459 89 RIWDARTPFDC---LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS-LI 164 (312)
Q Consensus 89 ~~wd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 164 (312)
++||+.++... .....+|.+.|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|++++|+|++. ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 99998765322 123457999999999999999999999999999999999999999999999999999999875 78
Q ss_pred EEeeCCCeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCC-CCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEE
Q 021459 165 VSGSHDGTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPN-GKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITS 242 (312)
Q Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
++++.|+.|++||+++++....+. ......+..++|+|+ +.+|++|+.|+.|++||+++++.+..+.+|.....++
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l-- 275 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL-- 275 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE--
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE--
Confidence 999999999999999887665443 234456788899997 4688899999999999999999888888887765544
Q ss_pred EEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcC-CCceEEEeeecCCeeEEEEeec
Q 021459 243 TFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHP-TENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 243 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.+.+.++++|++|+.||.|++||+++++.+..+ +|.+.|++|+|+| ++.+|+++|.| ++|++|++.
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~D--g~v~iW~~~ 342 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWD--HKVLHHHLP 342 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETT--SCEEEEECC
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCC--CeEEEEECC
Confidence 344444578999999999999999988776554 7999999999999 78899999965 599999974
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-47 Score=314.12 Aligned_cols=290 Identities=26% Similarity=0.421 Sum_probs=247.1
Q ss_pred eeceeeecccccceEEEEECCCC-CEEEEEeCCCeEEEEeCCC-----cceEEEeeeccCCEEEEEEccCCCeEEEEcCC
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDG-TLLASASLDKTVIIWSASS-----LALVHRFVGHSEGISDLAWSSDSHYICSASDD 85 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~-~~l~t~~~d~~i~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 85 (312)
+....+|.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++|+.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 45567899999999999999965 8999999999999998764 33466788999999999999999999999999
Q ss_pred CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccC-----
Q 021459 86 RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRD----- 160 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~----- 160 (312)
+.|++||+.++ +.+..+.+|...|.+++|+|+++.+++++.|++|++||++. +++..+..|...+.++.+.|.
T Consensus 87 ~~v~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 87 KTLRLWDVATG-ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp SEEEEEETTTT-EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC-----
T ss_pred CEEEEEECCCC-CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCC
Confidence 99999999885 56778889999999999999999999999999999999974 566778889999999999985
Q ss_pred -CCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 161 -GSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 161 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
+..+++++.|+.|++||+++.+....+.. +...+..++|+|++++|++++.|+.|++||+.+++.+..+..+. .
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~--- 239 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-E--- 239 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-C---
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-c---
Confidence 44899999999999999998877766654 45678889999999999999999999999999998888777543 2
Q ss_pred EEEEEEccCCcEEEEeecCCeEEEEECCchheeeccc--------CCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 240 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLD--------GHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+......+++.+|++++.+ .+++|++.....+..+. .|...+.+++|+|++++|++++.| ++|++|++.
T Consensus 240 v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D--g~i~vWd~~ 316 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD--NVIRVWQVM 316 (319)
T ss_dssp EEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT--SCEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC--ceEEEEEEe
Confidence 3333445788898888765 49999998765554433 345679999999999999999955 589999973
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.4e-48 Score=323.75 Aligned_cols=285 Identities=22% Similarity=0.304 Sum_probs=231.8
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------cceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 19 TAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASS-----------LALVHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
..|...|.+++|+|||++|++++ |+++++|+... .........+...|.+++|+|++ .|++|+.||.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 45788899999999999999887 66777775211 11122234467789999999985 6779999999
Q ss_pred EEEEeCCCCcee---eeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-E
Q 021459 88 LRIWDARTPFDC---LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS-L 163 (312)
Q Consensus 88 v~~wd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 163 (312)
|++||+.++... .....+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+.+|...|.+++|+|++. +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999999875322 123458999999999999999999999999999999999999999999999999999999885 7
Q ss_pred EEEeeCCCeEEEEeCCCCceeeEccc-CCCCcEEEEEECCC-CCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEE
Q 021459 164 IVSGSHDGTCKIWDAGEGACLKTLID-DKDPAVSFAKFSPN-GKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCIT 241 (312)
Q Consensus 164 l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 241 (312)
+++++.|+.|++||+++++....+.. .+...+..++|+|+ +++|++|+.|+.|++||+++++.+..+.+|.....++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v- 263 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL- 263 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE-
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE-
Confidence 89999999999999999887776543 23445777889985 5688999999999999999999999999988875544
Q ss_pred EEEEccCC-cEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCce-EEEeeecCCeeEEEEeec
Q 021459 242 STFSVTNG-KYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENK-IASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 242 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~-l~~~~~dgd~~v~iw~~~ 311 (312)
.+. +++ .+|++|+.||.|++||+.+++.+ .+.+|.+.|.+|+|+|+++. |+++|.| ++|++|+++
T Consensus 264 -~fs-p~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D--~~v~~w~v~ 330 (344)
T 4gqb_B 264 -VFS-PHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWD--HQVVHHVVP 330 (344)
T ss_dssp -EEC-SSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETT--SCEEEEECC
T ss_pred -EEc-cCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCC--CeEEEEECC
Confidence 333 555 68999999999999999887654 57899999999999999875 5677855 699999874
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.3e-47 Score=321.36 Aligned_cols=284 Identities=32% Similarity=0.602 Sum_probs=241.5
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccC------------------CEEEEEEccCCCeEEE
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSE------------------GISDLAWSSDSHYICS 81 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 81 (312)
+|...|.+++|+|+|++||+|+ ++.+++|+..+++.+..+..|.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 68999999999888777665432 3899999999999999
Q ss_pred EcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc-C
Q 021459 82 ASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR-D 160 (312)
Q Consensus 82 ~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~ 160 (312)
|+.|+.|++||+.+. +.+..+.+|...|.+++|+|+++.|++++.|++|++||++++++...+. +...+.+++|+| +
T Consensus 141 ~~~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 999999999999875 5677788999999999999999999999999999999999998877665 556799999999 8
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEcc------cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCc---------
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTLI------DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGK--------- 225 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--------- 225 (312)
++++++|+.|+.|++||++++.....+. ..+...+..++|+|++++|++++.|+.|++||+++..
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 9999999999999999999887765542 2345678889999999999999999999999987632
Q ss_pred ---EEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcC------CCceEEE
Q 021459 226 ---FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHP------TENKIAS 296 (312)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p------~~~~l~~ 296 (312)
....+.+|.....+ ....+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| +++.|++
T Consensus 299 ~~~~~~~~~~h~~~v~~---~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLS---VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp --CEEEEEECCSSCEEE---EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred CCcceEEEecccCcEEE---EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence 33455666655333 33457789999999999999999999999999999999999999876 6789999
Q ss_pred eeecCCeeEEEEeec
Q 021459 297 AGLDGDRTVRVWVQD 311 (312)
Q Consensus 297 ~~~dgd~~v~iw~~~ 311 (312)
+|. |++|+||++.
T Consensus 376 gs~--Dg~i~iW~~~ 388 (393)
T 1erj_A 376 GSG--DCKARIWKYK 388 (393)
T ss_dssp EET--TSEEEEEEEE
T ss_pred ECC--CCcEEECccc
Confidence 995 4699999974
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-47 Score=314.15 Aligned_cols=291 Identities=23% Similarity=0.399 Sum_probs=229.0
Q ss_pred eeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc--ceEEEe-ee-ccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL--ALVHRF-VG-HSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
.+..+++.+|.++|.+++|+|+ +|++|+.|+.|++|++... .....+ .+ |...|.+++|+|++++|++++.|+.
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 4556788999999999999998 9999999999999999874 344444 34 9999999999999999999999999
Q ss_pred EEEEeCCCC------ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC----CeEEEEeeecCcCeEEEEE
Q 021459 88 LRIWDARTP------FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT----GKCTRVIRAHSMPVTSVHF 157 (312)
Q Consensus 88 v~~wd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~~~~ 157 (312)
|++||+... .+.+..+.+|.+.|.+++|+|++++|++++.|++|++||++. .+++..+..|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 999998532 234567789999999999999999999999999999999943 2456778889999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeCCCC--ceeeEcccCCCCcEEEEEECCC--CCEEEEEecCCeEEEEEcCCC--------c
Q 021459 158 NRDGSLIVSGSHDGTCKIWDAGEG--ACLKTLIDDKDPAVSFAKFSPN--GKFILVGTLDSTLKLWNYSAG--------K 225 (312)
Q Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~v~d~~~~--------~ 225 (312)
+|++.+|++++.|+.|++||..++ +.+..+ ..+...+..+.|+|+ +..|++++.|++|++||+..+ .
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 999999999999999999998765 344444 345567888999998 678999999999999998654 2
Q ss_pred EEEEEEc-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchh--ee-ecccCCcc-ceEEEEEcC--CCceEEEee
Q 021459 226 FLKIYTG-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKT--MI-QKLDGHTD-SVISVTCHP--TENKIASAG 298 (312)
Q Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~-~~~~~h~~-~v~~l~~~p--~~~~l~~~~ 298 (312)
....+.. |.....++ .+. + +.+|++++.||.|++||..+++ .. ....+|.. .|.+++|+| +++.|+++|
T Consensus 241 ~~~~~~~~h~~~v~~v--~~s-~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 241 CEAILPDVHKRQVYNV--AWG-F-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEECCSCCSSCEEEE--EEC-T-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred EeeecccccccceEEE--EEc-C-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 2333333 55444443 233 3 4589999999999999987653 23 23467877 899999999 688999999
Q ss_pred ecCCeeEEEEeec
Q 021459 299 LDGDRTVRVWVQD 311 (312)
Q Consensus 299 ~dgd~~v~iw~~~ 311 (312)
.| ++|+||++.
T Consensus 317 ~D--g~v~~W~~~ 327 (330)
T 2hes_X 317 DD--GIVNFWSLE 327 (330)
T ss_dssp TT--SEEEEEEC-
T ss_pred CC--CcEEEEEec
Confidence 55 699999975
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-46 Score=336.32 Aligned_cols=291 Identities=24% Similarity=0.338 Sum_probs=251.2
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc--ceEEEeeeccCCEEEEEEccCCCeEEEEcCC----C
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL--ALVHRFVGHSEGISDLAWSSDSHYICSASDD----R 86 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 86 (312)
....++.+|.+.|++++|+|+|++||+|+.|++|+|||..++ .....+.+|...|.+++|+|++++|++++.+ +
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCcee
Confidence 345678899999999999999999999999999999998654 3455678899999999999999999988765 4
Q ss_pred eEEEEeCCCCceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEE
Q 021459 87 TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
.|++||... ....+.+|.+.|.+++|+|++. .|++++.|++|++||..+++....+..|...|.+++|+|++++|+
T Consensus 130 ~v~~wd~~~---~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 130 HVFLFDTGT---SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp EEEETTTCC---BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEEeeCCC---CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEE
Confidence 788888543 3556789999999999999986 699999999999999999998889999999999999999999999
Q ss_pred EeeCCCeEEEEeCCCCceeeEccc------CCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce-e
Q 021459 166 SGSHDGTCKIWDAGEGACLKTLID------DKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK-Y 238 (312)
Q Consensus 166 ~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~ 238 (312)
+++.|+.|++||..+++....+.. .+...+..++|+|++++|++++.|++|++||+.+++.+..+..+.... .
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 999999999999998887766632 456678899999999999999999999999999998887776442221 1
Q ss_pred EEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 239 CITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.....+ ++..+++++.||.|++||...+.....+.+|...|.+++|+|++++|++++.| ++|++|++.
T Consensus 287 ~~~~~~---~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D--~~v~~Wd~~ 354 (611)
T 1nr0_A 287 QLGIIW---TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE--GHINSWDIS 354 (611)
T ss_dssp EEEEEE---CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEETT
T ss_pred eEEEEE---cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC--CcEEEEECC
Confidence 222222 57889999999999999998888788889999999999999999999999955 599999863
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-46 Score=336.36 Aligned_cols=290 Identities=23% Similarity=0.378 Sum_probs=241.5
Q ss_pred eeeecccccceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGT-LLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
..++.+|.+.|++++|+|++. .|++|+.|++|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 346789999999999999987 6999999999999999999888899999999999999999999999999999999998
Q ss_pred CCCceeeeeee-------cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE----------------------
Q 021459 94 RTPFDCLKTLR-------GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV---------------------- 144 (312)
Q Consensus 94 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~---------------------- 144 (312)
.++. .+..+. +|.+.|.+++|+|++++|++++.|++|++||+++++....
T Consensus 220 ~~g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 220 VDGT-KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp TTCC-EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred CCCc-EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 7753 344442 7999999999999999999999999999999988765432
Q ss_pred ---------------------eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEccc--------------
Q 021459 145 ---------------------IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLID-------------- 189 (312)
Q Consensus 145 ---------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------- 189 (312)
+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+..
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 346888999999999999999999999999999876643221100
Q ss_pred -------------------------------------------------------------------CCCCcEEEEEECC
Q 021459 190 -------------------------------------------------------------------DKDPAVSFAKFSP 202 (312)
Q Consensus 190 -------------------------------------------------------------------~~~~~~~~~~~~~ 202 (312)
.+...+..++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0012245678999
Q ss_pred CCCEEEEEecCCeEEEEEcCCCcEE--EEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc-hheeec--ccC
Q 021459 203 NGKFILVGTLDSTLKLWNYSAGKFL--KIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ-KTMIQK--LDG 277 (312)
Q Consensus 203 ~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~--~~~ 277 (312)
+|++|++|+.|+.|++||+.++... .. ..|.....+ ..+.+++++|++++.|+.|++||+.+ .+.... +.+
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~---v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~ 534 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITS---VAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF 534 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEE---EEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCC
T ss_pred CCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEE---EEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeee
Confidence 9999999999999999999876542 23 456555333 34458899999999999999999987 444443 345
Q ss_pred CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 278 HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 278 h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|...|.+++|+|++++|+++|.| ++|++|+++
T Consensus 535 H~~~V~~v~fspdg~~lasgs~D--~~v~lW~~~ 566 (611)
T 1nr0_A 535 HTAKVACVSWSPDNVRLATGSLD--NSVIVWNMN 566 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT--SCEEEEETT
T ss_pred cccceeEEEECCCCCEEEEEECC--CcEEEEECC
Confidence 99999999999999999999955 699999974
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-45 Score=309.00 Aligned_cols=289 Identities=25% Similarity=0.369 Sum_probs=234.6
Q ss_pred eeceeeecccccceEEEEE-----CC-CCCEEEEEeCCCeEEEEeCCC-------cceEEEeeeccCCEEEEEEccCCCe
Q 021459 12 YRHFKTLTAHSRAVSCVKF-----SN-DGTLLASASLDKTVIIWSASS-------LALVHRFVGHSEGISDLAWSSDSHY 78 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~-----s~-~~~~l~t~~~d~~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~ 78 (312)
+....++.+|.+.|++++| +| ++++|++|+.|++|++|++.. +.....+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 4566789999999999999 77 999999999999999999864 3455678899999999999999999
Q ss_pred EEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee---ecCcCeEEE
Q 021459 79 ICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR---AHSMPVTSV 155 (312)
Q Consensus 79 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~---~~~~~v~~~ 155 (312)
|++++.|+.|++||++++ +.+..+.+|...|.+++|+|+++.+++++.|++|++||+..... .... .|...+.++
T Consensus 91 l~s~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTG-TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEETTSEEEEEETTSS-CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EECCTTTSCSSCEEEE
T ss_pred EEEEcCCCcEEEEECCCC-cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eeeecccCCCceeeee
Confidence 999999999999999875 55777889999999999999999999999999999999985433 3322 678889999
Q ss_pred EEccCC----------CEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC-
Q 021459 156 HFNRDG----------SLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG- 224 (312)
Q Consensus 156 ~~~~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~- 224 (312)
+|+|++ .++++++.|+.|++||.. .+....+. .+...+..++|+|++++|++++.|+.|++||+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFK-AHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEc-CccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 999987 789999999999999943 44444443 45567888999999999999999999999999543
Q ss_pred cEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheee--cc-----------cCCccceEEEEEcCCC
Q 021459 225 KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQ--KL-----------DGHTDSVISVTCHPTE 291 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~-----------~~h~~~v~~l~~~p~~ 291 (312)
.....+. +... +......+++.++++ +.|+.|++||+.+.+... .+ .+|...|.+++|+|++
T Consensus 247 ~~~~~~~-~~~~---v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 321 (343)
T 2xzm_R 247 YPQREFD-AGST---INQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG 321 (343)
T ss_dssp SCSEEEE-CSSC---EEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS
T ss_pred ccceeec-CCCc---EEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC
Confidence 3333332 2222 233334567777765 467789999997654432 22 2688899999999999
Q ss_pred ceEEEeeecCCeeEEEEeec
Q 021459 292 NKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 292 ~~l~~~~~dgd~~v~iw~~~ 311 (312)
++|++++.| ++|++|+++
T Consensus 322 ~~l~sg~~D--g~v~~w~~~ 339 (343)
T 2xzm_R 322 KKLFAGFTD--GVIRTFSFE 339 (343)
T ss_dssp CCEEEEETT--SEEEEEEEE
T ss_pred CeEEEecCC--ceEEEEEEE
Confidence 999999955 699999874
No 17
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-44 Score=302.15 Aligned_cols=292 Identities=22% Similarity=0.339 Sum_probs=252.7
Q ss_pred ceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEE
Q 021459 11 PYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRI 90 (312)
Q Consensus 11 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~ 90 (312)
.......+.+|.+.|++++|+|++++|++++.||.|++|+..+++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecC-----CcEEEEEcCCCe-----------EEEEeeecCc--Ce
Q 021459 91 WDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD-----ESIRIWEVKTGK-----------CTRVIRAHSM--PV 152 (312)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~-----------~~~~~~~~~~--~v 152 (312)
||+.+. +.+..+. +...+.+++|+|+++.+++++.+ +.|++||+..+. ....+..|.. .+
T Consensus 101 wd~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 101 WDVSNG-QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EETTTC-CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EECCCC-cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 999875 4455555 78899999999999999999998 999999997653 2233444554 89
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeCCC-CceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 153 TSVHFNRDGSLIVSGSHDGTCKIWDAGE-GACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
.+++|+|+++++++++.||.|++||+++ ......+. .+...+..+.|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 9999999999999999999999999998 45555443 455678889999999999999999999999999999888776
Q ss_pred ccCCceeEEEEEEEccCCcEEEEeecCC--------------eEEEEECCchheeecccCCccceEEEEEcCCCceEEEe
Q 021459 232 GHTNKKYCITSTFSVTNGKYIVSGSEDN--------------CVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASA 297 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~ 297 (312)
. ... +......++++++++++.++ .+++||+.+.+.+..+.+|...|.+++|+|++++|+++
T Consensus 258 ~-~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 258 T-DCP---LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp C-SSC---EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred C-CCC---ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 3 232 33334557899999999988 89999999999999999999999999999999999999
Q ss_pred eecCCeeEEEEeec
Q 021459 298 GLDGDRTVRVWVQD 311 (312)
Q Consensus 298 ~~dgd~~v~iw~~~ 311 (312)
+.| ++|++|+++
T Consensus 334 ~~d--g~v~iw~~~ 345 (369)
T 3zwl_B 334 GED--GFIRLHHFE 345 (369)
T ss_dssp ETT--SEEEEEEEC
T ss_pred cCC--CeEEEEECc
Confidence 955 599999975
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.1e-44 Score=320.35 Aligned_cols=283 Identities=38% Similarity=0.615 Sum_probs=249.4
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
..+.+.+|...|.+++|+|++++|++++.|+.|++|+.... .+..+.+|...|.+++|+|++++|++++.|+.+++||.
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 34667899999999999999999999999999999997654 45677889999999999999999999999999999996
Q ss_pred CCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeE
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTC 173 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
.. +.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|..+|++++|+|+++++++++.|+.|
T Consensus 374 ~~--~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 374 NG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp TC--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CC--CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE
Confidence 43 456778889999999999999999999999999999995 567778888999999999999999999999999999
Q ss_pred EEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEE
Q 021459 174 KIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 174 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
++||.. ++.+..+.. +...+..++|+|++++|++++.|+.|++||. +++.+..+.+|.....++ ...+++++|+
T Consensus 451 ~~w~~~-~~~~~~~~~-~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l---~~s~dg~~l~ 524 (577)
T 2ymu_A 451 KLWNRN-GQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV---AFSPDGQTIA 524 (577)
T ss_dssp EEEETT-SCEEEEEEC-CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEE---EECTTSSCEE
T ss_pred EEEECC-CCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEE---EEcCCCCEEE
Confidence 999964 455555543 4567888999999999999999999999995 678888888888765444 3457899999
Q ss_pred EeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 254 SGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
+++.||.|++||. +++.+..+.+|.+.|.+++|+|++++|+++|.| ++|++|+
T Consensus 525 s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D--~~i~~Wd 577 (577)
T 2ymu_A 525 SASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD--KTVKLWN 577 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred EEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC--CEEEEeC
Confidence 9999999999996 567788899999999999999999999999954 6999996
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-44 Score=298.32 Aligned_cols=253 Identities=22% Similarity=0.391 Sum_probs=219.6
Q ss_pred ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEE
Q 021459 55 ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIW 134 (312)
Q Consensus 55 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~w 134 (312)
+....+.+|.+.|.+++|+|++++|++++.||.|++||+.+. ..+..+..|...|.+++|+|+++++++++.|++|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 345678899999999999999999999999999999999875 5577888899999999999999999999999999999
Q ss_pred EcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECC-CCCEEEEEecC
Q 021459 135 EVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSP-NGKFILVGTLD 213 (312)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d 213 (312)
|+++++.+..+..|...|.+++|+|+++++++|+.|+.|++||++++.........+...+..++|+| ++..|++|+.|
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999887555444555667788999999 67899999999
Q ss_pred CeEEEEEcCCCcEEEEEEc-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCc
Q 021459 214 STLKLWNYSAGKFLKIYTG-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN 292 (312)
Q Consensus 214 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~ 292 (312)
+.|++||++.+.....+.. +......+.. ...+++.+|++|+.||.|++||+++++.+..+.+|...|.+++|+|+++
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDY-YPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEE-CCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEE-EEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 9999999987765444443 3333333322 1124678999999999999999999999999999999999999999999
Q ss_pred eEEEeeecCCeeEEEEeec
Q 021459 293 KIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 293 ~l~~~~~dgd~~v~iw~~~ 311 (312)
.|++++.| ++|++|+..
T Consensus 242 ~l~s~s~D--g~i~iWd~~ 258 (304)
T 2ynn_A 242 IIISGSED--GTLKIWNSS 258 (304)
T ss_dssp EEEEEETT--SCEEEEETT
T ss_pred EEEEEcCC--CeEEEEECC
Confidence 99999955 699999963
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-43 Score=294.06 Aligned_cols=290 Identities=27% Similarity=0.410 Sum_probs=241.8
Q ss_pred eceeeecccccceEEEEECCC-CCEEEEEeCCCeEEEEeCCCc-----ceEEEeeeccCCEEEEEEccCCCeEEEEcCCC
Q 021459 13 RHFKTLTAHSRAVSCVKFSND-GTLLASASLDKTVIIWSASSL-----ALVHRFVGHSEGISDLAWSSDSHYICSASDDR 86 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~-~~~l~t~~~d~~i~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 86 (312)
....+|.+|++.|++++|+|+ +++|+||+.|++|++||+... .+...+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 445579999999999999997 689999999999999998754 34567789999999999999999999999999
Q ss_pred eEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEE-EeeecCcCeEEEEEccCC--CE
Q 021459 87 TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTR-VIRAHSMPVTSVHFNRDG--SL 163 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~ 163 (312)
.|++|+.... ........+...+....++++++.+++++.|+.+++||+....... ....|...+..++|++++ .+
T Consensus 109 ~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 109 TLRLWDLTTG-TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEEETTTT-EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred cceEEeeccc-ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 9999998875 4445556677788899999999999999999999999998765433 445788899999998865 57
Q ss_pred EEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEE
Q 021459 164 IVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITST 243 (312)
Q Consensus 164 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
+++++.|+.|++||+++++....+.. +...+..++|+|++++|++++.|+.|++||+++.+.+..+..+.. +...
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----v~~~ 262 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI----INAL 262 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC----EEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce----EEee
Confidence 88999999999999999888777654 456788899999999999999999999999999998887775532 3333
Q ss_pred EEccCCcEEEEeecCCeEEEEECCchheeecc---------cCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 244 FSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKL---------DGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 244 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
...+++ .+++++.|+.|++||++....+..+ .+|...|.+++|+|++++|++++.| ++|+||++.
T Consensus 263 ~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D--g~v~iW~~~ 336 (340)
T 4aow_A 263 CFSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD--NLVRVWQVT 336 (340)
T ss_dssp EECSSS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT--SCEEEEEEE
T ss_pred ecCCCC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC--CEEEEEeCC
Confidence 344555 4566778999999999876655443 4688899999999999999999955 589999974
No 21
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-43 Score=291.75 Aligned_cols=289 Identities=26% Similarity=0.404 Sum_probs=251.7
Q ss_pred CCCceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 8 PYKPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 8 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
++.+++..+++.+|.+.|++++| |++++|++++.||.|++|+..+.+....+..|...|.+++|+|++++|++++.|+.
T Consensus 4 ~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 4 PFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp -CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred ccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCe
Confidence 45667788899999999999999 99999999999999999999999888889999999999999999999999999999
Q ss_pred EEEEeCCCCc--eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc-CCCEE
Q 021459 88 LRIWDARTPF--DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR-DGSLI 164 (312)
Q Consensus 88 v~~wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 164 (312)
+++|++.... +....+.+|...|.+++| +++.+++++.||.|++|| .++....+..|..++.++.+.| +++++
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 9999986532 445667889999999999 567999999999999999 6677788888999999999998 89999
Q ss_pred EEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEE
Q 021459 165 VSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTF 244 (312)
Q Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
++++.|+.+++||. .+....+...+...+..+.++|++. +++++.|+.|++||+++++.+..+..|.....++ .
T Consensus 159 ~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~---~ 232 (313)
T 3odt_A 159 LTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI---K 232 (313)
T ss_dssp EEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE---E
T ss_pred EEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE---E
Confidence 99999999999994 3445555554667788999999998 8999999999999999999999888887765444 3
Q ss_pred EccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 245 SVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 245 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
..+++ .|++++.||.|++||+.+++....+..|...|.+++|+|+++ +++++. |+.|++|++.
T Consensus 233 ~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--dg~i~iw~~~ 295 (313)
T 3odt_A 233 LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSS--DNLVRIFSQE 295 (313)
T ss_dssp ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEET--TSCEEEEESC
T ss_pred EecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeC--CCcEEEEeCC
Confidence 34566 588999999999999999999999999999999999999997 666774 4699999974
No 22
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-44 Score=306.79 Aligned_cols=291 Identities=14% Similarity=0.272 Sum_probs=241.6
Q ss_pred ceeceeeecccccceEEEEECCCC-CEEEEEeCCCeEEEEeCCCcceEEEee--eccCCEEEEEEcc-CCCeEEEEcCCC
Q 021459 11 PYRHFKTLTAHSRAVSCVKFSNDG-TLLASASLDKTVIIWSASSLALVHRFV--GHSEGISDLAWSS-DSHYICSASDDR 86 (312)
Q Consensus 11 ~~~~~~~~~~h~~~v~~~~~s~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~ 86 (312)
++...+.+.+|...|++++|+|++ ++|++|+.||.|++|+..+++....+. +|...|.+++|+| ++++|++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 355667889999999999999999 999999999999999999887766654 6999999999999 689999999999
Q ss_pred eEEEEeCCCCceeeeeeec---ccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-
Q 021459 87 TLRIWDARTPFDCLKTLRG---HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS- 162 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~- 162 (312)
.|++||+.. ..+..+.. |...+.+++|+|+++.+++++.|+.|++||+ +++.+..+..|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 142 ATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEEEECCC--CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCC
Confidence 999999985 33444433 4478999999999999999999999999999 4677888889999999999999999
Q ss_pred EEEEeeCCCeEEEEeCCC----CceeeEcccCCCCcEEEEEECC-CCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce
Q 021459 163 LIVSGSHDGTCKIWDAGE----GACLKTLIDDKDPAVSFAKFSP-NGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK 237 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 237 (312)
++++++.|+.|++||+++ +.....+ .+...+..++|+| ++.+|++++.|+.|++||+++++....+..+....
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 296 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ 296 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc
Confidence 999999999999999987 4444444 3566788999999 99999999999999999999887665555443110
Q ss_pred ----e----------EEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccC--CccceEEEEEcCCCceEEEeeecC
Q 021459 238 ----Y----------CITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG--HTDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 238 ----~----------~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
. .+......+++++ +|+.||.|++||+.+++.+..+.+ |...+..++|+|++++|++++ |
T Consensus 297 ~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d- 372 (383)
T 3ei3_B 297 FQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-G- 372 (383)
T ss_dssp CTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-T-
T ss_pred cccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-C-
Confidence 0 0111222345555 788999999999999988888887 456778889999999999886 4
Q ss_pred CeeEEEEeec
Q 021459 302 DRTVRVWVQD 311 (312)
Q Consensus 302 d~~v~iw~~~ 311 (312)
++|++|+++
T Consensus 373 -~~i~iw~~~ 381 (383)
T 3ei3_B 373 -FNILIWNRE 381 (383)
T ss_dssp -TEEEEEECC
T ss_pred -CcEEEEecC
Confidence 689999975
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-44 Score=324.71 Aligned_cols=290 Identities=27% Similarity=0.421 Sum_probs=239.6
Q ss_pred ceeeecccccceEEEEECCCC-CEEEEEeCCCeEEEEeCCCc-----ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 14 HFKTLTAHSRAVSCVKFSNDG-TLLASASLDKTVIIWSASSL-----ALVHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~-~~l~t~~~d~~i~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
....+.+|.+.|++++|+|++ ++|+||+.|++|++|++... .....+.+|...|.+++|+|++++|++|+.|+.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 345688999999999999865 79999999999999998753 345678899999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe---eecCcCeEEEEEccCC--C
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI---RAHSMPVTSVHFNRDG--S 162 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~---~~~~~~v~~~~~~~~~--~ 162 (312)
|++||+.+. .....+.+|...|.+++|+|+++.|++++.|++|++||+......... ..|...|.+++|+|++ .
T Consensus 454 v~vwd~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 454 LRLWDLAAG-VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEETTTT-EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEEECCCC-cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 999999875 556778899999999999999999999999999999998765443332 3577889999999987 5
Q ss_pred EEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEE
Q 021459 163 LIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITS 242 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
.+++++.|+.|++||+++++....+.. +...+..++|+|++++|++++.|+.|++||+++++.+..+..+. . +..
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~-~---v~~ 607 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAG-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-V---IHA 607 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS-C---EEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC-c---EEE
Confidence 899999999999999998887766544 55678889999999999999999999999999998776654432 2 333
Q ss_pred EEEccCCcEEEEeecCCeEEEEECCchheeecccCCc-------------------cceEEEEEcCCCceEEEeeecCCe
Q 021459 243 TFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHT-------------------DSVISVTCHPTENKIASAGLDGDR 303 (312)
Q Consensus 243 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-------------------~~v~~l~~~p~~~~l~~~~~dgd~ 303 (312)
....+++.++++++ ++.|++||+.++..+..+..+. ..+.+++|+|++++|++++.| +
T Consensus 608 ~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D--g 684 (694)
T 3dm0_A 608 LCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD--G 684 (694)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT--S
T ss_pred EEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC--C
Confidence 34456777777665 5669999999887766554321 237899999999999999955 6
Q ss_pred eEEEEeecC
Q 021459 304 TVRVWVQDR 312 (312)
Q Consensus 304 ~v~iw~~~~ 312 (312)
+|++|++.|
T Consensus 685 ~i~iW~i~~ 693 (694)
T 3dm0_A 685 VIRVWGIGR 693 (694)
T ss_dssp EEEEEEC--
T ss_pred eEEEEeccC
Confidence 999999875
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3e-44 Score=302.32 Aligned_cols=298 Identities=19% Similarity=0.317 Sum_probs=240.9
Q ss_pred CCCCceeceeeecccccceEEEEECCC----CCEEEEEeCCCeEEEEeCCCcceEEEeee-----ccCCEEEEEEccC--
Q 021459 7 PPYKPYRHFKTLTAHSRAVSCVKFSND----GTLLASASLDKTVIIWSASSLALVHRFVG-----HSEGISDLAWSSD-- 75 (312)
Q Consensus 7 ~~~~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~t~~~d~~i~vw~~~~~~~~~~~~~-----~~~~v~~~~~~~~-- 75 (312)
|+|+-........+|..+|++++|+|+ ...+++++.++.|++|+..+++.+..+.. |...|.+++|+|+
T Consensus 3 ~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 82 (366)
T 3k26_A 3 CKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN 82 (366)
T ss_dssp --CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT
T ss_pred ceeEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC
Confidence 444433223445689999999999984 45666666777999999998877766665 4477999999998
Q ss_pred --CCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEe---eecC
Q 021459 76 --SHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVI---RAHS 149 (312)
Q Consensus 76 --~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~---~~~~ 149 (312)
+++|++|+.|+.|++||+.+. +.+..+.+|...|.+++|+| +++.+++++.||.|++||+++++....+ ..|.
T Consensus 83 ~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 83 TSHPLLAVAGSRGIIRIINPITM-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp TCCEEEEEEETTCEEEEECTTTC-CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred CCCCEEEEecCCCEEEEEEchhc-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 679999999999999999875 55777888999999999999 8999999999999999999999988887 6789
Q ss_pred cCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEccc---------------------------CCCCcEEEEEECC
Q 021459 150 MPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLID---------------------------DKDPAVSFAKFSP 202 (312)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ 202 (312)
..|.+++|+|+++++++++.|+.|++||+++++....+.. .+...+..+.|+
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 9999999999999999999999999999987654432221 144556677787
Q ss_pred CCCEEEEEecCCeEEEEEcCCCcE--------------EEEEEccCCceeEEEEEEEccC--CcEEEEeecCCeEEEEEC
Q 021459 203 NGKFILVGTLDSTLKLWNYSAGKF--------------LKIYTGHTNKKYCITSTFSVTN--GKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 203 ~~~~l~~~~~d~~i~v~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~ 266 (312)
++++++++.|+.|++||+.++.. +..+..|.....++.. .++ +++|++|+.||.|++||+
T Consensus 241 -~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~~~l~~~~~dg~i~vwd~ 316 (366)
T 3k26_A 241 -GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF---SMDFWQKMLALGNQVGKLYVWDL 316 (366)
T ss_dssp -TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC---EECTTSSEEEEECTTSCEEEEEC
T ss_pred -CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE---cCCCCCcEEEEEecCCcEEEEEC
Confidence 77999999999999999987643 5566666655444432 245 899999999999999999
Q ss_pred Cchhee----ecccCC--ccceEEEEEcCCCceEEEeeecCCeeEEEEeecC
Q 021459 267 QQKTMI----QKLDGH--TDSVISVTCHPTENKIASAGLDGDRTVRVWVQDR 312 (312)
Q Consensus 267 ~~~~~~----~~~~~h--~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~~ 312 (312)
.+++.. ..+.+| ...|.+++|+|++++|++++.| +.|++|++.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--g~i~iwd~~~ 366 (366)
T 3k26_A 317 EVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD--ASIWRWDRLR 366 (366)
T ss_dssp CSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT--SEEEEEEC--
T ss_pred CCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCC--CEEEEEEecC
Confidence 876543 367777 7899999999999999999955 6999999865
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7e-44 Score=303.76 Aligned_cols=292 Identities=17% Similarity=0.244 Sum_probs=250.1
Q ss_pred eeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc------eEEEeeeccCCEEEEEEccC----C---Ce
Q 021459 12 YRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA------LVHRFVGHSEGISDLAWSSD----S---HY 78 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~ 78 (312)
....+.+.+|.+.|++++|+| ++|++++.||.|++|+..+.+ .+..+.+|...|.+++|+|+ + ++
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 344567889999999999999 899999999999999999887 77888999999999999999 9 99
Q ss_pred EEEEcCCCeEEEEeCCCCce----eeeeeecc-----cccEEEEEEe----cCCCE-EEEeecCCcEEEEEcCC------
Q 021459 79 ICSASDDRTLRIWDARTPFD----CLKTLRGH-----SDFVFCVNFN----PQSNL-IVSGSFDESIRIWEVKT------ 138 (312)
Q Consensus 79 l~~~~~d~~v~~wd~~~~~~----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~~wd~~~------ 138 (312)
|++++.|+.|++||+.+... ....+..| ...|.+++|+ |+++. |++++.||.|++||+++
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999876432 15666777 5899999999 99999 99999999999999988
Q ss_pred CeEEE-----Eee-------ecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccC--C---CCcEEEEEEC
Q 021459 139 GKCTR-----VIR-------AHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDD--K---DPAVSFAKFS 201 (312)
Q Consensus 139 ~~~~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~---~~~~~~~~~~ 201 (312)
++.+. .+. .|...+.+++|+|++ ++++++.|+.|++||+++++.+..+... + ...+..++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 55554 553 378889999999999 9999999999999999998877766540 3 5668889999
Q ss_pred CCCCEEEEEecC---CeEEEEEcCCCcEEEEEEc-------------cCCceeEEEEEEEccCCcEEEEeecCCeEEEEE
Q 021459 202 PNGKFILVGTLD---STLKLWNYSAGKFLKIYTG-------------HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWD 265 (312)
Q Consensus 202 ~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 265 (312)
|++++|++++.| +.|++||+++++.+..+.. |.....+ ....+++++|++++.||.|++||
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS---LSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE---EEECSSSSEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE---EEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999 9999999999998888877 6655433 33457899999999999999999
Q ss_pred CCchheeeccc------CC---------------ccceEEEEEcCCC----------ceEEEeeecCCeeEEEEeec
Q 021459 266 LQQKTMIQKLD------GH---------------TDSVISVTCHPTE----------NKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 266 ~~~~~~~~~~~------~h---------------~~~v~~l~~~p~~----------~~l~~~~~dgd~~v~iw~~~ 311 (312)
+.+.+.+..+. +| ...|.+++|+|++ +.|++++.| ++|++|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d--g~i~iw~~~ 394 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD--RSIRWFREA 394 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT--TEEEEEEEE
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC--CcEEEEEcC
Confidence 99998888888 78 8999999999998 789999855 699999974
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-42 Score=289.55 Aligned_cols=283 Identities=20% Similarity=0.306 Sum_probs=243.5
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE---EEee--eccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 18 LTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALV---HRFV--GHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
..+|...|++++|+|++++|++++ ||.|++|+..+.+.. ..+. +|...|.+++|+|++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 347999999999999999999998 999999999876432 2223 6889999999999999999999999999999
Q ss_pred CCCCce-eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCC
Q 021459 93 ARTPFD-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDG 171 (312)
Q Consensus 93 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
+.+... ....+..|...+.+++|+|+++.+++++.||.|++||+++++....+..|...+.+++|+|+++++++++.|+
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC
Confidence 987532 4456778889999999999999999999999999999999999999989999999999999999999999999
Q ss_pred eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcE
Q 021459 172 TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKY 251 (312)
Q Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
.|++||+++++....+. ....+..+.|+|+++++++++.++.|++||+++++.. .+..|..... .....+++++
T Consensus 206 ~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~---~~~~~~~~~~ 279 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVL---SLKFAYCGKW 279 (337)
T ss_dssp EEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEE---EEEECTTSSE
T ss_pred cEEEEECCCCceEeeec--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCcccee---EEEECCCCCE
Confidence 99999999988776653 3456788899999999999999999999999887754 3445555433 3344578999
Q ss_pred EEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 252 IVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 252 l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
|++++.||.|++||+.+++.+.. ..|...|.+++|+|++++|++++. |++|++|++
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~ 335 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSG--DKKATVYEV 335 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEET--TSCEEEEEE
T ss_pred EEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecC--CCeEEEEEE
Confidence 99999999999999998777644 347889999999999999999995 469999986
No 27
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.8e-43 Score=296.46 Aligned_cols=287 Identities=19% Similarity=0.264 Sum_probs=240.2
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 18 LTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
+..|.++|++++|+|++++|++++.|+.|++|+..+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 44599999999999999999999999999999998887 7888899999999999999999999999999999999976
Q ss_pred Cce-eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE---E-EEeeecCcCeEEEEEccCCCEEEEeeCC
Q 021459 96 PFD-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC---T-RVIRAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 96 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
... ....+..|...+.+++|+|+++++++++.|+.|++||++.++. . .....|...+.+++|+|+++++++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 531 2233467889999999999999999999999999999987752 2 2335678899999999999999999999
Q ss_pred CeEEEEeCC------------------CCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc
Q 021459 171 GTCKIWDAG------------------EGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG 232 (312)
Q Consensus 171 ~~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 232 (312)
+.|++||++ .++....+. .+...+..+.|+|++++|++++.|+.|++||+++++.+..+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999954 455555543 3456788899999999999999999999999999999988888
Q ss_pred cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc--hh----------------------ee----------------
Q 021459 233 HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ--KT----------------------MI---------------- 272 (312)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~----------------------~~---------------- 272 (312)
+.....++ ...+++.++++| .||.|++|++.+ +. ..
T Consensus 243 ~~~~v~~~---~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (372)
T 1k8k_C 243 ETLPLLAV---TFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 318 (372)
T ss_dssp SSCCEEEE---EEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred CCCCeEEE---EEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence 77654444 233678888877 999999999976 31 00
Q ss_pred ecc-cCCccceEEEEEc-CCC---ceEEEeeecCCeeEEEEeec
Q 021459 273 QKL-DGHTDSVISVTCH-PTE---NKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 273 ~~~-~~h~~~v~~l~~~-p~~---~~l~~~~~dgd~~v~iw~~~ 311 (312)
..+ .+|...|.+++|+ +++ ++|+++|.| ++|++|++.
T Consensus 319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D--g~i~~W~~~ 360 (372)
T 1k8k_C 319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD--GGMSIWDVR 360 (372)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT--SEEEEEEHH
T ss_pred ccccccccCCcceeEEecCCCcceeeEEEecCC--CceEEEEec
Confidence 233 4899999999976 566 899999955 699999873
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-42 Score=308.89 Aligned_cols=285 Identities=38% Similarity=0.625 Sum_probs=249.9
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
+....+.+|...|++++|+|+++.|++++.|+.|++|+.. ++.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 3456788999999999999999999999999999999964 566778889999999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCe
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGT 172 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
... ..+..+.+|...+.+++|+|+++.+++++.|+.|++||. +++.+..+..|..+|.+++|+|++++|++++.|+.
T Consensus 332 ~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 332 RNG--QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp TTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCC--CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 865 345667889999999999999999999999999999995 56777888899999999999999999999999999
Q ss_pred EEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEE
Q 021459 173 CKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYI 252 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
|++||. +++.+..+.. +...+..++|+|++++|++++.|+.|++||. +++.+..+.+|.....++ ...+++++|
T Consensus 409 v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~---~~spd~~~l 482 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV---AFSPDGQTI 482 (577)
T ss_dssp EEEECT-TCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEE---EECTTSCEE
T ss_pred EEEEeC-CCCEEEEecC-CCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEE---EEcCCCCEE
Confidence 999995 4555555543 4567888999999999999999999999996 567777788887764443 345789999
Q ss_pred EEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 253 VSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 253 ~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.| ++|++|+.
T Consensus 483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d--g~v~lwd~ 537 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD--KTVKLWNR 537 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT--SEEEEECT
T ss_pred EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECc--CEEEEEeC
Confidence 99999999999995 567788899999999999999999999999955 69999985
No 29
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=297.79 Aligned_cols=291 Identities=13% Similarity=0.268 Sum_probs=236.6
Q ss_pred eeeecccccceEEEEECCCCCEE-EEEeC---CCeEEEEeCCCcceEEE-eeeccCCEEEEEEccC---CCeEEEEcCCC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLL-ASASL---DKTVIIWSASSLALVHR-FVGHSEGISDLAWSSD---SHYICSASDDR 86 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l-~t~~~---d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~~~~d~ 86 (312)
...+.+|...|++++|+|+++.+ ++++. |+.|++|++.+++.... ..+|...|.+++|+|+ +++|++++.|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 34567899999999999999655 56655 89999999998876544 3479999999999998 69999999999
Q ss_pred eEEEEeCCCCceeeeeeecccccEEEEEE------ecCCCEEEEeecCCcEEEEEcCCCe-EEEEeeecCc----CeEEE
Q 021459 87 TLRIWDARTPFDCLKTLRGHSDFVFCVNF------NPQSNLIVSGSFDESIRIWEVKTGK-CTRVIRAHSM----PVTSV 155 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~~----~v~~~ 155 (312)
.|++||+.+....+..+.+|...|.++.| +|+++.|++++.||.|++||+++++ ....+..|.. .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999998765467788899999999955 6789999999999999999999876 5666655544 78888
Q ss_pred E----EccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECC---CCCEEEEEecCCeEEEEEcCCCcEEE
Q 021459 156 H----FNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSP---NGKFILVGTLDSTLKLWNYSAGKFLK 228 (312)
Q Consensus 156 ~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~ 228 (312)
. |+|+++++++++.|+.|++||+++++..... .+...+..+.|+| ++.+|++++.|+.|++||+++++...
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 8 7889999999999999999999988765432 3456788899999 99999999999999999998765433
Q ss_pred EE-----EccCCceeEEEEEEEccCCc-EEEEeecCCeEEEEECCch-------------------heeecccCCccceE
Q 021459 229 IY-----TGHTNKKYCITSTFSVTNGK-YIVSGSEDNCVYVWDLQQK-------------------TMIQKLDGHTDSVI 283 (312)
Q Consensus 229 ~~-----~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~ 283 (312)
.+ ..|.....++ ...+++. +|++++.||.|++||+... +.+..+.+|...|.
T Consensus 249 ~~~~~~~~~~~~~v~~~---~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQV---RHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp EEEEEEEECCSSCEEEE---EEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred ceeeeccCCCcCCEEEE---EECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 22 3666654443 3336666 8999999999999998643 34566788999999
Q ss_pred EEEEcCCCceEE-EeeecCCeeEEEEeecC
Q 021459 284 SVTCHPTENKIA-SAGLDGDRTVRVWVQDR 312 (312)
Q Consensus 284 ~l~~~p~~~~l~-~~~~dgd~~v~iw~~~~ 312 (312)
+++|+|+++.|+ +++. |++|++|++.+
T Consensus 326 ~~~~s~~~~~l~~s~~~--d~~i~iw~~~~ 353 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSF--DQTVRVLIVTK 353 (357)
T ss_dssp EEEECSSSTTEEEEEET--TSEEEEEEECC
T ss_pred EEEEcCCCCeEEEEecC--CCcEEEEECCC
Confidence 999999999998 6774 46999999853
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=288.97 Aligned_cols=248 Identities=24% Similarity=0.417 Sum_probs=225.5
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
...+.+|...|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.+++|+++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 95 TPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
+.. ....+..|...+.+++|+|++++|++++.||.|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|+
T Consensus 153 ~~~-~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 153 SGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp TCS-EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CCc-eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 763 4556777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEE
Q 021459 175 IWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVS 254 (312)
Q Consensus 175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (312)
+||++++.....+.. +...+..++|+|++++|++++.|+.|++||+.+++.+..+.+|......+ ...+++.+|++
T Consensus 232 iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v---~~s~~g~~l~s 307 (321)
T 3ow8_A 232 IYDVQHANLAGTLSG-HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV---KYNGNGSKIVS 307 (321)
T ss_dssp EEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE---EECTTSSEEEE
T ss_pred EEECCCcceeEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEE---EECCCCCEEEE
Confidence 999998887766644 45668889999999999999999999999999999999988887765444 34578999999
Q ss_pred eecCCeEEEEECC
Q 021459 255 GSEDNCVYVWDLQ 267 (312)
Q Consensus 255 ~~~dg~i~iwd~~ 267 (312)
++.||.|++||..
T Consensus 308 ~~~d~~i~vwd~p 320 (321)
T 3ow8_A 308 VGDDQEIHIYDCP 320 (321)
T ss_dssp EETTCCEEEEECC
T ss_pred EeCCCeEEEEeCC
Confidence 9999999999963
No 31
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-42 Score=295.09 Aligned_cols=283 Identities=18% Similarity=0.321 Sum_probs=240.8
Q ss_pred ccccceEEEEECCCCC-EEEEEeCCCeEEEEeC----CCcc------eEEEeee----------ccCCEEEEEEccCCCe
Q 021459 20 AHSRAVSCVKFSNDGT-LLASASLDKTVIIWSA----SSLA------LVHRFVG----------HSEGISDLAWSSDSHY 78 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~-~l~t~~~d~~i~vw~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~ 78 (312)
.|.++|++++|+|+++ +|++++.|+.|++|++ .+++ ....+.. |...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4569999999999999 9999999999999999 7777 3444443 6779999999999999
Q ss_pred EEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE--------------
Q 021459 79 ICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV-------------- 144 (312)
Q Consensus 79 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-------------- 144 (312)
|++++.|+.|++||.. ...+..+.+|...|.+++|+|+++.|++++.|+.|++||+++++....
T Consensus 123 l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 123 IVTGVENGELRLWNKT--GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEETTSCEEEEETT--SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEeCCCeEEEEeCC--CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 9999999999999943 355677888999999999999999999999999999999987765432
Q ss_pred ------------------------------------------eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCc
Q 021459 145 ------------------------------------------IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGA 182 (312)
Q Consensus 145 ------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (312)
+..|..++.+++|+|+++++++++.|+.|++||+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp -----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred cccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 23466789999999999999999999999999999887
Q ss_pred eeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEE
Q 021459 183 CLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVY 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 262 (312)
....+.. +...+..+.|+|++ .+++++.|+.|++||+++++.+..+..+.....++ ...+++++|++++.||.|+
T Consensus 281 ~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~---~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 281 SQNCFYG-HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAG---RISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp CSEEECC-CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEE---EECTTSSEEEEEETTSCEE
T ss_pred cceEecC-CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEE---EEcCCCCEEEEEECCCeEE
Confidence 7766643 45678889999999 99999999999999999999888888776654433 3457899999999999999
Q ss_pred EEECCchh--------------------eeecccCCcc--ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 263 VWDLQQKT--------------------MIQKLDGHTD--SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 263 iwd~~~~~--------------------~~~~~~~h~~--~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+||+.+.. .+..+.+|.. .|.+++|+|++++|++++.| ++|++|+++
T Consensus 356 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~ 424 (425)
T 1r5m_A 356 VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL--QEGSVVAIP 424 (425)
T ss_dssp EEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS--SCCEEEECC
T ss_pred EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC--ceEEEEeec
Confidence 99999888 7888999976 99999999999999999955 589999975
No 32
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=304.88 Aligned_cols=288 Identities=14% Similarity=0.263 Sum_probs=234.3
Q ss_pred ceeee-cccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCC---cc---eEEEeeeccCCEEEEEEccCCCeEEEEcCC
Q 021459 14 HFKTL-TAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASS---LA---LVHRFVGHSEGISDLAWSSDSHYICSASDD 85 (312)
Q Consensus 14 ~~~~~-~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 85 (312)
...++ .+|.+.|++++|+| ++++|++|+.||.|++|+..+ +. .... ..|...|.+++|+|++++|++++.|
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT-YDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE-EECSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee-ccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 34566 88999999999999 999999999999999999876 32 1222 2589999999999999999999999
Q ss_pred CeEEEEeCC---CCceeeeeeec------------ccccEEEEE--EecCCCEEEEeecCCcEEEEEcCCCeEEEEeee-
Q 021459 86 RTLRIWDAR---TPFDCLKTLRG------------HSDFVFCVN--FNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRA- 147 (312)
Q Consensus 86 ~~v~~wd~~---~~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~- 147 (312)
+.|++||+. .+ +......+ +...+.++. ++++++.+++++.|+.|++||+++++.+..+..
T Consensus 133 g~i~vwd~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 133 GQIIVLKVNHYQQE-SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp SEEEEEEEEEEEET-TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEEeccccCC-ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 999999984 22 12222211 345566666 557899999999999999999999999988887
Q ss_pred -cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEEC----CCCCEEEEEecCCeEEEEEcC
Q 021459 148 -HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFS----PNGKFILVGTLDSTLKLWNYS 222 (312)
Q Consensus 148 -~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~d~~i~v~d~~ 222 (312)
|...|++++|+|+++++++|+.||.|++||+++++.+..+...+...+..++++ |++.+|++++.|+.|++||++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 889999999999999999999999999999999888877653445567777555 567899999999999999999
Q ss_pred CCcEEEEEEccCCc--------------------------eeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeeccc
Q 021459 223 AGKFLKIYTGHTNK--------------------------KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLD 276 (312)
Q Consensus 223 ~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (312)
+++.+..+.++... ..++ .+. ++++|++|+.||.|++||+.+++....+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l--~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI--SVS--NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE--EEE--TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE--EEC--CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 99988888765321 1122 232 56899999999999999999887776665
Q ss_pred C-------------------------------------CccceEEEEEcCC--CceEEEeeecCCeeEEEEe
Q 021459 277 G-------------------------------------HTDSVISVTCHPT--ENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 277 ~-------------------------------------h~~~v~~l~~~p~--~~~l~~~~~dgd~~v~iw~ 309 (312)
+ |.+.|++++|+++ +..|++++.| ++|+||.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d--G~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS--GLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT--SCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC--ceEEEeC
Confidence 5 8899999999998 7788888855 6999995
No 33
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6e-43 Score=299.41 Aligned_cols=248 Identities=33% Similarity=0.612 Sum_probs=226.5
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
..+++.+|.+.|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccC-------------
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRD------------- 160 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~------------- 160 (312)
.++ .++..+.+|...|.++.++|+++++++++.|+.|++||++++++...+..|...|.+++|+|+
T Consensus 222 ~~~-~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 300 (410)
T 1vyh_C 222 QTG-YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE 300 (410)
T ss_dssp TTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC
T ss_pred CCC-cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccc
Confidence 885 567788899999999999999999999999999999999999999999999999999999996
Q ss_pred -------CCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc
Q 021459 161 -------GSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH 233 (312)
Q Consensus 161 -------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 233 (312)
+.++++|+.|+.|++||++++..+..+.. +...+..+.|+|++++|++++.|+.|++||+.+++.+..+.+|
T Consensus 301 ~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp -------CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECC
T ss_pred ccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 67899999999999999999988877754 4566888899999999999999999999999999988888888
Q ss_pred CCceeEEEEEEEccCCcEEEEeecCCeEEEEEC
Q 021459 234 TNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 266 (312)
.....++ ...+++.+|++|+.||.|++|++
T Consensus 380 ~~~v~~l---~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 380 EHFVTSL---DFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEE---EECSSSSCEEEEETTSEEEEEC-
T ss_pred CCcEEEE---EEcCCCCEEEEEeCCCcEEEEeC
Confidence 8765443 34578899999999999999986
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.9e-42 Score=317.73 Aligned_cols=292 Identities=22% Similarity=0.383 Sum_probs=258.9
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
...+++.+|.+.|++++|+|++++|++++.||.|++|+..+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-eEEEEeeecCcCeEEEEEcc-CCCEEEEeeCC
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-KCTRVIRAHSMPVTSVHFNR-DGSLIVSGSHD 170 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 170 (312)
+.++ +.+..+.+|.+.|.+++|+|+++.+++++.||.|++||+.++ .....+..|..++.+++|+| ++..+++++.|
T Consensus 84 ~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 84 YNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp TTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCC-cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 9875 556778889999999999999999999999999999999987 66677888999999999999 88999999999
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECC--CCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccC
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSP--NGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTN 248 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
|.|++||+.++.....+.......+..+.|+| ++.+|++++.|+.|++||+.+++.+..+.+|.....++ ...++
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~---~~~~~ 239 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA---VFHPT 239 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEE---EECSS
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEE---EEcCC
Confidence 99999999888777666655556677888999 99999999999999999999999888888887664433 34578
Q ss_pred CcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceE-EEeeecCCeeEEEEee
Q 021459 249 GKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKI-ASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 249 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l-~~~~~dgd~~v~iw~~ 310 (312)
+.+|++++.||.|++||+.+++....+..|...+.+++|+|++..+ ++++.| ..+.+|+.
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 300 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD--NGFTVLSL 300 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEET--TEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeC--CCEEEEEc
Confidence 8999999999999999999999999999999999999999998743 444533 35777764
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.1e-42 Score=296.84 Aligned_cols=283 Identities=15% Similarity=0.212 Sum_probs=236.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
..+....|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+. +.+..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~ 176 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-SNPRT 176 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CCCEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-cCceE
Confidence 44455578999999999999999999999998888877899999999999999999999999999999999875 45677
Q ss_pred eecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec---CcCeE---------------------EEEEc
Q 021459 103 LRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH---SMPVT---------------------SVHFN 158 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~---~~~v~---------------------~~~~~ 158 (312)
+.+|...|.+++|+|+++.|++++.|+.|++||+++++....+..+ ...+. +++|+
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 8899999999999999999999999999999999999988877643 33344 44557
Q ss_pred cCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCC-EEEEEecCCeEEEEEcCCCcE-EEEEEccCCc
Q 021459 159 RDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGK-FILVGTLDSTLKLWNYSAGKF-LKIYTGHTNK 236 (312)
Q Consensus 159 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~ 236 (312)
|+++++++++.||.|++||+++++....+...+...+..++|+|++. +|++++.||.|++||+++++. +..+..+...
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~ 336 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT 336 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC
Confidence 89999999999999999999998887777666677899999999999 999999999999999998754 5666654332
Q ss_pred eeEEEEEEEccCCcEEEEeecCCeEEEEECCchh---------eeecccCCccceEEEEEcCCCc---eEEEeeecCCee
Q 021459 237 KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKT---------MIQKLDGHTDSVISVTCHPTEN---KIASAGLDGDRT 304 (312)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~~p~~~---~l~~~~~dgd~~ 304 (312)
. +...+. +++.+|++++.||.|++||+.... ....+.+|...|.+++|+|+++ .++++|.+ +.
T Consensus 337 ~--v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~--g~ 411 (420)
T 3vl1_A 337 P--INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN--NF 411 (420)
T ss_dssp C--EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT--TE
T ss_pred C--ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC--ce
Confidence 2 222333 467899999999999999987632 2234557888999999999998 67777744 58
Q ss_pred EEEEeec
Q 021459 305 VRVWVQD 311 (312)
Q Consensus 305 v~iw~~~ 311 (312)
+++|+++
T Consensus 412 ~~~~~~~ 418 (420)
T 3vl1_A 412 CALYNLS 418 (420)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 9999875
No 36
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-43 Score=303.46 Aligned_cols=287 Identities=15% Similarity=0.230 Sum_probs=242.8
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCC----cceEEEeeeccCCEEEEEEccC-CCeEEEEcCCCeEEEEeCC
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASS----LALVHRFVGHSEGISDLAWSSD-SHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~wd~~ 94 (312)
.|...|++++|+|++++|++++.||.|++|++.. .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999999999999999999999987 4577888899999999999998 8999999999999999998
Q ss_pred CCc------ee--eeeeecccccEEEEEEecC-CCEEEEeecCCcEEEEEcCCCeEEEEeeec------CcCeEEEEEcc
Q 021459 95 TPF------DC--LKTLRGHSDFVFCVNFNPQ-SNLIVSGSFDESIRIWEVKTGKCTRVIRAH------SMPVTSVHFNR 159 (312)
Q Consensus 95 ~~~------~~--~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~------~~~v~~~~~~~ 159 (312)
+.. .. .....+|...+.+++|+|+ ++.+++++.||.|++||+++++....+..+ ...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 754 21 2234578899999999999 789999999999999999999988888766 78899999999
Q ss_pred CC-CEEEEeeCCC---eEEEEeCCCCc-eeeEcccCCCCcEEEEEECC-CCCEEEEEecCCeEEEEEcCCCcEEEEEEcc
Q 021459 160 DG-SLIVSGSHDG---TCKIWDAGEGA-CLKTLIDDKDPAVSFAKFSP-NGKFILVGTLDSTLKLWNYSAGKFLKIYTGH 233 (312)
Q Consensus 160 ~~-~~l~~~~~d~---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 233 (312)
++ .++++++.|+ .|++||++++. ....+...+...+..++|+| ++++|++++.|+.|++||+++++.+..+..|
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~ 304 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR 304 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC
Confidence 97 6899999998 99999999864 34433314566788899999 9999999999999999999999999999888
Q ss_pred CCceeEEEEEEEccCC-cEEEEeecCCeEEEEECCchheeeccc-----------------------------------C
Q 021459 234 TNKKYCITSTFSVTNG-KYIVSGSEDNCVYVWDLQQKTMIQKLD-----------------------------------G 277 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-----------------------------------~ 277 (312)
......+ .+ .+++ .+|++++.||.|++||+.+........ .
T Consensus 305 ~~~v~~~--~~-s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (416)
T 2pm9_A 305 GNWCFKT--KF-APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTW 381 (416)
T ss_dssp SSCCCCE--EE-CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCST
T ss_pred CCceEEE--EE-CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcc
Confidence 7765444 23 3566 899999999999999997654332221 1
Q ss_pred CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 278 HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 278 h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|..++.+++|+|++++|++++. |++|+||++.
T Consensus 382 ~~~~~~~~~~s~dg~~la~~~~--d~~v~~w~~~ 413 (416)
T 2pm9_A 382 YGEPSPAAHWAFGGKLVQITPD--GKGVSITNPK 413 (416)
T ss_dssp TCCCSCCCEEETTTEEECBCTT--SSCBCCBCCC
T ss_pred ccCCccceEEeeCCeEEEEeCC--CCeEEEEEec
Confidence 6678889999999999999984 5689999874
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-44 Score=302.81 Aligned_cols=285 Identities=14% Similarity=0.179 Sum_probs=225.3
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc--ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 18 LTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL--ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
+..|.++|++++|+|++++|++++.|+.|++|+..++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4457889999999999999999999999999999987 67778889999999999999999999999999999999987
Q ss_pred Cc--eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE---EEEeee-cCcCeEEEEEccCCCEEEEeeC
Q 021459 96 PF--DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC---TRVIRA-HSMPVTSVHFNRDGSLIVSGSH 169 (312)
Q Consensus 96 ~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
.. .....+.+|...|.+++|+|+++.|++++.|+.|++||+++++. ...+.. |...|.+++|+|+++++++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 53 23556678999999999999999999999999999999998763 566666 8999999999999999999999
Q ss_pred CCeEEEEeCCC------------------CceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE----E
Q 021459 170 DGTCKIWDAGE------------------GACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF----L 227 (312)
Q Consensus 170 d~~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~ 227 (312)
|+.|++||+.. ++....+ .+...+..++|+|++++|++++.|+.|++||+.+++. +
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999852 3333333 4566788999999999999999999999999998876 6
Q ss_pred EEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchh--ee---------------------------------
Q 021459 228 KIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKT--MI--------------------------------- 272 (312)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~--------------------------------- 272 (312)
..+..|.....++ ...+++++|++|+.++.+ +|+..... ..
T Consensus 245 ~~~~~~~~~v~~~---~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (377)
T 3dwl_C 245 ITVKLSQLPLRSL---LWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTAL 320 (377)
T ss_dssp CCEECSSSCEEEE---EEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------
T ss_pred EeecCCCCceEEE---EEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccc
Confidence 6677777664444 334678999999877766 66554211 00
Q ss_pred -e----------------cccCCccceEEEEEcCCCc----eEEEeeecCCeeEEEEee
Q 021459 273 -Q----------------KLDGHTDSVISVTCHPTEN----KIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 273 -~----------------~~~~h~~~v~~l~~~p~~~----~l~~~~~dgd~~v~iw~~ 310 (312)
. ....|...|.++++.+... .|+|+|.| ++|++|++
T Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~D--g~i~iWdl 377 (377)
T 3dwl_C 321 RSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTD--GRVVLWTL 377 (377)
T ss_dssp ----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETT--SEEEEECC
T ss_pred cccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCC--CcEEEecC
Confidence 0 0123899999999776543 59999965 59999985
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-43 Score=305.23 Aligned_cols=294 Identities=20% Similarity=0.300 Sum_probs=230.2
Q ss_pred ceeceeeecccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEcc-CCCeEEEEcCCC
Q 021459 11 PYRHFKTLTAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSS-DSHYICSASDDR 86 (312)
Q Consensus 11 ~~~~~~~~~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 86 (312)
.++..+...+|...|++|+|+| ++++||+|+.||.|+|||+.+.+ ....+.+|...|++++|+| ++++|++|+.|+
T Consensus 108 ~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 108 SYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp TTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 4455567778999999999999 56799999999999999988664 3445678999999999998 688999999999
Q ss_pred eEEEEeCCCCceeeeeee---cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-
Q 021459 87 TLRIWDARTPFDCLKTLR---GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS- 162 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~- 162 (312)
+|++||+++.. ...+. .+...+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+++|+|++.
T Consensus 188 ~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 188 TTRLQDFKGNI--LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp CEEEEETTSCE--EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSS
T ss_pred EEEEeeccCCc--eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCce
Confidence 99999997642 22222 2344578899999999999999999999999875 45667888999999999999876
Q ss_pred EEEEeeCCCeEEEEeCCCCceeeEcc--cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce---
Q 021459 163 LIVSGSHDGTCKIWDAGEGACLKTLI--DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK--- 237 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--- 237 (312)
++++++.|+.|++||+++......+. ..+...+..++|+|++.+|++++.|+.|++||+.+++....+..|....
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 78899999999999998765443332 2345678889999999999999999999999999888766665443211
Q ss_pred -eEEEEEEEccCCcEEEEe------------ecCCeEEEEECCchheeecc-cCCccceEEE-EEcCCCceEEEeeecCC
Q 021459 238 -YCITSTFSVTNGKYIVSG------------SEDNCVYVWDLQQKTMIQKL-DGHTDSVISV-TCHPTENKIASAGLDGD 302 (312)
Q Consensus 238 -~~~~~~~~~~~~~~l~~~------------~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l-~~~p~~~~l~~~~~dgd 302 (312)
..+...+ .+++..++++ ..++.|++||..+++.+..+ .+|...|.++ +|+|++.+|++++ |
T Consensus 345 ~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d-- 420 (435)
T 4e54_B 345 LTPIKAAW-HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-G-- 420 (435)
T ss_dssp SCCCBCEE-CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-S--
T ss_pred ceeEEEEE-cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-C--
Confidence 1111112 2333334333 34568999999998887765 4688888888 6999999998865 3
Q ss_pred eeEEEEeec
Q 021459 303 RTVRVWVQD 311 (312)
Q Consensus 303 ~~v~iw~~~ 311 (312)
.+|+||++.
T Consensus 421 ~~i~iW~~~ 429 (435)
T 4e54_B 421 YHILIWSQQ 429 (435)
T ss_dssp SEEEECCCC
T ss_pred CcEEEEECC
Confidence 489999874
No 39
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9e-42 Score=291.34 Aligned_cols=295 Identities=19% Similarity=0.363 Sum_probs=240.6
Q ss_pred eceeeecccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcceEEEee-------------eccCCEEEEEEcc-CCC
Q 021459 13 RHFKTLTAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLALVHRFV-------------GHSEGISDLAWSS-DSH 77 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~ 77 (312)
+....+.+|.+.|++++|+| ++++|++|+.||.|++|++.++.....+. +|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34456778999999999999 99999999999999999998765443332 4899999999999 778
Q ss_pred eEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecC---CCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEE
Q 021459 78 YICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQ---SNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTS 154 (312)
Q Consensus 78 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 154 (312)
+|++++.|+.|++||+.+. +....+. +...+.++.+.|. +..+++++.++.|++||+++++....+..|..+|.+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTL-QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp CEEEEETTSEEEEEETTTT-EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred EEEEEeCCCeEEEeeCCCC-ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 9999999999999999875 4444443 6678899999884 459999999999999999999988899999999999
Q ss_pred EEEccCCC-EEEEeeCCCeEEEEeCCCCce-eeEcc--------------cCCCCcEEEEEECCCCCEEEEEecCCeEEE
Q 021459 155 VHFNRDGS-LIVSGSHDGTCKIWDAGEGAC-LKTLI--------------DDKDPAVSFAKFSPNGKFILVGTLDSTLKL 218 (312)
Q Consensus 155 ~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v 218 (312)
++|+|+++ ++++++.||.|++||++++.. ...+. ..+...+..++|+|++++|++++.|+.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 99999998 588999999999999987652 22210 234566888999999999999999999999
Q ss_pred EEcCCCcEEEEEEccCCc--eeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEE
Q 021459 219 WNYSAGKFLKIYTGHTNK--KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIAS 296 (312)
Q Consensus 219 ~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~ 296 (312)
||+.+++.......+... ............+..+++++.+|.|++||+.+++.+..+.+|...|.+++|+|++++|++
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE
Confidence 999987754433221110 011111222334566777889999999999999999999999999999999999999999
Q ss_pred eeecCCeeEEEEeec
Q 021459 297 AGLDGDRTVRVWVQD 311 (312)
Q Consensus 297 ~~~dgd~~v~iw~~~ 311 (312)
++.| +.|++|+++
T Consensus 352 ~~~d--g~i~iw~~~ 364 (408)
T 4a11_B 352 GSRD--CNILAWVPS 364 (408)
T ss_dssp EETT--SCEEEEEEC
T ss_pred ECCC--CeEEEEeCC
Confidence 9955 589999974
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.3e-41 Score=281.03 Aligned_cols=247 Identities=25% Similarity=0.492 Sum_probs=219.6
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc----ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEE
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL----ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLR 89 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 89 (312)
....+..|...|.+++|+|++++|++|+.|+.+++|++.+. .....+.+|...|.++.|++++. +++++.|+.|+
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~ 167 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEE
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEE
Confidence 34566789999999999999999999999999999998764 34566789999999999998875 88899999999
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeC
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSH 169 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
+||+.++ +.+..+.+|.+.|.+++|+|+++++++++.|+.|++||++++++...+..|...|.+++|+|++++|++|+.
T Consensus 168 ~wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 168 LWDIETG-QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCC-cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 9999875 567788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCceeeEcccC-CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccC
Q 021459 170 DGTCKIWDAGEGACLKTLIDD-KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTN 248 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
|+.|++||+++++.+..+... ....+..++|+|++++|++|+.|+.|++||..+++.+..+.+|.....++ ...++
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~---~~s~d 323 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL---GVTDD 323 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE---EECTT
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEE---EEcCC
Confidence 999999999988766654322 22458889999999999999999999999999999999999998875554 34578
Q ss_pred CcEEEEeecCCeEEEEE
Q 021459 249 GKYIVSGSEDNCVYVWD 265 (312)
Q Consensus 249 ~~~l~~~~~dg~i~iwd 265 (312)
+.+|++|+.||.|++||
T Consensus 324 g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 324 GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSCEEEEETTSCEEEEC
T ss_pred CCEEEEEcCCccEEecC
Confidence 99999999999999996
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-43 Score=301.95 Aligned_cols=287 Identities=19% Similarity=0.347 Sum_probs=241.5
Q ss_pred cccceEEEEECCCCC-EEEEE----------eCCCeEEEEeCCCcce--EEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 21 HSRAVSCVKFSNDGT-LLASA----------SLDKTVIIWSASSLAL--VHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 21 h~~~v~~~~~s~~~~-~l~t~----------~~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
+...|.+++|+|+++ +|+++ +.|+.|++|+..++.. ......|...|.+++|+|++++|++++.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 345788999999987 99999 8999999999988752 2223358899999999999999999999999
Q ss_pred EEEEeCCC---CceeeeeeecccccEEEEEEecC-CCEEEEeecCCcEEEEEcCCCe------EEE---EeeecCcCeEE
Q 021459 88 LRIWDART---PFDCLKTLRGHSDFVFCVNFNPQ-SNLIVSGSFDESIRIWEVKTGK------CTR---VIRAHSMPVTS 154 (312)
Q Consensus 88 v~~wd~~~---~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~------~~~---~~~~~~~~v~~ 154 (312)
|++||+.. +...+..+.+|...|.+++|+|+ ++++++++.|+.|++||+++++ ... ....|...+.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999976 23467778889999999999998 8999999999999999998876 322 23568889999
Q ss_pred EEEccC-CCEEEEeeCCCeEEEEeCCCCceeeEcccCC-----CCcEEEEEECCCC-CEEEEEecCC---eEEEEEcCCC
Q 021459 155 VHFNRD-GSLIVSGSHDGTCKIWDAGEGACLKTLIDDK-----DPAVSFAKFSPNG-KFILVGTLDS---TLKLWNYSAG 224 (312)
Q Consensus 155 ~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~l~~~~~d~---~i~v~d~~~~ 224 (312)
++|+|+ +.++++++.|+.|++||+++++....+.... ...+..++|+|++ .++++++.|+ .|++||++++
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 999998 7899999999999999999988777665432 5678889999997 6899999998 9999999886
Q ss_pred -cEEEEEE-ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCC-ceEEEeeecC
Q 021459 225 -KFLKIYT-GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTE-NKIASAGLDG 301 (312)
Q Consensus 225 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~-~~l~~~~~dg 301 (312)
..+..+. +|.....++ .+.+.++.+|++++.||.|++||+.+++.+..+.+|...|.+++|+|++ ..|++++.|
T Consensus 251 ~~~~~~~~~~~~~~v~~~--~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d- 327 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSL--DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD- 327 (416)
T ss_dssp TSCSBCCCSCCSSCEEEE--EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS-
T ss_pred CCCcEEeecCccCceeEE--EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC-
Confidence 4555555 566554333 3333388999999999999999999999999999999999999999998 789998855
Q ss_pred CeeEEEEeec
Q 021459 302 DRTVRVWVQD 311 (312)
Q Consensus 302 d~~v~iw~~~ 311 (312)
++|++|++.
T Consensus 328 -~~i~iw~~~ 336 (416)
T 2pm9_A 328 -NKIEVQTLQ 336 (416)
T ss_dssp -SEEEEEESC
T ss_pred -CcEEEEEcc
Confidence 699999974
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.1e-40 Score=283.58 Aligned_cols=276 Identities=27% Similarity=0.484 Sum_probs=228.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee--eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeee
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV--GHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLK 101 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~ 101 (312)
.++.|+||++ ++||+| .|++|+|||..+++....+. +|...|++++|+|+|++|++|+.|+.|++||+.+. +.+.
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~-~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-KRLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC-cEEE
Confidence 4678999975 577766 58999999999998776554 57788999999999999999999999999999885 6678
Q ss_pred eeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-eEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCC
Q 021459 102 TLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-KCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGE 180 (312)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (312)
.+.+|...+.+++++ +..+++++.|+.+++||.... ..+..+..|...+..+.++|+++++++++.|+.+++||..+
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 888999999988775 579999999999999998764 44567788999999999999999999999999999999987
Q ss_pred Cceee---EcccCCCCcEEEEEECCCCC-EEEE--EecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEE
Q 021459 181 GACLK---TLIDDKDPAVSFAKFSPNGK-FILV--GTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVS 254 (312)
Q Consensus 181 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~l~~--~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (312)
++... .....+...+..++|+|.+. .+++ |+.|+.|++||+.+++....+..+... ....+. ++++.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v---~~~~~~-~~~~~lv~ 337 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV---CSILWS-PHYKELIS 337 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCE---EEEEEE-TTTTEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccce---eeeeec-CCCCeEEE
Confidence 65321 12234456688888999765 4544 357999999999999988887765442 233344 55666665
Q ss_pred e--ecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 255 G--SEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 255 ~--~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+ ..||.|++||+.+++++..+.+|.+.|++|+|+|++++|+++|.| ++|+||++
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D--~tvriWdv 393 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD--ETLRLWRC 393 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT--TEEEEECC
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC--CeEEEEEC
Confidence 4 379999999999999999999999999999999999999999955 69999987
No 43
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=281.30 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=203.0
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEE----EeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVH----RFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
.|...|.+++|+|++ .|++|+.||.|++||+.+++.+. ...+|...|++++|+|++++|++|+.|+.|++||+.+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 467789999999985 67899999999999998876433 3458999999999999999999999999999999988
Q ss_pred CceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCeEEEEee--ecCcCeEEEEEccC-CCEEEEeeCCC
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGKCTRVIR--AHSMPVTSVHFNRD-GSLIVSGSHDG 171 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~ 171 (312)
+ +.+..+.+|.+.|.+++|+|++. ++++++.|++|++||+++++....+. .+...+.+++|+|+ ++++++|+.|+
T Consensus 159 ~-~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 Q-VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp T-EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred C-cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 5 66788899999999999999874 78999999999999999998877664 35567899999994 56889999999
Q ss_pred eEEEEeCCCCceeeEcccCCCCcEEEEEECCCC-CEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCc
Q 021459 172 TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNG-KFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK 250 (312)
Q Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
.|++||+++++.+..+.. +...+..++|+|++ ++|++++.|++|++||.++++.+ .+.+|.....++ .+.+.+..
T Consensus 238 ~v~~wd~~~~~~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v--~~sp~~~~ 313 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA--TWSPLNHS 313 (344)
T ss_dssp EEEEEESCC--CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE--EECSSSTT
T ss_pred cEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE--EEeCCCCe
Confidence 999999999988877654 45668889999998 57899999999999999888765 456787765443 34433445
Q ss_pred EEEEeecCCeEEEEECCchhe
Q 021459 251 YIVSGSEDNCVYVWDLQQKTM 271 (312)
Q Consensus 251 ~l~~~~~dg~i~iwd~~~~~~ 271 (312)
+|++++.||.|++|++.+...
T Consensus 314 llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEEETTSCEEEEECCC---
T ss_pred EEEEEcCCCeEEEEECCCCCC
Confidence 788999999999999976543
No 44
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-41 Score=282.54 Aligned_cols=279 Identities=12% Similarity=0.138 Sum_probs=237.2
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc---eEEEeeeccCCEEEEEEccCCC-eEEEEcCCCeEEE
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA---LVHRFVGHSEGISDLAWSSDSH-YICSASDDRTLRI 90 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~ 90 (312)
++...+|.+.|++++|+|++++|++++.|+.|++|++.++. ......+|...|.+++|+|+++ +|++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 44556899999999999999999999999999999998776 3455668999999999999999 9999999999999
Q ss_pred EeC-CCCceeeeeeec--ccccEEEEEEecCCCEEEEeecCCcEEEEEcCC---------CeEEEEeeecCcCeEEEEEc
Q 021459 91 WDA-RTPFDCLKTLRG--HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT---------GKCTRVIRAHSMPVTSVHFN 158 (312)
Q Consensus 91 wd~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~v~~~~~~ 158 (312)
||+ .+.. ...+.+ |...|.+++|+| ++.+++++.|+.|++||+++ ++.+..+. |...+.+++|+
T Consensus 84 wd~~~~~~--~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 84 VDLIGSPS--FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp ECSSSSSS--EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EEeccCCc--eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 999 7653 356777 999999999999 99999999999999999987 66555555 78899999999
Q ss_pred cCCCEEEEeeCCCeEEEEeCCC-Cce-eeEcccCCCCcEEEEEECC-CCCEEEEEecCCeEEEEEcCCC------cEEEE
Q 021459 159 RDGSLIVSGSHDGTCKIWDAGE-GAC-LKTLIDDKDPAVSFAKFSP-NGKFILVGTLDSTLKLWNYSAG------KFLKI 229 (312)
Q Consensus 159 ~~~~~l~~~~~d~~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~------~~~~~ 229 (312)
|++ +++++.++.|++||+++ +.. .......+...+..+.|+| +++++++++.||.|++||++.. +....
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 887 99999999999999987 543 2223334556788899999 9999999999999999999876 66677
Q ss_pred EEccCCc------eeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCC-ccceEEEEEcCCCceEEEeeecC
Q 021459 230 YTGHTNK------KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGH-TDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 230 ~~~~~~~------~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
+..|... ...+......+++++|++++.||.|++||+.+++.+..+.+| ...|.+++ |++++|++++.||
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 7776540 112333444578999999999999999999999999999998 99999999 9999999999886
No 45
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.9e-41 Score=276.35 Aligned_cols=250 Identities=25% Similarity=0.446 Sum_probs=216.7
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
..+++.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeecccccEEEEEEecC------CCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQ------SNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
+. ..+..+.+|...+.++.+.|. +..+++++.|+.|++||+++.+....+..|..+|.+++|+|++++|+++
T Consensus 137 ~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 137 KG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp TS--CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 74 456778899999999999985 4489999999999999999999888899999999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCC-----ceeEEEE
Q 021459 168 SHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTN-----KKYCITS 242 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~~ 242 (312)
+.|+.|++||+.+++.+..+.. ...+..++|+|++.+|++++. +.+++|++..+..+..+..+.. ....+..
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 291 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVS 291 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEEC--CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEE
T ss_pred eCCCeEEEEECCCCcEEEEecC--CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeE
Confidence 9999999999999888776643 345888999999999988775 5699999988776665543211 0111233
Q ss_pred EEEccCCcEEEEeecCCeEEEEECCc
Q 021459 243 TFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 243 ~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
..+.+++++|++|+.||.|++||+.+
T Consensus 292 ~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 292 LAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEECCCCCEEEEeecCceEEEEEEee
Confidence 34458899999999999999999865
No 46
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=292.78 Aligned_cols=286 Identities=20% Similarity=0.344 Sum_probs=228.2
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc-----------eEEEeeecc------------CCEEEEEEccCC
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA-----------LVHRFVGHS------------EGISDLAWSSDS 76 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 76 (312)
.|.+.|++++|+|++++||+|+.||.|++|+..+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 368999999999999999999999999999998776 477888998 889999999998
Q ss_pred --CeEEEEcCCCeEEEEeCCCCcee--------------------------------------e-eeeecccccEEEEEE
Q 021459 77 --HYICSASDDRTLRIWDARTPFDC--------------------------------------L-KTLRGHSDFVFCVNF 115 (312)
Q Consensus 77 --~~l~~~~~d~~v~~wd~~~~~~~--------------------------------------~-~~~~~~~~~v~~~~~ 115 (312)
.+|++++.|+.|++||+.+.... . ....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998642110 0 113579999999999
Q ss_pred ecCCCEEEEeecCCcEEEEEcCC-CeEEE-------EeeecCcCeEEEEEccCC-CEEEEeeCCCeEEEEeCCCCce---
Q 021459 116 NPQSNLIVSGSFDESIRIWEVKT-GKCTR-------VIRAHSMPVTSVHFNRDG-SLIVSGSHDGTCKIWDAGEGAC--- 183 (312)
Q Consensus 116 ~~~~~~l~s~~~dg~i~~wd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~--- 183 (312)
+|++++|+++ .|+.|++||+++ ++... .+..|...|.+++|+|++ +++++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999984 44443 245788899999999998 9999999999999999998775
Q ss_pred -eeEcccCCC-----------CcEEEEEECCCCCEEEEEecCCeEEEEEcCC-CcEEEEEEccCCcee------------
Q 021459 184 -LKTLIDDKD-----------PAVSFAKFSPNGKFILVGTLDSTLKLWNYSA-GKFLKIYTGHTNKKY------------ 238 (312)
Q Consensus 184 -~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~------------ 238 (312)
...+..+.. ..+..++|+|++++|++++. +.|++||++. ++.+..+..|.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 444433332 27889999999999999998 9999999987 777777776643111
Q ss_pred EEEEEEEccCCcEEEEeecCCeEEEEECCchheeec--------------------------------ccCCccceEEEE
Q 021459 239 CITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQK--------------------------------LDGHTDSVISVT 286 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--------------------------------~~~h~~~v~~l~ 286 (312)
.+....+.+++++|++|+.||.|++||+.+++.+.. ...+...|..++
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA 423 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence 000123347899999999999999999987655421 012345789999
Q ss_pred EcCCCceEEEeeecCCeeEEEEee
Q 021459 287 CHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 287 ~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
|||+++.|++++.+ .+.+|..
T Consensus 424 ~~p~~~~la~~~~~---~~~~~~~ 444 (447)
T 3dw8_B 424 WHPKENIIAVATTN---NLYIFQD 444 (447)
T ss_dssp ECSSSSEEEEECSS---CEEEEEC
T ss_pred ECCCCCEEEEEecc---eeeeecc
Confidence 99999999999865 4888864
No 47
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=269.28 Aligned_cols=293 Identities=26% Similarity=0.449 Sum_probs=231.5
Q ss_pred CCCCceeceeeeccc--cc--ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee--eccCCEEEEEEccCCCeEE
Q 021459 7 PPYKPYRHFKTLTAH--SR--AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV--GHSEGISDLAWSSDSHYIC 80 (312)
Q Consensus 7 ~~~~~~~~~~~~~~h--~~--~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~ 80 (312)
.++-|..+++.|.+. .+ ..++|+||+++ +||+| .|++|+|||..+++.+..+. +|...|.+++|+|++++|+
T Consensus 6 ~r~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~ 83 (318)
T 4ggc_A 6 CRYIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 83 (318)
T ss_dssp CCCCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred CcccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEE
Confidence 344555566666532 22 36789999986 66665 58999999999998877664 5778899999999999999
Q ss_pred EEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-eEEEEeeecCcCeEEEEEcc
Q 021459 81 SASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-KCTRVIRAHSMPVTSVHFNR 159 (312)
Q Consensus 81 ~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~ 159 (312)
+|+.|+.|++||++++ +.+..+.+|...+.++.+ ++..+++++.++.+++|+.... .....+..|...+..+.+.+
T Consensus 84 sgs~Dg~v~iw~~~~~-~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (318)
T 4ggc_A 84 VGTSSAEVQLWDVQQQ-KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 160 (318)
T ss_dssp EEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEECCCcEEEeecCCc-eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC
Confidence 9999999999999885 667788899888876654 5679999999999999998765 44566778999999999999
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCceee---EcccCCCCcEEEEEECCCCCEE---EEEecCCeEEEEEcCCCcEEEEEEcc
Q 021459 160 DGSLIVSGSHDGTCKIWDAGEGACLK---TLIDDKDPAVSFAKFSPNGKFI---LVGTLDSTLKLWNYSAGKFLKIYTGH 233 (312)
Q Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l---~~~~~d~~i~v~d~~~~~~~~~~~~~ 233 (312)
+++++++++.|+.|++||+++++... .........+....+.|++..+ ++++.++.|++||.+...........
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~ 240 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH 240 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS
T ss_pred CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce
Confidence 99999999999999999998765322 1122344567777888876533 35677899999999888776655433
Q ss_pred CCceeEEEEEEEccCCcEEEE--eecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 234 TNKKYCITSTFSVTNGKYIVS--GSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
.. . ....+. +.+..+++ |+.||.|++||+.+++++..+.+|.+.|.+++|+|++++|+++|.| ++|+||++
T Consensus 241 ~~-v--~~~~~~-~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D--~~v~iWd~ 313 (318)
T 4ggc_A 241 SQ-V--CSILWS-PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD--ETLRLWRC 313 (318)
T ss_dssp SC-E--EEEEEE-TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT--TEEEEECC
T ss_pred ee-e--eeeeec-ccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC--CeEEEEEC
Confidence 32 2 222333 45555554 4589999999999999999999999999999999999999999955 59999987
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-42 Score=302.51 Aligned_cols=286 Identities=14% Similarity=0.121 Sum_probs=220.4
Q ss_pred cccceEEEEECCCC---------CEEEE-------------------EeCCCeEEEEeCCCcce----EEEeeeccCCEE
Q 021459 21 HSRAVSCVKFSNDG---------TLLAS-------------------ASLDKTVIIWSASSLAL----VHRFVGHSEGIS 68 (312)
Q Consensus 21 h~~~v~~~~~s~~~---------~~l~t-------------------~~~d~~i~vw~~~~~~~----~~~~~~~~~~v~ 68 (312)
+.+.|.+++|+|++ ++||+ ++.|++|+||++.+++. ...+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56778888888765 45555 55789999999877653 234567788999
Q ss_pred EEEEccC------CCeEEEEcCCCeEEEEeCCCCce----------eeeeeecccccEEEEEEecCCCEEEEeecCCcEE
Q 021459 69 DLAWSSD------SHYICSASDDRTLRIWDARTPFD----------CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIR 132 (312)
Q Consensus 69 ~~~~~~~------~~~l~~~~~d~~v~~wd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 132 (312)
+++|+|+ +.+||+++.||+|++||+..+.. ....+.+|...|.+++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999975421 12356789999999999986 5899999999999
Q ss_pred EEEcCCCe-EEEEeeecCcCeEEE--EEccCC-CEEEEeeCCCeEEEEeCCCCceeeEcccCCC-CcEEEEEECCCCCEE
Q 021459 133 IWEVKTGK-CTRVIRAHSMPVTSV--HFNRDG-SLIVSGSHDGTCKIWDAGEGACLKTLIDDKD-PAVSFAKFSPNGKFI 207 (312)
Q Consensus 133 ~wd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 207 (312)
+||+++++ ....+..|..+|.++ .|+|++ .+|++++.|++|++||+++++....+..+.. ..+..++|+|+++.+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 99998764 345678899999999 578887 8999999999999999998776554433322 235567899999999
Q ss_pred EEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCch------------------
Q 021459 208 LVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK------------------ 269 (312)
Q Consensus 208 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------------------ 269 (312)
++++.|++|++||++++..+..+.+|......+ ...+++++|++|+.||+|++||+...
T Consensus 371 ~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sv---a~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~ 447 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFAVHPLVSRETTITAI---GVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLW 447 (524)
T ss_dssp EEECSSSEEEEEETTCTTCCEEEEECSSCEEEE---ECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEE
T ss_pred EEeCCCCcEEEEECcccccceeeecCCCceEEE---EeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEE
Confidence 999999999999999988877788888775554 33578999999999999999975211
Q ss_pred --------------------------heeecccCCccceEEEEEcCCCc---eEEEeeecCCeeEEEEeecC
Q 021459 270 --------------------------TMIQKLDGHTDSVISVTCHPTEN---KIASAGLDGDRTVRVWVQDR 312 (312)
Q Consensus 270 --------------------------~~~~~~~~h~~~v~~l~~~p~~~---~l~~~~~dgd~~v~iw~~~~ 312 (312)
..+..+.+|...|.+|+|+|+++ .+++|+ .+++||||++++
T Consensus 448 ~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~--~~g~vrlw~l~~ 517 (524)
T 2j04_B 448 KWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN--SAGLLTLEYLSL 517 (524)
T ss_dssp ECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEEC--TTSEEEEEECSC
T ss_pred EeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhc--cCceEEEEEccc
Confidence 11223456888999999999964 788877 456999999875
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-40 Score=283.75 Aligned_cols=280 Identities=22% Similarity=0.411 Sum_probs=233.1
Q ss_pred ccccc--eEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeee-ccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC
Q 021459 20 AHSRA--VSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVG-HSEGISDLAWSSDSHYICSASDDRTLRIWDARTP 96 (312)
Q Consensus 20 ~h~~~--v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 96 (312)
+|.+. +.++.|++ ..+++++.|+.|++|+..+++....+.. |...|.+++|+|++++|++|+.||.|++||+.+.
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 56655 44466654 5588888999999999999988776665 7889999999999999999999999999999875
Q ss_pred ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcC-CCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEE
Q 021459 97 FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK-TGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKI 175 (312)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (312)
+.+..+.+|...|.+++|+ ++.+++++.||.|++||++ .+.....+..|...|.+++|+|+++++++++.|+.|++
T Consensus 167 -~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 167 -TKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp -CEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -eEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 5577788999999999994 5799999999999999998 56667788889999999999999999999999999999
Q ss_pred EeCCCCceeeEcccCCCCcEEEEEECCCCC-EEEEEe--cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEE
Q 021459 176 WDAGEGACLKTLIDDKDPAVSFAKFSPNGK-FILVGT--LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYI 252 (312)
Q Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
||+++++....+.. +...+..++|+|++. ++++++ .|+.|++||+.+++.+..+..+ .. +......++++++
T Consensus 244 wd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~---v~~~~~s~~~~~l 318 (401)
T 4aez_A 244 WDARSSIPKFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQ---VTSLIWSPHSKEI 318 (401)
T ss_dssp EETTCSSEEEEECC-CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SC---EEEEEECSSSSEE
T ss_pred ccCCCCCccEEecC-CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-Cc---EEEEEECCCCCeE
Confidence 99999887766543 455677889999765 555554 7999999999999988877643 22 3334445788888
Q ss_pred EE--eecCCeEEEEECCchhee--ecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 253 VS--GSEDNCVYVWDLQQKTMI--QKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 253 ~~--~~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
++ |+.||.|++||+.+.... ..+.+|...|.+++|+|++++|++++.| ++|++|++.
T Consensus 319 ~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d--g~i~iw~~~ 379 (401)
T 4aez_A 319 MSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD--ENLKFWRVY 379 (401)
T ss_dssp EEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT--SEEEEEECC
T ss_pred EEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEECC
Confidence 88 558999999999875443 4467899999999999999999999955 699999974
No 50
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.5e-41 Score=284.92 Aligned_cols=280 Identities=17% Similarity=0.187 Sum_probs=215.2
Q ss_pred ccceEEEEECCCCCEEEEEeCC-------CeEEEEeCCCcce----------EEEeeeccCCEEEEEEccCCCeEEEE--
Q 021459 22 SRAVSCVKFSNDGTLLASASLD-------KTVIIWSASSLAL----------VHRFVGHSEGISDLAWSSDSHYICSA-- 82 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d-------~~i~vw~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~-- 82 (312)
.-||++++|+||+++|++||.+ +.|++|++..... ...+.+|...|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 4589999999999999998754 3599998765321 12345677788777664 5566655
Q ss_pred ---------cCCCeEEEEeCCCCceeeee--------eecccccEEEEEEecCCCEEEE--eecCCcEEEEEcCCCeEEE
Q 021459 83 ---------SDDRTLRIWDARTPFDCLKT--------LRGHSDFVFCVNFNPQSNLIVS--GSFDESIRIWEVKTGKCTR 143 (312)
Q Consensus 83 ---------~~d~~v~~wd~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~s--~~~dg~i~~wd~~~~~~~~ 143 (312)
+.|+.+++|++......+.. ...+...+.+++|+|||+++++ ++.|++|++||+++++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 45778999987654322221 1234456889999999998764 4578999999999999887
Q ss_pred EeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceee-EcccCCCCcEEEEEECCCCCEEEEEecCC----eEEE
Q 021459 144 VIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLK-TLIDDKDPAVSFAKFSPNGKFILVGTLDS----TLKL 218 (312)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~v 218 (312)
.+. |...|.+++|+|+|+++++++.++ +.+|+..++.... .....+...+..++|+|+++++++++.|+ .+++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 775 777899999999999999998654 5666666655443 33344566788899999999999998887 6888
Q ss_pred EEcCCCcE----EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeec-ccCCccceEEEEEcCCCce
Q 021459 219 WNYSAGKF----LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQK-LDGHTDSVISVTCHPTENK 293 (312)
Q Consensus 219 ~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~p~~~~ 293 (312)
||...... ...+.+|.....+ ....|++++||+|+.||.|+|||+.+++++.. +.+|...|++|+|+|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~---~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~ 326 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITS---MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTY 326 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEE---EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCE
T ss_pred cccccceecceeeeeecCCCCCeEe---EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCE
Confidence 99876653 2345556555433 34458999999999999999999999988877 5799999999999999999
Q ss_pred EEEeeecCCeeEEEEee
Q 021459 294 IASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 294 l~~~~~dgd~~v~iw~~ 310 (312)
|+++|.| ++||||++
T Consensus 327 laS~S~D--~tvrvw~i 341 (365)
T 4h5i_A 327 VASVSAA--NTIHIIKL 341 (365)
T ss_dssp EEEEETT--SEEEEEEC
T ss_pred EEEEeCC--CeEEEEEc
Confidence 9999955 69999997
No 51
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-40 Score=276.16 Aligned_cols=251 Identities=27% Similarity=0.523 Sum_probs=197.7
Q ss_pred eeee-cc-cccceEEEEECCCCCEEEEEeCCCeEEEEeCCC-------cceEEEeeeccCCEEEEEEccCCCeEEEEcCC
Q 021459 15 FKTL-TA-HSRAVSCVKFSNDGTLLASASLDKTVIIWSASS-------LALVHRFVGHSEGISDLAWSSDSHYICSASDD 85 (312)
Q Consensus 15 ~~~~-~~-h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 85 (312)
...+ .+ |.+.|.+++|+|++++|++|+.|+.|++|+... .+.+..+.+|...|.+++|+|++++|++|+.|
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3444 34 999999999999999999999999999999843 34567788999999999999999999999999
Q ss_pred CeEEEEeCCCC---ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC--eEEEEeeecCcCeEEEEEccC
Q 021459 86 RTLRIWDARTP---FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG--KCTRVIRAHSMPVTSVHFNRD 160 (312)
Q Consensus 86 ~~v~~wd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~~~~ 160 (312)
+.|++||+... .+.+..+.+|...|.+++|+|++++|++++.|++|++||+.++ +++..+..|...|.+++|+|+
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 99999998532 2456678899999999999999999999999999999999876 567788899999999999998
Q ss_pred --CCEEEEeeCCCeEEEEeCCCC--------ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE--EE
Q 021459 161 --GSLIVSGSHDGTCKIWDAGEG--------ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF--LK 228 (312)
Q Consensus 161 --~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~ 228 (312)
+.++++++.|+.|++||++.+ .....+...+...+..++|++++ +|++++.||.|++||..+++. ..
T Consensus 209 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 209 EGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp SSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEe
Confidence 678999999999999998654 22333333356678889999765 889999999999999987743 22
Q ss_pred EE-EccCC-ceeEEEEEEEcc-CCcEEEEeecCCeEEEEECCc
Q 021459 229 IY-TGHTN-KKYCITSTFSVT-NGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 229 ~~-~~~~~-~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~ 268 (312)
.. ..|.. ...++ .+.+. ++.+|++|+.||.|++||++.
T Consensus 288 ~~~~~h~~~~v~~v--~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 288 KRALCHGVYEINVV--KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EESCTTTTSCEEEE--EEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccccccceEEEE--EEecCCCceEEEEecCCCcEEEEEecc
Confidence 22 34543 33333 23322 578999999999999999864
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-40 Score=275.74 Aligned_cols=282 Identities=17% Similarity=0.299 Sum_probs=237.5
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce--
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-- 98 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-- 98 (312)
|.++|.+++|+|+|++++++..++.+..|............+|...|.+++|+|++++|++++ |+.|++||+.+...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 677899999999999999988877777776665555555668999999999999999999998 99999999976432
Q ss_pred eeeeee--cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCe--EEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 99 CLKTLR--GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGK--CTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 99 ~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
....+. +|...+.+++|+|+++.+++++.|+.|++||+++++ ....+..|...+.+++|+|+++++++++.|+.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 222232 688999999999999999999999999999999877 5556778888999999999999999999999999
Q ss_pred EEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEE
Q 021459 175 IWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVS 254 (312)
Q Consensus 175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (312)
+||+++++....+.. +...+..+.|+|++++|++++.|+.|++||+++++.+..+. +.... ......+++++|++
T Consensus 167 ~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v---~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQI---FSLGYCPTGEWLAV 241 (337)
T ss_dssp EEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCE---EEEEECTTSSEEEE
T ss_pred EEeCCCCceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCce---EEEEECCCCCEEEE
Confidence 999999887776644 45668889999999999999999999999999998877665 33332 33344578999999
Q ss_pred eecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 255 GSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
++.+|.|++||+.+.+. ..+..|...|.+++|+|++++|++++.| +.|++|+..
T Consensus 242 ~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~ 295 (337)
T 1gxr_A 242 GMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKD--NLLNAWRTP 295 (337)
T ss_dssp EETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETT--SEEEEEETT
T ss_pred EcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCC--CcEEEEECC
Confidence 99999999999987764 4567899999999999999999999854 699999864
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-40 Score=319.70 Aligned_cols=288 Identities=26% Similarity=0.447 Sum_probs=255.0
Q ss_pred eeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
..+.+|.+.|++++|+|++++|++|+.||.|++|+..+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceeeeeeecccccEEEEEEec--CCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeE
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNP--QSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTC 173 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
+ +.+..+.+|...|.+++|+| ++..+++++.|+.|++||++++++...+..|..+|.+++|+|+++++++++.||.|
T Consensus 689 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 689 G-KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp C-CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred C-ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 5 56778889999999999999 45689999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeeEcccC------------CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE-ccCCceeEE
Q 021459 174 KIWDAGEGACLKTLIDD------------KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT-GHTNKKYCI 240 (312)
Q Consensus 174 ~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~ 240 (312)
++||++++.....+... ....+..++|+|+++.+++++ ++.+.+||..++..+..+. +|.....++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 846 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYC 846 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEE
Confidence 99999887765544211 122455678999999999887 7899999999988877665 555544333
Q ss_pred EEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 241 TSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 241 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
...+++.++++++.||.|++||+.++..+..+.+|...|.+++|+|+++.|++++.| ++|++|+.
T Consensus 847 ---~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~d--g~v~vw~~ 911 (1249)
T 3sfz_A 847 ---DFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD--QTIRVWET 911 (1249)
T ss_dssp ---EECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEEH
T ss_pred ---EEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCC--CeEEEEEc
Confidence 345789999999999999999999999999999999999999999999999999955 69999985
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-41 Score=288.82 Aligned_cols=280 Identities=19% Similarity=0.266 Sum_probs=230.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeee
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTL 103 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~ 103 (312)
.+++++|+|++++|++++.|+.+++|+..+.+....+..| ..+....|++++++|++++.|+.|++||+.+. +....+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-LQREID 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-EEEEET
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-ceeeec
Confidence 3457899999999999999999999999887665555555 34445578999999999999999999999864 556666
Q ss_pred ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce
Q 021459 104 RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC 183 (312)
Q Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (312)
.+|.+.|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 78999999999999999999999999999999999998899999999999999999999999999999999999999887
Q ss_pred eeEcccC--CCCcEEE---------------------EEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc-cCCceeE
Q 021459 184 LKTLIDD--KDPAVSF---------------------AKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG-HTNKKYC 239 (312)
Q Consensus 184 ~~~~~~~--~~~~~~~---------------------~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~ 239 (312)
...+... ....+.. +.|+|++++|++++.||.|++||+++++.+..+.. |.....+
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 7766432 1222332 34678999999999999999999999887766543 4444333
Q ss_pred EEEEEEccCCc-EEEEeecCCeEEEEECCchhe-eecccC-CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 240 ITSTFSVTNGK-YIVSGSEDNCVYVWDLQQKTM-IQKLDG-HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 240 ~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~-h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
....+++. +|++|+.||.|++||+.+.+. +..+.+ |...|.++.+ |++++|++++ .|++|++|++.
T Consensus 296 ---~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~--~d~~v~iw~~~ 364 (420)
T 3vl1_A 296 ---LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG--FDTSIKLDIIS 364 (420)
T ss_dssp ---EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET--TTEEEEEEEEC
T ss_pred ---EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec--CCccEEEEecc
Confidence 33346676 999999999999999988644 666666 5667888855 5778999988 45799999974
No 55
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=277.84 Aligned_cols=255 Identities=22% Similarity=0.430 Sum_probs=206.2
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc--ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 18 LTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL--ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
..+|...|++++|+|++++|++|+.|+.+++|+.... +.+..+.+|...|.+++|+|++++|++|+.|+.|++||+..
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 3689999999999999999999999999999998765 45677889999999999999999999999999999999876
Q ss_pred Cc--eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCe--EEEEeeecCcCeEEEEEccCCCEEEEeeCCC
Q 021459 96 PF--DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGK--CTRVIRAHSMPVTSVHFNRDGSLIVSGSHDG 171 (312)
Q Consensus 96 ~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
.. ..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++ +...+..|...|.+++|+|++++|++++.|+
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 43 3456678899999999999999999999999999999998875 3467788999999999999999999999999
Q ss_pred eEEEEeCCCC---------------ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE---------E
Q 021459 172 TCKIWDAGEG---------------ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF---------L 227 (312)
Q Consensus 172 ~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---------~ 227 (312)
.|++||.... .++..+...+...+..++|+|++..|++++.|+.|++|+...+.. .
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~ 296 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA 296 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEE
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe
Confidence 9999996322 112233333556788899999999999999999999999865421 1
Q ss_pred EEEEccCCceeEEEEEEEccCC-cEEEEeecCCeEEEEECCchheeecc
Q 021459 228 KIYTGHTNKKYCITSTFSVTNG-KYIVSGSEDNCVYVWDLQQKTMIQKL 275 (312)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (312)
....+|.....++ .+ .|++ .+|++|+.||.|++|++.+.+.....
T Consensus 297 ~~~~~h~~~V~~v--~~-~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 297 HLHQAHSQDVNCV--AW-NPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EETTSSSSCEEEE--EE-CSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred eecccccCcEeEe--EE-eCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 1123455554443 33 3554 69999999999999999877655443
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-40 Score=297.82 Aligned_cols=286 Identities=20% Similarity=0.342 Sum_probs=247.3
Q ss_pred eceeeecccccc-eEEEEECC--CCCEEEEEeCCCeEEEEeCCCc--------ceEEEeeeccCCEEEEEEccCCCeEEE
Q 021459 13 RHFKTLTAHSRA-VSCVKFSN--DGTLLASASLDKTVIIWSASSL--------ALVHRFVGHSEGISDLAWSSDSHYICS 81 (312)
Q Consensus 13 ~~~~~~~~h~~~-v~~~~~s~--~~~~l~t~~~d~~i~vw~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~ 81 (312)
.....+.+|... |++++|+| ++++|++++.||.|++|++.++ +.+..+..|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 556778899999 99999999 9999999999999999999754 667778889999999999999999999
Q ss_pred EcCC----CeEEEEeCCCCceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCeEEEEeeecCc---CeE
Q 021459 82 ASDD----RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGKCTRVIRAHSM---PVT 153 (312)
Q Consensus 82 ~~~d----~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~---~v~ 153 (312)
++.+ +.|++||.. +.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++....+..|.. .|.
T Consensus 134 ~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR 210 (615)
T ss_dssp EECCSSCSEEEEETTTC---CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEE
T ss_pred eccCCCCccEEEEEECC---CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEE
Confidence 9987 689999843 45677789999999999999997 899999999999999999999999999988 999
Q ss_pred EEEEccC-CCEEEEeeCCCeEEEEeCCCCceeeEccc---CCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEE
Q 021459 154 SVHFNRD-GSLIVSGSHDGTCKIWDAGEGACLKTLID---DKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKI 229 (312)
Q Consensus 154 ~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 229 (312)
+++|+|+ ++++++++.|+.|++||+++++.+..+.. .+...+..+.|+ ++++|++++.|+.|++||+++++.+..
T Consensus 211 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 9999999 99999999999999999999988877733 566778889999 999999999999999999999998888
Q ss_pred EEccCCc--eeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEE
Q 021459 230 YTGHTNK--KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRV 307 (312)
Q Consensus 230 ~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~i 307 (312)
+..+... .......+ +++.++++++.||.|++||+.+.+.+..+.+|...|.+++| |+ +++++.| ++|++
T Consensus 290 ~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~d--g~i~~ 361 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVA--TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYD--GRIME 361 (615)
T ss_dssp EECCTTCGGGCEEEEEE--EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETT--SCEEE
T ss_pred EcCCCCcccCceeEEEe--CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCC--CeEEE
Confidence 7765211 11222222 26889999999999999999998888889999999999999 77 7777744 47777
Q ss_pred Eee
Q 021459 308 WVQ 310 (312)
Q Consensus 308 w~~ 310 (312)
|+.
T Consensus 362 w~~ 364 (615)
T 1pgu_A 362 WSS 364 (615)
T ss_dssp TTT
T ss_pred EEc
Confidence 764
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.3e-40 Score=284.39 Aligned_cols=282 Identities=24% Similarity=0.489 Sum_probs=240.6
Q ss_pred ceeeecccccce-EEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 14 HFKTLTAHSRAV-SCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 14 ~~~~~~~h~~~v-~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
...++.+|...| +++.+ ++++|++|+.||.|++||..+++.+..+.+|...|.+++|+|++ +|++|+.||.|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 345788998885 66665 57899999999999999999999999999999999999999988 999999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEe--cCCCEEEEeecCCcEEEEEcCCCeE-----------------------EEEeee
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFN--PQSNLIVSGSFDESIRIWEVKTGKC-----------------------TRVIRA 147 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~~wd~~~~~~-----------------------~~~~~~ 147 (312)
++++ +.+..+.+|.+.|.+++|+ ++++.+++++.||.|++||+++++. ...+..
T Consensus 190 ~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 190 IKKG-CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp TTTT-EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred CCCC-cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 9875 5677888999999999998 4778999999999999999987652 345567
Q ss_pred cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEE
Q 021459 148 HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFL 227 (312)
Q Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 227 (312)
|...+.++ +++++++++++.|+.|++||+++++.+..+.. +...+..+.++|+++++++++.|+.|++||+++++.+
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 77777776 57889999999999999999999888777654 4566888999999999999999999999999999999
Q ss_pred EEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEE
Q 021459 228 KIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRV 307 (312)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~i 307 (312)
..+.+|.....++.. ++.+|++++.||.|++||+.+........ |...+..++|+|+++.+++++ | ++|++
T Consensus 346 ~~~~~h~~~v~~~~~-----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d--g~i~i 416 (464)
T 3v7d_B 346 YTLQGHTALVGLLRL-----SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E--NQFNI 416 (464)
T ss_dssp EEECCCSSCEEEEEE-----CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T--TEEEE
T ss_pred EEEeCCCCcEEEEEE-----cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C--CeEEE
Confidence 999888876554432 36899999999999999998876554443 566778889999999999887 4 58999
Q ss_pred Eeec
Q 021459 308 WVQD 311 (312)
Q Consensus 308 w~~~ 311 (312)
|++.
T Consensus 417 wd~~ 420 (464)
T 3v7d_B 417 YNLR 420 (464)
T ss_dssp EETT
T ss_pred EECC
Confidence 9974
No 58
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-40 Score=271.67 Aligned_cols=248 Identities=23% Similarity=0.420 Sum_probs=203.5
Q ss_pred EeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC-ceeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEE
Q 021459 59 RFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP-FDCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWE 135 (312)
Q Consensus 59 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd 135 (312)
.+.+|...|.+++|+|+|++|++|+.|+.|++||+... .+.+..+.+|.+.|.+++|+++ +++|++++.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 45789999999999999999999999999999998643 3456788999999999999863 88999999999999999
Q ss_pred cCCCe--EEEEeeecCcCeEEEEEccC--CCEEEEeeCCCeEEEEeCCCCcee-eEcccCCCCcEEEEEECCC-------
Q 021459 136 VKTGK--CTRVIRAHSMPVTSVHFNRD--GSLIVSGSHDGTCKIWDAGEGACL-KTLIDDKDPAVSFAKFSPN------- 203 (312)
Q Consensus 136 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~------- 203 (312)
+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++... ......+...+..+.|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 98874 45566779999999999997 889999999999999999875321 2223345567888899997
Q ss_pred ------CCEEEEEecCCeEEEEEcCCCc----EEEEEEccCCceeEEEEEEEccC---CcEEEEeecCCeEEEEECCchh
Q 021459 204 ------GKFILVGTLDSTLKLWNYSAGK----FLKIYTGHTNKKYCITSTFSVTN---GKYIVSGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 204 ------~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~ 270 (312)
+++|++|+.|+.|++||+++++ ....+.+|.....++. + .++ +.+|++++.||.|++||+....
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~--~-sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA--W-SPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE--E-CCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE--E-CCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998765 4556777877654443 3 344 4899999999999999987642
Q ss_pred ---eeecc--cCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 271 ---MIQKL--DGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 271 ---~~~~~--~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
....+ .+|...|.+++|+|++++|++++.| ++|+||+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D--~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--NKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT--SCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCC--CcEEEEEEC
Confidence 11223 5688899999999999999999954 689999864
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.4e-39 Score=281.66 Aligned_cols=282 Identities=29% Similarity=0.584 Sum_probs=243.7
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
+...++.+|...|.+++|+ ++++++|+.||.|++|+..+++.+..+.+|...|.+++|+ ++.+++|+.|+.|++||
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4456788999999999997 6799999999999999999999999999999999999995 56899999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCe
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGT 172 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
+.++ +.+..+.+|...+.++++ +++.+++++.||.|++||+++++.+..+..|...+.++.| ++.++++++.|+.
T Consensus 226 ~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~ 300 (445)
T 2ovr_B 226 IETG-QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 300 (445)
T ss_dssp SSSC-CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC
T ss_pred CCCC-cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe
Confidence 9875 556778889999999998 6789999999999999999999999999999999999998 7889999999999
Q ss_pred EEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc---cCCceeEEEEEEEccCC
Q 021459 173 CKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG---HTNKKYCITSTFSVTNG 249 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 249 (312)
|++||+++++.+..+..+ ...+..+.+ +++++++++.||.|++||+++++.+..+.. |.....++ .. ++
T Consensus 301 i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~---~~--~~ 372 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGH-QSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL---QF--NK 372 (445)
T ss_dssp EEEEETTTCCEEEEECCC-CSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE---EE--CS
T ss_pred EEEEECCCCCEEEEEcCC-cccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE---EE--CC
Confidence 999999999888776543 444554444 677999999999999999999999888876 44433333 22 47
Q ss_pred cEEEEeecCCeEEEEECCchheeecc-----cCCccceEEEEEcCCCceEEEeeecC--CeeEEEEeec
Q 021459 250 KYIVSGSEDNCVYVWDLQQKTMIQKL-----DGHTDSVISVTCHPTENKIASAGLDG--DRTVRVWVQD 311 (312)
Q Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~~p~~~~l~~~~~dg--d~~v~iw~~~ 311 (312)
++|++|+.||.|++||+.+++.+..+ .+|.+.|.+++|+|++..+++++.|| +..|++|+++
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 89999999999999999998887776 46888999999999999999999776 2459999885
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=273.91 Aligned_cols=248 Identities=25% Similarity=0.467 Sum_probs=217.5
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc------ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL------ALVHRFVGHSEGISDLAWSSDSHYICSASDDRT 87 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 87 (312)
....+..|...|.+++|+|++.+|++|+.|+.+++|++... .....+.+|...|.+++|+|++..|++++.|+.
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~ 177 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT 177 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc
Confidence 34556778899999999999999999999999999987542 344567789999999999999999999999999
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEec--CCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEE
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNP--QSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
|++||++++ +.+..+.+|...|.+++++| +++.|++++.||.|++||+++++++..+..|...|.+++|+|++.+|+
T Consensus 178 v~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 256 (354)
T 2pbi_B 178 CALWDVESG-QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFA 256 (354)
T ss_dssp EEEEETTTC-CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEEeCCCC-eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEE
Confidence 999999875 56778889999999999987 468999999999999999999999999999999999999999999999
Q ss_pred EeeCCCeEEEEeCCCCceeeEcccC-CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEE
Q 021459 166 SGSHDGTCKIWDAGEGACLKTLIDD-KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTF 244 (312)
Q Consensus 166 ~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
+++.|+.|++||++.+.....+... ....+..+.|+|++.+|++++.|+.|++||+.+++.+..+.+|.....++ .
T Consensus 257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l---~ 333 (354)
T 2pbi_B 257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL---R 333 (354)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE---E
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE---E
Confidence 9999999999999987665544322 22357788999999999999999999999999999988888888765444 3
Q ss_pred EccCCcEEEEeecCCeEEEEE
Q 021459 245 SVTNGKYIVSGSEDNCVYVWD 265 (312)
Q Consensus 245 ~~~~~~~l~~~~~dg~i~iwd 265 (312)
..+++++|++|+.||.|++|+
T Consensus 334 ~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEcCCCCEEecC
Confidence 457899999999999999995
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4e-39 Score=280.11 Aligned_cols=284 Identities=26% Similarity=0.458 Sum_probs=234.7
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEc--cCCCeEEEEcCCCeEEE
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWS--SDSHYICSASDDRTLRI 90 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~~ 90 (312)
+...++.+|.+.|.+++|+|++ +|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++.++++++.|+.|++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 4556778999999999999988 99999999999999999999999999999999999998 47789999999999999
Q ss_pred EeCCCCce----------------------eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec
Q 021459 91 WDARTPFD----------------------CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH 148 (312)
Q Consensus 91 wd~~~~~~----------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~ 148 (312)
||+.+... ....+.+|...+.++ +++++.+++++.||.|++||+++++.+..+..|
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 99876432 144567788888776 577899999999999999999999999999999
Q ss_pred CcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEE
Q 021459 149 SMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLK 228 (312)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 228 (312)
...|.+++|+|+++++++|+.|+.|++||+++++.+..+.. +...+..+.++ +++|++++.||.|++||+.++....
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC-CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence 99999999999999999999999999999999988877654 45567777776 5799999999999999999887655
Q ss_pred EEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeec-ccCCccceEEEEEcCCCceEEEeeecCCeeEEE
Q 021459 229 IYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQK-LDGHTDSVISVTCHPTENKIASAGLDGDRTVRV 307 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~i 307 (312)
... +...... ....+++.++++|+ ||.|++||+.+++.+.. +.+|...|.+++|+ ....+++++.|| .+.+
T Consensus 387 ~~~-~~~~~~~---~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g--~~~i 458 (464)
T 3v7d_B 387 SYH-HTNLSAI---TTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDG--QSFL 458 (464)
T ss_dssp EEE-CTTCCCE---EEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETT--EEEE
T ss_pred eec-CCCCccE---EEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCC--eEEE
Confidence 443 2222222 22335788999988 89999999999988875 67789999999997 333444445444 4444
Q ss_pred Eee
Q 021459 308 WVQ 310 (312)
Q Consensus 308 w~~ 310 (312)
|.+
T Consensus 459 ~~l 461 (464)
T 3v7d_B 459 EIL 461 (464)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=275.73 Aligned_cols=289 Identities=14% Similarity=0.263 Sum_probs=234.4
Q ss_pred CCCceeceeeecccccceEEEEECCC---CCEEEEEeCCCeEEEEeCCC-cceE-EEeeeccCCEEEEEEccCCCeEEEE
Q 021459 8 PYKPYRHFKTLTAHSRAVSCVKFSND---GTLLASASLDKTVIIWSASS-LALV-HRFVGHSEGISDLAWSSDSHYICSA 82 (312)
Q Consensus 8 ~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~t~~~d~~i~vw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~ 82 (312)
...|.+.++.+.+|.+.|++++|+|+ |++|++|+.||.|++|++.+ +..+ ..+.+|...|.+++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 34566777889999999999999999 69999999999999999987 4444 6788999999999999999999999
Q ss_pred cCCCeEEEEeCCCCceeeeeeecccccEEEEEE--ecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccC
Q 021459 83 SDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNF--NPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRD 160 (312)
Q Consensus 83 ~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
+.|+.|++||+.+.. .. ...+|...|.+++| +|+++++++++.||.|++||+++++.+..+..+. .+.++.+.+
T Consensus 105 ~~dg~v~iwd~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~- 180 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQ-AI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY- 180 (368)
T ss_dssp ETTSEEEEEETTTTE-EE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET-
T ss_pred cCCCcEEEEEcCCCC-ce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC-
Confidence 999999999998753 33 35679999999999 8899999999999999999999998888777654 566666654
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEc-ccCCCCcEEEEEECCCCCE----EEEEecCCeEEEEEcCCC---cEEEEEEc
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTL-IDDKDPAVSFAKFSPNGKF----ILVGTLDSTLKLWNYSAG---KFLKIYTG 232 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----l~~~~~d~~i~v~d~~~~---~~~~~~~~ 232 (312)
..+++++.++.+.+|+++........ ............+.++... +++++.|+.|++||++.. ..+..+..
T Consensus 181 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 181 -PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp -TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred -CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 47888999999999999876543322 2222333445555444433 999999999999999877 44555555
Q ss_pred cCCce---------eEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecC
Q 021459 233 HTNKK---------YCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 233 ~~~~~---------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
|.... ..+......+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|+++|.|+
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 54310 0234444557899999999999999999999999999999999999999999999999999764
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.7e-40 Score=275.94 Aligned_cols=290 Identities=17% Similarity=0.226 Sum_probs=220.2
Q ss_pred eeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc----ceEEEeeeccCCEEEEEEcc--CCCeEEEEcCCCeEE
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL----ALVHRFVGHSEGISDLAWSS--DSHYICSASDDRTLR 89 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 89 (312)
..+.+|.+.|++++|+|++++|++|+.||.|++|++.+. +....+.+|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999999999999999999999999875 45667789999999999999 699999999999999
Q ss_pred EEeCCCCc--------eeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCeEEEEee-------------
Q 021459 90 IWDARTPF--------DCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGKCTRVIR------------- 146 (312)
Q Consensus 90 ~wd~~~~~--------~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~------------- 146 (312)
+||+.... +.+..+.+|...|.+++|+|+ ++++++++.||.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99997643 446677789999999999999 9999999999999999998876443322
Q ss_pred ecCcCeEEEEEccC---CCEEEEeeCCCeEEEEeCCCCce--eeEcccCCCCcEEEEEECCCC----CEEEEEecCCeEE
Q 021459 147 AHSMPVTSVHFNRD---GSLIVSGSHDGTCKIWDAGEGAC--LKTLIDDKDPAVSFAKFSPNG----KFILVGTLDSTLK 217 (312)
Q Consensus 147 ~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~ 217 (312)
.|...+.++.|+|+ +.++++++.++.+.+|+...+.. ...+ ..+...+..++|+|++ ++|++++.||.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 46678999999997 89999999999998888777654 3333 3456678899999998 8999999999999
Q ss_pred EEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEE----EEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCce
Q 021459 218 LWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYI----VSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENK 293 (312)
Q Consensus 218 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 293 (312)
+||++.+............ ............+ ..+...+.+.+|+....+.+..+.+|...|.+++|+|++++
T Consensus 244 iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTN---SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp EEEEEECC------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCC
T ss_pred EEeCCCCcCccccCCcccc---eeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCE
Confidence 9999876543322211111 0001111111222 23344556677777677788889999999999999999999
Q ss_pred EEEeeecCCeeEEEEeec
Q 021459 294 IASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 294 l~~~~~dgd~~v~iw~~~ 311 (312)
|++++.| ++|++|++.
T Consensus 321 l~s~~~d--g~v~iw~~~ 336 (351)
T 3f3f_A 321 LSSAGDD--GKVRLWKAT 336 (351)
T ss_dssp EEEEETT--SCEEEEEEC
T ss_pred EEEecCC--CcEEEEecC
Confidence 9999955 589999975
No 64
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.2e-40 Score=269.92 Aligned_cols=248 Identities=21% Similarity=0.318 Sum_probs=204.5
Q ss_pred eeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCC--cceEEEeeeccCCEEEEEEccC--CCeEEEEcCCCeEEEE
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASS--LALVHRFVGHSEGISDLAWSSD--SHYICSASDDRTLRIW 91 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~w 91 (312)
..+.+|.+.|++++|+|+|++||+|+.|+.|++|++.. .+.+..+.+|...|.+++|+++ +++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999874 3567788999999999999864 8999999999999999
Q ss_pred eCCCCc-eeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCeE--EEEeeecCcCeEEEEEccC------
Q 021459 92 DARTPF-DCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGKC--TRVIRAHSMPVTSVHFNRD------ 160 (312)
Q Consensus 92 d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~--~~~~~~~~~~v~~~~~~~~------ 160 (312)
|++++. ..+..+.+|...|.+++|+|+ +++|++++.|+.|++||++++.. ...+..|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998653 345566789999999999997 78999999999999999987632 3566789999999999997
Q ss_pred -------CCEEEEeeCCCeEEEEeCCCCc----eeeEcccCCCCcEEEEEECCCC---CEEEEEecCCeEEEEEcCCCc-
Q 021459 161 -------GSLIVSGSHDGTCKIWDAGEGA----CLKTLIDDKDPAVSFAKFSPNG---KFILVGTLDSTLKLWNYSAGK- 225 (312)
Q Consensus 161 -------~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~- 225 (312)
+++|++|+.|+.|++||++++. ....+ ..+...+..++|+|++ .+|++++.|++|++||++.+.
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 5799999999999999998765 33333 3456678899999985 899999999999999997643
Q ss_pred --EEEEE--EccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 226 --FLKIY--TGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 226 --~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
....+ ..+... +....+.+++++|++++.||.|++|+..
T Consensus 242 ~~~~~~~~~~~~~~~---v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDV---LWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCEEEESSSSCCSSC---EEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccceeeeecccCCCc---EEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 12222 223333 3333445789999999999999999975
No 65
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.2e-40 Score=282.57 Aligned_cols=274 Identities=30% Similarity=0.552 Sum_probs=236.8
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC
Q 021459 17 TLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP 96 (312)
Q Consensus 17 ~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 96 (312)
...+|...|.++.+ ++++|++|+.||.|++||..+++....+.+|...|.+++| ++++|++|+.||.|++||+.++
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 33467788998886 7999999999999999999999999999999999999999 7889999999999999999875
Q ss_pred ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEE---EEeeecCcCeEEEEEccCCCEEEEeeCCCeE
Q 021459 97 FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCT---RVIRAHSMPVTSVHFNRDGSLIVSGSHDGTC 173 (312)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
+.+..+.+|...|.+++|++ +.+++++.||.|++||+++++.. ..+..|...|.++.+ +++++++|+.|+.|
T Consensus 204 -~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 204 -EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp -CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred -cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 56777889999999999974 59999999999999999887654 566789999999998 67899999999999
Q ss_pred EEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEE
Q 021459 174 KIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 174 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
++||+++++.+..+.. +...+..+.+ +++++++|+.||.|++||+++++.+..+.+|.....++.. ++.+|+
T Consensus 279 ~vwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~ 350 (435)
T 1p22_A 279 KVWNTSTCEFVRTLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-----DNKRIV 350 (435)
T ss_dssp EEEETTTCCEEEEEEC-CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-----CSSEEE
T ss_pred EEEECCcCcEEEEEcC-CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-----cCCEEE
Confidence 9999999988877654 3455666666 5789999999999999999999999999888876555432 688999
Q ss_pred EeecCCeEEEEECCchh---------eeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 254 SGSEDNCVYVWDLQQKT---------MIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+|+.||.|++||+.+.. .+..+.+|...|.+++| ++..|++++.| ++|++|++.
T Consensus 351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D--g~i~iwd~~ 413 (435)
T 1p22_A 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD--DTILIWDFL 413 (435)
T ss_dssp EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS--SEEEEEC--
T ss_pred EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC--CEEEEEECC
Confidence 99999999999997665 67788999999999999 77889999855 699999974
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.2e-39 Score=276.45 Aligned_cols=278 Identities=32% Similarity=0.611 Sum_probs=240.6
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
..+.+.+|.+.|.. ++++++++|++|+.||.|++|+..+++.+..+.+|...|.+++|+ ++++++|+.|+.|++||+
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~ 186 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNA 186 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEEC
Confidence 44678899987533 345578999999999999999999999999999999999999997 669999999999999999
Q ss_pred CCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeE
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTC 173 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
.++ +.+..+.+|...|.++.++ ++.+++++.||.|++||+++++....+..|..++.++.+ +++++++++.|+.|
T Consensus 187 ~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i 261 (445)
T 2ovr_B 187 ETG-ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 261 (445)
T ss_dssp TTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCE
T ss_pred CcC-cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEE
Confidence 875 5677888999999999996 568999999999999999999999999999999999998 78899999999999
Q ss_pred EEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEE
Q 021459 174 KIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 174 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
++||+++++.+..+.. +...+..+.+ ++.++++++.|+.|++||+++++.+..+.+|.....++. .++++++
T Consensus 262 ~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~-----~~~~~l~ 333 (445)
T 2ovr_B 262 KVWDPETETCLHTLQG-HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-----LKDNILV 333 (445)
T ss_dssp EEEEGGGTEEEEEECC-CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-----EETTEEE
T ss_pred EEEECCCCcEeEEecC-CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-----EeCCEEE
Confidence 9999999888777654 4455666667 788999999999999999999999988888776544432 2467999
Q ss_pred EeecCCeEEEEECCchheeecccC---CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 254 SGSEDNCVYVWDLQQKTMIQKLDG---HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+|+.||.|++||+.+++.+..+.+ |...|.+++|+ +++|++++.| ++|++|++.
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d--g~v~iwd~~ 390 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDD--GTVKLWDLK 390 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETT--SEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCC--CeEEEEECC
Confidence 999999999999998888888776 88899999996 5789999855 699999864
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-39 Score=275.71 Aligned_cols=243 Identities=30% Similarity=0.504 Sum_probs=206.3
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
..|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++ +....
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~ 202 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCSLT 202 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC-eeEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999875 33444
Q ss_pred eecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEe-------eecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 103 LRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVI-------RAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
+. +...+.+++|+| +++++++++.|+.|++||+++++.+..+ ..|...|.+++|+|+++++++++.|+.|+
T Consensus 203 ~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 203 LS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp EE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 43 556789999999 8999999999999999999998877665 46888999999999999999999999999
Q ss_pred EEeCCCCce------------eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEE
Q 021459 175 IWDAGEGAC------------LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITS 242 (312)
Q Consensus 175 iwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
+||+++... ...+. .+...+..++++|++.+|++++.|+.|++||..+++.+..+.+|.....++..
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp EEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 999876422 22222 34456778899999999999999999999999999999999999887655533
Q ss_pred EE---EccCCcEEEEeecCCeEEEEECCc
Q 021459 243 TF---SVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 243 ~~---~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
.. ..+++.+|++|+.||.|++|++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 21 113678999999999999999754
No 68
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-38 Score=262.26 Aligned_cols=250 Identities=34% Similarity=0.575 Sum_probs=217.4
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 57 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee-ecCcCeEEEEEccCCCEEEEeeCCCe
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR-AHSMPVTSVHFNRDGSLIVSGSHDGT 172 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
++. +.+..+..|...|.+++|+|+++++++++.||.|++||+++++....+. .+..++..++|+|+++++++++.|+.
T Consensus 137 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 215 (312)
T 4ery_A 137 KTG-KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 215 (312)
T ss_dssp TTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE
T ss_pred CCC-EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 875 5567788899999999999999999999999999999999988776654 45667999999999999999999999
Q ss_pred EEEEeCCCCceeeEcccCCCC--cEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCc
Q 021459 173 CKIWDAGEGACLKTLIDDKDP--AVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK 250 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
|++||+++++.+..+..+... .+......+++.+|++++.||.|++||+.+++.+..+.+|......+ ...+++.
T Consensus 216 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~---~~~p~~~ 292 (312)
T 4ery_A 216 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST---ACHPTEN 292 (312)
T ss_dssp EEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEE---EECSSSS
T ss_pred EEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEE---eecCcCC
Confidence 999999998887766544332 22233345788899999999999999999999999998887764433 3457788
Q ss_pred EEEEee--cCCeEEEEECC
Q 021459 251 YIVSGS--EDNCVYVWDLQ 267 (312)
Q Consensus 251 ~l~~~~--~dg~i~iwd~~ 267 (312)
++++++ .||.|++|+..
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 999886 69999999863
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-38 Score=286.41 Aligned_cols=290 Identities=20% Similarity=0.328 Sum_probs=233.2
Q ss_pred eeceeeeccccc---ceEEEEECCC-CCEEEEEeCCCeEEEEeCCCcceEEEe-e---eccCCEEEEEEccCCCeEEEEc
Q 021459 12 YRHFKTLTAHSR---AVSCVKFSND-GTLLASASLDKTVIIWSASSLALVHRF-V---GHSEGISDLAWSSDSHYICSAS 83 (312)
Q Consensus 12 ~~~~~~~~~h~~---~v~~~~~s~~-~~~l~t~~~d~~i~vw~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~ 83 (312)
.+...++.+|.. .|++++|+|+ +++|++++.|+.|++||+.+++.+..+ . .|...|.+++|+ ++++|++++
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc
Confidence 345567788999 9999999999 999999999999999999999998888 6 899999999999 999999999
Q ss_pred CCCeEEEEeCCCCceeeeeeecc----cccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc
Q 021459 84 DDRTLRIWDARTPFDCLKTLRGH----SDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR 159 (312)
Q Consensus 84 ~d~~v~~wd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
.|+.|++||+.+. +.+..+..+ ...+.++.|. +++.+++++.+|.|++||+.+++....+..|..+|.+++| |
T Consensus 272 ~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~ 348 (615)
T 1pgu_A 272 ADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-N 348 (615)
T ss_dssp TTSEEEEEETTTT-EEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-T
T ss_pred CCCcEEEEECCCC-cEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-c
Confidence 9999999999875 445555554 4677788885 8899999999999999999988777777666655555554 3
Q ss_pred C---------------------------------CCEEEEeeCCCeEEEE------------------------------
Q 021459 160 D---------------------------------GSLIVSGSHDGTCKIW------------------------------ 176 (312)
Q Consensus 160 ~---------------------------------~~~l~~~~~d~~i~iw------------------------------ 176 (312)
+ +..+++++.|+.+++|
T Consensus 349 ~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 428 (615)
T 1pgu_A 349 PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDD 428 (615)
T ss_dssp TTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSE
T ss_pred CcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCc
Confidence 2 4444444444444444
Q ss_pred --------------------------------------------eCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec
Q 021459 177 --------------------------------------------DAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 177 --------------------------------------------d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
|+.++.........+...+..++|+|++++|++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 508 (615)
T 1pgu_A 429 LLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV 508 (615)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCC
Confidence 443332221222334566888999999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEEc-cCCceeEEEEEEEcc----------CCcEEEEeecCCeEEEEECCch-heeecccCCcc
Q 021459 213 DSTLKLWNYSAGKFLKIYTG-HTNKKYCITSTFSVT----------NGKYIVSGSEDNCVYVWDLQQK-TMIQKLDGHTD 280 (312)
Q Consensus 213 d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~ 280 (312)
|+.|++||+.+++.+..+.+ |.....++ ...+ ++++|++++.||.|++||+.+. ..+..+.+|..
T Consensus 509 dg~i~iw~~~~~~~~~~~~~~h~~~v~~~---~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~ 585 (615)
T 1pgu_A 509 MGKILLYDLQSREVKTSRWAFRTSKINAI---SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 585 (615)
T ss_dssp TSCEEEEETTTTEEEECCSCCCSSCEEEE---EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT
T ss_pred CCeEEEeeCCCCcceeEeecCCCCceeEE---EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc
Confidence 99999999999998877766 66654443 3446 8999999999999999999987 67888999999
Q ss_pred ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 281 SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 281 ~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.|.+++|+|+++ |++++.| ++|++|+++
T Consensus 586 ~v~~l~~s~~~~-l~s~~~d--~~v~iw~~~ 613 (615)
T 1pgu_A 586 GVNNLLWETPST-LVSSGAD--ACIKRWNVV 613 (615)
T ss_dssp CEEEEEEEETTE-EEEEETT--SCEEEEEEC
T ss_pred ceEEEEEcCCCC-eEEecCC--ceEEEEeee
Confidence 999999999999 9999854 699999985
No 70
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-39 Score=269.60 Aligned_cols=249 Identities=24% Similarity=0.419 Sum_probs=204.1
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
....+.+|...|++++|+|++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcee-eeeeecccccEEEEEEecCC----------CEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC
Q 021459 94 RTPFDC-LKTLRGHSDFVFCVNFNPQS----------NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS 162 (312)
Q Consensus 94 ~~~~~~-~~~~~~~~~~v~~~~~~~~~----------~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
...... .....+|...+.+++|+|++ .++++++.|+.|++|| ...+....+..|..+|.+++|+|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 148 LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGK 226 (343)
T ss_dssp SSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred cCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCC
Confidence 742111 11123688899999999986 7899999999999999 45666778889999999999999999
Q ss_pred EEEEeeCCCeEEEEeCCCCc-eeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEE--EEE--------
Q 021459 163 LIVSGSHDGTCKIWDAGEGA-CLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLK--IYT-------- 231 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~-------- 231 (312)
+|++|+.|+.|++||+.+.. ....+. ....+..++|+|++.+++++ .|+.|++||+.+++... .+.
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred EEEEEcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 99999999999999995433 333321 23458889999999887655 58889999998765433 222
Q ss_pred ---ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCch
Q 021459 232 ---GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 232 ---~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
+|... +....+.+++++|++|+.||.|++|++.++
T Consensus 304 ~~~~~~~~---v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 304 GQKGKNPQ---CTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp TBCCSCCC---EEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhcCCCCc---eEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 22222 333445578999999999999999998654
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-40 Score=273.28 Aligned_cols=247 Identities=20% Similarity=0.305 Sum_probs=198.6
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEcc--CCCeEEEEcCCCeEEEEe
Q 021459 17 TLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSS--DSHYICSASDDRTLRIWD 92 (312)
Q Consensus 17 ~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~wd 92 (312)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.++. .+..+.+|...|.+++|++ ++++|++|+.|+.|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998764 4677889999999999986 489999999999999999
Q ss_pred CCCCc-eeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCeE---EEEeeecCcCeEEEEEccC------
Q 021459 93 ARTPF-DCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGKC---TRVIRAHSMPVTSVHFNRD------ 160 (312)
Q Consensus 93 ~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~~~~~v~~~~~~~~------ 160 (312)
++++. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+.. ...+..|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98653 345567789999999999998 78999999999999999987632 3345678889999999997
Q ss_pred -----------CCEEEEeeCCCeEEEEeCCCC---ceeeEcccCCCCcEEEEEECCCC----CEEEEEecCCeEEEEEcC
Q 021459 161 -----------GSLIVSGSHDGTCKIWDAGEG---ACLKTLIDDKDPAVSFAKFSPNG----KFILVGTLDSTLKLWNYS 222 (312)
Q Consensus 161 -----------~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~v~d~~ 222 (312)
+++|++|+.|+.|++||++.. +....+ ..+...+..++|+|++ .+|++++.|++|++||+.
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 468999999999999999754 233333 3455678889999986 789999999999999987
Q ss_pred CC---c-EEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 223 AG---K-FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 223 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
+. . ....+..|...... ..+.+++++|++++.||.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~---v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWH---VSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEE---EEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEE---EEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 62 1 12234445554333 3345789999999999999999975
No 72
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.9e-40 Score=275.77 Aligned_cols=279 Identities=18% Similarity=0.193 Sum_probs=194.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcC------CCeEEEEeCCCCc
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASD------DRTLRIWDARTPF 97 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~~wd~~~~~ 97 (312)
.-..+.+.+++.++.+. .+.....|++.... ..+|...|++++|+|||++|++++. |+.+++|+..+..
T Consensus 7 ~~sg~d~g~~~~~~~~~-g~~~~~~w~~p~~~----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~ 81 (357)
T 4g56_B 7 HSSGVDLGTENLYFQSN-GSSKGSAWGRPVTA----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA 81 (357)
T ss_dssp --------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--
T ss_pred cccCCCCCccceEEecC-CCccccccCCCCCC----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC
Confidence 34456666666555444 45677889875433 3469999999999999999999997 7789999876542
Q ss_pred e---eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEE----EeeecCcCeEEEEEccCCCEEEEeeCC
Q 021459 98 D---CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTR----VIRAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 98 ~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
. ......+|...|.+++|+|++. +++++.||+|++||+.+++... ....|...|++++|+|++++|++++.|
T Consensus 82 ~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 82 PNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp -CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 2 2233456888999999999875 5567889999999998876543 234688999999999999999999999
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCC-EEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCC
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGK-FILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNG 249 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
+.|++||+++++.+..+.. +...+..++|+|++. ++++++.|+.|++||+++++....+..+..........+.+.++
T Consensus 161 g~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred CeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 9999999999988777644 456788899999875 78899999999999999887665544332222233344555567
Q ss_pred cEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCC-ceEEEeeecCCeeEEEEeec
Q 021459 250 KYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTE-NKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~-~~l~~~~~dgd~~v~iw~~~ 311 (312)
.+|++|+.|+.|++||+++.+.+..+.+|...|.+++|+|++ ++|++++.| ++|+||+.+
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D--~~i~iwd~~ 300 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED--CTVAVLDAD 300 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT--SCEEEECTT
T ss_pred ceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC--CEEEEEECC
Confidence 899999999999999999999999999999999999999987 468888854 699999864
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-40 Score=270.87 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=196.4
Q ss_pred eeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc-eeeeeeecccccEEEEEEec--CCCEEEEeecCCcEEEEEc
Q 021459 60 FVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNP--QSNLIVSGSFDESIRIWEV 136 (312)
Q Consensus 60 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~ 136 (312)
+.+|...|++++|+|++++|++|+.|+.|++||+.++. ..+..+.+|.+.|.+++|++ ++++|++++.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46899999999999999999999999999999997653 34567889999999999975 4889999999999999999
Q ss_pred CCCe--EEEEeeecCcCeEEEEEccC--CCEEEEeeCCCeEEEEeCCCCcee--eEcccCCCCcEEEEEECCC-------
Q 021459 137 KTGK--CTRVIRAHSMPVTSVHFNRD--GSLIVSGSHDGTCKIWDAGEGACL--KTLIDDKDPAVSFAKFSPN------- 203 (312)
Q Consensus 137 ~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~------- 203 (312)
++++ ....+..|...|.+++|+|+ +.+|++|+.|+.|++||++.+... ......+...+..+.|+|+
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 8873 55667789999999999997 789999999999999999875321 2222334445666778887
Q ss_pred ----------CCEEEEEecCCeEEEEEcCCC---cEEEEEEccCCceeEEEEEEEccCC----cEEEEeecCCeEEEEEC
Q 021459 204 ----------GKFILVGTLDSTLKLWNYSAG---KFLKIYTGHTNKKYCITSTFSVTNG----KYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 204 ----------~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i~iwd~ 266 (312)
+++|++++.|+.|++||++.+ +.+..+.+|.....++ .+.+++ .+|++|+.||.|++||+
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v---~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV---AWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE---ECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE---EecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 468999999999999999755 3455566777654443 233443 78999999999999998
Q ss_pred Cchh----eeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 267 QQKT----MIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 267 ~~~~----~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.... ....+.+|...|.+++|+|++++|++++.| ++|+||+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D--~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD--NKVTLWKES 292 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS--SCEEEEEEC
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC--CeEEEEEEC
Confidence 7621 223456788999999999999999999955 689999864
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.3e-38 Score=304.24 Aligned_cols=295 Identities=23% Similarity=0.435 Sum_probs=249.3
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEcc--CCCeEEEEcCCCeEEE
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSS--DSHYICSASDDRTLRI 90 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~~ 90 (312)
+...++.+|...|++++|+|++++|++++.|+.|++||..+++.+..+.+|...|.+++|+| ++.++++++.|+.|++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 34567789999999999999999999999999999999999999999999999999999999 4568999999999999
Q ss_pred EeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee------------------------
Q 021459 91 WDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR------------------------ 146 (312)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~------------------------ 146 (312)
||+.++ .....+.+|.+.|.+++|+|+++.+++++.||.|++||+.+++....+.
T Consensus 728 wd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 728 WDLNQK-ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EETTSS-SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EECCCc-chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 999875 5677788999999999999999999999999999999998765433221
Q ss_pred -------------------------------ecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcE
Q 021459 147 -------------------------------AHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAV 195 (312)
Q Consensus 147 -------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (312)
.|...+.+++|+|+++++++++.++.|++||+.++.....+.. +...+
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-h~~~v 885 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG-HLSWV 885 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC-CSSCE
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC-Cccce
Confidence 4667789999999999999999999999999999887776654 55678
Q ss_pred EEEEECCCCCEEEEEecCCeEEEEEcCCCcE-----------------------------EEEEEccCCc-----eeEEE
Q 021459 196 SFAKFSPNGKFILVGTLDSTLKLWNYSAGKF-----------------------------LKIYTGHTNK-----KYCIT 241 (312)
Q Consensus 196 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----------------------------~~~~~~~~~~-----~~~~~ 241 (312)
..+.|+|++++|++++.|+.|++||+.+... +......... ...+.
T Consensus 886 ~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 8899999999999999999999999753110 0011111100 01133
Q ss_pred EEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 242 STFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.....++++++++|+.+|.|.+||+.++.....+.+|...|.+++|+|++++|++++.| ++|++|++.
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d--g~i~vwd~~ 1033 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED--SVIQVWNWQ 1033 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS--SBEEEEETT
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC--CEEEEEECC
Confidence 34456789999999999999999999998888999999999999999999999999955 589999863
No 75
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-39 Score=276.19 Aligned_cols=254 Identities=24% Similarity=0.467 Sum_probs=213.9
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc-------ceEEEeeeccCCEEEEEEccC-CCeEEEEcC
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL-------ALVHRFVGHSEGISDLAWSSD-SHYICSASD 84 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 84 (312)
+...++..|...|.+++|+|++++|++|+.|+.+++|++... .....+.+|...|.++.|.|+ +..|++|+.
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 345677889999999999999999999999999999998643 233456789999999999997 457999999
Q ss_pred CCeEEEEeCCCCceeeeee-----ecccccEEEEEEec-CCCEEEEeecCCcEEEEEcC-CCeEEEEeeecCcCeEEEEE
Q 021459 85 DRTLRIWDARTPFDCLKTL-----RGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVK-TGKCTRVIRAHSMPVTSVHF 157 (312)
Q Consensus 85 d~~v~~wd~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~ 157 (312)
|+.|++||+.++. .+..+ .+|...|.+++|++ +++++++|+.|++|++||++ .++....+.+|...|.+++|
T Consensus 179 D~~i~~wd~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~ 257 (380)
T 3iz6_a 179 DQTCVLWDVTTGQ-RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKF 257 (380)
T ss_dssp TSCEEEECTTTCC-EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEE
T ss_pred CCcEEEEEcCCCc-EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEE
Confidence 9999999998763 34333 57889999999987 78999999999999999998 45677788899999999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCC------CCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE-
Q 021459 158 NRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDK------DPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY- 230 (312)
Q Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~- 230 (312)
+|++++|++|+.|+.|++||++++..+..+.... .+.+..++|+|+|++|++|+.||.|++||...++.+..+
T Consensus 258 ~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~ 337 (380)
T 3iz6_a 258 FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG 337 (380)
T ss_dssp CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe
Confidence 9999999999999999999999988766553321 123677899999999999999999999999988877766
Q ss_pred ---EccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchh
Q 021459 231 ---TGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 231 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 270 (312)
.+|.....++ ...+++.+|++|+.||.|++|++...+
T Consensus 338 ~~~~~h~~~v~~l---~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 338 TLQNSHEGRISCL---GLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CSCSSCCCCCCEE---EECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred cccCCCCCceEEE---EECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 4566554444 345789999999999999999987643
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-39 Score=277.40 Aligned_cols=281 Identities=19% Similarity=0.333 Sum_probs=226.8
Q ss_pred ceEEEEECCCCCE-EEEEeCCCeEEEEeCCCcc----eEEEeeeccCCEEEEEEcc-CCCeEEEEcCCCeEEEEeCCCCc
Q 021459 24 AVSCVKFSNDGTL-LASASLDKTVIIWSASSLA----LVHRFVGHSEGISDLAWSS-DSHYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 24 ~v~~~~~s~~~~~-l~t~~~d~~i~vw~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~ 97 (312)
....++++|+... +++++.||.|+||++.... .+..+.+|...|.+++|+| ++++|++|+.|+.|++||+.+..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 4456888887764 4457889999999986542 3445678999999999999 89999999999999999997752
Q ss_pred ------eeeeeeecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCCCeEEEEe--eecCcCeEEEEEccCCCEEEEee
Q 021459 98 ------DCLKTLRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKTGKCTRVI--RAHSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 98 ------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
+.+..+.+|...|.+++|+|++ +++++++.||.|++||+++++....+ ..|...|.+++|+|++++|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 3466788999999999999998 69999999999999999999998888 78999999999999999999999
Q ss_pred CCCeEEEEeCCCCceeeEc-ccCCCCcEEEEEECCCCCEEEEE---ecCCeEEEEEcCCCcE-EEEEE-ccCCceeEEEE
Q 021459 169 HDGTCKIWDAGEGACLKTL-IDDKDPAVSFAKFSPNGKFILVG---TLDSTLKLWNYSAGKF-LKIYT-GHTNKKYCITS 242 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~---~~d~~i~v~d~~~~~~-~~~~~-~~~~~~~~~~~ 242 (312)
.|+.|++||+++++.+..+ ..+....+..+.|+|++.+|++| +.|+.|++||+++++. +.... .+......
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~--- 272 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL--- 272 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE---
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE---
Confidence 9999999999999888776 34444446778899999999999 7899999999987654 33332 23333222
Q ss_pred EEEccCCcEEE-EeecCCeEEEEECCchhe-eecccC--CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 243 TFSVTNGKYIV-SGSEDNCVYVWDLQQKTM-IQKLDG--HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 243 ~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
....+++++|+ +|+.||.|++||+.+++. +..+.. |...|.+++|+|++..+++ ++..+++|++.
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s----~~~~~~~~~l~ 341 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN----KCEIARFYKLH 341 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG----GTEEEEEEEEE
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee----cceeEEEEEcC
Confidence 23346777775 566899999999988763 444443 5589999999999988765 34589999874
No 77
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-38 Score=273.85 Aligned_cols=285 Identities=15% Similarity=0.220 Sum_probs=229.3
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc---eEEEeee------------------------------------
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA---LVHRFVG------------------------------------ 62 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~---~~~~~~~------------------------------------ 62 (312)
..++.+++|+|+|++|+++ .++.|++|++.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999977666 56799999998887 5555442
Q ss_pred ------------------ccCCEEEEEEccCCCeE-EEEcCCCeEEEEeCC--CCceeeeeee--cccccEEEEEEecCC
Q 021459 63 ------------------HSEGISDLAWSSDSHYI-CSASDDRTLRIWDAR--TPFDCLKTLR--GHSDFVFCVNFNPQS 119 (312)
Q Consensus 63 ------------------~~~~v~~~~~~~~~~~l-~~~~~d~~v~~wd~~--~~~~~~~~~~--~~~~~v~~~~~~~~~ 119 (312)
|...|.+++|+|++++| ++++.|+.|++||+. ++ ..+..+. .|...+.+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-NVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-SCEEEEEEEECSSCEEEEEECTTS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-ceeeeeecccCCCCceEEEEcCCC
Confidence 23369999999999986 899999999999998 53 4455554 567889999999999
Q ss_pred CEEEEeecCCcEEEEEcCCCeEEE----EeeecCcCeEEEEEccC---CCEEEEeeCCCeEEEEeCCCCceeeEcccCCC
Q 021459 120 NLIVSGSFDESIRIWEVKTGKCTR----VIRAHSMPVTSVHFNRD---GSLIVSGSHDGTCKIWDAGEGACLKTLIDDKD 192 (312)
Q Consensus 120 ~~l~s~~~dg~i~~wd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (312)
++|++++.+|.|++|++.+++... .+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+...+.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 999999999999999998876543 67789999999999999 99999999999999999999888777555566
Q ss_pred CcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccC----------------------CceeEEEEEEEccCCc
Q 021459 193 PAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHT----------------------NKKYCITSTFSVTNGK 250 (312)
Q Consensus 193 ~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~ 250 (312)
..+..++|+ ++++|++++.|+.|++||+++++.+..+..+. .....+......++++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 778889999 99999999999999999999999887776321 1112233344557889
Q ss_pred EEEEee-cCCeEEEEEC--Cch---heeecccCCccceEEEEEcCCCceEEEeee-c----CCeeEEEEeec
Q 021459 251 YIVSGS-EDNCVYVWDL--QQK---TMIQKLDGHTDSVISVTCHPTENKIASAGL-D----GDRTVRVWVQD 311 (312)
Q Consensus 251 ~l~~~~-~dg~i~iwd~--~~~---~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~-d----gd~~v~iw~~~ 311 (312)
+|++++ .++.|++|++ ... ..+..+..| ..|.+++|+|++ .+++++. + ++..|.+|.++
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEE
Confidence 999988 8999999999 554 566677777 889999999954 4444432 2 25568888765
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.1e-38 Score=284.73 Aligned_cols=250 Identities=30% Similarity=0.532 Sum_probs=212.6
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
.+.+.+|...|++++|+|++++|++|+.|+.|++||+.++.....+.+|...|.+++|+|++++|++++.|+.|++||..
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCceee--eeeecccccEEEEEEecCC--CEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCC
Q 021459 95 TPFDCL--KTLRGHSDFVFCVNFNPQS--NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 95 ~~~~~~--~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
...... ....+|...|.+++|+|++ ..+++++.|++|++||+++++....+..|...|++++|+|++++|++|+.|
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 532211 1224688899999999986 589999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCc--------------
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNK-------------- 236 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-------------- 236 (312)
+.|++||+++++.+..+.. ...+..++|+|++.+|++++ ++.|++||+++++.+..+..+...
T Consensus 583 g~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 583 GVVLLWDLAEGKKLYSLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp SBCEEEETTTTEEEECCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred CeEEEEECCCCceEEEecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 9999999999887766533 45688899999998877665 667999999998887765432211
Q ss_pred --eeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 237 --KYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 237 --~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
...+....+.+++++|++|+.||.|++|++.
T Consensus 660 ~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 660 RKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 0112333445789999999999999999985
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-38 Score=294.49 Aligned_cols=205 Identities=16% Similarity=0.265 Sum_probs=176.5
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce
Q 021459 19 TAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD 98 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 98 (312)
.+|.+.|++++|+|++++||+|+.||.|++|+..+.+....+ .|...|.+++|+| +++|++++.|+.|++||+.++ +
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~-~ 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ-K 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC-S
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC-c
Confidence 489999999999999999999999999999998877665443 4788999999999 889999999999999999875 4
Q ss_pred eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEE-----------EEeeecCcCeEEEEEccC-CCEEEE
Q 021459 99 CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCT-----------RVIRAHSMPVTSVHFNRD-GSLIVS 166 (312)
Q Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~ 166 (312)
.+..+. |.+.|.+++|+|+++++++|+.||.|++||+++++.. ..+..|..+|.+++|+|+ +..+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 455554 6678999999999999999999999999999988753 123568889999999996 478999
Q ss_pred eeCCCeEEEEeCCCCceeeEcccC-----------------CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEE
Q 021459 167 GSHDGTCKIWDAGEGACLKTLIDD-----------------KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLK 228 (312)
Q Consensus 167 ~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 228 (312)
|+.|+.| +||+++++....+..+ +...+..++|+|+|++|++++.|+.|++||+++++.+.
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 9999999 9999998877665432 12558889999999999999999999999998877654
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-37 Score=263.66 Aligned_cols=251 Identities=21% Similarity=0.323 Sum_probs=209.5
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCC--CcceEEEeeeccCCEEEEEEccC--CCeEEEEcCCCeEEE
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSAS--SLALVHRFVGHSEGISDLAWSSD--SHYICSASDDRTLRI 90 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~ 90 (312)
...+.+|.+.|++++|+|++++|++|+.||.|++|++. +.+.+..+.+|...|.+++|+++ +++|++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45788999999999999999999999999999999987 56677788899999999999987 899999999999999
Q ss_pred EeCCCCc-eeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCe--EEEEeeecCcCeEEEEEcc------
Q 021459 91 WDARTPF-DCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGK--CTRVIRAHSMPVTSVHFNR------ 159 (312)
Q Consensus 91 wd~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~------ 159 (312)
||+.+.. ..+..+.+|...|.+++|+|+ ++.+++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9998753 256667789999999999999 8999999999999999998773 3445667889999999999
Q ss_pred -------CCCEEEEeeCCCeEEEEeCCCCcee---eEcccCCCCcEEEEEECCC---CCEEEEEecCCeEEEEEcCCCc-
Q 021459 160 -------DGSLIVSGSHDGTCKIWDAGEGACL---KTLIDDKDPAVSFAKFSPN---GKFILVGTLDSTLKLWNYSAGK- 225 (312)
Q Consensus 160 -------~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~- 225 (312)
++.++++++.|+.|++||++++... ......+...+..++|+|+ +.+|++++.||.|++||++.+.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 6999999999999999999876432 1222345667888999999 8999999999999999998864
Q ss_pred --EEEEEEc--cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 226 --FLKIYTG--HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 226 --~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
....... +... +....+.+++++|++++.||.|++|++..
T Consensus 244 ~~~~~~~~~~~~~~~---v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDV---LWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCEEEESSSSCCSSC---EEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred cceeeeeccccCCCc---EEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 2222222 3333 33344557899999999999999999864
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.3e-37 Score=284.63 Aligned_cols=290 Identities=27% Similarity=0.435 Sum_probs=243.0
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
.....+.+|..+|++++|+|++++|++++.||.|++|+..+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 44567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEeeecC-cCeEEEEEcc--CCCEEEEee
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVIRAHS-MPVTSVHFNR--DGSLIVSGS 168 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~ 168 (312)
+.+.......+.+|...+.+++|+| +++.+++++.||.|++||+.+++....+..+. ..+.+++|+| ++.++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9876566778889999999999999 88899999999999999998887776666554 7899999999 999999999
Q ss_pred CCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccC
Q 021459 169 HDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTN 248 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
.||.|++||+.+++....+.. +...+..+.|+|+++++++++.||.|++||..+++.+..+..+.....++ .+ .++
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~--~~-~~~ 281 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCI--AT-HPT 281 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEE--EE-CTT
T ss_pred CCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEE--EE-ccC
Confidence 999999999999887776644 45668889999999999999999999999999999888888776654443 23 355
Q ss_pred Cc--EEEEeecCCeEEEEECCchheee-------------------------------------------cccCCccceE
Q 021459 249 GK--YIVSGSEDNCVYVWDLQQKTMIQ-------------------------------------------KLDGHTDSVI 283 (312)
Q Consensus 249 ~~--~l~~~~~dg~i~iwd~~~~~~~~-------------------------------------------~~~~h~~~v~ 283 (312)
+. +++++ .++.+.+|++....... .+..+...+.
T Consensus 282 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (814)
T 3mkq_A 282 GRKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360 (814)
T ss_dssp CGGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCS
T ss_pred CCceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCc
Confidence 54 35554 56668888865322111 1123445678
Q ss_pred EEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 284 SVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 284 ~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+++|+|+++++++++ | +.+++|+.
T Consensus 361 ~~~~spdg~~la~~~-~--~~~~i~~~ 384 (814)
T 3mkq_A 361 SLAHSPNGRFVTVVG-D--GEYVIYTA 384 (814)
T ss_dssp EEEECTTSSEEEEEE-T--TEEEEEET
T ss_pred eeEECCCCCEEEEec-C--CEEEEEEC
Confidence 999999999998887 3 57888875
No 82
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-37 Score=286.15 Aligned_cols=287 Identities=11% Similarity=0.172 Sum_probs=215.5
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCcee
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDC 99 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~ 99 (312)
.|..+|.+++|+| +++|++++.|+.|++||+.+++.+..+. |...|++++|+|++++|++|+.||.|++||+.+....
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 4788999999999 8899999999999999999998887775 7789999999999999999999999999999875321
Q ss_pred e----------eeeecccccEEEEEEecC-CCEEEEeecCCcEEEEEcCCCeEEEEeeec------------------Cc
Q 021459 100 L----------KTLRGHSDFVFCVNFNPQ-SNLIVSGSFDESIRIWEVKTGKCTRVIRAH------------------SM 150 (312)
Q Consensus 100 ~----------~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~------------------~~ 150 (312)
. ..+.+|.+.|.+++|+|+ +..+++++.||.| +||+++++....+..| ..
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 1 234678899999999996 4789999999999 9999999988877655 46
Q ss_pred CeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeE--cc---cC------------CCCcEEEEEEC----CCC-CEEE
Q 021459 151 PVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKT--LI---DD------------KDPAVSFAKFS----PNG-KFIL 208 (312)
Q Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~---~~------------~~~~~~~~~~~----~~~-~~l~ 208 (312)
.|.+++|+|+|++|++++.|+.|++||+++++.+.. +. .+ +...+..++|+ |++ .+|+
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 799999999999999999999999999998876542 21 01 12346667774 443 3455
Q ss_pred EEecC-----CeEEEEEc--------------------------------------------------------------
Q 021459 209 VGTLD-----STLKLWNY-------------------------------------------------------------- 221 (312)
Q Consensus 209 ~~~~d-----~~i~v~d~-------------------------------------------------------------- 221 (312)
+|+.+ ..+++|++
T Consensus 293 sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~ 372 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILG 372 (902)
T ss_dssp EEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEET
T ss_pred eCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcC
Confidence 55444 25666663
Q ss_pred ---------CCCcEEEE-------EEccCCceeEEEEE-------------------------------EEccCCcEEEE
Q 021459 222 ---------SAGKFLKI-------YTGHTNKKYCITST-------------------------------FSVTNGKYIVS 254 (312)
Q Consensus 222 ---------~~~~~~~~-------~~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~ 254 (312)
.++..... +..|.....++... ...+++++|++
T Consensus 373 dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laS 452 (902)
T 2oaj_A 373 NGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFIT 452 (902)
T ss_dssp TSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEE
T ss_pred CCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEE
Confidence 11110000 00000111111110 01246789999
Q ss_pred eecCCeEEEEECCchheee--c----c-----cCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 255 GSEDNCVYVWDLQQKTMIQ--K----L-----DGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 255 ~~~dg~i~iwd~~~~~~~~--~----~-----~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|+.||+|++||+..+.... . + .+|...|.+|+|+|++++||+|+.| ++|+||+++
T Consensus 453 gs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D--gtV~lwd~~ 518 (902)
T 2oaj_A 453 GHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET--GDVVLFKYE 518 (902)
T ss_dssp EETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT--SCEEEEEEE
T ss_pred ecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC--cEEEEEEec
Confidence 9999999999998764211 1 1 1788999999999999999999955 599999974
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-37 Score=259.24 Aligned_cols=252 Identities=23% Similarity=0.415 Sum_probs=207.8
Q ss_pred ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC-ceeeeeeecccccEEEEEEecC--CCEEEEeecCCcE
Q 021459 55 ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP-FDCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESI 131 (312)
Q Consensus 55 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i 131 (312)
+++..+.+|...|.+++|+|++++|++++.|+.|++||+... ...+..+.+|.+.|.+++|+++ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 445667899999999999999999999999999999998632 3456678889999999999977 8999999999999
Q ss_pred EEEEcCCCe--EEEEeeecCcCeEEEEEccC--CCEEEEeeCCCeEEEEeCCCCceee-EcccCCCCcEEEEEECC----
Q 021459 132 RIWEVKTGK--CTRVIRAHSMPVTSVHFNRD--GSLIVSGSHDGTCKIWDAGEGACLK-TLIDDKDPAVSFAKFSP---- 202 (312)
Q Consensus 132 ~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~---- 202 (312)
++||+.+++ ....+..|...|.+++|+|+ +.++++++.|+.|++||++++.... .....+...+..+.|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999987 66677789999999999999 9999999999999999998874322 22334566788899999
Q ss_pred ---------CCCEEEEEecCCeEEEEEcCCCc----EEEEEEccCCceeEEEEEEEccC---CcEEEEeecCCeEEEEEC
Q 021459 203 ---------NGKFILVGTLDSTLKLWNYSAGK----FLKIYTGHTNKKYCITSTFSVTN---GKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 203 ---------~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~ 266 (312)
++.+|++++.|+.|++||++.+. ....+.+|.....++ ...++ +.+|++++.||.|++||+
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~---~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV---AWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE---EECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE---EECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 69999999999999999998765 334555666654433 34466 899999999999999999
Q ss_pred Cchh-----eeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 267 QQKT-----MIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 267 ~~~~-----~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.... .......|...|.+++|+|++++|++++.| +.|++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--g~i~iw~~~ 286 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--NKVTLWKEN 286 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS--SSEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC--CcEEEEeCC
Confidence 8753 233344588899999999999999999965 689999974
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-36 Score=259.11 Aligned_cols=248 Identities=23% Similarity=0.402 Sum_probs=212.4
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceee
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~ 100 (312)
|...|++++|+|++++|++|+.||.|++|+..+++.+..+.+|...|.+++| ++++|++++.|+.|++||++......
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 8999999999999999999999999999999999999999999999999999 46799999999999999998666677
Q ss_pred eeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-EEEEee--CCCeEEEEe
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS-LIVSGS--HDGTCKIWD 177 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~iwd 177 (312)
..+.+|.+.|.+++|+|+++.+++++.|+.|++||+++++....+..|...|.+++|+|++. ++++++ .|+.|++||
T Consensus 211 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 211 GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 78889999999999999999999999999999999999998888888999999999999765 555554 799999999
Q ss_pred CCCCceeeEcccCCCCcEEEEEECCCCCEEEEE--ecCCeEEEEEcCCCcEEEE--EEccCCceeEEEEEEEccCCcEEE
Q 021459 178 AGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG--TLDSTLKLWNYSAGKFLKI--YTGHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
+.+++....+. ....+..+.|+|++++++++ +.||.|++||+.+++.... +.+|......+ ...+++.+|+
T Consensus 291 ~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~---~~s~dg~~l~ 365 (401)
T 4aez_A 291 AATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYS---ALSPDGRILS 365 (401)
T ss_dssp TTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEE---EECTTSSEEE
T ss_pred CCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEE---EECCCCCEEE
Confidence 99988877664 34568889999999999994 4899999999998765544 45666654443 3457899999
Q ss_pred EeecCCeEEEEECCchheeecc
Q 021459 254 SGSEDNCVYVWDLQQKTMIQKL 275 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~ 275 (312)
+++.||.|++||+.+++.+...
T Consensus 366 s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 366 TAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EECTTSEEEEEECCC-------
T ss_pred EEeCCCcEEEEECCCCcccccc
Confidence 9999999999999887766554
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=252.51 Aligned_cols=256 Identities=16% Similarity=0.256 Sum_probs=223.1
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC-----Ce
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD-----RT 87 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~ 87 (312)
+...++.+|...|.+++|+|++++|++++.||.|++|++.+++.+..+. +...|.+++|+|+++++++++.+ +.
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE
Confidence 4456788999999999999999999999999999999999998888777 88999999999999999999998 99
Q ss_pred EEEEeCCCCce----------eeeeeecccc--cEEEEEEecCCCEEEEeecCCcEEEEEcCC-CeEEEEeeecCcCeEE
Q 021459 88 LRIWDARTPFD----------CLKTLRGHSD--FVFCVNFNPQSNLIVSGSFDESIRIWEVKT-GKCTRVIRAHSMPVTS 154 (312)
Q Consensus 88 v~~wd~~~~~~----------~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~v~~ 154 (312)
|++||+..... ....+..|.. .+.+++|+|+++.+++++.||.|++||+++ ++....+..|...|.+
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 99999864321 2334445555 899999999999999999999999999998 7888888889999999
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCC--------------eEEEEE
Q 021459 155 VHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDS--------------TLKLWN 220 (312)
Q Consensus 155 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--------------~i~v~d 220 (312)
++|+|++++|++++.|+.|++||+++++....+. ....+..+.|+|+++++++++.++ .+++||
T Consensus 224 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred EEECCCCCEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 9999999999999999999999999988777664 445678889999999999999888 899999
Q ss_pred cCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeec
Q 021459 221 YSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQK 274 (312)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 274 (312)
..+++.+..+.+|.....++ ...+++++|++++.||.|++|++........
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~---~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTV---AISPQGTSYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEE---EECTTSSEEEEEETTSEEEEEEECHHHHTCC
T ss_pred cCCCcchhheecccCcEEEE---EECCCCCEEEEEcCCCeEEEEECccccchhH
Confidence 99999999998887764443 3457899999999999999999987654433
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.4e-36 Score=259.44 Aligned_cols=260 Identities=22% Similarity=0.405 Sum_probs=215.2
Q ss_pred eecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC
Q 021459 17 TLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP 96 (312)
Q Consensus 17 ~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 96 (312)
.+.+|...|++++|+|+|++|++|+.||.|++|++.+++.+..+.+|...+.+++++ +.+|++|+.|+.+++||....
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc
Confidence 345788899999999999999999999999999999999999999999999988774 679999999999999999887
Q ss_pred ceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE----EEEeeecCcCeEEEEEccCCC-EEEE--eeC
Q 021459 97 FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC----TRVIRAHSMPVTSVHFNRDGS-LIVS--GSH 169 (312)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~ 169 (312)
...+..+.+|...+..+.++|+++.+++++.|+.|++||..+++. +.....|...|.+++|+|++. ++++ |+.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 777788899999999999999999999999999999999987653 345667888999999999665 4444 568
Q ss_pred CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe--cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc
Q 021459 170 DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT--LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT 247 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
|+.|++||+.++.....+.. ...+..+.|+|+++.+++++ .|+.|++||+.+++.+..+.+|...+.++ ...+
T Consensus 300 D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l---~~sp 374 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL---TMSP 374 (420)
T ss_dssp TCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE---EECT
T ss_pred CCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEE---EEcC
Confidence 99999999999988776643 34566777999999888765 78999999999999999999998875544 3457
Q ss_pred CCcEEEEeecCCeEEEEECCchheeecccCCccceE
Q 021459 248 NGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVI 283 (312)
Q Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 283 (312)
++.+|++|+.||+|++||+.+.....+.+.+...+.
T Consensus 375 dg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 375 DGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp TSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred CCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 899999999999999999987666555554544433
No 87
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.4e-36 Score=248.45 Aligned_cols=252 Identities=30% Similarity=0.508 Sum_probs=216.1
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
...+++.+|...|++++|+|++++|++++.|+.|++|+............+...+..+.+++++++|++++.|+.+++||
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 34567889999999999999999999999999999999999888888888889999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccEEEEEEecCC--CEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCC
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNPQS--NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
+...........+|...+.+++|++++ ..+++++.|+.|++||+++++....+..|..+|++++|+|++++|++|+.|
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 987655556667899999999998865 578899999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc---------cCCceeEEE
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG---------HTNKKYCIT 241 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---------~~~~~~~~~ 241 (312)
+.|++||+++.+.+..+.. ...+..+.++|++.++ +++.|+.|++||++++..+..+.. |... +.
T Consensus 237 g~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~---v~ 310 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDG--GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ---CT 310 (340)
T ss_dssp CEEEEEETTTTEEEEEEEC--SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCC---EE
T ss_pred CeEEEEEeccCceeeeecC--CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC---EE
Confidence 9999999999888776643 3467888899987654 566799999999988876655432 3333 33
Q ss_pred EEEEccCCcEEEEeecCCeEEEEECCchh
Q 021459 242 STFSVTNGKYIVSGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 270 (312)
.....+++++|++|+.||.|++||+++++
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 34455789999999999999999998764
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.9e-37 Score=262.10 Aligned_cols=253 Identities=15% Similarity=0.223 Sum_probs=215.9
Q ss_pred eeceeeecccccceEEEEECCC----C---CEEEEEeCCCeEEEEeCCCcce-----EEEeeec-----cCCEEEEEEc-
Q 021459 12 YRHFKTLTAHSRAVSCVKFSND----G---TLLASASLDKTVIIWSASSLAL-----VHRFVGH-----SEGISDLAWS- 73 (312)
Q Consensus 12 ~~~~~~~~~h~~~v~~~~~s~~----~---~~l~t~~~d~~i~vw~~~~~~~-----~~~~~~~-----~~~v~~~~~~- 73 (312)
......+.+|..+|++++|+|+ + ++|++++.|+.|++|++.+++. +..+..| ...|.+++|+
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 4456778899999999999999 9 9999999999999999988876 7888888 5899999999
Q ss_pred ---cCCCe-EEEEcCCCeEEEEeCCC------Cceeee-----ee-------ecccccEEEEEEecCCCEEEEeecCCcE
Q 021459 74 ---SDSHY-ICSASDDRTLRIWDART------PFDCLK-----TL-------RGHSDFVFCVNFNPQSNLIVSGSFDESI 131 (312)
Q Consensus 74 ---~~~~~-l~~~~~d~~v~~wd~~~------~~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~s~~~dg~i 131 (312)
|++++ |++++.|+.|++||+.+ .. .+. .+ ..|...+.+++|+|++ .+++++.||.|
T Consensus 132 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 132 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL-TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CC----CEEEEEEETTSCEEEEEEESSSSHHHHT-TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred ccCCCCceEEEEEeCCCcEEEEeCCccccccccc-eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999876 32 233 44 3478889999999999 99999999999
Q ss_pred EEEEcCCCeEEEEeee---c---CcCeEEEEEccCCCEEEEeeCC---CeEEEEeCCCCceeeEcccC------------
Q 021459 132 RIWEVKTGKCTRVIRA---H---SMPVTSVHFNRDGSLIVSGSHD---GTCKIWDAGEGACLKTLIDD------------ 190 (312)
Q Consensus 132 ~~wd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~------------ 190 (312)
++||+++++.+..+.. | ..++.+++|+|++++|++++.| +.|++||+++++.+..+...
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 9999999999988888 8 8999999999999999999999 99999999998877776541
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE------cc---------------CCceeEEEEEEEccCC
Q 021459 191 KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT------GH---------------TNKKYCITSTFSVTNG 249 (312)
Q Consensus 191 ~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~~ 249 (312)
+...+..+.|+|++++|++++.|+.|++||+++++.+..+. .| ......+ .+.+++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~---~~~~~g 366 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV---KFLKKG 366 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE---EEECTT
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE---Eecccc
Confidence 45678889999999999999999999999999999988888 65 4443333 334666
Q ss_pred ----------cEEEEeecCCeEEEEECCch
Q 021459 250 ----------KYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 250 ----------~~l~~~~~dg~i~iwd~~~~ 269 (312)
++|++++.||.|++||+.++
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999998764
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.9e-38 Score=265.06 Aligned_cols=244 Identities=14% Similarity=0.109 Sum_probs=196.1
Q ss_pred eeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc-eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC
Q 021459 60 FVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT 138 (312)
Q Consensus 60 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~ 138 (312)
...+..+|.+++|+|++++|++++.|+.|++||+.+.. +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 34467889999999999999999999999999998653 56777889999999999999999999999999999999998
Q ss_pred Ce---EEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce---eeEcccCCCCcEEEEEECCCCCEEEEEec
Q 021459 139 GK---CTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC---LKTLIDDKDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 139 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+...+...+..++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 76 5566778999999999999999999999999999999988763 45554436677899999999999999999
Q ss_pred CCeEEEEEcCC------------------CcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe---
Q 021459 213 DSTLKLWNYSA------------------GKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM--- 271 (312)
Q Consensus 213 d~~i~v~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 271 (312)
|+.|++||++. ++.+..+ .|.....+ ....+++++|++++.||.|++||+.+.+.
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~---~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA---VGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE---EEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE---EEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 99999999853 2333344 55554333 34457899999999999999999998877
Q ss_pred -eecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 272 -IQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 272 -~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+..+.+|...|.+++|+|++++|++++.| .+.+|..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~---~~~~~~~ 279 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNY---SPILLQG 279 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSS---SEEEECC
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCC---cEEEEEe
Confidence 78889999999999999999999887633 3446654
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-38 Score=270.55 Aligned_cols=272 Identities=14% Similarity=0.246 Sum_probs=212.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCcceEEEe-eeccCCEEEEEEcc-CCCeEEEEcCCCeEEEEeCCC---Cc--eeee
Q 021459 29 KFSNDGTLLASASLDKTVIIWSASSLALVHRF-VGHSEGISDLAWSS-DSHYICSASDDRTLRIWDART---PF--DCLK 101 (312)
Q Consensus 29 ~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~wd~~~---~~--~~~~ 101 (312)
.|+|++..+++++ .|+ .+++++..+ .+|...|++++|+| ++++|++|+.|+.|++||+.+ .. ....
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 4677777777654 377 456777777 88999999999999 999999999999999999864 21 1122
Q ss_pred eeecccccEEEEEEecCCCEEEEeecCCcEEEEEcC---CCeEEEEeee------------cCcCeEEEE--EccCCCEE
Q 021459 102 TLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK---TGKCTRVIRA------------HSMPVTSVH--FNRDGSLI 164 (312)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l 164 (312)
. .+|...|.+++|+|+++.|++++.||.|++||+. +++....... +...+.++. +++++.++
T Consensus 107 ~-~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 107 T-YDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp E-EECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred e-ccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 2 2589999999999999999999999999999994 5544443332 334455655 55789999
Q ss_pred EEeeCCCeEEEEeCCCCceeeEcccC-CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE-ccCCceeEEEE
Q 021459 165 VSGSHDGTCKIWDAGEGACLKTLIDD-KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT-GHTNKKYCITS 242 (312)
Q Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~ 242 (312)
++++.|+.|++||+++++.+..+... +...+..++|+|++++|++++.||.|++||++.++.+..+. .+.....++..
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 99999999999999999888777653 45678889999999999999999999999999998888775 44433333221
Q ss_pred E-EEccCCcEEEEeecCCeEEEEECCchheeecccC--------------------------CccceEEEEEcCCCceEE
Q 021459 243 T-FSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG--------------------------HTDSVISVTCHPTENKIA 295 (312)
Q Consensus 243 ~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------------h~~~v~~l~~~p~~~~l~ 295 (312)
. ...+++.+|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ ++++|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 1 1124677999999999999999987765544432 66778999999 778999
Q ss_pred EeeecCCeeEEEEeec
Q 021459 296 SAGLDGDRTVRVWVQD 311 (312)
Q Consensus 296 ~~~~dgd~~v~iw~~~ 311 (312)
+++.| ++|++|++.
T Consensus 345 s~~~d--~~i~~wd~~ 358 (437)
T 3gre_A 345 TDEAT--SSIVMFSLN 358 (437)
T ss_dssp EEGGG--TEEEEEETT
T ss_pred ecCCC--CeEEEEECC
Confidence 99966 599999974
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.7e-36 Score=251.40 Aligned_cols=245 Identities=18% Similarity=0.215 Sum_probs=209.7
Q ss_pred eeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc-eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC
Q 021459 61 VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG 139 (312)
Q Consensus 61 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~ 139 (312)
..|..+|.+++|+|++++|++++.|+.|++||+.+.. +.+..+.+|...|.+++|+|+++++++++.||.|++||++++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 4588999999999999999999999999999987752 257778899999999999999999999999999999999988
Q ss_pred eEEEEe--eecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce---eeEcccCCCCcEEEEEECCCCCEEEEEecCC
Q 021459 140 KCTRVI--RAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC---LKTLIDDKDPAVSFAKFSPNGKFILVGTLDS 214 (312)
Q Consensus 140 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
+....+ ..|...+.+++|+|+++++++++.|+.|++||+..+.. ...+...+...+..+.|+|++++|++++.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 755443 56888999999999999999999999999999987652 3344344567788999999999999999999
Q ss_pred eEEEEEcC------------------CCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeeccc
Q 021459 215 TLKLWNYS------------------AGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLD 276 (312)
Q Consensus 215 ~i~v~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (312)
.|++||++ .++.+..+..|.....++ ...+++++|++++.||.|++||+.+++.+..+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV---CFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE---EECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE---EECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 99999953 567777777676654433 344788999999999999999999999999999
Q ss_pred CCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 277 GHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 277 ~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.|...|.+++|+|++.+++++ .|+.|++|++.
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~---~d~~i~i~~~~ 273 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG---HDCFPVLFTYD 273 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE---TTSSCEEEEEE
T ss_pred cCCCCeEEEEEecCCCEEEEE---eCCeEEEEEcc
Confidence 999999999999999877765 35689999874
No 92
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-37 Score=263.46 Aligned_cols=262 Identities=11% Similarity=0.080 Sum_probs=206.4
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceee
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~ 100 (312)
-...|.+++|+|||+++||++.|++|+ +...++ .+.+|...|.+++|+|+| .++.+.+|+.+.. . .
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~-~ 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-G-L 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-C-S
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccc---eecCCCccEEEEEECCCC-------CcceEEEEeCCCc-e-E
Confidence 457899999999999999999999999 644443 447899999999999999 4666666654321 1 2
Q ss_pred eeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCc-----CeEEEEEccCCCEEEEeeCCCeEEE
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM-----PVTSVHFNRDGSLIVSGSHDGTCKI 175 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~i 175 (312)
..+ .|.+.|.+++|+|+|..|++++.||.|++||... ++..+. |.. .+.+++|+|||++|++|+.||+|++
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 222 4578899999999999999999999999999554 555566 665 4999999999999999999999999
Q ss_pred EeCCCCce-------eeEcc---cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE---EEEEE-ccCCceeEEE
Q 021459 176 WDAGEGAC-------LKTLI---DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF---LKIYT-GHTNKKYCIT 241 (312)
Q Consensus 176 wd~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~-~~~~~~~~~~ 241 (312)
||+.++.. +..+. ..+...+..++|+|+| +++++.|+.|++||+.++.. ...+. +|......+.
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 99988752 34432 3345678899999999 88889999999999987763 24453 5554444443
Q ss_pred EEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEE--cCCCceEEEeeecCCeeEEEEeec
Q 021459 242 STFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTC--HPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+. +..||+++ +|.|++||+.++.......+|.+.|..++| +|++..+++++.| ++ ++|..+
T Consensus 234 --Fs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed--G~-klw~~d 296 (588)
T 2j04_A 234 --IV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT--SY-KVLLED 296 (588)
T ss_dssp --EE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC--EE-EEEESS
T ss_pred --EE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC--CC-EEEeec
Confidence 33 57888887 699999999887664444479999999999 9999999998855 57 999864
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-36 Score=255.30 Aligned_cols=240 Identities=22% Similarity=0.420 Sum_probs=200.2
Q ss_pred cccceEEEEECCC----CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEcc-CCCeEEEEcCCCeEEEEeCCC
Q 021459 21 HSRAVSCVKFSND----GTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSS-DSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 21 h~~~v~~~~~s~~----~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~~wd~~~ 95 (312)
|...|++++|+|+ +++|++|+.||.|++|+..+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6788999999999 67999999999999999999999999999999999999999 899999999999999999987
Q ss_pred Cceeeeee---ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee--------------------------
Q 021459 96 PFDCLKTL---RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR-------------------------- 146 (312)
Q Consensus 96 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-------------------------- 146 (312)
. +.+..+ .+|...|.+++|+|+++.+++++.||.|++||+++++....+.
T Consensus 148 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 148 D-TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp T-EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred C-eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 5 445555 6799999999999999999999999999999998775443332
Q ss_pred --ecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce--------------eeEcccCCCCcEEEEEECCC--CCEEE
Q 021459 147 --AHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC--------------LKTLIDDKDPAVSFAKFSPN--GKFIL 208 (312)
Q Consensus 147 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~l~ 208 (312)
.|...|.+++|+ ++++++++.|+.|++||+++... +..+. .+...+..++|+|+ +++|+
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEE
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCcEEE
Confidence 288899999998 67999999999999999887643 22222 23334556678888 99999
Q ss_pred EEecCCeEEEEEcCCCc----EEEEEEcc--CCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 209 VGTLDSTLKLWNYSAGK----FLKIYTGH--TNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 209 ~~~~d~~i~v~d~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
+++.||.|++||+.+++ ....+..| ... +......+++++|++++.||.|++||+.
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAA---IRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCTTCCSC---EEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEecCCcEEEEECCCCCCccccceEEcccccCCc---eEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999998875 34456655 333 3333445789999999999999999985
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=253.92 Aligned_cols=267 Identities=12% Similarity=0.098 Sum_probs=204.4
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC--------ceeee
Q 021459 30 FSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP--------FDCLK 101 (312)
Q Consensus 30 ~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~--------~~~~~ 101 (312)
+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|+.+++|+.... .+.+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 44678899999999999999999998877776 467888889888 999999999999976531 12122
Q ss_pred ee-ecccccEEEEEEec--CCCEEEEeecCCcEEEEEcCCCeEEEEee-ecCcCeEEEEEccCCCEEEEeeCCCeEEEEe
Q 021459 102 TL-RGHSDFVFCVNFNP--QSNLIVSGSFDESIRIWEVKTGKCTRVIR-AHSMPVTSVHFNRDGSLIVSGSHDGTCKIWD 177 (312)
Q Consensus 102 ~~-~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (312)
.. .+|.+.|.+++|+| +++++++++.||+|++||+++++...... .+...+.+++|+|++.++++|+.||.|++||
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 22 35668899999999 99999999999999999999998866553 3455799999999999999999999999999
Q ss_pred CCCCcee-eEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEE--EEEEEccCCcEEEE
Q 021459 178 AGEGACL-KTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCI--TSTFSVTNGKYIVS 254 (312)
Q Consensus 178 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 254 (312)
+++++.. ..+...+...+..++|+|++.+|++++ ++.|++||+++++.+..+.........+ ......+++++|++
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 9998877 555543667899999999999999999 5599999999876544333211111111 12334578999999
Q ss_pred eec-CCeEEEEECCchheeecccCCccceEEEEEcC---CCceEEEeeecCCeeEEEE
Q 021459 255 GSE-DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHP---TENKIASAGLDGDRTVRVW 308 (312)
Q Consensus 255 ~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p---~~~~l~~~~~dgd~~v~iw 308 (312)
++. |+.|++|++......... .++..++|+| +...+++++.|| .++++
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~--~~~~~ 329 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDG--GIAAI 329 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETT--EEEEE
T ss_pred ecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCC--ceEEE
Confidence 988 999999998654432222 5677888888 777888888665 45544
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-35 Score=251.36 Aligned_cols=242 Identities=14% Similarity=0.255 Sum_probs=196.5
Q ss_pred cccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcceEEEeeec---cCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 19 TAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLALVHRFVGH---SEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 19 ~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
.+|...|.+++|+| ++++|++++.|+.|++|++.+ ..+..+..+ ...|.+++|+|++++|++++.|+.|++||+.
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC
Confidence 47999999999999 789999999999999999986 444455444 4789999999999999999999999999995
Q ss_pred CCceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCC----CeEEEEeeecCcCeEEEEEcc-CCCEEEEee
Q 021459 95 TPFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKT----GKCTRVIRAHSMPVTSVHFNR-DGSLIVSGS 168 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 168 (312)
.+.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+++ ++....+ .|...|.+++|+| ++++|++++
T Consensus 194 --~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 194 --GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp --SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred --CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 346777889999999999999998 999999999999999987 5555555 6889999999999 999999999
Q ss_pred CCCeEEEEeCCCCceeeEcccCC----------------CCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc
Q 021459 169 HDGTCKIWDAGEGACLKTLIDDK----------------DPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG 232 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 232 (312)
.|+.|++||++++.....+..+. ...+..+.++|++++ +++.|+.|++||+.+++.+..+.+
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~ 348 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD 348 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC
Confidence 99999999998876654443211 122333456666665 667899999999999999888876
Q ss_pred cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 233 HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
+.... .+....+.+++++|++|+ ||.|++||+++
T Consensus 349 ~~~~~-~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 349 PNAAG-IISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTBCS-CCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCc-eEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 43111 122223457899999997 99999999864
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=252.16 Aligned_cols=261 Identities=21% Similarity=0.358 Sum_probs=209.0
Q ss_pred CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCC-eEEEEcCCCeEEEEeC----CCCce-----eeeeeec--------
Q 021459 44 KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSH-YICSASDDRTLRIWDA----RTPFD-----CLKTLRG-------- 105 (312)
Q Consensus 44 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~----~~~~~-----~~~~~~~-------- 105 (312)
..+.+|+............|...|.+++|+|+++ +|++++.|+.|++||+ .++.. ....+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASS 104 (425)
T ss_dssp ---------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---
T ss_pred cccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccc
Confidence 3456787776666555666779999999999999 9999999999999999 76541 2333332
Q ss_pred --ccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce
Q 021459 106 --HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC 183 (312)
Q Consensus 106 --~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (312)
|.+.|.+++|+|++++|++++.||.|++|| .+++....+..|..+|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp ---CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 677999999999999999999999999999 66777888889999999999999999999999999999999987665
Q ss_pred eeEcc-------------------------------------------------------cCCCCcEEEEEECCCCCEEE
Q 021459 184 LKTLI-------------------------------------------------------DDKDPAVSFAKFSPNGKFIL 208 (312)
Q Consensus 184 ~~~~~-------------------------------------------------------~~~~~~~~~~~~~~~~~~l~ 208 (312)
...+. ..+...+..++|+|++++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 43221 12334577788999999999
Q ss_pred EEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEc
Q 021459 209 VGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCH 288 (312)
Q Consensus 209 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 288 (312)
+++.|+.|++||+++++.+..+..|.....++ .+ .+++ .+++++.||.|++||+.+.+.+..+..|...|.+++|+
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~--~~-~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSA--SW-VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCSSCEEEE--EE-ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEcCCCEEEEEECCCCccceEecCCCccEEEE--EE-CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 99999999999999988888887776654433 33 3566 99999999999999999999888999999999999999
Q ss_pred CCCceEEEeeecCCeeEEEEeec
Q 021459 289 PTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 289 p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|++++|++++.| +.|++|++.
T Consensus 340 ~~~~~l~~~~~d--g~i~i~~~~ 360 (425)
T 1r5m_A 340 QDGQKYAVAFMD--GQVNVYDLK 360 (425)
T ss_dssp TTSSEEEEEETT--SCEEEEECH
T ss_pred CCCCEEEEEECC--CeEEEEECC
Confidence 999999999855 589999873
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=251.08 Aligned_cols=248 Identities=19% Similarity=0.279 Sum_probs=203.9
Q ss_pred cccccceEEEEECCC---CCEEEEEeCCCeEEEEeCCCcc-eEEEeeeccCCEEEEEE------ccCCCeEEEEcCCCeE
Q 021459 19 TAHSRAVSCVKFSND---GTLLASASLDKTVIIWSASSLA-LVHRFVGHSEGISDLAW------SSDSHYICSASDDRTL 88 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~---~~~l~t~~~d~~i~vw~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~v 88 (312)
.+|..+|++++|+|+ +++|++++.||.|++|++.+++ .+..+.+|...|.+++| +|++++|++++.|+.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 379999999999998 6999999999999999999887 77888899999999954 6789999999999999
Q ss_pred EEEeCCCCceeeeeeecccc----cEEEEE----EecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc-
Q 021459 89 RIWDARTPFDCLKTLRGHSD----FVFCVN----FNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR- 159 (312)
Q Consensus 89 ~~wd~~~~~~~~~~~~~~~~----~v~~~~----~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~- 159 (312)
++||+.+....+..+..|.+ .+.+++ |+|+++++++++.||.|++||+++++... ...|...+.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence 99999876545555655443 788888 67899999999999999999999988644 456888999999999
Q ss_pred --CCCEEEEeeCCCeEEEEeCCCCceeeEcc----cCCCCcEEEEEECCCCC-EEEEEecCCeEEEEEcCCC--------
Q 021459 160 --DGSLIVSGSHDGTCKIWDAGEGACLKTLI----DDKDPAVSFAKFSPNGK-FILVGTLDSTLKLWNYSAG-------- 224 (312)
Q Consensus 160 --~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~-------- 224 (312)
++.++++++.||.|++||+++++....+. ..+...+..+.|+|+++ +|++++.||.|++||++.+
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 99999999999999999998765543332 24566788899999998 8999999999999999754
Q ss_pred -----------cEEEEEEccCCceeEEEEEEEccCCcEEE-EeecCCeEEEEECCchh
Q 021459 225 -----------KFLKIYTGHTNKKYCITSTFSVTNGKYIV-SGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 225 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~ 270 (312)
+.+..+..|.....+ ..+.+++++|+ +++.||.|++||+.+.+
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~---~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISS---LDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEE---EEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCccccccccceeeccccCCCCeeE---EEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 245566667665443 33457788887 89999999999997654
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.2e-35 Score=252.37 Aligned_cols=248 Identities=22% Similarity=0.407 Sum_probs=204.5
Q ss_pred EEeeeccCCEEEEEEccC-CCeEEEEcCCCeEEEEeCCCC---------ceeeeeeecccccEEEEEEecCCC-EEEEee
Q 021459 58 HRFVGHSEGISDLAWSSD-SHYICSASDDRTLRIWDARTP---------FDCLKTLRGHSDFVFCVNFNPQSN-LIVSGS 126 (312)
Q Consensus 58 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~wd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~ 126 (312)
.....|.+.|++++|+|+ +.+|++++.||.|++||+... ...+..+.+|...+.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445679999999999997 689999999999999998651 345667788999999999999988 999999
Q ss_pred cCCcEEEEEcCCCeE-------EEEeeecCcCeEEEEEcc-CCCEEEEeeCCCeEEEEeCCCC---ceeeEcccCCCCcE
Q 021459 127 FDESIRIWEVKTGKC-------TRVIRAHSMPVTSVHFNR-DGSLIVSGSHDGTCKIWDAGEG---ACLKTLIDDKDPAV 195 (312)
Q Consensus 127 ~dg~i~~wd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~ 195 (312)
.||.|++||+..+.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ .....+ ..+...+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCCe
Confidence 999999999987422 345667889999999999 7789999999999999999976 334333 3455678
Q ss_pred EEEEECCCCC-EEEEEecCCeEEEEEcCC-CcEEEEEEccCCceeEEEEEEEccCC-cEEEEeecCCeEEEEECCc----
Q 021459 196 SFAKFSPNGK-FILVGTLDSTLKLWNYSA-GKFLKIYTGHTNKKYCITSTFSVTNG-KYIVSGSEDNCVYVWDLQQ---- 268 (312)
Q Consensus 196 ~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~---- 268 (312)
..++|+|++. ++++|+.||.|++||++. ...+..+..|.....++ .+. +++ .+|++++.||.|++||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i--~~s-p~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWS-PHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE--EEC-SSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE--EEC-CCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 8999999987 688999999999999987 45677777777664443 333 555 5799999999999999976
Q ss_pred ----------hheeecccCCccceEEEEEcCCCc-eEEEeeecCCeeEEEEeec
Q 021459 269 ----------KTMIQKLDGHTDSVISVTCHPTEN-KIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 269 ----------~~~~~~~~~h~~~v~~l~~~p~~~-~l~~~~~dgd~~v~iw~~~ 311 (312)
.+.+..+.+|...|.+++|+|+++ .|++++. |+.|++|+++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~--dg~i~iw~~~ 409 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSE--DNIMQVWQMA 409 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEET--TSEEEEEEEC
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEEC--CCCEEEeEcc
Confidence 255667788999999999999998 7788874 5699999985
No 99
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.2e-37 Score=259.64 Aligned_cols=240 Identities=16% Similarity=0.147 Sum_probs=175.1
Q ss_pred ccCCCeEEEEcCCCeEEEEeCCCCce----eeeeeecccccEEEEEEec--------CCCEEEEeecCCcEEEEEcCCCe
Q 021459 73 SSDSHYICSASDDRTLRIWDARTPFD----CLKTLRGHSDFVFCVNFNP--------QSNLIVSGSFDESIRIWEVKTGK 140 (312)
Q Consensus 73 ~~~~~~l~~~~~d~~v~~wd~~~~~~----~~~~~~~~~~~v~~~~~~~--------~~~~l~s~~~dg~i~~wd~~~~~ 140 (312)
.+++.+|++++.|++|++||.+++.. .+..+.+|.+.|.+++|+| |+++|++++.|++|++||++++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 34566899999999999999876532 2345678999999999998 78899999999999999999988
Q ss_pred EEEEeeecCcCeEEEEEccCCC-EEEEeeCCCeEEEEeCCCCceeeEccc------------------------CCCCcE
Q 021459 141 CTRVIRAHSMPVTSVHFNRDGS-LIVSGSHDGTCKIWDAGEGACLKTLID------------------------DKDPAV 195 (312)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~------------------------~~~~~~ 195 (312)
....+..|..++.+++|+|++. +|++++.|+.|++||+++++....... .+...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 8888888999999999999874 799999999999999987754332210 112223
Q ss_pred EEEEE-CCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCcee----------------EEEEEEEcc-CCcEEEEeec
Q 021459 196 SFAKF-SPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKY----------------CITSTFSVT-NGKYIVSGSE 257 (312)
Q Consensus 196 ~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~l~~~~~ 257 (312)
..+.| .|+++.+++++.|+++++||+..+.....+..+..... .+...+.++ ++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 33444 58999999999999999999987765544433322111 011122222 4456788999
Q ss_pred CCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeecC
Q 021459 258 DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQDR 312 (312)
Q Consensus 258 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~~ 312 (312)
||.|++||+.+++....+.+|..+|.+|+|+|+|++||+++.||-..++++.+.|
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~gf~~ 392 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMGFTR 392 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEGGGCC
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeCccc
Confidence 9999999999988888888899999999999999999999976544455554443
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=274.99 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=197.1
Q ss_pred eeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCC--CcceEEEeeeccCCEEEEEEccC--CCeEEEEcCCCeEEEE
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSAS--SLALVHRFVGHSEGISDLAWSSD--SHYICSASDDRTLRIW 91 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~~w 91 (312)
..+.+|.++|++++|+|++++|++|+.||.|++|+.. +.+.+..+.+|...|.+++|+|+ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4678999999999999999999999999999999987 55677788899999999999988 9999999999999999
Q ss_pred eCCCCc-eeeeeeecccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCe--EEEEeeecCcCeEEEEEcc-------
Q 021459 92 DARTPF-DCLKTLRGHSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGK--CTRVIRAHSMPVTSVHFNR------- 159 (312)
Q Consensus 92 d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~------- 159 (312)
|+.++. .....+.+|...|.+++|+|+ ++.+++++.||.|++||++++. ....+..|...|.++.|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 998753 256667789999999999999 9999999999999999998773 3445667889999999999
Q ss_pred ------CCCEEEEeeCCCeEEEEeCCCCce----eeEcccCCCCcEEEEEECCC---CCEEEEEecCCeEEEEEcCCCcE
Q 021459 160 ------DGSLIVSGSHDGTCKIWDAGEGAC----LKTLIDDKDPAVSFAKFSPN---GKFILVGTLDSTLKLWNYSAGKF 226 (312)
Q Consensus 160 ------~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~v~d~~~~~~ 226 (312)
++.++++|+.||.|++||++++.. ...+ ..+...+..++|+|+ +.+|++++.||.|++||++++..
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 589999999999999999987632 2222 334566777888888 78888888888888888765421
Q ss_pred EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEE
Q 021459 227 LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVR 306 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~ 306 (312)
.. ........+|...|.+++|+|+++++++++.| +.|+
T Consensus 242 ~~----------------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D--g~I~ 279 (753)
T 3jro_A 242 PW----------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--NKVT 279 (753)
T ss_dssp CC----------------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECSS--SCEE
T ss_pred cc----------------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcCC--CEEE
Confidence 00 00112223455666677777777777766643 4677
Q ss_pred EEeec
Q 021459 307 VWVQD 311 (312)
Q Consensus 307 iw~~~ 311 (312)
+|+++
T Consensus 280 vwd~~ 284 (753)
T 3jro_A 280 LWKEN 284 (753)
T ss_dssp CCBCC
T ss_pred EEecC
Confidence 77653
No 101
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=264.19 Aligned_cols=205 Identities=12% Similarity=0.103 Sum_probs=175.6
Q ss_pred eeecccccceEEEEECCC------CCEEEEEeCCCeEEEEeCCCcce-----------EEEeeeccCCEEEEEEccCCCe
Q 021459 16 KTLTAHSRAVSCVKFSND------GTLLASASLDKTVIIWSASSLAL-----------VHRFVGHSEGISDLAWSSDSHY 78 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~------~~~l~t~~~d~~i~vw~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~ 78 (312)
.++.+|.+.|.+++|+|+ +.+||+++.||+|++|++..+.. ...+.+|...|.+++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 346678899999999997 57999999999999999976531 23567899999999999864 8
Q ss_pred EEEEcCCCeEEEEeCCCCceeeeeeecccccEEEE--EEecCC-CEEEEeecCCcEEEEEcCCCeEEEEeeecCc--CeE
Q 021459 79 ICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCV--NFNPQS-NLIVSGSFDESIRIWEVKTGKCTRVIRAHSM--PVT 153 (312)
Q Consensus 79 l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~--~v~ 153 (312)
|++|+.||+|++||++++......+.+|.+.|.++ .|+|++ ++|++++.|++|++||++++++...+..|.. .+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 99999999999999987544455678999999999 568887 8999999999999999998887766666653 478
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcC
Q 021459 154 SVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYS 222 (312)
Q Consensus 154 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 222 (312)
+++|+|+++.+++++.|+.|++||++++.....+.. +...+..++|+|++++|++|+.|++|++||..
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 999999999999999999999999999887766654 56678889999999999999999999999863
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-35 Score=254.17 Aligned_cols=250 Identities=24% Similarity=0.415 Sum_probs=208.4
Q ss_pred eeecccccceEEEEECCC-CCEEEEEeCCCeEEEEeCCC----------cceEEEeeeccCCEEEEEEccCCC-eEEEEc
Q 021459 16 KTLTAHSRAVSCVKFSND-GTLLASASLDKTVIIWSASS----------LALVHRFVGHSEGISDLAWSSDSH-YICSAS 83 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~-~~~l~t~~~d~~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 83 (312)
.....|.+.|++++|+|+ +.+|++++.||.|++|++.. ...+..+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 455689999999999997 67999999999999999876 566778889999999999999988 999999
Q ss_pred CCCeEEEEeCCCCce------eeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCC---eEEEEeeecCcCeE
Q 021459 84 DDRTLRIWDARTPFD------CLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTG---KCTRVIRAHSMPVT 153 (312)
Q Consensus 84 ~d~~v~~wd~~~~~~------~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~ 153 (312)
.||.|++||+..... ....+.+|...|.+++|+| ++..+++++.||.|++||++++ +....+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999976321 1345668999999999999 6789999999999999999977 46667778999999
Q ss_pred EEEEccCCC-EEEEeeCCCeEEEEeCCCC-ceeeEcccCCCCcEEEEEECCCCC-EEEEEecCCeEEEEEcCC-------
Q 021459 154 SVHFNRDGS-LIVSGSHDGTCKIWDAGEG-ACLKTLIDDKDPAVSFAKFSPNGK-FILVGTLDSTLKLWNYSA------- 223 (312)
Q Consensus 154 ~~~~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~------- 223 (312)
+++|+|++. ++++|+.||.|++||+++. ..+..+. .+...+..+.|+|+++ +|++++.|+.|++||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 999999887 6889999999999999984 4444443 3556788899999985 689999999999999976
Q ss_pred -------CcEEEEEEccCCceeEEEEEEEccCCc-EEEEeecCCeEEEEECCch
Q 021459 224 -------GKFLKIYTGHTNKKYCITSTFSVTNGK-YIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 224 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~ 269 (312)
...+..+.+|......+ .+.+++. +|++++.||.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~---~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDF---SWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEE---EECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEE---EECCCCCCEEEEEECCCCEEEeEcccc
Confidence 24556666666554333 3346677 8999999999999998764
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.9e-36 Score=254.74 Aligned_cols=250 Identities=20% Similarity=0.356 Sum_probs=205.8
Q ss_pred ceeeecccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCc-------ceEEEeeeccCCEEEEEEccCC-CeEEEEcC
Q 021459 14 HFKTLTAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSL-------ALVHRFVGHSEGISDLAWSSDS-HYICSASD 84 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 84 (312)
....+.+|.+.|++++|+| ++++|++|+.||.|++|++.++ +.+..+.+|...|.+++|+|++ ++|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3456788999999999999 9999999999999999999887 5567888999999999999998 69999999
Q ss_pred CCeEEEEeCCCCceeeeee--ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe-eecCcC-eEEEEEccC
Q 021459 85 DRTLRIWDARTPFDCLKTL--RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI-RAHSMP-VTSVHFNRD 160 (312)
Q Consensus 85 d~~v~~wd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~-v~~~~~~~~ 160 (312)
|+.|++||+.++ +.+..+ .+|.+.|.+++|+|+++.|++++.||.|++||+++++.+..+ ..|... +..+.|+|+
T Consensus 153 dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 153 DNVILVWDVGTG-AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TSCEEEEETTTT-EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred CCEEEEEECCCC-CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 999999999875 556666 789999999999999999999999999999999999988887 677665 899999999
Q ss_pred CCEEEEe---eCCCeEEEEeCCCCce-eeEcccCCCCcEEEEEECCCCCEEEE-EecCCeEEEEEcCCCcE-EEEEEccC
Q 021459 161 GSLIVSG---SHDGTCKIWDAGEGAC-LKTLIDDKDPAVSFAKFSPNGKFILV-GTLDSTLKLWNYSAGKF-LKIYTGHT 234 (312)
Q Consensus 161 ~~~l~~~---~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~-~~~~~~~~ 234 (312)
++++++| +.|+.|++||+++... ...........+..+.|+|++++|++ ++.|+.|++||+.+++. +..+..+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 9999999 7999999999987654 22222234455777889999999975 55799999999998873 44444332
Q ss_pred --CceeEEEEEEEccCCcEEEEeecCCeEEEEECCch
Q 021459 235 --NKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 235 --~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
.....+ ...+++.+++ +.++.+++|++.++
T Consensus 312 ~~~~v~~~---~~sp~~~~~~--s~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 312 SKESQRGM---GYMPKRGLEV--NKCEIARFYKLHER 343 (402)
T ss_dssp CSSCCSEE---EECCGGGSCG--GGTEEEEEEEEETT
T ss_pred cCCcccce---EEecccccce--ecceeEEEEEcCCC
Confidence 333333 3346677765 45679999998764
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.4e-34 Score=244.68 Aligned_cols=286 Identities=14% Similarity=0.167 Sum_probs=228.2
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEE-----EeeeccCCEEEEEEccCCCeEEEEcCCCeEE
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVH-----RFVGHSEGISDLAWSSDSHYICSASDDRTLR 89 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 89 (312)
...+..+ ..+.+++|+|++.++++++.++.|++||..+++... .+.+|...|.+++|+++++++++++.|+.|+
T Consensus 116 ~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 3334444 345689999988888888889999999999988776 3446788999999999999999999999999
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEecCCCEEE-EeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV-SGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
+||+.+. +.+..+..|...+.+++|+|+++.++ +++.++.|++||+++++....+..+ ..+.+++|+|+++.+++++
T Consensus 195 ~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 195 VFDLKTL-AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EEETTTC-CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEE
T ss_pred EEECCCc-eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEE
Confidence 9999875 45666777888999999999999875 4457899999999999887776654 4589999999999999888
Q ss_pred --------CCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEE-EEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 169 --------HDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFI-LVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 169 --------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
.|+.|++||+.+++....+.. ...+..++|+|+++.+ ++++.++.|++||+.+++.+..+.. .....
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~- 348 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-FDKPN- 348 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEE-
T ss_pred CCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-CCCCC-
Confidence 488999999998876655422 2346678899999755 5568899999999998888776653 33322
Q ss_pred EEEEEEccCCcEEEEeec---------------CCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCee
Q 021459 240 ITSTFSVTNGKYIVSGSE---------------DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRT 304 (312)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~ 304 (312)
.....++++++++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. ++++
T Consensus 349 --~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-~d~~ 424 (433)
T 3bws_A 349 --TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF-LDHQ 424 (433)
T ss_dssp --EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET-TTTE
T ss_pred --eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC-CCCe
Confidence 2334477888877766 57999999998888877765 457899999999999987764 2579
Q ss_pred EEEEeec
Q 021459 305 VRVWVQD 311 (312)
Q Consensus 305 v~iw~~~ 311 (312)
|++|+++
T Consensus 425 i~v~~~~ 431 (433)
T 3bws_A 425 IRVYRRD 431 (433)
T ss_dssp EEEEEET
T ss_pred EEEEEec
Confidence 9999975
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=232.94 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=210.1
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc---ceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEE
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL---ALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLR 89 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 89 (312)
.....+..|...|.+++|+|++++|++++.|+.+++|++... +.+..+.+|...|.+++| +++++++++.|+.|+
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE
Confidence 344567789999999999999999999999999999998654 556778889999999999 577999999999999
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEeee-cCcCeEEEEEccCCCEEEEe
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVIRA-HSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 167 (312)
+||. ......+..|...+.++.|.| +++.+++++.||.|++|| .++....+.. |...+.+++|+|++. ++++
T Consensus 128 ~~d~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~ 201 (313)
T 3odt_A 128 VWKE---GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISC 201 (313)
T ss_dssp EEET---TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEE
T ss_pred EEcC---CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEc
Confidence 9992 355667788999999999988 899999999999999999 4455666665 888999999999998 9999
Q ss_pred eCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc
Q 021459 168 SHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT 247 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
+.|+.|++||+++++.+..+.. +...+..++|+|++ .|++++.|+.|++||+++++.+..+..+......+ ...+
T Consensus 202 ~~dg~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~---~~~~ 276 (313)
T 3odt_A 202 SNDGLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSV---DCMS 276 (313)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEE---EECT
T ss_pred cCCCeEEEEECCchhhhhhhhc-CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEE---EEcc
Confidence 9999999999999888777654 45678889999999 58899999999999999999998888887654333 3446
Q ss_pred CCcEEEEeecCCeEEEEECCchheeecc
Q 021459 248 NGKYIVSGSEDNCVYVWDLQQKTMIQKL 275 (312)
Q Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (312)
+++ +++++.||.|++||+.+++.....
T Consensus 277 ~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 277 NGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp TSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 676 667999999999999887665443
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-35 Score=253.01 Aligned_cols=246 Identities=15% Similarity=0.330 Sum_probs=197.2
Q ss_pred eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce----------eeeeeeccc------------ccEEEEEEecCC
Q 021459 62 GHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD----------CLKTLRGHS------------DFVFCVNFNPQS 119 (312)
Q Consensus 62 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~----------~~~~~~~~~------------~~v~~~~~~~~~ 119 (312)
.+.+.|.+++|+|++++|++|+.||.|++||+.+... ....+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 3678999999999999999999999999999876431 466778898 889999999998
Q ss_pred --CEEEEeecCCcEEEEEcCCCeEE---------------------------------------EE-eeecCcCeEEEEE
Q 021459 120 --NLIVSGSFDESIRIWEVKTGKCT---------------------------------------RV-IRAHSMPVTSVHF 157 (312)
Q Consensus 120 --~~l~s~~~dg~i~~wd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 157 (312)
..+++++.|+.|++||+.+++.. .. ...|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999764432 12 3568899999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeCCCC-ceeeEc------ccCCCCcEEEEEECCCC-CEEEEEecCCeEEEEEcCCCcE---
Q 021459 158 NRDGSLIVSGSHDGTCKIWDAGEG-ACLKTL------IDDKDPAVSFAKFSPNG-KFILVGTLDSTLKLWNYSAGKF--- 226 (312)
Q Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~------~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~--- 226 (312)
+|++++|++| .|+.|++||+++. +....+ ...+...+..++|+|++ .+|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999843 333321 33456678899999998 9999999999999999998876
Q ss_pred -EEEEEccCCce---------eEEEEEEEccCCcEEEEeecCCeEEEEECCc-hheeecccCCccc--------------
Q 021459 227 -LKIYTGHTNKK---------YCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ-KTMIQKLDGHTDS-------------- 281 (312)
Q Consensus 227 -~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~-------------- 281 (312)
+..+..+.... ..+......+++++|++++. |.|++||+.. ++.+..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 67777665410 01333444578999999999 9999999987 7778888888642
Q ss_pred -eEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 282 -VISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 282 -v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+..++|+|++++|++++.| ++|++|+..
T Consensus 344 ~~~~~~~s~~~~~l~s~s~d--g~v~iwd~~ 372 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYN--NFFRMFDRN 372 (447)
T ss_dssp CCCCEEECTTSSEEEEECST--TEEEEEETT
T ss_pred cceEEEECCCCCEEEEeccC--CEEEEEEcC
Confidence 3349999999999999955 599999874
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.2e-34 Score=238.24 Aligned_cols=278 Identities=12% Similarity=0.146 Sum_probs=204.9
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeE-EEEcCCCeEEEEe
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYI-CSASDDRTLRIWD 92 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~wd 92 (312)
.+.++..|...|++++|+|||++|++|+.++ +++|+..+++...... ...+..+++.++++.+ ++++.|+.|++||
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 3445678999999999999999999988775 7899998876654433 2357788899988877 5677889999999
Q ss_pred CCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-eEEEEeeecCcCeEEEEEccCCCEEEE--eeC
Q 021459 93 ARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-KCTRVIRAHSMPVTSVHFNRDGSLIVS--GSH 169 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~ 169 (312)
..++ +.+..+. +...|.+++++++. ++.+ .++.|++||+.++ +.+..+.. +...+++++ .+++. |+.
T Consensus 88 ~~~~-~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~ 157 (355)
T 3vu4_A 88 DVKK-QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFN 157 (355)
T ss_dssp TTTT-EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSC
T ss_pred CCCC-cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCc
Confidence 9875 4455554 56789999998763 4433 4789999999988 65555544 444566777 45555 689
Q ss_pred CCeEEEEeCCCCc----------------eeeEcccCCCCcEEEEEECCCCCEEEEEecCCe-EEEEEcCCCcEEEEEE-
Q 021459 170 DGTCKIWDAGEGA----------------CLKTLIDDKDPAVSFAKFSPNGKFILVGTLDST-LKLWNYSAGKFLKIYT- 231 (312)
Q Consensus 170 d~~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~- 231 (312)
+|.|++||+.++. ....+ ..+...+..++|+|++++|++++.|++ |++||+++++.+..+.
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp TTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 9999999998764 13333 445677899999999999999999998 9999999999998887
Q ss_pred c-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhee--eccc---------------------CCccceEEEEE
Q 021459 232 G-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI--QKLD---------------------GHTDSVISVTC 287 (312)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~---------------------~h~~~v~~l~~ 287 (312)
+ |.....+ ..+.+++++|++++.||.|++||+...... ..+. .+......++|
T Consensus 237 g~h~~~v~~---~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 237 GLDRADVVD---MKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp TTCCSCEEE---EEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred CCCCCcEEE---EEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 4 6665443 344578999999999999999999654211 1111 11223467899
Q ss_pred cCCCceEEEeeecCCeeEEEEee
Q 021459 288 HPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 288 ~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+|+++.+++++. |+++++|++
T Consensus 314 ~~d~~~l~~~~~--dg~~~~~~~ 334 (355)
T 3vu4_A 314 ISESSLVVVWPH--TRMIETFKV 334 (355)
T ss_dssp SSSSEEEEEETT--TTEEEEEEE
T ss_pred eCCCCEEEEEeC--CCeEEEEEE
Confidence 999999999985 468999986
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=244.74 Aligned_cols=284 Identities=19% Similarity=0.371 Sum_probs=201.3
Q ss_pred cccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccC---CCeEEEEcCCCeEEEEeCC
Q 021459 19 TAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSD---SHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 19 ~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~~wd~~ 94 (312)
.+|...|.+++|+| ++++|++++.||.|++|++.+++....+. +...+.++.|++. +.++++++.|+.|++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 35999999999999 77899999999999999999988776665 7788999999985 4499999999999999998
Q ss_pred CCceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCe-EEEEe---------------eecCcCeEEEEE
Q 021459 95 TPFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGK-CTRVI---------------RAHSMPVTSVHF 157 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~-~~~~~---------------~~~~~~v~~~~~ 157 (312)
++ +.+..+.+|...|.+++|+|+++ .+++++.||.|++||++++. ....+ ..|...|.+++|
T Consensus 175 ~~-~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 175 SG-SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SS-CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred Cc-ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 75 55677888999999999999998 58999999999999998764 23333 467888999999
Q ss_pred ccCCCEEEEeeCCCeEEEEeCCCCceeeEcccC----CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc
Q 021459 158 NRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDD----KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH 233 (312)
Q Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 233 (312)
+|+++++++++.|+.|++||+.+++........ .............+..+++++.++.|++||+.+++.+..+.+|
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 999999999999999999999987654433211 1111222223344566777788999999999999999999888
Q ss_pred CCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 234 TNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.....++ ...+++.+|++|+.||.|++||+.+.+.+.....+. ....+.|......+. .++++.+++|...
T Consensus 334 ~~~v~~~---~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~W~~~ 404 (408)
T 4a11_B 334 YKTVDCC---VFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSS-SDEEGGTSAWSHP 404 (408)
T ss_dssp SSCEEEE---EEETTTTEEEEEETTSCEEEEEECC-------------------------------------------
T ss_pred CCeEEEE---EEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecc-cCccCceeecCCc
Confidence 7765444 334789999999999999999999887765544332 223444433333222 2356799999754
No 109
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-35 Score=255.11 Aligned_cols=252 Identities=17% Similarity=0.266 Sum_probs=194.0
Q ss_pred eeeecccccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcceEEEeeec--cCCEEEEEEccCCCeEEEEcCCCeEEEE
Q 021459 15 FKTLTAHSRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLALVHRFVGH--SEGISDLAWSSDSHYICSASDDRTLRIW 91 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~~w 91 (312)
...+.+|.+.|++++|+| ++++|++|+.||+|++||+.+.........+ ...+.+++|+|++++|++|+.||.|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 345678999999999998 7899999999999999999876543333322 3457899999999999999999999999
Q ss_pred eCCCCceeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCeEEE---EeeecCcCeEEEEEccCCCEEEEe
Q 021459 92 DARTPFDCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGKCTR---VIRAHSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 92 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
|++. +.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+++.+... ....|..+|++++|+|++++|+++
T Consensus 237 d~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 237 NMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp ESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred ccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 9865 34667789999999999999876 78899999999999998765433 235688999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeeEcccCCCC-----cEEEEEECCCCCEEEEEe------------cCCeEEEEEcCCCcEEEEE
Q 021459 168 SHDGTCKIWDAGEGACLKTLIDDKDP-----AVSFAKFSPNGKFILVGT------------LDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~ 230 (312)
+.|+.|++||++++.....+..+... ......|+|++..++++. .++.|++||..+++.+..+
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999999999988766554332211 111234677776666653 2357999999999887776
Q ss_pred E-ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe
Q 021459 231 T-GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM 271 (312)
Q Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 271 (312)
. .|.....++ ..+.+++.+|++|+ |+.|+|||+++++.
T Consensus 395 ~~~~~~~v~s~--~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 395 YDPESSGISSL--NEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCSSCCCCCCE--EEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred eCCCCCcEEEE--EEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 4 344433332 23457899999876 78999999987653
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=231.37 Aligned_cols=245 Identities=22% Similarity=0.416 Sum_probs=208.1
Q ss_pred ecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc
Q 021459 18 LTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 97 (312)
+.+|...|++++|+|++++|++|+.||.|++|+..+++.+..+.+|...+.++.+ ++..+++++.++.+++|+.....
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc
Confidence 4568889999999999999999999999999999999999999999988876554 56799999999999999988877
Q ss_pred eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE----EEEeeecCcCeEEEEEccCCCEE---EEeeCC
Q 021459 98 DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC----TRVIRAHSMPVTSVHFNRDGSLI---VSGSHD 170 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d 170 (312)
..+..+.+|...+.++.+.++++++++++.|+.|++||+++++. ......+...+..+.++|++..+ ++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 77788889999999999999999999999999999999987653 23445577789999999976533 467788
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe--cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccC
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT--LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTN 248 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
+.|++||........... ....+..+.++|+++.+++++ .|+.|++||+++++.+..+.+|.....++ ...++
T Consensus 221 ~~i~lwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l---~~spd 295 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL---TMSPD 295 (318)
T ss_dssp CEEEEEETTTCCEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE---EECTT
T ss_pred CEEEEEeccccccccccc--ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEE---EEcCC
Confidence 999999998877665443 344577788999999887764 78999999999999999999998875554 34578
Q ss_pred CcEEEEeecCCeEEEEECCch
Q 021459 249 GKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 249 ~~~l~~~~~dg~i~iwd~~~~ 269 (312)
+++|++|+.||.|++||+.+.
T Consensus 296 g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 296 GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEecCCeEEEEECCCC
Confidence 999999999999999998654
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-34 Score=247.97 Aligned_cols=259 Identities=27% Similarity=0.544 Sum_probs=206.1
Q ss_pred eceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 13 RHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
+....+.+|...|.+++| ++++|++|+.||.|++||..+++.+..+.+|...|.+++|+ +.++++|+.|+.|++||
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEE
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEe
Confidence 345677899999999998 78899999999999999999999999999999999999996 45999999999999999
Q ss_pred CCCCcee--eeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCC
Q 021459 93 ARTPFDC--LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 93 ~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
+.+.... ...+.+|...|.+++| +++.+++++.||.|++||+++++.+..+..|...+.++.+ +++++++|+.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~d 315 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 315 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCC
Confidence 9875332 2567789999999998 6789999999999999999999999999999999999998 46799999999
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCc---------EEEEEEccCCceeEEE
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGK---------FLKIYTGHTNKKYCIT 241 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---------~~~~~~~~~~~~~~~~ 241 (312)
|.|++||+++++.+..+.. +...+..+.+ ++.+|++|+.||.|++||+.++. .+..+.+|.....++.
T Consensus 316 g~i~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 392 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEG-HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 392 (435)
T ss_dssp SCEEEEETTTCCEEEEECC-CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE
T ss_pred CeEEEEECCCCCEEEEEeC-CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEE
Confidence 9999999999988877654 4455776666 78899999999999999997665 7777888877665553
Q ss_pred EEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEc
Q 021459 242 STFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCH 288 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 288 (312)
. ++.+|++|+.||.|++||+.+........ ...+..++.|.
T Consensus 393 ~-----~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 393 F-----DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp E-----CSSCEEECCSSSEEEEEC-----------------------
T ss_pred e-----CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeee
Confidence 2 57889999999999999998765443322 22334444443
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.5e-34 Score=241.26 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=171.8
Q ss_pred ccccceEEEEECCCCCEEEEE--eCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc
Q 021459 20 AHSRAVSCVKFSNDGTLLASA--SLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~--~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 97 (312)
.+...+.+++|||||++++++ +.|++|++||..+++.+..+. |...|.+++|+|+|++|++++.++ +++|+..++.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 355678999999999987654 478999999999999887775 778899999999999999998665 5566555543
Q ss_pred ee-eeeeecccccEEEEEEecCCCEEEEeecCC----cEEEEEcCCCeE----EEEeeecCcCeEEEEEccCCCEEEEee
Q 021459 98 DC-LKTLRGHSDFVFCVNFNPQSNLIVSGSFDE----SIRIWEVKTGKC----TRVIRAHSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 98 ~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
.. .....+|...+.+++|+|+++.+++++.++ .+++||+..... ...+..|..+|++++|+|+|++|++|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 33 234567888999999999999999999887 588899876653 235567888999999999999999999
Q ss_pred CCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC
Q 021459 169 HDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG 224 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 224 (312)
.|+.|++||+++++.+..+...+...+..++|+|||++|++++.|++|+|||+...
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999888876667788999999999999999999999999998643
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=254.12 Aligned_cols=247 Identities=13% Similarity=0.118 Sum_probs=200.6
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccC-----CEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSE-----GISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
.|...|.+++|||+|.+||+++.||.+++|+..+ ++..+. |.. .|.+++|+|+|++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688999999999999999999999999999654 555556 655 59999999999999999999999999998
Q ss_pred CCce------eeeee----ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE---EEEe-eecCcCeEEEEEccC
Q 021459 95 TPFD------CLKTL----RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC---TRVI-RAHSMPVTSVHFNRD 160 (312)
Q Consensus 95 ~~~~------~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~~-~~~~~~v~~~~~~~~ 160 (312)
+... .+..+ .+|.+.|.+++|+|++ +++++.|++|++||+..++. ...+ ..|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence 7531 24554 6678899999999999 88889999999999987763 2445 3678899999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEE--CCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCcee
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKF--SPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKY 238 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 238 (312)
++.+++++ ++.|++||+.+++......+ +...+..+.+ +|++..++++..||+ ++|....
T Consensus 236 g~~LASa~-~~tIkLWd~~~~~~~~~~~g-h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~--------------- 297 (588)
T 2j04_A 236 DYKVVLTC-PGYVHKIDLKNYSISSLKTG-SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE--------------- 297 (588)
T ss_dssp TTEEEEEC-SSEEEEEETTTTEEEEEECS-CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS---------------
T ss_pred CCEEEEEe-CCeEEEEECCCCeEEEEEcC-CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc---------------
Confidence 57888887 69999999988776333323 5566777899 999999999999999 9998761
Q ss_pred EEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeee
Q 021459 239 CITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL 299 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~ 299 (312)
+ . ..+++..+++. |+++++|+...+. ...+++ ...|.+++++|+|+.+|+++.
T Consensus 298 -~--~-~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 298 -L--H-VTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp -E--E-EECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred -E--E-ECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 1 1 23566666553 9999999875443 445555 778999999999999998874
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.6e-34 Score=238.20 Aligned_cols=241 Identities=14% Similarity=0.128 Sum_probs=199.0
Q ss_pred eeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc--eeeeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEc
Q 021459 60 FVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF--DCLKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEV 136 (312)
Q Consensus 60 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~ 136 (312)
..+|...|.+++|+|++++|++++.|+.|++||+.+.. .......+|...|.+++|+|+++ ++++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 35799999999999999999999999999999987653 12445568999999999999999 9999999999999999
Q ss_pred -CCCeEEEEeee--cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCC---------CceeeEcccCCCCcEEEEEECCCC
Q 021459 137 -KTGKCTRVIRA--HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGE---------GACLKTLIDDKDPAVSFAKFSPNG 204 (312)
Q Consensus 137 -~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
.+++. ..+.. |...|.+++|+| +.++++++.|+.|++||+++ ++.+..+. +...+..+.++|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSSE
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCCc
Confidence 87764 66777 999999999999 99999999999999999886 55444443 45668888899887
Q ss_pred CEEEEEecCCeEEEEEcCC-CcE--EEEEEccCCceeEEEEEEEcc-CCcEEEEeecCCeEEEEECCch------heeec
Q 021459 205 KFILVGTLDSTLKLWNYSA-GKF--LKIYTGHTNKKYCITSTFSVT-NGKYIVSGSEDNCVYVWDLQQK------TMIQK 274 (312)
Q Consensus 205 ~~l~~~~~d~~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~~ 274 (312)
+++++.|+.|++||+++ +.. ......+.... ......+ +++++++++.||.|++|++... +....
T Consensus 163 --l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i---~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 163 --LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI---RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp --EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCE---EEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred --EEEEeCCCeEEEEECCccccccceeeecCCCCce---eEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 89999999999999987 543 22333344433 3333446 7899999999999999999876 66677
Q ss_pred ccCCcc---------ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 275 LDGHTD---------SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 275 ~~~h~~---------~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+.+|.. .|.+++|+|++++|++++.| ++|++|++.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~vwd~~ 281 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD--GIISCWNLQ 281 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT--SCEEEEETT
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCC--ceEEEEcCc
Confidence 777755 99999999999999999955 589999974
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=237.18 Aligned_cols=256 Identities=17% Similarity=0.277 Sum_probs=202.5
Q ss_pred EeCCCcceEEEeeeccCCEEEEEEccC---CCeEEEEcCCCeEEEEeCCC-CceeeeeeecccccEEEEEEecCCCEEEE
Q 021459 49 WSASSLALVHRFVGHSEGISDLAWSSD---SHYICSASDDRTLRIWDART-PFDCLKTLRGHSDFVFCVNFNPQSNLIVS 124 (312)
Q Consensus 49 w~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~~wd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 124 (312)
++....+.+..+.+|...|++++|+|+ |++|++|+.||.|++||+.+ .......+.+|...|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 345566677788899999999999999 59999999999999999987 43444678889999999999999999999
Q ss_pred eecCCcEEEEEcCCCeEEEEeeecCcCeEEEEE--ccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECC
Q 021459 125 GSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHF--NRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSP 202 (312)
Q Consensus 125 ~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
++.||.|++||+++++... +..|..+|.+++| +|+++++++++.|+.|++||+++++.+..+.... .+....+
T Consensus 104 ~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~-- 178 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE--RCYCADV-- 178 (368)
T ss_dssp EETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS--CEEEEEE--
T ss_pred EcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC--CceEEEe--
Confidence 9999999999999988665 5678999999999 8999999999999999999999988776664332 3333333
Q ss_pred CCCEEEEEecCCeEEEEEcCCCcEEEEEE-c-cCCceeEEEEEEEcc-CCcEEEEeecCCeEEEEECCch---heeeccc
Q 021459 203 NGKFILVGTLDSTLKLWNYSAGKFLKIYT-G-HTNKKYCITSTFSVT-NGKYIVSGSEDNCVYVWDLQQK---TMIQKLD 276 (312)
Q Consensus 203 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~-~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~ 276 (312)
....+++++.++.+++||++......... . ......++....... ....+++++.||.|++||+... .....+.
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 34588889999999999998765433222 1 112222332222111 1234999999999999999876 5566777
Q ss_pred CCcc------------ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 277 GHTD------------SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 277 ~h~~------------~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+|.. .|.+++|+|++++|++++.| ++|++|++.
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d--g~i~iwd~~ 303 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD--GRFSFWDKD 303 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETT--SCEEEEETT
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccC--CeEEEEECC
Confidence 7766 79999999999999999955 589999974
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2e-33 Score=227.67 Aligned_cols=289 Identities=15% Similarity=0.163 Sum_probs=204.5
Q ss_pred eeceeeeccccc----ceEEEEECCCCC---EEEEEeCCCeEEEEeCCCc---ceEEEeeeccCCEEEEEEccCCC-eEE
Q 021459 12 YRHFKTLTAHSR----AVSCVKFSNDGT---LLASASLDKTVIIWSASSL---ALVHRFVGHSEGISDLAWSSDSH-YIC 80 (312)
Q Consensus 12 ~~~~~~~~~h~~----~v~~~~~s~~~~---~l~t~~~d~~i~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~ 80 (312)
++.+.+|....+ .+.++.|-..+- .++++++ ..|++|+..+. ++++.+..|..+|..+.+.||.. ++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 25 LQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceee
Confidence 455555555444 345666644332 5777776 58999999988 78899999999999999999754 444
Q ss_pred EEcCCCeE-EEEeCCC-Cc----eeeeeeecccccEEEEEEecCCCEEEEee--cCCcEEEEEc-CCCeEEEEeeecCcC
Q 021459 81 SASDDRTL-RIWDART-PF----DCLKTLRGHSDFVFCVNFNPQSNLIVSGS--FDESIRIWEV-KTGKCTRVIRAHSMP 151 (312)
Q Consensus 81 ~~~~d~~v-~~wd~~~-~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~-~~~~~~~~~~~~~~~ 151 (312)
.+-..-.+ .++-+.- +. .......+|...+..+ ++++.+.+++ .|+.|++|++ ..++.+..+..|...
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~ 180 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE 180 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS
T ss_pred eeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc
Confidence 33222111 1221111 11 1111223455555554 5666666643 5999999999 458888888899999
Q ss_pred eEEEEEcc---CCCEEEEeeCCCeEEEEeCCCCceeeEcccCCC--CcEEEEEECCCCCEE------------EEEecCC
Q 021459 152 VTSVHFNR---DGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKD--PAVSFAKFSPNGKFI------------LVGTLDS 214 (312)
Q Consensus 152 v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l------------~~~~~d~ 214 (312)
++.++|+| ++++|++++.|++|++||+.+++.++++..++. ..+..++|+|+|.++ ++|+.|+
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~ 260 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF 260 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCE
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc
Confidence 99999999 779999999999999999999999888864332 245566799999876 5577899
Q ss_pred eEEEEEcCCCcEEEEEE-----ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceE-EEEEc
Q 021459 215 TLKLWNYSAGKFLKIYT-----GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVI-SVTCH 288 (312)
Q Consensus 215 ~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~~ 288 (312)
+|++||..+++.+..+. +|... .+...+ ++.++++|+.||+|+|||+.+++.+.++.+|...+. .++|+
T Consensus 261 tIklWd~~tgk~l~v~~~~~p~Gh~~~--~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS 335 (356)
T 2w18_A 261 QLIVINPKTTLSVGVMLYCLPPGQAGR--FLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS 335 (356)
T ss_dssp EEEEEETTTTEEEEEEEECCCTTCCCC--EEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC
T ss_pred EEEEEECCCCEEEEEEEeeccCCCcce--eEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC
Confidence 99999999998876653 33332 222111 267899999999999999999999999999987665 58999
Q ss_pred CCCceEEEeeecCCeeEEEEeec
Q 021459 289 PTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 289 p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|++++|++|+.| ++||||++.
T Consensus 336 PDG~~LaSGS~D--~TIklWd~~ 356 (356)
T 2w18_A 336 GTDSHLLAGQKD--GNIFVYHYS 356 (356)
T ss_dssp SSSSEEEEECTT--SCEEEEEEC
T ss_pred CCCCEEEEEECC--CcEEEecCC
Confidence 999999999955 699999863
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.4e-32 Score=229.52 Aligned_cols=265 Identities=12% Similarity=0.106 Sum_probs=211.7
Q ss_pred CEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeE-EEEcCCCeEEEEeCCCCceeeeeeecccccEEEE
Q 021459 35 TLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYI-CSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCV 113 (312)
Q Consensus 35 ~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~ 113 (312)
.++++++.|+.|++||..+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.++ +.+..+..+. .+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-NVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-EEEEEEECSS-SEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC-eEEEEEECCC-Cccce
Confidence 467889999999999999999888887664 58999999999976 67778999999999875 4455555444 89999
Q ss_pred EEecCCCEEEE-eecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEE-EEeeCCCeEEEEeCCCCceeeEcccCC
Q 021459 114 NFNPQSNLIVS-GSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLI-VSGSHDGTCKIWDAGEGACLKTLIDDK 191 (312)
Q Consensus 114 ~~~~~~~~l~s-~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (312)
+|+|+++.++. ++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++....+...
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 157 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-
Confidence 99999998754 456799999999999887777654 468999999999977 68888999999999998877665432
Q ss_pred CCcEEEEEECCCCCEE-EEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEee---cCCeEEEEECC
Q 021459 192 DPAVSFAKFSPNGKFI-LVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGS---EDNCVYVWDLQ 267 (312)
Q Consensus 192 ~~~~~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~ 267 (312)
.....+.|+|+++.+ ++++.++.|++||+++++.+..+..+. . +......+++++|++++ .++.|++||+.
T Consensus 158 -~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~---~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 158 -RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A---PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E---EEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C---ccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 345778899999987 566788999999999988777665432 2 22233457788888877 68999999999
Q ss_pred chheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 268 QKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 268 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+++.+..+..|. .+.+++|+|++++++.++. .+++|++|+..
T Consensus 233 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~-~d~~v~v~d~~ 274 (391)
T 1l0q_A 233 TNKITARIPVGP-DPAGIAVTPDGKKVYVALS-FXNTVSVIDTA 274 (391)
T ss_dssp TTEEEEEEECCS-SEEEEEECTTSSEEEEEET-TTTEEEEEETT
T ss_pred CCeEEEEEecCC-CccEEEEccCCCEEEEEcC-CCCEEEEEECC
Confidence 888887777665 4789999999988854432 45799999864
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.5e-31 Score=223.31 Aligned_cols=256 Identities=16% Similarity=0.166 Sum_probs=204.4
Q ss_pred ceeeecccccceEEEEECCCCCEE-EEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEE
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLL-ASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIW 91 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~w 91 (312)
....+..|. .+.+++|+|++++| ++++.|+.|++||..+++.+..+..+. .+.+++|+|++++|+ +++.++.|++|
T Consensus 24 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~ 101 (391)
T 1l0q_A 24 VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVI 101 (391)
T ss_dssp EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEE
Confidence 344555554 58999999999976 677789999999999998887777554 899999999999775 55567999999
Q ss_pred eCCCCceeeeeeecccccEEEEEEecCCCEE-EEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEE-EEeeC
Q 021459 92 DARTPFDCLKTLRGHSDFVFCVNFNPQSNLI-VSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLI-VSGSH 169 (312)
Q Consensus 92 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~ 169 (312)
|+.+. +.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+.+++....+..+. .+..++|+|+++.+ ++++.
T Consensus 102 d~~~~-~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 102 DTTSN-TVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp ETTTT-EEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETT
T ss_pred ECCCC-eEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCC
Confidence 99875 445555544 467899999999977 688889999999999998887776654 56899999999877 57788
Q ss_pred CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe---cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEc
Q 021459 170 DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT---LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSV 246 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
++.|++||+++++....+.. ...+..++++|++++|++++ .++.|++||+.+++.+..+..+.. . .. ....
T Consensus 179 ~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~--~~-~~~s 252 (391)
T 1l0q_A 179 SMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-P--AG-IAVT 252 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-E--EE-EEEC
T ss_pred CCEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-c--cE-EEEc
Confidence 89999999999877665532 34567788999999999887 689999999999988887776543 2 22 2334
Q ss_pred cCCcEE-EEeecCCeEEEEECCchheeecccCCcc
Q 021459 247 TNGKYI-VSGSEDNCVYVWDLQQKTMIQKLDGHTD 280 (312)
Q Consensus 247 ~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~h~~ 280 (312)
+++++| ++++.|+.|++||+.+++....+..|..
T Consensus 253 ~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 253 PDGKKVYVALSFXNTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred cCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcC
Confidence 677766 7778999999999999888777766544
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=232.52 Aligned_cols=244 Identities=16% Similarity=0.141 Sum_probs=196.9
Q ss_pred cccccceEEEEECCCCCEE-EEEeCCCeEEEEeCC--CcceEEEee--eccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 19 TAHSRAVSCVKFSNDGTLL-ASASLDKTVIIWSAS--SLALVHRFV--GHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l-~t~~~d~~i~vw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
.+|.+.|++++|+|++++| ++++.||.|++|++. +++.+..+. .|...|.+++|+|++++|++++.++.+++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 4678899999999999996 899999999999998 787777776 56789999999999999999999999999998
Q ss_pred CCCce---eeeeeecccccEEEEEEecC---CCEEEEeecCCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCCCEEEE
Q 021459 94 RTPFD---CLKTLRGHSDFVFCVNFNPQ---SNLIVSGSFDESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDGSLIVS 166 (312)
Q Consensus 94 ~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
.+... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +..|...|.+++|+ ++++|++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 76432 22366789999999999999 89999999999999999999887776 55899999999999 9999999
Q ss_pred eeCCCeEEEEeCCCCceeeEccc------------------------CCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEc
Q 021459 167 GSHDGTCKIWDAGEGACLKTLID------------------------DKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNY 221 (312)
Q Consensus 167 ~~~d~~i~iwd~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~ 221 (312)
++.|+.|++||+++++.+..+.. .....+..+.++|++++|++++ .++.|++||+
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 99999999999999887665531 1234577889999999999998 8999999999
Q ss_pred --CCC---cEEEEEEccCCceeEEEEEEEccCCcEEEEeec------CCeEEEEECC
Q 021459 222 --SAG---KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE------DNCVYVWDLQ 267 (312)
Q Consensus 222 --~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~ 267 (312)
..+ +.+..+..+ ... ..+.+. +++.++++++. +..|.+|.+.
T Consensus 338 ~~~~~~~l~~~~~~~~~-~~v--~~~~~~-~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 338 SEKQKGDLALKQIITFP-YNV--ISLSAH-NDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CSSSTTCEEEEEEEECS-SCE--EEEEEE-TTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ccCCCCceeeccEeccC-Cce--EEEEec-CCcEEEEEecccCCCCCCcceEEEEEE
Confidence 555 455566665 333 233344 44433343332 5557888764
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.6e-32 Score=227.04 Aligned_cols=245 Identities=13% Similarity=0.173 Sum_probs=179.9
Q ss_pred EEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEE-EEee
Q 021459 48 IWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLI-VSGS 126 (312)
Q Consensus 48 vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~ 126 (312)
+|+..+.+.+.....|...|.+++|+|++++|++|+.++ +++||..+.. ..... +...+..+++.++++.+ ++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA-HIMSQ--EMRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE-EEEEE--ECSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc-eeeee--ecCCeEEEEEcCCCCEEEEEEC
Confidence 455556666666788999999999999999999998765 7899987642 22222 22246778888888876 5678
Q ss_pred cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCC-ceeeEcccCCCCcEEEEEECCCCC
Q 021459 127 FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEG-ACLKTLIDDKDPAVSFAKFSPNGK 205 (312)
Q Consensus 127 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
.|++|++||+.+++.+..+. +..+|.++.++++. ++++ .++.|++||+.++ +.+..+.. ....+++++ .
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~ 148 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--G 148 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--T
T ss_pred CccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--c
Confidence 88999999999999888776 56689999998764 3333 4789999999887 55544432 344556777 5
Q ss_pred EEEE--EecCCeEEEEEcCCCc----------------EEEEEEccCCceeEEEEEEEccCCcEEEEeecCCe-EEEEEC
Q 021459 206 FILV--GTLDSTLKLWNYSAGK----------------FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNC-VYVWDL 266 (312)
Q Consensus 206 ~l~~--~~~d~~i~v~d~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~iwd~ 266 (312)
++++ |+.+|.|++||+.++. .+..+.+|.....++ ...+++++|++|+.||+ |++||+
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~---~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMV---RLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEE---EECTTSSEEEEEETTCSEEEEEET
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEE---EECCCCCEEEEEeCCCCEEEEEEC
Confidence 6666 5889999999998765 156677787765444 34578999999999998 999999
Q ss_pred Cchheeeccc-C-CccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 267 QQKTMIQKLD-G-HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 267 ~~~~~~~~~~-~-h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.+++.+..+. + |...|.+++|+|++++|++++.| ++|++|++.
T Consensus 226 ~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d--~~v~iw~~~ 270 (355)
T 3vu4_A 226 EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK--WTLHVFEIF 270 (355)
T ss_dssp TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT--CEEEEEESS
T ss_pred CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC--CEEEEEEcc
Confidence 9999988887 5 99999999999999999999955 699999974
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=229.08 Aligned_cols=229 Identities=12% Similarity=0.087 Sum_probs=178.1
Q ss_pred EccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcC---------CCeEE
Q 021459 72 WSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK---------TGKCT 142 (312)
Q Consensus 72 ~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~---------~~~~~ 142 (312)
+.+++.+|++|+.||.|++||+.++. .+..+. ...+.++.++|+ +++++.|++|++|+.. +++.+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~-~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSK-TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSS-CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCc-EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 44678899999999999999998753 343443 356777788887 9999999999999765 44444
Q ss_pred EEee-ecCcCeEEEEEcc--CCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEE
Q 021459 143 RVIR-AHSMPVTSVHFNR--DGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLW 219 (312)
Q Consensus 143 ~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~ 219 (312)
..+. .|..+|.+++|+| +++++++++.|+.|++||+++++............+..++|+|++.+|++|+.||.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 4443 5667899999999 999999999999999999999887655544455567888999999999999999999999
Q ss_pred EcCCCcEE-EEEEc-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccC---CccceE--EEEEcCCCc
Q 021459 220 NYSAGKFL-KIYTG-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG---HTDSVI--SVTCHPTEN 292 (312)
Q Consensus 220 d~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~--~l~~~p~~~ 292 (312)
|+++++.+ ..+.. |.....++ .+.+++.+|++++ ++.|++||+++.+.+..+.. |...+. +++|+|+++
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l---~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEV---KFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEE---EECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred ECCCCCCCccEEeccCCCCEEEE---EEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 99998876 66666 66654443 4457899999999 45999999998876655543 434444 699999999
Q ss_pred eEEEeeecCCeeEEEEeec
Q 021459 293 KIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 293 ~l~~~~~dgd~~v~iw~~~ 311 (312)
+|++++. +++.|++|+++
T Consensus 274 ~l~~~s~-~d~~i~v~~~~ 291 (343)
T 3lrv_A 274 NMIAYSN-ESNSLTIYKFD 291 (343)
T ss_dssp EEEEEET-TTTEEEEEEEC
T ss_pred EEEEecC-CCCcEEEEEEc
Confidence 9999884 15689999874
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.8e-31 Score=219.30 Aligned_cols=216 Identities=21% Similarity=0.377 Sum_probs=181.8
Q ss_pred eceeeecccccceEEEEECC--CCCEEEEEeCCCeEEEEeCCCc---------ceEEEeeeccCCEEEEEEccC--CCeE
Q 021459 13 RHFKTLTAHSRAVSCVKFSN--DGTLLASASLDKTVIIWSASSL---------ALVHRFVGHSEGISDLAWSSD--SHYI 79 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~--~~~~l~t~~~d~~i~vw~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l 79 (312)
+....+.+|...|++++|+| ++++|++++.||.|++|++..+ +.+..+..|...|.+++|+|+ +++|
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 45667789999999999999 6999999999999999999876 557778889999999999999 9999
Q ss_pred EEEcCCCeEEEEeCCCCceeeee-------------eecccccEEEEEEecC---CCEEEEeecCCcEEEEEcCCCeE--
Q 021459 80 CSASDDRTLRIWDARTPFDCLKT-------------LRGHSDFVFCVNFNPQ---SNLIVSGSFDESIRIWEVKTGKC-- 141 (312)
Q Consensus 80 ~~~~~d~~v~~wd~~~~~~~~~~-------------~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~-- 141 (312)
++++.|+.|++||+++... +.. ..+|...+.+++|+|+ ++.+++++.++.+.+|+...++.
T Consensus 128 ~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSD-LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV 206 (351)
T ss_dssp EEEETTCEEEEEECSSTTC-TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE
T ss_pred EEecCCCcEEEecCCChHH-hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee
Confidence 9999999999999876432 111 1257788999999997 89999999999998888877764
Q ss_pred EEEeeecCcCeEEEEEccCC----CEEEEeeCCCeEEEEeCCCC------------------------------------
Q 021459 142 TRVIRAHSMPVTSVHFNRDG----SLIVSGSHDGTCKIWDAGEG------------------------------------ 181 (312)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~------------------------------------ 181 (312)
...+..|..+|.+++|+|++ ++|++++.||.|++||++++
T Consensus 207 ~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (351)
T 3f3f_A 207 AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEE 286 (351)
T ss_dssp EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------------------------
T ss_pred eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccce
Confidence 55677899999999999998 89999999999999998764
Q ss_pred ----------ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 182 ----------ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 182 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
+.+..+ ..+...+..++|+|++++|++++.||.|++||+..++....+
T Consensus 287 ~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 287 KAELQSNLQVELLSEH-DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ----CCSEEEEEEEEE-CTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeeecccccccEEEEE-ecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 222222 234567888999999999999999999999999887655443
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.4e-32 Score=229.78 Aligned_cols=240 Identities=17% Similarity=0.157 Sum_probs=169.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE-----EEeeeccCCEEEEEEcc--------CCCeEEEEcCCCeEE
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALV-----HRFVGHSEGISDLAWSS--------DSHYICSASDDRTLR 89 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~ 89 (312)
..+....+++++.+|++++.|++|++|+..+++.. ..+.+|.+.|++++|+| ++++|++|+.|++|+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 33333444556778999999999999998877543 23568999999999998 789999999999999
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCCCeEEEE------------------------
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKTGKCTRV------------------------ 144 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~------------------------ 144 (312)
+||+.+.. .+....+|...+.+++|+|++ ++|++++.|++|++||+++++....
T Consensus 170 ~Wd~~~~~-~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 170 IWRLTDEG-PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp EEEEETTE-EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred EEECCCCc-eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 99997753 455566788899999999987 4799999999999999987754322
Q ss_pred -eeecCcCeEEEEEc-cCCCEEEEeeCCCeEEEEeCCCCceeeEcccCC------------------CCcEEEEEECC-C
Q 021459 145 -IRAHSMPVTSVHFN-RDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDK------------------DPAVSFAKFSP-N 203 (312)
Q Consensus 145 -~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~-~ 203 (312)
...|...+.++.|+ |+++.+++++.|+.+++||+..++....+.... ...+....+.+ +
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM 328 (393)
T ss_dssp ---CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCT
T ss_pred ecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCC
Confidence 13455678888886 799999999999999999998765443332110 11111222222 3
Q ss_pred CCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 204 GKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 204 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
+.++++|+.||.|++||..+++.......+.... ....+.++|++||+++++| +.+|.+.
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V---~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPI---VDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCCEEEEECSSCE---EEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEecCCCCcE---EEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 4466778889999999999988877777676653 3344568999999998877 6666553
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.1e-29 Score=216.91 Aligned_cols=282 Identities=12% Similarity=0.111 Sum_probs=216.1
Q ss_pred cccceEEEE---ECCCCCEEEEEe--------------CCC--eEEEEeCCCc--ceEEEeeeccCCEEEEEEccCCCeE
Q 021459 21 HSRAVSCVK---FSNDGTLLASAS--------------LDK--TVIIWSASSL--ALVHRFVGHSEGISDLAWSSDSHYI 79 (312)
Q Consensus 21 h~~~v~~~~---~s~~~~~l~t~~--------------~d~--~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l 79 (312)
....+..++ |+|+++.++..+ .++ .|..++..++ +.+..+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 456677888 899887665432 223 3334444333 444455444 456689999977888
Q ss_pred EEEcCCCeEEEEeCCCCceeee-----eeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEE
Q 021459 80 CSASDDRTLRIWDARTPFDCLK-----TLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTS 154 (312)
Q Consensus 80 ~~~~~d~~v~~wd~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 154 (312)
++++.++.|++||+.++. ... .+.+|.+.+.+++|+|+++.+++++.|+.|++||+++++....+..|...+.+
T Consensus 138 ~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQ-TVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EEBTTSSSEEEEETTTCC-EEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EEeCCCCeEEEEECCCCe-EeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 888889999999998753 333 34578889999999999999999999999999999999988888888889999
Q ss_pred EEEccCCCEEE-EeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe--------cCCeEEEEEcCCCc
Q 021459 155 VHFNRDGSLIV-SGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT--------LDSTLKLWNYSAGK 225 (312)
Q Consensus 155 ~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~v~d~~~~~ 225 (312)
++|+|+++.++ +++.++.|++||+++++....+.. ...+..++++|+++++++++ .|+.|++||+.+++
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 99999999885 555799999999998887766543 34477889999999999887 48899999999887
Q ss_pred EEEEEEccCCceeEEEEEEEccCCc-EEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecC---
Q 021459 226 FLKIYTGHTNKKYCITSTFSVTNGK-YIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDG--- 301 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dg--- 301 (312)
.+..+.. ..... ...+ .++++ ++++++.++.|++||+.+++....+. +...+.+++|+|+++.+++++.+.
T Consensus 295 ~~~~~~~-~~~~~--~~~~-~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~ 369 (433)
T 3bws_A 295 LIDTIGP-PGNKR--HIVS-GNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHP 369 (433)
T ss_dssp EEEEEEE-EECEE--EEEE-CSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCT
T ss_pred EEeeccC-CCCcc--eEEE-CCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcc
Confidence 7665532 22222 2233 45665 56778999999999999887777665 667899999999999888887543
Q ss_pred ----------CeeEEEEeec
Q 021459 302 ----------DRTVRVWVQD 311 (312)
Q Consensus 302 ----------d~~v~iw~~~ 311 (312)
|+.|++|+..
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETT
T ss_pred ccccccccccceEEEEEECC
Confidence 4589999863
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.1e-30 Score=211.76 Aligned_cols=198 Identities=18% Similarity=0.175 Sum_probs=154.3
Q ss_pred cccceEEEEECCC----CCEEEEEeC--------------------CCeEEEEeCC-CcceEEEeeeccCCEEEEEEcc-
Q 021459 21 HSRAVSCVKFSND----GTLLASASL--------------------DKTVIIWSAS-SLALVHRFVGHSEGISDLAWSS- 74 (312)
Q Consensus 21 h~~~v~~~~~s~~----~~~l~t~~~--------------------d~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~~~- 74 (312)
+...|..++|+|+ ++.+++++. |+.|++|++. +++.+..+.+|...+..++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 4456777778888 667766553 8899999984 4777788889999999999998
Q ss_pred --CCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc---ccEEEEEEecCCCEE------------EEeecCCcEEEEEcC
Q 021459 75 --DSHYICSASDDRTLRIWDARTPFDCLKTLRGHS---DFVFCVNFNPQSNLI------------VSGSFDESIRIWEVK 137 (312)
Q Consensus 75 --~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~s~~~dg~i~~wd~~ 137 (312)
++.+|++++.|++|++||+.++ ++++++.+|. ..+.+++|+|++.++ ++|+.|++|++||..
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TG-k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTG-QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTC-CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CCCCceEEEecCCCcEEEEECCCC-cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 6789999999999999999986 5677777643 357778999999876 567889999999999
Q ss_pred CCeEEEEee-----ecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec
Q 021459 138 TGKCTRVIR-----AHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 138 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
+++.+..+. +|...+.+..+ ++.++++++.|++|++||+.+++.+.++.++....+..++|+|+|++|++|+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 998876552 44444443333 47789999999999999999999998886665556666789999999999999
Q ss_pred CCeEEEEEc
Q 021459 213 DSTLKLWNY 221 (312)
Q Consensus 213 d~~i~v~d~ 221 (312)
|++|++||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999996
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.1e-31 Score=242.25 Aligned_cols=213 Identities=24% Similarity=0.374 Sum_probs=182.4
Q ss_pred eceeeecccccceEEEEECCC--CCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccC--CCeEEEEcCCC
Q 021459 13 RHFKTLTAHSRAVSCVKFSND--GTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSD--SHYICSASDDR 86 (312)
Q Consensus 13 ~~~~~~~~h~~~v~~~~~s~~--~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 86 (312)
....++.+|.++|++++|+|+ +++|++|+.||.|++|++.+++ .+..+.+|...|.+++|+|+ ++++++|+.||
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 455678899999999999988 9999999999999999998876 66777889999999999999 99999999999
Q ss_pred eEEEEeCCCCc-eeeeeeecccccEEEEEEec-------------CCCEEEEeecCCcEEEEEcCCC----eEEEEeeec
Q 021459 87 TLRIWDARTPF-DCLKTLRGHSDFVFCVNFNP-------------QSNLIVSGSFDESIRIWEVKTG----KCTRVIRAH 148 (312)
Q Consensus 87 ~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~dg~i~~wd~~~~----~~~~~~~~~ 148 (312)
.|++||+.+.. .....+.+|...|.+++|+| +++.+++++.||.|++||++++ .....+..|
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 99999997652 23445678999999999999 5899999999999999999876 455677789
Q ss_pred CcCeEEEEEccC---CCEEEEeeCCCeEEEEeCCCCcee--eEc--ccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEc
Q 021459 149 SMPVTSVHFNRD---GSLIVSGSHDGTCKIWDAGEGACL--KTL--IDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNY 221 (312)
Q Consensus 149 ~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 221 (312)
..+|.+++|+|+ ++++++++.||.|++||++++... ... ...+...+..++|+|+++++++++.||.|++||+
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 999999999999 899999999999999999876321 111 1224456777889999999999999999999998
Q ss_pred CCCc
Q 021459 222 SAGK 225 (312)
Q Consensus 222 ~~~~ 225 (312)
..+.
T Consensus 284 ~~~~ 287 (753)
T 3jro_A 284 NLEG 287 (753)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 7543
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=7.1e-29 Score=218.67 Aligned_cols=275 Identities=10% Similarity=0.148 Sum_probs=216.2
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC--CCCceeeeeeecc
Q 021459 29 KFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA--RTPFDCLKTLRGH 106 (312)
Q Consensus 29 ~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~--~~~~~~~~~~~~~ 106 (312)
.++|++.++++++.|+.|.+||..+++.+..+..+.. +..++|+|+|++|++++.|+.|.+||+ .+. +.+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC-cEEEEEec-
Confidence 4889999999999999999999999999888874333 889999999999999999999999999 553 55666653
Q ss_pred cccEEEEEEec----CCCEEEEeec-CCcEEEEEcCCCeEEEEeeec----------Cc-CeEEEEEccCCC-EEEEeeC
Q 021459 107 SDFVFCVNFNP----QSNLIVSGSF-DESIRIWEVKTGKCTRVIRAH----------SM-PVTSVHFNRDGS-LIVSGSH 169 (312)
Q Consensus 107 ~~~v~~~~~~~----~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~-~l~~~~~ 169 (312)
......++|+| +++++++++. +++|.+||..+++++..+..+ .. .+..+.++|++. ++++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45678999999 9999998885 899999999999888777542 22 678999999765 4566778
Q ss_pred CCeEEEEeCCCCceee--EcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcEEEEEEc----cCCceeEEEE
Q 021459 170 DGTCKIWDAGEGACLK--TLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKFLKIYTG----HTNKKYCITS 242 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~----~~~~~~~~~~ 242 (312)
++.|.+||..+.+.+. .+. .......+.|+|+|+++++++ .+++|.+||..+++.+..+.. |.... ..
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g--~~- 375 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG--AN- 375 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC--EE-
T ss_pred CCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC--cc-
Confidence 8999999998765433 221 233345577999999877654 588999999999998887764 32221 11
Q ss_pred EEEccCCcEEEEee-cCCeEEEEECCc-------hheeecccCCccceEEEEEcCCCceEEEeee---c--CCeeEEEEe
Q 021459 243 TFSVTNGKYIVSGS-EDNCVYVWDLQQ-------KTMIQKLDGHTDSVISVTCHPTENKIASAGL---D--GDRTVRVWV 309 (312)
Q Consensus 243 ~~~~~~~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~---d--gd~~v~iw~ 309 (312)
...+..+.+++++. .|++|.+||+.+ .+.++++.+|...+..+++||++++|.+++. | .+.+|.+|+
T Consensus 376 ~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 376 FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 12333367778775 689999999987 7888999999888999999999999998762 1 145999999
Q ss_pred ec
Q 021459 310 QD 311 (312)
Q Consensus 310 ~~ 311 (312)
.+
T Consensus 456 ~~ 457 (543)
T 1nir_A 456 LK 457 (543)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=5.9e-29 Score=228.08 Aligned_cols=286 Identities=12% Similarity=0.106 Sum_probs=214.5
Q ss_pred ccceEEEEECCCCCEEEEEeC-CC-----eEEEEeCCCcceEEEeeeccC------------------------CEEEEE
Q 021459 22 SRAVSCVKFSNDGTLLASASL-DK-----TVIIWSASSLALVHRFVGHSE------------------------GISDLA 71 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~-d~-----~i~vw~~~~~~~~~~~~~~~~------------------------~v~~~~ 71 (312)
...+.+++|||||++|++++. |+ .|++|+..+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 557999999999999999998 88 899999999887665554433 278999
Q ss_pred EccCCCeEEEEcCCCeEEEEeCCCCc-eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCc
Q 021459 72 WSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM 150 (312)
Q Consensus 72 ~~~~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~ 150 (312)
|+|||++|++++. +.|++||+.++. .....+..|...+.+++|+|||+.|++++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999876 999999997641 02445566778899999999999999887 46899999998876655443332
Q ss_pred C----------------eEEEEEccCCCEEEEeeCCC---------------------------------eEEEEeCCC-
Q 021459 151 P----------------VTSVHFNRDGSLIVSGSHDG---------------------------------TCKIWDAGE- 180 (312)
Q Consensus 151 ~----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iwd~~~- 180 (312)
. +..++|+|||++|+.++.|+ .|.+||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 47799999999999887765 788999987
Q ss_pred CceeeEccc-CCCCcEEEEEECCCCCEEEEEec-----CCeEEEEEcCCCcEEEEEEccCCcee-EEEEEEEccCCcEEE
Q 021459 181 GACLKTLID-DKDPAVSFAKFSPNGKFILVGTL-----DSTLKLWNYSAGKFLKIYTGHTNKKY-CITSTFSVTNGKYIV 253 (312)
Q Consensus 181 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 253 (312)
++....... .+...+..+.| |||++|+++.. +..|++||..+++....+..+..... .+....+.+++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 765433222 23455777889 99999997754 56899999999887766654432100 011122347788999
Q ss_pred EeecCCeEEEEECC-chheeecccCCccceEEE-EEcCCCceEEEeee-cCCeeEEEEeec
Q 021459 254 SGSEDNCVYVWDLQ-QKTMIQKLDGHTDSVISV-TCHPTENKIASAGL-DGDRTVRVWVQD 311 (312)
Q Consensus 254 ~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l-~~~p~~~~l~~~~~-dgd~~v~iw~~~ 311 (312)
+++.||.++||.+. ++. ...+..|...|..+ +|+|+++.++..+. |+..+++||.++
T Consensus 353 ~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 99999988888765 333 66777788888887 59999988765543 333488999874
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.5e-28 Score=210.32 Aligned_cols=265 Identities=12% Similarity=0.099 Sum_probs=201.8
Q ss_pred eeecccccceEEEEECC--------------CCCEEEEEeCC------CeEEEEeCCCcceEEEeeeccCCEEEEEEccC
Q 021459 16 KTLTAHSRAVSCVKFSN--------------DGTLLASASLD------KTVIIWSASSLALVHRFVGHSEGISDLAWSSD 75 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~--------------~~~~l~t~~~d------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~ 75 (312)
.++.+|...+..+++++ .+..++.++.+ +.|++||.... ....+.+|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCC
Confidence 34666777676666654 15566665554 79999999754 45677889999999999999
Q ss_pred CCeEEEEcCCC---eEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEE-EeecCCc--EEEEEcCCCeEEEEeeecC
Q 021459 76 SHYICSASDDR---TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV-SGSFDES--IRIWEVKTGKCTRVIRAHS 149 (312)
Q Consensus 76 ~~~l~~~~~d~---~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~--i~~wd~~~~~~~~~~~~~~ 149 (312)
|++|++++.++ .|++||+.++.. ..+..|...+.+++|+||++.|+ +++.++. |++||+.+++. ..+..|.
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~ 266 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGR 266 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCC
Confidence 99999998875 999999987532 34666788899999999999877 6666654 99999998875 4566677
Q ss_pred cCeEEEEEccCCCEEEEeeC-CC--eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecC---CeEEEEEcCC
Q 021459 150 MPVTSVHFNRDGSLIVSGSH-DG--TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLD---STLKLWNYSA 223 (312)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~ 223 (312)
..+.+++|+|+|++|+.++. ++ .|.+||+.+++.. .+. .....+..+.|+|+|++|++++.+ ..|++||+.+
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 88999999999999888776 44 6778898877643 222 233456678899999999988764 5899999988
Q ss_pred CcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC---eEEEEECCchheeecccCCccceEEEEEcCCCc
Q 021459 224 GKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN---CVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN 292 (312)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~ 292 (312)
++... +..+. . +....+.+++++|++++.++ .|.+||+. +.....+.+|.+.|.+++|+|...
T Consensus 345 ~~~~~-l~~~~-~---~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 345 GGVQV-LSSTF-L---DETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCEEE-CCCSS-S---CEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCEEE-ecCCC-C---cCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 87643 33332 2 22234457899998888777 89999987 445678888999999999999754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.2e-28 Score=210.95 Aligned_cols=278 Identities=13% Similarity=0.138 Sum_probs=208.2
Q ss_pred cceEEEEECCCCC-EEEEEe----CCC----eEEEEeC--CCcceE--EEeeeccCCEEEEEEcc--------------C
Q 021459 23 RAVSCVKFSNDGT-LLASAS----LDK----TVIIWSA--SSLALV--HRFVGHSEGISDLAWSS--------------D 75 (312)
Q Consensus 23 ~~v~~~~~s~~~~-~l~t~~----~d~----~i~vw~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~ 75 (312)
..+....|.+.+. ++++|+ .+| .+++||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4667778888775 566776 467 8999999 888876 45788888887777764 1
Q ss_pred CCeEEEEcCC------CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCC---cEEEEEcCCCeEEEEee
Q 021459 76 SHYICSASDD------RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE---SIRIWEVKTGKCTRVIR 146 (312)
Q Consensus 76 ~~~l~~~~~d------~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~ 146 (312)
+..++.++.+ +.|++||+... ....+.+|...+.+++|+|+++.+++++.++ .|++||+.+++.. .+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~--~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY--NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC--SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC--CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 5566655544 79999998753 3566777889999999999999999999875 8999999998765 455
Q ss_pred ecCcCeEEEEEccCCCEEE-EeeCCCe--EEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec-CC--eEEEEE
Q 021459 147 AHSMPVTSVHFNRDGSLIV-SGSHDGT--CKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL-DS--TLKLWN 220 (312)
Q Consensus 147 ~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~v~d 220 (312)
.|...+.+++|+|||+.|+ +++.++. |.+||+.+++. ..+. .+...+..+.|+|+|++|++++. ++ .|++||
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 6777899999999999887 6666554 99999988765 3333 34456778899999999998876 44 688889
Q ss_pred cCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC---CeEEEEECCchheeecccCCccceEEEEEcCCCceEEEe
Q 021459 221 YSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED---NCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASA 297 (312)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~ 297 (312)
+.+++... +..+... +....+.+++++|++++.+ +.|.+||+.+++. ..+..+. .+.+++|+|+++.|+++
T Consensus 298 ~~~~~~~~-l~~~~~~---~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 298 INGGAPQR-ITWEGSQ---NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp TTSSCCEE-CCCSSSE---EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEE
T ss_pred CCCCCEEE-EecCCCc---ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEE
Confidence 88776432 2223222 2233445789998887764 6899999987765 3455554 89999999999999998
Q ss_pred eecCC-eeEEEEeec
Q 021459 298 GLDGD-RTVRVWVQD 311 (312)
Q Consensus 298 ~~dgd-~~v~iw~~~ 311 (312)
+.|+. ..|++|+.+
T Consensus 372 s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEETTEEEEEEEETT
T ss_pred EcCCCccEEEEEECC
Confidence 87653 367777653
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.9e-27 Score=208.42 Aligned_cols=278 Identities=12% Similarity=0.088 Sum_probs=214.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeC--CCcceEEEeeeccCCEEEEEEcc----CCCeEEEEcC-CCeEEEEeCCCCc
Q 021459 25 VSCVKFSNDGTLLASASLDKTVIIWSA--SSLALVHRFVGHSEGISDLAWSS----DSHYICSASD-DRTLRIWDARTPF 97 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d~~i~vw~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~~wd~~~~~ 97 (312)
+..++|+|+|++|++++.|+.|++||+ .+++.+..+. +...+..++|+| +|++|++++. +++|.+||..+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~- 258 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL- 258 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-
Confidence 889999999999999999999999999 7888877776 455689999999 9999998874 899999998874
Q ss_pred eeeeeeec----------ccc-cEEEEEEecCCCE-EEEeecCCcEEEEEcCCCeEEE--EeeecCcCeEEEEEccCCCE
Q 021459 98 DCLKTLRG----------HSD-FVFCVNFNPQSNL-IVSGSFDESIRIWEVKTGKCTR--VIRAHSMPVTSVHFNRDGSL 163 (312)
Q Consensus 98 ~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 163 (312)
+.++.+.. |.+ .+..+.++|++.. +++...++.|.+||+.+.+.+. .+ .+...+..+.|+|+|++
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCE
Confidence 44555443 222 6888999997765 5666778999999998765443 33 34556788999999998
Q ss_pred EEEe-eCCCeEEEEeCCCCceeeEcccC---CC-CcEEEEEECCC-CCEEEEEe-cCCeEEEEEcCC-------CcEEEE
Q 021459 164 IVSG-SHDGTCKIWDAGEGACLKTLIDD---KD-PAVSFAKFSPN-GKFILVGT-LDSTLKLWNYSA-------GKFLKI 229 (312)
Q Consensus 164 l~~~-~~d~~i~iwd~~~~~~~~~~~~~---~~-~~~~~~~~~~~-~~~l~~~~-~d~~i~v~d~~~-------~~~~~~ 229 (312)
++++ ..+++|.+||..++++...+... +. .... . ++|+ +..++++. .|++|.+||..+ .+.++.
T Consensus 338 l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~-~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN-F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc-c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 7655 45889999999999887766432 11 1222 2 4676 55566654 579999999988 788888
Q ss_pred EEccCCceeEEEEEEEccCCcEEEEee-------cCCeEEEEECCchhee-ecc--------cCCccceEEEEEcCCCce
Q 021459 230 YTGHTNKKYCITSTFSVTNGKYIVSGS-------EDNCVYVWDLQQKTMI-QKL--------DGHTDSVISVTCHPTENK 293 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~-~~~--------~~h~~~v~~l~~~p~~~~ 293 (312)
+..+......+. ..+++++|.+++ .++.|.+||+.+.+.. ..+ ..+...+..++|+|+|+.
T Consensus 416 l~~~g~~~~~v~---~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~ 492 (543)
T 1nir_A 416 LQGQGGGSLFIK---THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE 492 (543)
T ss_dssp EECSCSCCCCEE---CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSE
T ss_pred EEcCCCCceEEE---cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCE
Confidence 888765543332 358899999987 3789999999987765 332 456788999999999999
Q ss_pred EEEeee---cCCeeEEEEee
Q 021459 294 IASAGL---DGDRTVRVWVQ 310 (312)
Q Consensus 294 l~~~~~---dgd~~v~iw~~ 310 (312)
+.++.. +.+.+|.|||.
T Consensus 493 ~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 493 VWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp EEEEEECCTTSCCEEEEEET
T ss_pred EEEEeecCCCCCCeEEEEEC
Confidence 887754 34689999986
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=9.3e-26 Score=188.70 Aligned_cols=272 Identities=11% Similarity=0.054 Sum_probs=208.9
Q ss_pred cccceEEEEECCCCCEEEEEeC-------CCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEEe
Q 021459 21 HSRAVSCVKFSNDGTLLASASL-------DKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIWD 92 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~-------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd 92 (312)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++ +...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4567889999999998888764 56899999999988777764 34577899999998555 455679999999
Q ss_pred CCCCceeeeeeecccc---------cEEEEEEecCCCEEEEee--cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCC
Q 021459 93 ARTPFDCLKTLRGHSD---------FVFCVNFNPQSNLIVSGS--FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDG 161 (312)
Q Consensus 93 ~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
..+.. .+..+..+.. ...++.|+|+++.+++++ .++.|.+||+.+++....+..+...+..++|+|++
T Consensus 118 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGE-VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCC-EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCCe-eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 98753 3444443321 267899999999877766 47889999999999887776555667889999999
Q ss_pred CEEEEeeCCCeEEEEeCCCCceeeEcccC---CCCcEEEEEECCCCCEEEEEec-CCeEEEEEcCCCcEEEEEEccCCce
Q 021459 162 SLIVSGSHDGTCKIWDAGEGACLKTLIDD---KDPAVSFAKFSPNGKFILVGTL-DSTLKLWNYSAGKFLKIYTGHTNKK 237 (312)
Q Consensus 162 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~ 237 (312)
+.+++++.++.+.+||+.+++....+... .......+.++|++++++++.. ++.|.+||..+++.+..+.....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 274 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-- 274 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--
Confidence 99999999999999999998877655431 2334566789999998777655 48999999999988777765432
Q ss_pred eEEEEEEEccCCcE-EEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeec
Q 021459 238 YCITSTFSVTNGKY-IVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLD 300 (312)
Q Consensus 238 ~~~~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~d 300 (312)
. ...+. ++++. +++...++.|.+||+.+++.+..+... ..+.+++|+|++++|+++..+
T Consensus 275 ~--~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 L--AVLFN-PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp C--CEEEE-TTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred c--eEEEC-CCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 1 22333 56764 555557999999999988877776643 467999999999977776654
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.7e-26 Score=192.23 Aligned_cols=271 Identities=10% Similarity=0.195 Sum_probs=185.3
Q ss_pred EEEEEeCCCeEEEEeCC-Ccce-EEEeeeccCCEEEEEEccCCCeEEEEcCC-CeEEEEeCC--CCc-eeeeeeeccccc
Q 021459 36 LLASASLDKTVIIWSAS-SLAL-VHRFVGHSEGISDLAWSSDSHYICSASDD-RTLRIWDAR--TPF-DCLKTLRGHSDF 109 (312)
Q Consensus 36 ~l~t~~~d~~i~vw~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~~wd~~--~~~-~~~~~~~~~~~~ 109 (312)
++++++.++.|++|++. +++. ......+...+..++|+|++++|++++.+ +.|.+|++. ++. ..+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 34455789999999985 2321 22234577788999999999988888776 899999986 322 2333444333 6
Q ss_pred EEEEEEecCCCEEEEeec-CCcEEEEEcCCC---eEEEEeeecCcCeEEEEEccCCCEEEEee-CCCeEEEEeCCC-Cce
Q 021459 110 VFCVNFNPQSNLIVSGSF-DESIRIWEVKTG---KCTRVIRAHSMPVTSVHFNRDGSLIVSGS-HDGTCKIWDAGE-GAC 183 (312)
Q Consensus 110 v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~ 183 (312)
+..++|+|+++.+++++. ++.|.+||+..+ +....+.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 788999999998876665 788999999433 33333333 33578899999999888777 889999999987 543
Q ss_pred ee----EcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCC--CcE--EEEEEccC----CceeEEEEEEEccCCc
Q 021459 184 LK----TLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSA--GKF--LKIYTGHT----NKKYCITSTFSVTNGK 250 (312)
Q Consensus 184 ~~----~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~--~~~--~~~~~~~~----~~~~~~~~~~~~~~~~ 250 (312)
.. ............+.|+|+++++++++ .++.|++||+.. ++. ........ ......... ..++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~s~dg~ 243 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH-ITPDGR 243 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE-ECTTSS
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE-ECCCCC
Confidence 22 22222334566788999999776654 789999999953 432 22222111 111222233 346777
Q ss_pred EEE-EeecCCeEEEEECC----chheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 251 YIV-SGSEDNCVYVWDLQ----QKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 251 ~l~-~~~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+|+ ++..++.|.+||+. ..+.+..+..+.. +..++|+|++++|++++. +++.|.+|++|
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d 307 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ-KSHHISVYEIV 307 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECT-TTCEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecC-CCCeEEEEEEc
Confidence 665 56689999999997 2344444554444 889999999998887764 35799999765
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=5.9e-26 Score=188.40 Aligned_cols=276 Identities=12% Similarity=0.183 Sum_probs=195.1
Q ss_pred EEECCCCCE-EEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcC-CCeEEEEeCCCCceeeeeeec
Q 021459 28 VKFSNDGTL-LASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASD-DRTLRIWDARTPFDCLKTLRG 105 (312)
Q Consensus 28 ~~~s~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~~~~~~~~~~ 105 (312)
..|.+++++ +++++.++.|++||..+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+.......+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 346665554 6778889999999999998887777666667 9999999997666655 889999999875432445555
Q ss_pred ccccEEEEEEecCCCEEEEeecCC---cEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEE-eeCCCe-EEEEeCCC
Q 021459 106 HSDFVFCVNFNPQSNLIVSGSFDE---SIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVS-GSHDGT-CKIWDAGE 180 (312)
Q Consensus 106 ~~~~v~~~~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~-i~iwd~~~ 180 (312)
+.....+++|+|++++++++..++ .|.+||+.+++.+..+..+ .....++|+|+|+++++ ...++. +.+|++..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 555555599999999998665553 8999999999887776544 34689999999985554 455578 99999875
Q ss_pred Ccee----eEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcE---EEEEEccCCceeEEEEEEEccCCcEE
Q 021459 181 GACL----KTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKF---LKIYTGHTNKKYCITSTFSVTNGKYI 252 (312)
Q Consensus 181 ~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
...+ .... ........+.|+|+|++++++ ..++.|++||+.+++. +..+...... ..+ ...++++++
T Consensus 161 ~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~-~~~---~~spdg~~l 235 (331)
T 3u4y_A 161 DGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP-GTI---VVSRDGSTV 235 (331)
T ss_dssp TCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC-CCE---EECTTSSEE
T ss_pred CCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC-ceE---EECCCCCEE
Confidence 4322 1111 223346778899999966555 4689999999998887 6666543222 222 234778865
Q ss_pred E-EeecCCeEEEEECCchhe--eecccCC----cc---ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 253 V-SGSEDNCVYVWDLQQKTM--IQKLDGH----TD---SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 253 ~-~~~~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+ +...++.|.+||+.+++. +..+..+ .. ....++|+|++++|++++.+ +++|++|+++
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~d~~ 303 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI-SRELKVFTIS 303 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT-TTEEEEEETT
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC-CCcEEEEEec
Confidence 4 445688999999987765 3222211 22 23568999999998877654 4689999974
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=1.8e-27 Score=217.62 Aligned_cols=286 Identities=12% Similarity=0.085 Sum_probs=202.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccC---CEEEEEEccCCCeEEEEcCC---------CeEEEE
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSE---GISDLAWSSDSHYICSASDD---------RTLRIW 91 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~v~~w 91 (312)
.+.+++|+|||+++++ +.||.|++||..+++....+..|.. .|.+++|+|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4677899999998876 7899999999999887776666654 49999999999999998764 788899
Q ss_pred eCCCCce-eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCe------------------
Q 021459 92 DARTPFD-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPV------------------ 152 (312)
Q Consensus 92 d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v------------------ 152 (312)
|+.++.. .+....+|...+..++|+|||+.|++++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9987532 12222344455788999999999998876 789999999887766554433333
Q ss_pred EEEEEccCCCEEEEeeCCC----------------------------------eEEEEeCCCCceeeEcccC-----CCC
Q 021459 153 TSVHFNRDGSLIVSGSHDG----------------------------------TCKIWDAGEGACLKTLIDD-----KDP 193 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~~d~----------------------------------~i~iwd~~~~~~~~~~~~~-----~~~ 193 (312)
..++|+|||+.|+.++.++ .|.+||+.+++....+... ...
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999999999887543 7899999887754444322 134
Q ss_pred cEEEEEECCCCCEEEEEec----CCeEEEEEcCCCcEEEEEEccCCc-eeEE-EEEEEccCCcEEEE--eecCC------
Q 021459 194 AVSFAKFSPNGKFILVGTL----DSTLKLWNYSAGKFLKIYTGHTNK-KYCI-TSTFSVTNGKYIVS--GSEDN------ 259 (312)
Q Consensus 194 ~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~--~~~dg------ 259 (312)
.+..+.|+|||+++++... +..|++||+.+++....+..+... .... ....+.++|+.|+. ...+|
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 5677899999998877643 357999999998876665433211 1100 01223467876654 45677
Q ss_pred eEEEEE-CCchh--eeecccCCccceEE-EEEcCCCceEEEeeecC-CeeEEEEeec
Q 021459 260 CVYVWD-LQQKT--MIQKLDGHTDSVIS-VTCHPTENKIASAGLDG-DRTVRVWVQD 311 (312)
Q Consensus 260 ~i~iwd-~~~~~--~~~~~~~h~~~v~~-l~~~p~~~~l~~~~~dg-d~~v~iw~~~ 311 (312)
.|.+|| ...+. ....+..+...+.. ++|+|+++.|+..+.++ ..+++||.++
T Consensus 336 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 577777 33333 14455543444554 69999999998776542 2678999874
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=1e-26 Score=189.31 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=185.1
Q ss_pred EEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC-Cceeeeeeecc-cccEEEEEEe
Q 021459 39 SASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART-PFDCLKTLRGH-SDFVFCVNFN 116 (312)
Q Consensus 39 t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~-~~~~~~~~~~~-~~~v~~~~~~ 116 (312)
+++.++.|++|+..+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ .. .......+ ...+.+++|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-PEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-CEECCCTTCCCBCSCCEEC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-ceEeccccccccccceEEC
Confidence 4567899999999987765 5666889999999999999999886 78999999987 43 33333444 3678889999
Q ss_pred cCCCEEEEee--cCCcEEEE--EcCCCeEEEEeeecCcCeEEEEEccCCCEEE-EeeCCCeEEEEeCC--CCceeeEccc
Q 021459 117 PQSNLIVSGS--FDESIRIW--EVKTGKCTRVIRAHSMPVTSVHFNRDGSLIV-SGSHDGTCKIWDAG--EGACLKTLID 189 (312)
Q Consensus 117 ~~~~~l~s~~--~dg~i~~w--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~--~~~~~~~~~~ 189 (312)
|+++.+++++ .++...+| ++.+++ ...+..+ ..+..++|+|+++.++ ++..++.+++|++. ++. ...+ .
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~-~ 169 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRL-T 169 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEEC-C
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEc-c
Confidence 9999999988 33455555 445444 3333333 3588899999999877 78889999999853 333 2333 2
Q ss_pred CCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcC-CCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC---------
Q 021459 190 DKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYS-AGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED--------- 258 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------- 258 (312)
.....+..+.|+|++++|++++ .++.+++|++. .+.....+..+.. .+......+++++|++++.+
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 3345677889999999888766 58899999886 4444555444432 23333445789988887765
Q ss_pred --CeEEEEECCchhe--eecccCCccceEEEEEcCCCceEEEeeecC
Q 021459 259 --NCVYVWDLQQKTM--IQKLDGHTDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 259 --g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
+.|.+||+.+++. +..+.+|...+.+++|+|+++.|++++.|.
T Consensus 247 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5799999987654 334447788899999999999999988764
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=2.8e-25 Score=202.63 Aligned_cols=280 Identities=14% Similarity=0.149 Sum_probs=199.5
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC-----Cc
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDART-----PF 97 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~-----~~ 97 (312)
..|.+++|||| +.++.+ .++.+++||..+++.. .+..+...+.+++|+|||++|+++ .++.|++||+.+ +.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 57999999999 655555 3599999999887654 445567778899999999999985 689999999976 43
Q ss_pred eeeeeeeccccc--------------EEEEEEecCCCEEEEee---------------------------------cCCc
Q 021459 98 DCLKTLRGHSDF--------------VFCVNFNPQSNLIVSGS---------------------------------FDES 130 (312)
Q Consensus 98 ~~~~~~~~~~~~--------------v~~~~~~~~~~~l~s~~---------------------------------~dg~ 130 (312)
. ......+... +.++.|+||++.|++++ .+..
T Consensus 158 ~-~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 A-IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp C-EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred c-EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 2 2222222222 47899999999999887 3467
Q ss_pred EEEEEcCCCeEEEEee--ecCcCeEEEEEccCCCEEEEeeCCC-----eEEEEeCCCCceeeEccc-CCCC---cEEEEE
Q 021459 131 IRIWEVKTGKCTRVIR--AHSMPVTSVHFNRDGSLIVSGSHDG-----TCKIWDAGEGACLKTLID-DKDP---AVSFAK 199 (312)
Q Consensus 131 i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~-~~~~---~~~~~~ 199 (312)
|++||+.+++...... .|...+..++|+|||+.+++++.++ .|.+||+.+++....+.. .... .+..+.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 9999999887655432 3556789999999999999887775 899999998833333321 1111 123457
Q ss_pred ECC--CCCEEEEEecCCeEEEEEcC-CCcEEEEEEccCCceeEEEEEEEccCCcEEE-EeecCC----eEEEEECCchhe
Q 021459 200 FSP--NGKFILVGTLDSTLKLWNYS-AGKFLKIYTGHTNKKYCITSTFSVTNGKYIV-SGSEDN----CVYVWDLQQKTM 271 (312)
Q Consensus 200 ~~~--~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg----~i~iwd~~~~~~ 271 (312)
|+| +|++++++..++.+++|++. ++..+..+..+..... ......++++.|+ +++.++ .|..||+.++.
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~--~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~- 393 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT--NFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK- 393 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE--EEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE--eeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-
Confidence 999 99999999899999999876 5666666655443322 2123446777665 455555 67777876654
Q ss_pred eecccCCccceEEEEEcCCCceEEEeeecCC--eeEEEEeec
Q 021459 272 IQKLDGHTDSVISVTCHPTENKIASAGLDGD--RTVRVWVQD 311 (312)
Q Consensus 272 ~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd--~~v~iw~~~ 311 (312)
...+. |...+.+++|+|++++++.+..+.. ..|++|+.+
T Consensus 394 ~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 394 TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 33443 6677899999999999887755433 568899763
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4.2e-25 Score=202.55 Aligned_cols=278 Identities=9% Similarity=0.050 Sum_probs=199.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeee
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLK 101 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~ 101 (312)
.|.+++|||||++|++++. +.|++|++.++. ....+..|...+..++|+|||++|++++ ++.|++||+.++. ...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EEE
Confidence 4789999999999999887 899999998872 3345667888899999999999999887 5699999998753 222
Q ss_pred eeeccccc----------------EEEEEEecCCCEEEEeecCC---------------------------------cEE
Q 021459 102 TLRGHSDF----------------VFCVNFNPQSNLIVSGSFDE---------------------------------SIR 132 (312)
Q Consensus 102 ~~~~~~~~----------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~ 132 (312)
....+... +..++|+||++.|++++.|+ .|.
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 22222221 36799999999999887765 788
Q ss_pred EEEcCC-CeEEEEee--ecCcCeEEEEEccCCCEEEEeeC-----CCeEEEEeCCCCceeeEcccCCCC---cEEEEEEC
Q 021459 133 IWEVKT-GKCTRVIR--AHSMPVTSVHFNRDGSLIVSGSH-----DGTCKIWDAGEGACLKTLIDDKDP---AVSFAKFS 201 (312)
Q Consensus 133 ~wd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~ 201 (312)
+||+.+ ++...... .|...+..++| |||+.|+.++. +..|.+||+.+++....+...... .+..+.|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999988 77554432 36677899999 99999987654 567999999988765443322221 22356799
Q ss_pred CCCCEEEEEecCCeEEEEEcC-CCcEEEEEEccCCceeEEEEEEEccCCcEE-EEeecCC--eEEEEECCc-hheeeccc
Q 021459 202 PNGKFILVGTLDSTLKLWNYS-AGKFLKIYTGHTNKKYCITSTFSVTNGKYI-VSGSEDN--CVYVWDLQQ-KTMIQKLD 276 (312)
Q Consensus 202 ~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg--~i~iwd~~~-~~~~~~~~ 276 (312)
|+|+++++++.++.+++|.+. ++. ...+..+..... ......++++.| ++++.++ .+++|++.. +.....+.
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVD--ELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEE--EEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEE--eEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 999988888889988888765 344 555554443322 222234677765 4566666 899998753 44455555
Q ss_pred CCccceEEEEEcCCCceEEEeeecCC--eeEEEEe
Q 021459 277 GHTDSVISVTCHPTENKIASAGLDGD--RTVRVWV 309 (312)
Q Consensus 277 ~h~~~v~~l~~~p~~~~l~~~~~dgd--~~v~iw~ 309 (312)
. ...+..++|+|++++|+....+.+ ..+.+|+
T Consensus 423 ~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 423 K-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp C-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred c-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 4 567889999999999887765433 3455554
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=3.4e-25 Score=202.12 Aligned_cols=277 Identities=10% Similarity=0.128 Sum_probs=191.9
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE-EEeeecc-----------------CCEEEEEEccCCCeEEEEcCCC
Q 021459 25 VSCVKFSNDGTLLASASLDKTVIIWSASSLALV-HRFVGHS-----------------EGISDLAWSSDSHYICSASDDR 86 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~d~ 86 (312)
+..+.|. ++.+++++.++ | +||..+++.+ ..+..+. ..|.+++|+|+ ..++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4557787 66777777787 8 9999988773 4444443 46999999999 555555 359
Q ss_pred eEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC-----CeEEEEeeecCcC----------
Q 021459 87 TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT-----GKCTRVIRAHSMP---------- 151 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-----~~~~~~~~~~~~~---------- 151 (312)
.+++||+.++ + ...+..+...+.+++|+||++.++++ .++.|++||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~-~-~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 102 GLVGFDMLAR-K-VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp EEEEEETTTT-E-EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred EEEEEECCCC-c-eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 9999999875 3 23344456678889999999999885 689999999998 7765544333332
Q ss_pred ----eEEEEEccCCCEEEEee---------------------------------CCCeEEEEeCCCCceeeEccc-CCCC
Q 021459 152 ----VTSVHFNRDGSLIVSGS---------------------------------HDGTCKIWDAGEGACLKTLID-DKDP 193 (312)
Q Consensus 152 ----v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iwd~~~~~~~~~~~~-~~~~ 193 (312)
+.++.|+|||++|++++ .+..|.+||+.+++....... .+..
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 258 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEK 258 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTC
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCce
Confidence 47899999999999887 446799999988765433322 2345
Q ss_pred cEEEEEECCCCCEEEEEecCC-----eEEEEEcCCCcEEEE-EEccCCc-eeEEEEEEEcc--CCcEEEEeecCCeEEEE
Q 021459 194 AVSFAKFSPNGKFILVGTLDS-----TLKLWNYSAGKFLKI-YTGHTNK-KYCITSTFSVT--NGKYIVSGSEDNCVYVW 264 (312)
Q Consensus 194 ~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~-~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~dg~i~iw 264 (312)
.+..+.|+|||+.|++++.++ .|++||..+++.... ....... ...+......+ +++++++++.||.+++|
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 577889999999999987775 899999998843333 3221111 00011122346 88899999999999999
Q ss_pred ECC-chheeecccCCccceEE-EEEcCCCceEEEeeecCC-eeEEEEee
Q 021459 265 DLQ-QKTMIQKLDGHTDSVIS-VTCHPTENKIASAGLDGD-RTVRVWVQ 310 (312)
Q Consensus 265 d~~-~~~~~~~~~~h~~~v~~-l~~~p~~~~l~~~~~dgd-~~v~iw~~ 310 (312)
++. ++.....+..|...+.. ++|+|+++.|+.++.+.. ..+.||.+
T Consensus 339 ~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp EEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred EEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 875 45566777777777877 799999998877765432 13444443
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.9e-24 Score=179.43 Aligned_cols=262 Identities=11% Similarity=0.089 Sum_probs=191.0
Q ss_pred CEEEEEeCCCeEEEEeCCCcceEEEeeeccC--CEEEEEEccCCCeE-EEEcCCCeEEEEeCCCCceeeeeeec-c----
Q 021459 35 TLLASASLDKTVIIWSASSLALVHRFVGHSE--GISDLAWSSDSHYI-CSASDDRTLRIWDARTPFDCLKTLRG-H---- 106 (312)
Q Consensus 35 ~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~~~~~~~~~-~---- 106 (312)
+++++++.++.|++||..+++.+..+..... .+..++|+|+++.+ +++..++.|.+||+.+.. .+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-TLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-EEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC-eEeeEEcCCcccc
Confidence 4788999999999999999888777653321 47889999999765 455667899999998753 3333331 1
Q ss_pred cccEEEEEEecCCCEEEEee------------cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 107 SDFVFCVNFNPQSNLIVSGS------------FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 107 ~~~v~~~~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
...+..++|+|+++.+++++ .++.|.+||+.+++....+.. ...+..++|+|++++++++ ++.+.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEE
Confidence 22566789999999988886 579999999999887766654 4457788999999988877 68899
Q ss_pred EEeCCCCceeeEcccCC-CCcEEEEEECCCCCEEEEEecCC------------------------eEEEEEcCCCcEEEE
Q 021459 175 IWDAGEGACLKTLIDDK-DPAVSFAKFSPNGKFILVGTLDS------------------------TLKLWNYSAGKFLKI 229 (312)
Q Consensus 175 iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~------------------------~i~v~d~~~~~~~~~ 229 (312)
+||+.+++....+.... .... .++|++..++..+..+ .|.+||..+++....
T Consensus 158 ~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEECCCCcEeeeeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 99999888765553322 1112 5788888765544322 468999988876421
Q ss_pred -EEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEE
Q 021459 230 -YTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVW 308 (312)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw 308 (312)
+..+...... ....+++++++++ ++.|.+||+.+++.+..+..+ ..+.+++|+|++++|++++. ++.|++|
T Consensus 235 ~~~~~~~~~~~---~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~--~~~i~v~ 306 (337)
T 1pby_B 235 EVRIMDVFYFS---TAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGA--LGDLAAY 306 (337)
T ss_dssp EEEECSSCEEE---EEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESB--SSEEEEE
T ss_pred ecCCCCCceee---EEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcC--CCcEEEE
Confidence 2222222222 2334788888877 799999999988777666533 45789999999999888764 5689999
Q ss_pred eec
Q 021459 309 VQD 311 (312)
Q Consensus 309 ~~~ 311 (312)
+..
T Consensus 307 d~~ 309 (337)
T 1pby_B 307 DAE 309 (337)
T ss_dssp ETT
T ss_pred ECc
Confidence 864
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=8.3e-25 Score=195.27 Aligned_cols=273 Identities=11% Similarity=0.037 Sum_probs=190.7
Q ss_pred cccceEEEEECCCCCEEEEEeC-CCeEEEEeCCCcceEEEeeecc-CCEEEEEEccCCCeEEEEcC---CCeEEEEeCCC
Q 021459 21 HSRAVSCVKFSNDGTLLASASL-DKTVIIWSASSLALVHRFVGHS-EGISDLAWSSDSHYICSASD---DRTLRIWDART 95 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~v~~wd~~~ 95 (312)
+..+|.+++|+|||+.||+++. ||+++||++.+++. ..+..|. ..+..++|+|| +++++++. +....+|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 4668999999999999999877 99999999865554 4455555 58999999999 77777765 45556654422
Q ss_pred --CceeeeeeecccccEEEEEEecCCCE-EEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCC--
Q 021459 96 --PFDCLKTLRGHSDFVFCVNFNPQSNL-IVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHD-- 170 (312)
Q Consensus 96 --~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 170 (312)
..... .+.... .....+|+|+++. +++.+.++.+.+||+.+++.......+. .+++|+|||++++.++.+
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC
Confidence 11111 222111 2335678888753 3444445556699999987665544333 789999999999988777
Q ss_pred --CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCC--eEEEEEcCCCcEEEEEEccCCceeEE-----E
Q 021459 171 --GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDS--TLKLWNYSAGKFLKIYTGHTNKKYCI-----T 241 (312)
Q Consensus 171 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~-----~ 241 (312)
+.|.+||+.+++.. .+ ..+...+...+|+|||++|+++..++ .|++||+.+++.. .+..+......+ .
T Consensus 173 ~~~~i~~~d~~~g~~~-~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp TEEEEEEEETTTCCCE-EE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCeEEEEEcCCCCCce-Ee-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 78999999877654 33 33445567889999999999888888 8999999988876 554443321111 1
Q ss_pred EEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 242 STFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
...+.+++.++++++.+|.+++|++ ++... ...+.+.+++|+ +++.+++++.+. ..-.+|.+
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~-~p~~l~~~ 311 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLS-TPPRIVSL 311 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETT-EEEEEEEE
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCC-CCCeEEEE
Confidence 1113477889999999999999999 44433 234678899999 988888887664 33344443
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2e-24 Score=204.78 Aligned_cols=286 Identities=17% Similarity=0.127 Sum_probs=211.4
Q ss_pred eeeecccccce-------EEEEECCCCCEEEEEeCC------CeEEEEeCCCcceE------------------------
Q 021459 15 FKTLTAHSRAV-------SCVKFSNDGTLLASASLD------KTVIIWSASSLALV------------------------ 57 (312)
Q Consensus 15 ~~~~~~h~~~v-------~~~~~s~~~~~l~t~~~d------~~i~vw~~~~~~~~------------------------ 57 (312)
.+.+..|...+ ..++|+|||+++++++.+ ..|.+|+..+++..
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 35677888888 999999999977777754 35777776544321
Q ss_pred -------------------------EEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEE
Q 021459 58 -------------------------HRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFC 112 (312)
Q Consensus 58 -------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~ 112 (312)
..+.+|...+.++.|+++ .++++++.++.+.+|.+.........+..|. .+..
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~ 249 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYP 249 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCE
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccce
Confidence 123456677888889888 6677778888889997643222334444454 3456
Q ss_pred EEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeee-----------cCcCeEEEEEc-cCCCEEEEeeCCCeEEEEeCCC
Q 021459 113 VNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRA-----------HSMPVTSVHFN-RDGSLIVSGSHDGTCKIWDAGE 180 (312)
Q Consensus 113 ~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~ 180 (312)
.+|+|+++.++++ .++.|++||+...+. ..+.. |...+..++|+ |+|+.++.++ ++.+.+|+...
T Consensus 250 ~~~SpDG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 250 RHLNTDGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEEESSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS
T ss_pred eeEcCCCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC
Confidence 7999999988887 488999999954443 34333 33468899999 9999998887 78999999887
Q ss_pred CceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEE-EEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC
Q 021459 181 GACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLK-LWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN 259 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 259 (312)
+.... +.......+..+.|+ +|+.|+.++.++.+. +||...++..... .+.... ......+++++|++++.++
T Consensus 327 ~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~---~~~~~SpDG~~la~~~~~~ 400 (1045)
T 1k32_A 327 TYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNV---FAMGVDRNGKFAVVANDRF 400 (1045)
T ss_dssp SBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSE---EEEEECTTSSEEEEEETTS
T ss_pred CceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CCccce---eeeEECCCCCEEEEECCCC
Confidence 66433 322222257778899 999999988888888 9998877654333 443332 2334458899999999999
Q ss_pred eEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecC--------CeeEEEEeec
Q 021459 260 CVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDG--------DRTVRVWVQD 311 (312)
Q Consensus 260 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dg--------d~~v~iw~~~ 311 (312)
.|++||+.+++....+.+|...+.+++|+|++++|++++.++ +.+|++|+.+
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 999999998877777778888999999999999999988754 4689999864
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.3e-24 Score=206.11 Aligned_cols=279 Identities=14% Similarity=0.111 Sum_probs=215.0
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCC-cceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASS-LALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
...+.+|...+.++.|+++ .++++++.++.+++|.... +.....+..|. .+..++|+|+|+.|+.+ .++.|.+||+
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~ 272 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNP 272 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECT
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecC
Confidence 3456789999999999998 6777888889999997543 33334444454 46678999999999887 4899999998
Q ss_pred CCCceeeeeeec-----------ccccEEEEEEe-cCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCc-CeEEEEEccC
Q 021459 94 RTPFDCLKTLRG-----------HSDFVFCVNFN-PQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM-PVTSVHFNRD 160 (312)
Q Consensus 94 ~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~ 160 (312)
... . +..+.+ |...+.+++|+ ||++.+++++ ++.|.+|++..++... +..|.. .+..++|+ +
T Consensus 273 ~~~-~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 273 DTE-K-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp TTC-C-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-S
T ss_pred Cce-E-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-C
Confidence 432 2 323333 34468899999 9999988887 7899999998876543 455666 78999999 9
Q ss_pred CCEEEEeeCCCeEE-EEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 161 GSLIVSGSHDGTCK-IWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 161 ~~~l~~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
|+.++.++.++.+. +||+..+... .+. .+...+..++|+|+|++|++++.++.|++||+.+++.......+......
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~-~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAE-KFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEE-ECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCeEEEEECCCceEEEEECCCCCce-Eec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 99999988888888 8998776543 333 44456788899999999999999999999999999887777666554333
Q ss_pred EEEEEEccCCcEEEEeecCC----------eEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 240 ITSTFSVTNGKYIVSGSEDN----------CVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~dg----------~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
+ .+.+++++|++++.++ .|++||+.+++ ...+..|...+..++|+|++++|++++.++ ..++|+
T Consensus 426 ~---~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~--~~~~~~ 499 (1045)
T 1k32_A 426 F---TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRS--LDPSPD 499 (1045)
T ss_dssp E---EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCC--CCCEEC
T ss_pred e---EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEeccc--CCcCcc
Confidence 3 3357899998887654 99999998776 667778888899999999999999888543 344443
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=3e-23 Score=173.33 Aligned_cols=268 Identities=16% Similarity=0.254 Sum_probs=179.0
Q ss_pred CCCeEEEEeC--CCcceEE-EeeeccCCEEEEEEccCCCeEEEEcC---CCeEEEEeCCCCc-eeeeeeecccccEEEEE
Q 021459 42 LDKTVIIWSA--SSLALVH-RFVGHSEGISDLAWSSDSHYICSASD---DRTLRIWDARTPF-DCLKTLRGHSDFVFCVN 114 (312)
Q Consensus 42 ~d~~i~vw~~--~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~ 114 (312)
.++.|.+|.+ .+++... ....+...+..++|+|+|+ |++++. ++.|.+|++.++. +.+.....+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 3456777754 4454432 3344566778899999999 555544 6899999986543 23334345666778899
Q ss_pred EecCCCEEEEee-cCCcEEEEEcCC-CeE--EEEeeec---------CcCeEEEEEccCCCEEEEeeCCCeEEEEeCC-C
Q 021459 115 FNPQSNLIVSGS-FDESIRIWEVKT-GKC--TRVIRAH---------SMPVTSVHFNRDGSLIVSGSHDGTCKIWDAG-E 180 (312)
Q Consensus 115 ~~~~~~~l~s~~-~dg~i~~wd~~~-~~~--~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~ 180 (312)
|+|++++|++++ .++.|.+||+.. +.. +..+... ...+.+++|+|+|+++++...++.|.+||+. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888887 678999999963 322 2222211 1237789999999977777778899999998 4
Q ss_pred Cceee--EcccCCCCcEEEEEECCCCCEEEE-EecCCeEEEEEcCC--CcEE--EEEEccCCc---eeEEEEEEEccCCc
Q 021459 181 GACLK--TLIDDKDPAVSFAKFSPNGKFILV-GTLDSTLKLWNYSA--GKFL--KIYTGHTNK---KYCITSTFSVTNGK 250 (312)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~--~~~~--~~~~~~~~~---~~~~~~~~~~~~~~ 250 (312)
++... .+..........++|+|+|+++++ ...++.|.+|++.. ++.. ..+...... ..........++++
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 43321 112222334566889999996666 45688999999874 4432 222222211 01222233457888
Q ss_pred EE-EEeecCCeEEEEECCch---heeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 251 YI-VSGSEDNCVYVWDLQQK---TMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 251 ~l-~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+| ++...++.|.+|++... +.+..+..+...+..++|+|++++|++++.+ +++|.+|.+|
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~d 316 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN-TDNATLYARD 316 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT-TTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC-CCcEEEEEEe
Confidence 76 56667899999999732 4445555666678999999999998887754 3689999764
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=3.6e-23 Score=172.09 Aligned_cols=268 Identities=12% Similarity=0.177 Sum_probs=179.5
Q ss_pred cccccceEEEEECCCCCEEEEEeCC-CeEEEEeCC--Ccc--eEEEeeeccCCEEEEEEccCCCeEEEEc-CCCeEEEEe
Q 021459 19 TAHSRAVSCVKFSNDGTLLASASLD-KTVIIWSAS--SLA--LVHRFVGHSEGISDLAWSSDSHYICSAS-DDRTLRIWD 92 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l~t~~~d-~~i~vw~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~wd 92 (312)
..|...+.+++|+|++++|++++.+ +.|++|++. +++ .+..+..+ ..+..++|+|++++|++++ .++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 3477789999999999998888876 999999987 444 33444433 3788999999999876665 488999999
Q ss_pred CCCC--ceeeeeeecccccEEEEEEecCCCEEEEee-cCCcEEEEEcCC-CeEEE----Eeee-cCcCeEEEEEccCCCE
Q 021459 93 ARTP--FDCLKTLRGHSDFVFCVNFNPQSNLIVSGS-FDESIRIWEVKT-GKCTR----VIRA-HSMPVTSVHFNRDGSL 163 (312)
Q Consensus 93 ~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~ 163 (312)
+..+ .........+ ..+.+++|+|+++.+++++ .++.|.+||+.+ ++... .... ....+..++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 8422 1233333333 4578899999999888777 889999999987 54432 2222 2346788999999997
Q ss_pred EEEe-eCCCeEEEEeCCC--Cce--eeEcc---cC--CCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcC--CCc--EEE
Q 021459 164 IVSG-SHDGTCKIWDAGE--GAC--LKTLI---DD--KDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYS--AGK--FLK 228 (312)
Q Consensus 164 l~~~-~~d~~i~iwd~~~--~~~--~~~~~---~~--~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~--~~~--~~~ 228 (312)
++++ ..++.+.+||+.. +.. ..... .. .......++|+|++++|+++ ..++.|++||+. ++. .+.
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 7555 4789999999853 332 11111 11 11235568899999988755 478999999997 332 333
Q ss_pred EEEccCCceeEEEEEEEccCCcEEEEee-cCCeEEEEEC--Cchh--eeecccCCccceEEEEEcCCCce
Q 021459 229 IYTGHTNKKYCITSTFSVTNGKYIVSGS-EDNCVYVWDL--QQKT--MIQKLDGHTDSVISVTCHPTENK 293 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~--~~~~--~~~~~~~h~~~v~~l~~~p~~~~ 293 (312)
.+..+.. ... ....+++++|++++ .++.|.+|++ .+++ .+..+.. .....+++|.|+.+.
T Consensus 272 ~~~~~~~-~~~---~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 272 FQPTETQ-PRG---FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEECSSS-CCC---EEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC--
T ss_pred eecCCCc-cce---EEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccCC
Confidence 3433322 222 22346788777766 6899999954 3442 3333433 234567778776543
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=5.1e-23 Score=170.68 Aligned_cols=270 Identities=11% Similarity=0.117 Sum_probs=180.4
Q ss_pred eeecccccceEEEEECCCCCEEEEEeC-CCeEEEEeCCCcce-EEEeeeccCCEEEEEEccCCCeEEEEcCCC---eEEE
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASL-DKTVIIWSASSLAL-VHRFVGHSEGISDLAWSSDSHYICSASDDR---TLRI 90 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~-d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~~ 90 (312)
..+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++|+++..++ .|.+
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 3344455666 9999999997666655 88999999998887 666666666655599999999999655553 8999
Q ss_pred EeCCCCceeeeeeecccccEEEEEEecCCCEEEEe-ecCCc-EEEEEcCCCeEEE----EeeecCcCeEEEEEccCCCEE
Q 021459 91 WDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSG-SFDES-IRIWEVKTGKCTR----VIRAHSMPVTSVHFNRDGSLI 164 (312)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~~wd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l 164 (312)
||+.+. +.+..+..+ ....+++|+|++++++++ ..++. |.+|++.....+. ...........++|+|+|+++
T Consensus 113 ~d~~~~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 113 YSFLKN-KFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EETTTT-EEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EECCCC-CeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 999875 444455433 346899999999865555 55588 9999987543321 111234557899999999965
Q ss_pred E-EeeCCCeEEEEeCCCCce---eeEcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcE--EEEEEcc----
Q 021459 165 V-SGSHDGTCKIWDAGEGAC---LKTLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKF--LKIYTGH---- 233 (312)
Q Consensus 165 ~-~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~--~~~~~~~---- 233 (312)
+ ++..++.|.+||+.+++. +..+... .....++|+|+|++++++. .++.|.+||..+++. +..+...
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC
Confidence 5 455688999999998876 5554332 3345678999999776654 577899999988876 3333322
Q ss_pred CCceeEEEEEEEccCCcEEE-EeecCCeEEEEECCchheeecccCCccceEEEEEcCCC
Q 021459 234 TNKKYCITSTFSVTNGKYIV-SGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTE 291 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~ 291 (312)
.............+++++|+ ++..++.|.+||+..... ..+.+....-....++|+.
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV-GYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE-EECTTCCCBSCEEECCCC-
T ss_pred CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc-cceecccccCCeEEECCcc
Confidence 11111101112346777765 555677999999976543 2333333322234456654
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.1e-24 Score=199.19 Aligned_cols=277 Identities=9% Similarity=0.036 Sum_probs=187.5
Q ss_pred eeccccc---ceEEEEECCCCCEEEEEeCC---------CeEEEEeCCCcceEEEee---eccCCEEEEEEccCCCeEEE
Q 021459 17 TLTAHSR---AVSCVKFSNDGTLLASASLD---------KTVIIWSASSLALVHRFV---GHSEGISDLAWSSDSHYICS 81 (312)
Q Consensus 17 ~~~~h~~---~v~~~~~s~~~~~l~t~~~d---------~~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~ 81 (312)
.+..|.. .|.+++|||||++|++++.+ +.+.+||+.+++. ..+. +|...+..++|+|||+.|++
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~ 130 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIF 130 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEE
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEE
Confidence 3445554 49999999999999998764 7888999998875 2332 34445889999999999999
Q ss_pred EcCCCeEEEEeCCCCceeeeeeeccccc------------------EEEEEEecCCCEEEEeecCC--------------
Q 021459 82 ASDDRTLRIWDARTPFDCLKTLRGHSDF------------------VFCVNFNPQSNLIVSGSFDE-------------- 129 (312)
Q Consensus 82 ~~~d~~v~~wd~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~s~~~dg-------------- 129 (312)
++. +.|++||+.++.. ......+... +.+++|+||++.|++++.++
T Consensus 131 ~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 875 7999999877532 2222222222 27899999999999887553
Q ss_pred --------------------cEEEEEcCCCeEEEEeeec------CcCeEEEEEccCCCEEEEeeC----CCeEEEEeCC
Q 021459 130 --------------------SIRIWEVKTGKCTRVIRAH------SMPVTSVHFNRDGSLIVSGSH----DGTCKIWDAG 179 (312)
Q Consensus 130 --------------------~i~~wd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~ 179 (312)
.|++||+.+++....+..+ ...+..++|+|||+++++... +..|.+||+.
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 7999999888754555443 456889999999998876643 3579999998
Q ss_pred CCceeeEcccCCCCcE----EEEEECCCCCEEEEE--ecCC------eEEEEE-cCCCcE--EEEEEccCCceeEEEEEE
Q 021459 180 EGACLKTLIDDKDPAV----SFAKFSPNGKFILVG--TLDS------TLKLWN-YSAGKF--LKIYTGHTNKKYCITSTF 244 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~--~~d~------~i~v~d-~~~~~~--~~~~~~~~~~~~~~~~~~ 244 (312)
+++............+ ....|+|||+.|+.. ..++ .|++|| ...+.. ...+...... ......
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~--~~~~~~ 366 (723)
T 1xfd_A 289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWD--VTKILA 366 (723)
T ss_dssp TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSC--EEEEEE
T ss_pred CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeE--EEeeeE
Confidence 8876544322221211 245799999977754 4566 566677 334330 2333222111 122223
Q ss_pred EccCCcEEEEeecC---CeEEEEECCchh--eeecccC---CccceEEEEEcCCCceEEEee
Q 021459 245 SVTNGKYIVSGSED---NCVYVWDLQQKT--MIQKLDG---HTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 245 ~~~~~~~l~~~~~d---g~i~iwd~~~~~--~~~~~~~---h~~~v~~l~~~p~~~~l~~~~ 298 (312)
+.++++.|+..+.+ +.+++|++.... ....+.. |...+..++|+|++++|+...
T Consensus 367 ~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 367 YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 44778888655444 889999986432 3334443 567788999999999887653
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.6e-24 Score=186.08 Aligned_cols=202 Identities=19% Similarity=0.165 Sum_probs=156.2
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCc----------ceEE-----EeeeccCCEEEEEEccCCCeEE----E
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSL----------ALVH-----RFVGHSEGISDLAWSSDSHYIC----S 81 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~----------~~~~-----~~~~~~~~v~~~~~~~~~~~l~----~ 81 (312)
+...++.+++++++.++++++.++ +++|+.... ..+. ....+...|.+++|+|++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 445688999999999999999988 888764321 0111 1123566799999999999999 7
Q ss_pred EcCCCeEEEEeCCCC-----c-----eeeeeeecccccEEEEEEecC-CCEEEEeecCCcEEEEEcCCCeEEEEeeecCc
Q 021459 82 ASDDRTLRIWDARTP-----F-----DCLKTLRGHSDFVFCVNFNPQ-SNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM 150 (312)
Q Consensus 82 ~~~d~~v~~wd~~~~-----~-----~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~ 150 (312)
++.|+.|++||+.+. . .....+.+|...|.+++|+|+ +++|++++.||+|++||+++++.......|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 889999999997542 0 124556779999999999998 78999999999999999999877666667888
Q ss_pred CeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccC------CCCcEEEEEECCCCCEEEEE-ecCC------eEE
Q 021459 151 PVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDD------KDPAVSFAKFSPNGKFILVG-TLDS------TLK 217 (312)
Q Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-~~d~------~i~ 217 (312)
.+.+++|+|+|++|++|+.||.|++||.+ ++....+... +...+..+.|++++.++++. ..+| .++
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 99999999999999999999999999998 4433333221 11257778899988777553 3343 389
Q ss_pred EEEcCCC
Q 021459 218 LWNYSAG 224 (312)
Q Consensus 218 v~d~~~~ 224 (312)
+||++..
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999754
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=4.7e-24 Score=173.51 Aligned_cols=235 Identities=14% Similarity=0.183 Sum_probs=170.0
Q ss_pred eeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCC-cceEEEeeec-cCCEEEEEEccCCCeEEEEc--CCCeEEEE
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASS-LALVHRFVGH-SEGISDLAWSSDSHYICSAS--DDRTLRIW 91 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~v~~w 91 (312)
..+..|...|.+++|+|++++|++++ ++.|++|+..+ ++.......+ ...+.+++|+|++++|++++ .++...+|
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 34567899999999999999999987 78999999998 7776555555 36788999999999999988 33445555
Q ss_pred --eCCCCceeeeeeecccccEEEEEEecCCCEEE-EeecCCcEEEEEcC--CCeEEEEeeecCcCeEEEEEccCCCEEEE
Q 021459 92 --DARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV-SGSFDESIRIWEVK--TGKCTRVIRAHSMPVTSVHFNRDGSLIVS 166 (312)
Q Consensus 92 --d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
+..+. ....+..+ ..+.+++|+|+++.++ +++.++.+++|++. +++ ...+..+...+.++.|+|+++.++.
T Consensus 114 ~~~~~~~--~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 114 LLPSTGG--TPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEETTCC--CCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTSSEEEE
T ss_pred EEECCCC--ceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCCCEEEE
Confidence 44443 23334333 3488899999999877 77889999999863 343 3455567778999999999998876
Q ss_pred ee-CCCeEEEEeCC-CCceeeEcccCCCCcEEEEEECCCCCEEEEEecC-----------CeEEEEEcCCCcEEEEE--E
Q 021459 167 GS-HDGTCKIWDAG-EGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLD-----------STLKLWNYSAGKFLKIY--T 231 (312)
Q Consensus 167 ~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------~~i~v~d~~~~~~~~~~--~ 231 (312)
++ .++.+++|++. .+.....+. .+...+..+.|+|++++|++++.+ +.|++||+.+++..... .
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE
T ss_pred EecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC
Confidence 66 58899999875 344444443 334456778899999999988765 56999999887654433 2
Q ss_pred ccCCceeEEEEEEEccCCcEEEEeecCC
Q 021459 232 GHTNKKYCITSTFSVTNGKYIVSGSEDN 259 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg 259 (312)
.+......+ .+.++++.|++++.+.
T Consensus 269 ~~~~~~~~~---~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 GGQGTMNSP---NWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ESTTTSCSC---CBCTTSSEEEEEEECC
T ss_pred CCCcccccc---eECCCCCEEEEEEecc
Confidence 444332222 2347788887776553
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=1.2e-22 Score=172.09 Aligned_cols=292 Identities=12% Similarity=0.106 Sum_probs=194.8
Q ss_pred ceeeecccccceEE-----EEECCCCCEEEEEeC-CC--eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC
Q 021459 14 HFKTLTAHSRAVSC-----VKFSNDGTLLASASL-DK--TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD 85 (312)
Q Consensus 14 ~~~~~~~h~~~v~~-----~~~s~~~~~l~t~~~-d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 85 (312)
....+..|...... .+|||||++|+.++. ++ .|.+|+..+++......++...+..++|+||++.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34556677766666 889999999988877 66 48888998888766666665555577899999999999999
Q ss_pred CeEEEEeCCCCceeeeeeecccccEEEE--EEecCCCEEEEe----------------------ecCCcEEEEEcCCCeE
Q 021459 86 RTLRIWDARTPFDCLKTLRGHSDFVFCV--NFNPQSNLIVSG----------------------SFDESIRIWEVKTGKC 141 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~s~----------------------~~dg~i~~wd~~~~~~ 141 (312)
+.+++||+.++.. ......+...+... .++|+++.++.. +.+..|.+||+.+++.
T Consensus 102 ~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcc-eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 9999999987643 33333444444333 348899887742 2346799999998875
Q ss_pred EEEeeecCcCeEEEEEcc-CCCEEEEeeCC------CeEEEEeCCCCceeeEcccCCC-CcEEEEEECCCCCEEEEEec-
Q 021459 142 TRVIRAHSMPVTSVHFNR-DGSLIVSGSHD------GTCKIWDAGEGACLKTLIDDKD-PAVSFAKFSPNGKFILVGTL- 212 (312)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~- 212 (312)
.. +..+...+..+.|+| +|+.++....+ ..|.++|...+. ...+..... ..+....|+|||+.|+..+.
T Consensus 181 ~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 181 TV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp EE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred EE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 44 444566788999999 99988876653 368888876543 333333222 24566789999997766443
Q ss_pred CC----eEEEEEcCCCcEEEEEEccCCceeEEE---EEEEccCCcEEEEe---------ecCCeEEEEECCchheeeccc
Q 021459 213 DS----TLKLWNYSAGKFLKIYTGHTNKKYCIT---STFSVTNGKYIVSG---------SEDNCVYVWDLQQKTMIQKLD 276 (312)
Q Consensus 213 d~----~i~v~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~ 276 (312)
++ .|++||+.+++........ ....... .....++++.|+.. ..+..|.+||+.+++. ..+.
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~ 336 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVA 336 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEE
T ss_pred CCCCcceEEEEecCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEec
Confidence 22 3999999988754332211 1000000 00123556666543 5567999999987654 4444
Q ss_pred CCcc-----------ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 277 GHTD-----------SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 277 ~h~~-----------~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.+.. .+..++|+|+++.|+.++.. ++...||.++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~ 381 (388)
T 3pe7_A 337 RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLAT 381 (388)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEE
T ss_pred cccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEE
Confidence 4444 47888999999999887753 3556677664
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.7e-22 Score=167.69 Aligned_cols=244 Identities=10% Similarity=0.059 Sum_probs=178.7
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEeCCCcceEEEeeec-----cCCEEEEEEccCCCeEEEEc------------CC
Q 021459 24 AVSCVKFSNDGTLL-ASASLDKTVIIWSASSLALVHRFVGH-----SEGISDLAWSSDSHYICSAS------------DD 85 (312)
Q Consensus 24 ~v~~~~~s~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~------------~d 85 (312)
.+..++|+|+++.+ ++++.++.|.+||..+++.+..+... ...+..++|+|++++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47889999999865 55566789999999998877666531 22567899999999998886 57
Q ss_pred CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEE
Q 021459 86 RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
+.|.+||+.+. +....+.. ...+.+++|+|++++++++ ++.|.+||+.+++....+..+... ..+.|+|+++.++
T Consensus 115 ~~i~v~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~ 189 (337)
T 1pby_B 115 TRVALYDAETL-SRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVW 189 (337)
T ss_dssp CEEEEEETTTT-EEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCC
T ss_pred ceEEEEECCCC-cEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEe
Confidence 99999999875 33444433 3456778999999988877 688999999999887666544311 1236889988665
Q ss_pred EeeCCC------------------------eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEc
Q 021459 166 SGSHDG------------------------TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNY 221 (312)
Q Consensus 166 ~~~~d~------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 221 (312)
..+..+ .+.+||+.+++...............+.++|++++++++ ++.|++||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 544332 468999988776422222233456678899999999888 799999999
Q ss_pred CCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCC
Q 021459 222 SAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGH 278 (312)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 278 (312)
.+++.+..+..... ...+ ...+++++|++++.++.|.+||+.+++.+..+..+
T Consensus 268 ~~~~~~~~~~~~~~-~~~~---~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 268 EKNASIKRVPLPHS-YYSV---NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TTTEEEEEEECSSC-CCEE---EECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCcCcceecCCCc-eeeE---EECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 99888777654332 2222 33477888888899999999999988777666543
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=2.4e-21 Score=162.66 Aligned_cols=274 Identities=12% Similarity=0.131 Sum_probs=176.6
Q ss_pred CCEEEEE----eCCCeEEEEeC--CCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC----CeEEEEeCCCC--c-eee
Q 021459 34 GTLLASA----SLDKTVIIWSA--SSLALVHRFVGHSEGISDLAWSSDSHYICSASDD----RTLRIWDARTP--F-DCL 100 (312)
Q Consensus 34 ~~~l~t~----~~d~~i~vw~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~--~-~~~ 100 (312)
..+++.| +.++.|.+|.+ .+++.......+...+..++|+|++++|++++.+ +.+.+|++... . ..+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 3345555 34578888865 4454433222266777889999999999998875 79999987642 1 223
Q ss_pred eeeecccccEEEEEEecCCCEEEEee-cCCcEEEEEcCCCeEEEEe---eec-----------CcCeEEEEEccCCCEEE
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGS-FDESIRIWEVKTGKCTRVI---RAH-----------SMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~---~~~-----------~~~v~~~~~~~~~~~l~ 165 (312)
.....+......+++ +++.+++++ .++.|.+|++.....+... ..+ ...+.+++|+|+|++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 333334445566666 778777766 5789999999754322111 011 12347899999999665
Q ss_pred Eee-CCCeEEEEeCCCCce------e------eEcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcEEE--E
Q 021459 166 SGS-HDGTCKIWDAGEGAC------L------KTLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKFLK--I 229 (312)
Q Consensus 166 ~~~-~d~~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~--~ 229 (312)
++. .++.+.+|++..... + .............++|+|+|+++++++ .++.|.+||+.+++... .
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 554 578999998765331 1 112222334466788999999887776 68999999998775422 2
Q ss_pred EEccCCceeEEEEEEEccCCcEEEEeec--CCeEEEEECC--chh--eeecccCCccceEEEEEcCCCceEEEeeecCCe
Q 021459 230 YTGHTNKKYCITSTFSVTNGKYIVSGSE--DNCVYVWDLQ--QKT--MIQKLDGHTDSVISVTCHPTENKIASAGLDGDR 303 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~ 303 (312)
+................+++++|+++.. ++.|.+|++. +++ .+..+.. ...+..++|+|++++|++++.+ ++
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~-~~ 328 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRD-TN 328 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETT-TT
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECC-CC
Confidence 2222211111122334578888866554 5899999985 233 3344443 4567899999999998887754 46
Q ss_pred eEEEEeec
Q 021459 304 TVRVWVQD 311 (312)
Q Consensus 304 ~v~iw~~~ 311 (312)
+|.+|.+|
T Consensus 329 ~v~v~~~d 336 (361)
T 3scy_A 329 VIQIFERD 336 (361)
T ss_dssp EEEEEEEC
T ss_pred CEEEEEEE
Confidence 89998765
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=3.7e-22 Score=166.48 Aligned_cols=239 Identities=12% Similarity=0.074 Sum_probs=173.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeecc-CCEEEEEEccCCCeEE-EEcCCCeEEEEeCCCCceeeeeee
Q 021459 27 CVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHS-EGISDLAWSSDSHYIC-SASDDRTLRIWDARTPFDCLKTLR 104 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~~~~~~~~ 104 (312)
.+++++++.++++++.++.|++||..+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+. +....+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~-~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC-KNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC-cEEEEEE
Confidence 35678889999999999999999999988877776443 2578899999998654 5567899999999875 3333333
Q ss_pred c-c-----cccEEEEEEecCCCEEEEeecC------------CcEEEEEcCCCeEE---EEeeecCcCeEEEEEccCCCE
Q 021459 105 G-H-----SDFVFCVNFNPQSNLIVSGSFD------------ESIRIWEVKTGKCT---RVIRAHSMPVTSVHFNRDGSL 163 (312)
Q Consensus 105 ~-~-----~~~v~~~~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~ 163 (312)
. + ...+..++|+|+++++++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 2 2 2236788999999999988865 89999999875432 2333 334578899999999
Q ss_pred EEEeeCCCeEEEEeCCCCceeeEcccCC----------------------------------------------------
Q 021459 164 IVSGSHDGTCKIWDAGEGACLKTLIDDK---------------------------------------------------- 191 (312)
Q Consensus 164 l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------------------------------------------------- 191 (312)
+++++. .|.+||+.+++....+....
T Consensus 161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 555443 49999998877655432211
Q ss_pred ---------------CCcEEEEEECC-CCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEe
Q 021459 192 ---------------DPAVSFAKFSP-NGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 192 ---------------~~~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
......+.++| ++++++++ ++.|.+||+.+++.+..+..... ...+ ...++++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~-~~~~---~~s~dg~~l~~~ 312 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT-YYCV---AFDKKGDKLYLG 312 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC-CCEE---EECSSSSCEEEE
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC-ccce---EECCCCCEEEEe
Confidence 00223456779 99998888 88999999999988777654332 2222 234677777778
Q ss_pred ecCCeEEEEECCchheeeccc
Q 021459 256 SEDNCVYVWDLQQKTMIQKLD 276 (312)
Q Consensus 256 ~~dg~i~iwd~~~~~~~~~~~ 276 (312)
+.++.|.+||+.+.+.+..++
T Consensus 313 ~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 313 GTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp SBSSEEEEEETTTTEEEEEEE
T ss_pred cCCCeEEEEeccccceeeeee
Confidence 889999999998877766554
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=3.8e-21 Score=160.54 Aligned_cols=248 Identities=12% Similarity=0.178 Sum_probs=165.8
Q ss_pred ccccceEEEEECCCCCEEEEEeC---CCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccCCCeEEEEc-CCCeEEEEeC
Q 021459 20 AHSRAVSCVKFSNDGTLLASASL---DKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSDSHYICSAS-DDRTLRIWDA 93 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~---d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~wd~ 93 (312)
.+......++|+|+|+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|+|++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4556777899999999 555443 6899999997654 4445556777889999999999888887 6799999998
Q ss_pred CCCc--eeeeeeec---------ccccEEEEEEecCCCEEEEeecCCcEEEEEcC-CCeEEEE--eee-cCcCeEEEEEc
Q 021459 94 RTPF--DCLKTLRG---------HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK-TGKCTRV--IRA-HSMPVTSVHFN 158 (312)
Q Consensus 94 ~~~~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~-~~~~~~~--~~~-~~~~v~~~~~~ 158 (312)
.... ..+..... +...+.+++|+|+++.+++...++.|.+||+. +++.... +.. .......++|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 5321 22222221 11247889999999966666668899999998 5543321 222 22357789999
Q ss_pred cCCCEEEE-eeCCCeEEEEeCCC--Ccee--eEcccCC-----CCcEEEEEECCCCCEEEE-EecCCeEEEEEcCCC---
Q 021459 159 RDGSLIVS-GSHDGTCKIWDAGE--GACL--KTLIDDK-----DPAVSFAKFSPNGKFILV-GTLDSTLKLWNYSAG--- 224 (312)
Q Consensus 159 ~~~~~l~~-~~~d~~i~iwd~~~--~~~~--~~~~~~~-----~~~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~--- 224 (312)
|+|+++++ ...++.+.+|++.. ++.. ..+.... ......++|+|+|++|++ ...++.|.+||+...
T Consensus 196 pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE
Confidence 99996655 56788999998764 4321 1111111 133667889999998754 456899999998632
Q ss_pred cEEEEEEccCCceeEEEEEEEccCCcEEEEeec-CCeEEEEEC--Cchhe
Q 021459 225 KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE-DNCVYVWDL--QQKTM 271 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~iwd~--~~~~~ 271 (312)
+.+..+..+......+ . ..+++++|++++. ++.|.+|++ .++++
T Consensus 276 ~~~~~~~~~~~~~~~~--~-~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 276 TLIQQISTEGDFPRDF--D-LDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEECSSSCCCEE--E-ECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEeEEEecCCCCcCeE--E-ECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 3333444333222222 2 3478888777665 599999954 44443
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.8e-23 Score=189.81 Aligned_cols=280 Identities=12% Similarity=0.061 Sum_probs=181.5
Q ss_pred ceEEEEECCCCCEEEEEeC---------CCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 24 AVSCVKFSNDGTLLASASL---------DKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~---------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
.+.+++|||||++|++++. ++.|++||+.+++.+.. ......+..++|+|||+.|+.+. ++.|++|++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCCCSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eecCcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 3899999999999998876 78999999998765210 11135688899999999999885 7899999997
Q ss_pred CCceeeeeeecccccE-----------------EEEEEecCCCEEEEeecCC----------------------------
Q 021459 95 TPFDCLKTLRGHSDFV-----------------FCVNFNPQSNLIVSGSFDE---------------------------- 129 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg---------------------------- 129 (312)
++........++...+ .+++|+|||+.|++++.|.
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 6543221222333322 4799999999999887652
Q ss_pred ------cEEEEEcCCCeEE---EE-----eeecCcCeEEEEEccCCCEEEEeeCC----CeEEEEe----CCCCceeeEc
Q 021459 130 ------SIRIWEVKTGKCT---RV-----IRAHSMPVTSVHFNRDGSLIVSGSHD----GTCKIWD----AGEGACLKTL 187 (312)
Q Consensus 130 ------~i~~wd~~~~~~~---~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~~~~ 187 (312)
.|++||+.+++.. .. +..|...+..++|+||++++++.... ..|.+|| ..+++.....
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 6889999887642 11 22466678999999998877764432 2488899 7766544322
Q ss_pred c---cCCCCcEE-----EEEECCCCCEEEE--EecCC--eEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEe
Q 021459 188 I---DDKDPAVS-----FAKFSPNGKFILV--GTLDS--TLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 188 ~---~~~~~~~~-----~~~~~~~~~~l~~--~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
. ..+...+. ...|+|+|+.++. ...++ .|.+||+.+++. ..+..+..... ...++ +++.|+..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~--~~~~~--d~~~i~~~ 373 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWEAI--NIFRV--TQDSLFYS 373 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSCEE--EEEEE--CSSEEEEE
T ss_pred ecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceEEE--EEEEE--eCCEEEEE
Confidence 1 12222222 4579999996654 43455 577777766663 33333222222 22333 45555444
Q ss_pred ec-----CCeEEEEECCc--hh-eeec----ccCCccceEEEEEcCCCceEEEe-eecCCeeEEEEee
Q 021459 256 SE-----DNCVYVWDLQQ--KT-MIQK----LDGHTDSVISVTCHPTENKIASA-GLDGDRTVRVWVQ 310 (312)
Q Consensus 256 ~~-----dg~i~iwd~~~--~~-~~~~----~~~h~~~v~~l~~~p~~~~l~~~-~~dgd~~v~iw~~ 310 (312)
+. ++.+++|.+.. +. .... +.+|...+..+.|+|++++++.. +.+....+.+|+.
T Consensus 374 ~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 374 SNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp ESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred EecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 44 48888987643 21 1222 23366778899999999887743 3333346667754
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.3e-22 Score=185.44 Aligned_cols=278 Identities=10% Similarity=0.098 Sum_probs=187.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccC---CEEEEEEccCCCeEEEEcC---------CCeEEEEeCC
Q 021459 27 CVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSE---GISDLAWSSDSHYICSASD---------DRTLRIWDAR 94 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~v~~wd~~ 94 (312)
.++|+|+|+++++ +.|+.|++|+..+++....+..|.. .+.+++|+|||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6799999966555 4699999999999887666655544 4899999999999998876 6899999998
Q ss_pred CCceee-eeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe-eecCcCe-----------------EEE
Q 021459 95 TPFDCL-KTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI-RAHSMPV-----------------TSV 155 (312)
Q Consensus 95 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~v-----------------~~~ 155 (312)
++.... ..+ ...+..++|+|||+.|+++. ++.|++||+.+++..... ..+...+ ..+
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 753200 222 24577899999999999875 789999999888765432 1222212 479
Q ss_pred EEccCCCEEEEeeCCC----------------------------------eEEEEeCCCCcee--eEc-----ccCCCCc
Q 021459 156 HFNRDGSLIVSGSHDG----------------------------------TCKIWDAGEGACL--KTL-----IDDKDPA 194 (312)
Q Consensus 156 ~~~~~~~~l~~~~~d~----------------------------------~i~iwd~~~~~~~--~~~-----~~~~~~~ 194 (312)
+|+|||+.|+.++.|. .+.+||+.+++.. ..+ ...+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999887652 7889999887642 111 1123445
Q ss_pred EEEEEECCCCCEEEEEecC----CeEEEEE----cCCCcEEEEE----EccCCceeE--EEEEEEccCCcEEE--EeecC
Q 021459 195 VSFAKFSPNGKFILVGTLD----STLKLWN----YSAGKFLKIY----TGHTNKKYC--ITSTFSVTNGKYIV--SGSED 258 (312)
Q Consensus 195 ~~~~~~~~~~~~l~~~~~d----~~i~v~d----~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~l~--~~~~d 258 (312)
+..+.|+||++++++.... ..|.+|| ..+++..... ..+...... .....+.++++.++ +...+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 6778899998776664332 2488899 7666543333 233322110 00112346777544 34455
Q ss_pred C--eEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeec---CCeeEEEEeec
Q 021459 259 N--CVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLD---GDRTVRVWVQD 311 (312)
Q Consensus 259 g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~d---gd~~v~iw~~~ 311 (312)
| .|.+||+..++ ...+..+...+..+.+. +++.++..+.+ +++.+++|.++
T Consensus 335 g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 335 GYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 5 56677776655 44555566667888777 87777766643 34678888764
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=1.2e-20 Score=157.67 Aligned_cols=229 Identities=9% Similarity=0.086 Sum_probs=172.5
Q ss_pred cceEEEEECCCCCEEE-EEeCCCeEEEEeCCCcceEEEeeeccCC---------EEEEEEccCCCeEEEEc--CCCeEEE
Q 021459 23 RAVSCVKFSNDGTLLA-SASLDKTVIIWSASSLALVHRFVGHSEG---------ISDLAWSSDSHYICSAS--DDRTLRI 90 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~d~~v~~ 90 (312)
..+..++|+|++++++ +...++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 4467889999999554 5556799999999999887777654322 78899999999877765 4788999
Q ss_pred EeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeee----cCcCeEEEEEccCCCEEEE
Q 021459 91 WDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRA----HSMPVTSVHFNRDGSLIVS 166 (312)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~ 166 (312)
||..+. +....+..+...+.+++|+|+++.+++++.++.|.+||+.+++....+.. +...+..++|+|+++++++
T Consensus 169 ~d~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 169 VDGGNI-KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EETTTT-EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EcCCCC-ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 999875 44555554555577899999999999999999999999999988776654 3445778999999997766
Q ss_pred eeC-CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEE
Q 021459 167 GSH-DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTF 244 (312)
Q Consensus 167 ~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
++. ++.|.+||..+++....+..... ..+.++|++++++++. .++.|.+||..+++.+..+..... ... ..
T Consensus 248 ~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~-~~ 320 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTH---PNS-LA 320 (353)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSE---EEE-EE
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCC---CCe-EE
Confidence 654 58999999998887766543322 3467999999766665 689999999999988777654332 122 23
Q ss_pred EccCCcEEEEeecCC
Q 021459 245 SVTNGKYIVSGSEDN 259 (312)
Q Consensus 245 ~~~~~~~l~~~~~dg 259 (312)
..+++++|+.+..++
T Consensus 321 ~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 321 LSADGKTLYVSVKQK 335 (353)
T ss_dssp ECTTSCEEEEEEECC
T ss_pred EcCCCCEEEEEEccc
Confidence 346777666655543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=4.9e-20 Score=154.68 Aligned_cols=262 Identities=14% Similarity=0.190 Sum_probs=171.6
Q ss_pred cccceEEEEECCCCCEEEEEeCC----CeEEEEeCCC--cc--eEEEeeeccCCEEEEEEccCCCeEEEEc-CCCeEEEE
Q 021459 21 HSRAVSCVKFSNDGTLLASASLD----KTVIIWSASS--LA--LVHRFVGHSEGISDLAWSSDSHYICSAS-DDRTLRIW 91 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d----~~i~vw~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~w 91 (312)
+......++|+|+|++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66677889999999999998875 7999998764 33 23333445556777888 788777665 57899999
Q ss_pred eCCCCcee--eee---eec--------ccccEEEEEEecCCCEEEEee-cCCcEEEEEcCCCeE------E-------EE
Q 021459 92 DARTPFDC--LKT---LRG--------HSDFVFCVNFNPQSNLIVSGS-FDESIRIWEVKTGKC------T-------RV 144 (312)
Q Consensus 92 d~~~~~~~--~~~---~~~--------~~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~------~-------~~ 144 (312)
++...... +.. ..+ +...+.+++|+|+++++++++ .++.|.+|++..... + ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 98643221 111 111 122357899999999766555 478999998875431 1 11
Q ss_pred eeecCcCeEEEEEccCCCEEEEee-CCCeEEEEeCCCCcee--eEcc--cCCCCcEEEEEECCCCCEEEEEecC--CeEE
Q 021459 145 IRAHSMPVTSVHFNRDGSLIVSGS-HDGTCKIWDAGEGACL--KTLI--DDKDPAVSFAKFSPNGKFILVGTLD--STLK 217 (312)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~ 217 (312)
...+......++|+|+|+++++++ .++.|.+||+.++... ..+. .........++|+|+|++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 223345578999999999887766 6899999998866432 2221 1112335678899999998776654 8999
Q ss_pred EEEcC--CCcE--EEEEEccCCceeEEEEEEEccCCcEEEEee-cCCeEEEEEC--Cchheeecc-cCCccceEEEEEc
Q 021459 218 LWNYS--AGKF--LKIYTGHTNKKYCITSTFSVTNGKYIVSGS-EDNCVYVWDL--QQKTMIQKL-DGHTDSVISVTCH 288 (312)
Q Consensus 218 v~d~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~--~~~~~~~~~-~~h~~~v~~l~~~ 288 (312)
+|++. +++. +..+.. ......+ ...+++++|++++ .++.|.+|++ .++++.... ..+...+.||+|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~---~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNF---IITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEE---EECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceE---EECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99985 4443 333332 1122222 2347888887776 6799999654 455443332 1234568888885
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.2e-21 Score=165.53 Aligned_cols=160 Identities=11% Similarity=0.133 Sum_probs=129.9
Q ss_pred ccccceEEEEECCCCCEEE----EEeCCCeEEEEeCCCc--------c---eEEEeeeccCCEEEEEEccC-CCeEEEEc
Q 021459 20 AHSRAVSCVKFSNDGTLLA----SASLDKTVIIWSASSL--------A---LVHRFVGHSEGISDLAWSSD-SHYICSAS 83 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~----t~~~d~~i~vw~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 83 (312)
.|...|++++|+|++++|+ +++.|+.|++||+.+. + .+..+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3567899999999999999 8889999999998654 1 13455679999999999998 78999999
Q ss_pred CCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec-------CcCeEEEE
Q 021459 84 DDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH-------SMPVTSVH 156 (312)
Q Consensus 84 ~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~-------~~~v~~~~ 156 (312)
.||.|++||+++. .......+|...+.+++|+|++++|++|+.||.|++||++ ++....+..| ...+.++.
T Consensus 170 ~Dg~v~iwD~~~~-~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 170 ADGSIAVLQVTET-VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TTSCEEEEEESSS-EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCCeEEEEEcCCC-cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 9999999999876 3444556788999999999999999999999999999998 5545444433 23789999
Q ss_pred EccCCCEEEEe-eCCC------eEEEEeCCCC
Q 021459 157 FNRDGSLIVSG-SHDG------TCKIWDAGEG 181 (312)
Q Consensus 157 ~~~~~~~l~~~-~~d~------~i~iwd~~~~ 181 (312)
|++++.++++. ..+| .+++|++++.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99988776543 3333 3889998764
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=8.5e-22 Score=167.19 Aligned_cols=277 Identities=12% Similarity=0.082 Sum_probs=181.6
Q ss_pred eEEEEECCCCCEEEEEeCC---CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeee
Q 021459 25 VSCVKFSNDGTLLASASLD---KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLK 101 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d---~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~ 101 (312)
+..++|+|||++|+..... ..|.+|+..+++......++......+.|+|+|++|+.++.++.|++||+.++.. ..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~-~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE-QV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE-EE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc-EE
Confidence 7788999999998776543 4688889888765433222222223378999999999999999999999876532 22
Q ss_pred eeecccccEEE-------------------EEEecCCCEEEEe-----ecCCcEEEEEcCCCeEEEEeeecCcCeEEEEE
Q 021459 102 TLRGHSDFVFC-------------------VNFNPQSNLIVSG-----SFDESIRIWEVKTGKCTRVIRAHSMPVTSVHF 157 (312)
Q Consensus 102 ~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
....+...... +.++|+++.++.. ..+..|.+||+.+++..... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 22223222222 2456777665543 34567999999988765444 45667889999
Q ss_pred cc-CCCEEEEeeCC------CeEEEEeCCCCceeeEcccCC-CCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCC
Q 021459 158 NR-DGSLIVSGSHD------GTCKIWDAGEGACLKTLIDDK-DPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAG 224 (312)
Q Consensus 158 ~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~ 224 (312)
+| +++.++..+.+ ..|.+||+..+.. ..+.... ...+..+.|+|+|+.|+..+.+ +.|++||+.++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 99 78877665543 3688888865542 2332221 2246667899999988777544 45999999888
Q ss_pred cEEEEEEccCCceeEEEEEEEccCCcEEEEee----------------cCCeEEEEECCchheeecccCCcc--------
Q 021459 225 KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGS----------------EDNCVYVWDLQQKTMIQKLDGHTD-------- 280 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------------~dg~i~iwd~~~~~~~~~~~~h~~-------- 280 (312)
+........ . . . ..+.+++++++++++ .++.|.+||+.+++. ..+..+..
T Consensus 275 ~~~~l~~~~-~-~-~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~ 348 (396)
T 3c5m_A 275 ENEEVMVMP-P-C-S--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGD 348 (396)
T ss_dssp CEEEEEECC-S-E-E--EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTB
T ss_pred CeEEeeeCC-C-C-C--CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCcccccccc
Confidence 754433221 1 1 1 344432788887654 357899999987654 34444433
Q ss_pred ---ceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 281 ---SVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 281 ---~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
.+..++|+|+++.|+.++.++ +...||.++
T Consensus 349 ~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~ 381 (396)
T 3c5m_A 349 RQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIAD 381 (396)
T ss_dssp SSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEE
T ss_pred ccCCCCCceEccCCCeEEEEecCC-CCceEEEEE
Confidence 256678999999998887543 455677654
No 161
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.89 E-value=3.9e-21 Score=174.06 Aligned_cols=291 Identities=12% Similarity=0.069 Sum_probs=195.7
Q ss_pred eeeecccccceEEEEECCCCCEEEEE--eCCCeEEEEeCCCcceEEEeeeccCCEE---------EEEEc--cCCCe-EE
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASA--SLDKTVIIWSASSLALVHRFVGHSEGIS---------DLAWS--SDSHY-IC 80 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~--~~d~~i~vw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~ 80 (312)
.+.+.+|...+..++|++++-++++. +.++...+|....+.....+..+...+. ...|+ |||+. |+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 34577899999999999887677776 5678899998654444556666666655 66666 99998 77
Q ss_pred EEcC-CCeEEEEeCC--C-Cceeeeeeec-----ccccEEEEEEecCCCEEEEeecC----------CcEEEEEcCC---
Q 021459 81 SASD-DRTLRIWDAR--T-PFDCLKTLRG-----HSDFVFCVNFNPQSNLIVSGSFD----------ESIRIWEVKT--- 138 (312)
Q Consensus 81 ~~~~-d~~v~~wd~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----------g~i~~wd~~~--- 138 (312)
.++. +..|.++++. . + . ...+.. |...+..++|+||++.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~-~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGA-V-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCC-C-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEECCCCeEEEEcCCCCCCC-C-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 6654 5667777765 2 2 1 233333 56678899999999999988876 5799999987
Q ss_pred ---CeEEEEee-ecCcCeEEEEEccCCCEEEEeeCC--------CeEEEEeCC-CCc--eeeEcccCCCCcEEEEEECCC
Q 021459 139 ---GKCTRVIR-AHSMPVTSVHFNRDGSLIVSGSHD--------GTCKIWDAG-EGA--CLKTLIDDKDPAVSFAKFSPN 203 (312)
Q Consensus 139 ---~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 203 (312)
++. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+. ++. ....+...+...+....|+||
T Consensus 174 ~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 174 ADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp TCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred ccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 554 3444 445567788999999999877755 379999998 451 333443333456777889999
Q ss_pred CCEEEEEecCC--eEEEEEcCCCcEEEEEEccCCce---eE--EEEEEEccCCcEEEEeecCCeEEEE--ECCchheeec
Q 021459 204 GKFILVGTLDS--TLKLWNYSAGKFLKIYTGHTNKK---YC--ITSTFSVTNGKYIVSGSEDNCVYVW--DLQQKTMIQK 274 (312)
Q Consensus 204 ~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~ 274 (312)
|++++++..++ .|.+||..+++.......+.... +. +......++++++++++. |.++|| |+..++ +..
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~ 330 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVD 330 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEE
Confidence 99777777777 66667765666544333221110 00 011122357889999988 999999 555444 567
Q ss_pred ccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 275 LDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 275 ~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+..|...+..+. ++++..++..+.+.+....+|.++
T Consensus 331 l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 331 AAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEE
T ss_pred ecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEE
Confidence 777777777661 445554444444455666666554
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=2.8e-20 Score=156.45 Aligned_cols=272 Identities=10% Similarity=0.117 Sum_probs=173.7
Q ss_pred EEEEeCC--CeEEEEeC--CCcceEE--Eee-eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC-CCceeeeeeecc-c
Q 021459 37 LASASLD--KTVIIWSA--SSLALVH--RFV-GHSEGISDLAWSSDSHYICSASDDRTLRIWDAR-TPFDCLKTLRGH-S 107 (312)
Q Consensus 37 l~t~~~d--~~i~vw~~--~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~-~~~~~~~~~~~~-~ 107 (312)
++.|+.. +.|.+|++ .++++.. ... .....+..++|+|++++|++++.+ .|.+|++. ++ +........ .
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~~~~~~~ 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHEASHPIG 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEEEEEECC
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEeeEeecC
Confidence 4444432 45776654 4454322 111 133467889999999999988877 99999986 43 222221110 1
Q ss_pred ccEEEEEEecCCCE--EEEee-------------cCCcEEEEEcC-CCeEEEEeee----cCcCeEEEEEccCCCEEEEe
Q 021459 108 DFVFCVNFNPQSNL--IVSGS-------------FDESIRIWEVK-TGKCTRVIRA----HSMPVTSVHFNRDGSLIVSG 167 (312)
Q Consensus 108 ~~v~~~~~~~~~~~--l~s~~-------------~dg~i~~wd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 167 (312)
+...+++|+|+++. +++++ .+|.+.+|++. .++....+.. +...+.+++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 22445788999984 55553 68999999997 4655433332 44568899999999988876
Q ss_pred eC-CCeEEEEeCC-CCcee--eEcccC-CCCcEEEEEECCCCCEEEEEec-CCeEEEEEcC--CCcEEE---EEEccCCc
Q 021459 168 SH-DGTCKIWDAG-EGACL--KTLIDD-KDPAVSFAKFSPNGKFILVGTL-DSTLKLWNYS--AGKFLK---IYTGHTNK 236 (312)
Q Consensus 168 ~~-d~~i~iwd~~-~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-d~~i~v~d~~--~~~~~~---~~~~~~~~ 236 (312)
.. ++.|.+||+. +++.. ..+... +......++|+|+|+++++++. ++.|.+|++. +++... .+......
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 54 6799999998 66542 222111 1344677889999999888764 6899999875 455421 22211110
Q ss_pred ----e-------eEEEEEEEccCCcEEEEeecC-C-----eEEEEECC-chheee---cccCCccceEEEEEcC---CCc
Q 021459 237 ----K-------YCITSTFSVTNGKYIVSGSED-N-----CVYVWDLQ-QKTMIQ---KLDGHTDSVISVTCHP---TEN 292 (312)
Q Consensus 237 ----~-------~~~~~~~~~~~~~~l~~~~~d-g-----~i~iwd~~-~~~~~~---~~~~h~~~v~~l~~~p---~~~ 292 (312)
. ......+..+++++|++++.+ + .|.+|++. +++... ....+...+..++|+| +++
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC
Confidence 1 222333156789888766543 2 89999986 444332 2333445567889999 799
Q ss_pred eEEEeeecCCeeEEEEeec
Q 021459 293 KIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 293 ~l~~~~~dgd~~v~iw~~~ 311 (312)
+|++++.+ +++|++|+++
T Consensus 323 ~l~v~~~~-~~~v~v~~~~ 340 (365)
T 1jof_A 323 WMAITDDQ-EGWLEIYRWK 340 (365)
T ss_dssp EEEEECSS-SCEEEEEEEE
T ss_pred EEEEEEcC-CCeEEEEEEc
Confidence 99888754 3689999875
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=5.7e-20 Score=154.56 Aligned_cols=245 Identities=9% Similarity=0.097 Sum_probs=163.9
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCC-CcceEEEeeec-cCCEEEEEEccCCCe--EEEEc-------------C
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSAS-SLALVHRFVGH-SEGISDLAWSSDSHY--ICSAS-------------D 84 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~ 84 (312)
...+..++|+|+|++|++++.+ .|.+|++. +++........ .+.+..++|+|+|++ ++++. .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3467889999999999998887 99999986 66554322211 123556899999994 55553 6
Q ss_pred CCeEEEEeCCCCceeeeeee----cccccEEEEEEecCCCEEEEeec-CCcEEEEEcC-CCeEEE--Eee--ecCcCeEE
Q 021459 85 DRTLRIWDARTPFDCLKTLR----GHSDFVFCVNFNPQSNLIVSGSF-DESIRIWEVK-TGKCTR--VIR--AHSMPVTS 154 (312)
Q Consensus 85 d~~v~~wd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~-~~~~~~--~~~--~~~~~v~~ 154 (312)
++.+.+|++....+....+. .+...+.+++|+|+++++++++. ++.|++||+. +++... .+. .+...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 88999999864223222222 24457889999999998887664 5789999998 676432 232 13556889
Q ss_pred EEEccCCCEEEEeeC-CCeEEEEeCC--CCceee---Ec--ccCC--C-C-------cEEEEE-ECCCCCEEEEEecC-C
Q 021459 155 VHFNRDGSLIVSGSH-DGTCKIWDAG--EGACLK---TL--IDDK--D-P-------AVSFAK-FSPNGKFILVGTLD-S 214 (312)
Q Consensus 155 ~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~~---~~--~~~~--~-~-------~~~~~~-~~~~~~~l~~~~~d-~ 214 (312)
++|+|+|+++++++. ++.+.+|+.. +++... .+ .... . . ....++ |+|+|++|+++..+ +
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 999999998887764 6899998764 454321 11 1111 1 1 366788 99999998877543 2
Q ss_pred -----eEEEEEcC-CCcEEEE---EEccCCceeEEEEEEEcc--CCcEEEEeec-CCeEEEEECCch
Q 021459 215 -----TLKLWNYS-AGKFLKI---YTGHTNKKYCITSTFSVT--NGKYIVSGSE-DNCVYVWDLQQK 269 (312)
Q Consensus 215 -----~i~v~d~~-~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-dg~i~iwd~~~~ 269 (312)
.|.+|++. +++.... ...+......+ .+.+. ++++|++++. ++.|.+|++...
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~--a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN--AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC--CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc--eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 5654432 22222111112 23322 6888888876 499999988654
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=2.6e-20 Score=155.22 Aligned_cols=234 Identities=15% Similarity=0.120 Sum_probs=165.3
Q ss_pred EEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc-ccEEEEEEecCCCEEE-EeecCCcEEEEEcCCCeEEEEee
Q 021459 69 DLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHS-DFVFCVNFNPQSNLIV-SGSFDESIRIWEVKTGKCTRVIR 146 (312)
Q Consensus 69 ~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~ 146 (312)
.+++++++.++++++.++.|.+||+.+. +.+..+..+. .....++|+|+++.++ +...++.|.+||+.+++....+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 3567788889999999999999999875 4444544332 1467889999998654 55568899999999998776665
Q ss_pred ecC------cCeEEEEEccCCCEEEEeeCC------------CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEE
Q 021459 147 AHS------MPVTSVHFNRDGSLIVSGSHD------------GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFI 207 (312)
Q Consensus 147 ~~~------~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 207 (312)
... ..+..++|+|+|+++++++.+ +.|.+||+.+++...... ......+..++++|+|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-E
Confidence 332 236789999999999988865 899999998754322111 11122355667999999 5
Q ss_pred EEEecCCeEEEEEcCCCcEEEEEEccCC------------------------ceeEE-----------------------
Q 021459 208 LVGTLDSTLKLWNYSAGKFLKIYTGHTN------------------------KKYCI----------------------- 240 (312)
Q Consensus 208 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~------------------------~~~~~----------------------- 240 (312)
++++ +.|++||..+++.+..+..... ....+
T Consensus 162 ~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 5553 3499999998887766543210 00000
Q ss_pred ------------------EEEEEcc-CCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecC
Q 021459 241 ------------------TSTFSVT-NGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 241 ------------------~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
......+ ++++++++ ++.|.+||+.+++....+.. ...+.+++|+|++++|++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-- 314 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGT-- 314 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESB--
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecC--
Confidence 0111225 78888877 88999999998877766653 234678999999999888654
Q ss_pred CeeEEEEeec
Q 021459 302 DRTVRVWVQD 311 (312)
Q Consensus 302 d~~v~iw~~~ 311 (312)
++.|++|+.+
T Consensus 315 ~~~v~v~d~~ 324 (349)
T 1jmx_B 315 FNDLAVFNPD 324 (349)
T ss_dssp SSEEEEEETT
T ss_pred CCeEEEEecc
Confidence 4789999874
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=2.3e-20 Score=171.06 Aligned_cols=279 Identities=11% Similarity=0.101 Sum_probs=181.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCC-----EEEEEEccCCCeEEEEcCC---------CeEE
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEG-----ISDLAWSSDSHYICSASDD---------RTLR 89 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~v~ 89 (312)
....++|+|||.+++++ |+.|++|+..+++....+.+|... ..+++|+|||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35578999999999886 899999999999877666666532 2458899999999988775 5677
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee-ecCcCe----------------
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR-AHSMPV---------------- 152 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~v---------------- 152 (312)
+||+.++. ...+..+.+.+..++|+|||+.|+.+ .++.|++||+.+++..+... ++...+
T Consensus 96 ~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 96 IYDLNKRQ--LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEETTTTE--ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEECCCCc--EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 99998753 34456677789999999999999887 46899999998877544221 222212
Q ss_pred -EEEEEccCCCEEEEeeCCC------------------------------------eEEEEeCCC---Cc--eeeEccc-
Q 021459 153 -TSVHFNRDGSLIVSGSHDG------------------------------------TCKIWDAGE---GA--CLKTLID- 189 (312)
Q Consensus 153 -~~~~~~~~~~~l~~~~~d~------------------------------------~i~iwd~~~---~~--~~~~~~~- 189 (312)
..+.|+|||+.|+.++.|. .+.+||+.+ +. ....+..
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3488999999998765321 477889887 62 1222221
Q ss_pred ----CCCCcEEEEEECCCCCEEEEEec----CCeEEEEEcCCCc----EE---EEE-EccCCcee---EEEEEEEccCCc
Q 021459 190 ----DKDPAVSFAKFSPNGKFILVGTL----DSTLKLWNYSAGK----FL---KIY-TGHTNKKY---CITSTFSVTNGK 250 (312)
Q Consensus 190 ----~~~~~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~----~~---~~~-~~~~~~~~---~~~~~~~~~~~~ 250 (312)
.+...+..+.|+|||+.++.... +..|++||..+++ +. ..+ ..+..... ... ..+.++|+
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~-p~fspDG~ 331 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE-PHFTLDGN 331 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC-CEECTTSS
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC-ceEcCCCC
Confidence 13445677889999997665533 3379999998876 21 111 22221111 001 12347888
Q ss_pred EEE-Eeec-C--CeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeee---cCCeeEEEEee
Q 021459 251 YIV-SGSE-D--NCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL---DGDRTVRVWVQ 310 (312)
Q Consensus 251 ~l~-~~~~-d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~---dgd~~v~iw~~ 310 (312)
.|+ ..++ + ..|.+||+..+... .+....-.|..+.. ++++.++..+. ++.....||.+
T Consensus 332 ~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 332 SFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp EEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 766 5543 3 46888888765544 33333445555432 44665554443 22334455544
No 166
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=9.9e-21 Score=168.92 Aligned_cols=231 Identities=12% Similarity=0.082 Sum_probs=162.8
Q ss_pred cCCEEEEEEccCCCeEEEEcC-CCeEEEEeCCCCceeeeeeeccc-ccEEEEEEecCCCEEEEeec---CCcEEEEEcCC
Q 021459 64 SEGISDLAWSSDSHYICSASD-DRTLRIWDARTPFDCLKTLRGHS-DFVFCVNFNPQSNLIVSGSF---DESIRIWEVKT 138 (312)
Q Consensus 64 ~~~v~~~~~~~~~~~l~~~~~-d~~v~~wd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~ 138 (312)
..+|++++|+|||+.|++++. ||.++||++.++ + ...+..+. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-E-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-E-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-C-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 567999999999999999887 999999998553 3 33444444 57899999999 77777765 44556655433
Q ss_pred ---CeEEEEeeecCcCeEEEEEccCCCE-EEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecC-
Q 021459 139 ---GKCTRVIRAHSMPVTSVHFNRDGSL-IVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLD- 213 (312)
Q Consensus 139 ---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 213 (312)
+... .+.. .......+|+|+++. +++.+.++.+.+||+.+++..... .... ....|+|||++|+.++.+
T Consensus 98 ~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~---~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 98 SRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG---FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp TSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS---CEEEEEEETTEEEEEEEEE
T ss_pred cCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC---ceEEECCCCCEEEEEEEcC
Confidence 2222 2222 223446688888853 334444455569999887644322 2222 556799999999988776
Q ss_pred ---CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC--eEEEEECCchheeecccCCccceEEEE--
Q 021459 214 ---STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN--CVYVWDLQQKTMIQKLDGHTDSVISVT-- 286 (312)
Q Consensus 214 ---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~-- 286 (312)
+.|++||+.+++.. .+..+.... ....+.++|+.|+++..+| .|++||+.+++.. .+.+|...+..++
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~~~~~~~---~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFDSGEGSF---SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EECCSSCEE---EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred CCCeEEEEEcCCCCCce-EeecCCCcc---ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 78999999888764 444444332 3334458999999888888 8999999887766 7777777777777
Q ss_pred ------EcCCCceEEEeeecCCeeEEEEee
Q 021459 287 ------CHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 287 ------~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
|+|++..+++++.| ++++||.+
T Consensus 247 ~~~~~~~spdg~~~~~~~~~--g~~~l~~~ 274 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARRE--GRSAVFID 274 (582)
T ss_dssp EEEEEEECTTSCEEEEEEET--TEEEEEET
T ss_pred cccceeEcCCCcEEEEEEcC--CcEEEEEE
Confidence 99999777777755 48999974
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=6.2e-19 Score=146.13 Aligned_cols=244 Identities=16% Similarity=0.186 Sum_probs=177.2
Q ss_pred cccceEEEEECCCCCEEEEEeCC------------------------CeEEEEeCCCcceEEEee-eccCCEEEEEEccC
Q 021459 21 HSRAVSCVKFSNDGTLLASASLD------------------------KTVIIWSASSLALVHRFV-GHSEGISDLAWSSD 75 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d------------------------~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~ 75 (312)
--+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. ++......++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 35679999999999999888777 479999998888765443 33457889999999
Q ss_pred CCeEEEEcCCCeEEEEeCCCCceeeeee---------ecccccEEEEEEec-CCCEEEEee-cCCcEEEEEcCCCeEEEE
Q 021459 76 SHYICSASDDRTLRIWDARTPFDCLKTL---------RGHSDFVFCVNFNP-QSNLIVSGS-FDESIRIWEVKTGKCTRV 144 (312)
Q Consensus 76 ~~~l~~~~~d~~v~~wd~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~~wd~~~~~~~~~ 144 (312)
|+++++...++.|++||.......+..+ .++......++++| +++++++.+ .++.|++|| .+++.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888889999999986532233333 23334678899999 788888876 689999999 55666665
Q ss_pred eeecC----------cCeEEEEEccC-CCEEEEeeCCCeEEEEeCCCCceeeEcccC-CCCcEEEEEECC------CCCE
Q 021459 145 IRAHS----------MPVTSVHFNRD-GSLIVSGSHDGTCKIWDAGEGACLKTLIDD-KDPAVSFAKFSP------NGKF 206 (312)
Q Consensus 145 ~~~~~----------~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~ 206 (312)
+.... .....++++|+ +.++++...++.|++||..+++.+..+... .......+.++| +|+.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~ 260 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP 260 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE
Confidence 53222 23789999998 788888888999999999878777665322 233456677888 2322
Q ss_pred EEEEecCCeEEEEEcCCCcEEEEEE---ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 207 ILVGTLDSTLKLWNYSAGKFLKIYT---GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 207 l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
.++...+..|++||..+++.+..+. .+......+ . ..+++.++++...++.|++|++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~i--a-~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDI--V-ASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEE--E-ECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEE--E-ECCCCCEEEEECCCCEEEEEeCCc
Confidence 2223344589999999999888774 222222233 2 346788889999999999999754
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=6.7e-18 Score=137.00 Aligned_cols=242 Identities=12% Similarity=0.217 Sum_probs=172.2
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee------eccCCEEEEEEc-cCCCeEEEEcC-CCeEEEE
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV------GHSEGISDLAWS-SDSHYICSASD-DRTLRIW 91 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-d~~v~~w 91 (312)
++-....+++++|+++++++...++.|.+|+.. ++.+..+. ++...+..+++. ++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455789999999999988888889999999977 55544443 234578899994 67776666533 7899999
Q ss_pred eCCCCceeeeeee-cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee--ecCcCeEEEEEccCCCEEEEee
Q 021459 92 DARTPFDCLKTLR-GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR--AHSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 92 d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
|.. + +.+..+. .+......++++|+++++++...++.|.+||.. ++....+. .+...+..++++|+++++++..
T Consensus 106 d~~-g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 106 NQY-G-QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CTT-S-CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CCC-C-cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 943 3 2333332 234567899999999988887778899999965 44444443 2334578999999999888888
Q ss_pred CCCeEEEEeCCCCceeeEcccCC-CCcEEEEEECCCCCEEEEEecCC-eEEEEEcCCCcEEEEEEccCCceeEEEEEEEc
Q 021459 169 HDGTCKIWDAGEGACLKTLIDDK-DPAVSFAKFSPNGKFILVGTLDS-TLKLWNYSAGKFLKIYTGHTNKKYCITSTFSV 246 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
.++.|.+||.. +..+..+.... ......++++++|+++++...++ .|.+||. +++.+..+..+.....+....+.
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~- 259 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM- 259 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE-
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC-
Confidence 89999999974 44444443221 23466788999999888887776 9999995 56666666554333222333333
Q ss_pred cCCcEEEEeecCCeEEEEECCch
Q 021459 247 TNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 247 ~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
++++++++ +.++.|++|+....
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccc
Confidence 57877777 57999999998653
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=3.5e-18 Score=141.71 Aligned_cols=271 Identities=10% Similarity=0.048 Sum_probs=184.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
..|.++.|+|++..++..+.++.++.| ..+....+..+...+.+++|++++++++++..++.|.+||..+.. ....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-IKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-EEEE
Confidence 346778899988888777788889999 344555666677778999999999988888889999999987643 2222
Q ss_pred eecccccEEEEEEecCCCEEEEeecC----CcEEEEEcCCCeEEEEee--ecCcCeEEEEEccCCCEEEEeeC------C
Q 021459 103 LRGHSDFVFCVNFNPQSNLIVSGSFD----ESIRIWEVKTGKCTRVIR--AHSMPVTSVHFNRDGSLIVSGSH------D 170 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d 170 (312)
...+...+.+++++|+++++++...+ +.|.+||..+++....+. .+...+..++++|+|+++++... .
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 22455678999999999888777665 689999998776543332 23456889999999988776653 3
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCC-CcEEEEE-----EccCCceeEEEEE
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSA-GKFLKIY-----TGHTNKKYCITST 243 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~-~~~~~~~-----~~~~~~~~~~~~~ 243 (312)
+.|..+|..+++... +.. .......++++|+++.|+++ +.++.|.+||... +..+..+ ....... .....
T Consensus 162 ~~l~~~~~~~~~~~~-~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~-~~~~i 238 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTP-IIQ-NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHE-GPDSC 238 (333)
T ss_dssp EEEEEECTTSCCEEE-EEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSS-EEEEE
T ss_pred ceEEEEeCCCCEEEE-eec-CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCC-CCCce
Confidence 567777765544322 211 12235667899999866544 5678999999863 3322211 1111111 12223
Q ss_pred EEccCCcEEEEeecCCeEEEEECCchheeecccCCcc------ceEEEEEcCCCceEEEeeecC
Q 021459 244 FSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTD------SVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 244 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~~p~~~~l~~~~~dg 301 (312)
...+++.++++...++.|.+||.. ++.+..+..+.. .+.+++|+|+++.|..++.++
T Consensus 239 ~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 239 CIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 344678888887788999999984 444444443322 688999999987776666553
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.84 E-value=3.8e-18 Score=142.29 Aligned_cols=258 Identities=13% Similarity=0.159 Sum_probs=167.8
Q ss_pred cceEEEEECCCCCEEEEEe---------CCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC---C--eE
Q 021459 23 RAVSCVKFSNDGTLLASAS---------LDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD---R--TL 88 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~---------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~v 88 (312)
..+..+++ ||+.++... .++.|.+|+..+++.. .+ ..+..++|+|||++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 35667778 888877642 2567899999887643 23 467889999999999887654 3 47
Q ss_pred EEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecC---------------------------CcEEEEEcCCCeE
Q 021459 89 RIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD---------------------------ESIRIWEVKTGKC 141 (312)
Q Consensus 89 ~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~~wd~~~~~~ 141 (312)
.+|++.++. ... +..+.. +..++|+||++.|+.++.+ ..|.+||+.+++.
T Consensus 88 ~~~~~~~g~-~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 88 WVADLETLS-SKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEETTTTE-EEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEECCCCc-eEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 777887643 222 222334 8899999999988877642 4689999998876
Q ss_pred EEEeeecCcCeEEEEEccCCCEEEEeeCCC-------eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecC-
Q 021459 142 TRVIRAHSMPVTSVHFNRDGSLIVSGSHDG-------TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLD- 213 (312)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 213 (312)
+..+.. . .+..+.|+|+| +++++..+. ...+|.+.+++ ...+... .... .++|+|+.|+..+.+
T Consensus 165 ~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~--~~~~--~~spdg~~l~~~~~~~ 236 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK--VSFY--AVDSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE--ESEE--EEEECSSCEEEEECCS
T ss_pred EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC--ccee--eECCCCCEEEEEEccc
Confidence 444444 3 78899999999 777775542 33444333443 3333322 2232 238999988877644
Q ss_pred -------CeEEEEEcCCCcEEEEEEccCCceeEEEE-EEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEE
Q 021459 214 -------STLKLWNYSAGKFLKIYTGHTNKKYCITS-TFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISV 285 (312)
Q Consensus 214 -------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 285 (312)
..|.+|| +++.......+.. .+.. ..+. ++ ++++++.+|.+++| +.+++. ..+..+...|.++
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~~~~~---~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~ 307 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILDEVDR---GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGF 307 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESSTTCCS---EEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEE
T ss_pred cCCccccceEEEEC--CCceEeccccCCc---ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEee
Confidence 3678887 5554333222222 2221 2334 66 88999999999999 874443 3444457789999
Q ss_pred EEcCCCceEEEeeecCCeeEEEEee
Q 021459 286 TCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 286 ~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+|+| ..+++++.++ ...+||.+
T Consensus 308 ~~s~--~~~~~~~~~~-~~~~l~~~ 329 (347)
T 2gop_A 308 DVDE--IVVYLKETAT-RLRELFTW 329 (347)
T ss_dssp EESS--SEEEEEECSS-SCCEEEEE
T ss_pred eeeC--cEEEEEcCCC-ChHHheEe
Confidence 9999 5666666443 23367765
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=2e-17 Score=137.01 Aligned_cols=243 Identities=12% Similarity=0.139 Sum_probs=171.2
Q ss_pred cCCEEEEEEccCCCeEEEEcCC------------------------CeEEEEeCCCCceeeeeee-cccccEEEEEEecC
Q 021459 64 SEGISDLAWSSDSHYICSASDD------------------------RTLRIWDARTPFDCLKTLR-GHSDFVFCVNFNPQ 118 (312)
Q Consensus 64 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~v~~wd~~~~~~~~~~~~-~~~~~v~~~~~~~~ 118 (312)
-..+..++++|+|+++++...+ +.|.+||..++. .+.... ++......++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE-ILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC-EEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe-EEeccCCCccCCceEEEECCC
Confidence 3568999999999988887776 479999987653 333332 34456788999999
Q ss_pred CCEEEEeecCCcEEEEEcCCCe-EEEEee---------ecCcCeEEEEEcc-CCCEEEEee-CCCeEEEEeCCCCceeeE
Q 021459 119 SNLIVSGSFDESIRIWEVKTGK-CTRVIR---------AHSMPVTSVHFNR-DGSLIVSGS-HDGTCKIWDAGEGACLKT 186 (312)
Q Consensus 119 ~~~l~s~~~dg~i~~wd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~ 186 (312)
++++++...++.|++||..... .+..+. .+......++++| ++.++++.+ .++.|++|| .++..+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9988888888999999976442 333331 2233578999999 888888886 689999999 45655554
Q ss_pred cccCC---------CCcEEEEEECCC-CCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEcc------CCc
Q 021459 187 LIDDK---------DPAVSFAKFSPN-GKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVT------NGK 250 (312)
Q Consensus 187 ~~~~~---------~~~~~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 250 (312)
+.... ......++++|+ +.++++...++.|++||..+++.+..+.............+. + +++
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-pg~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI-PGFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE-TTEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeec-CCEEEEeCCC
Confidence 42211 122566889998 777777778899999999888888777433221111222232 3 233
Q ss_pred EEEEeecCCeEEEEECCchheeecc---cCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 251 YIVSGSEDNCVYVWDLQQKTMIQKL---DGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 251 ~l~~~~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
..++...++.|.+||..+++.+..+ .++...+..|+++|++..+++.. ++.+|++|+.+
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~--~~~~I~~~~~~ 321 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA--HTNTVWKFTLT 321 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES--SSCCEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC--CCCEEEEEeCC
Confidence 3333445668999999988887776 35667799999999997776665 45689999874
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=5.8e-18 Score=141.93 Aligned_cols=264 Identities=14% Similarity=0.164 Sum_probs=183.9
Q ss_pred eecccccceEEEEECCCCCEEEEEe----------CCCeEEEEeCCCcceEEEeeec------cCCEEEEEEccCCCeEE
Q 021459 17 TLTAHSRAVSCVKFSNDGTLLASAS----------LDKTVIIWSASSLALVHRFVGH------SEGISDLAWSSDSHYIC 80 (312)
Q Consensus 17 ~~~~h~~~v~~~~~s~~~~~l~t~~----------~d~~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~ 80 (312)
++..+..+ .++|+|||++++++. .++.|.+||..+++.+..+... ......++++|+|++|+
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 44444445 899999999998876 3678999999998888777643 23456799999999999
Q ss_pred EEcC--CCeEEEEeCCCCceeeee-eecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCC-CeEEEE------eeecC
Q 021459 81 SASD--DRTLRIWDARTPFDCLKT-LRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKT-GKCTRV------IRAHS 149 (312)
Q Consensus 81 ~~~~--d~~v~~wd~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~-~~~~~~------~~~~~ 149 (312)
++.. ++.|.+||+.+. +.+.. +.. .+ ...+.+.|++ ..+++.+.||.+.+|++.. ++.... +....
T Consensus 124 v~n~~~~~~v~v~d~~~~-~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKG-DYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEESSSEEEEEEETTTT-EEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EECCCCCCeEEEEECCCC-cEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 8864 578999999875 44444 332 11 2224566765 6778888999999999865 544311 11122
Q ss_pred cCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCcee--eEcc--c----CC---CCcEEEEEECCCCCEEEEEec------
Q 021459 150 MPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACL--KTLI--D----DK---DPAVSFAKFSPNGKFILVGTL------ 212 (312)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~--~----~~---~~~~~~~~~~~~~~~l~~~~~------ 212 (312)
.++ .+.+++++..++..+.++.+.++|+...... ..+. . .. ......++++|+++.+.++..
T Consensus 201 ~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~ 279 (361)
T 2oiz_A 201 DPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEG 279 (361)
T ss_dssp SCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTT
T ss_pred Cce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcc
Confidence 222 2334577777777788899999998654321 1110 0 00 000112468999888777643
Q ss_pred -----CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCch--heeecccCCccceEEE
Q 021459 213 -----DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK--TMIQKLDGHTDSVISV 285 (312)
Q Consensus 213 -----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l 285 (312)
.+.|.+||..+++.+..+..+. ...+ .+ .+++++|++++. +.|.+||..++ +.+..+..+......+
T Consensus 280 ~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i--a~-spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~ 353 (361)
T 2oiz_A 280 THKFPAAEIWVMDTKTKQRVARIPGRD--ALSM--TI-DQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQV 353 (361)
T ss_dssp CTTCCCSEEEEEETTTTEEEEEEECTT--CCEE--EE-ETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEE
T ss_pred cccCCCceEEEEECCCCcEEEEEecCC--eeEE--EE-CCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEE
Confidence 3589999999999988887665 3333 33 367888888877 99999999999 8888877777788999
Q ss_pred EEcCCCc
Q 021459 286 TCHPTEN 292 (312)
Q Consensus 286 ~~~p~~~ 292 (312)
+++|+|.
T Consensus 354 ~~~p~G~ 360 (361)
T 2oiz_A 354 QFHPVGG 360 (361)
T ss_dssp EECCCSC
T ss_pred EecCCCC
Confidence 9999985
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=2.2e-18 Score=157.90 Aligned_cols=266 Identities=14% Similarity=0.124 Sum_probs=169.0
Q ss_pred EEEEECCCCCEEEEEeCC---------CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCC
Q 021459 26 SCVKFSNDGTLLASASLD---------KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTP 96 (312)
Q Consensus 26 ~~~~~s~~~~~l~t~~~d---------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~ 96 (312)
..++|||||++|+.++.+ +.+.+||+.+++.. .+..|...+...+|+|||+.||.+ .++.|++|++.++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 448899999999998876 56679999988754 466677889999999999999988 4789999998765
Q ss_pred ceeeeeeecccccE-----------------EEEEEecCCCEEEEeecCC------------------------------
Q 021459 97 FDCLKTLRGHSDFV-----------------FCVNFNPQSNLIVSGSFDE------------------------------ 129 (312)
Q Consensus 97 ~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg------------------------------ 129 (312)
.....+..++...+ ..+.|+|||+.|+..+.|.
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 43222222333222 3488999999998875321
Q ss_pred ------cEEEEEcCC---C---eEEEEeee------cCcCeEEEEEccCCCEEEEeeC----CCeEEEEeCCCCc----e
Q 021459 130 ------SIRIWEVKT---G---KCTRVIRA------HSMPVTSVHFNRDGSLIVSGSH----DGTCKIWDAGEGA----C 183 (312)
Q Consensus 130 ------~i~~wd~~~---~---~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~----~ 183 (312)
.|++||+.+ + +.. .+.. +...+..++|+|||+.++.... +..|.+||+.+++ +
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred CcCCeeEEEEEECCCCCCCCcceEE-EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 478899988 6 332 2322 5667889999999996665433 3379999998876 2
Q ss_pred e--eEcc-cCCCCc-----EEEEEECCCCCEEE-EEec-C--CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcE
Q 021459 184 L--KTLI-DDKDPA-----VSFAKFSPNGKFIL-VGTL-D--STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKY 251 (312)
Q Consensus 184 ~--~~~~-~~~~~~-----~~~~~~~~~~~~l~-~~~~-d--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
. ..+. ..+... .....|+|||+.++ ..+. + ..|++||..+++...+..+ .-. +.......++.+
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~---v~~~~~~d~~~i 377 (740)
T 4a5s_A 302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWE---VIGIEALTSDYL 377 (740)
T ss_dssp CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSC---EEEEEEECSSEE
T ss_pred eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEE---EEEEEEEeCCEE
Confidence 1 1110 111111 12456999999877 5543 3 4688889877665443322 211 111122233344
Q ss_pred EEEeec----CC--eEEEEECCchheeeccc----CCccceEEEEEcCCCceEEEee
Q 021459 252 IVSGSE----DN--CVYVWDLQQKTMIQKLD----GHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 252 l~~~~~----dg--~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
+++++. .+ .|...++........+. +.........|+|++++++...
T Consensus 378 ~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 378 YYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred EEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 445544 23 44445555443322232 2345678999999998776543
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1.1e-18 Score=158.02 Aligned_cols=249 Identities=16% Similarity=0.161 Sum_probs=162.0
Q ss_pred eeecccccceE---------EEEEC--CCCCE-EEEEeC-CCeEEEEeCC--C-cceEEEeee-----ccCCEEEEEEcc
Q 021459 16 KTLTAHSRAVS---------CVKFS--NDGTL-LASASL-DKTVIIWSAS--S-LALVHRFVG-----HSEGISDLAWSS 74 (312)
Q Consensus 16 ~~~~~h~~~v~---------~~~~s--~~~~~-l~t~~~-d~~i~vw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~ 74 (312)
+.+..|...+. ...|+ |||+. |+.++. +..|.+++.. + ++ ...+.. |...+..++|+|
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC
Confidence 34556666655 56565 99998 776554 5667777765 2 33 334444 566788999999
Q ss_pred CCCeEEEEcCC----------CeEEEEeCCCCc----eeeeeee-cccccEEEEEEecCCCEEEEeecCC--------cE
Q 021459 75 DSHYICSASDD----------RTLRIWDARTPF----DCLKTLR-GHSDFVFCVNFNPQSNLIVSGSFDE--------SI 131 (312)
Q Consensus 75 ~~~~l~~~~~d----------~~v~~wd~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg--------~i 131 (312)
||+.|++++.+ ..|++||+.+.. .....+. .+...+..++|+|||+.|+.++.++ .|
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 99999988876 589999987610 1233444 4556778899999999998877553 79
Q ss_pred EEEEcC-CC---eEEEEeeecCcCeEEEEEccCCCEEEEeeCCC--eEEEEeCCCCceeeEcccCCCCc--------EEE
Q 021459 132 RIWEVK-TG---KCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDG--TCKIWDAGEGACLKTLIDDKDPA--------VSF 197 (312)
Q Consensus 132 ~~wd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~--------~~~ 197 (312)
++||+. ++ +.......+...+..+.|+|||++++++..++ .|.+||+.+++.. .+....... +..
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCS
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee-ecccccccccCccccccCce
Confidence 999998 56 44444445567889999999999888888888 6667776555533 222221111 334
Q ss_pred EEECCCCCEEEEEecCCeEEEE--EcCCCcEEEEEEccCCceeEEEEEEEccCCcEE-EEeecCC--eEEEEECCchhe
Q 021459 198 AKFSPNGKFILVGTLDSTLKLW--NYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYI-VSGSEDN--CVYVWDLQQKTM 271 (312)
Q Consensus 198 ~~~~~~~~~l~~~~~d~~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg--~i~iwd~~~~~~ 271 (312)
+.++|++.++++++. +.+++| |..+++ +..+..+..... ..+....+.++ ++++.+. .|.++|+.+++.
T Consensus 299 ~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 299 FAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWA---ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEE---EEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEE---EEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 678899999999888 999998 554454 455554433222 22122223333 3444444 455567655543
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=5e-18 Score=142.31 Aligned_cols=266 Identities=15% Similarity=0.127 Sum_probs=178.1
Q ss_pred CCCEEEEEe------CCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcC----------CCeEEEEeCCCC
Q 021459 33 DGTLLASAS------LDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASD----------DRTLRIWDARTP 96 (312)
Q Consensus 33 ~~~~l~t~~------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~v~~wd~~~~ 96 (312)
++++++... .|+.|.+||..+++.+..+..+..+ .++|+|++++++++.. ++.|.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555555543 3679999999999888877766554 8999999999998862 567999998764
Q ss_pred ceeeeeeecc------cccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCC-CEEEE
Q 021459 97 FDCLKTLRGH------SDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDG-SLIVS 166 (312)
Q Consensus 97 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~ 166 (312)
+.+..+... ......++++||+++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++
T Consensus 92 -~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 92 -TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMT 168 (361)
T ss_dssp -CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEE
T ss_pred -cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEE
Confidence 334444321 223456889999999998875 57899999999987766 44322 2335567765 67788
Q ss_pred eeCCCeEEEEeCCC-CceeeEc-----ccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE--EEEEEccC----
Q 021459 167 GSHDGTCKIWDAGE-GACLKTL-----IDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF--LKIYTGHT---- 234 (312)
Q Consensus 167 ~~~d~~i~iwd~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~---- 234 (312)
.+.||.+.+|+... ++..... .......+ .+..++++..++..+.++.|.++|+..... +..+....
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 88999999998754 4333111 11111111 122356677777778899999999865542 22221100
Q ss_pred --Cc-eeE-EEEEEEccCCcEEEEeec-----------CCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeee
Q 021459 235 --NK-KYC-ITSTFSVTNGKYIVSGSE-----------DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGL 299 (312)
Q Consensus 235 --~~-~~~-~~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~ 299 (312)
.. ... ....+. ++++.+.++.. ++.|.+||+.+.+.+..+..+. +.+++|+|++++|++++
T Consensus 248 ~~~~~p~g~~~~a~~-~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n- 323 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLH-RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLD- 323 (361)
T ss_dssp HTTCEECCSSCEEEE-TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEEC-
T ss_pred ccccccCCeeEEEEe-cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeC-
Confidence 00 000 001233 55555554432 3589999999999999888776 89999999999888776
Q ss_pred cCCeeEEEEee
Q 021459 300 DGDRTVRVWVQ 310 (312)
Q Consensus 300 dgd~~v~iw~~ 310 (312)
+ ++|.+|+.
T Consensus 324 -~-~~v~v~D~ 332 (361)
T 2oiz_A 324 -G-GNVNVYDI 332 (361)
T ss_dssp -S-SCEEEEEC
T ss_pred -C-CeEEEEEC
Confidence 3 79999986
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=7.4e-17 Score=130.82 Aligned_cols=239 Identities=15% Similarity=0.219 Sum_probs=166.3
Q ss_pred ccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeee------cccccEEEEEEe-cCCCEEEEeec-CCcEEEE
Q 021459 63 HSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLR------GHSDFVFCVNFN-PQSNLIVSGSF-DESIRIW 134 (312)
Q Consensus 63 ~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~s~~~-dg~i~~w 134 (312)
+...+.+++++++++++++...++.|.+||.... .+..+. ++......+++. ++++++++... ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 4456889999999998888888999999997642 233332 233567889994 66666666543 7899999
Q ss_pred EcCCCeEEEEeee-cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEccc-CCCCcEEEEEECCCCCEEEEEec
Q 021459 135 EVKTGKCTRVIRA-HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLID-DKDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 135 d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
| .+++....+.. +...+..++++|+++++++...++.|.+||.. ++....+.. ........++++++|+++++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 55666555532 33467899999999988888888999999964 444444321 22334677889999998887778
Q ss_pred CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC-eEEEEECCchheeecccCCc--cceEEEEEcC
Q 021459 213 DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN-CVYVWDLQQKTMIQKLDGHT--DSVISVTCHP 289 (312)
Q Consensus 213 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~p 289 (312)
++.|++||. +++.+..+............ ...+++.++++...++ .|.+||.. ++.+..+..+. ..+.+++++|
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i-~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNYPIGV-GINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCSEEEE-EECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEET
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCCCcEE-EECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECC
Confidence 899999997 45555555433211112222 3346788888888776 99999964 44555554433 3478999999
Q ss_pred CCceEEEeeecCCeeEEEEeec
Q 021459 290 TENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 290 ~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+++.+++ + .+++|++|++.
T Consensus 261 ~g~l~vs-~--~~~~v~v~~~~ 279 (286)
T 1q7f_A 261 DGSVVLA-S--KDYRLYIYRYV 279 (286)
T ss_dssp TTEEEEE-E--TTTEEEEEECS
T ss_pred CCcEEEE-C--CCCeEEEEEcc
Confidence 9976665 4 35799999874
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=3.7e-15 Score=121.22 Aligned_cols=271 Identities=8% Similarity=0.011 Sum_probs=185.2
Q ss_pred cccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEE-eeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc
Q 021459 19 TAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHR-FVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 19 ~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 97 (312)
..+...+.+++++++|++.++...++.|.+|+.. ++.... ...+...+..+++++++.++++...++.|..||....
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~- 88 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI- 88 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-
Confidence 3456789999999999988877668899999988 443221 1224567899999999998888777889999997632
Q ss_pred eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCCCEEEEeeCCCeEEEE
Q 021459 98 DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIW 176 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (312)
............+..++++++++++++...++.|..||. +++.... .......+..++++++++++++...++.|..|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 111112223456788999999988887777889999998 5544332 22234568899999999888877778899999
Q ss_pred eCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEee
Q 021459 177 DAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGS 256 (312)
Q Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 256 (312)
|. +++...............+.+++++.++++...++.|.+||. +++... +........ .......+++.+.++..
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~-~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNAR-PHAITAGAGIDLWFTEW 243 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCC-EEEEEECSTTCEEEEET
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCC-ceeEEECCCCCEEEecc
Confidence 98 655443212222344667789999987777666889999998 666433 322211111 22223346677777766
Q ss_pred cCCeEEEEECCchhee-ecccCCccceEEEEEcCCCceEEEee
Q 021459 257 EDNCVYVWDLQQKTMI-QKLDGHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 257 ~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
.++.|..||.. ++.. ..+..+...+.++++ +++..+++.+
T Consensus 244 ~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 244 GANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp TTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred CCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence 78999999984 3322 123445567899999 8887766654
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=3.5e-18 Score=144.66 Aligned_cols=258 Identities=14% Similarity=0.078 Sum_probs=167.6
Q ss_pred EeCCCcceEEEeeeccCCEEE-----EEEccCCCeEEEEcC-CC--eEEEEeCCCCceeeeeeecccccEEEEEEecCCC
Q 021459 49 WSASSLALVHRFVGHSEGISD-----LAWSSDSHYICSASD-DR--TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSN 120 (312)
Q Consensus 49 w~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~--~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (312)
.+..++..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.++ +......++...+..+.|+||++
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-VATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC-EEEECCCSSCBCSSSCEECTTSS
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC-ceEEeeeCCCCCccceEEcCCCC
Confidence 366667777777777666655 889999999988877 66 4888898775 33344445555555678999999
Q ss_pred EEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEE--EEccCCCEEEEe----------------------eCCCeEEEE
Q 021459 121 LIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSV--HFNRDGSLIVSG----------------------SHDGTCKIW 176 (312)
Q Consensus 121 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~----------------------~~d~~i~iw 176 (312)
.|+.++.++.|++||+.+++.......+...+... .++|++++++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99999999999999999998776666555444333 348999988742 244679999
Q ss_pred eCCCCceeeEcccCCCCcEEEEEECC-CCCEEEEEecC------CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCC
Q 021459 177 DAGEGACLKTLIDDKDPAVSFAKFSP-NGKFILVGTLD------STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNG 249 (312)
Q Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
|+.+++... +.. ....+....|+| +|+.|+....+ ..|.++|...++... +..+..... +....+.+++
T Consensus 174 d~~~g~~~~-l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~-~~~~~~spdg 249 (388)
T 3pe7_A 174 DLKTGESTV-ILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGES-CTHEFWVPDG 249 (388)
T ss_dssp ETTTCCEEE-EEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEE-EEEEEECTTS
T ss_pred ECCCCceEE-eec-CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCcc-cccceECCCC
Confidence 998876433 222 234467788999 99988877653 378888876654433 222222112 2223345778
Q ss_pred cEEEEeec-C----CeEEEEECCchhe--eecccCCccc---eEEEEEcCCCceEEEeee-------cCCeeEEEEeec
Q 021459 250 KYIVSGSE-D----NCVYVWDLQQKTM--IQKLDGHTDS---VISVTCHPTENKIASAGL-------DGDRTVRVWVQD 311 (312)
Q Consensus 250 ~~l~~~~~-d----g~i~iwd~~~~~~--~~~~~~h~~~---v~~l~~~p~~~~l~~~~~-------dgd~~v~iw~~~ 311 (312)
+.|+..+. + +.|.+||+.+++. +..+.++... ...++|+|+++.|+.... +++..|++|+.+
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 250 SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 86655332 2 2499999987653 3333331111 112379999998886542 456789998864
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=8.2e-17 Score=146.86 Aligned_cols=274 Identities=10% Similarity=0.063 Sum_probs=177.0
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcceEEEee------eccCCEEEEEEccCCCeEEEEcCCC-----eEEEEeCCC
Q 021459 32 NDGTLLASASLD-----KTVIIWSASSLALVHRFV------GHSEGISDLAWSSDSHYICSASDDR-----TLRIWDART 95 (312)
Q Consensus 32 ~~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~~wd~~~ 95 (312)
|+|++++....+ +.+.+.+...++....+. +|...+..++|+|||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 889887755432 234444544443321111 2334578999999999998775543 899999988
Q ss_pred CceeeeeeecccccEEEEEEecCCCEEEEeecCCc----------------EEEEEcCCCeEE--EEeee--cCcCeEEE
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDES----------------IRIWEVKTGKCT--RVIRA--HSMPVTSV 155 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~----------------i~~wd~~~~~~~--~~~~~--~~~~v~~~ 155 (312)
+......... ..+..++|+||++.|+.++.++. |++|++.+++.. ..+.. +...+..+
T Consensus 161 g~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 6432222221 22567899999999998887765 999999877532 22222 34457789
Q ss_pred EEccCCCEEEEeeC-----CCeEEEEeCCC------Cc-eeeEcccCCCCcEEEEEECCCCCEEEEEecC----CeEEEE
Q 021459 156 HFNRDGSLIVSGSH-----DGTCKIWDAGE------GA-CLKTLIDDKDPAVSFAKFSPNGKFILVGTLD----STLKLW 219 (312)
Q Consensus 156 ~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~v~ 219 (312)
.|+|||++++..+. +..+.+||+.+ +. ....+........ . .++|+|+.|+..+.. +.|.+|
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-E-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 99999999887664 56899999875 42 2344433333332 2 478889888776543 369999
Q ss_pred EcCCCc--EEEEEEccCCceeEEEEEEEccCCcEEEEeecCCe--EEEEECCchheeecccCCccceEEEEEcCCCceEE
Q 021459 220 NYSAGK--FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNC--VYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIA 295 (312)
Q Consensus 220 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~ 295 (312)
|+.++. ....+..+..........+. +++.++++...+|. |.+||+.+++....+..+...+..++++|++..++
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 997764 12333334332111122333 56778888888885 55667766666677777777889999999987666
Q ss_pred Ee--eecCCeeEEEEee
Q 021459 296 SA--GLDGDRTVRVWVQ 310 (312)
Q Consensus 296 ~~--~~dgd~~v~iw~~ 310 (312)
.. |.....+|.+|++
T Consensus 396 ~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEECSSCCCEEEEEET
T ss_pred EEEeCCCCCCEEEEEEC
Confidence 44 3334467888775
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=1.2e-16 Score=145.79 Aligned_cols=245 Identities=12% Similarity=0.120 Sum_probs=165.8
Q ss_pred cccceEEEEECCCCCEEEEEeCCC-----eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe--------
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDK-----TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRT-------- 87 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~-----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------- 87 (312)
|...+..++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445788999999999998765433 8999999998876533322 23667999999999998887765
Q ss_pred --------EEEEeCCCCce---eeeeeecccccEEEEEEecCCCEEEEeec-----CCcEEEEEcCC------Ce-EEEE
Q 021459 88 --------LRIWDARTPFD---CLKTLRGHSDFVFCVNFNPQSNLIVSGSF-----DESIRIWEVKT------GK-CTRV 144 (312)
Q Consensus 88 --------v~~wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~~wd~~~------~~-~~~~ 144 (312)
|++|++.++.. .+.....+...+..+.|+||+++|+..+. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999987542 22222334556788999999999887764 56799999986 43 3445
Q ss_pred eeecCcCeEEEEEccCCCEEEEeeCC----CeEEEEeCCCCce--eeEcccCCC-CcEEEEEECCCCCEEEEEecCCe--
Q 021459 145 IRAHSMPVTSVHFNRDGSLIVSGSHD----GTCKIWDAGEGAC--LKTLIDDKD-PAVSFAKFSPNGKFILVGTLDST-- 215 (312)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~-- 215 (312)
+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+.. ..+..+.+++++.++++...++.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 5555555544 478888877766543 3699999877631 233433333 35666778877778888888874
Q ss_pred EEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEE-Ee---ecCCeEEEEECCchh
Q 021459 216 LKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIV-SG---SEDNCVYVWDLQQKT 270 (312)
Q Consensus 216 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~dg~i~iwd~~~~~ 270 (312)
|++||+.+++.+..+..+... +......+++..++ +. ...+.|..||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~---v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGS---VVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSE---EEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCce---EEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 566777677766666554322 22222234565544 32 245889999997765
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=6.3e-16 Score=136.19 Aligned_cols=274 Identities=11% Similarity=0.122 Sum_probs=190.3
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC--CCceeeeeeeccccc
Q 021459 32 NDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR--TPFDCLKTLRGHSDF 109 (312)
Q Consensus 32 ~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~--~~~~~~~~~~~~~~~ 109 (312)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+|||+++++++.|+.|.+||+. +. +.+..+.... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G~-~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIGS-E 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECCS-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecCC-C
Confidence 4455677778889999999999998887764 3467799999999999999999999999995 43 4455554332 3
Q ss_pred EEEEEEe----cCCCEEEEeec-CCcEEEEEcCCCeEEEEeeec----------Cc-CeEEEEEccCCCE-EEEeeCCCe
Q 021459 110 VFCVNFN----PQSNLIVSGSF-DESIRIWEVKTGKCTRVIRAH----------SM-PVTSVHFNRDGSL-IVSGSHDGT 172 (312)
Q Consensus 110 v~~~~~~----~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~-l~~~~~d~~ 172 (312)
-..++|+ ||++++++++. +++|.++|..+.+.+..+... .. .+..+..++++.. ++....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 4678999 69998877765 489999999998887765432 12 4677888887654 445556799
Q ss_pred EEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcEEEEEEc-cCCce--eEEEEEEEccC
Q 021459 173 CKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKFLKIYTG-HTNKK--YCITSTFSVTN 248 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~ 248 (312)
|.++|......+....-..........|+|++++++++. .++.|.++|..+++.+..+.. ..... ... .+..++
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~--~~~~p~ 399 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA--NFVHPT 399 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE--EEEETT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce--eeECCC
Confidence 999998765322211112233455677999999887765 578999999999987776654 21110 011 123354
Q ss_pred -CcEEEEee-cCCeEEEEECCc-------hheeecccCCccceEEEEEcCCCceEEEeee-cC----CeeEEEEee
Q 021459 249 -GKYIVSGS-EDNCVYVWDLQQ-------KTMIQKLDGHTDSVISVTCHPTENKIASAGL-DG----DRTVRVWVQ 310 (312)
Q Consensus 249 -~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~-dg----d~~v~iw~~ 310 (312)
+...++.. .++.|.++|... .+.++.+......-..++.||+++++.+... .. ..+|.+++.
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 45555553 568999999976 5566776654444456789999988776542 11 237777775
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=5.4e-16 Score=126.39 Aligned_cols=242 Identities=11% Similarity=0.060 Sum_probs=166.8
Q ss_pred eeeecccccceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGT-LLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
+..+..+.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+..++++++|+++++...++.|.+||.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 345556677788999999998 7788888899999999877 4556667778999999999998888777789999998
Q ss_pred CCCceeeeeeecc----cccEEEEEEecCCCEEEE----eec-------------CCcEEEEEcCCCeEEEEeeecCcCe
Q 021459 94 RTPFDCLKTLRGH----SDFVFCVNFNPQSNLIVS----GSF-------------DESIRIWEVKTGKCTRVIRAHSMPV 152 (312)
Q Consensus 94 ~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~~wd~~~~~~~~~~~~~~~~v 152 (312)
.++.. ....... ...+..++++|+++++++ +.. .+.|..++.. ++. ..+..+....
T Consensus 98 ~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEW-ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKP 174 (296)
T ss_dssp TTCCE-EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSE
T ss_pred CCCcE-EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCC
Confidence 65432 1111111 123567899999998887 331 2456666655 443 3344445567
Q ss_pred EEEEEccCCCEEEEeeCCCeEEEEeCC-CCce---eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEE
Q 021459 153 TSVHFNRDGSLIVSGSHDGTCKIWDAG-EGAC---LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLK 228 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 228 (312)
..++|+|+++.+++.+.++.|.+||+. ++.. ...+ .........++++++|+++++. ++.|.+||.. ++.+.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 899999999988777788999999986 4443 2222 2222233456799999866655 8899999986 77777
Q ss_pred EEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCch
Q 021459 229 IYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
.+..+.. ...+ .+..++++.|..++.+| +.-++..+.
T Consensus 251 ~~~~~~~-~~~~--~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 251 RVLTPQT-TSNL--CFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEECSSC-CCEE--EEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred EEECCCC-ceeE--EEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 6665544 3333 34356777887777764 445555543
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1.7e-15 Score=123.37 Aligned_cols=230 Identities=14% Similarity=0.082 Sum_probs=160.5
Q ss_pred EEeeeccCCEEEEEEccCCC-eEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEc
Q 021459 58 HRFVGHSEGISDLAWSSDSH-YICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEV 136 (312)
Q Consensus 58 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~ 136 (312)
..+..+.....+++|+|+++ +++++..++.|..||..+. ...+..+...+.+++++|+++++++...++.|.+||.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 34444556678999999998 7788888999999998864 3445556677899999999998877777789999999
Q ss_pred CCCeEEEEeeec----CcCeEEEEEccCCCEEEE----ee-------------CCCeEEEEeCCCCceeeEcccCCCCcE
Q 021459 137 KTGKCTRVIRAH----SMPVTSVHFNRDGSLIVS----GS-------------HDGTCKIWDAGEGACLKTLIDDKDPAV 195 (312)
Q Consensus 137 ~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (312)
.+++........ ...+..++++|+|+++++ |+ ..+.|..++.. ++. ..+. ......
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~-~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPI-RDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEE-CCCSSE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEee-cCCCCC
Confidence 888754433221 124567999999998887 33 13466666655 332 2222 223445
Q ss_pred EEEEECCCCCEEEEEecCCeEEEEEcC-CCcE---EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe
Q 021459 196 SFAKFSPNGKFILVGTLDSTLKLWNYS-AGKF---LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM 271 (312)
Q Consensus 196 ~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 271 (312)
..++++|+++.+++.+.++.|++||+. +++. ...+..+......+ ...++|++.++. ++.|.+||.. ++.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i---~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL---RVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE---EEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE---EECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 678899999998777778999999986 4544 23331111111222 233677766665 7889999986 566
Q ss_pred eecccCCccceEEEEE-cCCCceEEEeeec
Q 021459 272 IQKLDGHTDSVISVTC-HPTENKIASAGLD 300 (312)
Q Consensus 272 ~~~~~~h~~~v~~l~~-~p~~~~l~~~~~d 300 (312)
+..+..+.. +.+++| .|+++.|.+++.+
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred EEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 667766666 899999 5888888888754
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=9.6e-17 Score=146.07 Aligned_cols=271 Identities=12% Similarity=0.032 Sum_probs=170.1
Q ss_pred CCCCCEEEEEeCCC-----eEEEEeCCCcceEEEee------eccCCEEEEEEccCCCeEE-----EEcCCCeEEEEeCC
Q 021459 31 SNDGTLLASASLDK-----TVIIWSASSLALVHRFV------GHSEGISDLAWSSDSHYIC-----SASDDRTLRIWDAR 94 (312)
Q Consensus 31 s~~~~~l~t~~~d~-----~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~-----~~~~d~~v~~wd~~ 94 (312)
+|+|++++....++ .+.+.+...++....+. +|...+..++|+|||++|+ .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 47898887765543 34444544443322221 3444688999999999998 34445789999998
Q ss_pred CCcee-eeeeecccccEEEEEEecCCCEEEEeecCCc-------------EEEEEcCCCeE--EEEe--eecCcCeEEEE
Q 021459 95 TPFDC-LKTLRGHSDFVFCVNFNPQSNLIVSGSFDES-------------IRIWEVKTGKC--TRVI--RAHSMPVTSVH 156 (312)
Q Consensus 95 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-------------i~~wd~~~~~~--~~~~--~~~~~~v~~~~ 156 (312)
++... ...+... ....++|+||++.|+.++.+.. |++|++.+++. ...+ ..+...+..+.
T Consensus 156 tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 76432 1112111 1157899999999999888766 99999987752 2222 23445688999
Q ss_pred EccCCCEEEEeeCCC----eEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec----CCeEEEEEcCCCcE--
Q 021459 157 FNRDGSLIVSGSHDG----TCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL----DSTLKLWNYSAGKF-- 226 (312)
Q Consensus 157 ~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~-- 226 (312)
|+|||++++..+.++ .+.++|..++. ...+.......... .+ ++|. ++..+. ++.|.+||+.++..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~-~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEV-HA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEE-EE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEE-Ee-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC
Confidence 999999988877665 67777765543 33333333333333 34 5666 544443 57899999877652
Q ss_pred -EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC-chheeecccCC-ccceEEEEEcCCCceEEEeee--cC
Q 021459 227 -LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ-QKTMIQKLDGH-TDSVISVTCHPTENKIASAGL--DG 301 (312)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~l~~~p~~~~l~~~~~--dg 301 (312)
...+..+... ......+. ++.++++...||..++|.+. .+.....+..+ ...+..++++|++..++.... ..
T Consensus 310 ~~~l~~~~~~~-~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 386 (695)
T 2bkl_A 310 WKEIVPEDSSA-SLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTT 386 (695)
T ss_dssp CEEEECCCSSC-EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTE
T ss_pred CeEEecCCCCC-eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 3333322121 11122232 67788999999998888654 34444555544 567788889999877664432 22
Q ss_pred CeeEEEEee
Q 021459 302 DRTVRVWVQ 310 (312)
Q Consensus 302 d~~v~iw~~ 310 (312)
..+|++|++
T Consensus 387 P~~v~~~d~ 395 (695)
T 2bkl_A 387 PRQIYKTSV 395 (695)
T ss_dssp EEEEEEEET
T ss_pred CCEEEEEEC
Confidence 357888875
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=1e-15 Score=127.47 Aligned_cols=234 Identities=15% Similarity=0.158 Sum_probs=150.5
Q ss_pred cceEEEEECCCCCEEEEEeCC---C--eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC------------
Q 021459 23 RAVSCVKFSNDGTLLASASLD---K--TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD------------ 85 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d---~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------ 85 (312)
..+..++|||||+.|+.++.+ + .|.+|+..+++...... +.. +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457889999999999887653 3 47777888776544333 334 9999999999988887632
Q ss_pred ---------------CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCC-------cEEEEEcCCCeEEE
Q 021459 86 ---------------RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE-------SIRIWEVKTGKCTR 143 (312)
Q Consensus 86 ---------------~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-------~i~~wd~~~~~~~~ 143 (312)
..|.+||+.++. .+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~-~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~- 211 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEE-VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE- 211 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTE-EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-
T ss_pred cceeecCcccccCccceEEEEECCCCe-EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-
Confidence 568899987753 2233333 3 67789999999 777776542 3445544455543
Q ss_pred EeeecCcCeEEEEEccCCCEEEEeeCC--------CeEEEEeCCCCceeeEcccCCCCcEEE-EEECCCCCEEEEEecCC
Q 021459 144 VIRAHSMPVTSVHFNRDGSLIVSGSHD--------GTCKIWDAGEGACLKTLIDDKDPAVSF-AKFSPNGKFILVGTLDS 214 (312)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~d~ 214 (312)
.+..+ ..+..+ +|+|+.++.++.+ ..|.+|| +++ ...+.......+.. +.|+ ++ ++++++.++
T Consensus 212 ~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 212 KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 33334 445444 8999988877644 3688888 443 33444444455664 7899 88 888899999
Q ss_pred eEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeE-EEEECCchheeecccCCcc
Q 021459 215 TLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCV-YVWDLQQKTMIQKLDGHTD 280 (312)
Q Consensus 215 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~h~~ 280 (312)
.+++| +.+++..... .+... +......+ .++++++.++.. .+|.+. ++ ...+..|..
T Consensus 284 ~~~l~-~~~g~~~~~~-~~~~~---v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIA-KGRHW---IMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp EEEEE-EESSSEEEEE-CSSSE---EEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred cEEEE-EcCCceEEEe-cCCCe---EEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 99999 8766554433 33322 22222223 677777777654 677665 32 344555544
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=7.8e-16 Score=123.60 Aligned_cols=242 Identities=9% Similarity=-0.013 Sum_probs=163.3
Q ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 24 AVSCVKFSNDGTLLA-SASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
...+++++|+|++.+ +...++.|.+|+..+.........+...+.+++++++++++++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--ee
Confidence 678899999999777 546788999998765543222222335678899999998666655 88999999865422 22
Q ss_pred ee-cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCC
Q 021459 103 LR-GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEG 181 (312)
Q Consensus 103 ~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (312)
.. ........++++++++.+++...++.|.+|+..+.............+..++++++++++++...++.|.+||....
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 21 22246788999999998777777889999986655433222222235678999999998877777889999998765
Q ss_pred ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeE
Q 021459 182 ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCV 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 261 (312)
........ .......++++++|.++++...++.|.+||............+...... ....++++++++...++.|
T Consensus 182 ~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~---i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 182 NQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLA---VAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp CEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEE---EEECTTCCEEEEEGGGTEE
T ss_pred ceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCcee---EEECCCCCEEEEECCCCEE
Confidence 54332222 2244667889999977777777889999998655432211111122222 2334678888999999999
Q ss_pred EEEECCchhee
Q 021459 262 YVWDLQQKTMI 272 (312)
Q Consensus 262 ~iwd~~~~~~~ 272 (312)
.++++...+..
T Consensus 258 ~~~~~~~~~~~ 268 (270)
T 1rwi_B 258 VKLTSLEHHHH 268 (270)
T ss_dssp EEECCCGGGSC
T ss_pred EEEcCCCcccc
Confidence 99998766543
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=1.5e-15 Score=122.35 Aligned_cols=216 Identities=12% Similarity=0.104 Sum_probs=161.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEeeecc-CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecc-cccE
Q 021459 33 DGTLLASASLDKTVIIWSASSLALVHRFVGHS-EGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGH-SDFV 110 (312)
Q Consensus 33 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~-~~~v 110 (312)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++++ +.++.|..||. ++ +.+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG-RELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-CEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-CEEEEEcCCCCccc
Confidence 46889999999999999999999998888765 4788999999999888 35778999998 54 445555543 3467
Q ss_pred EEEEEecCCCEEEEeec-CCcEEEEEcCCCeEEEEeee------cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce
Q 021459 111 FCVNFNPQSNLIVSGSF-DESIRIWEVKTGKCTRVIRA------HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC 183 (312)
Q Consensus 111 ~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (312)
.++.+.++++.+++.+. ++.|..+|. +++.+..+.. +......+...++|+++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88899999999998877 777877775 5666655532 11234556788999999999999999999987 887
Q ss_pred eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCC---ceeEEEEEEEccCCcEEEEee
Q 021459 184 LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTN---KKYCITSTFSVTNGKYIVSGS 256 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~ 256 (312)
+.++.... . ...+...++|+.++++..++.|..+|..+++.+..+..... ...........+++.++++..
T Consensus 158 ~w~~~~~~-~-~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSG-T-PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSS-C-CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCC-C-ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 77664432 2 23355789999999888888999999998999888764321 112233344456777777653
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=1.2e-14 Score=120.25 Aligned_cols=238 Identities=8% Similarity=0.083 Sum_probs=160.2
Q ss_pred eeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC----CeEEE
Q 021459 15 FKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD----RTLRI 90 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~~ 90 (312)
+..+..+...+.+++|+|++++++++..++.|.+|+..+++.......+...+.+++++++++++++...+ +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 34455667778999999999988888889999999998877654443566789999999999988877666 68999
Q ss_pred EeCCCCceeeeeee--cccccEEEEEEecCCCEEEEeec------CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC
Q 021459 91 WDARTPFDCLKTLR--GHSDFVFCVNFNPQSNLIVSGSF------DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS 162 (312)
Q Consensus 91 wd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
||..+.... ..+. .+...+..+.++|+++++++... .+.|..+|..+++..... .....+..++|+|+++
T Consensus 117 ~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQ-DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCE-EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSS
T ss_pred EeCCCCEEE-EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCC
Confidence 998764321 1111 23456889999999988776653 345666676655543322 2333578899999998
Q ss_pred EE-EEeeCCCeEEEEeCCC-CceeeE----cc-c-CCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccC
Q 021459 163 LI-VSGSHDGTCKIWDAGE-GACLKT----LI-D-DKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHT 234 (312)
Q Consensus 163 ~l-~~~~~d~~i~iwd~~~-~~~~~~----~~-~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 234 (312)
.+ ++.+.++.|.+||..+ +..... .. . ........++++++|+++++...++.|.+||. +++.+..+..+.
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~ 273 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPG 273 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCC
Confidence 55 4555678999999863 332211 11 0 11134566889999998887777899999998 566666665432
Q ss_pred C------ceeEEEEEEEccCCcEEEEeecC
Q 021459 235 N------KKYCITSTFSVTNGKYIVSGSED 258 (312)
Q Consensus 235 ~------~~~~~~~~~~~~~~~~l~~~~~d 258 (312)
. ....+ .+. ++++.|+.++.+
T Consensus 274 ~~~g~~~~~~~~--~~~-~dg~~L~v~~~~ 300 (333)
T 2dg1_A 274 RDEGHMLRSTHP--QFI-PGTNQLIICSND 300 (333)
T ss_dssp GGGTCSCBCCEE--EEC-TTSCEEEEEEEC
T ss_pred CccccccCcceE--EEC-CCCCEEEEEeCc
Confidence 1 12222 333 566566554444
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=1.9e-17 Score=140.32 Aligned_cols=255 Identities=11% Similarity=0.024 Sum_probs=159.8
Q ss_pred EeCCCcceEEEeeeccCC-----EEEEEEccCCCeEEEEcCC---CeEEEEeCCCCceeeeeeecccccEEEEEEecCCC
Q 021459 49 WSASSLALVHRFVGHSEG-----ISDLAWSSDSHYICSASDD---RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSN 120 (312)
Q Consensus 49 w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (312)
.|..+++.+..+..+... +..++|+|+|++|+..... ..|.+||+.++. ......++......+.|+||++
T Consensus 15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSS
T ss_pred ecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCC
Confidence 356666655555444332 6778999999998776543 468888987653 2222222222223377999999
Q ss_pred EEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEE-------------------EEEccCCCEEEEe-----eCCCeEEEE
Q 021459 121 LIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTS-------------------VHFNRDGSLIVSG-----SHDGTCKIW 176 (312)
Q Consensus 121 ~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~iw 176 (312)
.|+..+.++.|++||+.+++.......+...... ..|+|+++.++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999988765555433332222 2456777766544 356689999
Q ss_pred eCCCCceeeEcccCCCCcEEEEEECC-CCCEEEEEecC------CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCC
Q 021459 177 DAGEGACLKTLIDDKDPAVSFAKFSP-NGKFILVGTLD------STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNG 249 (312)
Q Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
|+.+++..... .....+....|+| +++.|+..+.+ ..|.+||+..++...... +.. ...+....+.+++
T Consensus 174 d~~~g~~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~~~spdg 249 (396)
T 3c5m_A 174 DIETGELEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHEFWIPDG 249 (396)
T ss_dssp ETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEEEECTTS
T ss_pred ECCCCcEEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC-CccccceEECCCC
Confidence 99887654332 2234567778999 78877766543 368888886655333222 211 1223333445788
Q ss_pred cEEEEeecC-----CeEEEEECCchheeecccCCccceEEEEEcC-CCceEEEeee--------------cCCeeEEEEe
Q 021459 250 KYIVSGSED-----NCVYVWDLQQKTMIQKLDGHTDSVISVTCHP-TENKIASAGL--------------DGDRTVRVWV 309 (312)
Q Consensus 250 ~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p-~~~~l~~~~~--------------dgd~~v~iw~ 309 (312)
+.|+.++.+ +.|.+||+.+++...... .. ... +.|+| +++.+++++. +++..|++|+
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 250 SAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred CEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 877666543 559999998765432211 11 122 88999 9998887552 2457888887
Q ss_pred ec
Q 021459 310 QD 311 (312)
Q Consensus 310 ~~ 311 (312)
.+
T Consensus 327 ~~ 328 (396)
T 3c5m_A 327 TK 328 (396)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=6.6e-14 Score=113.85 Aligned_cols=279 Identities=8% Similarity=-0.020 Sum_probs=186.2
Q ss_pred ccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEE-EeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce
Q 021459 20 AHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVH-RFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD 98 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 98 (312)
.......++.++++|++.++...++.|.+|+.. ++... .+......+..+++.+++++.++...++.|..+|.. +..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345678999999999988887778999999987 54432 122233678899999999888877768889999977 322
Q ss_pred eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEe
Q 021459 99 CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWD 177 (312)
Q Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (312)
...........+..+++.++++++++...++.|..+|.. ++.... +......+..+++.++++++++...++.|..+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 222222233567889999999888877767889999987 554322 222345678999999999777776678999999
Q ss_pred CCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeec
Q 021459 178 AGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE 257 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (312)
. +++...............+.++++|.+.++....+.|.+||. +++.... .......... .....+++.+.++...
T Consensus 174 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~-~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIPTPNARPH-AITAGKNSEIWFTEWG 249 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEE-EEEECSTTCEEEEETT
T ss_pred C-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECCCCCCCce-EEEECCCCCEEEeccC
Confidence 8 554433222222344667789999987777666778999998 5554332 2111111122 2233456777777767
Q ss_pred CCeEEEEECCchhee-ecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 258 DNCVYVWDLQQKTMI-QKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 258 dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
++.|..||.. ++.. ..+......+.++++.+++..+++.. + .|..+++
T Consensus 250 ~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~--~--~i~~~~p 298 (300)
T 2qc5_A 250 ANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK--C--KIGKLNL 298 (300)
T ss_dssp TTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS--S--EEEEEEE
T ss_pred CCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc--C--ceEEeCC
Confidence 8999999984 3322 22333445688999999987665433 2 4555554
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.76 E-value=1.4e-16 Score=145.01 Aligned_cols=244 Identities=12% Similarity=0.062 Sum_probs=158.2
Q ss_pred ccccceEEEEECCCCCEEE-----EEeCCCeEEEEeCCCcceEEEeeeccCCE--EEEEEccCCCeEEEEcCCCe-----
Q 021459 20 AHSRAVSCVKFSNDGTLLA-----SASLDKTVIIWSASSLALVHRFVGHSEGI--SDLAWSSDSHYICSASDDRT----- 87 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~-----t~~~d~~i~vw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~----- 87 (312)
+|...+..++|||||++|| .|+.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4566789999999999998 34445789999999887641 1122222 67999999999999888765
Q ss_pred --------EEEEeCCCCce---eeeeeecccccEEEEEEecCCCEEEEeecCC----cEEEEEcCCCeEEEEeeecCcCe
Q 021459 88 --------LRIWDARTPFD---CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE----SIRIWEVKTGKCTRVIRAHSMPV 152 (312)
Q Consensus 88 --------v~~wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~~~~~v 152 (312)
|++|++.++.. .+.....+...+..+.|+||+++++..+.++ .|.++|..+++. ..+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce
Confidence 99999987542 3333334556788999999999888777665 677777655543 3444455455
Q ss_pred EEEEEccCCCEEEEee---CCCeEEEEeCCCCce--eeEcccCC-CCcEEEEEECCCCCEEEEEecCCeEEEEEcC-CCc
Q 021459 153 TSVHFNRDGSLIVSGS---HDGTCKIWDAGEGAC--LKTLIDDK-DPAVSFAKFSPNGKFILVGTLDSTLKLWNYS-AGK 225 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~ 225 (312)
....+ ++|.+++... .++.|.+||+.++.. ...+.... ...+..+.++ ++.++++...|+..++|.+. +++
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 55556 5666444433 257899999876542 23333332 3445666676 66778888889988887654 354
Q ss_pred EEEEEEccCCceeEEEEEEEccCCcEEE----EeecCCeEEEEECCchh
Q 021459 226 FLKIYTGHTNKKYCITSTFSVTNGKYIV----SGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~dg~i~iwd~~~~~ 270 (312)
....+..+... .+......++++.++ +....+.|++||+.+++
T Consensus 353 ~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 353 PVRTVQLPGVG--AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEECCCSSSS--EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eeEEecCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 44444332111 121112224565555 33345789999997654
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=2.8e-15 Score=120.71 Aligned_cols=214 Identities=12% Similarity=0.114 Sum_probs=160.2
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc-ccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec-CcCe
Q 021459 75 DSHYICSASDDRTLRIWDARTPFDCLKTLRGHS-DFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH-SMPV 152 (312)
Q Consensus 75 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~-~~~v 152 (312)
.+++|++++.++.|.+||.+++. .+..+..+. ..+.++.+.|++++++ +.++.|..||. +++.+..+..+ ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE-IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE-EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe-EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 46789999999999999997764 455555444 3577889999999888 34678999998 78888877764 3468
Q ss_pred EEEEEccCCCEEEEeeC-CCeEEEEeCCCCceeeEcccCCC-----CcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE
Q 021459 153 TSVHFNRDGSLIVSGSH-DGTCKIWDAGEGACLKTLIDDKD-----PAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF 226 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 226 (312)
.++.+.++|+++++.+. ++.+..+|. +++.+.++..... .....+...++|+++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88999999999999887 778888886 5665554431111 112234578999999999999999999987 888
Q ss_pred EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCc------cceEEEEEcCCCceEEEee
Q 021459 227 LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHT------DSVISVTCHPTENKIASAG 298 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~~p~~~~l~~~~ 298 (312)
+..+..... .+.. ...+++.+++++..+++|..+|..+++.+-++..+. ..+..++..++++.+++..
T Consensus 158 ~w~~~~~~~-~~~~---~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGT-PFSS---AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSC-CCEE---EECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCC-ccce---eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 887765432 2222 234678999999999999999999888876664322 2378888899998888763
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=8.4e-14 Score=122.73 Aligned_cols=281 Identities=13% Similarity=0.084 Sum_probs=189.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCC--CcceEEEeeeccCCEEEEEEc----cCCCeEEEEcC-CCeEEEEeCCC
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSAS--SLALVHRFVGHSEGISDLAWS----SDSHYICSASD-DRTLRIWDART 95 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~v~~wd~~~ 95 (312)
..+..+.|+|||+++++++.|+.|.+||+. +.+.+.++... .....++|+ |||+++++++. ++.+.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 356789999999999999999999999996 77777777643 346789999 69998887765 58999999877
Q ss_pred Cceeeeeeec----------ccc-cEEEEEEecCCCE-EEEeecCCcEEEEEcCCCeEEEEee-ecCcCeEEEEEccCCC
Q 021459 96 PFDCLKTLRG----------HSD-FVFCVNFNPQSNL-IVSGSFDESIRIWEVKTGKCTRVIR-AHSMPVTSVHFNRDGS 162 (312)
Q Consensus 96 ~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 162 (312)
. +.++.+.- |.. .+..+..++++.. +++....|.|.++|....+...... ........+.|+|+++
T Consensus 276 ~-~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 L-EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp C-CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred C-cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 4 44444321 222 5667777887654 4455566899999987654333221 2233466889999999
Q ss_pred EEEEee-CCCeEEEEeCCCCceeeEccc-CCCC----cEEEEEECCCCCEE-EEEe-cCCeEEEEEcCC-------CcEE
Q 021459 163 LIVSGS-HDGTCKIWDAGEGACLKTLID-DKDP----AVSFAKFSPNGKFI-LVGT-LDSTLKLWNYSA-------GKFL 227 (312)
Q Consensus 163 ~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~l-~~~~-~d~~i~v~d~~~-------~~~~ 227 (312)
+++++. .++.|.++|+.+++....+.. ...+ ... .++|++..+ +++. .++.|.++|... .+.+
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 887655 578999999999887665533 2211 222 257875544 4443 468999999877 4566
Q ss_pred EEEEccCCceeEEEEEEEccCCcEEEEeec-------CCeEEEEECCch-----hee-ecc--------cCCccceEEEE
Q 021459 228 KIYTGHTNKKYCITSTFSVTNGKYIVSGSE-------DNCVYVWDLQQK-----TMI-QKL--------DGHTDSVISVT 286 (312)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~-----~~~-~~~--------~~h~~~v~~l~ 286 (312)
+.+.........+ ...++++++.+... .+.|.++|+.+. ... ..+ ......+..+.
T Consensus 433 ~~i~~~g~g~~~i---~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 433 DSFPALGGGSLFI---KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp EEEECSCSCCCCE---ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEEecCCCCCEEE---EeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 6666543322222 23478888776552 469999999766 111 122 11245689999
Q ss_pred EcCCCceEEEeeec---CCeeEEEEee
Q 021459 287 CHPTENKIASAGLD---GDRTVRVWVQ 310 (312)
Q Consensus 287 ~~p~~~~l~~~~~d---gd~~v~iw~~ 310 (312)
|+|+|..+..+-.. .+..|.++|.
T Consensus 510 ~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 510 FNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred ECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 99999887766442 2467777664
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=6.1e-15 Score=121.97 Aligned_cols=253 Identities=11% Similarity=0.002 Sum_probs=171.1
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
.....+.+. ++++.++...++.|.+||..+++.+..+. .......++++++++..++...++.|.+||..+. +....
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~-~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY-EITGY 120 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT-EEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC-eEEEE
Confidence 345667774 34555566667999999999999888775 3467889999999854444447899999999875 33333
Q ss_pred eeccc-----ccEEEEEEecCCCEEEEee--cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCC-----
Q 021459 103 LRGHS-----DFVFCVNFNPQSNLIVSGS--FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHD----- 170 (312)
Q Consensus 103 ~~~~~-----~~v~~~~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 170 (312)
+.... .....+++ . +..++.+. .++.|.++|+.+++....+.... ....+.++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCc
Confidence 33221 13345555 3 44555554 47899999999998877765433 34678899999988777655
Q ss_pred -----CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEE--EEccCCceeEEEEE
Q 021459 171 -----GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKI--YTGHTNKKYCITST 243 (312)
Q Consensus 171 -----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~ 243 (312)
+.|.++|..+++....+..........++++|+++.|.++.. .|.+||..+++.... +....... ....
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p--~gi~ 273 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKY--YGLT 273 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCE--EEEE
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCce--EEEE
Confidence 789999999888766553322234567889999998888754 899999987764311 11111222 2233
Q ss_pred EEccCCcEEEEe----ecCCeEEEEECCchheeecccCCccceEEEEE
Q 021459 244 FSVTNGKYIVSG----SEDNCVYVWDLQQKTMIQKLDGHTDSVISVTC 287 (312)
Q Consensus 244 ~~~~~~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 287 (312)
..+.++.+.++. ..++.|.+||.. ++.+..+.. ...-..++|
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 443467777777 778999999997 777766653 223355555
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.73 E-value=1.4e-13 Score=115.59 Aligned_cols=271 Identities=9% Similarity=0.007 Sum_probs=172.2
Q ss_pred EECCCCCEEEEEeC--CC---eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc----------CCCeEEEEeC
Q 021459 29 KFSNDGTLLASASL--DK---TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS----------DDRTLRIWDA 93 (312)
Q Consensus 29 ~~s~~~~~l~t~~~--d~---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~wd~ 93 (312)
...|++++++.... .. .|.++|..+++.+..+..-..+ .++++||+++++++. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34578887777653 22 8899999999888777644333 899999999998885 3678999998
Q ss_pred CCCceeeeeeecc-------cccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCC-C
Q 021459 94 RTPFDCLKTLRGH-------SDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDG-S 162 (312)
Q Consensus 94 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~ 162 (312)
.+. +.+..+.-. ...-..+.++||+++|+.++. ++.|.++| .+++.... +.... ++.+.|++ +
T Consensus 105 ~t~-~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~ 178 (373)
T 2mad_H 105 VTF-LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPS 178 (373)
T ss_pred CCC-cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCc
Confidence 764 333333211 112346889999999998874 47899999 99887666 54322 23445554 4
Q ss_pred EEEEeeCCCeEEEEeCCCCceeeEcc-----cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCc--EEEEEEccCC
Q 021459 163 LIVSGSHDGTCKIWDAGEGACLKTLI-----DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGK--FLKIYTGHTN 235 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~ 235 (312)
.+++.+.||.+.++|. +++...... ....+......+.+++..++..+.++.+.+.|...+. .+..+.....
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 5667778999999999 766552211 1111212223455565555555578899999986543 2222211100
Q ss_pred -------ceeEEEEEEEccCCcEEEEeec----------CCeEEEEECCchheeecccCCccceEEEEEcCCCc-eEEEe
Q 021459 236 -------KKYCITSTFSVTNGKYIVSGSE----------DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN-KIASA 297 (312)
Q Consensus 236 -------~~~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~~~ 297 (312)
...........++++.+..+.. ++.|.++|+.+.+.+..+.. ......++|+|+++ .++++
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence 0000111122355665555432 46899999999988888753 33578999999999 45554
Q ss_pred eecCCeeEEEEee
Q 021459 298 GLDGDRTVRVWVQ 310 (312)
Q Consensus 298 ~~dgd~~v~iw~~ 310 (312)
. .++++|.++|.
T Consensus 337 ~-~~~~~V~ViD~ 348 (373)
T 2mad_H 337 S-AGTEVLHIYDA 348 (373)
T ss_pred c-CCCCeEEEEEC
Confidence 3 34578999886
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=2.4e-14 Score=118.39 Aligned_cols=259 Identities=10% Similarity=0.017 Sum_probs=171.2
Q ss_pred CCCeEEEEeCCCcceEEEee------eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEE
Q 021459 42 LDKTVIIWSASSLALVHRFV------GHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNF 115 (312)
Q Consensus 42 ~d~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~ 115 (312)
.++.|.++|..+++....+. ........+.+. .++..++...++.|.+||..+. +.+..+.. ......+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~-~~~~~i~~-~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF-KEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC-CEEEEEEC-CSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc-EEEEEcCC-CCCCcEEEE
Confidence 47899999999887765431 112345677774 3555556666899999999875 44455542 355678899
Q ss_pred ecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecC-----cCeEEEEEccCCCEEEEee-CCCeEEEEeCCCCceeeEccc
Q 021459 116 NPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHS-----MPVTSVHFNRDGSLIVSGS-HDGTCKIWDAGEGACLKTLID 189 (312)
Q Consensus 116 ~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~ 189 (312)
+++++.+++...++.|.+||+.+++....+.... .....+++ .+++++++.. .++.|.++|+.+++....+..
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 8888544444478999999999998776665433 13456666 4555555544 488999999999887766543
Q ss_pred CCCCcEEEEEECCCCCEEEEEecC----------CeEEEEEcCCCcEEEEEEccCC-ceeEEEEEEEccCCcEEEEeecC
Q 021459 190 DKDPAVSFAKFSPNGKFILVGTLD----------STLKLWNYSAGKFLKIYTGHTN-KKYCITSTFSVTNGKYIVSGSED 258 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d 258 (312)
.. ....+.++|+|++++++..+ +.|.++|..+++....+..... ....+ .+ .++++.|.++..
T Consensus 171 g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~l--a~-~~d~~~lyv~~~- 244 (328)
T 3dsm_A 171 GI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEV--QL-NGTRDTLYWINN- 244 (328)
T ss_dssp SS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEE--EE-CTTSCEEEEESS-
T ss_pred CC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeE--EE-ecCCCEEEEEcc-
Confidence 22 23446689999877776554 7899999988887766653221 22222 33 356777766554
Q ss_pred CeEEEEECCchheeec--ccCCccceEEEEEcCCCceEEEeee---cCCeeEEEEeec
Q 021459 259 NCVYVWDLQQKTMIQK--LDGHTDSVISVTCHPTENKIASAGL---DGDRTVRVWVQD 311 (312)
Q Consensus 259 g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~p~~~~l~~~~~---dgd~~v~iw~~~ 311 (312)
.|.+||..+++.... +.........++++|++..|..+.. -+.++|.+|+.+
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 899999987765321 2222456889999995554444430 134688888764
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=9.6e-15 Score=117.17 Aligned_cols=238 Identities=8% Similarity=-0.043 Sum_probs=156.3
Q ss_pred CEEEEEEccCCCeEE-EEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE
Q 021459 66 GISDLAWSSDSHYIC-SASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV 144 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 144 (312)
...++++++++++++ +...++.|.+||..+...... ...+.....+++++++++++++.. ++.|.+||...+.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 667899999998776 446788999998765322111 112234567889999998666655 88999999876543322
Q ss_pred eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC
Q 021459 145 IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG 224 (312)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 224 (312)
.......+..++++++|+++++...++.|.+|+..+......... .......++++++|+++++...++.|.+||....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 112224678999999999888877888999998765443221111 1123455678999997777777889999998766
Q ss_pred cEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCee
Q 021459 225 KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRT 304 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~ 304 (312)
............... ....+++.++++...++.|.+||............+...+.+++++|+++.+++.+ ++++
T Consensus 182 ~~~~~~~~~~~~p~~---i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~--~~~~ 256 (270)
T 1rwi_B 182 NQVVLPFTDITAPWG---IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR--GNDR 256 (270)
T ss_dssp CEEECCCSSCCSEEE---EEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG--GGTE
T ss_pred ceEeecccCCCCceE---EEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC--CCCE
Confidence 543322222122222 23345677888877889999999866543332223335689999999998777666 4468
Q ss_pred EEEEeec
Q 021459 305 VRVWVQD 311 (312)
Q Consensus 305 v~iw~~~ 311 (312)
|++++.+
T Consensus 257 v~~~~~~ 263 (270)
T 1rwi_B 257 VVKLTSL 263 (270)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 8888764
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=6.4e-13 Score=107.91 Aligned_cols=239 Identities=7% Similarity=0.002 Sum_probs=160.3
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee--eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV--GHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD 98 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~ 98 (312)
+...+.++++++++.+.++...++.|..|+.. ++. ..+. .....+..+++.+++.++++...++.|..||. ++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 45678999999999988887778899999876 332 2222 23457889999999988887777889999998 3322
Q ss_pred eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE-eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEe
Q 021459 99 CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV-IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWD 177 (312)
Q Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (312)
...........+..++++++++.+++...++.|..||. +++.... .......+..++++++++++++...++.|..||
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 22222233456788999999988877767788999998 6654432 222344578999999999877776788999999
Q ss_pred CCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeec
Q 021459 178 AGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE 257 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (312)
. ++.............+..+.++++|..+++...++.|..||. +++ +..+............. . +++.+.++..
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~-~-~~g~l~v~~~- 284 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGIC-F-DGETIWFAME- 284 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEE-E-CSSCEEEEET-
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEE-e-cCCCEEEEec-
Confidence 8 655433212223345677889999987666657889999998 454 33332221111122222 2 5677666654
Q ss_pred CCeEEEEECCch
Q 021459 258 DNCVYVWDLQQK 269 (312)
Q Consensus 258 dg~i~iwd~~~~ 269 (312)
.+.|..++..+.
T Consensus 285 ~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 CDKIGKLTLIKD 296 (299)
T ss_dssp TTEEEEEEEC--
T ss_pred CCcEEEEEcCcc
Confidence 566777776543
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.4e-14 Score=132.80 Aligned_cols=244 Identities=13% Similarity=0.063 Sum_probs=154.5
Q ss_pred cccceEEEEECCCCCEEEEEeCC-----CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCe--------
Q 021459 21 HSRAVSCVKFSNDGTLLASASLD-----KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRT-------- 87 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------- 87 (312)
|...+..++|||||++||.+..+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999876543 46999999998875431 12122357899999 88888776553
Q ss_pred ------EEEEeCCCCce---eeeeeecccccEEEEEEecCCCEEEEeecCC-----cEEEEEcCCC--eEEEEeeecCcC
Q 021459 88 ------LRIWDARTPFD---CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE-----SIRIWEVKTG--KCTRVIRAHSMP 151 (312)
Q Consensus 88 ------v~~wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~--~~~~~~~~~~~~ 151 (312)
|++|++.++.. .+.....+...+..+.|+|||++++..+.++ .|++||+.++ +....+..+...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 88999876542 2222223334588999999999888776543 7999999877 313444444444
Q ss_pred eEEEEEccCCCEEEEeeCC----CeEEEEeCCCC-ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcC-CCc
Q 021459 152 VTSVHFNRDGSLIVSGSHD----GTCKIWDAGEG-ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYS-AGK 225 (312)
Q Consensus 152 v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~-~~~ 225 (312)
.... ++|+|+.|+..+.+ +.|.+||+.++ .....+.......+..+.+. ++.++++...++..++|.+. ++.
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 4444 34888888877653 45999998774 23334444444445555565 55677777888887777554 355
Q ss_pred EEEEEEccCCceeEEEEEEEccCCcEEE-E---eecCCeEEEEECCchh
Q 021459 226 FLKIYTGHTNKKYCITSTFSVTNGKYIV-S---GSEDNCVYVWDLQQKT 270 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~---~~~dg~i~iwd~~~~~ 270 (312)
..+.+..+... .+......++++.++ + ....+.|++||+.+++
T Consensus 397 ~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 397 PAGAVSLPGIG--SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEECBCSSSC--EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ceeeccCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 44444322111 122222234555444 3 3345889999997654
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.7e-14 Score=132.21 Aligned_cols=271 Identities=13% Similarity=0.087 Sum_probs=167.8
Q ss_pred CCCCCEEEEEeCCCe---EEEE--eCC---CcceEEE------eeeccCCEEEEEEccCCCeEEEEcCC-----CeEEEE
Q 021459 31 SNDGTLLASASLDKT---VIIW--SAS---SLALVHR------FVGHSEGISDLAWSSDSHYICSASDD-----RTLRIW 91 (312)
Q Consensus 31 s~~~~~l~t~~~d~~---i~vw--~~~---~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~~w 91 (312)
+|+|++++....++. -.+| +.. .++.... -.+|...+..++|+|||++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389998876654432 3444 443 3332211 12233467889999999999877543 469999
Q ss_pred eCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCc--------------EEEEEcCCCeE--EEEeee--cCcCeE
Q 021459 92 DARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDES--------------IRIWEVKTGKC--TRVIRA--HSMPVT 153 (312)
Q Consensus 92 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--------------i~~wd~~~~~~--~~~~~~--~~~~v~ 153 (312)
|+.++.. +.. ..+...+..++|+|| +.|+.++.++. |++|++.+++. ...+.. +...+.
T Consensus 195 dl~tg~~-~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKP-LAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGH 271 (741)
T ss_dssp ETTTCCE-EEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred ECCCCCC-CCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEE
Confidence 9988643 221 111122346889999 98888776654 88999877652 223332 223478
Q ss_pred EEEEccCCCEEEEeeCCC-----eEEEEeCCCC--ceeeEcccCCCCcEEEEEECCCCCEEEEEec----CCeEEEEEcC
Q 021459 154 SVHFNRDGSLIVSGSHDG-----TCKIWDAGEG--ACLKTLIDDKDPAVSFAKFSPNGKFILVGTL----DSTLKLWNYS 222 (312)
Q Consensus 154 ~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~v~d~~ 222 (312)
.+.|+|||++++..+.++ .|.+||+.++ .....+.......... ++|+|+.|+..+. ++.|.+||+.
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~--~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF--VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE--EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE--EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 899999999888776543 8999998776 3133444333333333 3488888888765 3459999988
Q ss_pred CC--cEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC-chheeecccC-CccceEEEEEcCCCceEEEe-
Q 021459 223 AG--KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ-QKTMIQKLDG-HTDSVISVTCHPTENKIASA- 297 (312)
Q Consensus 223 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~-h~~~v~~l~~~p~~~~l~~~- 297 (312)
++ .....+. +.... .....+ .++.++++...||..+||.+. ++.....+.. +...+..++++|+++.++..
T Consensus 350 ~~~~~~~~l~~-~~~~~-l~~~~~--~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 425 (741)
T 1yr2_A 350 GSTPRFDTVVP-ESKDN-LESVGI--AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSF 425 (741)
T ss_dssp SSSCEEEEEEC-CCSSE-EEEEEE--EBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred CCccccEEEec-CCCCe-EEEEEE--ECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEE
Confidence 74 3333333 32221 111222 256788889999988877553 3444455543 35678899999998866643
Q ss_pred -eecCCeeEEEEee
Q 021459 298 -GLDGDRTVRVWVQ 310 (312)
Q Consensus 298 -~~dgd~~v~iw~~ 310 (312)
+.....+|++|++
T Consensus 426 ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 426 SSFTQPATVLALDP 439 (741)
T ss_dssp EETTEEEEEEEEET
T ss_pred cCCCCCCEEEEEEC
Confidence 3233467888875
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=1.5e-13 Score=114.19 Aligned_cols=271 Identities=12% Similarity=0.148 Sum_probs=175.8
Q ss_pred EEECCCCCEEEEEeC-----CCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc----------CCCeEEEEe
Q 021459 28 VKFSNDGTLLASASL-----DKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS----------DDRTLRIWD 92 (312)
Q Consensus 28 ~~~s~~~~~l~t~~~-----d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~wd 92 (312)
....|+++.++.... ++.|.+.|..+++.+..+..-..+ . ++++|||+++++++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 455789998888765 679999999999999888765555 4 99999999888775 357899999
Q ss_pred CCCCceeeeeeecc-------cccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCE
Q 021459 93 ARTPFDCLKTLRGH-------SDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSL 163 (312)
Q Consensus 93 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 163 (312)
..+. +.+..+.-. ...-..+.++||+++++.+.. ++.|.++|+.+++.+..+..... ...+....+.
T Consensus 116 ~~t~-~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~ 191 (386)
T 3sjl_D 116 PVTL-LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDT 191 (386)
T ss_dssp TTTC-CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTE
T ss_pred CCCC-eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCce
Confidence 9875 444443211 012335789999999888764 68899999999998887754321 1223334456
Q ss_pred EEEeeCCCeEEEEeCCC-CceeeEc---cc-CCCCcEEEEEE-CCCCCEEEEEecCCeEEEEEcCCCc--EEEEEEc---
Q 021459 164 IVSGSHDGTCKIWDAGE-GACLKTL---ID-DKDPAVSFAKF-SPNGKFILVGTLDSTLKLWNYSAGK--FLKIYTG--- 232 (312)
Q Consensus 164 l~~~~~d~~i~iwd~~~-~~~~~~~---~~-~~~~~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~--- 232 (312)
+++.+.||.+.+.++.+ ++..... .. ...+......| .++|+++. .+.+|.|+++|..++. .+..+..
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 77778888888888875 4432211 11 11111111234 46775554 5568999999987654 2222220
Q ss_pred -------cCCceeEEEEEEEccCCcEEEEeec----------CCeEEEEECCchheeecccCCccceEEEEEcCCCc-eE
Q 021459 233 -------HTNKKYCITSTFSVTNGKYIVSGSE----------DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN-KI 294 (312)
Q Consensus 233 -------~~~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l 294 (312)
.......+ ... ++++.+..... .+.|.+.|+.+++.+.++.. ...+..|+++|+++ +|
T Consensus 271 ~~~~~g~~p~g~q~~--a~~-~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 271 AERADGWRPGGWQQV--AYH-RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLL 346 (386)
T ss_dssp HHHHTTEEECSSSCE--EEE-TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEE
T ss_pred ccccccccCCCccee--eEC-CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEE
Confidence 00111112 222 44555444321 35799999999998888763 34678999999997 45
Q ss_pred EEeeecCCeeEEEEee
Q 021459 295 ASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 295 ~~~~~dgd~~v~iw~~ 310 (312)
.++ ..++++|.++|.
T Consensus 347 y~t-n~~~~~VsViD~ 361 (386)
T 3sjl_D 347 YAL-STGDKTLYIHDA 361 (386)
T ss_dssp EEE-ETTTTEEEEEET
T ss_pred EEE-cCCCCeEEEEEC
Confidence 443 335678888875
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=8.6e-13 Score=108.09 Aligned_cols=242 Identities=10% Similarity=0.072 Sum_probs=159.5
Q ss_pred ecccccceEEEEECCCCCEEEE-------EeCCCeEEEEeCCCcceEEEee----eccCCEEEEEEccC-CCeEEEEcCC
Q 021459 18 LTAHSRAVSCVKFSNDGTLLAS-------ASLDKTVIIWSASSLALVHRFV----GHSEGISDLAWSSD-SHYICSASDD 85 (312)
Q Consensus 18 ~~~h~~~v~~~~~s~~~~~l~t-------~~~d~~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~d 85 (312)
+...-....+++|+++++++++ +..++.|.+|+..+++...... ++...+..++++++ ++++++.. .
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~ 91 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R 91 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence 3444456788999999998888 5677899999987776532221 14567899999999 76555544 4
Q ss_pred CeEEEEeCCCCceeeee-ee----cccccEEEEEEecCCCEEEEeecC---------------CcEEEEEcCCCeEEEEe
Q 021459 86 RTLRIWDARTPFDCLKT-LR----GHSDFVFCVNFNPQSNLIVSGSFD---------------ESIRIWEVKTGKCTRVI 145 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~-~~----~~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~~wd~~~~~~~~~~ 145 (312)
..|.+||.. +.. ... .. .....+.+++++++++++++...+ +.|..+|.. ++.....
T Consensus 92 ~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 478899987 322 111 11 112347789999999887776654 567777765 5443322
Q ss_pred eecCcCeEEEEEc----cCCCEEE-EeeCCCeEEEEeCC-CCce-----eeEcccCCC-CcEEEEEECCCCCEEEEEecC
Q 021459 146 RAHSMPVTSVHFN----RDGSLIV-SGSHDGTCKIWDAG-EGAC-----LKTLIDDKD-PAVSFAKFSPNGKFILVGTLD 213 (312)
Q Consensus 146 ~~~~~~v~~~~~~----~~~~~l~-~~~~d~~i~iwd~~-~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d 213 (312)
.+......++++ |+++.+. +...++.|.+||.. ++.. ...+ .... .....++++++|.++++...+
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-PGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-CCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred -cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-CCCCCCCCCceEECCCCCEEEEEcCC
Confidence 233346788999 9996554 44567899999975 3332 1111 1111 345667899999988887788
Q ss_pred CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCc-EEEEeecCCeEEEEECCc
Q 021459 214 STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK-YIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 214 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 268 (312)
+.|.+||..+++.+..+..+......+ .+ .++++ ++++...++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i--~~-~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNL--HF-KPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEE--EE-CTTSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeE--EE-CCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999999987666655555443333222 33 46777 555666778999999864
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.64 E-value=2.2e-14 Score=119.74 Aligned_cols=173 Identities=13% Similarity=0.093 Sum_probs=131.8
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc---------e-EEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLA---------L-VHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
+++.+++++...++++|+.++ +++|+..... . ......+.. |+.++| ++.+|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999985 6669765433 1 112234566 999999 89999998 8899999998
Q ss_pred CCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeE
Q 021459 94 RTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTC 173 (312)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
.+.. .......|...+.++.+.+. .++++..||.|.+||+.+++... +...|++++|+|+| ++.|..||.+
T Consensus 114 ~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 114 EELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred hhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 7643 33344556667877776654 38888999999999999877543 34579999999999 6789999999
Q ss_pred EEEeCCCCce--eeEcc-----c---CCCCcEEEEEECCCCCEEEEE
Q 021459 174 KIWDAGEGAC--LKTLI-----D---DKDPAVSFAKFSPNGKFILVG 210 (312)
Q Consensus 174 ~iwd~~~~~~--~~~~~-----~---~~~~~~~~~~~~~~~~~l~~~ 210 (312)
++|+...... .+++. . .+...+..+.|.+++.++++-
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9998877664 33441 1 135678889999999988873
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.63 E-value=2e-12 Score=109.94 Aligned_cols=237 Identities=12% Similarity=0.110 Sum_probs=155.0
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCC--eEEEEeCCCCceee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDR--TLRIWDARTPFDCL 100 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~~wd~~~~~~~~ 100 (312)
.....++|+|+++++++...++.|++|+..++........ ..... ++|+++++.|+++..++ .|.+++...... .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-P 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-E
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-e
Confidence 4677899999999888877789999999987766544333 33334 99999999998888766 788888765432 1
Q ss_pred eee---ec-ccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE----eeecCcC--eEEEEEcc-CCCEEEEeeC
Q 021459 101 KTL---RG-HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV----IRAHSMP--VTSVHFNR-DGSLIVSGSH 169 (312)
Q Consensus 101 ~~~---~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~----~~~~~~~--v~~~~~~~-~~~~l~~~~~ 169 (312)
..+ .. ......+++++|++..|+.+..++.|+.||..++..... ....... ...++|+| ++.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 122 11 334567889999555566577788999999987754322 1111111 23899999 4666677777
Q ss_pred CCeEEEEeCCCCceeeEcccCC--------------CCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCcEEEEEEccC
Q 021459 170 DGTCKIWDAGEGACLKTLIDDK--------------DPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGKFLKIYTGHT 234 (312)
Q Consensus 170 d~~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~ 234 (312)
++.|..|+.... ...+.... -.....++++++|+++++-. .++.|+.||..++... .+.++.
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCC
Confidence 889999987643 22222211 12356678999999777777 7899999998777643 333321
Q ss_pred C-------------ceeEEEEEEEccCCcEEEEeecCCeEEEEEC
Q 021459 235 N-------------KKYCITSTFSVTNGKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 235 ~-------------~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 266 (312)
. ........+ .+++.++++-..+++|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giav-d~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICY-DGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEE-CSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEE-cCCCCEEEEECCCCeEEEEEe
Confidence 0 011222222 244667777777777776654
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=3.5e-12 Score=104.42 Aligned_cols=241 Identities=9% Similarity=0.100 Sum_probs=154.7
Q ss_pred CCEEEEEEccCCCeEEE-------EcCCCeEEEEeCCCCceeeeee---ecccccEEEEEEecC-CCEEEEeecCCcEEE
Q 021459 65 EGISDLAWSSDSHYICS-------ASDDRTLRIWDARTPFDCLKTL---RGHSDFVFCVNFNPQ-SNLIVSGSFDESIRI 133 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~-------~~~d~~v~~wd~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~ 133 (312)
....+++|++++.++++ ...++.|.+||..++....... .++...+..+.++++ ++++++. ..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 45678999999987777 5678899999976643211111 124456889999999 6555544 4447999
Q ss_pred EEcCCCeEEEE-eee----cCcCeEEEEEccCCCEEEEeeCC---------------CeEEEEeCCCCceeeEcccCCCC
Q 021459 134 WEVKTGKCTRV-IRA----HSMPVTSVHFNRDGSLIVSGSHD---------------GTCKIWDAGEGACLKTLIDDKDP 193 (312)
Q Consensus 134 wd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~ 193 (312)
||.. ++.... ... ....+..++++++|+++++...+ +.|..+|.. ++... +... ..
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~-~~ 172 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTA-FQ 172 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEE-ES
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccC-CC
Confidence 9988 665433 221 12347899999999888776655 567778765 44322 2111 12
Q ss_pred cEEEEEEC----CCCCEEEEE-ecCCeEEEEEcC-CCcEE--EEEEccCCce-eEEEEEEEccCCcEEEEeecCCeEEEE
Q 021459 194 AVSFAKFS----PNGKFILVG-TLDSTLKLWNYS-AGKFL--KIYTGHTNKK-YCITSTFSVTNGKYIVSGSEDNCVYVW 264 (312)
Q Consensus 194 ~~~~~~~~----~~~~~l~~~-~~d~~i~v~d~~-~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iw 264 (312)
....++++ |+++.|.++ ..++.|.+||.. +++.. ..+....... .........+++.++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 34556788 998766555 567899999986 44321 1221111110 111222334678888887788999999
Q ss_pred ECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEeec
Q 021459 265 DLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 265 d~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
|..+++....+..+...+.+++++|+++.|..++. +++.|..|+++
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~-~~~~l~~~~~~ 298 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH-ENNAVWKFEWQ 298 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET-TTTEEEEEECS
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC-CCCeEEEEeCC
Confidence 98866666666666678999999999986655543 33577777653
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=1.2e-11 Score=100.40 Aligned_cols=238 Identities=11% Similarity=0.065 Sum_probs=159.2
Q ss_pred cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEE
Q 021459 64 SEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTR 143 (312)
Q Consensus 64 ~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~ 143 (312)
...+.++++.++|++.++...++.|.+||.. ..............+..++++++++.+++...++.|..+|.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4567899999999988877778999999987 322211222333568889999999888777667889999988 55432
Q ss_pred E-eeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcC
Q 021459 144 V-IRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYS 222 (312)
Q Consensus 144 ~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 222 (312)
. .......+..+++.++++++++...++.|..+|.. ++...............+.++++++.+++...++.|..+|.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 2 22233568899999999988887778899999987 55432222223345677789999997666666789999998
Q ss_pred CCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheee-cccCCccceEEEEEcCCCceEEEeeecC
Q 021459 223 AGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQ-KLDGHTDSVISVTCHPTENKIASAGLDG 301 (312)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~p~~~~l~~~~~dg 301 (312)
+++... +........... ....+++.+.++....+.|..||. +++... .+..+...+.++++.++++.+++.. +
T Consensus 175 ~g~~~~-~~~~~~~~~~~~-i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~--~ 249 (300)
T 2qc5_A 175 TGKLEE-YPLPTNAAAPVG-ITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW--G 249 (300)
T ss_dssp TCCEEE-EECSSTTCCEEE-EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET--T
T ss_pred CCcEEE-eeCCCCCCCcce-EEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc--C
Confidence 555443 322111111222 223356777777777889999998 333222 2333456789999999988666543 3
Q ss_pred CeeEEEEee
Q 021459 302 DRTVRVWVQ 310 (312)
Q Consensus 302 d~~v~iw~~ 310 (312)
.+.|..++.
T Consensus 250 ~~~i~~~~~ 258 (300)
T 2qc5_A 250 ANQIGRITN 258 (300)
T ss_dssp TTEEEEECT
T ss_pred CCeEEEECC
Confidence 456776654
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.60 E-value=6.6e-13 Score=112.30 Aligned_cols=267 Identities=11% Similarity=0.110 Sum_probs=173.3
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc----------CCCeEEEEeCCCC
Q 021459 32 NDGTLLASASLD-----KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS----------DDRTLRIWDARTP 96 (312)
Q Consensus 32 ~~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~wd~~~~ 96 (312)
|+++.++..... +.|.+.|..+.+.+..+..-..+ .++++||+++|+++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 567766665442 69999999999999888765555 899999999888876 3678999999875
Q ss_pred ceeeeeeecc-------cccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCC-CEEEE
Q 021459 97 FDCLKTLRGH-------SDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDG-SLIVS 166 (312)
Q Consensus 97 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 166 (312)
+.+..+.-. ...-..+.++||+++++.+.. ++.|.+.|+.+++.+..+..... ....|++ ..+++
T Consensus 160 -~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 -LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYM 234 (426)
T ss_dssp -CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEE
T ss_pred -cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEE
Confidence 334443210 111235789999999998874 57899999999998877654321 2233432 45566
Q ss_pred eeCCCeEEEEeCCCCceeeE----cccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEE--EEEEcc-------
Q 021459 167 GSHDGTCKIWDAGEGACLKT----LIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFL--KIYTGH------- 233 (312)
Q Consensus 167 ~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~------- 233 (312)
.+.||.+.+.+..+++.... +.....+......+.+++..++..+..+.|.+.|...+... ..+...
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 66777777777754443321 11111121122357888888877788899999998655421 111100
Q ss_pred ---CCceeEEEEEEEccCCcEEEEee----------cCCeEEEEECCchheeecccCCccceEEEEEcCCCc-eEEEeee
Q 021459 234 ---TNKKYCITSTFSVTNGKYIVSGS----------EDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTEN-KIASAGL 299 (312)
Q Consensus 234 ---~~~~~~~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~-~l~~~~~ 299 (312)
......+ .+. ++++.+.+.. .++.|.+.|+.+.+.+.++... .....++|+|+++ .++++..
T Consensus 315 g~~p~g~~~v--a~s-~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 315 DWRPGGWQQT--AYH-RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp TEEECSSSCE--EEE-GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEET
T ss_pred ccccCCceee--EEc-CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcC
Confidence 0000011 233 4455444432 1457999999999988887632 3478999999998 6665553
Q ss_pred cCCeeEEEEee
Q 021459 300 DGDRTVRVWVQ 310 (312)
Q Consensus 300 dgd~~v~iw~~ 310 (312)
++++|.++|.
T Consensus 391 -~s~~VsVID~ 400 (426)
T 3c75_H 391 -GTQTLHIYDA 400 (426)
T ss_dssp -TTTEEEEEET
T ss_pred -CCCeEEEEEC
Confidence 3578888875
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.58 E-value=1.3e-11 Score=105.03 Aligned_cols=236 Identities=8% Similarity=0.064 Sum_probs=152.2
Q ss_pred CEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCC--cEEEEEcCCCeEEE
Q 021459 66 GISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE--SIRIWEVKTGKCTR 143 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~ 143 (312)
....|+|+++++++++...++.|++||..+.. ....... ..... ++|+++++.|+++..++ .|.+++...+....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE-EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE-EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 57789999999977777778899999987642 2222222 22223 88999999988888766 78889987665433
Q ss_pred Ee---ee-cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeE----cccCCCCc-EEEEEECCC-CCEEEEEecC
Q 021459 144 VI---RA-HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKT----LIDDKDPA-VSFAKFSPN-GKFILVGTLD 213 (312)
Q Consensus 144 ~~---~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~-~~~~~~~~~-~~~l~~~~~d 213 (312)
.+ .. ....+.+++++|++..|+.+..++.|..||..++..... ........ ...++++|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 12 334567899999444455567788999999876653221 11111111 126779995 5555555677
Q ss_pred CeEEEEEcCCCcEEEEEEccC---C----------ceeEEEEEEEccCCcEEEEee-cCCeEEEEECCchheeecccCC-
Q 021459 214 STLKLWNYSAGKFLKIYTGHT---N----------KKYCITSTFSVTNGKYIVSGS-EDNCVYVWDLQQKTMIQKLDGH- 278 (312)
Q Consensus 214 ~~i~v~d~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h- 278 (312)
+.|+.|+.... +..+.++. . ....... ...+++.++++-. .+++|+.|++.++.. ..+.++
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gi-a~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGM-TVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEE-EECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEE-EEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 89999987543 33333322 0 0112222 2346788888888 899999999766543 333322
Q ss_pred --------------ccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 279 --------------TDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 279 --------------~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
-.....|+++|++..+++-. +..+|+.+.+
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~--~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA--WGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES--TTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC--CCCeEEEEEe
Confidence 23578999999987776655 4567777655
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=3.4e-11 Score=97.97 Aligned_cols=226 Identities=11% Similarity=0.072 Sum_probs=145.9
Q ss_pred CEEEEEEccCC-CeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEE
Q 021459 66 GISDLAWSSDS-HYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRV 144 (312)
Q Consensus 66 ~v~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 144 (312)
-.....|++++ .++++...++.|..||..+... ... .....+.+++++++++++++ . ++.|.+||..+++....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 34578899964 4566666788999999876532 222 23467889999999995554 3 56799999988875433
Q ss_pred eeec----CcCeEEEEEccCCCEEEEeeC-----------CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEE
Q 021459 145 IRAH----SMPVTSVHFNRDGSLIVSGSH-----------DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILV 209 (312)
Q Consensus 145 ~~~~----~~~v~~~~~~~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 209 (312)
.... ...+..++++|+|+++++... .+.+..++.. ++.. .+.. .......++|+|+++.|.+
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~-~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFD-QVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEE-EESBEEEEEECTTSCEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEee-ccccccceEEcCCCCEEEE
Confidence 3221 234788999999997765432 2344444443 2222 2211 1223456789999987654
Q ss_pred -EecCCeEEEEEc--CCCcEE--EEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEE
Q 021459 210 -GTLDSTLKLWNY--SAGKFL--KIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVIS 284 (312)
Q Consensus 210 -~~~d~~i~v~d~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 284 (312)
.+.++.|.+||+ .++... +.+................+++.+.++...++.|..||..+++.+..+..+...+.+
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTS 245 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEE
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceE
Confidence 456789999997 455432 222211110011122233467888888888899999999888888888777778999
Q ss_pred EEEc-CCCceEEEeee
Q 021459 285 VTCH-PTENKIASAGL 299 (312)
Q Consensus 285 l~~~-p~~~~l~~~~~ 299 (312)
++|. |+++.|..++.
T Consensus 246 ~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEESGGGCEEEEEEB
T ss_pred EEEeCCCCCEEEEEcC
Confidence 9998 88877655554
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.57 E-value=1.1e-12 Score=119.23 Aligned_cols=242 Identities=11% Similarity=0.143 Sum_probs=149.4
Q ss_pred ccccceEEEEECCCCCEEEEE-----eCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCC--------
Q 021459 20 AHSRAVSCVKFSNDGTLLASA-----SLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDR-------- 86 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~-----~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------- 86 (312)
+|...+..++|||||++||-+ +....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 456678899999999988843 333579999999988654311 11112468899 999888887764
Q ss_pred -----eEEEEeCCCCce---eeeeeec-ccccEEEEEEecCCCEEEEeec----CCcEEEEEcCCCe-EEEEeeecCcCe
Q 021459 87 -----TLRIWDARTPFD---CLKTLRG-HSDFVFCVNFNPQSNLIVSGSF----DESIRIWEVKTGK-CTRVIRAHSMPV 152 (312)
Q Consensus 87 -----~v~~wd~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~----dg~i~~wd~~~~~-~~~~~~~~~~~v 152 (312)
.|++|++.++.. .+..... |......+.++||+++++.... ...|+++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 399999876542 2333333 4456788999999998754332 2479999997763 334444454444
Q ss_pred EEEEEccCCCEEEEee-CC---CeEEEEeCCCCce--eeEcccCCCCcEEEEEECCCCCEEEEEecCC---eEEEEEcCC
Q 021459 153 TSVHFNRDGSLIVSGS-HD---GTCKIWDAGEGAC--LKTLIDDKDPAVSFAKFSPNGKFILVGTLDS---TLKLWNYSA 223 (312)
Q Consensus 153 ~~~~~~~~~~~l~~~~-~d---~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~v~d~~~ 223 (312)
... +++++..|+..+ .+ +.|..+|+.++.. ...+..+....+ .++++++.|+....++ .|++||+..
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 444 566666555433 33 5788999887543 233444433333 6889998888776544 688998875
Q ss_pred CcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC----CeEEEEECCchh
Q 021459 224 GKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED----NCVYVWDLQQKT 270 (312)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~ 270 (312)
+. ...+..... .. +......++++.++....+ +.|..||+.+++
T Consensus 360 ~~-~~~l~~p~~-~~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 360 KR-VREVALPGL-GS-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CE-EEEECCSSS-SE-EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred Ce-eEEeecCCC-ce-EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 43 333322111 11 2111122345544443333 889999986653
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=1.3e-10 Score=97.57 Aligned_cols=238 Identities=10% Similarity=-0.026 Sum_probs=156.8
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCcceEEEeeec-------cCCEEEEEEccCCCeEEEEcC--CCe
Q 021459 27 CVKFSNDGTLLASAS----------LDKTVIIWSASSLALVHRFVGH-------SEGISDLAWSSDSHYICSASD--DRT 87 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~----------~d~~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~ 87 (312)
.++++|||++++.+. .++.|.++|..+++.+..+... ......++|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999988877665422 123457999999999998864 478
Q ss_pred EEEEeCCCCceeeee-eecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCCCeEEEEee-----ecCcCe-EEEEEcc
Q 021459 88 LRIWDARTPFDCLKT-LRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKTGKCTRVIR-----AHSMPV-TSVHFNR 159 (312)
Q Consensus 88 v~~wd~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~-----~~~~~v-~~~~~~~ 159 (312)
|.++| .+. +.+.. +... + ++.+.|++ +.+++.+.||.+.++|. +++...... ....++ ....+.+
T Consensus 150 v~viD-~t~-~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 150 VGLVV-QGG-SSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred EEEEE-CCC-CEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 99999 775 44444 3321 1 24445555 45667778999999999 776553221 112222 2234566
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCc--eeeEcccC---------CCCcEEEEEECCCCCEEEEEec----------CCeEEE
Q 021459 160 DGSLIVSGSHDGTCKIWDAGEGA--CLKTLIDD---------KDPAVSFAKFSPNGKFILVGTL----------DSTLKL 218 (312)
Q Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~----------d~~i~v 218 (312)
++..++..+..+.+.+.|+.... ....+... .......+.++|+++.+.++.. ++.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 65554444577899999986542 12221100 0111334668999988877643 358999
Q ss_pred EEcCCCcEEEEEEccCCceeEEEEEEEccCCc-EEEEee-cCCeEEEEECCchheeecc
Q 021459 219 WNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK-YIVSGS-EDNCVYVWDLQQKTMIQKL 275 (312)
Q Consensus 219 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 275 (312)
+|..+++.+..+..... ...+ .+ .++++ +++++. .++.|.++|+.+.+.+..+
T Consensus 303 ID~~t~~vv~~i~~g~~-p~~i--~~-s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 303 VTGLVGQTSSQISLGHD-VDAI--SV-AQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EECCCCEEEEEEECCCC-cCeE--EE-CCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 99999988877754332 2233 23 46777 677776 5899999999998887763
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=1.4e-11 Score=100.59 Aligned_cols=235 Identities=11% Similarity=0.051 Sum_probs=148.7
Q ss_pred eeeecccccceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 15 FKTLTAHSRAVSCVKFSNDGT-LLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 15 ~~~~~~h~~~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
.+.+.....-.....|+|+++ ++++...++.|..|+.. ++ ...+..+...+..++++++|+++++...++.|.+|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 344555556678899999998 66777778999999874 44 3445556677899999999997776666688999987
Q ss_pred CCCceeeee-eecc-cccEEEEEEecCCCEEEE----eec-------------CCcEEEEEcCCCeEEEEeeecCcCeEE
Q 021459 94 RTPFDCLKT-LRGH-SDFVFCVNFNPQSNLIVS----GSF-------------DESIRIWEVKTGKCTRVIRAHSMPVTS 154 (312)
Q Consensus 94 ~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~~wd~~~~~~~~~~~~~~~~v~~ 154 (312)
......+.. ..+. ...+..+.++++++++++ +.. .+.|..+|..+++..... .......
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~g 192 (305)
T 3dr2_A 115 DGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNG 192 (305)
T ss_dssp TSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEE
T ss_pred CCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcc
Confidence 532111111 1111 123567899999998886 332 245777887666654333 3345678
Q ss_pred EEEccCCCEEEEeeCC------CeEEEEeCCCCcee--eEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcE
Q 021459 155 VHFNRDGSLIVSGSHD------GTCKIWDAGEGACL--KTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKF 226 (312)
Q Consensus 155 ~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 226 (312)
++|+|+++.++.+... +.|..|++..+... ..+..........+.++++|++.+ ++.+ .|.+|+. +++.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~ 269 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQL 269 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCE
Confidence 9999999977776654 68999998654311 111111112223466899998544 4444 5999997 5666
Q ss_pred EEEEEccCCceeEEEEEEEccCCcEEEEeecCCe
Q 021459 227 LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNC 260 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 260 (312)
+..+..... .. ...+. ++++.|..++.++.
T Consensus 270 ~~~~~~~~~-~~--~~~f~-~d~~~L~it~~~~l 299 (305)
T 3dr2_A 270 LGHIPTPGT-AS--NCTFD-QAQQRLFITGGPCL 299 (305)
T ss_dssp EEEEECSSC-CC--EEEEC-TTSCEEEEEETTEE
T ss_pred EEEEECCCc-ee--EEEEe-CCCCEEEEEcCCeE
Confidence 666654432 22 22344 66767766666543
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=1.9e-10 Score=93.59 Aligned_cols=225 Identities=12% Similarity=0.117 Sum_probs=142.5
Q ss_pred cccceEEEEECCCC-CEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCcee
Q 021459 21 HSRAVSCVKFSNDG-TLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDC 99 (312)
Q Consensus 21 h~~~v~~~~~s~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~ 99 (312)
+..--.+..|+|++ .++++...++.|..|+..+++.. . ......+.+++++++|+++++. +..|.+||..+....
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~-~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-R-VTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-E-EECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-E-EeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 44455688999965 45666667899999999876552 2 2345779999999999965543 567999998764321
Q ss_pred -eeeeec--ccccEEEEEEecCCCEEEEeecC---------CcEEEEEcCC-CeEEEEeeecCcCeEEEEEccCCCEE-E
Q 021459 100 -LKTLRG--HSDFVFCVNFNPQSNLIVSGSFD---------ESIRIWEVKT-GKCTRVIRAHSMPVTSVHFNRDGSLI-V 165 (312)
Q Consensus 100 -~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d---------g~i~~wd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 165 (312)
+..... ....+..++++|+++++++.... ..-.+|.+.. ++... +.........++|+|+++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEE
Confidence 111111 12357889999999976654321 2234554432 33322 22233346789999999866 4
Q ss_pred EeeCCCeEEEEeC--CCCcee--eEcc--cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 166 SGSHDGTCKIWDA--GEGACL--KTLI--DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 166 ~~~~d~~i~iwd~--~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
+.+.++.|..||+ .++... +.+. .........++++++|++.++....+.|..||..+++.+..+..+.....
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t- 244 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT- 244 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE-
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce-
Confidence 5566789999986 344321 1111 11123456678999998888777788999999988888877765543332
Q ss_pred EEEEEEccCCcEE
Q 021459 240 ITSTFSVTNGKYI 252 (312)
Q Consensus 240 ~~~~~~~~~~~~l 252 (312)
.+.+..++++.|
T Consensus 245 -~~~f~g~d~~~L 256 (297)
T 3g4e_A 245 -SCCFGGKNYSEM 256 (297)
T ss_dssp -EEEEESGGGCEE
T ss_pred -EEEEeCCCCCEE
Confidence 234443444444
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=1.2e-11 Score=102.85 Aligned_cols=254 Identities=12% Similarity=0.067 Sum_probs=161.6
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCcceEEEeeecc-------CCEEEEEEccCCCeEEEEcC--CCe
Q 021459 27 CVKFSNDGTLLASAS----------LDKTVIIWSASSLALVHRFVGHS-------EGISDLAWSSDSHYICSASD--DRT 87 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~----------~d~~i~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~ 87 (312)
.++++|||++++.+. .++.|.+||..+++.+..+.-.. .....++++|||++|+++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 36789999999999888775321 13456999999999888864 689
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC-CeEEEEeeec----CcCeE-EEEEc-cC
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT-GKCTRVIRAH----SMPVT-SVHFN-RD 160 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~----~~~v~-~~~~~-~~ 160 (312)
|.++|+.+. +.+.++.-.. . ...+....+.+++.+.||.+.+.++.+ ++.......+ ..++. ...|. ++
T Consensus 162 VsVID~~t~-~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 162 VGVVDLEGK-AFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp EEEEETTTT-EEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT
T ss_pred EEEEECCCC-cEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC
Confidence 999999885 4555553211 1 122333445677778899988888875 5432211111 12222 23554 67
Q ss_pred CCEEEEeeCCCeEEEEeCCCCc--eeeEcc--c-------CCCCcEEEEEECCCCCEEEEEec----------CCeEEEE
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGA--CLKTLI--D-------DKDPAVSFAKFSPNGKFILVGTL----------DSTLKLW 219 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~--~~~~~~--~-------~~~~~~~~~~~~~~~~~l~~~~~----------d~~i~v~ 219 (312)
|++++ .+.+|.+.+.|+.++. ....+. . ........+.++++++.+.+... .++|.++
T Consensus 238 G~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 238 GRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp TEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 76555 4557999999987654 222211 0 00111123556888888877643 2579999
Q ss_pred EcCCCcEEEEEEccCCceeEEEEEEEccCCc-EEEE-eecCCeEEEEECCchheeecccCCccceEEEEEcCC
Q 021459 220 NYSAGKFLKIYTGHTNKKYCITSTFSVTNGK-YIVS-GSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPT 290 (312)
Q Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~ 290 (312)
|..+++.++.+.... ..+.+ .+ .++++ .|++ ...++.|.++|..+++.+..++.-. .-+.+.+++|
T Consensus 317 D~~t~kv~~~i~vg~-~~~~l--av-s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~-~p~~l~~s~d 384 (386)
T 3sjl_D 317 DAKTGERLAKFEMGH-EIDSI--NV-SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG-HGPQVITTAD 384 (386)
T ss_dssp ETTTCCEEEEEEEEE-EECEE--EE-CSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC-SSCCEEEECC
T ss_pred ECCCCeEEEEEECCC-CcceE--EE-CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC-CCceeEECCc
Confidence 999999887765432 11222 23 35665 5555 5568999999999998887775422 2245555554
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=1.4e-12 Score=108.83 Aligned_cols=174 Identities=11% Similarity=0.109 Sum_probs=126.2
Q ss_pred CEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc----------eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEE
Q 021459 66 GISDLAWSSDSHYICSASDDRTLRIWDARTPF----------DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWE 135 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd 135 (312)
.++.+++++...++++|+.++ +.+|++.... +.. ....+.. |..++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccce-EEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 588899999999999998875 5669764321 111 1223556 999999 88999988 889999999
Q ss_pred cCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCe
Q 021459 136 VKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDST 215 (312)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 215 (312)
+++.........+..++.++.+.+. .+++++.||.+.+||+.++.... ....+++++|+|+| ++.|..||.
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSC
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 9877665666677888888877655 38889999999999998776543 23468899999999 678889999
Q ss_pred EEEEEcCCCcE--EEEEEc------cCCceeEEEEEEEccCCcEEEE
Q 021459 216 LKLWNYSAGKF--LKIYTG------HTNKKYCITSTFSVTNGKYIVS 254 (312)
Q Consensus 216 i~v~d~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~l~~ 254 (312)
+++|+...++. .+.+.. +......+....+.+++.++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999877764 444421 1011233444444566777665
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.50 E-value=1.6e-10 Score=95.33 Aligned_cols=224 Identities=12% Similarity=0.060 Sum_probs=141.9
Q ss_pred EEEEEEccCC-CeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe
Q 021459 67 ISDLAWSSDS-HYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI 145 (312)
Q Consensus 67 v~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 145 (312)
....+|+|++ .++++...++.|..||..+... ..+. ....+.++.++++++++++. .+ .|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK--TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE--EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 3568899975 4566666788999999876532 2222 24578899999998877654 34 4999999887754332
Q ss_pred eec----CcCeEEEEEccCCCEEEEeeC------CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCC
Q 021459 146 RAH----SMPVTSVHFNRDGSLIVSGSH------DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDS 214 (312)
Q Consensus 146 ~~~----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~ 214 (312)
... ...+..++++|+|+++++... .+.|..++ +++.. .+.. .......++|+|+++.++.+ +.++
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFA-DISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEE-EESSEEEEEECTTSCEEEEEETTTC
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeC-CCcccCCeEEcCCCCEEEEEECCCC
Confidence 211 235789999999997765542 24566666 44332 2211 11234567899999877555 4568
Q ss_pred eEEEEEcC--CC-cE--EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEc-
Q 021459 215 TLKLWNYS--AG-KF--LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCH- 288 (312)
Q Consensus 215 ~i~v~d~~--~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~- 288 (312)
.|.+||+. ++ .. ...+................+++.+.++...++.|..||. +++.+..+..+...+.+++|.
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 99999986 55 31 1122111100011222333456777777767789999998 455666666666679999998
Q ss_pred CCCceEEEeeec
Q 021459 289 PTENKIASAGLD 300 (312)
Q Consensus 289 p~~~~l~~~~~d 300 (312)
|++..|..++..
T Consensus 281 ~d~~~L~vt~~~ 292 (326)
T 2ghs_A 281 PDASRLLVTSAR 292 (326)
T ss_dssp TTSCEEEEEEBC
T ss_pred CCCCEEEEEecC
Confidence 888777555443
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=7.3e-11 Score=96.38 Aligned_cols=228 Identities=12% Similarity=0.137 Sum_probs=145.0
Q ss_pred EeeeccCCEEEEEEccCCC-eEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcC
Q 021459 59 RFVGHSEGISDLAWSSDSH-YICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK 137 (312)
Q Consensus 59 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~ 137 (312)
.+...........|+|+++ ++++...++.|..|+... . ...+..+...+..+.++++++++++...++.|..||..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~--~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T--VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C--EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C--EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 3333445567899999998 666777788999998743 2 23344455678899999999977665566789999976
Q ss_pred CCeEEEEeeec----CcCeEEEEEccCCCEEEE----eeC-------------CCeEEEEeCCCCceeeEcccCCCCcEE
Q 021459 138 TGKCTRVIRAH----SMPVTSVHFNRDGSLIVS----GSH-------------DGTCKIWDAGEGACLKTLIDDKDPAVS 196 (312)
Q Consensus 138 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (312)
++........ ...+..++++|+|+++++ |.. .+.|..+|..+++..... ......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~ 191 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPN 191 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCc
Confidence 5433222111 123567999999998886 432 256788887665543322 122345
Q ss_pred EEEECCCCCEEEEEecC------CeEEEEEcCCCcE--EEEEEc-cCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 197 FAKFSPNGKFILVGTLD------STLKLWNYSAGKF--LKIYTG-HTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 197 ~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
.++|+|+++.|.++... +.|++||+..+.. ...+.. .......+ ...++|++.+ ++.+ .|.+|+..
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi---~~d~~G~lwv-~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF---CVDRGGWLWS-SSGT-GVCVFDSD 266 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE---EECTTSCEEE-CCSS-EEEEECTT
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE---EECCCCCEEE-ecCC-cEEEECCC
Confidence 67899999988777654 7899999876541 111211 11111112 2235677544 4444 49999984
Q ss_pred chheeecccCCccceEEEEEcCCCceEEEeeec
Q 021459 268 QKTMIQKLDGHTDSVISVTCHPTENKIASAGLD 300 (312)
Q Consensus 268 ~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~d 300 (312)
++.+..+..+. .+..++|.|+++.|..++.+
T Consensus 267 -g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 267 -GQLLGHIPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp -SCEEEEEECSS-CCCEEEECTTSCEEEEEETT
T ss_pred -CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 55555555444 57889999998888777643
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.5e-11 Score=102.22 Aligned_cols=255 Identities=12% Similarity=0.100 Sum_probs=157.5
Q ss_pred cceEEEEECCCCCEEEEEe--CCCeEEEEeCCCcceEEEe-------eeccCCEEEEEEccCCCeEEEEcC-----CCeE
Q 021459 23 RAVSCVKFSNDGTLLASAS--LDKTVIIWSASSLALVHRF-------VGHSEGISDLAWSSDSHYICSASD-----DRTL 88 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~--~d~~i~vw~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v 88 (312)
.....++++|+|+++++.. .++.++||.+.+++.. .+ ..+...+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999988863 2343555554444332 22 124467899999999876665433 5789
Q ss_pred EEEeCCCCceeeeeeec------ccccEEEEEEecCCCE-EEEee---cCCcEEEEEcCCCeEEEEeeecCcCeE-EEEE
Q 021459 89 RIWDARTPFDCLKTLRG------HSDFVFCVNFNPQSNL-IVSGS---FDESIRIWEVKTGKCTRVIRAHSMPVT-SVHF 157 (312)
Q Consensus 89 ~~wd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~-l~s~~---~dg~i~~wd~~~~~~~~~~~~~~~~v~-~~~~ 157 (312)
.+||+.++. .+..+.. +......+++++++.. +++-. .++.|.+||+.+++..+.+..|..... ...+
T Consensus 96 ~~~d~~tg~-~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 96 VAWDTLNNQ-LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEETTTTE-EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEECCCCe-EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999988753 2333321 2234578899986544 45544 578899999998887665544321110 1334
Q ss_pred ccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCC-eEEEEEcC---CCc--------
Q 021459 158 NRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDS-TLKLWNYS---AGK-------- 225 (312)
Q Consensus 158 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~---~~~-------- 225 (312)
.++|..+.+.+.++.++.|.. ....++++|+++.|.++..++ .+..++.. .+.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~---------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL---------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp EETTEECBEECTTSCEECCCC---------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred eECCEEEEeccCCCceeceec---------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 456766766777777665531 234578999999888876665 55555532 111
Q ss_pred EEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccC-CccceEEEEEcCCCceEEEee
Q 021459 226 FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG-HTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~p~~~~l~~~~ 298 (312)
.+... ++......+ . ..+++.++++...++.|.+||..+++....... +...+.++++.+++..+++.+
T Consensus 240 ~~~~~-g~~g~pdgi--a-~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 240 KIERY-SEKPICDGI--S-IDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TCEEE-EECCSCSCE--E-ECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred ceEec-ccCCCCceE--E-ECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 01111 111111112 2 235688999999999999999844443222211 245689999999988777765
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=1.1e-10 Score=98.80 Aligned_cols=240 Identities=11% Similarity=0.066 Sum_probs=158.7
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCcceEEEeeec-------cCCEEEEEEccCCCeEEEEcC--CCe
Q 021459 27 CVKFSNDGTLLASAS----------LDKTVIIWSASSLALVHRFVGH-------SEGISDLAWSSDSHYICSASD--DRT 87 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~----------~d~~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~ 87 (312)
.+.++||+++|+.+. .++.|.++|..+++.+..+.-. ......++++|||++|+++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999887775 3678999999999988776532 123457899999999998864 578
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCCCeEEEE----eeecCcCe-EEEEEccCC
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKTGKCTRV----IRAHSMPV-TSVHFNRDG 161 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~----~~~~~~~v-~~~~~~~~~ 161 (312)
|.+.|+.+. +.+..+.-.. +....|++ ..+++.+.||.+.+.++.+++.... +.....++ ..+.+.+++
T Consensus 202 VsVID~~t~-kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 202 VGVVDLEGK-TFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEETTTT-EEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred EEEEECCCC-eEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 999999875 4455444211 12233433 5566677788888778765554321 11112221 234678888
Q ss_pred CEEEEeeCCCeEEEEeCCCCcee--eEcc--cCC-------CCcEEEEEECCCCCEEEEEec----------CCeEEEEE
Q 021459 162 SLIVSGSHDGTCKIWDAGEGACL--KTLI--DDK-------DPAVSFAKFSPNGKFILVGTL----------DSTLKLWN 220 (312)
Q Consensus 162 ~~l~~~~~d~~i~iwd~~~~~~~--~~~~--~~~-------~~~~~~~~~~~~~~~l~~~~~----------d~~i~v~d 220 (312)
..++..+..+.+.+.|....... ..+. ... ......+.++|+++.+.+... ++.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 87777778899999998654321 1110 000 001112468999887777642 35799999
Q ss_pred cCCCcEEEEEEccCCceeEEEEEEEccCCc-EEEEee-cCCeEEEEECCchheeecc
Q 021459 221 YSAGKFLKIYTGHTNKKYCITSTFSVTNGK-YIVSGS-EDNCVYVWDLQQKTMIQKL 275 (312)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 275 (312)
..+.+.+..+..... ...+ .+ .++++ ++++.. .++.|.++|+.+.+.+..+
T Consensus 357 ~~T~kvv~~I~vg~~-P~gi--a~-spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELGHE-IDSI--NV-SQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEEEE-ECEE--EE-CCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECCCC-cCeE--EE-ccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999998887754321 2222 23 46777 777777 6999999999999888776
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=1.5e-09 Score=89.48 Aligned_cols=220 Identities=14% Similarity=0.039 Sum_probs=138.1
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCcee-ee
Q 021459 24 AVSCVKFSNDGT-LLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDC-LK 101 (312)
Q Consensus 24 ~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~-~~ 101 (312)
-..+..|+|++. ++++...++.|.+|+..+++.. .+ .....+.+++|+++++++++. . ..|.+||..++... +.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VH-ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 456789999755 5566667789999998876543 22 235679999999999877765 3 34899998764321 11
Q ss_pred eee-c-ccccEEEEEEecCCCEEEEeec------CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEE-eeCCCe
Q 021459 102 TLR-G-HSDFVFCVNFNPQSNLIVSGSF------DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVS-GSHDGT 172 (312)
Q Consensus 102 ~~~-~-~~~~v~~~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~ 172 (312)
... + ....+..+.++|+++++++... .+.|..++ +++... +.........++|+|+++.++. .+.++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 111 1 1245788999999987665432 24565666 455433 2223334678999999986654 455789
Q ss_pred EEEEeCC--CC-cee--eEc--ccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEE
Q 021459 173 CKIWDAG--EG-ACL--KTL--IDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFS 245 (312)
Q Consensus 173 i~iwd~~--~~-~~~--~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
|.+||.. ++ ... ..+ ..........+.++++|.+.++...++.|..||. +++.+..+..+..... ...+.
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~--~~af~ 279 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTT--CPAFI 279 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEE--EEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcE--EEEEe
Confidence 9999975 44 311 111 1112234566789999987777666789999998 5666666654433222 22333
Q ss_pred ccCCcEEE
Q 021459 246 VTNGKYIV 253 (312)
Q Consensus 246 ~~~~~~l~ 253 (312)
.++++.|.
T Consensus 280 g~d~~~L~ 287 (326)
T 2ghs_A 280 GPDASRLL 287 (326)
T ss_dssp STTSCEEE
T ss_pred cCCCCEEE
Confidence 24555443
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.46 E-value=1.5e-10 Score=104.79 Aligned_cols=258 Identities=14% Similarity=0.115 Sum_probs=163.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeec--cCCEEEEEEcc---CCCeEEEEc------CCCeEEEEeCCCCceeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGH--SEGISDLAWSS---DSHYICSAS------DDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~---~~~~l~~~~------~d~~v~~wd~~~~~~~~~~ 102 (312)
+..|+.++.|+.+..+|..+++.+.+.... ......+..+| ++ .+++++ .++.|..||..++...-..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 567888889999999999999988776542 11111111122 44 444443 3689999999887543221
Q ss_pred ee--c----------------------------ccccEEEEEEecCCCEEEEeecCCc-------------------EEE
Q 021459 103 LR--G----------------------------HSDFVFCVNFNPQSNLIVSGSFDES-------------------IRI 133 (312)
Q Consensus 103 ~~--~----------------------------~~~~v~~~~~~~~~~~l~s~~~dg~-------------------i~~ 133 (312)
.. + +......++++|+.+.++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 10 0 0001125778898889888887753 999
Q ss_pred EEcCCCeEEEEeee--cC-------cCeEEEEEccCCC---EEEEeeCCCeEEEEeCCCCceeeEcccCC----------
Q 021459 134 WEVKTGKCTRVIRA--HS-------MPVTSVHFNRDGS---LIVSGSHDGTCKIWDAGEGACLKTLIDDK---------- 191 (312)
Q Consensus 134 wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------- 191 (312)
+|.++|+.+-.++. |. .+........+|+ .++.++.+|.++++|..+++.+.......
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999998876654 21 1122222223565 78899999999999999998763221110
Q ss_pred -----------------CC-----------cEEEEEECCCCCEEEEEec-------------------------------
Q 021459 192 -----------------DP-----------AVSFAKFSPNGKFILVGTL------------------------------- 212 (312)
Q Consensus 192 -----------------~~-----------~~~~~~~~~~~~~l~~~~~------------------------------- 212 (312)
.. ....++++|+..++.+...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 00 0011467888777776532
Q ss_pred --------------CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCC
Q 021459 213 --------------DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGH 278 (312)
Q Consensus 213 --------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h 278 (312)
+|.|+.||+.+++.+-.+..+...... ... ..+.+++.|+.||.++.||.++++.+-+++..
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g---~~~-tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG---TLS-TAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCC---EEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCc---cce-ECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 377999999999987666544322111 111 34678888999999999999999988766533
Q ss_pred cc-ceEEEEEcCCCceEEE
Q 021459 279 TD-SVISVTCHPTENKIAS 296 (312)
Q Consensus 279 ~~-~v~~l~~~p~~~~l~~ 296 (312)
.. ...-+.+..+|+++++
T Consensus 516 ~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcccCceEEEECCEEEEE
Confidence 22 2234566778775554
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.44 E-value=6.1e-11 Score=107.80 Aligned_cols=237 Identities=14% Similarity=0.129 Sum_probs=143.8
Q ss_pred ccCCEEEEEEccCCCeEEEE-----cCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCc-------
Q 021459 63 HSEGISDLAWSSDSHYICSA-----SDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDES------- 130 (312)
Q Consensus 63 ~~~~v~~~~~~~~~~~l~~~-----~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~------- 130 (312)
|...+..++|+|||++|+-+ +....|++||+.++......+.. .....++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 44567889999999988843 23357999999886432222221 112467899 9999888877743
Q ss_pred ------EEEEEcCCCeE--EEEee--e-cCcCeEEEEEccCCCEEEEeeC----CCeEEEEeCCCCc-eeeEcccCCCCc
Q 021459 131 ------IRIWEVKTGKC--TRVIR--A-HSMPVTSVHFNRDGSLIVSGSH----DGTCKIWDAGEGA-CLKTLIDDKDPA 194 (312)
Q Consensus 131 ------i~~wd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~-~~~~~~~~~~~~ 194 (312)
|++|++.+++. ...+. . +......+.|+|||++++.... ++.+.++|+.++. ....+.......
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 99999977643 22232 2 3344678999999998764332 3589999987653 233333333332
Q ss_pred EEEEEECCCCCEEEEEec----CCeEEEEEcCCCcE--EEEEEccCCceeEEEEEEEccCCcEEEE-eecCC--eEEEEE
Q 021459 195 VSFAKFSPNGKFILVGTL----DSTLKLWNYSAGKF--LKIYTGHTNKKYCITSTFSVTNGKYIVS-GSEDN--CVYVWD 265 (312)
Q Consensus 195 ~~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~dg--~i~iwd 265 (312)
.. . ++++|..|+..+. .+.|..+|+.++.. ...+..+.... + .+. ++++.|+. ...+| .|.+||
T Consensus 284 ~~-~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~--~~s-~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 284 VS-L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV--L--TVH-SGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp EE-E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC--E--EEE-EETTEEEEEEEETTEEEEEEEC
T ss_pred EE-E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE--E--EEE-EECCEEEEEEEECCeeEEEEEE
Confidence 22 2 5666666655443 36799999887643 23444444432 2 333 34555554 44555 688898
Q ss_pred CCchheeeccc-CCccceEEEEEcCCCceEEEeeec--CCeeEEEEee
Q 021459 266 LQQKTMIQKLD-GHTDSVISVTCHPTENKIASAGLD--GDRTVRVWVQ 310 (312)
Q Consensus 266 ~~~~~~~~~~~-~h~~~v~~l~~~p~~~~l~~~~~d--gd~~v~iw~~ 310 (312)
+..+. ...+. .....+..+.++|++..++....+ .-.++..|++
T Consensus 357 ~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 357 YEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp TTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 87543 33332 234567778888888776655432 2246666654
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.39 E-value=6.3e-10 Score=100.54 Aligned_cols=259 Identities=14% Similarity=0.079 Sum_probs=165.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEeeec-c----CCEEE-EEEccCCCeEEEEcC------CCeEEEEeCCCCceee
Q 021459 33 DGTLLASASLDKTVIIWSASSLALVHRFVGH-S----EGISD-LAWSSDSHYICSASD------DRTLRIWDARTPFDCL 100 (312)
Q Consensus 33 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------d~~v~~wd~~~~~~~~ 100 (312)
++..|+.++.|+.+..+|..+++.+.++... . ..+.+ ... .+..+++++. ++.|+.+|..++...-
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3567888889999999999999998877654 1 11211 111 2345555543 6899999998865432
Q ss_pred eeeecc-------------------------------cccEEEEEEecCCCEEEEeecCC-------------------c
Q 021459 101 KTLRGH-------------------------------SDFVFCVNFNPQSNLIVSGSFDE-------------------S 130 (312)
Q Consensus 101 ~~~~~~-------------------------------~~~v~~~~~~~~~~~l~s~~~dg-------------------~ 130 (312)
+..... ......++++|+++.++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 211100 00112567889888888777654 4
Q ss_pred EEEEEcCCCeEEEEeee--cC-------cCeEEEEEccCC---CEEEEeeCCCeEEEEeCCCCceeeEcccCCCC-----
Q 021459 131 IRIWEVKTGKCTRVIRA--HS-------MPVTSVHFNRDG---SLIVSGSHDGTCKIWDAGEGACLKTLIDDKDP----- 193 (312)
Q Consensus 131 i~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----- 193 (312)
|..+|.++|+..-.++. |. .....+....+| ..++.++.+|.+.++|..+++.+.........
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999999998776653 21 112223333467 68899999999999999999876544211100
Q ss_pred -----cE------------------------EEEEECCCCCEEEEEec--------------------------------
Q 021459 194 -----AV------------------------SFAKFSPNGKFILVGTL-------------------------------- 212 (312)
Q Consensus 194 -----~~------------------------~~~~~~~~~~~l~~~~~-------------------------------- 212 (312)
.+ ..++++|+..++.+...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 00 12467888888877543
Q ss_pred -----------CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCC-cc
Q 021459 213 -----------DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGH-TD 280 (312)
Q Consensus 213 -----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~ 280 (312)
.+.|..||+.+++.+..+...... ... ... ..+.+++.++.||.+++||..+++.+..+... ..
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~g--~~~-~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 520 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW-NGG--TLT-TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV 520 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC-CCC--EEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC-cCc--ceE-eCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc
Confidence 278999999999877665433211 111 111 34667888899999999999999888776532 22
Q ss_pred ceEEEEEcCCCceEEEe
Q 021459 281 SVISVTCHPTENKIASA 297 (312)
Q Consensus 281 ~v~~l~~~p~~~~l~~~ 297 (312)
...-+.+.++|+.+++.
T Consensus 521 ~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred ccCCEEEEeCCEEEEEE
Confidence 22344566788765544
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=1.2e-10 Score=97.01 Aligned_cols=245 Identities=10% Similarity=0.034 Sum_probs=155.6
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEeCCCcceEEEeeec-------cCCEEEEEEccCCCeEEEEcC--CCe
Q 021459 27 CVKFSNDGTLLASAS----------LDKTVIIWSASSLALVHRFVGH-------SEGISDLAWSSDSHYICSASD--DRT 87 (312)
Q Consensus 27 ~~~~s~~~~~l~t~~----------~d~~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~ 87 (312)
.+.++||+++++.+. .++.|.+||..+++.+..+... ......++++|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888875 3688999999999998888643 123457999999999998864 457
Q ss_pred EEE--EeCCCCceeeeeeecccccEEEEEEecCC-CEEEEeecCCcEEEEEcCC-----CeEEE----EeeecCcCeEEE
Q 021459 88 LRI--WDARTPFDCLKTLRGHSDFVFCVNFNPQS-NLIVSGSFDESIRIWEVKT-----GKCTR----VIRAHSMPVTSV 155 (312)
Q Consensus 88 v~~--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~~wd~~~-----~~~~~----~~~~~~~~v~~~ 155 (312)
+.+ +|..+ +..+.-. +. ....|++ ..+++.+.||.+.+.|+.+ ++... .+.....+.
T Consensus 149 v~V~~iD~~t----v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--- 217 (368)
T 1mda_H 149 AGLSVPGASD----DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--- 217 (368)
T ss_dssp EEEEETTTEE----EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---
T ss_pred EEEEEEchhh----ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---
Confidence 888 88765 2222211 10 1123443 3455667788888888876 33221 111122333
Q ss_pred EEccCCCEEEEeeCCCeEEEEeCCCCc--eeeEcccC------CC---CcEEEEEECCCCCEEEEEec-C--------Ce
Q 021459 156 HFNRDGSLIVSGSHDGTCKIWDAGEGA--CLKTLIDD------KD---PAVSFAKFSPNGKFILVGTL-D--------ST 215 (312)
Q Consensus 156 ~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~------~~---~~~~~~~~~~~~~~l~~~~~-d--------~~ 215 (312)
. .+++..++..+. +.+.+.|..... ....+... .. .....+.++|+++.+.++.. . +.
T Consensus 218 ~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 218 Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 3 566666666666 899999986532 22211100 00 00111468999998887643 2 35
Q ss_pred EEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCc-EEEEee-cCCeEEEEECCchheeecccCCccceEEEEEcC
Q 021459 216 LKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK-YIVSGS-EDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHP 289 (312)
Q Consensus 216 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p 289 (312)
+.++|..+.+.+..+.... ....+ .+ .++++ ++++.. .++.|.++|+.+.+.+..+..... ...+++++
T Consensus 296 ~~ViD~~t~~vv~~i~vg~-~p~gi--~~-s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGH-DSDAI--IA-AQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEESSSCCEEECCEEEE-EECEE--EE-CCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred EEEEECCCCeEEEEEECCC-CcceE--EE-CCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 6799999998877654332 12222 33 35666 566666 699999999999999988875443 35666654
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.36 E-value=3.1e-13 Score=113.45 Aligned_cols=188 Identities=13% Similarity=0.081 Sum_probs=106.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc-ccEE
Q 021459 33 DGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHS-DFVF 111 (312)
Q Consensus 33 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~-~~v~ 111 (312)
++..+++++.|+.|+.||..+++.+.++.. ..+.+..+..++..+++++.|+.|+.||..++.. +.....+. ..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCccccc
Confidence 578899999999999999999999887775 4555555566777888888999999999876533 22222221 1110
Q ss_pred -EEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccC
Q 021459 112 -CVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDD 190 (312)
Q Consensus 112 -~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (312)
+..+. ++..+++++.++.|+.||.++|+.+..+..+. ...++|++..+++++.++.+..||.++++..-++...
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 01111 34567888889999999999998876665443 2345678888999999999999999988765433211
Q ss_pred CCCcEEEEEECCCC---CEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 191 KDPAVSFAKFSPNG---KFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 191 ~~~~~~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
. .....++++. ..+++++.+|.|+.||..+++.+..+.
T Consensus 160 ~---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 160 D---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp E---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred c---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 0 1111123321 457778899999999999998766554
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.34 E-value=1.1e-10 Score=97.19 Aligned_cols=248 Identities=9% Similarity=-0.016 Sum_probs=155.1
Q ss_pred eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc----------CCCeEEEEeCCCCceeeeeeecc-------c
Q 021459 45 TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS----------DDRTLRIWDARTPFDCLKTLRGH-------S 107 (312)
Q Consensus 45 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~~wd~~~~~~~~~~~~~~-------~ 107 (312)
.|.+.|..+++.+.++..-..+ .+.++||+++++++. .++.|.+||+.+. +.+..+... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCccccccC
Confidence 8889999999999988765556 799999999988886 3678999999885 445554322 0
Q ss_pred ccEEEEEEecCCCEEEEeec--CCcEEE--EEcCCCeEEEEeeecCcCeEEEEEccCC-CEEEEeeCCCeEEEEeCCC--
Q 021459 108 DFVFCVNFNPQSNLIVSGSF--DESIRI--WEVKTGKCTRVIRAHSMPVTSVHFNRDG-SLIVSGSHDGTCKIWDAGE-- 180 (312)
Q Consensus 108 ~~v~~~~~~~~~~~l~s~~~--dg~i~~--wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~-- 180 (312)
..-..+.++||+++++.+.. +..|.+ +|+.+ ...+..... ..+.|++ ..+++.+.|+.+.+.|..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 12346889999999998875 356888 88877 333332111 1123443 3455666788888888876
Q ss_pred ---CceeeE----cccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCc--EEEEEEccC-----CceeEEE---EE
Q 021459 181 ---GACLKT----LIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGK--FLKIYTGHT-----NKKYCIT---ST 243 (312)
Q Consensus 181 ---~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~-----~~~~~~~---~~ 243 (312)
++.... +.....+ . . .+++..++..+. +.|.+.|..... .+..+.... ....... ..
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P-~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQA-A---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCC-E---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ccCCeEEEEeeeeeeCCCCc-c---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 332211 1111122 2 2 455566666656 899999986532 222221100 0000000 12
Q ss_pred EEccCCcEEEEeec---------CCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 244 FSVTNGKYIVSGSE---------DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 244 ~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
+. ++++.+..+.. ++.+.++|+.+.+.+..+.... ....++++|++++++.+...++++|.++|.
T Consensus 271 ~s-~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 271 KL-KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp EE-TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred Ec-CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 33 55655554322 2356699999998888876443 578999999998766655434578999886
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.32 E-value=3.8e-09 Score=88.78 Aligned_cols=259 Identities=10% Similarity=0.040 Sum_probs=156.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccE--
Q 021459 33 DGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFV-- 110 (312)
Q Consensus 33 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v-- 110 (312)
++..++.++.++.|..+|..+++.+.+............. .+..++.++.++.+..+|..++... -.........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~-W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVK-WTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEE-EEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEE-EEEeCCCCceee
Confidence 4556777888999999999999887766543322112222 2447777888999999999876433 2222111100
Q ss_pred ---EEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcC----eE---EEEEcc--CCCEEEEeeCCCeEEEEeC
Q 021459 111 ---FCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMP----VT---SVHFNR--DGSLIVSGSHDGTCKIWDA 178 (312)
Q Consensus 111 ---~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~l~~~~~d~~i~iwd~ 178 (312)
...... +..++.+..++.|..+|..+++........... +. .+...| .+..++.++.++.+..+|.
T Consensus 179 ~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 179 RGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred cCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 111122 456788888999999999999876554422100 00 000111 2456777788999999999
Q ss_pred CCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce-eEEEEEEEccCCcEEEEeec
Q 021459 179 GEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK-YCITSTFSVTNGKYIVSGSE 257 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 257 (312)
.+++..-.... ........ ++..+.+++.++.|..+|..+++.+.......... .... . .+..|+.++.
T Consensus 257 ~tG~~~w~~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~--~---~~~~l~v~~~ 326 (376)
T 3q7m_A 257 RSGQIMWKREL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPV--L---YNGNLVVGDS 326 (376)
T ss_dssp TTCCEEEEECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCE--E---ETTEEEEECT
T ss_pred CCCcEEeeccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCE--E---ECCEEEEEeC
Confidence 98876654322 11222222 45678888889999999999998765554211111 1111 1 2457888889
Q ss_pred CCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 258 DNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 258 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
+|.|.++|..+++.+.........+...... .+..|..++.+ +.|..|+
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~--G~l~~~~ 375 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKD--GTVYSIT 375 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTT--SCEEEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCC--CEEEEEe
Confidence 9999999999888766554322222211111 24566667755 4666664
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=2.1e-09 Score=97.36 Aligned_cols=194 Identities=14% Similarity=0.169 Sum_probs=122.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCC----------E-EEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEG----------I-SDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
+..|+.++.++.|..+|..+++.+.++...... + ..+++ .+..+++++.|+.|..+|..++...-+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 556777778899999999999988876543210 1 11222 3567888889999999999887544322
Q ss_pred eec-ccccEEEEEEec--CCCEEEEee------cCCcEEEEEcCCCeEEEEeeecC------------------------
Q 021459 103 LRG-HSDFVFCVNFNP--QSNLIVSGS------FDESIRIWEVKTGKCTRVIRAHS------------------------ 149 (312)
Q Consensus 103 ~~~-~~~~v~~~~~~~--~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~------------------------ 149 (312)
... +......+..+| .+..++.+. .+|.|..||.++|+.+-.+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 211 111000011111 123444443 36899999999998776554210
Q ss_pred -------cCeEEEEEccCCCEEEEeeCCCe-------------------EEEEeCCCCceeeEcccC-C-------CCcE
Q 021459 150 -------MPVTSVHFNRDGSLIVSGSHDGT-------------------CKIWDAGEGACLKTLIDD-K-------DPAV 195 (312)
Q Consensus 150 -------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iwd~~~~~~~~~~~~~-~-------~~~~ 195 (312)
.....++++|++.+++.++.++. |..+|..+++..-.+... + ....
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 01125678888888888887763 999999999876554321 1 1112
Q ss_pred EEEEECCCCC---EEEEEecCCeEEEEEcCCCcEEEE
Q 021459 196 SFAKFSPNGK---FILVGTLDSTLKLWNYSAGKFLKI 229 (312)
Q Consensus 196 ~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~ 229 (312)
.......+|+ .++.++.+|.++++|..+|+.+..
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 2222223554 788899999999999999998743
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.29 E-value=7.5e-09 Score=86.96 Aligned_cols=261 Identities=7% Similarity=0.002 Sum_probs=154.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCcceEEEeeecc---------CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeee
Q 021459 33 DGTLLASASLDKTVIIWSASSLALVHRFVGHS---------EGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTL 103 (312)
Q Consensus 33 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~ 103 (312)
.+..++.++.++.|..+|..+++.+....... ..+... ...++..+++++.++.|..+|..++...- ..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W-~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW-QT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE-EE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE-EE
Confidence 35678888888999999999998876655421 222221 12245677778889999999998764332 22
Q ss_pred ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCe-----EEEEEccCCCEEEEeeCCCeEEEEeC
Q 021459 104 RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPV-----TSVHFNRDGSLIVSGSHDGTCKIWDA 178 (312)
Q Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (312)
............. +..++.++.++.|..+|.++++.+.......... ..... .+..++.++.++.+..+|.
T Consensus 130 ~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 130 KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEET
T ss_pred eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEEC
Confidence 2211111111122 4577788889999999999998776554322111 11122 2346778888999999999
Q ss_pred CCCceeeEcccCCCCcE---EE---EEECC--CCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCc
Q 021459 179 GEGACLKTLIDDKDPAV---SF---AKFSP--NGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGK 250 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~---~~---~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
.+++..-.......... .. ....| .+..+.+++.++.+..+|..+++.+..... ...... . ..+.
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~----~-~~~~ 278 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDF----I-VDGN 278 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEE----E-EETT
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCc----e-EECC
Confidence 98877654432110000 00 00011 245777788899999999999987654432 111111 1 1255
Q ss_pred EEEEeecCCeEEEEECCchheeecccC-CccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 251 YIVSGSEDNCVYVWDLQQKTMIQKLDG-HTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 251 ~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
.+..++.+|.|..+|..+++..-.... ....+..... .+..|..++.+ +.|..++.
T Consensus 279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~--g~l~~~d~ 335 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSE--GYLHWINV 335 (376)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTT--SEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCC--CeEEEEEC
Confidence 777788899999999988876544431 1111122222 23456666543 45666553
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.29 E-value=1.4e-12 Score=109.49 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=109.0
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCc-CeE
Q 021459 75 DSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM-PVT 153 (312)
Q Consensus 75 ~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~ 153 (312)
++..+++++.|+.|+.||..++.. +-.... +.+.+..+..++..+++++.||.|+.||.++++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~-~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI-KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE-EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 577889999999999999988744 333333 3344444556677888888999999999988876554432211 010
Q ss_pred -EEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc
Q 021459 154 -SVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG 232 (312)
Q Consensus 154 -~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 232 (312)
...+. ++..+++++.++.+..||..+++....+.... ....+|++..+++++.++.|+.||.++++.+..+..
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 00111 34567788899999999999988765543221 123456888899999999999999998876543321
Q ss_pred cCCceeEEEEEEEccC---CcEEEEeecCCeEEEEECCchheeecccCCccceEE-EEEcCCCc
Q 021459 233 HTNKKYCITSTFSVTN---GKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVIS-VTCHPTEN 292 (312)
Q Consensus 233 ~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~-l~~~p~~~ 292 (312)
..... . . ...+ ...+++++.||.|..||..+++.+-... ...++.. ..+++++.
T Consensus 159 ~~~~~--~--~-~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FDYAA--S--L-PEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp EEECC--B--C-CCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred ccccC--c--c-ccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 11000 0 0 0111 1456778899999999999887765544 2334433 34555553
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.28 E-value=9.2e-08 Score=76.29 Aligned_cols=250 Identities=9% Similarity=-0.023 Sum_probs=147.2
Q ss_pred CEEEEEeCCCeEEEEeCCCcce-----EEEeeeccCCEEEEEEccCCCeEEE-EcCCCeEEEEeCCCCceeeeeeecccc
Q 021459 35 TLLASASLDKTVIIWSASSLAL-----VHRFVGHSEGISDLAWSSDSHYICS-ASDDRTLRIWDARTPFDCLKTLRGHSD 108 (312)
Q Consensus 35 ~~l~t~~~d~~i~vw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~~wd~~~~~~~~~~~~~~~~ 108 (312)
++|+.+.. +.|+.++...... ...+......+..++|++++..|+. -...+.|..+++.... ..........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCC
Confidence 34545443 4677777765432 1112222245678999997665554 4456789999986532 1222222223
Q ss_pred cEEEEEEecCCCEEEEe-ecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeC---CCeEEEEeCCCCcee
Q 021459 109 FVFCVNFNPQSNLIVSG-SFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSH---DGTCKIWDAGEGACL 184 (312)
Q Consensus 109 ~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~ 184 (312)
....+++++++..++.+ ...+.|.++++..................++++|++..+..+.. .+.|..+++... ..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~ 158 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NR 158 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-Cc
Confidence 56789999976555544 45678999998654322222222235688999996555544443 467888876532 22
Q ss_pred eEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEE
Q 021459 185 KTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYV 263 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 263 (312)
..+..........+++++++..|..+ ...+.|.++|............ ......+ .. .++.++++...++.|..
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi--~~--d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAV--TS--YGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEE--EE--ETTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEE--EE--eCCEEEEEECCCCeEEE
Confidence 22222222345667899987766555 4568999999865443333332 1222222 22 34556666667799999
Q ss_pred EECCchheeecccCCc-cceEEEEEcCCCc
Q 021459 264 WDLQQKTMIQKLDGHT-DSVISVTCHPTEN 292 (312)
Q Consensus 264 wd~~~~~~~~~~~~h~-~~v~~l~~~p~~~ 292 (312)
+|..+++.+..+.... .....+++.|++.
T Consensus 234 ~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 234 MDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EeCCCCCceEEEccccccccceeeecCccC
Confidence 9998887777765432 2357788888764
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=3.2e-09 Score=95.97 Aligned_cols=268 Identities=12% Similarity=0.094 Sum_probs=166.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCC----------E-EEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEG----------I-SDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
+..|+.++.++.|..+|..+++.+.++...... + ..+++ ++..|++++.|+.|..+|..++...- .
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W-~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVW-H 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE-E
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEe-e
Confidence 456667777889999999999988776543210 1 12222 45678888899999999998875432 2
Q ss_pred eecc-c----ccEE-EEEEecCCCEEEEeec------CCcEEEEEcCCCeEEEEeeecCcC-------------------
Q 021459 103 LRGH-S----DFVF-CVNFNPQSNLIVSGSF------DESIRIWEVKTGKCTRVIRAHSMP------------------- 151 (312)
Q Consensus 103 ~~~~-~----~~v~-~~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~------------------- 151 (312)
.... . ..+. .... .+..++.++. ++.|+.+|.++|+.+-.+......
T Consensus 154 ~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 2222 1 1111 1111 1345555543 689999999999887655432111
Q ss_pred -------------eEEEEEccCCCEEEEeeCCC-------------------eEEEEeCCCCceeeEcccCC--------
Q 021459 152 -------------VTSVHFNRDGSLIVSGSHDG-------------------TCKIWDAGEGACLKTLIDDK-------- 191 (312)
Q Consensus 152 -------------v~~~~~~~~~~~l~~~~~d~-------------------~i~iwd~~~~~~~~~~~~~~-------- 191 (312)
...++++|++..++.++.++ .|..+|..+++..-.+....
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 12467888888888877664 48999999988765543211
Q ss_pred CCcEEEEEECCCC---CEEEEEecCCeEEEEEcCCCcEEEEEEccCCce--------eEE--------------------
Q 021459 192 DPAVSFAKFSPNG---KFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK--------YCI-------------------- 240 (312)
Q Consensus 192 ~~~~~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--------~~~-------------------- 240 (312)
...........+| +.++.++.+|.++++|..+++.+..+....... ..+
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 1112222333467 678899999999999999999876554221100 000
Q ss_pred -----EEEEEccCCcEEEEeec-------------------------------------------CCeEEEEECCchhee
Q 021459 241 -----TSTFSVTNGKYIVSGSE-------------------------------------------DNCVYVWDLQQKTMI 272 (312)
Q Consensus 241 -----~~~~~~~~~~~l~~~~~-------------------------------------------dg~i~iwd~~~~~~~ 272 (312)
...+. ++..++++... .|.|..||+.+++.+
T Consensus 392 ~~~w~~~a~d-p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 392 AHNWHPMSFN-PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp SSCSSCCEEE-TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred ccCCCCceEc-CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 01122 34445544322 278999999988776
Q ss_pred ecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 273 QKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 273 ~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
-.++ +..++....+...+..++.++ .++.+++|+.
T Consensus 471 W~~~-~~~~~~~g~~~~~g~~v~~g~--~dg~l~a~D~ 505 (677)
T 1kb0_A 471 WSVE-HVSPWNGGTLTTAGNVVFQGT--ADGRLVAYHA 505 (677)
T ss_dssp EEEE-ESSSCCCCEEEETTTEEEEEC--TTSEEEEEET
T ss_pred eecC-CCCCCcCcceEeCCCEEEEEC--CCCcEEEEEC
Confidence 5554 233344455666777777776 4568888875
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=9.9e-08 Score=80.24 Aligned_cols=223 Identities=12% Similarity=0.153 Sum_probs=139.2
Q ss_pred cCCCeEE-EEcCCCeEEEEeCCCCc---eeeeeee------ccc-ccEEEEEEecCCCEEEEeecC------CcEEEEEc
Q 021459 74 SDSHYIC-SASDDRTLRIWDARTPF---DCLKTLR------GHS-DFVFCVNFNPQSNLIVSGSFD------ESIRIWEV 136 (312)
Q Consensus 74 ~~~~~l~-~~~~d~~v~~wd~~~~~---~~~~~~~------~~~-~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~ 136 (312)
+++++|+ .+..++.|.++|+.+.. +..+.++ ... ..-..+...|++ .++++..+ |.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6777665 45667899999986421 2333332 001 122345667998 77766555 78999999
Q ss_pred CCCeEEEEeeecCcC---eEEEEEccCCCEEEEee-------------------CCCeEEEEeCCCCceeeEcccC-CCC
Q 021459 137 KTGKCTRVIRAHSMP---VTSVHFNRDGSLIVSGS-------------------HDGTCKIWDAGEGACLKTLIDD-KDP 193 (312)
Q Consensus 137 ~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~-~~~ 193 (312)
++.+.+..+.....+ -+.+.|+|+++.+++.. ...+|.+||+.+++...++... ...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999988877633222 34688899999888874 3689999999988776665432 112
Q ss_pred cEEEEEE--CCCCCEEEEEe------cCCeEEEEEcCCCcEE--EEEEccCC----------------ceeEEEEEEEcc
Q 021459 194 AVSFAKF--SPNGKFILVGT------LDSTLKLWNYSAGKFL--KIYTGHTN----------------KKYCITSTFSVT 247 (312)
Q Consensus 194 ~~~~~~~--~~~~~~l~~~~------~d~~i~v~d~~~~~~~--~~~~~~~~----------------~~~~~~~~~~~~ 247 (312)
....+.| +|+++++.++. .+++|.+|....++.. +.+..... ... .......+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~-pa~I~lS~ 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL-VTDIDISL 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC-CCCEEECT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc-eeEEEECC
Confidence 2223334 99999888776 4678988877665432 11110000 001 11122346
Q ss_pred CCcEEEEe-ecCCeEEEEECCch---heeecccCC-----------c---cceEEEEEcCCCceEEEee
Q 021459 248 NGKYIVSG-SEDNCVYVWDLQQK---TMIQKLDGH-----------T---DSVISVTCHPTENKIASAG 298 (312)
Q Consensus 248 ~~~~l~~~-~~dg~i~iwd~~~~---~~~~~~~~h-----------~---~~v~~l~~~p~~~~l~~~~ 298 (312)
++++|.++ -..+.|.+||+... +++..+.-. . ..-..++++|+|++|.++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 78877554 45789999998532 333333211 0 1247889999999998887
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=3.3e-09 Score=88.02 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=128.0
Q ss_pred ccccceEEEEECCCCCEEEEEeC-----CCeEEEEeCCCcceEEEeeec------cCCEEEEEEccCCCeE-EEEc---C
Q 021459 20 AHSRAVSCVKFSNDGTLLASASL-----DKTVIIWSASSLALVHRFVGH------SEGISDLAWSSDSHYI-CSAS---D 84 (312)
Q Consensus 20 ~h~~~v~~~~~s~~~~~l~t~~~-----d~~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~~~---~ 84 (312)
.|...+.++++++++++.++-.. ++.|.+||..+++.+..+... ...+..+++++++..+ ++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999886665433 578999999988876665432 2346889999865444 4444 5
Q ss_pred CCeEEEEeCCCCceeeeeeecc-----------------------------cccEEEEEEecCCCEEEEeecCC-cEEEE
Q 021459 85 DRTLRIWDARTPFDCLKTLRGH-----------------------------SDFVFCVNFNPQSNLIVSGSFDE-SIRIW 134 (312)
Q Consensus 85 d~~v~~wd~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~s~~~dg-~i~~w 134 (312)
++.|.+||+.+.. ..+.+.+| ...+..++++|+++.|+.+...+ .+..+
T Consensus 144 ~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 144 KAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCeEEEEECCCCC-EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 7889999987542 22222221 01357799999999888877665 45545
Q ss_pred EcC---CCe-----EEE--EeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCC
Q 021459 135 EVK---TGK-----CTR--VIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNG 204 (312)
Q Consensus 135 d~~---~~~-----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
+.. .+. ... ....+......++++++|.++++...++.|.+||..+++...............+++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 432 110 000 1112233456789999999999998999999999855543222211112346677898988
Q ss_pred CEEEEEecCCeEEEE
Q 021459 205 KFILVGTLDSTLKLW 219 (312)
Q Consensus 205 ~~l~~~~~d~~i~v~ 219 (312)
.++++.+..+.+.+|
T Consensus 303 ~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 303 YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEEECCGGGSGGG
T ss_pred cEEEEeCcccccccc
Confidence 877777655444333
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=1.2e-07 Score=74.78 Aligned_cols=206 Identities=12% Similarity=0.047 Sum_probs=137.1
Q ss_pred ceeceeeeccccc--ceEEEEECCCCCEEEEEeC--CCeEEEEeCCCcceEEEeeeccC-CEEEEEEccCCCeEE-EEcC
Q 021459 11 PYRHFKTLTAHSR--AVSCVKFSNDGTLLASASL--DKTVIIWSASSLALVHRFVGHSE-GISDLAWSSDSHYIC-SASD 84 (312)
Q Consensus 11 ~~~~~~~~~~h~~--~v~~~~~s~~~~~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~-~~~~ 84 (312)
.++...++ .|.. ....+.|+|++.+.++.+. ++.|++.|..+++.+..+.-... ....+++. ++.|. +.-.
T Consensus 8 ~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 8 IVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 34555555 4553 3689999998765555543 57999999999998887653221 22345554 44444 4456
Q ss_pred CCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec--Cc---CeEEEEEcc
Q 021459 85 DRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH--SM---PVTSVHFNR 159 (312)
Q Consensus 85 d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~~---~v~~~~~~~ 159 (312)
++.+.++|..+. +.+..+......- ..+.+|++.++.+..++.|.+.|..+.+....+... .. ..+.+.|.
T Consensus 85 ~~~v~viD~~t~-~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 KNIGFIYDRRTL-SNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp CSEEEEEETTTT-EEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred CCEEEEEECCCC-cEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 789999999874 4455553221111 234567777777777889999999998877766532 12 25677887
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCceeeEcccC------------CCCcEEEEEECCCCCEEEE-EecCCeEEEEEcCC
Q 021459 160 DGSLIVSGSHDGTCKIWDAGEGACLKTLIDD------------KDPAVSFAKFSPNGKFILV-GTLDSTLKLWNYSA 223 (312)
Q Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~ 223 (312)
+++.++....++.|.+.|..+++.+..+... .......++++|+++.+.+ +...+.|.+.++..
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 7776666667889999999999887766321 1124567889999875554 55677888887654
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.18 E-value=6.5e-08 Score=81.32 Aligned_cols=190 Identities=12% Similarity=0.156 Sum_probs=123.6
Q ss_pred CCCCEEEE-EeCCCeEEEEeCCCc----ceEEEee------ec-cCCEEEEEEccCCCeEEEEcCC------CeEEEEeC
Q 021459 32 NDGTLLAS-ASLDKTVIIWSASSL----ALVHRFV------GH-SEGISDLAWSSDSHYICSASDD------RTLRIWDA 93 (312)
Q Consensus 32 ~~~~~l~t-~~~d~~i~vw~~~~~----~~~~~~~------~~-~~~v~~~~~~~~~~~l~~~~~d------~~v~~wd~ 93 (312)
+++++|+. +..++.|.|+|+.+. +....++ .. ...-..+...|+| +++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77876654 566789999998754 4444442 01 1134567788999 66666555 78999998
Q ss_pred CCCceeeeeeecc---cccEEEEEEecCCCEEEEee-------------------cCCcEEEEEcCCCeEEEEeeec-C-
Q 021459 94 RTPFDCLKTLRGH---SDFVFCVNFNPQSNLIVSGS-------------------FDESIRIWEVKTGKCTRVIRAH-S- 149 (312)
Q Consensus 94 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~-------------------~dg~i~~wd~~~~~~~~~~~~~-~- 149 (312)
.+. +.+..+... ...-..+.|+|+++.+++.. .+.+|.+||+.+++.+..+... .
T Consensus 172 ~T~-~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSF-EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTC-CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCC-eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 874 455555421 12234577899999999885 3688999999998877766542 1
Q ss_pred cCeEEEEE--ccCCCEEEEeeC------CCeEEEEeCCCCcee--eEc--ccC---------------CCCcEEEEEECC
Q 021459 150 MPVTSVHF--NRDGSLIVSGSH------DGTCKIWDAGEGACL--KTL--IDD---------------KDPAVSFAKFSP 202 (312)
Q Consensus 150 ~~v~~~~~--~~~~~~l~~~~~------d~~i~iwd~~~~~~~--~~~--~~~---------------~~~~~~~~~~~~ 202 (312)
.....+.| +|+++++.++.. +++|.+|....+... ..+ ... .......+.+++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23345555 999998877764 557766544333211 100 000 012345567999
Q ss_pred CCCEEEEEec-CCeEEEEEcCC
Q 021459 203 NGKFILVGTL-DSTLKLWNYSA 223 (312)
Q Consensus 203 ~~~~l~~~~~-d~~i~v~d~~~ 223 (312)
||++|.++.. .+.|.+||+..
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCEEEEEEecC
Confidence 9999988754 68999999863
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.17 E-value=2.9e-09 Score=87.55 Aligned_cols=263 Identities=14% Similarity=0.087 Sum_probs=152.2
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeee
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLK 101 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~ 101 (312)
...+.++...+++.+.+ ++.+ +..+|. +++.+..+...........+. +..|..++.++.+..+|.. +.. ..
T Consensus 59 ~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~-~~ 130 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTE-KW 130 (330)
T ss_dssp GEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCE-EE
T ss_pred CCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCE-EE
Confidence 34456667766665443 3333 777775 444333222222222233333 4567778888999999987 433 32
Q ss_pred eeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCC
Q 021459 102 TLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEG 181 (312)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (312)
........+.++...+++. ++.++.++.|..+|.. ++....+......+.++...+++.+++.. +.+..+| .++
T Consensus 131 ~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g 204 (330)
T 3hxj_A 131 RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDG 204 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTS
T ss_pred EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCC
Confidence 3333334455556666665 5556777899999988 77665555545556777777788765544 7889999 666
Q ss_pred ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeE
Q 021459 182 ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCV 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 261 (312)
+........ ...+..+..+++|. |.+++.++.|..+|. +++.+..+.........+ .. ..+..|..++.+|.|
T Consensus 205 ~~~~~~~~~-~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~---~~-~~~g~l~v~t~~ggl 277 (330)
T 3hxj_A 205 TEKWNFYAG-YWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSP---VI-GNTDTIYFGSYDGHL 277 (330)
T ss_dssp CEEEEECCS-SCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCC---EE-CTTSCEEEECTTCEE
T ss_pred cEEEEEccC-CcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccc---eE-cCCCeEEEecCCCCE
Confidence 554443322 22344455677765 555677888888874 555555444332211111 11 223456678888889
Q ss_pred EEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEEe
Q 021459 262 YVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVWV 309 (312)
Q Consensus 262 ~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~ 309 (312)
..+|. +++....+......+.++...+++..+ .++.+| .+++..
T Consensus 278 ~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G--~~~~~~ 321 (330)
T 3hxj_A 278 YAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNG--KFYALF 321 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTS--CEEEEE
T ss_pred EEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCC--eEEEEe
Confidence 99996 555544444344556667776776544 466444 555543
No 238
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.16 E-value=1.3e-07 Score=77.70 Aligned_cols=236 Identities=11% Similarity=0.106 Sum_probs=144.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeee--------------------ccCCEEEEEEcc-CCCeEEE
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVG--------------------HSEGISDLAWSS-DSHYICS 81 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~ 81 (312)
..-.+++++++++++.++..++.|..|+..++... .+.. ....+..+++.+ +++ |+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 34566889999997888888899999987765432 2211 113578899998 565 444
Q ss_pred EcCCCeEEEEeCCCCc-eeeee-eec-ccccEEEEEEec-CCCEEEEeec-----------------CCcEEEEEcCCCe
Q 021459 82 ASDDRTLRIWDARTPF-DCLKT-LRG-HSDFVFCVNFNP-QSNLIVSGSF-----------------DESIRIWEVKTGK 140 (312)
Q Consensus 82 ~~~d~~v~~wd~~~~~-~~~~~-~~~-~~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~~wd~~~~~ 140 (312)
+...+.+..+|..+.. +.+.. ..+ .......+++.+ +++..++-.. ++.|..+|..+++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5444558888876431 11111 111 112456788999 8887766432 3678889987776
Q ss_pred EEEEeeecCcCeEEEEEccCCCEEEEe-eCCCeEEEEeCCCCc--eeeEcccCCCCcEEEEEECCCCCEEEEEec-----
Q 021459 141 CTRVIRAHSMPVTSVHFNRDGSLIVSG-SHDGTCKIWDAGEGA--CLKTLIDDKDPAVSFAKFSPNGKFILVGTL----- 212 (312)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 212 (312)
....... ......++++|+++.+..+ +..+.|..|++.... ....+.. ... ...++++++|++.++...
T Consensus 177 ~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCccccc
Confidence 4332222 1234678999999865544 566889999986421 1111111 112 556788999987666544
Q ss_pred -----CCeEEEEEcCCCcEEEEEEccCC----ceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 213 -----DSTLKLWNYSAGKFLKIYTGHTN----KKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 213 -----d~~i~v~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
.+.|..+|. .++.+..+..... ....+ .. .++.+.++...++.|..+++..
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~--~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQI--QE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEE--EE--ETTEEEEECSSCSEEEEEEC--
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCccccceEE--EE--eCCEEEEeecCCCceEEEeccc
Confidence 467888886 4676666654321 11222 12 3567777777888999998754
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=3.7e-08 Score=76.86 Aligned_cols=194 Identities=9% Similarity=0.084 Sum_probs=129.2
Q ss_pred ceeceeeecccccc--eEEEEECCCCCEEEEEeCCC--eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEE-cCC
Q 021459 11 PYRHFKTLTAHSRA--VSCVKFSNDGTLLASASLDK--TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSA-SDD 85 (312)
Q Consensus 11 ~~~~~~~~~~h~~~--v~~~~~s~~~~~l~t~~~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 85 (312)
.++..+++ .|... ...|.|+ ++.+..+.+.+| .|+++|+.+++.+.++.... ........++++.|... -.+
T Consensus 30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeC
Confidence 35555555 55443 4789998 677777777766 89999999999888776433 33232233345455444 458
Q ss_pred CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec--CcC---eEEEEEccC
Q 021459 86 RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH--SMP---VTSVHFNRD 160 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~~~---v~~~~~~~~ 160 (312)
+.+.+||..+. +.+.++..... - ..+.++++.|+.+..++.|.++|..+.+....+... ..+ ++.+.|. +
T Consensus 107 ~~v~v~D~~t~-~~~~ti~~~~e-G--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 107 GLGFVWNIRNL-RQVRSFNYDGE-G--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SEEEEEETTTC-CEEEEEECSSC-C--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECccC-cEEEEEECCCC-c--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 89999999874 44555543221 1 223356777777766788999999998877766542 222 4457776 7
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEcccC-----------CCCcEEEEEECCCCCEEEEEec
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTLIDD-----------KDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
|+.++..-.++.|.+.|..+++.+..+... .......++++|+++.|.+.+.
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 877776667889999999999887665321 1234577889998887776654
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=3.1e-07 Score=83.01 Aligned_cols=240 Identities=15% Similarity=0.174 Sum_probs=148.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccC-CEEEEEEcc--CCCeEEEEcC------CCeEEEEeCCCCceeeeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSE-GISDLAWSS--DSHYICSASD------DRTLRIWDARTPFDCLKTLR 104 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~v~~wd~~~~~~~~~~~~ 104 (312)
+..|+.++.|+.+..+|..+++.+.+...... ....+.-.| .+..++++.. ++.|..+|..++...-....
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45677888899999999999998877654211 000011111 1334555432 58899999988644322110
Q ss_pred --cc----------------------------cccEEEEEEecCCCEEEEeecCC-------------------cEEEEE
Q 021459 105 --GH----------------------------SDFVFCVNFNPQSNLIVSGSFDE-------------------SIRIWE 135 (312)
Q Consensus 105 --~~----------------------------~~~v~~~~~~~~~~~l~s~~~dg-------------------~i~~wd 135 (312)
+. ......++++|+.+.++.+..++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 00 00112467888888888887665 389999
Q ss_pred cCCCeEEEEeee--cC-------cCeEEEEEccCCC---EEEEeeCCCeEEEEeCCCCceeeEcccCC-----------C
Q 021459 136 VKTGKCTRVIRA--HS-------MPVTSVHFNRDGS---LIVSGSHDGTCKIWDAGEGACLKTLIDDK-----------D 192 (312)
Q Consensus 136 ~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----------~ 192 (312)
.++|+.+-.++. |. .+.....+..+|+ .++.++.+|.+.++|..+++.+....... .
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 999998776654 21 2222233334665 68899999999999999988763221110 0
Q ss_pred Cc------------------------EEEEEECCCCCEEEEEe------------------------------------c
Q 021459 193 PA------------------------VSFAKFSPNGKFILVGT------------------------------------L 212 (312)
Q Consensus 193 ~~------------------------~~~~~~~~~~~~l~~~~------------------------------------~ 212 (312)
.. -..++++|+...+.+.. .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 00 00135666666555421 2
Q ss_pred CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccC
Q 021459 213 DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG 277 (312)
Q Consensus 213 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 277 (312)
+|.|.-||..+++.+-........... ... ..+.+++.++.||.++.||..+++.+..++.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~---~~~-t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGG---TLS-TAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCC---EEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCc---eeE-eCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 378999999999877655433221110 111 2467888899999999999999988776653
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=6.2e-07 Score=70.75 Aligned_cols=197 Identities=11% Similarity=0.015 Sum_probs=127.5
Q ss_pred EEEEEEccCCCeEEEEcC--CCeEEEEeCCCCceeeeeeec-ccccEEEEEEecCCCEEEEe-ecCCcEEEEEcCCCeEE
Q 021459 67 ISDLAWSSDSHYICSASD--DRTLRIWDARTPFDCLKTLRG-HSDFVFCVNFNPQSNLIVSG-SFDESIRIWEVKTGKCT 142 (312)
Q Consensus 67 v~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~ 142 (312)
...+.|++++.+.++.+. ++.|.++|+.++. .+..+.- .......+++. ++.++.. -.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~-v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGK-VENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCC-EEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCC-EEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 578999998755444443 5799999998863 4444321 11122334444 4455544 45688999999999888
Q ss_pred EEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCC----CcEEEEEECCCCCEEEEEecCCeEEE
Q 021459 143 RVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKD----PAVSFAKFSPNGKFILVGTLDSTLKL 218 (312)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~i~v 218 (312)
..+... .+ ....+++|++.++++..++.+.++|..+.+....+.-... .....+.+. ++...+....++.|.+
T Consensus 100 ~~i~~g-~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 100 KNFTHQ-MK-DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEECC-SS-SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECC-CC-CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 877543 11 1234566887777777788999999998877766543211 123344555 6655555556789999
Q ss_pred EEcCCCcEEEEEEccC-----------CceeEEEEEEEccCCcEEEEeecCCeEEEEECCch
Q 021459 219 WNYSAGKFLKIYTGHT-----------NKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 219 ~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
.|..+++.+..+.... .........+.+...++++++...+.|...++...
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999888776321 00122333455445568888989999999988543
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=7.3e-08 Score=79.14 Aligned_cols=218 Identities=16% Similarity=0.090 Sum_probs=136.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEE
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCV 113 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~ 113 (312)
+..|..++.++.+..++.. ++...........+.++...+++. +..++.++.+..+|.. +. ...........+.++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~-~~~~~~~~~~~~~~~ 182 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT-EKWRFKTNDAITSAA 182 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC-EEEEEECSSCCCSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC-EeEEEecCCCceeee
Confidence 4556677788999999988 776666655555566777777776 5557778999999987 43 233333334455666
Q ss_pred EEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCC
Q 021459 114 NFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDP 193 (312)
Q Consensus 114 ~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (312)
...+++...+.. +.|..+| .+++...........+.++...+++. +..++.++.+..+|. ++.....+... ..
T Consensus 183 ~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~-~~ 255 (330)
T 3hxj_A 183 SIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTG-KR 255 (330)
T ss_dssp EECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECS-SC
T ss_pred EEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCC-CC
Confidence 677777755544 7799999 67766655554455677888888775 455667778888875 44444333222 12
Q ss_pred cEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 194 AVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 194 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
........+++ .|.+++.++.|..+|. +++.+..+......... .....++ .|..++.+|.+++.....
T Consensus 256 ~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~---~~~d~~g-~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 256 IESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIAT---PVIDENG-TIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSC---CEECTTC-CEEEECTTSCEEEEEC--
T ss_pred ccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccc---eEEcCCC-EEEEEcCCCeEEEEeccc
Confidence 12223345555 5667788889999995 66665555433222111 1222344 466688999999887654
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=1.3e-07 Score=73.89 Aligned_cols=188 Identities=13% Similarity=0.110 Sum_probs=125.1
Q ss_pred eceeeeccccc--ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEE--EEEEccCCCeEE-EEcCCCe
Q 021459 13 RHFKTLTAHSR--AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGIS--DLAWSSDSHYIC-SASDDRT 87 (312)
Q Consensus 13 ~~~~~~~~h~~--~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~-~~~~d~~ 87 (312)
+..+++ .|.. -...|.|+ ++.+..+.+.+|.|+++|+.+++.+..+ -. .... .+++ +++.|. ..-.++.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~--~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLAS--DGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEE--CSSCEEEEESSSCE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEE--eCCEEEEEEccCCE
Confidence 333444 4443 34688887 3667777888899999999999887776 22 2332 3444 444343 3446889
Q ss_pred EEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeee--cCc---CeEEEEEccCCC
Q 021459 88 LRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRA--HSM---PVTSVHFNRDGS 162 (312)
Q Consensus 88 v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~--~~~---~v~~~~~~~~~~ 162 (312)
+.+||..+. +.+.++.... .-..++ ++++.|+.+..++.|.++|..+.+.+..+.. +.. .++.+.|. +|+
T Consensus 118 v~V~D~~Tl-~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 118 LFTWSGMPP-QRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEEEETTTT-EEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCcC-cEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 999999874 5555554322 112333 5677777777788999999999888776653 222 34667776 777
Q ss_pred EEEEeeCCCeEEEEeCCCCceeeEcccC------------CCCcEEEEEECCCCCEEEEEe
Q 021459 163 LIVSGSHDGTCKIWDAGEGACLKTLIDD------------KDPAVSFAKFSPNGKFILVGT 211 (312)
Q Consensus 163 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~ 211 (312)
.++..-.++.|.+.|..+++.+..+... .......++++|+++.|.+.+
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7766667889999999999877655321 223567789999776555544
No 244
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.03 E-value=3.1e-08 Score=89.49 Aligned_cols=270 Identities=9% Similarity=0.064 Sum_probs=148.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEeCCCcceE--EEeee-ccCCEEEEEEccCCCeEEEEcC-CCeEEE
Q 021459 27 CVKFSN-DGTLLASASLDK-----------TVIIWSASSLALV--HRFVG-HSEGISDLAWSSDSHYICSASD-DRTLRI 90 (312)
Q Consensus 27 ~~~~s~-~~~~l~t~~~d~-----------~i~vw~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~v~~ 90 (312)
..++.| ++++++.|+.+. .+.+||..+.+.. ..... +.....++++..+++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456667 888888887543 5788998776432 22211 2222335677889999999884 458999
Q ss_pred EeCCCCce-eeeeeecccccEEEEEEecCCCEEEEee-cC-----CcEEEEEcCCCeEEEEe----eecCcCeEEEEEcc
Q 021459 91 WDARTPFD-CLKTLRGHSDFVFCVNFNPQSNLIVSGS-FD-----ESIRIWEVKTGKCTRVI----RAHSMPVTSVHFNR 159 (312)
Q Consensus 91 wd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----g~i~~wd~~~~~~~~~~----~~~~~~v~~~~~~~ 159 (312)
||..+..- .+..+.. ...-.++...++++.++.|+ .+ ..+.+||..+++-...- ......-....+..
T Consensus 270 yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99865321 1111111 11123445567899999988 34 46899999887643320 00000000011223
Q ss_pred CCCEEEEeeCC---------CeEEEEeCCCCceeeEcccCC--------CCcEEEEEEC-CCCCEEEEEecCC-------
Q 021459 160 DGSLIVSGSHD---------GTCKIWDAGEGACLKTLIDDK--------DPAVSFAKFS-PNGKFILVGTLDS------- 214 (312)
Q Consensus 160 ~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~l~~~~~d~------- 214 (312)
++..++.|+.+ ..+..||..+........... ......+.++ .+++.+++|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 44555555444 356788887665332211100 0112223333 4778888887542
Q ss_pred ----eEEEEEcCCCcEEEEE--EccCCceeEEEEEEEccCCcEEEEeecC-----------CeEEEEECCchhe--eecc
Q 021459 215 ----TLKLWNYSAGKFLKIY--TGHTNKKYCITSTFSVTNGKYIVSGSED-----------NCVYVWDLQQKTM--IQKL 275 (312)
Q Consensus 215 ----~i~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~--~~~~ 275 (312)
.|.+||..+....... ........ ......+++++++.|+.+ ..+.+||..+.+- +..+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~--~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTF--HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBS--CEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCccc--CCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 6778887776655432 11111111 112233688999998864 5689999865432 2222
Q ss_pred cCCccceEEEEEcCCCceEEEeee
Q 021459 276 DGHTDSVISVTCHPTENKIASAGL 299 (312)
Q Consensus 276 ~~h~~~v~~l~~~p~~~~l~~~~~ 299 (312)
........+..+.|+++.++.||.
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCccccccHhhcCCCcEEEecCCC
Confidence 222222234456789999998884
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=2.3e-07 Score=83.76 Aligned_cols=192 Identities=14% Similarity=0.133 Sum_probs=121.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCC----------E-EEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEG----------I-SDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~ 102 (312)
+..|+.++.++.|.-+|..+++.+.++...... + ..+++ .+..++.++.|+.|..+|..++...-+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 556777778899999999999988776532210 0 11222 3557788888999999999887543322
Q ss_pred eeccc---ccEE-EEEEecCCCEEEEeec------CCcEEEEEcCCCeEEEEeeecC-c---------------------
Q 021459 103 LRGHS---DFVF-CVNFNPQSNLIVSGSF------DESIRIWEVKTGKCTRVIRAHS-M--------------------- 150 (312)
Q Consensus 103 ~~~~~---~~v~-~~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~-~--------------------- 150 (312)
..... ..+. .... .+..++.+.. +|.|..+|.++|+.+-.+.... .
T Consensus 144 ~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 21110 0111 0111 1345555543 5889999999998876654210 0
Q ss_pred ---------CeEEEEEccCCCEEEEeeCCC-------------------eEEEEeCCCCceeeEcccC-CC-------Cc
Q 021459 151 ---------PVTSVHFNRDGSLIVSGSHDG-------------------TCKIWDAGEGACLKTLIDD-KD-------PA 194 (312)
Q Consensus 151 ---------~v~~~~~~~~~~~l~~~~~d~-------------------~i~iwd~~~~~~~~~~~~~-~~-------~~ 194 (312)
....+++.|+..+++.++.++ .|..+|..+++..-.+... ++ ..
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 012367888778888887765 3899999999876554322 11 12
Q ss_pred EEEEEECCCCC---EEEEEecCCeEEEEEcCCCcEEEE
Q 021459 195 VSFAKFSPNGK---FILVGTLDSTLKLWNYSAGKFLKI 229 (312)
Q Consensus 195 ~~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~ 229 (312)
.....+..+|+ .++.++.+|.++++|..+|+.+..
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 22222334665 688899999999999999998743
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.02 E-value=1e-06 Score=68.21 Aligned_cols=194 Identities=11% Similarity=0.051 Sum_probs=127.2
Q ss_pred ceeceeeecccc--cceEEEEECCCCCEEEEEeCCC--eEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEE-EEcCC
Q 021459 11 PYRHFKTLTAHS--RAVSCVKFSNDGTLLASASLDK--TVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYIC-SASDD 85 (312)
Q Consensus 11 ~~~~~~~~~~h~--~~v~~~~~s~~~~~l~t~~~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d 85 (312)
.++..+++ .|. .-...|.|++ +.+..+.+.+| .|+++|+.+++.+..+..... .......+.++.|. ..-.+
T Consensus 8 ~~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 8 GYRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp CEEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeC
Confidence 45555665 564 4566899987 56666666654 899999999998877654322 22222222344444 34568
Q ss_pred CeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeec--C---cCeEEEEEccC
Q 021459 86 RTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAH--S---MPVTSVHFNRD 160 (312)
Q Consensus 86 ~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~---~~v~~~~~~~~ 160 (312)
+.+.+||..+. +.+.++.... .-..++ +++..|+.+..++.|.++|..+.+.+..++.. . ..++.+.+. +
T Consensus 85 ~~v~v~D~~tl-~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 85 HEGFVYDLATL-TPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp SEEEEEETTTT-EEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECCcC-cEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 89999999874 5555554322 223343 56666666667889999999998877766542 2 234566665 7
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEcccC------------CCCcEEEEEECCCCCEEEEEec
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTLIDD------------KDPAVSFAKFSPNGKFILVGTL 212 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
|+.++..-.+..|.+.|..+++.+..+... .......++++|+++.|.+.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 777766667889999999999887665311 2235677889998776666553
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.01 E-value=2.6e-07 Score=72.15 Aligned_cols=182 Identities=12% Similarity=0.153 Sum_probs=123.0
Q ss_pred cEEEEEEecCCCEEEEeecCC--cEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEE-EeeCCCeEEEEeCCCCceee
Q 021459 109 FVFCVNFNPQSNLIVSGSFDE--SIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIV-SGSHDGTCKIWDAGEGACLK 185 (312)
Q Consensus 109 ~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~ 185 (312)
....+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........+++..+. +.-.++.+.++|..+.+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 45678888 566667777765 89999999999887775433 233322333344444 44468899999999998888
Q ss_pred EcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCc-e-eEE-EEEEEccCCcEEEEeecCCeEE
Q 021459 186 TLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNK-K-YCI-TSTFSVTNGKYIVSGSEDNCVY 262 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~l~~~~~dg~i~ 262 (312)
++.....+ . .++++++.|+.+..++.|.++|..+.+.+..+...... . ..+ ...+ .++++.+..-.++.|.
T Consensus 122 ti~~~~eG-~---glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~--~~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 122 SFNYDGEG-W---GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW--VDGEIFANVWQTNKIV 195 (262)
T ss_dssp EEECSSCC-C---CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE--ETTEEEEEETTSSEEE
T ss_pred EEECCCCc-e---EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE--ECCEEEEEEccCCeEE
Confidence 77543322 1 23356777777766889999999988887776543211 1 111 1122 2677777776788999
Q ss_pred EEECCchheeecccCC------------ccceEEEEEcCCCceEEEee
Q 021459 263 VWDLQQKTMIQKLDGH------------TDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 263 iwd~~~~~~~~~~~~h------------~~~v~~l~~~p~~~~l~~~~ 298 (312)
+.|..+++.+..+.-. .+..+.||++|+++.|..+|
T Consensus 196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 9999998876654321 23569999999988887776
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.99 E-value=2.8e-06 Score=69.11 Aligned_cols=209 Identities=10% Similarity=0.076 Sum_probs=120.3
Q ss_pred CceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC-C-e
Q 021459 10 KPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD-R-T 87 (312)
Q Consensus 10 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-~ 87 (312)
.+.+....+... .....++|+|+++++++-..++.|..++.... ....+ .....+..+++.++++++++.... + .
T Consensus 20 ~~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 20 APAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcce
Confidence 344445555332 55778999999997777767899999987653 32222 234567899999999866554332 2 4
Q ss_pred EEEEeCCCCcee-eeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeE-EEEee---------ecCcCeEEEE
Q 021459 88 LRIWDARTPFDC-LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKC-TRVIR---------AHSMPVTSVH 156 (312)
Q Consensus 88 v~~wd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~-~~~~~---------~~~~~v~~~~ 156 (312)
|..+|..++... +.... .......++..+++..+++-..++.|.++|...++. +.... ..-.....+
T Consensus 97 v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEECTTSCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEEEcCCCCeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 666676554211 11111 112223344445544455544578899999876532 11100 001123445
Q ss_pred EccCCCEEE-EeeCCCeEEEEeCCC-Cce--eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEE
Q 021459 157 FNRDGSLIV-SGSHDGTCKIWDAGE-GAC--LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFL 227 (312)
Q Consensus 157 ~~~~~~~l~-~~~~d~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 227 (312)
+|+++.+. +-...+.|..+++.. +.. ...+.. . .....++++++|+++++....+.|.++|.. ++..
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~ 245 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTT 245 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEE
Confidence 77876554 455677899999864 321 111111 0 112335688999887777777899999864 5543
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=1.4e-07 Score=82.06 Aligned_cols=216 Identities=13% Similarity=0.165 Sum_probs=137.6
Q ss_pred CCCeEEEEcC-CCeEEEEeCCCCceeeeeeec-ccccEEEEEE-e-cCCCEEEEee------------------cCCcEE
Q 021459 75 DSHYICSASD-DRTLRIWDARTPFDCLKTLRG-HSDFVFCVNF-N-PQSNLIVSGS------------------FDESIR 132 (312)
Q Consensus 75 ~~~~l~~~~~-d~~v~~wd~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i~ 132 (312)
||++|+.... +..|.+.|+.+. ++.+.+.- .......+++ . |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7887777654 457999999874 44442221 1133567776 4 8999988884 245789
Q ss_pred EEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCC--------------------------------------eEE
Q 021459 133 IWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDG--------------------------------------TCK 174 (312)
Q Consensus 133 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~i~ 174 (312)
+.|..+.+....+.... ....++++|+|+++++.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999988777766433 346778999999988887553 255
Q ss_pred EEeCCC--Cce-eeEcccCCCCcEEEEEECCCCCEEEEEe-cCCeEEEEEcCCCc------------EEEEEEccCCcee
Q 021459 175 IWDAGE--GAC-LKTLIDDKDPAVSFAKFSPNGKFILVGT-LDSTLKLWNYSAGK------------FLKIYTGHTNKKY 238 (312)
Q Consensus 175 iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~------------~~~~~~~~~~~~~ 238 (312)
+.|.++ +.. +..+.... ....+.++|||+++++++ .+.+|.++|+.+.+ ..........
T Consensus 258 VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g--- 332 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG--- 332 (595)
T ss_dssp EEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC---
T ss_pred EEeCcccCCceeEEEEecCC--CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC---
Confidence 666665 323 22222111 123467999999887764 67899999998542 2222221112
Q ss_pred EEEEEEEccCCcEEEEeecCCeEEEEECCc----------hheeecccCCccce-----EEEEEcCCCceEEEee
Q 021459 239 CITSTFSVTNGKYIVSGSEDNCVYVWDLQQ----------KTMIQKLDGHTDSV-----ISVTCHPTENKIASAG 298 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v-----~~l~~~p~~~~l~~~~ 298 (312)
.....|. ++|...++.--|+.|..||+.. .+.+.++..|-.+- ..++.+|||++|+++.
T Consensus 333 P~h~aF~-~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 333 PLHTAFD-GRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEEEEC-TTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred cceEEEC-CCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 2333444 5676667788899999999876 34555665554321 1224579999888764
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.97 E-value=2.3e-05 Score=72.39 Aligned_cols=276 Identities=9% Similarity=0.153 Sum_probs=163.2
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeee-------ccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVG-------HSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
...|.++...+++.+.+....+| +.+|+..+.+....... ....|.++...++|.+.+. ..+ -|.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAG-LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEE-eCC-hhheEcCC
Confidence 45688888888777655443344 78888776544322111 1356899999888876654 444 58888876
Q ss_pred CCceeeeeee--------cccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee------ecCcCeEEEEEccC
Q 021459 95 TPFDCLKTLR--------GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR------AHSMPVTSVHFNRD 160 (312)
Q Consensus 95 ~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~------~~~~~v~~~~~~~~ 160 (312)
+.. ...+. -....|.++...+++++ ..|+.++-|..|+..+++...... .....|.++...++
T Consensus 291 ~~~--~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 291 TDS--FASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TTE--EEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT
T ss_pred CCe--EEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC
Confidence 542 11111 12356889988888764 456666778889876554222111 02345889988888
Q ss_pred CCEEEEeeCCCeEEEEeCCCCceeeEcccC-------CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc
Q 021459 161 GSLIVSGSHDGTCKIWDAGEGACLKTLIDD-------KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH 233 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 233 (312)
|.+. .|+.++-+..||..++....-.... ....+..+..++++..|.+|+.++-|..||..+++........
T Consensus 368 g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~ 446 (795)
T 4a2l_A 368 KNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN 446 (795)
T ss_dssp SCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT
T ss_pred CCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC
Confidence 8754 5777777899998766543221111 1234667777788875667787788999998877643322110
Q ss_pred C-CceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeeccc------CCccceEEEEEcCCCceEEEeeecCCeeEE
Q 021459 234 T-NKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLD------GHTDSVISVTCHPTENKIASAGLDGDRTVR 306 (312)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~ 306 (312)
. .....+.......++.+.+. +.+| +..||..+++...... -....|.++...+++...+... +| |.
T Consensus 447 ~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G---l~ 520 (795)
T 4a2l_A 447 SQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG---LS 520 (795)
T ss_dssp SCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC---EE
T ss_pred CCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc---eE
Confidence 0 01112233333345665543 4455 8889987654322111 1235788998888886655433 33 55
Q ss_pred EEee
Q 021459 307 VWVQ 310 (312)
Q Consensus 307 iw~~ 310 (312)
.|+.
T Consensus 521 ~~~~ 524 (795)
T 4a2l_A 521 VFKQ 524 (795)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 5543
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.95 E-value=2.2e-07 Score=72.52 Aligned_cols=181 Identities=10% Similarity=0.056 Sum_probs=123.0
Q ss_pred cEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeE--EEEEccCCCEEEEeeCCCeEEEEeCCCCceeeE
Q 021459 109 FVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVT--SVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKT 186 (312)
Q Consensus 109 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (312)
....+.|+. +.++.+.+.+|.|+++|+++++.+..+ ... ... .+++.. +++.++.-.++.+.++|..+.+.+.+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 456777774 566777788889999999999887766 332 233 345443 34445555788999999999998887
Q ss_pred cccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCce--eEEEEEEEccCCcEEEEeecCCeEEEE
Q 021459 187 LIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKK--YCITSTFSVTNGKYIVSGSEDNCVYVW 264 (312)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~i~iw 264 (312)
+...... . .+.++++.|+.+..++.|.++|..+.+.+..+....... ..+.-.-. .++++.+..-.++.|.+.
T Consensus 132 i~~~~eG-w---GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 132 TRYSGEG-W---GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC-ANGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EECSSCC-C---CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTCSEEEEE
T ss_pred EeCCCce-e---EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-eCCEEEEEECCCCeEEEE
Confidence 7543322 1 233567888888778999999999988877765432211 11111111 267777766678899999
Q ss_pred ECCchheeecccC-------------CccceEEEEEcCCCceEEEee
Q 021459 265 DLQQKTMIQKLDG-------------HTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 265 d~~~~~~~~~~~~-------------h~~~v~~l~~~p~~~~l~~~~ 298 (312)
|..+++.+..+.- -.+-.+.||++|+++.|...|
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9998877655432 123578999999887777665
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=1.1e-06 Score=67.90 Aligned_cols=184 Identities=9% Similarity=0.025 Sum_probs=122.3
Q ss_pred ccEEEEEEecCCCEEEEeecC--CcEEEEEcCCCeEEEEeeecCcC-eEEEEEccCCCEEEEeeCCCeEEEEeCCCCcee
Q 021459 108 DFVFCVNFNPQSNLIVSGSFD--ESIRIWEVKTGKCTRVIRAHSMP-VTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACL 184 (312)
Q Consensus 108 ~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (312)
.....+.|++ +.++.+.+.. +.|+.+|+.+++.+......... --.+++. ++++....-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 4566788886 4555666654 48999999999988776543322 1233443 2344455557889999999999888
Q ss_pred eEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCc--eeEEEEEEEccCCcEEEEeecCCeEE
Q 021459 185 KTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNK--KYCITSTFSVTNGKYIVSGSEDNCVY 262 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~ 262 (312)
.++.....+ . .+.++++.|.++..++.|.++|..+.+.+..+...... ...+.-.- ..++++.+..-.+..|.
T Consensus 99 ~ti~~~~~G-w---glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 99 ARFRYPGEG-W---ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIA 173 (243)
T ss_dssp EEEECSSCC-C---EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEE
T ss_pred EEEeCCCCc-e---EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEE
Confidence 877544322 2 23356777777777899999999998887776543211 11111111 13677777666788999
Q ss_pred EEECCchheeecccC-------------CccceEEEEEcCCCceEEEee
Q 021459 263 VWDLQQKTMIQKLDG-------------HTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 263 iwd~~~~~~~~~~~~-------------h~~~v~~l~~~p~~~~l~~~~ 298 (312)
+.|..+++.+..+.- -.+-.+.+|++|+++.|...|
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999998877655431 123578999999888777665
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.95 E-value=2.3e-05 Score=72.42 Aligned_cols=265 Identities=12% Similarity=0.152 Sum_probs=157.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEe-eeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeee
Q 021459 25 VSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF-VGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTL 103 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~ 103 (312)
|.++...+++.+.+ +..++-+..|+..+.+..... ......|.++...+++.+.+. ..++-+..||..+.. ...+
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~--~~~~ 250 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKE--IKNY 250 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTE--EEEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCe--EEEe
Confidence 88888888887655 455445788887765543221 123456888888888876654 444348889876532 1111
Q ss_pred ec--------ccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeee-------cCcCeEEEEEccCCCEEEEee
Q 021459 104 RG--------HSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRA-------HSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 104 ~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~ 168 (312)
.. ....|.++...+++++.+ |+.+ -|.+||..+++....... ....|.++...++|.+. .|+
T Consensus 251 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt 327 (795)
T 4a2l_A 251 LHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGT 327 (795)
T ss_dssp CCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEE
T ss_pred ecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEE
Confidence 11 135688998888877554 4445 488999887764432211 23468999999888754 566
Q ss_pred CCCeEEEEeCCCCceeeEccc-----CCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc-----CCcee
Q 021459 169 HDGTCKIWDAGEGACLKTLID-----DKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH-----TNKKY 238 (312)
Q Consensus 169 ~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~~~ 238 (312)
.++-+..++..++....-... -....+..+..+++|. |-+|+.++-|..||..++......... .-...
T Consensus 328 ~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred CCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 777788888765432211110 0123467777788776 445777778999998776544322111 00011
Q ss_pred EEEEEEEccCCcEEEEeecCCeEEEEECCchheeeccc----CCccceEEEEEcCCCceEEEe
Q 021459 239 CITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLD----GHTDSVISVTCHPTENKIASA 297 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~p~~~~l~~~ 297 (312)
.+.......++..|-.|+.++-|..+|..+++...... .....|.++...+++...+..
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 23333333566645567776779999987654322111 134578999888877655433
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.95 E-value=4.7e-06 Score=66.29 Aligned_cols=203 Identities=6% Similarity=-0.032 Sum_probs=124.3
Q ss_pred cceEEEEECCCCCEEEE-EeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEEeCCCCceee
Q 021459 23 RAVSCVKFSNDGTLLAS-ASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t-~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~~~~ 100 (312)
.....++++|+++.|.. -..++.|.+++.........+.........+++++++..|+ +-...+.|.++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~- 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR- 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-
Confidence 45678999997665554 44568999999876544322222224678999999765555 4455678999988643211
Q ss_pred eeeecccccEEEEEEecCCCEEEEeec---CCcEEEEEcCCCeEEEEee-ecCcCeEEEEEccCCCEE-EEeeCCCeEEE
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGSF---DESIRIWEVKTGKCTRVIR-AHSMPVTSVHFNRDGSLI-VSGSHDGTCKI 175 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i 175 (312)
.........-..++++|++..++.+.. .+.|..+++.... ...+. ........++++|++..| ++-...+.|..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 111111234578899997666555544 3678888876432 22222 222346789999976655 45556688999
Q ss_pred EeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEE
Q 021459 176 WDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~ 231 (312)
+|....... .+...... ...++.. +..|.++ ...+.|..+|..+++.+..+.
T Consensus 194 ~~~~g~~~~-~~~~~~~~-P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 194 LNPAQPGRR-KVLEGLQY-PFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EETTEEEEE-EEEECCCS-EEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCCceE-EEecCCCC-ceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 998754322 22222222 2333443 4455544 456899999998888777664
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.95 E-value=1.4e-06 Score=77.07 Aligned_cols=257 Identities=12% Similarity=0.075 Sum_probs=152.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeecc--C--CEEE-EEEccCCCeEEEEcC------CCeEEEEeCCCCceeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHS--E--GISD-LAWSSDSHYICSASD------DRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------d~~v~~wd~~~~~~~~~~ 102 (312)
+..++.++.|+.+..+|..+++.+.+..... . .+.+ ... .+..+++++. ++.|..+|..++...-+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 5567778889999999999999887654321 0 1211 111 1335555544 789999999886543221
Q ss_pred eecccc------------------------------------cE-EEEEEecCCCEEEEeecC----------------C
Q 021459 103 LRGHSD------------------------------------FV-FCVNFNPQSNLIVSGSFD----------------E 129 (312)
Q Consensus 103 ~~~~~~------------------------------------~v-~~~~~~~~~~~l~s~~~d----------------g 129 (312)
...... .+ ..+++.++...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 111000 00 135567766676665532 3
Q ss_pred cEEEEEcCCCeEEEEeeecC----------cCeEEEEEccCCC---EEEEeeCCCeEEEEeCCCCceeeEcccCC-----
Q 021459 130 SIRIWEVKTGKCTRVIRAHS----------MPVTSVHFNRDGS---LIVSGSHDGTCKIWDAGEGACLKTLIDDK----- 191 (312)
Q Consensus 130 ~i~~wd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----- 191 (312)
.|..+|.++++.+-.++... .++. +...++|+ .++.++.+|.+.++|..+++.+-......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 58899999998876665321 2221 22234674 57788899999999999988765432111
Q ss_pred -------CCcE--------------------------EEEEECCCCCEEEEEe---------------------------
Q 021459 192 -------DPAV--------------------------SFAKFSPNGKFILVGT--------------------------- 211 (312)
Q Consensus 192 -------~~~~--------------------------~~~~~~~~~~~l~~~~--------------------------- 211 (312)
...+ ..++++|+...+.+..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 0000 1235677767666653
Q ss_pred ----------cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCcc-
Q 021459 212 ----------LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTD- 280 (312)
Q Consensus 212 ----------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~- 280 (312)
.++.|..||..+++.+..+........ . ... ..+..++.++.||.|+.+|..+++.+-+++....
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~-~--~~~-t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG-G--TLY-TKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS-B--CEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc-e--eEE-ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 347899999999987766543221110 0 011 2355677799999999999999988766653221
Q ss_pred ceEEEEEcCCCceEEEe
Q 021459 281 SVISVTCHPTENKIASA 297 (312)
Q Consensus 281 ~v~~l~~~p~~~~l~~~ 297 (312)
...-+.+.+++..++..
T Consensus 508 ~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 508 IGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred EeeeEEEEECCEEEEEE
Confidence 11223355677655543
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.91 E-value=4.1e-07 Score=79.17 Aligned_cols=233 Identities=14% Similarity=0.087 Sum_probs=146.6
Q ss_pred CCCCEEEEEeC-CCeEEEEeCCCcceEEEeeec-cCCEEEEEE-c-cCCCeEEEEc------------------CCCeEE
Q 021459 32 NDGTLLASASL-DKTVIIWSASSLALVHRFVGH-SEGISDLAW-S-SDSHYICSAS------------------DDRTLR 89 (312)
Q Consensus 32 ~~~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~d~~v~ 89 (312)
+||+++..... +..|.+-|+.+.+....+.-. ......+++ + |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 48888776654 567999999999876644322 345788888 5 8999998884 235788
Q ss_pred EEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCC--------------------------------------cE
Q 021459 90 IWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE--------------------------------------SI 131 (312)
Q Consensus 90 ~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--------------------------------------~i 131 (312)
+.|..+. +...++.--. .-.-++++|+++++++.+.+. .|
T Consensus 179 vID~~t~-~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKW-EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTT-EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCC-eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 8888864 4444433111 223466889999888877543 36
Q ss_pred EEEEcCC--CeE-EEEeeecCcCeEEEEEccCCCEEEEee-CCCeEEEEeCCCCc------------eeeEcccCCCCcE
Q 021459 132 RIWEVKT--GKC-TRVIRAHSMPVTSVHFNRDGSLIVSGS-HDGTCKIWDAGEGA------------CLKTLIDDKDPAV 195 (312)
Q Consensus 132 ~~wd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------------~~~~~~~~~~~~~ 195 (312)
.+.|.++ ++. +..+... ....++.++|||+++++++ .+.+|.++|+.+.+ ...++. .+...
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG~gP 333 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LGLGP 333 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CCSCE
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CCCCc
Confidence 6667666 333 3333322 2346789999999776554 67899999998642 122221 22335
Q ss_pred EEEEECCCCCEEEEEecCCeEEEEEcCC----------CcEEEEEEccCCceeEEEE--EEEccCCcEEEEeec---CCe
Q 021459 196 SFAKFSPNGKFILVGTLDSTLKLWNYSA----------GKFLKIYTGHTNKKYCITS--TFSVTNGKYIVSGSE---DNC 260 (312)
Q Consensus 196 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~---dg~ 260 (312)
..++|+|+|...++.-.|++|.+||+.. ...+..+..+......... ....++|++|++... |..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 5678999995445567799999999876 4455555554432111100 011367888887643 432
Q ss_pred E----------EEEECCch
Q 021459 261 V----------YVWDLQQK 269 (312)
Q Consensus 261 i----------~iwd~~~~ 269 (312)
+ .++|+..+
T Consensus 414 ~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp CCCCSSCCEEEEEEECSSS
T ss_pred ccCCCCCCCcceEEEcCCC
Confidence 1 77888543
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.89 E-value=2.9e-06 Score=75.29 Aligned_cols=252 Identities=16% Similarity=0.155 Sum_probs=148.3
Q ss_pred EEEEeCCCeEEEEeCCCcceEEEeeecc----CCEEE-EEEccCCCeEEEEc------CCCeEEEEeCCCCceeeeeeec
Q 021459 37 LASASLDKTVIIWSASSLALVHRFVGHS----EGISD-LAWSSDSHYICSAS------DDRTLRIWDARTPFDCLKTLRG 105 (312)
Q Consensus 37 l~t~~~d~~i~vw~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~d~~v~~wd~~~~~~~~~~~~~ 105 (312)
|+.++.|+.+..+|..+++.+.+..... ..+.+ ... .++ .+++++ .++.|+.+|..++...-+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7888889999999999999887654321 01211 111 134 455554 3789999999887543221111
Q ss_pred ccc------------------------------------cE-EEEEEecCCCEEEEeecC----------------CcEE
Q 021459 106 HSD------------------------------------FV-FCVNFNPQSNLIVSGSFD----------------ESIR 132 (312)
Q Consensus 106 ~~~------------------------------------~v-~~~~~~~~~~~l~s~~~d----------------g~i~ 132 (312)
... .+ ..+++.++...++.+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 100 01 134566777777776654 3789
Q ss_pred EEEcCCCeEEEEeeecCc----------CeEEEEEc-cCC---CEEEEeeCCCeEEEEeCCCCceeeEcccCC-------
Q 021459 133 IWEVKTGKCTRVIRAHSM----------PVTSVHFN-RDG---SLIVSGSHDGTCKIWDAGEGACLKTLIDDK------- 191 (312)
Q Consensus 133 ~wd~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------- 191 (312)
-+|.++|+..-.++.... ++. +... .+| ..++.++.+|.+.++|..+++.+-......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 999999998766654221 121 2222 467 467778999999999999988765432110
Q ss_pred -----CCcE--------------------------EEEEECCCCCEEEEEe-----------------------------
Q 021459 192 -----DPAV--------------------------SFAKFSPNGKFILVGT----------------------------- 211 (312)
Q Consensus 192 -----~~~~--------------------------~~~~~~~~~~~l~~~~----------------------------- 211 (312)
...+ ..++++|+..++.+..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 0000 1234556555544321
Q ss_pred ----------cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCcc-
Q 021459 212 ----------LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTD- 280 (312)
Q Consensus 212 ----------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~- 280 (312)
..|.|.-||+.+++.+-........... .. ...+.+++.++.||.++.||.++++.+-+++-...
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g---~~-~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~ 516 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGG---TM-ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA 516 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSB---CE-EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCc---ce-EecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCc
Confidence 3467888999888876554322111000 01 12356777799999999999999988766542221
Q ss_pred ceEEEEEcCCCceEE
Q 021459 281 SVISVTCHPTENKIA 295 (312)
Q Consensus 281 ~v~~l~~~p~~~~l~ 295 (312)
...-+.+..+|++++
T Consensus 517 ~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 517 IGYPMTYTHKGTQYV 531 (599)
T ss_dssp CSCCEEEEETTEEEE
T ss_pred EeccEEEEeCCEEEE
Confidence 112234556776544
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.86 E-value=1.9e-05 Score=64.14 Aligned_cols=225 Identities=12% Similarity=0.047 Sum_probs=131.7
Q ss_pred CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCC--cEEEEEcCCCeEE
Q 021459 65 EGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDE--SIRIWEVKTGKCT 142 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~ 142 (312)
.....++|+++++++++-..++.|..||..... ..... .......+++.++++++++..... .|..+|..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~--~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE--EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce--EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 346789999999877776678899999876532 22221 234577899999998666554332 4667787777654
Q ss_pred EEeeec-CcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce-ee-E-------cccCCCCcEEEEEECCCCCEEEEE-e
Q 021459 143 RVIRAH-SMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC-LK-T-------LIDDKDPAVSFAKFSPNGKFILVG-T 211 (312)
Q Consensus 143 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~-~-------~~~~~~~~~~~~~~~~~~~~l~~~-~ 211 (312)
...... ......++..+++..+++-..++.|..+|..++.. +. . ...........+ +++++.|.++ .
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 332211 12234455555555555555688899999765421 11 0 000111122223 7788766555 5
Q ss_pred cCCeEEEEEcCC-CcE--EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe--eecccCCccceEEEE
Q 021459 212 LDSTLKLWNYSA-GKF--LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM--IQKLDGHTDSVISVT 286 (312)
Q Consensus 212 ~d~~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~ 286 (312)
..+.|..||+.. ++. ...+.... ....+ ...++|.+.++....+.|.++|.. ++. +..+........+++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~-~P~gi---~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQT-NIDDF---AFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESC-CCSSE---EEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccC-CCCCe---EECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 578999999864 321 11221110 11112 123568888887778899999975 433 223333335689999
Q ss_pred Ec---CCCceEEEeee
Q 021459 287 CH---PTENKIASAGL 299 (312)
Q Consensus 287 ~~---p~~~~l~~~~~ 299 (312)
|. |+++.|..++.
T Consensus 262 ~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ECCSTTTTTEEEEEEC
T ss_pred EecccCCCCEEEEECC
Confidence 98 88777666554
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.86 E-value=8.2e-06 Score=72.36 Aligned_cols=258 Identities=14% Similarity=0.126 Sum_probs=151.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccC----CEE-EEEEcc---CCC-eEEEEc------CCCeEEEEeCCCCce
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSE----GIS-DLAWSS---DSH-YICSAS------DDRTLRIWDARTPFD 98 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~~------~d~~v~~wd~~~~~~ 98 (312)
+..|+.++.|+.+..+|..+++.+.+...... .+. +..... +++ .+++++ .++.|..+|..++..
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788899999999999998876653221 111 111111 233 565654 378899999887643
Q ss_pred eeeeeeccc----------------------------------------c-cEEEEEEecCCCEEEEeec----------
Q 021459 99 CLKTLRGHS----------------------------------------D-FVFCVNFNPQSNLIVSGSF---------- 127 (312)
Q Consensus 99 ~~~~~~~~~----------------------------------------~-~v~~~~~~~~~~~l~s~~~---------- 127 (312)
.-.. .... . .-..++++|+...++.+..
T Consensus 197 ~W~~-~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWMR-PFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEE-ESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred Eeec-CCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 3211 1000 0 0013456777777776552
Q ss_pred ----------C----CcEEEEEcCCCeEEEEeee--cC--------cCeEEEEEc-cCCC---EEEEeeCCCeEEEEeCC
Q 021459 128 ----------D----ESIRIWEVKTGKCTRVIRA--HS--------MPVTSVHFN-RDGS---LIVSGSHDGTCKIWDAG 179 (312)
Q Consensus 128 ----------d----g~i~~wd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~ 179 (312)
| +.|.-+|.++|+..-.++. |. .++. +... .+|+ .++.++.+|.+.++|..
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 5799999999998776653 21 1221 1221 4664 78889999999999999
Q ss_pred CCceeeEcccCC------------CC--------------------cE------------EEEEECCCCCEEEEEe----
Q 021459 180 EGACLKTLIDDK------------DP--------------------AV------------SFAKFSPNGKFILVGT---- 211 (312)
Q Consensus 180 ~~~~~~~~~~~~------------~~--------------------~~------------~~~~~~~~~~~l~~~~---- 211 (312)
+++.+-...... .. .. ..++++|+...+.+..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 888764432211 00 00 0134566555444432
Q ss_pred -----------------------------cCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEE
Q 021459 212 -----------------------------LDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVY 262 (312)
Q Consensus 212 -----------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 262 (312)
.+|.|.-||+.+++.+-........... ... ..+.+++.|+.||.++
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g---~~~-tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAG---VLA-TAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSC---CEE-ETTTEEEEECTTSEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCccc---ceE-eCCCEEEEECCCCcEE
Confidence 2578999999999876554432211100 011 2356777899999999
Q ss_pred EEECCchheeecccCCccc-eEEEEEcCCCceEEEe
Q 021459 263 VWDLQQKTMIQKLDGHTDS-VISVTCHPTENKIASA 297 (312)
Q Consensus 263 iwd~~~~~~~~~~~~h~~~-v~~l~~~p~~~~l~~~ 297 (312)
.||.++++.+-+++..... ..-+.+..+++++++.
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 9999999888766543221 1124566777655443
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.83 E-value=2.9e-05 Score=64.31 Aligned_cols=244 Identities=6% Similarity=-0.067 Sum_probs=141.4
Q ss_pred cccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEE-cCCCeEEEEeCCCCcee
Q 021459 21 HSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSA-SDDRTLRIWDARTPFDC 99 (312)
Q Consensus 21 h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~~~~ 99 (312)
+.+..+|.+..++. +|+.+. ...|+..+.........+. ....+..++|++.+..|+.+ ...+.|..+++.....
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~- 107 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV- 107 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-
Confidence 34455676666644 444333 3457777776654433332 33457899999866655544 4567888888865421
Q ss_pred eeeeecccccEEEEEEecCCC-EEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCE-EEEeeCC-CeEEEE
Q 021459 100 LKTLRGHSDFVFCVNFNPQSN-LIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSL-IVSGSHD-GTCKIW 176 (312)
Q Consensus 100 ~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d-~~i~iw 176 (312)
.............+++++.+. ++++-...+.|.+.++........+...-.....++++|.+.. +.+-... +.|..+
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 111111122345678887554 4455555678999998754433333223345688999985554 4444444 778888
Q ss_pred eCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEe
Q 021459 177 DAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
++... ....+..........++++|++..|..+ ...+.|..+|+........+.........+.. ..+.+.++-
T Consensus 188 ~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav----~~~~ly~td 262 (349)
T 3v64_C 188 SMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSLYWTD 262 (349)
T ss_dssp ETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE----ETTEEEEEE
T ss_pred eCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE----ECCEEEEec
Confidence 87543 2333332233345667899876666555 45678999998654433333333333333332 245677777
Q ss_pred ecCCeEEEEECCchheee
Q 021459 256 SEDNCVYVWDLQQKTMIQ 273 (312)
Q Consensus 256 ~~dg~i~iwd~~~~~~~~ 273 (312)
...+.|..++..+++...
T Consensus 263 ~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 263 WHTKSINSANKFTGKNQE 280 (349)
T ss_dssp TTTTEEEEEETTTCCSCE
T ss_pred CCCCeEEEEEccCCCccE
Confidence 778888888855444333
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=3e-05 Score=63.39 Aligned_cols=234 Identities=12% Similarity=0.092 Sum_probs=133.1
Q ss_pred CEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeee------------------cccccEEEEEEec-CCCEEEEee
Q 021459 66 GISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLR------------------GHSDFVFCVNFNP-QSNLIVSGS 126 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~------------------~~~~~v~~~~~~~-~~~~l~s~~ 126 (312)
...+++|.++++++.++..++.|..|+..+......... ........+++.+ +++ |+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 445788999998788888889999998765321111100 0112467888997 554 55554
Q ss_pred cCCcEEEEEcCCCeEEEEeee----cCcCeEEEEEcc-CCCEEEEeeC-----------------CCeEEEEeCCCCcee
Q 021459 127 FDESIRIWEVKTGKCTRVIRA----HSMPVTSVHFNR-DGSLIVSGSH-----------------DGTCKIWDAGEGACL 184 (312)
Q Consensus 127 ~dg~i~~wd~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~~~~~~ 184 (312)
..+.|..+|..+++....... .......+++.+ +|++.++-.. ++.+..+|..+++..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 455588888775542221111 112467899999 9987776432 367888887665532
Q ss_pred eEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCc--EEEEEEccCCceeEEEEEEEccCCcEEEEeec----
Q 021459 185 KTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGK--FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE---- 257 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 257 (312)
... .. ......++++|+++.|.++ +..+.|.+|++.... ....+..... ...+ ...++|.+.++...
T Consensus 179 ~~~-~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi---~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 179 LLL-KE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNI---KRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEE-EE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEE---EECTTSCEEEEEEEETTS
T ss_pred Eec-cC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCe---EECCCCCEEEEecCcccc
Confidence 211 11 1112346799999866655 566899999987521 1222221112 2222 23356777666544
Q ss_pred ------CCeEEEEECCchheeecccCC----ccceEEEEEcCCCceEEEeeecCCeeEEEEee
Q 021459 258 ------DNCVYVWDLQQKTMIQKLDGH----TDSVISVTCHPTENKIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 258 ------dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw~~ 310 (312)
.+.|..+|.. ++.+..+... ...+..+++ .++..++ ++.. ...|..+++
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v-~~~~-~~~i~~~~~ 311 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYI-GTLF-HGSVGILVY 311 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEE-ECSS-CSEEEEEEC
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEE-eecC-CCceEEEec
Confidence 5678888864 4444444322 234566666 3454444 4332 346666654
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.80 E-value=2.2e-05 Score=61.49 Aligned_cols=203 Identities=10% Similarity=0.145 Sum_probs=129.7
Q ss_pred eeecccccceEEEEECCCCCEEE-EEeCCCeEEEEeCCCcceEEEeee-ccCCEEEEEEccCCCeEEEEcCCCeEEEEeC
Q 021459 16 KTLTAHSRAVSCVKFSNDGTLLA-SASLDKTVIIWSASSLALVHRFVG-HSEGISDLAWSSDSHYICSASDDRTLRIWDA 93 (312)
Q Consensus 16 ~~~~~h~~~v~~~~~s~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~ 93 (312)
+-+.+-.+.++.++|+|+++.|+ ....++.|...|.. ++.+.++.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45667777899999999877555 46778888888987 777666532 1245678899988887777656778888887
Q ss_pred CCCce--eeeeee------cccccEEEEEEecCCCEEEEeecCCcEEEEEcC---CCeEEEEee-------ecCcCeEEE
Q 021459 94 RTPFD--CLKTLR------GHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVK---TGKCTRVIR-------AHSMPVTSV 155 (312)
Q Consensus 94 ~~~~~--~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~---~~~~~~~~~-------~~~~~v~~~ 155 (312)
..... .+.... ........++|+|+++.|+++.......+|... .......+. .+-..+..+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 54332 112221 123345789999999888777766555555543 111122221 122346789
Q ss_pred EEccCC-CEEEEeeCCCeEEEEeCCCCceeeEcccC--------CCCcEEEEEECCCCCEEEEEecCCeEEEEEc
Q 021459 156 HFNRDG-SLIVSGSHDGTCKIWDAGEGACLKTLIDD--------KDPAVSFAKFSPNGKFILVGTLDSTLKLWNY 221 (312)
Q Consensus 156 ~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 221 (312)
+++|.. ++++....+..+..+|.. ++....+.-. .-+...-++++++|+..++ +.-+.++.|..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 999954 455566667778888865 4443333221 1245677889999985554 66667777653
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.77 E-value=2e-06 Score=77.71 Aligned_cols=239 Identities=10% Similarity=0.112 Sum_probs=134.8
Q ss_pred EEEEcc-CCCeEEEEcCCC-----------eEEEEeCCCCce-eeeee-ecccccEEEEEEecCCCEEEEeec-CCcEEE
Q 021459 69 DLAWSS-DSHYICSASDDR-----------TLRIWDARTPFD-CLKTL-RGHSDFVFCVNFNPQSNLIVSGSF-DESIRI 133 (312)
Q Consensus 69 ~~~~~~-~~~~l~~~~~d~-----------~v~~wd~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~~ 133 (312)
..++.+ ++++++.|+.+. .+.+||..+..- .+..+ ..+.....++++..++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 788888876542 578899876421 11122 122233345677788999999985 457999
Q ss_pred EEcCCCeEEEEeeecCc-CeEEEEEccCCCEEEEee-CC-----CeEEEEeCCCCceeeEc------ccCCCCcEEEEEE
Q 021459 134 WEVKTGKCTRVIRAHSM-PVTSVHFNRDGSLIVSGS-HD-----GTCKIWDAGEGACLKTL------IDDKDPAVSFAKF 200 (312)
Q Consensus 134 wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~ 200 (312)
||..+++-...-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+++..... ....... ..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ---GLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT---GGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc---cee
Confidence 99988764432211111 123455667899999988 34 46899999876644320 0000000 112
Q ss_pred CCCCCEEEEEecC---------CeEEEEEcCCCcEEEEEEccCC-------ceeEEEEEEEccCCcEEEEeecCC-----
Q 021459 201 SPNGKFILVGTLD---------STLKLWNYSAGKFLKIYTGHTN-------KKYCITSTFSVTNGKYIVSGSEDN----- 259 (312)
Q Consensus 201 ~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~dg----- 259 (312)
..++..++.++.+ ..+..||..+............ ........+...++++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 2344555555444 4567888877665433222111 011122223335788888888643
Q ss_pred ------eEEEEECCchheeecc--cCC-ccceEEEEEcCCCceEEEeeecCC---------eeEEEEee
Q 021459 260 ------CVYVWDLQQKTMIQKL--DGH-TDSVISVTCHPTENKIASAGLDGD---------RTVRVWVQ 310 (312)
Q Consensus 260 ------~i~iwd~~~~~~~~~~--~~h-~~~v~~l~~~p~~~~l~~~~~dgd---------~~v~iw~~ 310 (312)
.|.+||..+.+-.... .-. ...-.+.+..|+++.++.+|.+.. ..+.+|++
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence 6888887654332211 111 111234456789999999986521 46778775
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.77 E-value=1e-06 Score=80.73 Aligned_cols=194 Identities=13% Similarity=0.132 Sum_probs=109.2
Q ss_pred ceEEEEEC-CCCCEEEEEe-CC----CeEEEEeCCCc-ceEEE-eeeccCCEEEEEEccCCCeEEEEcCC-----CeEEE
Q 021459 24 AVSCVKFS-NDGTLLASAS-LD----KTVIIWSASSL-ALVHR-FVGHSEGISDLAWSSDSHYICSASDD-----RTLRI 90 (312)
Q Consensus 24 ~v~~~~~s-~~~~~l~t~~-~d----~~i~vw~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~~ 90 (312)
.+...+|| |||++||-+. .+ ..|+++++.++ +.+.. +.. ....++|+||++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 9999887543 22 35999999988 63221 111 13468899999877766654 25778
Q ss_pred EeCCCCcee-eeeee-cccccEEEEEEecCCCEEEEeec---CCcEEEEEcCCC--eE--EEEeeecCcCeEEEEEccCC
Q 021459 91 WDARTPFDC-LKTLR-GHSDFVFCVNFNPQSNLIVSGSF---DESIRIWEVKTG--KC--TRVIRAHSMPVTSVHFNRDG 161 (312)
Q Consensus 91 wd~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~---dg~i~~wd~~~~--~~--~~~~~~~~~~v~~~~~~~~~ 161 (312)
+++.++... ...+. ........+.|+||+++|+..+. ...|.++|+.++ +. .............+.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 888764311 11111 22345667899999998776553 345888898765 22 22222333445555554444
Q ss_pred CEEEEeeCC----CeEEEEeCCCCceeeE-cccCCCCcEEEEEECCCCCEE-EEEecCCe--EEEEEc
Q 021459 162 SLIVSGSHD----GTCKIWDAGEGACLKT-LIDDKDPAVSFAKFSPNGKFI-LVGTLDST--LKLWNY 221 (312)
Q Consensus 162 ~~l~~~~~d----~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~--i~v~d~ 221 (312)
.+++....+ ..|..+|+.+...... +... ........+++.++.| ++...++. |.++|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 444444433 3566677654211122 2222 2222222333344544 45566665 555664
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.76 E-value=3.3e-05 Score=64.97 Aligned_cols=244 Identities=6% Similarity=-0.070 Sum_probs=139.3
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEE-cCCCeEEEEeCCCCceeeee
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSA-SDDRTLRIWDARTPFDCLKT 102 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~~~~~~~ 102 (312)
.-+|.+..++ .+|+.+. ...|+..+........... ....+..++|++.+..|+.. ...+.|..+++..... ...
T Consensus 78 ~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~ 153 (386)
T 3v65_B 78 RRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEV 153 (386)
T ss_dssp SSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEE
T ss_pred CCeECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEE
Confidence 3445554553 3444333 3568888877655433333 33457899999866555544 4567888898875421 111
Q ss_pred eecccccEEEEEEecCCCE-EEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe-eCC-CeEEEEeCC
Q 021459 103 LRGHSDFVFCVNFNPQSNL-IVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG-SHD-GTCKIWDAG 179 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~iwd~~ 179 (312)
..........+++++.+.. +++-...+.|.+.++........+...-.....++++|.+..|... ... +.|..+++.
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 1111123345777875544 4555556788888876543333332233456889999866554443 344 678888875
Q ss_pred CCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC
Q 021459 180 EGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED 258 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 258 (312)
... ...+..........++++|++..|..+ +..+.|..+|+........+.........+.. ..+.++.+-...
T Consensus 234 G~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav----~~~~ly~td~~~ 308 (386)
T 3v65_B 234 GSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSLYWTDWHT 308 (386)
T ss_dssp SCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE----ETTEEEEEETTT
T ss_pred CCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE----ECCEEEEeeCCC
Confidence 432 222322223335667899876666555 45678999998654433333323233333332 345677777788
Q ss_pred CeEEEEECCchheeeccc
Q 021459 259 NCVYVWDLQQKTMIQKLD 276 (312)
Q Consensus 259 g~i~iwd~~~~~~~~~~~ 276 (312)
+.|..++..+++....+.
T Consensus 309 ~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 309 KSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TEEEEEETTTCCSCEEEE
T ss_pred CeEEEEECCCCcceEEEc
Confidence 999999865554444443
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=2.8e-05 Score=66.32 Aligned_cols=154 Identities=10% Similarity=0.101 Sum_probs=95.4
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC-C----eEEEEeCCCCc
Q 021459 24 AVSCVKFSN-DGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD-R----TLRIWDARTPF 97 (312)
Q Consensus 24 ~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~v~~wd~~~~~ 97 (312)
.-..++++| ++..|..+...+.|+.++........ +.........++|++++++|+.+... + .+...+.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 346789998 45556665555889999988765433 33344567899999999966666542 1 33334432221
Q ss_pred eeeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEeeec-CcCeEEEEEccCCCE-EEEeeCCCeEE
Q 021459 98 DCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVIRAH-SMPVTSVHFNRDGSL-IVSGSHDGTCK 174 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~-l~~~~~d~~i~ 174 (312)
.....+.. ......++++| ++.++++-..++.|..++...+......... ......++++|++++ +++-...+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 11111111 12235677899 6666666666788999998876643322221 233578999999994 45555677888
Q ss_pred EEeCC
Q 021459 175 IWDAG 179 (312)
Q Consensus 175 iwd~~ 179 (312)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 87754
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.75 E-value=1.1e-05 Score=73.98 Aligned_cols=194 Identities=9% Similarity=0.082 Sum_probs=108.6
Q ss_pred CEEEEEEc-cCCCeEEEEcC-C----CeEEEEeCCCC-ceeeeeeecccccEEEEEEecCCCEEEEeecC-----CcEEE
Q 021459 66 GISDLAWS-SDSHYICSASD-D----RTLRIWDARTP-FDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD-----ESIRI 133 (312)
Q Consensus 66 ~v~~~~~~-~~~~~l~~~~~-d----~~v~~wd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~~ 133 (312)
.+...+|+ |||++|+.+.. + ..|+++|+.++ ......+. .....+.|+||++.|+....+ ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998875533 2 25999999876 42111121 113357899999887776654 25788
Q ss_pred EEcCCCeE--EEEeee-cCcCeEEEEEccCCCEEEEeeC---CCeEEEEeCCCCc-ee--eEcccCCCCcEEEEEECCCC
Q 021459 134 WEVKTGKC--TRVIRA-HSMPVTSVHFNRDGSLIVSGSH---DGTCKIWDAGEGA-CL--KTLIDDKDPAVSFAKFSPNG 204 (312)
Q Consensus 134 wd~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 204 (312)
+++.+++. ...+.. .......+.|+|||++|+..+. ...+.++|+.++. .. ..+............|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 88877642 223322 2233567889999998876553 3467888887652 12 333332222222233333 5
Q ss_pred CEEEEEe-cC----CeEEEEEcCCC-cEEE-EEEccCCceeEEEEEEEccCCcEEEEeecCCeEEE--EEC
Q 021459 205 KFILVGT-LD----STLKLWNYSAG-KFLK-IYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYV--WDL 266 (312)
Q Consensus 205 ~~l~~~~-~d----~~i~v~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i--wd~ 266 (312)
+.|+..+ .+ ..|..+|+.++ +... .+. +.... .+.. +...++.++++...+|..++ +++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~~~~~-~l~~-~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-HSEDV-FMES-IAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC-CCSSE-EEEE-EEECSSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC-CCCCc-EEEE-EEEECCEEEEEEEeCCEEEEEEEec
Confidence 5554443 33 36777777642 2222 222 22221 1221 22234556677788886554 564
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.73 E-value=9.8e-06 Score=71.77 Aligned_cols=194 Identities=14% Similarity=0.094 Sum_probs=115.9
Q ss_pred CCEEEEEeC-CCeEEEEeC-CCcceEEEeeeccC-C---------E-EEEEEccCCCeEEEEcCCCeEEEEeCCCCceee
Q 021459 34 GTLLASASL-DKTVIIWSA-SSLALVHRFVGHSE-G---------I-SDLAWSSDSHYICSASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 34 ~~~l~t~~~-d~~i~vw~~-~~~~~~~~~~~~~~-~---------v-~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~ 100 (312)
+..++.++. ++.|.-+|. .+++.+.+...... . + ..++. .+..++.++.|+.+..+|..++...-
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666666 889999999 89988876643211 0 0 11222 35677888889999999998875433
Q ss_pred ee-eecccc--cEE-EEEEecCCCEEEEeec------CCcEEEEEcCCCeEEEEeeecCcC-------------------
Q 021459 101 KT-LRGHSD--FVF-CVNFNPQSNLIVSGSF------DESIRIWEVKTGKCTRVIRAHSMP------------------- 151 (312)
Q Consensus 101 ~~-~~~~~~--~v~-~~~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~------------------- 151 (312)
+. ...+.. .+. ..... + ..++.++. ++.|..+|.++|+.+-.+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 22 111110 111 11111 3 45555554 789999999999877655432110
Q ss_pred -------------------eEEEEEccCCCEEEEeeCC----------------CeEEEEeCCCCceeeEcccCC-----
Q 021459 152 -------------------VTSVHFNRDGSLIVSGSHD----------------GTCKIWDAGEGACLKTLIDDK----- 191 (312)
Q Consensus 152 -------------------v~~~~~~~~~~~l~~~~~d----------------~~i~iwd~~~~~~~~~~~~~~----- 191 (312)
...+++.++...+..++.+ +.|..+|..+++.+-.+....
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0124566665566655532 358899999988765543211
Q ss_pred ---CCcEEEEEECCCCC---EEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 192 ---DPAVSFAKFSPNGK---FILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 192 ---~~~~~~~~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
..........++|+ .++.++.+|.++++|..+++.+....
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 01111122234674 56778889999999999998876554
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=2.2e-05 Score=67.06 Aligned_cols=238 Identities=11% Similarity=0.148 Sum_probs=133.7
Q ss_pred CEEEEEEcc-CCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecC-C----cEEEEEcCCC
Q 021459 66 GISDLAWSS-DSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD-E----SIRIWEVKTG 139 (312)
Q Consensus 66 ~v~~~~~~~-~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g----~i~~wd~~~~ 139 (312)
....|+++| ++..|+++...+.|+.+|+.... +..+.........++++++++.|+.+... + .+...+.. +
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-S 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C
Confidence 346789998 45556666554788889987632 22332334456789999999966665542 2 23334432 2
Q ss_pred eEE--EEeeecCcCeEEEEEcc-CCCEEEEeeCCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCe
Q 021459 140 KCT--RVIRAHSMPVTSVHFNR-DGSLIVSGSHDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDST 215 (312)
Q Consensus 140 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~ 215 (312)
... ..+.. ......++++| ++.++++-..++.|..++...+................++++|+|++|.++ ...+.
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 211 22222 22356788999 777777777788999999876654221111112234567899999955444 56789
Q ss_pred EEEEEcCCC--cE--EEEEEccC---C----------ceeEEEEEEEc--------cCCcEEEEeecCCeEEEEECCchh
Q 021459 216 LKLWNYSAG--KF--LKIYTGHT---N----------KKYCITSTFSV--------TNGKYIVSGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 216 i~v~d~~~~--~~--~~~~~~~~---~----------~~~~~~~~~~~--------~~~~~l~~~~~dg~i~iwd~~~~~ 270 (312)
|..++.... .. +..+.+.. . ........+.. .++.+.++-..+++|+.++. ++.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc
Confidence 999887532 21 12222210 0 00011011211 23556666667788888874 332
Q ss_pred eeecccCC------------------ccceEEEEEcCC-CceEEEeeecCCeeEEEEeec
Q 021459 271 MIQKLDGH------------------TDSVISVTCHPT-ENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 271 ~~~~~~~h------------------~~~v~~l~~~p~-~~~l~~~~~dgd~~v~iw~~~ 311 (312)
. ..+.+. -.....|++.|+ +..+++-. +..+||...++
T Consensus 373 v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~--~n~rIr~i~~e 429 (430)
T 3tc9_A 373 V-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR--ENRRIRKIGYE 429 (430)
T ss_dssp E-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG--GGTEEEEEEEC
T ss_pred E-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC--CCCeEEEEccC
Confidence 2 121110 114789999995 54444433 34578877665
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.71 E-value=6.5e-05 Score=61.30 Aligned_cols=229 Identities=7% Similarity=-0.029 Sum_probs=132.1
Q ss_pred EEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEE-cCCCeEEEEeCCCC---ceeeeeeecccccEEE
Q 021459 37 LASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSA-SDDRTLRIWDARTP---FDCLKTLRGHSDFVFC 112 (312)
Q Consensus 37 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~---~~~~~~~~~~~~~v~~ 112 (312)
|+.+.. ..|+..++.+.+....+. ....+..++|++++..|+.+ ...+.|..+++... ......+.........
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 434333 467888887765544332 34567899999876555544 45688999987651 1111112212123457
Q ss_pred EEEecCCC-EEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee-CC-CeEEEEeCCCCceeeEccc
Q 021459 113 VNFNPQSN-LIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS-HD-GTCKIWDAGEGACLKTLID 189 (312)
Q Consensus 113 ~~~~~~~~-~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~ 189 (312)
+++++.+. ++++-...+.|.+.++........+.........++++|.+..++... .. +.|...++.. .....+..
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEE
Confidence 88886554 445555678899999875443333332334568999998655544443 33 6788887753 32333322
Q ss_pred CCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEcc--CCceeEEEEEEEccCCcEEEEeecCCeEEEEEC
Q 021459 190 DKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGH--TNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 266 (312)
........+++++++..|..+ +..+.|..+|+............ ......+. . ..+.++++-...+.|..++.
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~gia--v--~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--V--FEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE--E--ETTEEEEEETTTTEEEEEET
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEE--E--ECCEEEEEECCCCeEEEEeC
Confidence 223345677899877766655 45679999998754332222321 12222332 2 24667777778889999987
Q ss_pred Cchhee
Q 021459 267 QQKTMI 272 (312)
Q Consensus 267 ~~~~~~ 272 (312)
.+++..
T Consensus 237 ~~g~~~ 242 (316)
T 1ijq_A 237 LTGSDV 242 (316)
T ss_dssp TTCCCC
T ss_pred CCCcce
Confidence 655443
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.70 E-value=5.9e-05 Score=64.38 Aligned_cols=200 Identities=9% Similarity=0.033 Sum_probs=113.8
Q ss_pred ceEEEEECCC--CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCC---C-eEEEEeCCCCc
Q 021459 24 AVSCVKFSND--GTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDD---R-TLRIWDARTPF 97 (312)
Q Consensus 24 ~v~~~~~s~~--~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-~v~~wd~~~~~ 97 (312)
.-..++++|+ +..|..+...+.|+.++..++.... +.........++++++++++++.... . .+...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568899985 4445444444889999987766543 33344568899999999944443211 1 23333322211
Q ss_pred eeeeeeecccccEEEEEEec-CCCEEEEeecCCcEEEEEcCCCeEEEEe-eecC-cCeEEEEEccCCCE-EEEeeCCCeE
Q 021459 98 DCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDESIRIWEVKTGKCTRVI-RAHS-MPVTSVHFNRDGSL-IVSGSHDGTC 173 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~-~~v~~~~~~~~~~~-l~~~~~d~~i 173 (312)
.....+. ....-..++++| +++++++-..++.|+.+|..++.....+ .... ..-..++++|+++. +++-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1001111 112234577888 6666666666788999998877652222 2111 12346999999984 4555566789
Q ss_pred EEEeCC--CCce--eeEcccC--------------CCCcEEEEEE---------CCCCCEEEEEecCCeEEEEEcCCCcE
Q 021459 174 KIWDAG--EGAC--LKTLIDD--------------KDPAVSFAKF---------SPNGKFILVGTLDSTLKLWNYSAGKF 226 (312)
Q Consensus 174 ~iwd~~--~~~~--~~~~~~~--------------~~~~~~~~~~---------~~~~~~l~~~~~d~~i~v~d~~~~~~ 226 (312)
..++.. ++.. ...+... .-.....+++ ++++.++++-...+.|+.++. ++..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 887754 2221 1111111 0112344667 677777776667788999884 4543
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.69 E-value=7.5e-05 Score=60.95 Aligned_cols=224 Identities=5% Similarity=-0.060 Sum_probs=128.9
Q ss_pred CCeEEEEeCCCcc--eEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCC
Q 021459 43 DKTVIIWSASSLA--LVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQS 119 (312)
Q Consensus 43 d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
...|+..++.... ....+. ....+..++|++.+..|+ +-...+.|..+++...................+++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 3578888887653 222222 223456899998655554 445567888888865421111111111234567888744
Q ss_pred -CEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee--CCCeEEEEeCCCCceeeEcccCCCCcEE
Q 021459 120 -NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS--HDGTCKIWDAGEGACLKTLIDDKDPAVS 196 (312)
Q Consensus 120 -~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (312)
+++++-...+.|.++++..................+++.|.+..+.... ..+.|...++... ....+....-....
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPN 169 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCcc
Confidence 4455555667899999875433222223334568899998655555444 3577888887532 22223222233456
Q ss_pred EEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhee
Q 021459 197 FAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI 272 (312)
Q Consensus 197 ~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (312)
.+++++++..|..+ +..+.|..+|+..................+. . ..+.++.+-...+.|..++..+++..
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gla--v--~~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT--L--FEDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEE--E--ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEE--E--eCCEEEEEecCCCeEEEEECCCCCce
Confidence 67899876666655 4568899999865433333332223333333 2 23566677778889999988655443
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.64 E-value=6.4e-05 Score=66.74 Aligned_cols=196 Identities=12% Similarity=0.070 Sum_probs=119.8
Q ss_pred CCEEEEEeC-CCeEEEEeC-CCcceEEEeeeccCC-----------EEEEEEccCCCe----EEEEcCCCeEEEEeCCCC
Q 021459 34 GTLLASASL-DKTVIIWSA-SSLALVHRFVGHSEG-----------ISDLAWSSDSHY----ICSASDDRTLRIWDARTP 96 (312)
Q Consensus 34 ~~~l~t~~~-d~~i~vw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~d~~v~~wd~~~~ 96 (312)
+..|+.++. ++.|.-+|. .+++.+.+....... ...+++.|.+.. |+.++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666676 888999999 899988776532210 123455444444 788888999999999887
Q ss_pred ceeeeeee-ccc--ccEE-EEEEecCCCEEEEee------cCCcEEEEEcCCCeEEEEeeecCcC---------------
Q 021459 97 FDCLKTLR-GHS--DFVF-CVNFNPQSNLIVSGS------FDESIRIWEVKTGKCTRVIRAHSMP--------------- 151 (312)
Q Consensus 97 ~~~~~~~~-~~~--~~v~-~~~~~~~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~--------------- 151 (312)
..+-+.-. .+. ..+. ..... + ..++.++ .+|.|+-+|.++|+.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 55433211 110 0111 11111 3 3555554 3789999999999877555422110
Q ss_pred ----------------------e-EEEEEccCCCEEEEeeCC----------------CeEEEEeCCCCceeeEcccCCC
Q 021459 152 ----------------------V-TSVHFNRDGSLIVSGSHD----------------GTCKIWDAGEGACLKTLIDDKD 192 (312)
Q Consensus 152 ----------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~iwd~~~~~~~~~~~~~~~ 192 (312)
+ ..+++.+...+++.++.+ +.|..+|..+++..-.+.....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 134566666677776654 3788899999887654432211
Q ss_pred --------CcEEEEEEC-CCC---CEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 193 --------PAVSFAKFS-PNG---KFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 193 --------~~~~~~~~~-~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
......... .+| +.++.++.+|.++++|..+++.+....
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 011112222 567 567778899999999999999876543
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.57 E-value=0.00022 Score=60.86 Aligned_cols=239 Identities=12% Similarity=0.151 Sum_probs=133.5
Q ss_pred CEEEEEEccC--CCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecC---C-cEEEEEcCCC
Q 021459 66 GISDLAWSSD--SHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD---E-SIRIWEVKTG 139 (312)
Q Consensus 66 ~v~~~~~~~~--~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---g-~i~~wd~~~~ 139 (312)
....++|+|+ +..|..+...+.|+.+|..+.. +..+.........++++++++++++.... . .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~--v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY--VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE--EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE--EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3568899984 4455555444789999986542 33333334457789999999944443321 1 1333333222
Q ss_pred eE-EEEeeecCcCeEEEEEcc-CCCEEEEeeCCCeEEEEeCCCCceeeEccc-CCCCcEEEEEECCCCCEEEEE-ecCCe
Q 021459 140 KC-TRVIRAHSMPVTSVHFNR-DGSLIVSGSHDGTCKIWDAGEGACLKTLID-DKDPAVSFAKFSPNGKFILVG-TLDST 215 (312)
Q Consensus 140 ~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-~~d~~ 215 (312)
.. ...+. .......++++| ++.++++-..++.|..+|..++.....+.. ........++++|+++.|.++ ...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 01111 223346788999 777777766788999999876655222221 112223357899999955554 55689
Q ss_pred EEEEEcCC--CcE--EEEEEccCC-------------ceeEEEEEEE--------ccCCcEEEEeecCCeEEEEECCchh
Q 021459 216 LKLWNYSA--GKF--LKIYTGHTN-------------KKYCITSTFS--------VTNGKYIVSGSEDNCVYVWDLQQKT 270 (312)
Q Consensus 216 i~v~d~~~--~~~--~~~~~~~~~-------------~~~~~~~~~~--------~~~~~~l~~~~~dg~i~iwd~~~~~ 270 (312)
|+.+++.. +.. ...+.+... ........+. ..++.+.++-..+++|+.++. ++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 99988752 321 112222100 0011222221 345667777778888998875 332
Q ss_pred eeecccCC------------------ccceEEEEEc-CCCceEEEeeecCCeeEEEEeec
Q 021459 271 MIQKLDGH------------------TDSVISVTCH-PTENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 271 ~~~~~~~h------------------~~~v~~l~~~-p~~~~l~~~~~dgd~~v~iw~~~ 311 (312)
. ..+.+. -.....|++. +++..+++-. +..+||...++
T Consensus 376 v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~--~n~rIr~i~~e 432 (433)
T 4hw6_A 376 V-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC--DNHRVRKIAPE 432 (433)
T ss_dssp E-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG--GGTEEEEEEEC
T ss_pred E-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC--CCCEEEEEecC
Confidence 2 222111 1236789999 5565555443 34678877765
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.53 E-value=0.00019 Score=63.62 Aligned_cols=196 Identities=12% Similarity=0.069 Sum_probs=115.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCE---------EEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEGI---------SDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLR 104 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~ 104 (312)
+..++.++.++.+.-+|..+++.+.++....... ..+++ .+..++.++.|+.|..+|..++...-+...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3445555554458889999999887765432210 11222 355677788899999999988754332211
Q ss_pred -cccc--cE-EEEEEec---CCC-EEEEee------cCCcEEEEEcCCCeEEEEeeecCcC-------------------
Q 021459 105 -GHSD--FV-FCVNFNP---QSN-LIVSGS------FDESIRIWEVKTGKCTRVIRAHSMP------------------- 151 (312)
Q Consensus 105 -~~~~--~v-~~~~~~~---~~~-~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~------------------- 151 (312)
.+.. .+ ....... +++ .++.++ .++.|.-+|.++|+.+-........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 1110 01 0111111 122 566654 3788999999999876543221000
Q ss_pred ----------------------eEEEEEccCCCEEEEeeC--------------------C----CeEEEEeCCCCceee
Q 021459 152 ----------------------VTSVHFNRDGSLIVSGSH--------------------D----GTCKIWDAGEGACLK 185 (312)
Q Consensus 152 ----------------------v~~~~~~~~~~~l~~~~~--------------------d----~~i~iwd~~~~~~~~ 185 (312)
-..++++|+..+++.+.. | +.|..+|..+++..-
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 012456666666665552 2 579999999988765
Q ss_pred EcccC-CC-------CcEEEEEEC-CCCC---EEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 186 TLIDD-KD-------PAVSFAKFS-PNGK---FILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 186 ~~~~~-~~-------~~~~~~~~~-~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
.+... ++ ......... .+|+ .++.++.+|.++++|..+++.+..+.
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 54321 11 111112222 4674 77888999999999999999876554
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.0006 Score=62.85 Aligned_cols=264 Identities=16% Similarity=0.148 Sum_probs=150.4
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee-------eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV-------GHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
..|.++...+++.+.+.. .+ -+.+|+..+.+...... .....|.++...++|.+.+ |...+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCC
Confidence 568888888888766543 44 58888876654322111 1235688998888886554 55545678888765
Q ss_pred Ccee-eee-------e-----ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee---------ecCcCeE
Q 021459 96 PFDC-LKT-------L-----RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR---------AHSMPVT 153 (312)
Q Consensus 96 ~~~~-~~~-------~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~---------~~~~~v~ 153 (312)
.... ... . .-....|.++...++++ +..|+.++-|..++..++....... .....|.
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence 3211 000 0 01235688888888775 4556666678888877654322110 0234588
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeCCCCceeeEcc---cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 154 SVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLI---DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 154 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
++...++|.+. .|+.++-+..+|..++.... +. .-....+..+..++++.+. +|+.++.+..+|..+++... +
T Consensus 367 ~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~-~ 442 (781)
T 3v9f_A 367 SVCDDGQGKLW-IGTDGGGINVFENGKRVAIY-NKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQI-I 442 (781)
T ss_dssp EEEECTTSCEE-EEEBSSCEEEEETTEEEEEC-C-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEE-C
T ss_pred EEEEcCCCCEE-EEeCCCcEEEEECCCCeEEE-ccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEE-e
Confidence 88888877654 56666668889876543221 11 1122446666677777644 46766778899877665432 2
Q ss_pred EccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccC-----CccceEEEEEcCCCceEEE
Q 021459 231 TGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDG-----HTDSVISVTCHPTENKIAS 296 (312)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~p~~~~l~~ 296 (312)
.........+.......++.+. .|+. +-|..+|..+++....... ....|.++...+++...+.
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred ccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 2110111123333333445544 4455 4588898876543221111 1357889988888765543
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.51 E-value=0.00033 Score=59.17 Aligned_cols=237 Identities=8% Similarity=-0.032 Sum_probs=139.1
Q ss_pred CEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEE-cCCCeEEEEeCCCCc---eeeeeeecccccE
Q 021459 35 TLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSA-SDDRTLRIWDARTPF---DCLKTLRGHSDFV 110 (312)
Q Consensus 35 ~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~~---~~~~~~~~~~~~v 110 (312)
.+|+.+.. ..|+..++........+ .....+..++|++.+..|+.. ...+.|+.+++.... .............
T Consensus 84 ~~ll~~~~-~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 84 AYLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp CEEEEEET-TEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEecc-ceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 34544443 67888888766543333 344667899999876655554 456788888876421 1111222223345
Q ss_pred EEEEEecC-CCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee--CCCeEEEEeCCCCceeeEc
Q 021459 111 FCVNFNPQ-SNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS--HDGTCKIWDAGEGACLKTL 187 (312)
Q Consensus 111 ~~~~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~ 187 (312)
..+++++. ++++++-...+.|.+.++........+.........++++|.+..|+... ..+.|...++.... ...+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEE
Confidence 67888874 44555555678899999876544433333334578999998655554443 23678888875433 2233
Q ss_pred ccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEEC
Q 021459 188 IDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 266 (312)
....-.....+++++++..|..+ ...+.|..+|+....................... ..+.++.+-...+.|..+|.
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEES
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEc
Confidence 22223445668899877777666 4567899999865544333333221122222222 34567777778888999987
Q ss_pred Cchheeeccc
Q 021459 267 QQKTMIQKLD 276 (312)
Q Consensus 267 ~~~~~~~~~~ 276 (312)
.+++....+.
T Consensus 319 ~~G~~~~~i~ 328 (400)
T 3p5b_L 319 LTGSDVNLLA 328 (400)
T ss_dssp SSCCCCEEEE
T ss_pred CCCCceEEEe
Confidence 6665544443
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.50 E-value=0.00032 Score=58.08 Aligned_cols=204 Identities=9% Similarity=-0.003 Sum_probs=116.7
Q ss_pred ceEEEEECCCCCEEEEE-eCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCC-eEEEEcCCCeEEEEeCCCCceeee
Q 021459 24 AVSCVKFSNDGTLLASA-SLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSH-YICSASDDRTLRIWDARTPFDCLK 101 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~-~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~~~~~ 101 (312)
....++|++.+..|..+ ...+.|..++.........+.........+++.+.+. +.++-...+.|.+.++..... ..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~ 152 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KV 152 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EE
Confidence 45788999766655544 4567888888876554332222223456899987554 445555667899998865322 11
Q ss_pred eeecccccEEEEEEecCCCEEEEee-cC-CcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEE-EEeeCCCeEEEEeC
Q 021459 102 TLRGHSDFVFCVNFNPQSNLIVSGS-FD-ESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLI-VSGSHDGTCKIWDA 178 (312)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~-~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~ 178 (312)
........-..++++|.+..++... .. +.|...++............-.....++++|++..| ++-...+.|..+|+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 2222234457889998666555444 34 678888876433222222222346789999865554 44455678999987
Q ss_pred CCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 179 GEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
.... ...+..........+++ ..+..+++-...+.|..+|..+++....+
T Consensus 233 dG~~-~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 233 DGSH-RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TSCS-CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCc-eEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 6432 22222222222333444 23444444455667777775555544433
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=0.00075 Score=62.22 Aligned_cols=266 Identities=9% Similarity=0.051 Sum_probs=147.8
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee-------eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCC
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV-------GHSEGISDLAWSSDSHYICSASDDRTLRIWDART 95 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~ 95 (312)
..|.++...+++.+.+ +..++-+..++..+.+...-.. -....|.++...+++.+.+.. .+ -+.+||..+
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-SK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-TT-EEEEEETTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-CC-cHheECCCC
Confidence 4577777777776555 4455457788877654322110 013468889888888766544 44 688898765
Q ss_pred Cceee-eee-----ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee--------------ecCcCeEEE
Q 021459 96 PFDCL-KTL-----RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR--------------AHSMPVTSV 155 (312)
Q Consensus 96 ~~~~~-~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~--------------~~~~~v~~~ 155 (312)
..... ... ......|.++...+++. +..|+..+-|.++|..+++...... .....|.++
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i 318 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYI 318 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEE
T ss_pred CcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEE
Confidence 32111 000 01234688888877765 4455664568889987665322111 123468899
Q ss_pred EEccCCCEEEEeeCCCeEEEEeCCCCceeeEcc--------cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEE
Q 021459 156 HFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLI--------DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFL 227 (312)
Q Consensus 156 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 227 (312)
...++|.+ -.|+.++-|..++..+.....-.. .-....+..+..+++|. |.+|+.++-|..||..++...
T Consensus 319 ~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~ 396 (781)
T 3v9f_A 319 FQDSFNNI-WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAI 396 (781)
T ss_dssp EECSSCCE-EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEE
T ss_pred EEeCCCCE-EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEE
Confidence 88888864 456666778888876554322110 00123466777777776 445666677888987654322
Q ss_pred EEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecc--cCCccceEEEEEcCCCceEE
Q 021459 228 KIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKL--DGHTDSVISVTCHPTENKIA 295 (312)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~p~~~~l~ 295 (312)
............+.......++.+.+ |+.++-|..+|..+++..... ......|.++...+++...+
T Consensus 397 ~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 397 YNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp CC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred EccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence 11100000111233333334555444 666666888887655432211 11345788888887776544
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.49 E-value=0.00022 Score=55.87 Aligned_cols=192 Identities=14% Similarity=0.160 Sum_probs=120.8
Q ss_pred eecccccEEEEEEecCCCEEEE-eecCCcEEEEEcCCCeEEEEeeec-CcCeEEEEEccCCCEEEEeeCCCeEEEEeCCC
Q 021459 103 LRGHSDFVFCVNFNPQSNLIVS-GSFDESIRIWEVKTGKCTRVIRAH-SMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGE 180 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s-~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (312)
+.+-.+.+..++|+|+++.|++ ...++.|...|+. ++.++.+... ....-.+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 4444567899999998776554 6677889999988 7777666432 24567888988888777766778888887765
Q ss_pred Cce---eeEcc-----cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCC---CcEEEEEEc-----cCCceeEEEEEE
Q 021459 181 GAC---LKTLI-----DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSA---GKFLKIYTG-----HTNKKYCITSTF 244 (312)
Q Consensus 181 ~~~---~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~~-----~~~~~~~~~~~~ 244 (312)
... ..... .........++++|.++.|.++.......+|.+.. ...+..... .......-...+
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 332 11111 11233467889999998887776665555655531 112222211 000001123345
Q ss_pred EccCCcEEEEeecCCeEEEEECCchheeec--cc-CC------ccceEEEEEcCCCceEEE
Q 021459 245 SVTNGKYIVSGSEDNCVYVWDLQQKTMIQK--LD-GH------TDSVISVTCHPTENKIAS 296 (312)
Q Consensus 245 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~-~h------~~~v~~l~~~p~~~~l~~ 296 (312)
.+..+++++...++..+..+|.... .+.. +. +. -..--.|++.|+|+.+++
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred cCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 6677888888889999999997644 3322 22 21 124579999999986655
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.46 E-value=0.00035 Score=56.98 Aligned_cols=194 Identities=10% Similarity=0.238 Sum_probs=117.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccC----CC---eEEEEc-C--CCeEEEEeCCCCceeeeee
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSD----SH---YICSAS-D--DRTLRIWDARTPFDCLKTL 103 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--d~~v~~wd~~~~~~~~~~~ 103 (312)
..++++..+.+-+.+||+ .++.+..+.. +.++.+..-|. |+ ++++.. . ++.|.+|++......+..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345666677789999999 7777777643 45666655552 22 233333 3 5789999764222223333
Q ss_pred ec------cc-ccEEEEEE--ecCCC--EEEEeecCCcEEEEEcC---C----CeEEEEeeecCcCeEEEEEccCCCEEE
Q 021459 104 RG------HS-DFVFCVNF--NPQSN--LIVSGSFDESIRIWEVK---T----GKCTRVIRAHSMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 104 ~~------~~-~~v~~~~~--~~~~~--~l~s~~~dg~i~~wd~~---~----~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
.. .. ..+..+++ +|... +++....+|.+..|++. . .+.++.+.. ...+..+...+....|+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEE
Confidence 11 11 23334555 66443 57777888999999883 2 244455543 34677888888888999
Q ss_pred EeeCCCeEEEEeCC-----CCceeeEcc-cCCCCcEEEEEE--CCCCC-EEEEEe-cCCeEEEEEcC-CCcEEEEEE
Q 021459 166 SGSHDGTCKIWDAG-----EGACLKTLI-DDKDPAVSFAKF--SPNGK-FILVGT-LDSTLKLWNYS-AGKFLKIYT 231 (312)
Q Consensus 166 ~~~~d~~i~iwd~~-----~~~~~~~~~-~~~~~~~~~~~~--~~~~~-~l~~~~-~d~~i~v~d~~-~~~~~~~~~ 231 (312)
.+-++..|..++.. +++.+..+- ......+..+.+ .++++ +|++++ .++.+.+||.. +.+.+..+.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 99998777777744 233343331 111223555555 55555 666665 56799999986 556666553
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.46 E-value=0.00044 Score=58.08 Aligned_cols=206 Identities=10% Similarity=0.021 Sum_probs=118.5
Q ss_pred cceEEEEECCCCCEEE-EEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeE-EEEcCCCeEEEEeCCCCceee
Q 021459 23 RAVSCVKFSNDGTLLA-SASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYI-CSASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~wd~~~~~~~~ 100 (312)
.....++|++.+..|. +-...+.|..++.........+.........+++.+.+..| ++-...+.|.+.++..... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-E
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-E
Confidence 3467789997665554 44456889889887655433232222345678898755444 4555567888888764322 1
Q ss_pred eeeecccccEEEEEEecCCCEEEEeec-C-CcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEE-EEeeCCCeEEEEe
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGSF-D-ESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLI-VSGSHDGTCKIWD 177 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd 177 (312)
.........-..++++|.+..|+.... . +.|..+++............-.....++++|++..| ++-+..+.|..+|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 122222244578889987766555543 3 678888876443322222222346789999765544 4555667899998
Q ss_pred CCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 178 AGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
+.... ...+..........+++ ..+..+++-...+.|..+|..+++.+..+.
T Consensus 275 ~dG~~-~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSH-RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCS-CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCe-eEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 76432 22222222223334445 234445555566778888765665544443
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.44 E-value=0.00096 Score=61.17 Aligned_cols=235 Identities=8% Similarity=-0.034 Sum_probs=133.9
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEEeCCCCc---eeeeeeecccccEE
Q 021459 36 LLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIWDARTPF---DCLKTLRGHSDFVF 111 (312)
Q Consensus 36 ~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~~~---~~~~~~~~~~~~v~ 111 (312)
+|+.+. ...|+..++........+ .....+..|+|.+.+..|+ +-...+.|+.+++.... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444333 356777777655443333 2345678899998655544 44456778888876421 11112221223445
Q ss_pred EEEEecCCCEE-EEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee-CC-CeEEEEeCCCCceeeEcc
Q 021459 112 CVNFNPQSNLI-VSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS-HD-GTCKIWDAGEGACLKTLI 188 (312)
Q Consensus 112 ~~~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~ 188 (312)
.+++.+.++.| ++-...+.|.+.++........+.........|+++|.+..|+... .. +.|...++.... ...+.
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEE
Confidence 68888776544 4555668899999875543333333334578999999755554443 22 678888876433 33333
Q ss_pred cCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECC
Q 021459 189 DDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (312)
.........+++++.+..|..+ ...+.|..+++.......+..........+.+.. ..+.++++-...+.|...|..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCC
Confidence 3333445667888776666665 4557899999865554444443222222233232 234566677777888888866
Q ss_pred chheeecc
Q 021459 268 QKTMIQKL 275 (312)
Q Consensus 268 ~~~~~~~~ 275 (312)
+++.+..+
T Consensus 632 tG~~~~~l 639 (791)
T 3m0c_C 632 TGSDVNLL 639 (791)
T ss_dssp TCCCCEEE
T ss_pred CCcceEEe
Confidence 55444333
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=0.00059 Score=55.18 Aligned_cols=156 Identities=5% Similarity=0.057 Sum_probs=102.1
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEeCCCcceEEEeeec-----c--CCEEEEEE---ccCCCeEEEEc----------
Q 021459 25 VSCVKFSNDGTLLASAS-LDKTVIIWSASSLALVHRFVGH-----S--EGISDLAW---SSDSHYICSAS---------- 83 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~-~d~~i~vw~~~~~~~~~~~~~~-----~--~~v~~~~~---~~~~~~l~~~~---------- 83 (312)
-.+++|++....+..++ ..+.|..|+...+......... . ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 34689988555555555 7899999998755433222111 1 13578999 68877776543
Q ss_pred ---CCCeEEEEeCC---CCcee-eeeeeccc-----------ccEEEEEEecCCCEEEEeecC-CcEEEEEcCCCeEEEE
Q 021459 84 ---DDRTLRIWDAR---TPFDC-LKTLRGHS-----------DFVFCVNFNPQSNLIVSGSFD-ESIRIWEVKTGKCTRV 144 (312)
Q Consensus 84 ---~d~~v~~wd~~---~~~~~-~~~~~~~~-----------~~v~~~~~~~~~~~l~s~~~d-g~i~~wd~~~~~~~~~ 144 (312)
.+..|..||+. ++... ...+.... .....++..++|+..++++.. +.|...+.... ....
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEee
Confidence 25779999987 44221 11221111 247789999999999999888 88877776543 2222
Q ss_pred ee-ec-----CcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCC
Q 021459 145 IR-AH-----SMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEG 181 (312)
Q Consensus 145 ~~-~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (312)
+. .. ....+.++++|++..|++....+.+..+|+.+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 21 11 122569999999998888877999999998743
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.0016 Score=56.09 Aligned_cols=205 Identities=10% Similarity=0.069 Sum_probs=114.7
Q ss_pred ceEEEEECCC-C-CEEEEEeCCCeEEEEeCCCcceEEEeeec---cCCEEEEEE-------ccCCCeEEEEcCCC-----
Q 021459 24 AVSCVKFSND-G-TLLASASLDKTVIIWSASSLALVHRFVGH---SEGISDLAW-------SSDSHYICSASDDR----- 86 (312)
Q Consensus 24 ~v~~~~~s~~-~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~----- 86 (312)
.-..|+|+|. . +++++-...+.|++.|...+........- ......++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568899983 4 44455454577888898876654433221 235789999 99998666665543
Q ss_pred --eEEEEeCCCCceee-----eeeecccccEEEEEEecC-CCEEEEeecCCcEEEEEcC-------CCeE----------
Q 021459 87 --TLRIWDARTPFDCL-----KTLRGHSDFVFCVNFNPQ-SNLIVSGSFDESIRIWEVK-------TGKC---------- 141 (312)
Q Consensus 87 --~v~~wd~~~~~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~~wd~~-------~~~~---------- 141 (312)
.|.+.+........ ..+... .....++.+|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 25566533300110 111111 12345678895 4555566667889999987 5543
Q ss_pred -EEE-eee-cCcCeEEEEEccCCCE-EEEeeCCCeEEEEeC--CCCcee--eEcccC---C------------CCcEEEE
Q 021459 142 -TRV-IRA-HSMPVTSVHFNRDGSL-IVSGSHDGTCKIWDA--GEGACL--KTLIDD---K------------DPAVSFA 198 (312)
Q Consensus 142 -~~~-~~~-~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~--~~~~~~--~~~~~~---~------------~~~~~~~ 198 (312)
... +.. .....+.++|+|+|+. +++-+....|+.++. ..+... ..+.+. . ..+...+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 211 1233578999999995 445456678888554 332210 111111 0 1112134
Q ss_pred EEC-------CCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 199 KFS-------PNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 199 ~~~-------~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
... +++.++++=...+.|+.++ .++. +..+.
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 444 4566666666778999998 4554 34443
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.25 E-value=0.0012 Score=54.03 Aligned_cols=271 Identities=6% Similarity=-0.012 Sum_probs=133.3
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee----eccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV----GHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~ 97 (312)
...+.++.|.+.+..++. +..+.|. .....++-..... .....+.++.+.+ +..++ ++..+.|..- ...+.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEEE-SSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEEE-CCCCC
Confidence 457999999887777774 5667653 3333333222211 1234578898876 44444 4456654432 22111
Q ss_pred --eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe-eecCcCeEEEEEccCCCEEEEeeCCCeEE
Q 021459 98 --DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI-RAHSMPVTSVHFNRDGSLIVSGSHDGTCK 174 (312)
Q Consensus 98 --~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
+.+.....+.+.+..+.+.+++..++.+ .+|.|.. ....++.-... ......+..+.+.|++.+++.+...+..+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 1111111123446677776666655554 4565432 22233322222 23345688899999988877665544444
Q ss_pred EEeC--CCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc-CCceeEEEEEEEccCCcE
Q 021459 175 IWDA--GEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH-TNKKYCITSTFSVTNGKY 251 (312)
Q Consensus 175 iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 251 (312)
-.|. .+-+.+ .......+..+.+.+++..++ .+.+|.+++.+...++.-..+... ......+......+++.+
T Consensus 188 S~d~gG~tW~~~---~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 188 TWEPGQTAWEPH---NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp EECTTCSSCEEE---ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred EeCCCCCceeEC---CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 4553 122222 112234466677888887654 456787776542223221111111 001111222223345666
Q ss_pred EEEeecCCeEEEEECCch---heeecccCCccceEEEEEcCCCceEEEeeecCCeeEEEE
Q 021459 252 IVSGSEDNCVYVWDLQQK---TMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRTVRVW 308 (312)
Q Consensus 252 l~~~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~v~iw 308 (312)
++++ .+|.|. +....+ +.+.........+.++.+.+++ .+++++.+| +|.-+
T Consensus 264 ~~~g-~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G--~i~~~ 318 (327)
T 2xbg_A 264 WLAG-GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKG--ILLRY 318 (327)
T ss_dssp EEEE-STTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTT--EEEEE
T ss_pred EEEe-CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCc--eEEEE
Confidence 6655 466663 333322 2222111233567788887555 455666554 55443
No 287
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.23 E-value=0.0012 Score=53.28 Aligned_cols=227 Identities=14% Similarity=0.170 Sum_probs=114.8
Q ss_pred CCCEEEEEe-CC-----CeEEEEeCCCcceEEEeeeccC-CE-EEEEEccCCCeEEEEcCC-----CeEEEEeCCCCc--
Q 021459 33 DGTLLASAS-LD-----KTVIIWSASSLALVHRFVGHSE-GI-SDLAWSSDSHYICSASDD-----RTLRIWDARTPF-- 97 (312)
Q Consensus 33 ~~~~l~t~~-~d-----~~i~vw~~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~~~d-----~~v~~wd~~~~~-- 97 (312)
++.+++.|+ .+ ..+.+||..+.+... +..-.. .. .++ ...++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF-LPSITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe-CCCCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666666 32 357788877654321 111111 11 112 22356677777654 468889987643
Q ss_pred --eeeeeeecccccEEEEEEecCCCEEEEeecC-----CcEEEEEcCCCeEEEEeeecCcCe-EEEEEccCCCEEEEeeC
Q 021459 98 --DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD-----ESIRIWEVKTGKCTRVIRAHSMPV-TSVHFNRDGSLIVSGSH 169 (312)
Q Consensus 98 --~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~ 169 (312)
..+..+......-.++. .+++.++.|+.+ ..+.+||+.+++-...-....... .++.. .++++++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCC
Confidence 22222211111111222 256677777654 358889988776433211111111 12222 26777777775
Q ss_pred C-----CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCcee
Q 021459 170 D-----GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKY 238 (312)
Q Consensus 170 d-----~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~ 238 (312)
+ ..+..||+.+.+....-. .........+. .++..++.|+.+ ..+.+||..+.+....-........
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 4 458889988766443211 11111122222 256777777764 4689999988776544221111111
Q ss_pred EEEEEEEccCCcEEEEeecC-----CeEEEEECCch
Q 021459 239 CITSTFSVTNGKYIVSGSED-----NCVYVWDLQQK 269 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 269 (312)
..... .++++++.|+.+ ..|.+||+.+.
T Consensus 247 -~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 247 -VGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp -CEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred -eeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 11111 256777777765 45778887654
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.18 E-value=0.0022 Score=54.12 Aligned_cols=208 Identities=10% Similarity=0.005 Sum_probs=120.5
Q ss_pred ccceEEEEECCCCCEEEEE-eCCCeEEEEeCCCc----ceEEEeeeccCCEEEEEEccC-CCeEEEEcCCCeEEEEeCCC
Q 021459 22 SRAVSCVKFSNDGTLLASA-SLDKTVIIWSASSL----ALVHRFVGHSEGISDLAWSSD-SHYICSASDDRTLRIWDART 95 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~-~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~~wd~~~ 95 (312)
...+..++|++.+..|.-+ ...+.|+.++.... .....+.........+++.+. +++.++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4567789999866655544 45678888887652 222222223356778999885 44445555677899998875
Q ss_pred CceeeeeeecccccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe-eCCCe
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG-SHDGT 172 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~ 172 (312)
... .............++++|.+..|+.... .+.|...++............-.....+++++++..|..+ ...+.
T Consensus 191 ~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 191 VKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp CSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred Cce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 432 2222222334678899997666655543 3678888876443322222222456889999876655544 45678
Q ss_pred EEEEeCCCCceeeEcccC--CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEc
Q 021459 173 CKIWDAGEGACLKTLIDD--KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTG 232 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 232 (312)
|..+|+..... ..+... .......+++. .+..+.+-...+.|..+|..+++.+..+..
T Consensus 270 I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 270 ISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred EEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 99999864332 222221 11222333342 334445555667888888777766555543
No 289
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.17 E-value=0.0018 Score=52.71 Aligned_cols=205 Identities=10% Similarity=0.011 Sum_probs=117.5
Q ss_pred ccceEEEEECCCCCEEEEE-eCCCeEEEEeCCC----cceEEEeeeccCCEEEEEEccCCCeE-EEEcCCCeEEEEeCCC
Q 021459 22 SRAVSCVKFSNDGTLLASA-SLDKTVIIWSASS----LALVHRFVGHSEGISDLAWSSDSHYI-CSASDDRTLRIWDART 95 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~-~~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~~wd~~~ 95 (312)
.....+++|++++..|..+ ..++.|..++... ......+.........+++.+.+..| ++-...+.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3456789999876655544 4568899998775 22222222222345789998755444 4546678899999865
Q ss_pred CceeeeeeecccccEEEEEEecCCCEEEEeecC--CcEEEEEcCCCeEEEEe-eecCcCeEEEEEccCCCEEE-EeeCCC
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD--ESIRIWEVKTGKCTRVI-RAHSMPVTSVHFNRDGSLIV-SGSHDG 171 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~-~~~~d~ 171 (312)
... .............++++|.+..++.+... +.|...++.... ...+ ...-.....+++++++..|. +-+..+
T Consensus 109 ~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 109 VKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred Cce-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 322 11222223455788899876665555443 678888875332 2322 22223467899998765554 445567
Q ss_pred eEEEEeCCCCceeeEcccC--CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 172 TCKIWDAGEGACLKTLIDD--KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 172 ~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
.|..+|+.... .+.+... .......+++. .+..+++-...+.|..+|..+++.+..+
T Consensus 187 ~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 187 SISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred eEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 89999986432 2222211 11223334443 3445555556678888887666654444
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.15 E-value=2.4e-05 Score=70.98 Aligned_cols=228 Identities=7% Similarity=-0.016 Sum_probs=124.1
Q ss_pred CCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc-CCCeEEEEeCCCC---ceeeeeeecccccEEEEEEecC
Q 021459 43 DKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS-DDRTLRIWDARTP---FDCLKTLRGHSDFVFCVNFNPQ 118 (312)
Q Consensus 43 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~---~~~~~~~~~~~~~v~~~~~~~~ 118 (312)
.+.|++.++.+.+....+.. ...+..++|.+.+..|+.+. ..+.|+.+++... ......+.........+++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 35677777766554333222 24566889998776666553 4578888887641 1111111111112334667654
Q ss_pred C-CEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee-CC-CeEEEEeCCCCceeeEcccCCCCcE
Q 021459 119 S-NLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS-HD-GTCKIWDAGEGACLKTLIDDKDPAV 195 (312)
Q Consensus 119 ~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (312)
+ +++++-...+.|.++++........+.........++++|.+..|+... .. +.|..+++.... ...+........
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence 4 4455545567899999876543333332223457788998655444433 22 678777764322 222221222223
Q ss_pred EEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccC--CceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhee
Q 021459 196 SFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHT--NKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI 272 (312)
Q Consensus 196 ~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (312)
..++++|++..|..+ +..+.|..+|+........+.... .....+. . ..+.++++....+.|..++..+++.+
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla--v--d~~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--V--FEDKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE--E--ETTEEEEECSTTTCEEEEETTTEEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE--E--ECCEEEEEeCCCCeEEEEEccCCCce
Confidence 456789876555444 566789999986433322222111 1111222 2 13456677778899999998777666
Q ss_pred eccc
Q 021459 273 QKLD 276 (312)
Q Consensus 273 ~~~~ 276 (312)
..+.
T Consensus 619 ~~i~ 622 (699)
T 1n7d_A 619 NLLA 622 (699)
T ss_dssp ECCC
T ss_pred EEee
Confidence 5554
No 291
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.13 E-value=0.0022 Score=52.26 Aligned_cols=205 Identities=9% Similarity=0.007 Sum_probs=117.2
Q ss_pred ceEEEEECCCCCEE-EEEeCCCeEEEEeCCCcceE-EEeeeccCCEEEEEEccCCC-eEEEEcCCCeEEEEeCCCCceee
Q 021459 24 AVSCVKFSNDGTLL-ASASLDKTVIIWSASSLALV-HRFVGHSEGISDLAWSSDSH-YICSASDDRTLRIWDARTPFDCL 100 (312)
Q Consensus 24 ~v~~~~~s~~~~~l-~t~~~d~~i~vw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~~~~ 100 (312)
...++.|++.+..| .+-...+.|..++....... ..+.........+++.+.+. +..+-...+.|.++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~- 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK- 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-
Confidence 45678898865544 44455688988888765321 11222224556789987544 4455556678999998653221
Q ss_pred eeeecccccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEE-EEeeCCCeEEEEe
Q 021459 101 KTLRGHSDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLI-VSGSHDGTCKIWD 177 (312)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd 177 (312)
.........-..++++|.+..++.... .+.|...++............-.....++++|++..| ++=+..+.|..+|
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 112222334578889987666655553 5778888876432222222222345789999865554 4445667899998
Q ss_pred CCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 178 AGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
+.... .+.+..........+++.. +..+.+-...+.|..+|..+++....+.
T Consensus 195 ~dG~~-~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 195 LDGTN-RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTSCS-CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCc-eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 76432 2222221222233344432 3444444556788888876666544443
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.11 E-value=0.0055 Score=56.22 Aligned_cols=206 Identities=10% Similarity=0.011 Sum_probs=117.0
Q ss_pred ccceEEEEECCCCCEEE-EEeCCCeEEEEeCCCc----ceEEEeeeccCCEEEEEEccCCCeEE-EEcCCCeEEEEeCCC
Q 021459 22 SRAVSCVKFSNDGTLLA-SASLDKTVIIWSASSL----ALVHRFVGHSEGISDLAWSSDSHYIC-SASDDRTLRIWDART 95 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~-t~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~~ 95 (312)
...+.+++|++.+..|+ +-...+.|+.+++... .....+.........|++.+.+..|+ +-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 45567889988555444 4455678888887652 22222222334567899988775554 445677899999875
Q ss_pred CceeeeeeecccccEEEEEEecCCCEEEEeec--CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe-eCCCe
Q 021459 96 PFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF--DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG-SHDGT 172 (312)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~ 172 (312)
... ...+.........++++|....|+.... .+.|...++........+...-.....|++++.+..|+.+ .....
T Consensus 503 ~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 503 VKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 432 2222223344678999997666665543 2678888886544333333223457889999765555544 45668
Q ss_pred EEEEeCCCCceeeEcccC--CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 173 CKIWDAGEGACLKTLIDD--KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 173 i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
|..+++..... ..+... .-.....+++.. +.++++-...+.|...|..+++.+..+
T Consensus 582 I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 582 ISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEETTSCSC-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCce-EEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 88898854332 222221 111222333322 233344445678888887666554444
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.06 E-value=0.0045 Score=53.30 Aligned_cols=238 Identities=14% Similarity=0.181 Sum_probs=133.8
Q ss_pred EEEEEEcc-CCCeEEEEcC-CCeEEEEeCCCCceeeeeee-c---ccccEEEEEE-------ecCCCEEEEeecCC----
Q 021459 67 ISDLAWSS-DSHYICSASD-DRTLRIWDARTPFDCLKTLR-G---HSDFVFCVNF-------NPQSNLIVSGSFDE---- 129 (312)
Q Consensus 67 v~~~~~~~-~~~~l~~~~~-d~~v~~wd~~~~~~~~~~~~-~---~~~~v~~~~~-------~~~~~~l~s~~~dg---- 129 (312)
...|+|+| ++..|+.+.. .+.|++.|+... . +..+. . .......++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-M-LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT-E-EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC-E-EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 46789998 3555555543 456888888763 2 22222 1 1224788999 99999777666554
Q ss_pred ---cEEEEEcCC-CeEE-----EEeeecCcCeEEEEEcc-CCCEEEEeeCCCeEEEEeCC-------CCce---------
Q 021459 130 ---SIRIWEVKT-GKCT-----RVIRAHSMPVTSVHFNR-DGSLIVSGSHDGTCKIWDAG-------EGAC--------- 183 (312)
Q Consensus 130 ---~i~~wd~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~-------~~~~--------- 183 (312)
.|.+.+... ++.. ..+.... ....++++| ++.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665443 2211 1222112 335678899 55666677788889999987 4433
Q ss_pred --eeEcc-cCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCC--CcE--EEEEEcc---CC----------ceeEEEE
Q 021459 184 --LKTLI-DDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSA--GKF--LKIYTGH---TN----------KKYCITS 242 (312)
Q Consensus 184 --~~~~~-~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~--~~~--~~~~~~~---~~----------~~~~~~~ 242 (312)
...+. .........++++|+|+.|.++ +..+.|+.+++.. +.. ...+.+. .. .......
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 11211 1112334568899999965444 5678899977643 221 1223221 00 0011112
Q ss_pred EEEc-------cCCcEEEEeecCCeEEEEECCchheeecccCC------------------------ccceEEEEEcCC-
Q 021459 243 TFSV-------TNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGH------------------------TDSVISVTCHPT- 290 (312)
Q Consensus 243 ~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h------------------------~~~v~~l~~~p~- 290 (312)
.+.. .++.+.++-..+++|+.++. ++ .+.++.+. -.....|++.++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 2222 35677777788899999984 33 22222111 123678999997
Q ss_pred CceEEEeeecCCeeEEEEeec
Q 021459 291 ENKIASAGLDGDRTVRVWVQD 311 (312)
Q Consensus 291 ~~~l~~~~~dgd~~v~iw~~~ 311 (312)
+..+++=+ +..+||.+.++
T Consensus 456 g~lyVaD~--~N~rIrki~~~ 474 (496)
T 3kya_A 456 EMFYVHDQ--VGHTIRTISME 474 (496)
T ss_dssp TEEEEEET--TTTEEEEEEEC
T ss_pred CEEEEEeC--CCCEEEEEECC
Confidence 65555443 44678877653
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.06 E-value=0.0059 Score=54.54 Aligned_cols=158 Identities=7% Similarity=-0.060 Sum_probs=90.1
Q ss_pred cceEEEEECCCCCEE-EEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcC--CCeEEEEeCCCCcee
Q 021459 23 RAVSCVKFSNDGTLL-ASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASD--DRTLRIWDARTPFDC 99 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~~wd~~~~~~~ 99 (312)
.....+++++.++.| ++-...+.|.+.+.........+...-.....|++.|.+.+|+.... .+.|...++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~- 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR- 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-
Confidence 457789999865544 44456788999988765432222233345678999997666655542 35666666654221
Q ss_pred eeeeecccccEEEEEEecCCCEEEEee-cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeC
Q 021459 100 LKTLRGHSDFVFCVNFNPQSNLIVSGS-FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDA 178 (312)
Q Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (312)
.......-..-..+++++++..|+.+. ..+.|...|+..................+++..+ ..+.+-...+.|...|.
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 111111223456788998766665554 4577888888654332222211112245666554 45555556677888887
Q ss_pred CCCc
Q 021459 179 GEGA 182 (312)
Q Consensus 179 ~~~~ 182 (312)
.+++
T Consensus 242 ~tg~ 245 (619)
T 3s94_A 242 YTGE 245 (619)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 6654
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.05 E-value=0.0059 Score=54.53 Aligned_cols=224 Identities=5% Similarity=-0.057 Sum_probs=118.6
Q ss_pred CCeEEEEeCCCcc-eEEEeeeccCCEEEEEEccCCCeEEEEc-CCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCC
Q 021459 43 DKTVIIWSASSLA-LVHRFVGHSEGISDLAWSSDSHYICSAS-DDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSN 120 (312)
Q Consensus 43 d~~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 120 (312)
...|++.++.... ...........+..++|++.+..|+.+. ..+.|..+++...................+++++.++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4567777776542 1111222334577899999776666554 4567888887653211112222223567788988655
Q ss_pred EE-EEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee--CCCeEEEEeCCCCceeeEcccCCCCcEEE
Q 021459 121 LI-VSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS--HDGTCKIWDAGEGACLKTLIDDKDPAVSF 197 (312)
Q Consensus 121 ~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (312)
.+ ++-...+.|.+.++............-.....+++.|.+..|.... ..+.|...++.. .....+..........
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~G 175 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNG 175 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSSEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCCCcE
Confidence 54 4545568899999875443323322333467889998654444433 245666666543 2222333223344566
Q ss_pred EEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe
Q 021459 198 AKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM 271 (312)
Q Consensus 198 ~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 271 (312)
++++++++.|..+ ...+.|..+|+..........+.......+.. ..+.+..+-..++.|...|..+++.
T Consensus 176 lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~----~~~~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 176 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL----FEDILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEE----SSSEEEEECTTTCSEEEEESSSCCC
T ss_pred EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEE----eCCEEEEecCCCCEEEEEECCCCcc
Confidence 7888876666555 45678888888654332222211111222221 2235556666778888888765543
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.04 E-value=0.0033 Score=51.28 Aligned_cols=183 Identities=14% Similarity=0.295 Sum_probs=106.1
Q ss_pred CCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccC----CC---EEEEeeC---CCeEEEEeC--CCCceeeE
Q 021459 119 SNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRD----GS---LIVSGSH---DGTCKIWDA--GEGACLKT 186 (312)
Q Consensus 119 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---d~~i~iwd~--~~~~~~~~ 186 (312)
..+++....++-+.+||+ +|+.+..+.. ..++.+..-|+ |+ ++++... ++++.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 355666667788999999 7877777643 45566665552 22 2233333 578999965 3433 333
Q ss_pred ccc------CCCCcEEEEEE--CCC-CC-EEEEEecCCeEEEEEcC-------CCcEEEEEEccCCceeEEEEEEEccCC
Q 021459 187 LID------DKDPAVSFAKF--SPN-GK-FILVGTLDSTLKLWNYS-------AGKFLKIYTGHTNKKYCITSTFSVTNG 249 (312)
Q Consensus 187 ~~~------~~~~~~~~~~~--~~~-~~-~l~~~~~d~~i~v~d~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
+.. .......-+++ +|. ++ ++++...+|.+..|++. +.+.++.+....... .+...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E----gcvvDd~~ 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE----GMAADDEY 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE----EEEEETTT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc----eEEEcCCC
Confidence 311 11011222334 664 44 67778889999999883 224456665544322 22333456
Q ss_pred cEEEEeecCCeEEEEECC-----chheeeccc-CC-ccceEEEEE--cCCCc-eEEEeeecCCeeEEEEee
Q 021459 250 KYIVSGSEDNCVYVWDLQ-----QKTMIQKLD-GH-TDSVISVTC--HPTEN-KIASAGLDGDRTVRVWVQ 310 (312)
Q Consensus 250 ~~l~~~~~dg~i~iwd~~-----~~~~~~~~~-~h-~~~v~~l~~--~p~~~-~l~~~~~dgd~~v~iw~~ 310 (312)
..|..+-++.-|..++.. +.+.+..+. ++ ...+-.|++ .+++. +|+++ .-|+.+..+|+.
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS-sQG~~s~~Vydr 261 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS-SQGNSSYAIYDR 261 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE-EGGGTEEEEEES
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE-cCCCCEEEEEEC
Confidence 678888888767777754 234444442 22 346788887 55555 45544 445678888875
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.02 E-value=0.003 Score=50.79 Aligned_cols=184 Identities=14% Similarity=0.214 Sum_probs=96.5
Q ss_pred CCCEEEEeecC-----CcEEEEEcCCCe---EEEE--eeecCcCeEEEEEccCCCEEEEeeCC-----CeEEEEeCCCCc
Q 021459 118 QSNLIVSGSFD-----ESIRIWEVKTGK---CTRV--IRAHSMPVTSVHFNRDGSLIVSGSHD-----GTCKIWDAGEGA 182 (312)
Q Consensus 118 ~~~~l~s~~~d-----g~i~~wd~~~~~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 182 (312)
++..++.|+.+ ..+.+||+.+++ -... +.........+. .++++++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 46677777765 358899988765 2222 111111112222 267777777654 358889988765
Q ss_pred eeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEee
Q 021459 183 CLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGS 256 (312)
Q Consensus 183 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 256 (312)
...... .........+. .+++.++.|+.+ ..+.+||..+.+....-...... ....... .++++++.|+
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~--~~~~i~v~GG 214 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR-SGAGVAL--LNDHIYVVGG 214 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE--ETTEEEEECC
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc-ccceEEE--ECCEEEEEeC
Confidence 432211 11111122222 266777777654 46889998887765442111111 1111111 2567778887
Q ss_pred cC-----CeEEEEECCchh--eeecccCCccceEEEEEcCCCceEEEeeecCC---eeEEEEee
Q 021459 257 ED-----NCVYVWDLQQKT--MIQKLDGHTDSVISVTCHPTENKIASAGLDGD---RTVRVWVQ 310 (312)
Q Consensus 257 ~d-----g~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd---~~v~iw~~ 310 (312)
.+ ..+.+||+.+.+ .+..+.........+.+ +++.++.+|.++. ..|.+|++
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 64 468999987643 22222221112222223 6677788877654 34555554
No 298
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.90 E-value=0.0058 Score=49.16 Aligned_cols=225 Identities=13% Similarity=0.183 Sum_probs=111.7
Q ss_pred CCEEEEEeCC----CeEEEEeCCCcceEEEeeeccCC-E-EEEEEccCCCeEEEEcCC-----CeEEEEeCCCCce-eee
Q 021459 34 GTLLASASLD----KTVIIWSASSLALVHRFVGHSEG-I-SDLAWSSDSHYICSASDD-----RTLRIWDARTPFD-CLK 101 (312)
Q Consensus 34 ~~~l~t~~~d----~~i~vw~~~~~~~~~~~~~~~~~-v-~~~~~~~~~~~l~~~~~d-----~~v~~wd~~~~~~-~~~ 101 (312)
+.+++.||.+ ..+.+||..+.+... +..-..+ . .+++. .++.+++.|+.+ ..+.+||..+..- .+.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3455555543 357788877654321 2111110 0 12222 256667777644 3578888765321 111
Q ss_pred eeecccccEEEEEEecCCCEEEEeecCC-----cEEEEEcCCCeEEEEee--ecCcCeEEEEEccCCCEEEEeeCC----
Q 021459 102 TLRGHSDFVFCVNFNPQSNLIVSGSFDE-----SIRIWEVKTGKCTRVIR--AHSMPVTSVHFNRDGSLIVSGSHD---- 170 (312)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d---- 170 (312)
.+......-..+. -++..++.|+.++ .+.+||+.+++-...-. ...... +++. -++++++.|+.+
T Consensus 94 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTT
T ss_pred CCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCC
Confidence 1111111111122 2566777777653 47788988775433211 111111 2222 266777777643
Q ss_pred ---CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCceeEEE
Q 021459 171 ---GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKYCIT 241 (312)
Q Consensus 171 ---~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 241 (312)
..+..||+.+.+....-. .........+. .++++++.|+.+ ..+.+||..+.+....-........ ..
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~ 246 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN-AG 246 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CE
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc-Ce
Confidence 358889988765433211 11111122222 256777777754 4688999988766543221111111 11
Q ss_pred EEEEccCCcEEEEeecCC-----eEEEEECCch
Q 021459 242 STFSVTNGKYIVSGSEDN-----CVYVWDLQQK 269 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 269 (312)
.. ..++++++.|+.++ .+.+||+.+.
T Consensus 247 ~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 247 VC--AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EE--EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EE--EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 11 12577888887654 4888888654
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.88 E-value=0.0064 Score=49.17 Aligned_cols=158 Identities=6% Similarity=0.056 Sum_probs=98.4
Q ss_pred EEEEEecCCCEEEEee-cCCcEEEEEcCCCeEEEEeeec-------CcCeEEEEE---ccCCCEEEEee-----------
Q 021459 111 FCVNFNPQSNLIVSGS-FDESIRIWEVKTGKCTRVIRAH-------SMPVTSVHF---NRDGSLIVSGS----------- 168 (312)
Q Consensus 111 ~~~~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~----------- 168 (312)
.+++|++....++.++ ..++|..||...+......... ...+..+.+ .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3678988666766666 7899999998765433332111 113578999 68887777543
Q ss_pred --CCCeEEEEeCC---CCceeeEccc-----C-------CCCcEEEEEECCCCCEEEEEecC-CeEEEEEcCCCcEEEEE
Q 021459 169 --HDGTCKIWDAG---EGACLKTLID-----D-------KDPAVSFAKFSPNGKFILVGTLD-STLKLWNYSAGKFLKIY 230 (312)
Q Consensus 169 --~d~~i~iwd~~---~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~~~ 230 (312)
.+..+..+|+. +++....... . .......++.+++|+..++++.- +.|..++.........+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 25779999998 6655432210 0 11235667899999999988888 88888776543222222
Q ss_pred EccCC--ceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 231 TGHTN--KKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 231 ~~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
..... ......-....+++..|++....|.+..+|+..
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 21111 000011122346787777766699999999874
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.88 E-value=0.0064 Score=48.99 Aligned_cols=225 Identities=7% Similarity=0.066 Sum_probs=112.7
Q ss_pred CCEEEEEeC--CCeEEEEeCCCcceEEE--eeeccCCEEEEEEccCCCeEEEEcCC----CeEEEEeCCCCce-eeeeee
Q 021459 34 GTLLASASL--DKTVIIWSASSLALVHR--FVGHSEGISDLAWSSDSHYICSASDD----RTLRIWDARTPFD-CLKTLR 104 (312)
Q Consensus 34 ~~~l~t~~~--d~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~~wd~~~~~~-~~~~~~ 104 (312)
+.+++.||. ...+.+||..+.+-... +......- +++. .++.+++.|+.+ ..+.+||+.+..- .+..+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSC-EEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCccccee-EEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 334555554 35678888876543211 11111111 1222 356677777654 5688888876421 111111
Q ss_pred cccccEEEEEEecCCCEEEEeecC------CcEEEEEcCCCeEEEEeeec--CcCeEEEEEccCCCEEEEeeC-------
Q 021459 105 GHSDFVFCVNFNPQSNLIVSGSFD------ESIRIWEVKTGKCTRVIRAH--SMPVTSVHFNRDGSLIVSGSH------- 169 (312)
Q Consensus 105 ~~~~~v~~~~~~~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~------- 169 (312)
.....-..+. -+++.++.|+.+ ..+.+||+.+++-...-... ......+. -++++++.|+.
T Consensus 90 ~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 90 TPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTC
T ss_pred ccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcc
Confidence 1111111122 256677777765 45889999887643321111 11111222 26677777764
Q ss_pred --CCeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCceeEEE
Q 021459 170 --DGTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKYCIT 241 (312)
Q Consensus 170 --d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 241 (312)
...+.+||+.+.+....-. .........+.. ++++++.|+.+ ..+.+||..+.+....-...... ....
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~ 242 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG-VTVK 242 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB-SCCE
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc-ccee
Confidence 3458889988775433211 111111222222 56677777653 46889998887654431111111 1111
Q ss_pred EEEEccCCcEEEEeecC-----CeEEEEECCch
Q 021459 242 STFSVTNGKYIVSGSED-----NCVYVWDLQQK 269 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 269 (312)
... -++++++.|+.+ ..+.+||+.+.
T Consensus 243 ~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 243 CAA--VGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEE--ETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEE--ECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 111 256778888744 56888888664
No 301
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.87 E-value=0.0066 Score=49.03 Aligned_cols=226 Identities=9% Similarity=0.084 Sum_probs=112.4
Q ss_pred CCCEEEEEeCC----CeEEEEeCCCcceEEEeeeccCC--EEEEEEccCCCeEEEEcC----C-----CeEEEEeCCCCc
Q 021459 33 DGTLLASASLD----KTVIIWSASSLALVHRFVGHSEG--ISDLAWSSDSHYICSASD----D-----RTLRIWDARTPF 97 (312)
Q Consensus 33 ~~~~l~t~~~d----~~i~vw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~----d-----~~v~~wd~~~~~ 97 (312)
++.+++.||.+ ..+.+||..+.+-.. +..-..+ -.+++. .++.+++.|+. + ..+.+||+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLR-LADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeE-CCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 55666666632 357888887654322 1111100 012222 25666666665 2 357888876532
Q ss_pred e-eeeeeecccccEEEEEEecCCCEEEEeecC-----CcEEEEEcCCCeEEEEee--ecCcCeEEEEEccCCCEEEEeeC
Q 021459 98 D-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFD-----ESIRIWEVKTGKCTRVIR--AHSMPVTSVHFNRDGSLIVSGSH 169 (312)
Q Consensus 98 ~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
- .+..+......-..+.+ +++.++.|+.+ ..+.+||+.+++-...-. ........+.+ ++++++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 1 11111111111112222 56677777644 358889998775433211 11111122222 6677777775
Q ss_pred C-----CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCcee
Q 021459 170 D-----GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKY 238 (312)
Q Consensus 170 d-----~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~ 238 (312)
+ ..+..||+.+.+....-. .........+.+ +++.++.|+.+ ..+.+||..+.+....-...... .
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~ 254 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-S 254 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-B
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-c
Confidence 4 458889988765432111 111111222222 66777777654 56899999887654432111111 1
Q ss_pred EEEEEEEccCCcEEEEeecC-----CeEEEEECCch
Q 021459 239 CITSTFSVTNGKYIVSGSED-----NCVYVWDLQQK 269 (312)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 269 (312)
...... .++++++.|+.+ ..+.+||+.+.
T Consensus 255 ~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 255 ALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 111111 256777777754 45777777654
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.79 E-value=0.0099 Score=48.54 Aligned_cols=230 Identities=11% Similarity=0.064 Sum_probs=117.1
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee---eccCCEEEEEEccCCCeEEEEcCCCeEE-EEeCCCCc
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV---GHSEGISDLAWSSDSHYICSASDDRTLR-IWDARTPF 97 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~-~wd~~~~~ 97 (312)
...+.++.|+| +..++ ++.++.|.. ....++-..... .+...+..+.+.+++..++.+. ++.|. -.|--...
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW 154 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNW 154 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSE
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCC
Confidence 34688888876 44444 455665443 333333222222 1234577888877777666654 55442 22321111
Q ss_pred eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEE-EEcCCCeEEEEe-eecCcCeEEEEEccCCCEEEEeeCCCeEEE
Q 021459 98 DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRI-WEVKTGKCTRVI-RAHSMPVTSVHFNRDGSLIVSGSHDGTCKI 175 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~-wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (312)
+. ........+..+.+.+++.+++.+. +|.+.. .|- .++.-..+ ......+..+.+.++++.++ ++.+|.+.+
T Consensus 155 ~~--~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~ 229 (327)
T 2xbg_A 155 QA--LVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAF 229 (327)
T ss_dssp EE--EECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEE
T ss_pred EE--eecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEE
Confidence 11 1223445678899999887776654 455543 332 12211111 22345678888999887654 456777776
Q ss_pred EeCCCCceeeEcccC---CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEcc---CCceeEEEEEEEccCC
Q 021459 176 WDAGEGACLKTLIDD---KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGH---TNKKYCITSTFSVTNG 249 (312)
Q Consensus 176 wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 249 (312)
.+...++.-..+... ....+..+.+.+++..++++ .++.|. +....++.-...... ....+.+. +. .++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~--~~-~~~ 304 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKIL--FF-SPD 304 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCEE-EESSTTSSCEECGGGTTSSSCCCEEE--EE-ETT
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEE--EE-CCC
Confidence 632222221111111 12235666788877766655 467663 334444432222211 12223332 22 333
Q ss_pred cEEEEeecCCeEEEEEC
Q 021459 250 KYIVSGSEDNCVYVWDL 266 (312)
Q Consensus 250 ~~l~~~~~dg~i~iwd~ 266 (312)
.++.++.+|.|.-++-
T Consensus 305 -~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 -QGFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEEECSTTEEEEECC
T ss_pred -ceEEEcCCceEEEEcC
Confidence 4666678898776653
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.79 E-value=0.00018 Score=65.26 Aligned_cols=205 Identities=9% Similarity=0.015 Sum_probs=109.7
Q ss_pred ceEEEEECCCCCEEEEEe-CCCeEEEEeCCC----cceEEEeeeccCCEEEEEEccCC-CeEEEEcCCCeEEEEeCCCCc
Q 021459 24 AVSCVKFSNDGTLLASAS-LDKTVIIWSASS----LALVHRFVGHSEGISDLAWSSDS-HYICSASDDRTLRIWDARTPF 97 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~-~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~~wd~~~~~ 97 (312)
.+..++|++.+..|+.+. ..+.|+.+++.+ ......+.........|++.+.+ +++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456788888776666553 457888888764 12111111111234567887654 444444556789999876532
Q ss_pred eeeeeeecccccEEEEEEecCCCEEEEeec-C-CcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCC-EEEEeeCCCeEE
Q 021459 98 DCLKTLRGHSDFVFCVNFNPQSNLIVSGSF-D-ESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGS-LIVSGSHDGTCK 174 (312)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~ 174 (312)
. ...+.........++++|.+..|+.... . +.|..+++............-.....|+++|++. ++++-+..+.|.
T Consensus 487 ~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 487 R-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp E-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred e-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 1 1112111223456778886655554443 2 6788777653322212111122356899998654 555555677899
Q ss_pred EEeCCCCceeeEcccC--CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 175 IWDAGEGACLKTLIDD--KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 175 iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
.+|+.... .+.+... .......+++..+ .++++....+.|..+|..+++.+..+.
T Consensus 566 ~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 566 SIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 99986432 2222211 1111112223333 344445566789998887777665543
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.75 E-value=0.011 Score=47.70 Aligned_cols=223 Identities=10% Similarity=0.122 Sum_probs=112.0
Q ss_pred CeEEEEcC--CCeEEEEeCCCCce-eeeeeecccccEEEEEEecCCCEEEEeecC----CcEEEEEcCCCeEEEEeeec-
Q 021459 77 HYICSASD--DRTLRIWDARTPFD-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFD----ESIRIWEVKTGKCTRVIRAH- 148 (312)
Q Consensus 77 ~~l~~~~~--d~~v~~wd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~~~- 148 (312)
.+++.|+. ...+.+||..+..- .+..+......-..+. -++..++.|+.+ ..+.+||+.+++-...-...
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555554 35688888766321 1111111111111122 255677777755 56888999887643321111
Q ss_pred -CcCeEEEEEccCCCEEEEeeCC------CeEEEEeCCCCceeeEccc-CCCCcEEEEEECCCCCEEEEEec--------
Q 021459 149 -SMPVTSVHFNRDGSLIVSGSHD------GTCKIWDAGEGACLKTLID-DKDPAVSFAKFSPNGKFILVGTL-------- 212 (312)
Q Consensus 149 -~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-------- 212 (312)
......+. -++++++.|+.+ ..+.+||+.+.+....-.. ........+. .+++.++.|+.
T Consensus 91 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 91 PRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCE
T ss_pred cccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccc
Confidence 11112222 267777777765 4588899887654332111 1111112222 26667777753
Q ss_pred -CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC-----CeEEEEECCchh--eeecccCCccceEE
Q 021459 213 -DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED-----NCVYVWDLQQKT--MIQKLDGHTDSVIS 284 (312)
Q Consensus 213 -d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~--~~~~~~~h~~~v~~ 284 (312)
...+.+||..+.+....-...... ....... .++++++.|+.+ ..+.+||+.+.+ .+..+.........
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEAR-KNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCC-BSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ccceEEEeCCCCCeEEECCCccchh-hcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 345889999887654432111111 1111111 256777777654 458899987642 33333222222233
Q ss_pred EEEcCCCceEEEeeecCC---eeEEEEee
Q 021459 285 VTCHPTENKIASAGLDGD---RTVRVWVQ 310 (312)
Q Consensus 285 l~~~p~~~~l~~~~~dgd---~~v~iw~~ 310 (312)
+.+ ++..++.+|.++. ..+..|++
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 333 6677888876654 34555554
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.75 E-value=0.012 Score=48.50 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=114.0
Q ss_pred CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeee---cccccEEEEEEecC---CCEEEEeec-C-----CcEE
Q 021459 65 EGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLR---GHSDFVFCVNFNPQ---SNLIVSGSF-D-----ESIR 132 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~-d-----g~i~ 132 (312)
.....++|.|+|+++++ ..++.|.+++ ......+..+. ........++++|+ +..|+.+.. . +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 34678999999985555 5669999998 22111121111 11245678999998 555544433 2 5688
Q ss_pred EEEcCCCeE---EEE---eee---cCcCeEEEEEccCCCEEEEeeC-------------CCeEEEEeCCCCceee-----
Q 021459 133 IWEVKTGKC---TRV---IRA---HSMPVTSVHFNRDGSLIVSGSH-------------DGTCKIWDAGEGACLK----- 185 (312)
Q Consensus 133 ~wd~~~~~~---~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~~~~----- 185 (312)
.++...++. ... +.. .......++|.|+|.+.++.+. .+.|.-++... ....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf~ 187 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNPFL 187 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCccc
Confidence 888764321 111 221 0112368999999987776432 14555555432 1000
Q ss_pred -------EcccCCCCcEEEEEECC-CCCEEEEEecCCe--------EEEEEcCCCc------------------EEEEEE
Q 021459 186 -------TLIDDKDPAVSFAKFSP-NGKFILVGTLDST--------LKLWNYSAGK------------------FLKIYT 231 (312)
Q Consensus 186 -------~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~--------i~v~d~~~~~------------------~~~~~~ 231 (312)
++....-.....++++| ++.++++-...+. |.+. ..+. .+..+.
T Consensus 188 ~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 188 GRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 00000001123356888 5665554332222 3322 2221 001110
Q ss_pred ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhe------eecccCCccceEEEEEcCCCceEEEee
Q 021459 232 GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTM------IQKLDGHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
.+ . ......+ .++.++++.-..+.|...++..... ...+-.-...+..+++.|+|..+++..
T Consensus 266 ~~-~--ap~G~~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 QG-F--PPGNLAF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TC-C--CEEEEEE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CC-C--CCcceEE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 01 1 1122222 3577777777778888887754321 112212234689999999997776654
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.68 E-value=0.013 Score=46.98 Aligned_cols=184 Identities=16% Similarity=0.234 Sum_probs=95.3
Q ss_pred CCCEEEEeecC-----CcEEEEEcCCCeEEEEeee--cCcCeEEEEEccCCCEEEEeeCCC-----eEEEEeCCCCceee
Q 021459 118 QSNLIVSGSFD-----ESIRIWEVKTGKCTRVIRA--HSMPVTSVHFNRDGSLIVSGSHDG-----TCKIWDAGEGACLK 185 (312)
Q Consensus 118 ~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~ 185 (312)
++..++.|+.+ ..+.+||..+++-...-.. .......+. -++++++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 56677777755 3588899887764332111 111112222 2667777777553 47788988765433
Q ss_pred Ecc-cCCCCcEEEEEECCCCCEEEEEecC-------CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeec
Q 021459 186 TLI-DDKDPAVSFAKFSPNGKFILVGTLD-------STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE 257 (312)
Q Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (312)
.-. .........+. .+++.++.|+.+ ..+.+||..+.+....-...... ....... .++++++.|+.
T Consensus 139 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~--~~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-SGAGVGV--LNNLLYAVGGH 213 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-BSCEEEE--ETTEEEEECCB
T ss_pred cCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-ccccEEE--ECCEEEEECCC
Confidence 211 11111112222 256677777542 45889998887665432111111 1111111 25778888876
Q ss_pred C-----CeEEEEECCchh--eeecccCCccceEEEEEcCCCceEEEeeecCC---eeEEEEee
Q 021459 258 D-----NCVYVWDLQQKT--MIQKLDGHTDSVISVTCHPTENKIASAGLDGD---RTVRVWVQ 310 (312)
Q Consensus 258 d-----g~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd---~~v~iw~~ 310 (312)
+ ..+.+||+.+.+ .+..+.........+.+ ++..++.+|.++. ..+.+|++
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcC
Confidence 4 468899987643 22222211111122222 6677788876643 24666654
No 307
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.015 Score=47.08 Aligned_cols=212 Identities=10% Similarity=0.085 Sum_probs=105.1
Q ss_pred eEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeec----C-------CcEEEEEcCCCeEEEEee
Q 021459 78 YICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF----D-------ESIRIWEVKTGKCTRVIR 146 (312)
Q Consensus 78 ~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d-------g~i~~wd~~~~~~~~~~~ 146 (312)
+++.|+ ..+..||..+..-....+..............++..++.|+. + ..+..||..+++-... .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-P 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-C
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-C
Confidence 344555 568889987653222222111112222223356778888874 1 1277889887754321 1
Q ss_pred ecCcCe--EEEEEccCCCEEEEeeCC--------CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEec-C-
Q 021459 147 AHSMPV--TSVHFNRDGSLIVSGSHD--------GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTL-D- 213 (312)
Q Consensus 147 ~~~~~v--~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~-d- 213 (312)
.-..+- .+++. -++++++.|+.+ ..+.+||+.+.+...... .........+ ..+++.++.|+. +
T Consensus 84 ~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL--SHMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCTT
T ss_pred CCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE--EECCEEEEEeCCCCC
Confidence 111111 11222 266777777742 458889988765432111 1111111222 246677777776 2
Q ss_pred ----CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC-----eEEEEECCchh--eeecccCCccce
Q 021459 214 ----STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN-----CVYVWDLQQKT--MIQKLDGHTDSV 282 (312)
Q Consensus 214 ----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~--~~~~~~~h~~~v 282 (312)
..+.+||..+.+....-........ ..... .++++++.|+.++ .+.+||+.+.+ .+..+.......
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 237 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSL-FGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL 237 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhc-eEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence 4688999888765443211111111 11111 2567778777654 58889987642 232222111122
Q ss_pred EEEEEcCCCceEEEeeec
Q 021459 283 ISVTCHPTENKIASAGLD 300 (312)
Q Consensus 283 ~~l~~~p~~~~l~~~~~d 300 (312)
..+.+ ++..++.||.+
T Consensus 238 ~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 238 SLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp EEEEE--TTEEEEEEEEE
T ss_pred eEEEE--CCEEEEECCcc
Confidence 22223 56777888764
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.66 E-value=0.015 Score=46.86 Aligned_cols=235 Identities=12% Similarity=0.177 Sum_probs=137.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc-
Q 021459 29 KFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHS- 107 (312)
Q Consensus 29 ~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~- 107 (312)
-.+|..+.||--. ...+.++|+++...+....- .+.|.-=.|-.+..+-++. +..|+-|+++....+.+.+..|.
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT--~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEE--SSEEEEEESSTTCCCEEEEECCGG
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEEc--CCcEEEEcccCCCCCceeeecchh
Confidence 3577777766654 57899999999877666543 4566666676555443332 56899999976445555555443
Q ss_pred ---ccEEEEEEecCCCEEEEeec-------CCcEEEEEcCCCeEEEEeeecCcCeEEEEEcc--CC-CEEEEeeC---CC
Q 021459 108 ---DFVFCVNFNPQSNLIVSGSF-------DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNR--DG-SLIVSGSH---DG 171 (312)
Q Consensus 108 ---~~v~~~~~~~~~~~l~s~~~-------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~l~~~~~---d~ 171 (312)
..|..-..+++.++++-.+- .|.+.+|..+.+. .+.+++|......+...- .. .+|.-+.. .+
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 23445555777787654432 3678899987654 455666654332222211 11 12332222 25
Q ss_pred eEEEEeCCCC---ce-----eeE-cccC---CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 172 TCKIWDAGEG---AC-----LKT-LIDD---KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 172 ~i~iwd~~~~---~~-----~~~-~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
.+.+.++... .. ... +... .+-++ .+..++.-..+..-+.-|.+++||+.++.++..-.-..+....
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV-amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceE-EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 7888887432 10 011 1111 12223 3456777778888899999999999999987665444443321
Q ss_pred EEEEEEccCCcEEEEeecCCeEEEEECCchhee
Q 021459 240 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI 272 (312)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (312)
+ +.. ....=++....+|.|.--.+++...+
T Consensus 307 -t-a~~-~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 307 -T-APH-EATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp -E-EEE-GGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred -e-ccc-CCCCcEEEEcCCCEEEEEEECcccEe
Confidence 1 222 22334555668888887777665443
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.63 E-value=0.032 Score=49.94 Aligned_cols=227 Identities=5% Similarity=-0.101 Sum_probs=130.6
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEEee-eccCCEEEEEEccCCCeEEEE-cCCCeEEEEeCCCCceeeeeeecccccEEEE
Q 021459 36 LLASASLDKTVIIWSASSLALVHRFV-GHSEGISDLAWSSDSHYICSA-SDDRTLRIWDARTPFDCLKTLRGHSDFVFCV 113 (312)
Q Consensus 36 ~l~t~~~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~ 113 (312)
+|+.+ ..+.|+..++.+......+. ..-..+..++|++.+..|+.+ ..++.|..+++..... .............+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcceE
Confidence 44443 34678888887654322221 123467799999976655544 4568888888764321 11121111234567
Q ss_pred EEecCCCEE-EEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEee--CCCeEEEEeCCCCceeeEcccC
Q 021459 114 NFNPQSNLI-VSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS--HDGTCKIWDAGEGACLKTLIDD 190 (312)
Q Consensus 114 ~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~ 190 (312)
++++.+..| ++-...+.|.+.++............-.....+++.|....|.... ..+.|...++.... ...+..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~- 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVP- 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEEC-
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEEC-
Confidence 787765544 4444567899999865433222222334468999998544444433 25677777765433 222222
Q ss_pred CCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCch
Q 021459 191 KDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQK 269 (312)
Q Consensus 191 ~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 269 (312)
.......++++++++.|..+ ...+.|..+|+..... ..+.........+. .. .+.++.+-...+.|...|..++
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gla--v~--~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLT--QY--QDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEE--EE--TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEE--EE--CCEEEEecCCCCEEEEEECCCC
Confidence 23445667889877666665 4567899999865443 33333333333332 22 3556666667888988887555
Q ss_pred he
Q 021459 270 TM 271 (312)
Q Consensus 270 ~~ 271 (312)
+.
T Consensus 239 ~~ 240 (628)
T 4a0p_A 239 QN 240 (628)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.55 E-value=0.022 Score=45.89 Aligned_cols=184 Identities=14% Similarity=0.157 Sum_probs=94.5
Q ss_pred CCCEEEEeec----C-----CcEEEEEcCCCeEEEEe--eecCcCeEEEEEccCCCEEEEeeCC-----CeEEEEeCCCC
Q 021459 118 QSNLIVSGSF----D-----ESIRIWEVKTGKCTRVI--RAHSMPVTSVHFNRDGSLIVSGSHD-----GTCKIWDAGEG 181 (312)
Q Consensus 118 ~~~~l~s~~~----d-----g~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~ 181 (312)
++..++.|+. + ..+.+||+.+++-...- .........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5567777765 2 46888998877543221 111111122222 66777777643 35788998876
Q ss_pred ceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEe
Q 021459 182 ACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 182 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
+...... .........+.+ ++..++.|+.+ ..+.+||..+.+....-...... ....... .++++++.|
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~--~~~~iyv~G 222 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR-SGAGVCV--LHNCIYAAG 222 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEE--ETTEEEEEC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc-ccceEEE--ECCEEEEEe
Confidence 5432211 111111222222 66777777654 46889998877654331111111 1111111 257777888
Q ss_pred ecC-----CeEEEEECCchhe--eecccCCccceEEEEEcCCCceEEEeeecCC---eeEEEEee
Q 021459 256 SED-----NCVYVWDLQQKTM--IQKLDGHTDSVISVTCHPTENKIASAGLDGD---RTVRVWVQ 310 (312)
Q Consensus 256 ~~d-----g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd---~~v~iw~~ 310 (312)
+.+ ..+.+||+.+.+- +..+.........+.+ ++..++.+|.++. ..+.++++
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence 764 5689999876432 2222221112222222 5677788876653 24555554
No 311
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.50 E-value=0.027 Score=45.63 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=98.9
Q ss_pred eEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeec----CC-------cEEEEEcCCCeEEEEe--eecCcCeE
Q 021459 87 TLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF----DE-------SIRIWEVKTGKCTRVI--RAHSMPVT 153 (312)
Q Consensus 87 ~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg-------~i~~wd~~~~~~~~~~--~~~~~~v~ 153 (312)
.+..||..+..-....+..............++..++.|+. ++ .+..||..+++-...- ...... .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c
Confidence 37788887643222112111111122223456677777773 11 1778888876543221 111111 1
Q ss_pred EEEEccCCCEEEEeeCC-------CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec------CCeEEEEE
Q 021459 154 SVHFNRDGSLIVSGSHD-------GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL------DSTLKLWN 220 (312)
Q Consensus 154 ~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~v~d 220 (312)
+++. -++++++.|+.+ ..+.+||+.+.+....-. ...+.........+++.++.|+. ...+.+||
T Consensus 104 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 2222 266777777754 247788988765443211 11111111112246677777764 24589999
Q ss_pred cCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC-----CeEEEEECCchh--eeecccCCccceEEEEEcCCCce
Q 021459 221 YSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED-----NCVYVWDLQQKT--MIQKLDGHTDSVISVTCHPTENK 293 (312)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~p~~~~ 293 (312)
..+.+....-....... ...... .++++++.|+.+ ..+.+||+.+.+ .+..+.........+.+ ++..
T Consensus 182 ~~~~~W~~~~~~p~~r~-~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 256 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRS-MFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSL 256 (318)
T ss_dssp TTTTEEEEECCCSSCCB-SCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred CCCCEEEECCCCCCCcc-cceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEE
Confidence 98877654321111111 111111 256777777643 357788886543 23223222112222222 5677
Q ss_pred EEEeeecC
Q 021459 294 IASAGLDG 301 (312)
Q Consensus 294 l~~~~~dg 301 (312)
++.||.++
T Consensus 257 ~v~GG~~~ 264 (318)
T 2woz_A 257 YAIGGFAM 264 (318)
T ss_dssp EEECCBCC
T ss_pred EEECCeec
Confidence 77777653
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.46 E-value=0.038 Score=46.43 Aligned_cols=235 Identities=11% Similarity=0.184 Sum_probs=138.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeeccc-
Q 021459 29 KFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHS- 107 (312)
Q Consensus 29 ~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~- 107 (312)
-.+|..+.||--. ...+.|+|+++...+....- .+.|.-=.|-.+.. |+-. .+..|+-|++.....+.+.+..|.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETTE-EEEE-CSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCCe-EEEE-cCCeeEEecccCCCCchhheecchh
Confidence 3567677666544 67999999998877665543 34555556655544 3333 366899999975445555555443
Q ss_pred ---ccEEEEEEecCCCEEEEeec-------CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCC---CEEEEeeC---CC
Q 021459 108 ---DFVFCVNFNPQSNLIVSGSF-------DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDG---SLIVSGSH---DG 171 (312)
Q Consensus 108 ---~~v~~~~~~~~~~~l~s~~~-------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---d~ 171 (312)
..|..-..+++.++++-.+. .|.+.+|..+.+. .+.+++|......+...-+. .++.-+.. .+
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 24555556778887654332 3678899987654 45566665444333322111 13333333 26
Q ss_pred eEEEEeCCCC---c-----eeeEc-ccC---CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeE
Q 021459 172 TCKIWDAGEG---A-----CLKTL-IDD---KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYC 239 (312)
Q Consensus 172 ~i~iwd~~~~---~-----~~~~~-~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 239 (312)
.+.+.++... . ....+ ... .+-++ .+..++.-..+..-+.-|.+++||+.++..+..-.-..+....
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv-amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCcee-EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEE
Confidence 8888887543 1 01111 111 12223 3457777778888899999999999999987665544443322
Q ss_pred EEEEEEccCCcEEEEeecCCeEEEEECCchhee
Q 021459 240 ITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI 272 (312)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (312)
.+.. ....=++.....|.|.--.+++...+
T Consensus 306 --t~~~-~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 306 --TAPH-EATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp --EEEE-TTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred --eccc-CCCCcEEEEccCceEEEEEEccccch
Confidence 2222 23334555668888887777655443
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.41 E-value=0.1 Score=50.18 Aligned_cols=73 Identities=21% Similarity=0.243 Sum_probs=50.3
Q ss_pred ccceEEEEECCC------CCEEEEEeC-CCeEEEEeCCCcceEEEeeec-cCCEEEEEEcc--CCCeEEEEcCCCeEEEE
Q 021459 22 SRAVSCVKFSND------GTLLASASL-DKTVIIWSASSLALVHRFVGH-SEGISDLAWSS--DSHYICSASDDRTLRIW 91 (312)
Q Consensus 22 ~~~v~~~~~s~~------~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~d~~v~~w 91 (312)
.+.|.|+++.|. +++++.|.. |++++|+++.+.+.+....-. .....++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999863 368888886 999999999887665443211 12345554432 34588899999988666
Q ss_pred eCC
Q 021459 92 DAR 94 (312)
Q Consensus 92 d~~ 94 (312)
.+.
T Consensus 633 ~~d 635 (1158)
T 3ei3_A 633 GLN 635 (1158)
T ss_dssp EEC
T ss_pred EEc
Confidence 543
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.39 E-value=0.037 Score=44.72 Aligned_cols=224 Identities=8% Similarity=0.073 Sum_probs=109.6
Q ss_pred EEEEEeCCCeEEEEeCCCcceEE-EeeeccCCEEEEEEccCCCeEEEEcC-----C------CeEEEEeCCCCc-eeeee
Q 021459 36 LLASASLDKTVIIWSASSLALVH-RFVGHSEGISDLAWSSDSHYICSASD-----D------RTLRIWDARTPF-DCLKT 102 (312)
Q Consensus 36 ~l~t~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~v~~wd~~~~~-~~~~~ 102 (312)
+++.|+ ..+.+||..+.+-.. .+.........-+...++.+++.|+. . ..+..||..+.. ..+..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 578889988765422 11111111222223346777777763 1 126778876532 11111
Q ss_pred eecccccEEEEEEecCCCEEEEeecC--------CcEEEEEcCCCeEEEEeeecCcCe-EEEEEccCCCEEEEeeC-C--
Q 021459 103 LRGHSDFVFCVNFNPQSNLIVSGSFD--------ESIRIWEVKTGKCTRVIRAHSMPV-TSVHFNRDGSLIVSGSH-D-- 170 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~~wd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~-d-- 170 (312)
+...... .+++. -++..++.|+.+ ..+.+||+.+++-...-....... .+++. .++++++.|+. +
T Consensus 85 ~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 85 LPSPRCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDR 161 (315)
T ss_dssp BSSCEES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTS
T ss_pred CCcchhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCC
Confidence 1110011 11121 245667777642 358899998775332211111111 12222 36677777776 2
Q ss_pred ---CeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecCC-----eEEEEEcCCCcEEEEEEccCCceeEEE
Q 021459 171 ---GTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLDS-----TLKLWNYSAGKFLKIYTGHTNKKYCIT 241 (312)
Q Consensus 171 ---~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~~~~ 241 (312)
..+.+||+.+.+...... .........+. -+++.++.|+.++ .+.+||..+.+....-........ ..
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~ 238 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS-LS 238 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS-CE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc-ee
Confidence 468899988765433211 11111112222 2667777777654 588899888766544221111111 11
Q ss_pred EEEEccCCcEEEEeecCC--------------eEEEEECCch
Q 021459 242 STFSVTNGKYIVSGSEDN--------------CVYVWDLQQK 269 (312)
Q Consensus 242 ~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~ 269 (312)
... .++++++.|+.++ .+.+||+.+.
T Consensus 239 ~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 239 LVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 111 2567777777542 3667887654
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.34 E-value=0.03 Score=42.45 Aligned_cols=175 Identities=12% Similarity=0.029 Sum_probs=93.3
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCcce-----EEEeeec--cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce-----e
Q 021459 32 NDGTLLASASLDKTVIIWSASSLAL-----VHRFVGH--SEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-----C 99 (312)
Q Consensus 32 ~~~~~l~t~~~d~~i~vw~~~~~~~-----~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-----~ 99 (312)
|.+.+|+....| +++.=....... .....++ =..+..++|+|+|.+.++ .+|.++-.+..+... .
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc
Confidence 345567777777 665544433221 1112223 236779999999886665 677766655433110 0
Q ss_pred eeee--ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEE------EEe-eecCcCeEEEEEccCCCEEEEeeCC
Q 021459 100 LKTL--RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCT------RVI-RAHSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 100 ~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
-..+ .+-.. -.++.|.|++.+.++ .||.|+-++..+.... ..+ ..-=..+..+.+.|+|.+.++. |
T Consensus 79 ~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 79 AKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp CEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred ccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 0111 01111 357889999988877 5698887775332110 011 1011357889999999877766 7
Q ss_pred CeEEEEeCCCCce-----eeEccc-CCCCcEEEEEECCCCCEEEEEecCCeE
Q 021459 171 GTCKIWDAGEGAC-----LKTLID-DKDPAVSFAKFSPNGKFILVGTLDSTL 216 (312)
Q Consensus 171 ~~i~iwd~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
+.+.-.....+.. ...... ..-.....+.+++++.+.++. ++.+
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 7654333222110 011111 112234556688888766655 6644
No 316
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.27 E-value=0.032 Score=45.97 Aligned_cols=179 Identities=11% Similarity=0.078 Sum_probs=87.9
Q ss_pred CCCEEEEeec-C---------CcEEEEEcCCCeEEEEeeec-CcCe-EEEEEccCCCEEEEeeCC---------------
Q 021459 118 QSNLIVSGSF-D---------ESIRIWEVKTGKCTRVIRAH-SMPV-TSVHFNRDGSLIVSGSHD--------------- 170 (312)
Q Consensus 118 ~~~~l~s~~~-d---------g~i~~wd~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~~~~~d--------------- 170 (312)
++.+++.|+. + ..+.+||+.+.+-...-... .... .++.. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 4567777776 2 46889999887543321111 1111 12222 467777888754
Q ss_pred ------------------------CeEEEEeCCCCceeeE--cccCCCCcEEEEEECCCCCEEEEEec------CCeEEE
Q 021459 171 ------------------------GTCKIWDAGEGACLKT--LIDDKDPAVSFAKFSPNGKFILVGTL------DSTLKL 218 (312)
Q Consensus 171 ------------------------~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~------d~~i~v 218 (312)
..+.+||+.+.+.... +..........+. -++++++.|+. ...+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEE
Confidence 5788999887654332 1111111122222 25667777653 345777
Q ss_pred EEc--CCCcEEEEEEccCCc-eeEEEEEEEccCCcEEEEeecC----------------------CeEEEEECCch--he
Q 021459 219 WNY--SAGKFLKIYTGHTNK-KYCITSTFSVTNGKYIVSGSED----------------------NCVYVWDLQQK--TM 271 (312)
Q Consensus 219 ~d~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~--~~ 271 (312)
||+ .+.+....-...... .....+ ...++++++.|+.+ ..+.+||+.+. +.
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFA--GISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEE--EEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred EEecCCCCcEEecCCCCCCcccccceE--EEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 876 444433321111111 111111 11356777777632 25778998754 23
Q ss_pred eecccCCccceEEEEEcCCCceEEEeeecCCe
Q 021459 272 IQKLDGHTDSVISVTCHPTENKIASAGLDGDR 303 (312)
Q Consensus 272 ~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~ 303 (312)
+..+........++. .+++.++.||.++++
T Consensus 300 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 300 SGELSQGRAYGVSLP--WNNSLLIIGGETAGG 329 (357)
T ss_dssp EEECSSCCBSSEEEE--ETTEEEEEEEECGGG
T ss_pred CCCCCCCcccceeEE--eCCEEEEEeeeCCCC
Confidence 333332222222222 367888889977643
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.15 E-value=0.078 Score=43.69 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=59.4
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcce--EEEee---eccCCEEEEEEccC---CCeEEEEcC-C-----CeE
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLAL--VHRFV---GHSEGISDLAWSSD---SHYICSASD-D-----RTL 88 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~v 88 (312)
..-..++|.|+|+++++ ..++.|++++ .++. +..+. ........|+++|+ +..|..+.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34568999999996665 4569999988 3332 22111 11346789999998 555554432 2 567
Q ss_pred EEEeCCCC----ce-eeeeee---cccccEEEEEEecCCCEEEEee
Q 021459 89 RIWDARTP----FD-CLKTLR---GHSDFVFCVNFNPQSNLIVSGS 126 (312)
Q Consensus 89 ~~wd~~~~----~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
..++.... .+ .+..+. +.......++|.||+.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 77776532 11 112122 1111235789999998777654
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.15 E-value=0.08 Score=43.69 Aligned_cols=229 Identities=8% Similarity=0.032 Sum_probs=116.0
Q ss_pred CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeee---cccccEEEEEEecC---CCEEEEeec----C----Cc
Q 021459 65 EGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLR---GHSDFVFCVNFNPQ---SNLIVSGSF----D----ES 130 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~s~~~----d----g~ 130 (312)
.....++|.|+|+++++ ..++.|++++.. +.+.+..+. ........++++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44678999999985554 566999988743 222222211 11245678999997 445544332 2 56
Q ss_pred EEEEEcCCC--e---EEEE---eee-cCcCeEEEEEccCCCEEEEeeCC-------------CeEEEEeCCCCc------
Q 021459 131 IRIWEVKTG--K---CTRV---IRA-HSMPVTSVHFNRDGSLIVSGSHD-------------GTCKIWDAGEGA------ 182 (312)
Q Consensus 131 i~~wd~~~~--~---~~~~---~~~-~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~------ 182 (312)
|..|+...+ . .... +.. .......++|.|||.++++.+.. |.|.-++....-
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776644 1 1111 221 11124678999999877764432 445555543210
Q ss_pred -eeeEcccCCCCcEEEEEECC-CCCEEEEEecCC---eEEEEEcCCCcE----------------EEEEEccCCceeEEE
Q 021459 183 -CLKTLIDDKDPAVSFAKFSP-NGKFILVGTLDS---TLKLWNYSAGKF----------------LKIYTGHTNKKYCIT 241 (312)
Q Consensus 183 -~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~---~i~v~d~~~~~~----------------~~~~~~~~~~~~~~~ 241 (312)
....+.... ....-++|+| ++.++++-...+ .|.+.. .+.. ...+...........
T Consensus 187 ~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 187 PNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp TTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 000000001 1123466888 566555432221 233321 1110 000110000111222
Q ss_pred EEEE------ccCCcEEEEeecCCeEEEEECCchh-ee--ec-ccCCccceEEEEEcCCCceEEEee
Q 021459 242 STFS------VTNGKYIVSGSEDNCVYVWDLQQKT-MI--QK-LDGHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 242 ~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~--~~-~~~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
..+. ..++.++++.-..+.|...++.... .. .. +.+....+..+++.|+|..+++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 2221 1457777777778889888887532 21 22 222245689999999997666653
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.04 E-value=0.1 Score=42.84 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=69.4
Q ss_pred CceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE--EEe----eeccCCEEEEEEccC---CCeEE
Q 021459 10 KPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALV--HRF----VGHSEGISDLAWSSD---SHYIC 80 (312)
Q Consensus 10 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~ 80 (312)
.+......+...-..-..++|.|+|+++++-...|.|++++..+++.. ..+ .........|+++|+ +..|.
T Consensus 19 ~~~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 19 GSVKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp CCEEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred CCCceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEE
Confidence 344555555555566779999999998888765899999876554432 111 122456789999995 33444
Q ss_pred EE---cCCCeEEEEeCCCC---------cee-eeeee-cccccEEEEEEecCCCEEEEee
Q 021459 81 SA---SDDRTLRIWDARTP---------FDC-LKTLR-GHSDFVFCVNFNPQSNLIVSGS 126 (312)
Q Consensus 81 ~~---~~d~~v~~wd~~~~---------~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
.. ..+..|.-|..... .+. +..+. ........+.|.||+.++++.+
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 32 23445555554331 111 11221 1112345689999998877754
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.99 E-value=0.11 Score=42.63 Aligned_cols=236 Identities=10% Similarity=0.027 Sum_probs=107.3
Q ss_pred CCCEEEEEeCC-CeEEEEeCCC-cceEEEeeecc--CC-EEEEEEccCCCeEEEEcC-C---------CeEEEEeCCCCc
Q 021459 33 DGTLLASASLD-KTVIIWSASS-LALVHRFVGHS--EG-ISDLAWSSDSHYICSASD-D---------RTLRIWDARTPF 97 (312)
Q Consensus 33 ~~~~l~t~~~d-~~i~vw~~~~-~~~~~~~~~~~--~~-v~~~~~~~~~~~l~~~~~-d---------~~v~~wd~~~~~ 97 (312)
++.+.+.||.+ ..+.++|... ......+..-. .. -.+++. -++.+++.|+. + ..+.+||+.+..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 56666666543 4678888763 11222221111 11 112222 25666666665 2 358888887642
Q ss_pred e-eeeeeecccccEEEEEEecCCCEEEEeecC---------------------------------------CcEEEEEcC
Q 021459 98 D-CLKTLRGHSDFVFCVNFNPQSNLIVSGSFD---------------------------------------ESIRIWEVK 137 (312)
Q Consensus 98 ~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------------------g~i~~wd~~ 137 (312)
- .+..+......-.++.. .++++++.|+.+ ..+.+||+.
T Consensus 98 W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred EEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 1 11111101111112222 456777777754 468899998
Q ss_pred CCeEEEEeeecC-cCe-EEEEEccCCCEEEEeeC------CCeEEEEeC--CCCceeeEc-ccCCCCcEEEEEECCCCCE
Q 021459 138 TGKCTRVIRAHS-MPV-TSVHFNRDGSLIVSGSH------DGTCKIWDA--GEGACLKTL-IDDKDPAVSFAKFSPNGKF 206 (312)
Q Consensus 138 ~~~~~~~~~~~~-~~v-~~~~~~~~~~~l~~~~~------d~~i~iwd~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 206 (312)
+.+-...-.... ... .+++. -++++++.|+. ...+..||+ .+.+..... ...........+...+++.
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 875433221111 111 22222 25667777664 335667776 444332211 0111111111112235677
Q ss_pred EEEEecC----------------------CeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCC-----
Q 021459 207 ILVGTLD----------------------STLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDN----- 259 (312)
Q Consensus 207 l~~~~~d----------------------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg----- 259 (312)
++.|+.+ ..+.+||..+.+....-.......... +. ..++++++.|+.++
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~--~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGV-SL--PWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSE-EE--EETTEEEEEEEECGGGCEE
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccce-eE--EeCCEEEEEeeeCCCCCEe
Confidence 7777632 257789988776544322221111111 11 13567778887543
Q ss_pred -eEEEEECCchheeec
Q 021459 260 -CVYVWDLQQKTMIQK 274 (312)
Q Consensus 260 -~i~iwd~~~~~~~~~ 274 (312)
.|.++++.+++.+..
T Consensus 333 ~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEC-CCSCEEE
T ss_pred eeEEEEEEcCcEeEee
Confidence 355557766555433
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.11 Score=42.34 Aligned_cols=190 Identities=12% Similarity=0.077 Sum_probs=99.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCcceEEEeeecc-CCEEEEEEc--c-CCCeEEEE-cCCCeEEEEeCCCCceeeeeeec---
Q 021459 34 GTLLASASLDKTVIIWSASSLALVHRFVGHS-EGISDLAWS--S-DSHYICSA-SDDRTLRIWDARTPFDCLKTLRG--- 105 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~--~-~~~~l~~~-~~d~~v~~wd~~~~~~~~~~~~~--- 105 (312)
+.+++.++.||.|.-.|..+++.+.++.... .++....-. + ++..++.. ..||.|..++..++.... ...-
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~-~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL-PLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE-EEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe-eeccccc
Confidence 3468888999999999999999888776431 122211100 1 22333333 589999999987653321 1110
Q ss_pred -ccccEEE---EEE-e----cCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCc--C-----eEEEEEc-----cCCCEE
Q 021459 106 -HSDFVFC---VNF-N----PQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSM--P-----VTSVHFN-----RDGSLI 164 (312)
Q Consensus 106 -~~~~v~~---~~~-~----~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~--~-----v~~~~~~-----~~~~~l 164 (312)
...++.. ... . ..+..+++++.+|.+...|+++|+.+..+..... . ..|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1111111 000 0 1456789999999999999999998877753210 0 0011110 123456
Q ss_pred EEeeCCCeEEEEeCCCCceeeEc--ccCCCCcEE-----EEEECCCCCEEEEEecCCeEEEEEcCCCcEE
Q 021459 165 VSGSHDGTCKIWDAGEGACLKTL--IDDKDPAVS-----FAKFSPNGKFILVGTLDSTLKLWNYSAGKFL 227 (312)
Q Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 227 (312)
+.+..+..+.+.+ ++++ .-.+ .......+. .-..+.++.+ ++++.||.|.-+|..+|+.+
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEE
Confidence 6666666666655 3332 1000 000000000 0000123454 44677888888888777754
No 322
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.97 E-value=0.12 Score=42.56 Aligned_cols=154 Identities=11% Similarity=0.151 Sum_probs=85.4
Q ss_pred CEEEEEEccCCCeEEEE------------cCCCeEEEEeCCCCceeee--eeec-----ccccEEEEEEec--CCC-EEE
Q 021459 66 GISDLAWSSDSHYICSA------------SDDRTLRIWDARTPFDCLK--TLRG-----HSDFVFCVNFNP--QSN-LIV 123 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~------------~~d~~v~~wd~~~~~~~~~--~~~~-----~~~~v~~~~~~~--~~~-~l~ 123 (312)
...+++..|+|..++++ ..+|.|.++|..++..... .+.+ ..-.-.-+.+.+ +++ .|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34466677776554444 2688999999874211111 1222 112345566555 454 344
Q ss_pred Eee-c--CCcEEEEEcCCC-eEEE---Eeeec-CcCeEEEEEccCCCEEEEee-----------------CCCeEEEEeC
Q 021459 124 SGS-F--DESIRIWEVKTG-KCTR---VIRAH-SMPVTSVHFNRDGSLIVSGS-----------------HDGTCKIWDA 178 (312)
Q Consensus 124 s~~-~--dg~i~~wd~~~~-~~~~---~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~ 178 (312)
.+. . +.+|.+|++..+ .... .+... -...+.+.+.++|.+.++.. ..|.+.-+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 442 2 457888877543 2222 22221 13468899999998777653 1245555655
Q ss_pred CCCceeeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCC
Q 021459 179 GEGACLKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSA 223 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~ 223 (312)
. + ...... .-....-++|+||++.|.++ +..+.|..|++..
T Consensus 211 ~--~-~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 N--D-VRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--C-CEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C--e-EEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 3 2 222211 12234567899999887776 4578999999864
No 323
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.93 E-value=0.12 Score=41.80 Aligned_cols=224 Identities=11% Similarity=0.120 Sum_probs=106.7
Q ss_pred EEEEEeCCCeEEEEeCCCcceEEE-eeeccCCEEEEEEccCCCeEEEEcC----CC-------eEEEEeCCCCce-eeee
Q 021459 36 LLASASLDKTVIIWSASSLALVHR-FVGHSEGISDLAWSSDSHYICSASD----DR-------TLRIWDARTPFD-CLKT 102 (312)
Q Consensus 36 ~l~t~~~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~v~~wd~~~~~~-~~~~ 102 (312)
+++.|+. .+.+||..+.+-... ..........-+...++.+++.|+. ++ .+..||..+..- .+..
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 478888877654321 1110111122223446777777773 11 267788765321 1111
Q ss_pred eecccccEEEEEEecCCCEEEEeecC-------CcEEEEEcCCCeEEEEeeecCcC-eEEEEEccCCCEEEEeeC-----
Q 021459 103 LRGHSDFVFCVNFNPQSNLIVSGSFD-------ESIRIWEVKTGKCTRVIRAHSMP-VTSVHFNRDGSLIVSGSH----- 169 (312)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~----- 169 (312)
+...... .++.. -++..++.|+.+ ..+.+||+.+.+-...-...... -.+++. .++++++.|+.
T Consensus 96 ~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSC
T ss_pred CCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCC
Confidence 1111111 11211 256677777754 24788898877543321111000 012222 46777777764
Q ss_pred -CCeEEEEeCCCCceeeEcc-cCCCCcEEEEEECCCCCEEEEEecC-----CeEEEEEcCCCcEEEEEEccCCceeEEEE
Q 021459 170 -DGTCKIWDAGEGACLKTLI-DDKDPAVSFAKFSPNGKFILVGTLD-----STLKLWNYSAGKFLKIYTGHTNKKYCITS 242 (312)
Q Consensus 170 -d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
...+.+||+.+.+...... .........+. -+++.++.|+.+ ..+.+||..+.+....-...... .....
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~ 249 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-SSISL 249 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC-BSCEE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc-cceEE
Confidence 2358899998776433211 11111112222 256777777643 35778998877654432111111 11111
Q ss_pred EEEccCCcEEEEeecC--------------CeEEEEECCch
Q 021459 243 TFSVTNGKYIVSGSED--------------NCVYVWDLQQK 269 (312)
Q Consensus 243 ~~~~~~~~~l~~~~~d--------------g~i~iwd~~~~ 269 (312)
. ..++++++.|+.+ ..+.+||+.+.
T Consensus 250 ~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 250 V--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp E--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred E--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 1 1356777777654 34677777654
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.92 E-value=0.17 Score=49.16 Aligned_cols=234 Identities=12% Similarity=0.190 Sum_probs=123.6
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecc---
Q 021459 30 FSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGH--- 106 (312)
Q Consensus 30 ~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~--- 106 (312)
.+|..+.||-- ....+.|+|+++...+....- ...|.-=.|-.+..+-++ .+..|+.|++.....+.+.+..|
T Consensus 73 MnP~~~iiALr-ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lV--T~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 73 MNPASKVIALK-AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALV--TDNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred cCCCcceEEEe-cCCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEE--cCCeEEEeccCCCCccHHHHhcchhc
Confidence 45656655543 367899999988766554433 345554566555443333 25689999996533344433333
Q ss_pred -cccEEEEEEecCCCEEEEee-------cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEc--cC-CCEEEEeeC---CCe
Q 021459 107 -SDFVFCVNFNPQSNLIVSGS-------FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFN--RD-GSLIVSGSH---DGT 172 (312)
Q Consensus 107 -~~~v~~~~~~~~~~~l~s~~-------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~~~---d~~ 172 (312)
...|..-.-+++.++++..| -.|.+.+|..+.+. .+.+.+|......+... +. ..++.-+.. .+.
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 23344455577777765433 34788999877553 33445554333222221 11 112222211 267
Q ss_pred EEEEeCCCC---c--eeeE----cccC---CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEE
Q 021459 173 CKIWDAGEG---A--CLKT----LIDD---KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCI 240 (312)
Q Consensus 173 i~iwd~~~~---~--~~~~----~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~ 240 (312)
+.+.++... . ..+. +... .+-++ .+..++.-..+..-+.-|.+++||+.++..+..-.-...... +
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF-~ 305 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF-V 305 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcce-EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceE-E
Confidence 888887542 1 0000 0000 11122 244677777788888999999999999987643322222211 1
Q ss_pred EEEEEccCCcEEEEeecCCeEEEEECCchhee
Q 021459 241 TSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI 272 (312)
Q Consensus 241 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (312)
+ +...+.+ =++.....|.|.--.+.....+
T Consensus 306 ~-~~~~~~~-g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 306 T-APHEATA-GIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred e-ccCCCCC-ceEEEcCCceEEEEEEccchhh
Confidence 1 1121222 3444557777766666554433
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.90 E-value=0.15 Score=42.76 Aligned_cols=110 Identities=18% Similarity=0.110 Sum_probs=73.8
Q ss_pred cEEEEEEecCCCEEEEeecCCcEEEEEcCCCe------------EEEEeee------cCcCeEEEEEccC---CCEEEEe
Q 021459 109 FVFCVNFNPQSNLIVSGSFDESIRIWEVKTGK------------CTRVIRA------HSMPVTSVHFNRD---GSLIVSG 167 (312)
Q Consensus 109 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~------------~~~~~~~------~~~~v~~~~~~~~---~~~l~~~ 167 (312)
.+..+..+|+|++|+..+. ..|.+-.+..+. ..+.+.. ...+|..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4677889999999888764 468888876321 1122222 2467999999994 5689999
Q ss_pred eCCCeEEEEeCCCCce-eeEcc--------cCCCCcEEEEEECCCCCEEEEEe--cCCeEEEE
Q 021459 168 SHDGTCKIWDAGEGAC-LKTLI--------DDKDPAVSFAKFSPNGKFILVGT--LDSTLKLW 219 (312)
Q Consensus 168 ~~d~~i~iwd~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~v~ 219 (312)
..|+.|++||+..... ...+. ......+..++|+.++-.|.+.+ ..|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999976221 00110 11124567788999887777654 77887654
No 326
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.87 E-value=0.25 Score=44.81 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=100.7
Q ss_pred cCCCeEEEEcCC----CeEEEEeCCCCce-eee-e-----eecccccEEEEEEec-CCCEEEEeecCC------cEEEEE
Q 021459 74 SDSHYICSASDD----RTLRIWDARTPFD-CLK-T-----LRGHSDFVFCVNFNP-QSNLIVSGSFDE------SIRIWE 135 (312)
Q Consensus 74 ~~~~~l~~~~~d----~~v~~wd~~~~~~-~~~-~-----~~~~~~~v~~~~~~~-~~~~l~s~~~dg------~i~~wd 135 (312)
.++.+++.|+.+ ..+.+||..+..- .+. . +.. ...-.+++..+ ++..++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 456666666643 3577888765421 111 1 111 11112233333 677788887543 578899
Q ss_pred cCCCeEEEEeeecC-cCeEEEEEccCCCEEEEeeCCC--eEEEEeCCCCceeeEcc----cCCCCcEEEEEECCC-CCEE
Q 021459 136 VKTGKCTRVIRAHS-MPVTSVHFNRDGSLIVSGSHDG--TCKIWDAGEGACLKTLI----DDKDPAVSFAKFSPN-GKFI 207 (312)
Q Consensus 136 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~l 207 (312)
+.+.+-...-.... ..-.+++...++++++.|+.++ .+.+||+.+........ .........+.+..+ +..+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 88765432211111 1112233324788888887655 68999998876443211 111111222334444 6677
Q ss_pred EEEec--C-----CeEEEEEcCCCc------EEEEEEccCCceeEEEEEEEccCCcEEEEeec--------CCeEEEEEC
Q 021459 208 LVGTL--D-----STLKLWNYSAGK------FLKIYTGHTNKKYCITSTFSVTNGKYIVSGSE--------DNCVYVWDL 266 (312)
Q Consensus 208 ~~~~~--d-----~~i~v~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------dg~i~iwd~ 266 (312)
+.|+. + +.+.+||+.+.. .................. ...++++++.|+. ...|.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 77765 2 468899998877 333322111111111111 1123677777774 345899998
Q ss_pred Cchh
Q 021459 267 QQKT 270 (312)
Q Consensus 267 ~~~~ 270 (312)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7653
No 327
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.17 Score=42.38 Aligned_cols=144 Identities=16% Similarity=0.228 Sum_probs=90.7
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCcceEEEeeec----cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce--------
Q 021459 31 SNDGTLLASASLDKTVIIWSASSLALVHRFVGH----SEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-------- 98 (312)
Q Consensus 31 s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-------- 98 (312)
+.+|..++.+- ++.||.-++.....-+.+... -..|..+..+|+|++||..+ +..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34566665553 367887776643322222221 22578899999999999875 56788887752210
Q ss_pred ---eeeeeec------ccccEEEEEEecC---CCEEEEeecCCcEEEEEcCCCeE-EEEee---------ecCcCeEEEE
Q 021459 99 ---CLKTLRG------HSDFVFCVNFNPQ---SNLIVSGSFDESIRIWEVKTGKC-TRVIR---------AHSMPVTSVH 156 (312)
Q Consensus 99 ---~~~~~~~------~~~~v~~~~~~~~---~~~l~s~~~dg~i~~wd~~~~~~-~~~~~---------~~~~~v~~~~ 156 (312)
..+.+.- ....|..+.|+|- +..|++-..|+.|++||+..... ...+. .....+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 0112211 2457999999995 45888999999999999975211 11221 1114578999
Q ss_pred EccCCCEEEEee--CCCeEEEE
Q 021459 157 FNRDGSLIVSGS--HDGTCKIW 176 (312)
Q Consensus 157 ~~~~~~~l~~~~--~d~~i~iw 176 (312)
|.+++-.|...+ ..|.|.-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887666644 77887643
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.81 E-value=0.36 Score=46.97 Aligned_cols=234 Identities=11% Similarity=0.164 Sum_probs=118.8
Q ss_pred CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEE
Q 021459 44 KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV 123 (312)
Q Consensus 44 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 123 (312)
..|.|-|+.+.....+. +-.--+.-.+|..+.+|-- ...++.++|+++. ..++...-. ..|.--.|-.+... +
T Consensus 48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k-~klks~~~~-e~VvfWkWis~~~l-~ 120 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALK-AGKTLQIFNIEMK-SKMKAHTMT-DDVTFWKWISLNTV-A 120 (1630)
T ss_pred ceEEEEECCCCCCcccc---cccchhhccCCCcceEEEe-cCCeEEEeehHHh-hhhcccccC-CCceEEEecCCCee-E
Confidence 36777777765433211 1112234467777766654 3678999999874 234333322 34555566544433 2
Q ss_pred EeecCCcEEEEEcCCC-eEEEEeeec----CcCeEEEEEccCCCEEEEee-------CCCeEEEEeCCCCceeeEcccCC
Q 021459 124 SGSFDESIRIWEVKTG-KCTRVIRAH----SMPVTSVHFNRDGSLIVSGS-------HDGTCKIWDAGEGACLKTLIDDK 191 (312)
Q Consensus 124 s~~~dg~i~~wd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~ 191 (312)
-.+ +..|+-|++... .+.+.+..| ...|..-..+++.++++..+ -.|.+.+|....+.. +....+
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--Q~iegh 197 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGH 197 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--hhhhHh
Confidence 222 457999999642 333344333 34577777788888776433 347788887654322 111111
Q ss_pred CCcEEEEEE---CCCCCEEEEEec---CCeEEEEEcCCC---c--E----EEEEEcc-CCceeEEEEEEEccCCcEEEEe
Q 021459 192 DPAVSFAKF---SPNGKFILVGTL---DSTLKLWNYSAG---K--F----LKIYTGH-TNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 192 ~~~~~~~~~---~~~~~~l~~~~~---d~~i~v~d~~~~---~--~----~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
......... .+....+..+.. .+.++|-++... . . +.++... ......+....+ +.-..+...
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs-~k~g~iy~i 276 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLI 276 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEec-cccCEEEEE
Confidence 111111111 011112222211 257788776432 1 0 1111111 111223333333 344567778
Q ss_pred ecCCeEEEEECCchheeecccCCccceEEEEEc
Q 021459 256 SEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCH 288 (312)
Q Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 288 (312)
+.-|.|++||+.++..+..-+-....|...+-+
T Consensus 277 tk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 277 TKYGYIHLYDLETGTCIYMNRISGETIFVTAPH 309 (1630)
T ss_pred ecCceEEEEecccchhhhhccccCCceEEeccC
Confidence 899999999999988765544334444444333
No 329
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.74 E-value=0.29 Score=43.76 Aligned_cols=205 Identities=10% Similarity=-0.012 Sum_probs=113.9
Q ss_pred cceEEEEECCCCCEEEEEe-CCCeEEEEeCCCcceEEEeee------ccCCEEEEEEccCCCeEE-EEcCCCeEEEEeCC
Q 021459 23 RAVSCVKFSNDGTLLASAS-LDKTVIIWSASSLALVHRFVG------HSEGISDLAWSSDSHYIC-SASDDRTLRIWDAR 94 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~-~d~~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~~d~~v~~wd~~ 94 (312)
..+.+++|.+.++.|.-+. ..+.|+.++.........+.. ....+..+++...+..|. +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 4577899998766665554 467888887765432222221 234678999998766554 55667789898886
Q ss_pred CCceeeeeeecccccEEEEEEecCCCEEEEeec-CC--cEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe-eCC
Q 021459 95 TPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF-DE--SIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG-SHD 170 (312)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg--~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 170 (312)
... ...........-..++++|....++.... .. .|...++............-.....+++++++..|..+ +..
T Consensus 420 G~~-~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~ 498 (628)
T 4a0p_A 420 GRS-VGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDL 498 (628)
T ss_dssp SCE-EEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCe-EEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCC
Confidence 432 11222233345778999995444443333 22 46666664332222222222346889999876666544 456
Q ss_pred CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEE
Q 021459 171 GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIY 230 (312)
Q Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 230 (312)
+.|...++.. ...+.+..........++... +..+.+=...+.|...|..+++....+
T Consensus 499 ~~I~~~~~dG-~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 499 RRIESSDLSG-ANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp TEEEEEETTS-CSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred CEEEEEeCCC-CceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 7898898854 333333322222223333332 333333344566777776666544433
No 330
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.62 E-value=0.23 Score=40.87 Aligned_cols=204 Identities=10% Similarity=0.106 Sum_probs=114.0
Q ss_pred ceeeecccccceEEEEECCCCCEEEEEe------------CCCeEEEEeCCC--cce-EEEeee-----ccCCEEEEEEc
Q 021459 14 HFKTLTAHSRAVSCVKFSNDGTLLASAS------------LDKTVIIWSASS--LAL-VHRFVG-----HSEGISDLAWS 73 (312)
Q Consensus 14 ~~~~~~~h~~~v~~~~~s~~~~~l~t~~------------~d~~i~vw~~~~--~~~-~~~~~~-----~~~~v~~~~~~ 73 (312)
.++.+.+-......+...|+|..+++++ .+|.|.++|..+ .+. ...+.+ .......+.+.
T Consensus 41 ~C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~ 120 (355)
T 3sre_A 41 NCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTF 120 (355)
T ss_dssp CEEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEE
T ss_pred CCEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEE
Confidence 4555555444566777889876555542 689999999873 222 112222 12356677776
Q ss_pred c--CCC-eEEEEcC---CCeEEEEeCCCCce---eeeeeecc-cccEEEEEEecCCCEEEEee-----------------
Q 021459 74 S--DSH-YICSASD---DRTLRIWDARTPFD---CLKTLRGH-SDFVFCVNFNPQSNLIVSGS----------------- 126 (312)
Q Consensus 74 ~--~~~-~l~~~~~---d~~v~~wd~~~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l~s~~----------------- 126 (312)
+ ++. +|+.+.. +..+.+|++..... .+..+.+. -.....+...+++.+.++..
T Consensus 121 ~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 121 IDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp ECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred ECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccC
Confidence 5 454 4555522 45677776543211 22333322 23467888899988777653
Q ss_pred cCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEe-eCCCeEEEEeCCC-Ccee-eEcccCCCCcEEEEEECC-
Q 021459 127 FDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSG-SHDGTCKIWDAGE-GACL-KTLIDDKDPAVSFAKFSP- 202 (312)
Q Consensus 127 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~- 202 (312)
..|.|..+|. ++...... .-...+.++|+||++.+..+ +..+.|..|++.. +... .+.. ........+++++
T Consensus 201 ~~g~vyr~d~--~~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e 276 (355)
T 3sre_A 201 AWSFVTYYSP--NDVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPV 276 (355)
T ss_dssp CCEEEEEECT--TCCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTT
T ss_pred CccEEEEEEC--CeEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCC
Confidence 1244555554 33222222 22346899999999877655 4567899998753 3221 1122 2234456677888
Q ss_pred CCCEEEEEecC-CeEEEEEc
Q 021459 203 NGKFILVGTLD-STLKLWNY 221 (312)
Q Consensus 203 ~~~~l~~~~~d-~~i~v~d~ 221 (312)
+|++.+++..+ +.|..|+.
T Consensus 277 ~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 277 TGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp TCCEEEEEESCHHHHHSCCT
T ss_pred CCcEEEEecCCceEEEEECC
Confidence 58877765433 23433443
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.57 E-value=0.034 Score=42.13 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=62.9
Q ss_pred ccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEE------EEeee-cCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCC
Q 021459 108 DFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCT------RVIRA-HSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGE 180 (312)
Q Consensus 108 ~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~------~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (312)
..+..++|+|++.+.+. .+|.++-.+..+.+.. ..+-. --..-..+.|.|+|.+.++ .||.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35678999998886666 6777666665442111 11100 0011367899999987777 569988887643
Q ss_pred Cceee-----Ecc-cCCCCcEEEEEECCCCCEEEEEecCCeEEE
Q 021459 181 GACLK-----TLI-DDKDPAVSFAKFSPNGKFILVGTLDSTLKL 218 (312)
Q Consensus 181 ~~~~~-----~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v 218 (312)
..... ... ...-..+..+.++|+|.+.++. |+.++-
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 22110 111 1111346788899999887776 777543
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.55 E-value=0.3 Score=44.31 Aligned_cols=154 Identities=12% Similarity=0.148 Sum_probs=82.1
Q ss_pred cCCCEEEEeecC----CcEEEEEcCCCeEEEEe-e------ecCcCeEEEEEcc-CCCEEEEeeCCC------eEEEEeC
Q 021459 117 PQSNLIVSGSFD----ESIRIWEVKTGKCTRVI-R------AHSMPVTSVHFNR-DGSLIVSGSHDG------TCKIWDA 178 (312)
Q Consensus 117 ~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d~------~i~iwd~ 178 (312)
.++..++.|+.+ ..+.+||..+++-...- . .....-.+++..+ ++++++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777754 45888998877543322 1 0111112333333 777888877543 4778898
Q ss_pred CCCceeeEcccCCCCcEEEEEECCCCCEEEEEecCC--eEEEEEcCCCcEEEEEEc--cCCceeEEE-EEEEccCCcEEE
Q 021459 179 GEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDS--TLKLWNYSAGKFLKIYTG--HTNKKYCIT-STFSVTNGKYIV 253 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~l~ 253 (312)
.+.+....-.......-..++.-.++..++.|+.++ .+.+||..+......-.. ......... .......+++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 876543221101111111222324778888887654 689999988776443210 010111111 122222266777
Q ss_pred Eeec--C-----CeEEEEECCchh
Q 021459 254 SGSE--D-----NCVYVWDLQQKT 270 (312)
Q Consensus 254 ~~~~--d-----g~i~iwd~~~~~ 270 (312)
.|+. + ..+..||+.+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7765 2 468899987655
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.54 E-value=0.32 Score=41.59 Aligned_cols=105 Identities=10% Similarity=0.117 Sum_probs=60.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE--EEeee------ccCCEEEEEEccC---CCeEEEEcC-------
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALV--HRFVG------HSEGISDLAWSSD---SHYICSASD------- 84 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------- 84 (312)
..-..++|.|+|+++++-...+.|++++..++... ..+.. .......|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 34568999999998887655457888876544332 22211 2356779999995 444444332
Q ss_pred ------CCeEEEEeCCCC------cee-eeeee-cccccEEEEEEecCCCEEEEeec
Q 021459 85 ------DRTLRIWDARTP------FDC-LKTLR-GHSDFVFCVNFNPQSNLIVSGSF 127 (312)
Q Consensus 85 ------d~~v~~wd~~~~------~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~ 127 (312)
...|.-++.... .+. +..+. ........+.|.||+.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124444543221 111 11121 11234678999999998777553
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.42 E-value=0.31 Score=40.11 Aligned_cols=104 Identities=19% Similarity=0.167 Sum_probs=57.0
Q ss_pred CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce-eeeee----ecccccEEEEEEecC---CCEEEEee-c-------C
Q 021459 65 EGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-CLKTL----RGHSDFVFCVNFNPQ---SNLIVSGS-F-------D 128 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-~~~~~----~~~~~~v~~~~~~~~---~~~l~s~~-~-------d 128 (312)
.....|+|.|+|+.|+++...|.|++++...... .+..+ .........++++|+ +..|+... . .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3467899999998344455679999988532111 11111 111234578999996 44444432 2 2
Q ss_pred CcEEEEEcCCC--e--EEE-Eeeec------CcCeEEEEEccCCCEEEEee
Q 021459 129 ESIRIWEVKTG--K--CTR-VIRAH------SMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 129 g~i~~wd~~~~--~--~~~-~~~~~------~~~v~~~~~~~~~~~l~~~~ 168 (312)
..|..+++..+ + ..+ .+... ......+.|.|||.+.++.+
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 35666666433 1 111 11111 11235799999997666643
No 335
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.41 E-value=0.31 Score=40.10 Aligned_cols=143 Identities=13% Similarity=0.140 Sum_probs=78.1
Q ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcc-eEEEee---eccCCEEEEEEccC---CCeEEEEcC----C----C
Q 021459 22 SRAVSCVKFSNDGTLLASASLDKTVIIWSASSLA-LVHRFV---GHSEGISDLAWSSD---SHYICSASD----D----R 86 (312)
Q Consensus 22 ~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 86 (312)
-..-..++|.|+|+++++ ..+|.|++++. +++ .+..+. ........|+++|+ +..|..+.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345678999999986655 55689998873 343 222111 11346789999997 445544432 2 4
Q ss_pred eEEEEeCCCC------ceee-eeeec-ccccEEEEEEecCCCEEEEeecC-------------CcEEEEEcCCCe-----
Q 021459 87 TLRIWDARTP------FDCL-KTLRG-HSDFVFCVNFNPQSNLIVSGSFD-------------ESIRIWEVKTGK----- 140 (312)
Q Consensus 87 ~v~~wd~~~~------~~~~-~~~~~-~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~----- 140 (312)
.|..|+.... .+.+ ..+.. .......+.|.||+.++++.+.. |.|..++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 5667765432 1111 11221 11123568899999877775432 345555543210
Q ss_pred --EEEEe-eecCcCeEEEEEcc-CCCEEEEe
Q 021459 141 --CTRVI-RAHSMPVTSVHFNR-DGSLIVSG 167 (312)
Q Consensus 141 --~~~~~-~~~~~~v~~~~~~~-~~~~l~~~ 167 (312)
....+ .++. ....++|+| +++++++-
T Consensus 186 f~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 01111 1232 246789999 67766553
No 336
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.29 E-value=0.37 Score=39.64 Aligned_cols=142 Identities=11% Similarity=0.111 Sum_probs=74.7
Q ss_pred cceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcc--eEEEe----eeccCCEEEEEEccC---CCeEEEEc-C-------
Q 021459 23 RAVSCVKFSNDGT-LLASASLDKTVIIWSASSLA--LVHRF----VGHSEGISDLAWSSD---SHYICSAS-D------- 84 (312)
Q Consensus 23 ~~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~--~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~------- 84 (312)
..-..++|.|+|+ ++++ ...|.|++++..... .+..+ .........|+++|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3457899999999 6655 567899998754221 11111 112345788999996 44444432 2
Q ss_pred CCeEEEEeCCCC------ceee-eeee---cccccEEEEEEecCCCEEEEeecC-------------CcEEEEEcCCCe-
Q 021459 85 DRTLRIWDARTP------FDCL-KTLR---GHSDFVFCVNFNPQSNLIVSGSFD-------------ESIRIWEVKTGK- 140 (312)
Q Consensus 85 d~~v~~wd~~~~------~~~~-~~~~---~~~~~v~~~~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~- 140 (312)
...|..++.... .+.+ ..+. .....-..+.|.||+.++++.+.. |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 124555555321 1111 1111 111123468999999766664332 456666654210
Q ss_pred -----------EEEEee-ecCcCeEEEEEcc-CCCEEEE
Q 021459 141 -----------CTRVIR-AHSMPVTSVHFNR-DGSLIVS 166 (312)
Q Consensus 141 -----------~~~~~~-~~~~~v~~~~~~~-~~~~l~~ 166 (312)
....+. ++. ....++|+| +++++++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 111121 222 357899999 6665554
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.04 E-value=0.46 Score=38.42 Aligned_cols=234 Identities=12% Similarity=0.184 Sum_probs=131.7
Q ss_pred CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEE
Q 021459 44 KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV 123 (312)
Q Consensus 44 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 123 (312)
..+.+-|+.+.....+.. -...+.-.+|..+.+|--. ...+.++|+++. ..++...-. ..|.--.|-.+..+ +
T Consensus 49 ~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK-~klks~~~~-e~VvfWkWis~~~L-~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMK-SKMKAHTMT-DDVTFWKWISLNTV-A 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTT-EEEEEEECS-SCEEEEEECSSSEE-E
T ss_pred CEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHh-hhhcceecC-CccEEEEecCCCeE-E
Confidence 467777887755432211 1122455688888777654 678999999985 445544433 45656667554433 3
Q ss_pred EeecCCcEEEEEcCCC-eEEEEeeecC----cCeEEEEEccCCCEEEEeeC-------CCeEEEEeCCCCceeeEcccCC
Q 021459 124 SGSFDESIRIWEVKTG-KCTRVIRAHS----MPVTSVHFNRDGSLIVSGSH-------DGTCKIWDAGEGACLKTLIDDK 191 (312)
Q Consensus 124 s~~~dg~i~~wd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~ 191 (312)
-.. +..|+-|++... .+.+.+..|. ..|..-..+++.++++..+- .|.+.+|....+.. +....+
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--Q~ieGh 198 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGH 198 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE--EEECCS
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc--ceeeee
Confidence 322 457999998743 4455555443 45677777888887765432 36678888765432 222222
Q ss_pred CCcEEEEEECCCCC-----EEEEEec---CCeEEEEEcCCC---c------EEEEEE-ccCCceeEEEEEEEccCCcEEE
Q 021459 192 DPAVSFAKFSPNGK-----FILVGTL---DSTLKLWNYSAG---K------FLKIYT-GHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 192 ~~~~~~~~~~~~~~-----~l~~~~~---d~~i~v~d~~~~---~------~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
. ..+..+-.+|. .++.+.. .+.+++.++... . .+..+. ........+....+ +.-..+.
T Consensus 199 a--a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs-~kygviy 275 (365)
T 2xzh_A 199 A--ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVF 275 (365)
T ss_dssp E--EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEE-TTTTEEE
T ss_pred e--eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEec-ccCCEEE
Confidence 2 22233322222 2332322 257888887332 1 111111 11122344544444 3455778
Q ss_pred EeecCCeEEEEECCchheeecccCCccceEEEEEcCC
Q 021459 254 SGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPT 290 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~ 290 (312)
.-+.-|.|++||++++.++..-+-..+.|..-+.+..
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 312 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGG
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCC
Confidence 8889999999999999887665544555554444433
No 338
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.81 E-value=0.73 Score=38.87 Aligned_cols=242 Identities=12% Similarity=0.177 Sum_probs=134.6
Q ss_pred CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEE
Q 021459 44 KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIV 123 (312)
Q Consensus 44 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 123 (312)
..+.|-|+.+.....+.. -.-.+.-.+|..+.+|--. ...+.++|+++. ..++...-.. .|.--.|-.+. .|+
T Consensus 48 ~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K-~klks~~~~e-~VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMK-SKMKAHTMTD-DVTFWKWISLN-TVA 120 (494)
T ss_dssp CEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTT-EEEEEEECSS-CCCEEEEEETT-EEE
T ss_pred CeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHh-hhhcceecCC-CceEEEecCCC-eEE
Confidence 467777877754432211 1122455788887776554 679999999885 4455444333 34445565443 333
Q ss_pred EeecCCcEEEEEcCCC-eEEEEeeec----CcCeEEEEEccCCCEEEEeeC-------CCeEEEEeCCCCceeeEcccCC
Q 021459 124 SGSFDESIRIWEVKTG-KCTRVIRAH----SMPVTSVHFNRDGSLIVSGSH-------DGTCKIWDAGEGACLKTLIDDK 191 (312)
Q Consensus 124 s~~~dg~i~~wd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~ 191 (312)
-.+ +..|+-|++... .+.+.+..| ...|..-..+++.++++..+- .|.+.+|....+.. +....+
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--Q~ieGh 197 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGH 197 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE--EEECCS
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc--chheee
Confidence 332 457999999643 345555544 345777777888888775432 36778888765432 222222
Q ss_pred CCcEEEEEECCCC-----CEEEEEec---CCeEEEEEcCCC--------cE-EEEE-EccCCceeEEEEEEEccCCcEEE
Q 021459 192 DPAVSFAKFSPNG-----KFILVGTL---DSTLKLWNYSAG--------KF-LKIY-TGHTNKKYCITSTFSVTNGKYIV 253 (312)
Q Consensus 192 ~~~~~~~~~~~~~-----~~l~~~~~---d~~i~v~d~~~~--------~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
. ..+..+-.+| ..++.+.. .+.+++.++... +. +..+ .........+....+ +.-..+.
T Consensus 198 a--a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs-~kygviy 274 (494)
T 1bpo_A 198 A--ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVF 274 (494)
T ss_dssp E--EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE-TTTTEEE
T ss_pred e--eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec-ccCCEEE
Confidence 2 2222222222 12333322 267888887432 11 1111 111122344554444 4455777
Q ss_pred EeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEee
Q 021459 254 SGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
.-+.-|.|++||++++..+..-+-..+.|..-+.+....-++...
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn 319 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN 319 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred EEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc
Confidence 888999999999999988766554455555555544433343333
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.48 E-value=0.76 Score=36.84 Aligned_cols=175 Identities=7% Similarity=0.004 Sum_probs=96.2
Q ss_pred EECCCCCEEEEEeCC--------------CeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEc--CCC--eEEE
Q 021459 29 KFSNDGTLLASASLD--------------KTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSAS--DDR--TLRI 90 (312)
Q Consensus 29 ~~s~~~~~l~t~~~d--------------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~--~v~~ 90 (312)
-++++++.|+-+... ..|+..+....+... +. ... ...|+++++.|+-.. .++ .|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PDP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CSC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cCC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 357888888766542 356777776654322 21 111 236788888888765 333 4545
Q ss_pred EeCCCCceeeeeeecccccEEEEEEecCCCEEEEeec-CCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeC
Q 021459 91 WDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSF-DESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSH 169 (312)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
.++.... ...+..+.. ..++++++.|+-.+. ...|.+.++..+.....+. .... ..+.|++.+|+-...
T Consensus 134 ~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 134 IRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEG
T ss_pred EECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEc
Confidence 5554321 223332322 345777877775554 5778888887665444332 2222 235688887775543
Q ss_pred C--CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec--CCeEEEEEcCCC
Q 021459 170 D--GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL--DSTLKLWNYSAG 224 (312)
Q Consensus 170 d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~ 224 (312)
. ..|..-++.... ...+.. ..+ ..++|++++|..+.. .+.|..-++...
T Consensus 204 ~~~~~I~~~~ldG~~-~~~Lt~---~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 204 NRDNAIVHVNINNPN-PVVLTE---ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp GGTTEEEEECSSSCC-CEECSC---SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCcEEEEEECCCCC-eEEEeC---CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 3 356666665433 222221 112 347888888876532 356666666443
No 340
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.21 E-value=2.4 Score=40.94 Aligned_cols=243 Identities=12% Similarity=0.122 Sum_probs=120.6
Q ss_pred EEEEeCCCcceEEEeeec-cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCc-eeeeeeecccccEEEEEEecC-----
Q 021459 46 VIIWSASSLALVHRFVGH-SEGISDLAWSSDSHYICSASDDRTLRIWDARTPF-DCLKTLRGHSDFVFCVNFNPQ----- 118 (312)
Q Consensus 46 i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~-~~~~~~~~~~~~v~~~~~~~~----- 118 (312)
|++.+......+..+... ...|...+.+ +..++.++ .+.+.++++..+. ..... ..-...|.|+++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTT
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcc
Confidence 444444433444444322 2345555543 23555554 5677777765431 11111 122457999998763
Q ss_pred -CCEEEEeec-CCcEEEEEcCCCeEEEEeeec-CcCeEEEEEc--cCCCEEEEeeCCCeEEEE--eCCCCceee---Ecc
Q 021459 119 -SNLIVSGSF-DESIRIWEVKTGKCTRVIRAH-SMPVTSVHFN--RDGSLIVSGSHDGTCKIW--DAGEGACLK---TLI 188 (312)
Q Consensus 119 -~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~d~~i~iw--d~~~~~~~~---~~~ 188 (312)
+.+++.|.+ |++|+++++...+.+....-. .....++.+. ....++..|-.||.+.-+ |..++.... ...
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~L 649 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTL 649 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEEC
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEc
Confidence 368888887 999999999876554332211 1233333332 233578889999987554 444444332 223
Q ss_pred cCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccC-CcEEEEeecCCeEEEEECC
Q 021459 189 DDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTN-GKYIVSGSEDNCVYVWDLQ 267 (312)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 267 (312)
+. ..+....+...+..-+.+..+....++-. .++.... .-.......+ +.|.... .+-++..+ ++.++|..+.
T Consensus 650 G~--~pv~L~~~~~~~~~~V~a~s~rp~liy~~-~~~l~~s-~l~~~~v~~~-~~F~se~~~~g~v~~~-~~~LrI~~i~ 723 (1158)
T 3ei3_A 650 GT--QPTVLRTFRSLSTTNVFACSDRPTVIYSS-NHKLVFS-NVNLKEVNYM-CPLNSDGYPDSLALAN-NSTLTIGTID 723 (1158)
T ss_dssp CS--SCCEEEEEESSSCEEEEEESSSCEEEEES-SSSEEEE-EBSSSCCCEE-EEECCSSSTTEEEEEC-SSCEEEEEEC
T ss_pred CC--CceEEEEEeeCCceeEEEECCCCEEEEEc-CCceEEe-ccChHHhceE-eccCcccCCCcEEEEc-CCceEEEEec
Confidence 32 22333334434433333333444444433 2332211 1111111111 1222221 23344333 4458888775
Q ss_pred chhe--eecccCCccceEEEEEcCCCceEEEeee
Q 021459 268 QKTM--IQKLDGHTDSVISVTCHPTENKIASAGL 299 (312)
Q Consensus 268 ~~~~--~~~~~~h~~~v~~l~~~p~~~~l~~~~~ 299 (312)
+... +++++ -...+..+++||..+.++.+..
T Consensus 724 ~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 724 EIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp CSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEE
T ss_pred ccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEE
Confidence 3321 22222 2346899999998887766553
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.98 E-value=1.1 Score=35.88 Aligned_cols=172 Identities=9% Similarity=0.048 Sum_probs=86.9
Q ss_pred cCCCeEEEEc--CCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecC--------------CcEEEEEcC
Q 021459 74 SDSHYICSAS--DDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFD--------------ESIRIWEVK 137 (312)
Q Consensus 74 ~~~~~l~~~~--~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------------g~i~~wd~~ 137 (312)
.++..|.... .++.|...+..... ...+.. +. +--++++++.++-+... ..|+..++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~--~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN--IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS--CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC--CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 3555555442 24555555544321 222221 11 23457888887766543 356777776
Q ss_pred CCeEEEEeeecCcCeEEEEEccCCCEEEEee----CCCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEec-
Q 021459 138 TGKCTRVIRAHSMPVTSVHFNRDGSLIVSGS----HDGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGTL- 212 (312)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 212 (312)
..+..... ..+ ...++++++.++-.. ....|...++.... ...+..... ..++++++.|.-.+.
T Consensus 97 g~~~~~l~---~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~-----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 97 GHGSTVLD---PDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL-----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp SCCCEEEE---CSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC-----CCSEEETTEEEEECTT
T ss_pred CCcceEee---cCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc-----eEeeEECCEEEEEeCC
Confidence 65432221 112 236777888777654 33455555655322 233332221 235677888776654
Q ss_pred CCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecC--CeEEEEECCch
Q 021459 213 DSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSED--NCVYVWDLQQK 269 (312)
Q Consensus 213 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~ 269 (312)
...|.+.++..+....++.+ ... . ... |++.+|+-...+ ..|..-++...
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~---~~~-~--~~~-P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC---NCY-K--PVV-LDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS---CEE-E--EEE-EETTEEEEEEGGGTTEEEEECSSSC
T ss_pred CceEEEEECCCCCEEEEeCC---Ccc-c--eee-ecCCEEEEEEcCCCcEEEEEECCCC
Confidence 57888888876654444322 111 1 122 456666544322 35655565443
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.60 E-value=4.2 Score=37.12 Aligned_cols=220 Identities=12% Similarity=0.131 Sum_probs=112.1
Q ss_pred cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeee-ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEE
Q 021459 64 SEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTL-RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCT 142 (312)
Q Consensus 64 ~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~ 142 (312)
...|.+|.-..+|.+- .|..+| +..||-..- ...... ......|.++....++ .|..++.+| +..||..+++..
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~G-L~ryDG~~~-~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKG-LFSYDGYST-QQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE 95 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSC-EEEECSSCE-EECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC
T ss_pred cceEEEEEECCCCCEE-EEECCC-ccccCCCce-EEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE
Confidence 3568888877777544 455666 566774321 111100 1123457787766665 556666655 789998876533
Q ss_pred EEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCceeeE-cc--cCCCCcEEEEEECCCCCEEEEEecCCeEEEE
Q 021459 143 RVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGACLKT-LI--DDKDPAVSFAKFSPNGKFILVGTLDSTLKLW 219 (312)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~ 219 (312)
.........|.++.. .++. +..++.+ .+..+|..+++...- .. .-....+..+..+.++.+.+ ++. +-+..+
T Consensus 96 ~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~ 170 (758)
T 3ott_A 96 QPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRY 170 (758)
T ss_dssp CCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEE
T ss_pred CcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhC
Confidence 211111234666654 4554 4555555 678888776543321 00 11123466666677776555 444 457788
Q ss_pred EcCCCcEEEEEEccCC---ceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEE
Q 021459 220 NYSAGKFLKIYTGHTN---KKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIA 295 (312)
Q Consensus 220 d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~ 295 (312)
|..+++... +..... ....+.......++..|-.|+. +-+..+|..+.+...........|.++...+++...+
T Consensus 171 ~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi 247 (758)
T 3ott_A 171 IPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA 247 (758)
T ss_dssp ETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE
T ss_pred ccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE
Confidence 876655432 211110 0111222333334444333444 3477888765433211111234577777776665444
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.43 E-value=0.35 Score=39.46 Aligned_cols=113 Identities=10% Similarity=0.194 Sum_probs=69.1
Q ss_pred CEEEEeecCCcEEEEEcCCCeEEEEeeec-CcCeEEEEE--cc-CCCEEEEe-eCCCeEEEEeCCCCceeeEcccC---C
Q 021459 120 NLIVSGSFDESIRIWEVKTGKCTRVIRAH-SMPVTSVHF--NR-DGSLIVSG-SHDGTCKIWDAGEGACLKTLIDD---K 191 (312)
Q Consensus 120 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~---~ 191 (312)
..++.++.||.|.-.|..+|+..-.++.. ..++....- .+ ++..++.. +.||.+..++..+|.....+... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888899999999999999887766543 122222110 01 23334443 68999999998877443222110 0
Q ss_pred CCcEEEE---EE-C----CCCCEEEEEecCCeEEEEEcCCCcEEEEEEc
Q 021459 192 DPAVSFA---KF-S----PNGKFILVGTLDSTLKLWNYSAGKFLKIYTG 232 (312)
Q Consensus 192 ~~~~~~~---~~-~----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 232 (312)
...+... .. . ..+..+.+|+.++.+.-.|.++|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1111100 00 0 1456788899999999999999998877653
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.43 E-value=3.3 Score=35.32 Aligned_cols=104 Identities=9% Similarity=0.107 Sum_probs=59.1
Q ss_pred CCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce-eeeeeec------ccccEEEEEEecC---CCEEEEeec-------
Q 021459 65 EGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-CLKTLRG------HSDFVFCVNFNPQ---SNLIVSGSF------- 127 (312)
Q Consensus 65 ~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-~~~~~~~------~~~~v~~~~~~~~---~~~l~s~~~------- 127 (312)
.....|+|.|+|+++++-...+.|++++..++.. .+..+.. .......++|+|+ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3457899999999777654445788887543322 1222211 1345678999995 455444332
Q ss_pred ------CCcEEEEEcCCC--e---EEEEe---ee-cCcCeEEEEEccCCCEEEEee
Q 021459 128 ------DESIRIWEVKTG--K---CTRVI---RA-HSMPVTSVHFNRDGSLIVSGS 168 (312)
Q Consensus 128 ------dg~i~~wd~~~~--~---~~~~~---~~-~~~~v~~~~~~~~~~~l~~~~ 168 (312)
...|.-+++..+ + ....+ .. .......++|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234666655332 1 11112 11 112367899999998777654
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.25 E-value=1.1 Score=39.19 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=63.3
Q ss_pred CEEEEEEccCCCeEEEEc-CCCeEEEEeCCCC-----------cee-eeeeecccccEEEEEEecCCCEEEEeecCCcEE
Q 021459 66 GISDLAWSSDSHYICSAS-DDRTLRIWDARTP-----------FDC-LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIR 132 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~~-~d~~v~~wd~~~~-----------~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 132 (312)
....+..+|||++++.++ .+.++.++|.+.. ... ....+ -.-.-...+|.++|+...+--.|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 345678999999877654 4778999997631 111 11111 112235678999997777777899999
Q ss_pred EEEcCCC----------eEEEEeeecCcCeEEEE-----EccCCCEEEEee
Q 021459 133 IWEVKTG----------KCTRVIRAHSMPVTSVH-----FNRDGSLIVSGS 168 (312)
Q Consensus 133 ~wd~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~ 168 (312)
.|++... ..+..+..|..+-...+ -.|+|++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9998642 33444444543322211 156888888864
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.13 E-value=6.9 Score=35.73 Aligned_cols=276 Identities=13% Similarity=0.165 Sum_probs=137.9
Q ss_pred CCccCCCCCCceeceeeecccccceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEe-eeccCCEEEEEEccCCCeE
Q 021459 1 MAAAQTPPYKPYRHFKTLTAHSRAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF-VGHSEGISDLAWSSDSHYI 79 (312)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l 79 (312)
|+-.+.+.+..++.+.. ..-...|+++.-..+|.+- .|..+| +..||-...+..... ......|.++.-..++. |
T Consensus 1 ~~~~~~~~~~~f~~~~~-gl~~n~V~~I~qD~~G~lW-igT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~-l 76 (758)
T 3ott_A 1 MEYGKKVNYQQFDNIYL-GAEASVVSCFLQDSEGLIW-IGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTY-L 76 (758)
T ss_dssp --------CCCCEEECC-CSSCCCEEEEEECTTSCEE-EEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTE-E
T ss_pred CCcccCcchhhhhcccc-ccccceEEEEEECCCCCEE-EEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCc-E
Confidence 44444444443333222 1235679999988888643 344666 455664322111000 01134588887776664 4
Q ss_pred EEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee----ecCcCeEEE
Q 021459 80 CSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR----AHSMPVTSV 155 (312)
Q Consensus 80 ~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~----~~~~~v~~~ 155 (312)
-.|..+| +..||..+.. ...........|.++.. .++ .+..++.+ -+..+|..+++...... .....|.++
T Consensus 77 WigT~~G-l~~yd~~~~~-f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i 151 (758)
T 3ott_A 77 YMGTDNG-ILVYNYRADR-YEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSI 151 (758)
T ss_dssp EEEETTE-EEEEETTTTE-ECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEE
T ss_pred EEEeCCC-eEEEeCCCCE-EECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEE
Confidence 4555555 7889976532 11111111234666643 344 55556655 58888987665432201 113457888
Q ss_pred EEccCCCEEEEeeCCCeEEEEeCCCCceeeEcccC----CCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEE
Q 021459 156 HFNRDGSLIVSGSHDGTCKIWDAGEGACLKTLIDD----KDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYT 231 (312)
Q Consensus 156 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 231 (312)
...+++.+.+ ++.. -+..+|..+++........ ....+..+..++++..|.+|+. +-+..+|..+++.... .
T Consensus 152 ~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~-~ 227 (758)
T 3ott_A 152 IRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQT-E 227 (758)
T ss_dssp EECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEE-E
T ss_pred EEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEec-c
Confidence 8877887665 4444 5777887665432211111 1123556666666665555664 4688888776654322 1
Q ss_pred ccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecc-------cCCccceEEEEEcCCCce
Q 021459 232 GHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKL-------DGHTDSVISVTCHPTENK 293 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~~p~~~~ 293 (312)
.. ....+.......++.+.+ |+.+| +.+++..+....... .-....|.++....++..
T Consensus 228 ~l--~~~~i~~i~~d~~g~lWi-gT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l 292 (758)
T 3ott_A 228 AF--HNNSIKSLALDGNGDLLA-GTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNI 292 (758)
T ss_dssp EE--EEEEEEEEEECTTCCEEE-EETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCE
T ss_pred CC--CCCeEEEEEEcCCCCEEE-EeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCE
Confidence 11 111233333334555444 44544 778887654321110 011235788877666543
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.13 E-value=3.6 Score=32.47 Aligned_cols=245 Identities=13% Similarity=0.061 Sum_probs=114.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeee
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTL 103 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~ 103 (312)
.|..++..... .++. . ||.+..|-.....++..-......|..++...... ++. . ||.|+.|-.....+ +...
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gq-lg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQ-TTVP 97 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTST-TCCC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCC-CCCC
Confidence 45666654332 2333 4 89999996554222111111234566776654332 333 4 89999996543211 1111
Q ss_pred ecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEeeecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCCCce
Q 021459 104 RGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIRAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGEGAC 183 (312)
Q Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (312)
..-...|..++...+ ..+.-. +|.|+.|-....-.+.........|..++...+ ..+.-. ||.+..|-......
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCC
Confidence 111235666665543 333334 899999975432111111112234666654333 333334 78899886543211
Q ss_pred eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCCcEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEE
Q 021459 184 LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAGKFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYV 263 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 263 (312)
+.... .....+..++...+ ..++. .||.|+.|-....-.+..-.........+.+ .....++. . ||.|..
T Consensus 172 lg~p~-~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~----G~~h~~al-~-~g~v~~ 241 (282)
T 3qhy_B 172 TTVPA-EAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS----GEWYSLAL-K-NGKVIA 241 (282)
T ss_dssp TSCCG-GGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE----CSSCEEEE-E-TTEEEE
T ss_pred CCCce-ecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEc----CCCEEEEE-E-CCEEEE
Confidence 11100 11123444444333 23333 5899999975432111100000111112221 12223333 3 999999
Q ss_pred EECCchheeecccCCccceEEEEEcCCCceEE
Q 021459 264 WDLQQKTMIQKLDGHTDSVISVTCHPTENKIA 295 (312)
Q Consensus 264 wd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~ 295 (312)
|-.+...++.. ...|..++..+.....+
T Consensus 242 wG~n~~gq~~v----~~~v~~iaaG~~h~~al 269 (282)
T 3qhy_B 242 WGSSRTAPSSV----QSGVSSIEAGPNAAYAL 269 (282)
T ss_dssp ESTTCCCCGGG----SSCEEEEEECSSCEEEE
T ss_pred ecCCCCccccC----CCCcEEEEECcCeEEEE
Confidence 97765444333 23577887766543333
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.67 E-value=2 Score=37.50 Aligned_cols=70 Identities=14% Similarity=0.187 Sum_probs=46.9
Q ss_pred eEEEEEccCCCEEEEee-CCCeEEEEeCCCCc------e-------eeEcccCCCCcEEEEEECCCCCEEEEEecCCeEE
Q 021459 152 VTSVHFNRDGSLIVSGS-HDGTCKIWDAGEGA------C-------LKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLK 217 (312)
Q Consensus 152 v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
...+..+|||+++++++ .+.++.++|...-. . ..+.. .+......+|+++|....+--.|.+|.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCceEeeeeecceEE
Confidence 35678899999988765 46789999986411 1 11111 122234567999996555566899999
Q ss_pred EEEcCC
Q 021459 218 LWNYSA 223 (312)
Q Consensus 218 v~d~~~ 223 (312)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999864
No 349
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.35 E-value=6.5 Score=32.13 Aligned_cols=231 Identities=12% Similarity=0.078 Sum_probs=115.4
Q ss_pred cCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCce-eeeee----ecccccEEEEEEecC---CCEEEEe---ecCCcEE
Q 021459 64 SEGISDLAWSSDSHYICSASDDRTLRIWDARTPFD-CLKTL----RGHSDFVFCVNFNPQ---SNLIVSG---SFDESIR 132 (312)
Q Consensus 64 ~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~-~~~~~----~~~~~~v~~~~~~~~---~~~l~s~---~~dg~i~ 132 (312)
-.....|+|.|+|+++++-...|.|++++...+.. .+..+ .........++++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34567899999999877765589999987654322 12111 112345688999995 3444332 2345566
Q ss_pred EEEcCCC----------eEE-EEeee-cCcCeEEEEEccCCCEEEEeeC-------------CCeEEEEeCCCCce----
Q 021459 133 IWEVKTG----------KCT-RVIRA-HSMPVTSVHFNRDGSLIVSGSH-------------DGTCKIWDAGEGAC---- 183 (312)
Q Consensus 133 ~wd~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~~---- 183 (312)
-|.+..+ +.+ ..+.. .......+.|.|||.+.++.+. .|.|.-.+....-.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665441 111 11111 1122456899999988777543 24444444332100
Q ss_pred --eeEcccCCCCcEEEEEECCCCCEEEEE-ecCCeEEEEEcCCCcE------------------EEEEEccCCceeEEEE
Q 021459 184 --LKTLIDDKDPAVSFAKFSPNGKFILVG-TLDSTLKLWNYSAGKF------------------LKIYTGHTNKKYCITS 242 (312)
Q Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~------------------~~~~~~~~~~~~~~~~ 242 (312)
-.++....-....-++|+|+|.+.++- +.++.=.|--+..+.. +..+..+. .....+
T Consensus 191 f~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~--~ap~G~ 268 (347)
T 3das_A 191 FPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE--ASPSGI 268 (347)
T ss_dssp STTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT--CCEEEE
T ss_pred CCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC--CCCcce
Confidence 000000011112345688887765543 2222122221222211 01111000 111222
Q ss_pred EEEccCCcEEEEeecCCeEEEEECCchhe----eecccCCccceEEEEEcCCCceEEEee
Q 021459 243 TFSVTNGKYIVSGSEDNCVYVWDLQQKTM----IQKLDGHTDSVISVTCHPTENKIASAG 298 (312)
Q Consensus 243 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~~p~~~~l~~~~ 298 (312)
.+. ++.+++..-..+.|....+..... ...+.+....+..|+..|+|..+++..
T Consensus 269 ~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 269 AYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 332 466666666666676666644321 122344446789999999998776644
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.02 E-value=7.1 Score=30.73 Aligned_cols=217 Identities=12% Similarity=0.060 Sum_probs=98.1
Q ss_pred CEEEEEEccCCCeEEEEcCCCeEEEEeCCCCceeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe
Q 021459 66 GISDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI 145 (312)
Q Consensus 66 ~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 145 (312)
.|..++..... .++ .. ||.|+.|-.....+ +.........|..++..... .++. . ||.|+.|-....-.+..-
T Consensus 25 ~i~~ia~G~~h-~~~-l~-~G~v~~wG~n~~Gq-lg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLA-LK-GGKVLGWGANLNGQ-LTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSE-EEE-EE-TTEEEEEECCSSST-TSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCe-EEE-EE-CCEEEEEeCCCCCC-CCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 56666654332 233 34 89999996543211 11111112345556554332 2333 4 899999975432111110
Q ss_pred eecCcCeEEEEEccCCCEEEEeeCCCeEEEEeCCC-CceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC
Q 021459 146 RAHSMPVTSVHFNRDGSLIVSGSHDGTCKIWDAGE-GACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG 224 (312)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 224 (312)
..-...|..++...+ ..+.-. +|.+..|-... ++.-... .....+..++...+ ..++-. ||.|+.|-....
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~--~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPA--EAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCG--GGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTT
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCc--cCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCC
Confidence 011235666665433 444445 89999996543 2221111 11223444433332 222233 789998875432
Q ss_pred cEEEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchheeecccCCccceEEEEEcCCCceEEEeeecCCee
Q 021459 225 KFLKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMIQKLDGHTDSVISVTCHPTENKIASAGLDGDRT 304 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~p~~~~l~~~~~dgd~~ 304 (312)
..+..-.........+. . .....++. +||.|..|-.+....+..-......|..++........++ || .
T Consensus 170 gqlg~p~~~~~~v~~i~---~-G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g--~ 238 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVA---G-GIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NG--K 238 (282)
T ss_dssp STTSCCGGGGSSEEEEE---E-CSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TT--E
T ss_pred CCCCCceecCCCeEEEE---e-cCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CC--E
Confidence 11110000011111121 1 22233444 6999999976543222111111234667766544322222 43 5
Q ss_pred EEEE
Q 021459 305 VRVW 308 (312)
Q Consensus 305 v~iw 308 (312)
|..|
T Consensus 239 v~~w 242 (282)
T 3qhy_B 239 VIAW 242 (282)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6666
No 351
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=86.10 E-value=12 Score=30.21 Aligned_cols=154 Identities=9% Similarity=0.025 Sum_probs=86.2
Q ss_pred cceEE-EEECC--CCCEEEEEeCCCeEEEEeCCCcce-------EEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEe
Q 021459 23 RAVSC-VKFSN--DGTLLASASLDKTVIIWSASSLAL-------VHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWD 92 (312)
Q Consensus 23 ~~v~~-~~~s~--~~~~l~t~~~d~~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd 92 (312)
..|.. +.... +...++.++.+|.++.-.+..... ...+.. .+.+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 34444 45543 578999999999999876544221 112222 34555555555556677777889888777
Q ss_pred CC--CCcee--------eeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCCC-------eEEEEee--ecCcCeE
Q 021459 93 AR--TPFDC--------LKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKTG-------KCTRVIR--AHSMPVT 153 (312)
Q Consensus 93 ~~--~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~-------~~~~~~~--~~~~~v~ 153 (312)
.. .-... ...+. ..+.|.++...+++..++..+..|.++.-.+..- +-...++ .....+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 65 21110 11122 2345666655556678888899999988775321 1122222 1122344
Q ss_pred EEEEccCCCEEEEeeCCCeEEEEeC
Q 021459 154 SVHFNRDGSLIVSGSHDGTCKIWDA 178 (312)
Q Consensus 154 ~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (312)
.+....+...++..+.+|.+.-++.
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEeh
Confidence 4433334455666677777666654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.09 E-value=15 Score=31.32 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=57.4
Q ss_pred ceEEEEECCCCC-EEEEEeCCCeEEEEeCCCcc---eEEEee-----e----ccCCEEEEEEccC----CCeEEEEcC--
Q 021459 24 AVSCVKFSNDGT-LLASASLDKTVIIWSASSLA---LVHRFV-----G----HSEGISDLAWSSD----SHYICSASD-- 84 (312)
Q Consensus 24 ~v~~~~~s~~~~-~l~t~~~d~~i~vw~~~~~~---~~~~~~-----~----~~~~v~~~~~~~~----~~~l~~~~~-- 84 (312)
.-..++|.|+|. .|+.+...|.|++++..... .+..+. + .......|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 345789999996 44445678999999754321 111111 1 1356788999996 333332221
Q ss_pred C----------CeEEEEeCCCC---------ceeeeeee--cccccEEEEEEecCCCEEEEeecCC
Q 021459 85 D----------RTLRIWDARTP---------FDCLKTLR--GHSDFVFCVNFNPQSNLIVSGSFDE 129 (312)
Q Consensus 85 d----------~~v~~wd~~~~---------~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg 129 (312)
+ ..|.-|.+... .+.+..+. ........+.|.||+.++++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13333544310 12222221 1123467899999998877766543
No 353
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=85.34 E-value=13 Score=29.80 Aligned_cols=189 Identities=12% Similarity=0.089 Sum_probs=102.1
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCcceE-------E--EeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCCCCcee--
Q 021459 31 SNDGTLLASASLDKTVIIWSASSLALV-------H--RFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDARTPFDC-- 99 (312)
Q Consensus 31 s~~~~~l~t~~~d~~i~vw~~~~~~~~-------~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~~~~~~-- 99 (312)
-|+...+++.+.+|.|+--........ . .+. ..+.+..+......+.++..+..|.++-.....-...
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 356778889999999988755433211 1 111 2244555555555556667778888766654211000
Q ss_pred ---------eeeeecccccEEEEEEec---CCCEEEEeecCCcEEEEEcCC-------CeEEEEeeecCcCeEEEEEccC
Q 021459 100 ---------LKTLRGHSDFVFCVNFNP---QSNLIVSGSFDESIRIWEVKT-------GKCTRVIRAHSMPVTSVHFNRD 160 (312)
Q Consensus 100 ---------~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
...+.. .+.+..+...+ +...++..+.+|.++.-.+.. |.....+.. ...+..+....+
T Consensus 84 ~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 84 ASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred cCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 011221 23344443322 356788889999998887642 221112222 344555555455
Q ss_pred CCEEEEeeCCCeEEEEeCCCC-------ceeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcC
Q 021459 161 GSLIVSGSHDGTCKIWDAGEG-------ACLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYS 222 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~ 222 (312)
+..++..+.+|....+...+- +-.+-+....+..+..+..-.++..+++.+..|..+...+.
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 567888899998888865321 11111111122333333333455678888899999988874
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.53 E-value=17 Score=34.32 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=25.3
Q ss_pred EEccCCcEEEEeecCCeEEEEECCchheeec
Q 021459 244 FSVTNGKYIVSGSEDNCVYVWDLQQKTMIQK 274 (312)
Q Consensus 244 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 274 (312)
...++..++++-+.|+++++|++.+++++..
T Consensus 242 ~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 242 IFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3445677999999999999999998876654
No 355
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=78.88 E-value=24 Score=28.42 Aligned_cols=233 Identities=12% Similarity=0.083 Sum_probs=118.2
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCcce----EEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC---CCCc-----ee
Q 021459 32 NDGTLLASASLDKTVIIWSASSLAL----VHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA---RTPF-----DC 99 (312)
Q Consensus 32 ~~~~~l~t~~~d~~i~vw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~---~~~~-----~~ 99 (312)
|+...+++.+.+|.|+--.....+. ...+. ..+.+..+......+.|+..+..|.++-... .... ..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 6677888999999998764432110 01122 2234444444445556666677887665543 2110 10
Q ss_pred e-e--eeecccccEEEE-EEec--CCCEEEEeecCCcEEEEEcCC--------CeEEEEeeecCcCeEEEEEccCCCEEE
Q 021459 100 L-K--TLRGHSDFVFCV-NFNP--QSNLIVSGSFDESIRIWEVKT--------GKCTRVIRAHSMPVTSVHFNRDGSLIV 165 (312)
Q Consensus 100 ~-~--~~~~~~~~v~~~-~~~~--~~~~l~s~~~dg~i~~wd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
+ . .+. ....|..+ ...+ ++..++..+.+|.++.-.+.. +.....+.. ...+..+........++
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 1 0 111 12334443 3332 256788889999999887641 211112222 23444444444556778
Q ss_pred EeeCCCeEEEEeCCC-------CceeeEc-ccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCC-------CcEEEEE
Q 021459 166 SGSHDGTCKIWDAGE-------GACLKTL-IDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSA-------GKFLKIY 230 (312)
Q Consensus 166 ~~~~d~~i~iwd~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~ 230 (312)
..+.+|.+..+...+ .+-.+-+ ....+..+....+.++...+++.+..|..+..++.. ++-+..+
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~ 239 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVIL 239 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECS
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECe
Confidence 888889887776532 1111111 122233444444544332788888899888877643 1112222
Q ss_pred EccCCce-eEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 231 TGHTNKK-YCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
....... ..+..... .++..++..+.+|.+.-.++..
T Consensus 240 ~~~~~~~~~l~~~~~v-~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 240 RELKANPHRISGFVVA-QDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp CCCSSSCCCEEEEEEE-CTTCEEEEEETTSCEEEEEGGG
T ss_pred eecCCCCceEEEEEEe-CCCCeEEEEeCCCeEEEEEhhh
Confidence 1111111 12222222 3344555667777776666543
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.22 E-value=36 Score=29.04 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=58.6
Q ss_pred CCEEEEEEccCCC-eEEEEcCCCeEEEEeCCCCc--eeeeeee-----c----ccccEEEEEEecC----CCEEEEeec-
Q 021459 65 EGISDLAWSSDSH-YICSASDDRTLRIWDARTPF--DCLKTLR-----G----HSDFVFCVNFNPQ----SNLIVSGSF- 127 (312)
Q Consensus 65 ~~v~~~~~~~~~~-~l~~~~~d~~v~~wd~~~~~--~~~~~~~-----~----~~~~v~~~~~~~~----~~~l~s~~~- 127 (312)
.....|+|.|++. .|+++...|.|++++..... ..+..+. + .......++++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999996 45556678999999753221 1111111 1 1345678999996 333333222
Q ss_pred -C----------CcEEEEEcCC----------CeEEEEeee--cCcCeEEEEEccCCCEEEEeeCC
Q 021459 128 -D----------ESIRIWEVKT----------GKCTRVIRA--HSMPVTSVHFNRDGSLIVSGSHD 170 (312)
Q Consensus 128 -d----------g~i~~wd~~~----------~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
+ ..|.-|.+.. .+.+..+.. .......|+|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455532 122222221 12235789999999877765543
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.88 E-value=9 Score=36.16 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=32.7
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEe
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF 60 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~ 60 (312)
..+.++...++..+++|-+.|+++|+|++.+++++...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35677888888999999999999999999999887654
No 358
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=69.70 E-value=40 Score=26.80 Aligned_cols=232 Identities=10% Similarity=0.034 Sum_probs=114.0
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCcceEE---------EeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC---CCCc--
Q 021459 32 NDGTLLASASLDKTVIIWSASSLALVH---------RFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA---RTPF-- 97 (312)
Q Consensus 32 ~~~~~l~t~~~d~~i~vw~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~---~~~~-- 97 (312)
|+...+++.+.+|.|+--......... .+. ..+.+..+......+.|+..+..|.++-... ....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456778888999999876654432211 112 2234444444444555666667887655543 2211
Q ss_pred ---eeee---eeecccccEEEEEEe---cCCCEEEEeecCCcEEEEEcCC-------CeEEEEeeecCcCeEEEEEccCC
Q 021459 98 ---DCLK---TLRGHSDFVFCVNFN---PQSNLIVSGSFDESIRIWEVKT-------GKCTRVIRAHSMPVTSVHFNRDG 161 (312)
Q Consensus 98 ---~~~~---~~~~~~~~v~~~~~~---~~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
..+. .+. ..+.|..+..- ++...++..+.+|.++.-.+.. +.....+..+ ..+..+....+.
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 0010 122 22345444332 3456788889999999887641 1111122222 344444444455
Q ss_pred CEEEEeeCCCeEEEEeCCC-------CceeeEc-ccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC-------cE
Q 021459 162 SLIVSGSHDGTCKIWDAGE-------GACLKTL-IDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG-------KF 226 (312)
Q Consensus 162 ~~l~~~~~d~~i~iwd~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-------~~ 226 (312)
..++..+.+|.+..++..+ ..-.+-+ +...+..+. +..-+++..+++.+..|.++-.++..- +-
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~-~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVS-LIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEE-EECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEE-EEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 5677888888887776432 1111111 112233333 333344567888889999888776321 11
Q ss_pred EEEEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCc
Q 021459 227 LKIYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQ 268 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (312)
+..+.-.......+..... .+..-++..+.+|.+.-++...
T Consensus 237 ~~~~~~~~~~~~lv~~~~v-~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQV-DDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EESSCCCTTTCSEEEEEEE-CTTCEEEEEESSCCEEEEEGGG
T ss_pred EEeeEecCCCCeEEEEEEe-CCCceEEEEcCCCcEEEEeccc
Confidence 1111111111122222222 2334455666777776666543
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.48 E-value=40 Score=26.32 Aligned_cols=154 Identities=10% Similarity=0.017 Sum_probs=84.7
Q ss_pred ccceEEEEECC-CCCEEEEEeCCCeEEEEeCCCcc------eEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeCC
Q 021459 22 SRAVSCVKFSN-DGTLLASASLDKTVIIWSASSLA------LVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDAR 94 (312)
Q Consensus 22 ~~~v~~~~~s~-~~~~l~t~~~d~~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~~ 94 (312)
...|..+-... +...++..+.+|.++........ ....+. ..+.+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 44565554321 56789999999999988765432 111122 23455555555555677777889988877653
Q ss_pred CCce--------eeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC-------CeEEEEeeecCcCeEEEEEcc
Q 021459 95 TPFD--------CLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT-------GKCTRVIRAHSMPVTSVHFNR 159 (312)
Q Consensus 95 ~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~ 159 (312)
.-.. ....+.. .+.|..+...+++..++..+..|.++...+.. ++-...+ .....+..+....
T Consensus 146 eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~ 223 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIK 223 (276)
T ss_dssp GSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEES
T ss_pred hCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeC
Confidence 2111 0111222 24555555455566888889999998887642 1112222 1223333333323
Q ss_pred CCCEEEEeeCCCeEEE--EeC
Q 021459 160 DGSLIVSGSHDGTCKI--WDA 178 (312)
Q Consensus 160 ~~~~l~~~~~d~~i~i--wd~ 178 (312)
++..++..+.+|.+.. ++.
T Consensus 224 ~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 224 EEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp SEEEEEEEETTSCEEEEEEEG
T ss_pred CCCEEEEEcCCCeEEEeeeCH
Confidence 3345555666666665 654
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.52 E-value=32 Score=30.44 Aligned_cols=59 Identities=22% Similarity=0.328 Sum_probs=40.5
Q ss_pred eEEEEEccCCCEEEEeeCC------------CeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEE
Q 021459 152 VTSVHFNRDGSLIVSGSHD------------GTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVG 210 (312)
Q Consensus 152 v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
.-.|.|+|.|.+++.-..+ +.+.+.+..+++..+.+.......++-.+|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3578999999876653221 2455566666766555555556778888999999887765
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.22 E-value=12 Score=36.03 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=29.7
Q ss_pred EEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEe
Q 021459 110 VFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVI 145 (312)
Q Consensus 110 v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 145 (312)
+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344555677789999999999999999999987764
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.18 E-value=40 Score=29.80 Aligned_cols=58 Identities=14% Similarity=0.222 Sum_probs=38.3
Q ss_pred eEEEEECCCCCEEEEEeCC------------CeEEEEeCCCcceEEEeeec-cCCEEEEEEccCCCeEEEE
Q 021459 25 VSCVKFSNDGTLLASASLD------------KTVIIWSASSLALVHRFVGH-SEGISDLAWSSDSHYICSA 82 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d------------~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 82 (312)
--.|.|+|.|++++.-..+ ..+.+.+..++++..-+.++ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568999999977654322 23445555666655444444 3578899999998877654
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=62.97 E-value=90 Score=28.35 Aligned_cols=198 Identities=12% Similarity=0.088 Sum_probs=98.6
Q ss_pred ceEEEE-ECCCCCEEEEE----eCC-CeEEEEeCCCcceEEE-ee-eccC------CEEEEEEccCCCeEEEE-------
Q 021459 24 AVSCVK-FSNDGTLLASA----SLD-KTVIIWSASSLALVHR-FV-GHSE------GISDLAWSSDSHYICSA------- 82 (312)
Q Consensus 24 ~v~~~~-~s~~~~~l~t~----~~d-~~i~vw~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~------- 82 (312)
....+. ++|++++++.+ |.| ..++++|+.+++.+.. +. .-+. ....++|..+..++++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 455566 89999986653 223 4789999998876531 11 0000 01234776444444431
Q ss_pred ---cCCCeEEEEeCCCCceee-eeeeccc-ccEEEEEEecCCC-----EEEEeecC---CcEEEEEcCC--CeEEEEeee
Q 021459 83 ---SDDRTLRIWDARTPFDCL-KTLRGHS-DFVFCVNFNPQSN-----LIVSGSFD---ESIRIWEVKT--GKCTRVIRA 147 (312)
Q Consensus 83 ---~~d~~v~~wd~~~~~~~~-~~~~~~~-~~v~~~~~~~~~~-----~l~s~~~d---g~i~~wd~~~--~~~~~~~~~ 147 (312)
.....|+.|.+.++...- ..+.+.. +.......++++. .+++.+.+ ..+.+.|... ++... +..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK-INM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-CCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-eec
Confidence 112568889887653221 1222222 2223344556655 24443322 3455556543 33222 211
Q ss_pred cCcCeEEEEEccCCCEEEEe----------eCCCeEEEEeCCCCc-------eeeE-cccCCCCcEEEEEECCCCCEEEE
Q 021459 148 HSMPVTSVHFNRDGSLIVSG----------SHDGTCKIWDAGEGA-------CLKT-LIDDKDPAVSFAKFSPNGKFILV 209 (312)
Q Consensus 148 ~~~~v~~~~~~~~~~~l~~~----------~~d~~i~iwd~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 209 (312)
... ..+..+.++.+++.. ...+.+...|+.+.. .... +....+..+..+.+..+ .++++
T Consensus 289 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 289 PSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp CTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred CCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 111 112334456555532 245678888876531 1122 22333445666667765 56666
Q ss_pred EecCCe--EEEEEcCCCc
Q 021459 210 GTLDST--LKLWNYSAGK 225 (312)
Q Consensus 210 ~~~d~~--i~v~d~~~~~ 225 (312)
...++. +.++|+.++.
T Consensus 366 ~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEETTEEEEEEECEETTE
T ss_pred EEECCEEEEEEEECCCCc
Confidence 666664 6677766554
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.65 E-value=20 Score=32.46 Aligned_cols=37 Identities=22% Similarity=0.478 Sum_probs=29.6
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEee
Q 021459 23 RAVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRFV 61 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~ 61 (312)
..|.++.+ +..++++-+.|+++|+|++.+++++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 35666655 47799999999999999999998776544
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.76 E-value=9.7 Score=36.78 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=30.7
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEeCCCcceEEEe
Q 021459 24 AVSCVKFSNDGTLLASASLDKTVIIWSASSLALVHRF 60 (312)
Q Consensus 24 ~v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~~~~ 60 (312)
.+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455566788899999999999999999999887654
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=56.78 E-value=76 Score=27.96 Aligned_cols=60 Identities=12% Similarity=0.209 Sum_probs=40.0
Q ss_pred cceEEEEECCCCCEEEEEeC------------CCeEEEEeCCCcceEEEeeec-cCCEEEEEEccCCCeEEEE
Q 021459 23 RAVSCVKFSNDGTLLASASL------------DKTVIIWSASSLALVHRFVGH-SEGISDLAWSSDSHYICSA 82 (312)
Q Consensus 23 ~~v~~~~~s~~~~~l~t~~~------------d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 82 (312)
..-..|.|+++|.+.+.-.. ...+..++..++++...+.+. ...++.++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45567999999997773221 124556666666654444433 2468999999999888765
No 367
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=55.67 E-value=85 Score=25.78 Aligned_cols=145 Identities=8% Similarity=0.002 Sum_probs=80.6
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCC---------cceEEEeeeccCCEEEEEEccCCCeEEEEcCCCeEEEEeC---CCC--
Q 021459 31 SNDGTLLASASLDKTVIIWSASS---------LALVHRFVGHSEGISDLAWSSDSHYICSASDDRTLRIWDA---RTP-- 96 (312)
Q Consensus 31 s~~~~~l~t~~~d~~i~vw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd~---~~~-- 96 (312)
-|+...+++.+.+|.|+--.+.. +.....++ ..+.+..+........|+..+..|.++-+.. ...
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 47888999999999998754322 11122222 2445655555555566666677887665543 211
Q ss_pred ----ceeee--eeecccccEEEEEEec---CCCEEEEeecCCcEEEEEcCC-------CeEEEEeeecCcCeEEEEEccC
Q 021459 97 ----FDCLK--TLRGHSDFVFCVNFNP---QSNLIVSGSFDESIRIWEVKT-------GKCTRVIRAHSMPVTSVHFNRD 160 (312)
Q Consensus 97 ----~~~~~--~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
..... .+. ....|.++..-. +...++.++..|.++.-.+.. +.....+.. ...+..+.....
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 00011 122 223444443322 346899999999999887632 211112222 233444444445
Q ss_pred CCEEEEeeCCCeEEEEeC
Q 021459 161 GSLIVSGSHDGTCKIWDA 178 (312)
Q Consensus 161 ~~~l~~~~~d~~i~iwd~ 178 (312)
...++..+..|.+..++.
T Consensus 161 ~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp CCEEEEEETTSEEEEEEG
T ss_pred CceEEEEeCCCeEEEEEc
Confidence 557777888888777754
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.26 E-value=89 Score=25.55 Aligned_cols=97 Identities=5% Similarity=-0.087 Sum_probs=45.4
Q ss_pred eEEEEcCCCeEEEEeCCC---CceeeeeeecccccEEEEEEec-CCCEEEEeecCC----cEEEEEcCCCeEEEEeee--
Q 021459 78 YICSASDDRTLRIWDART---PFDCLKTLRGHSDFVFCVNFNP-QSNLIVSGSFDE----SIRIWEVKTGKCTRVIRA-- 147 (312)
Q Consensus 78 ~l~~~~~d~~v~~wd~~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~-- 147 (312)
.|.++...| +.+++... ....... ......+.++.++| +...+..+...| .|...+ ..++.-..+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 566666666 44444322 1111111 11234688999998 334444454444 344332 22322111110
Q ss_pred ------------cCcCeEEEEEccC--CCEEEEeeCCCeEEEEe
Q 021459 148 ------------HSMPVTSVHFNRD--GSLIVSGSHDGTCKIWD 177 (312)
Q Consensus 148 ------------~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd 177 (312)
....|..+++.|. ...+.+++..+.|...+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 1124677888862 44566665566555543
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.11 E-value=1.1e+02 Score=26.95 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=39.5
Q ss_pred eEEEEEccCCCEEEEeeC------------CCeEEEEeCCCCceeeEcccCCCCcEEEEEECCCCCEEEEEe
Q 021459 152 VTSVHFNRDGSLIVSGSH------------DGTCKIWDAGEGACLKTLIDDKDPAVSFAKFSPNGKFILVGT 211 (312)
Q Consensus 152 v~~~~~~~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
...+.|.++|.+.++... .+.+..++..+++....+.........-++|+||++.|.+.-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 467999999988773221 225666777667654433222345577889999999887763
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.86 E-value=33 Score=31.04 Aligned_cols=36 Identities=11% Similarity=0.321 Sum_probs=28.3
Q ss_pred cEEEEEEecCCCEEEEeecCCcEEEEEcCCCeEEEEee
Q 021459 109 FVFCVNFNPQSNLIVSGSFDESIRIWEVKTGKCTRVIR 146 (312)
Q Consensus 109 ~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 146 (312)
.|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3454444 46799999999999999999999876654
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.62 E-value=1.5e+02 Score=23.74 Aligned_cols=264 Identities=9% Similarity=0.027 Sum_probs=124.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCcce-------EEEee-eccCCEEEEEEccCCCeEEEEcCCCeEEEEe---CCCC-----c
Q 021459 34 GTLLASASLDKTVIIWSASSLAL-------VHRFV-GHSEGISDLAWSSDSHYICSASDDRTLRIWD---ARTP-----F 97 (312)
Q Consensus 34 ~~~l~t~~~d~~i~vw~~~~~~~-------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~~wd---~~~~-----~ 97 (312)
...+++.+.+|.|+--....... ...+. ...+.+..+........|+.-+..|.++-.. +... .
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 45677888888888654322110 11111 1234455554444555555556777665443 3211 0
Q ss_pred eee---eeeecccccEEEE-EEec--CCCEEEEeecCCcEEEEEcCC-------CeEEEEeeecCcCeEEEEEccCCCEE
Q 021459 98 DCL---KTLRGHSDFVFCV-NFNP--QSNLIVSGSFDESIRIWEVKT-------GKCTRVIRAHSMPVTSVHFNRDGSLI 164 (312)
Q Consensus 98 ~~~---~~~~~~~~~v~~~-~~~~--~~~~l~s~~~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l 164 (312)
..+ ..+. ....|..+ ...+ +...++..+.+|.|+.-.+.. +.....++. ...+..+........+
T Consensus 83 ~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~i 160 (327)
T 3uc1_A 83 QHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDL 160 (327)
T ss_dssp EEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEE
T ss_pred EEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEE
Confidence 111 1122 12344444 3332 467899999999999887643 111112222 2344444444555678
Q ss_pred EEeeCCCeEEEEeCC--CC----c---eeeEcccCCCCcEEEEEECCCCCEEEEEecCCeEEEEEcCCC-------cEEE
Q 021459 165 VSGSHDGTCKIWDAG--EG----A---CLKTLIDDKDPAVSFAKFSPNGKFILVGTLDSTLKLWNYSAG-------KFLK 228 (312)
Q Consensus 165 ~~~~~d~~i~iwd~~--~~----~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-------~~~~ 228 (312)
+..+..|.+..+... +- . -..-+.-..+..+..+..-+.+..++..+..|.++.-.+..- +-+.
T Consensus 161 ll~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 161 LLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEE
Confidence 888888988777655 21 1 011111112233333333445568888999999988775321 1122
Q ss_pred EEEccCCceeEEEEEEEccCCcEEEEeecCCeEEEEECCchhee---------ecccCCccceEEEEEcC-CCceEEEee
Q 021459 229 IYTGHTNKKYCITSTFSVTNGKYIVSGSEDNCVYVWDLQQKTMI---------QKLDGHTDSVISVTCHP-TENKIASAG 298 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~h~~~v~~l~~~p-~~~~l~~~~ 298 (312)
.+.-.......+..... .+...++..+.+|.+.-++...-... ..+. ..+.|.+++..+ +...+.+.+
T Consensus 241 ~~~l~~~~d~lv~~~~~-~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~-~~d~vv~~~~~~~~~~~~~~~~ 318 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIV-DDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLG-EGDTLLAIARNAEESGDDNAVD 318 (327)
T ss_dssp SSCCCTTTCSEEEEEEE-CTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCC-TTCCEEEEEECC----------
T ss_pred EEEecCCCCeEEEEEEe-CCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecC-CCCEEEEEEEcCCCcceEEEEe
Confidence 22111101122322222 33456666778888887876432221 1222 234566666544 345566666
Q ss_pred ecC
Q 021459 299 LDG 301 (312)
Q Consensus 299 ~dg 301 (312)
.+|
T Consensus 319 ~~g 321 (327)
T 3uc1_A 319 ANG 321 (327)
T ss_dssp ---
T ss_pred cCC
Confidence 554
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.07 E-value=2.9e+02 Score=25.05 Aligned_cols=220 Identities=12% Similarity=0.112 Sum_probs=100.7
Q ss_pred EEE-EccCCCeEEEE-c----CCCeEEEEeCCCCceeeeeee-cccc------cEEEEEEecCCCEEEEe----------
Q 021459 69 DLA-WSSDSHYICSA-S----DDRTLRIWDARTPFDCLKTLR-GHSD------FVFCVNFNPQSNLIVSG---------- 125 (312)
Q Consensus 69 ~~~-~~~~~~~l~~~-~----~d~~v~~wd~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~l~s~---------- 125 (312)
.+. ++|++++++.+ | +-..++++|+.+....-..+. .... ....++|..+...+++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 444 88998876654 2 223689999987532211111 0000 01223665333333321
Q ss_pred ecCCcEEEEEcCCCe--EEEEeeecCcCe-EEEEEccCCCE-----EEEeeC---CCeEEEEeCCC--CceeeEcccCCC
Q 021459 126 SFDESIRIWEVKTGK--CTRVIRAHSMPV-TSVHFNRDGSL-----IVSGSH---DGTCKIWDAGE--GACLKTLIDDKD 192 (312)
Q Consensus 126 ~~dg~i~~wd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---d~~i~iwd~~~--~~~~~~~~~~~~ 192 (312)
+....|+.|.+-+.. -...+......+ .....++++++ +++.+. ...+.+.|... ++ ...+....+
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 291 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD 291 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc
Confidence 112458888776542 223444333332 23445566652 444332 23455556543 32 222322222
Q ss_pred CcEEEEEECCCCCEEEEE----------ecCCeEEEEEcCCC-------cEEEEEEccCCceeEEEEEEEccCCcEEEEe
Q 021459 193 PAVSFAKFSPNGKFILVG----------TLDSTLKLWNYSAG-------KFLKIYTGHTNKKYCITSTFSVTNGKYIVSG 255 (312)
Q Consensus 193 ~~~~~~~~~~~~~~l~~~----------~~d~~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (312)
..+ ....++.+++.. ...+.|...|+.++ .....+..+.... .+..... ..+.++++.
T Consensus 292 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~l~~~~ 366 (711)
T 4hvt_A 292 ATL---QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE-VFNFIST-TKDRVFLAT 366 (711)
T ss_dssp CEE---EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE-EEEEEEE-CSSCEEEEE
T ss_pred ceE---eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC-eEEEEEE-ECCEEEEEE
Confidence 211 123355444432 13567888887653 1122222222222 2322222 335677787
Q ss_pred ecCCe--EEEEECCchh-eeec---ccCCccceEEEEEcCCCceEE
Q 021459 256 SEDNC--VYVWDLQQKT-MIQK---LDGHTDSVISVTCHPTENKIA 295 (312)
Q Consensus 256 ~~dg~--i~iwd~~~~~-~~~~---~~~h~~~v~~l~~~p~~~~l~ 295 (312)
..+|. |.++|+.++. .... +.. .+.+......+++..++
T Consensus 367 ~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 367 YDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEE
T ss_pred EECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEE
Confidence 77875 5556654442 1222 222 23455566667665444
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=30.64 E-value=2.2e+02 Score=23.14 Aligned_cols=181 Identities=10% Similarity=0.009 Sum_probs=82.2
Q ss_pred CEEEEEeCCCeEEEEeCCC-cceEEEe--eeccCCEEEEEEcc--CCCeEEEEcCCC----eEEEEeCC-CCceeeee--
Q 021459 35 TLLASASLDKTVIIWSASS-LALVHRF--VGHSEGISDLAWSS--DSHYICSASDDR----TLRIWDAR-TPFDCLKT-- 102 (312)
Q Consensus 35 ~~l~t~~~d~~i~vw~~~~-~~~~~~~--~~~~~~v~~~~~~~--~~~~l~~~~~d~----~v~~wd~~-~~~~~~~~-- 102 (312)
..|..|...| +.+++... ++....+ ......|.+|++.| ++.+. ++...+ .|...+-. .....+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~-~g~~~g~~g~gl~~s~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERML-MAARTGHLGPTVFRSDDGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEE-EEEEC--CCEEEEEESSTTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEE-EEecCCCCCccEEEeCCCCCCceECCccc
Confidence 3566676766 44444322 2222211 11235689999998 44444 444444 44443211 11111111
Q ss_pred -eec--------ccccEEEEEEecC--CCEEEEeecCCcEEEEEcCCCeEEEEeee-------------------cCcCe
Q 021459 103 -LRG--------HSDFVFCVNFNPQ--SNLIVSGSFDESIRIWEVKTGKCTRVIRA-------------------HSMPV 152 (312)
Q Consensus 103 -~~~--------~~~~v~~~~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-------------------~~~~v 152 (312)
+.. ....|.++++.|. .+.++.+...+.|...+- .++.-..+.. ....+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 110 1124778888862 456666666665554432 2322222210 12246
Q ss_pred EEEEEccC-CCEEEEeeCCCeEEEEeCCCCceeeEcccC------------CCCcEEEEEECCC-CCEEEEEecCCeEEE
Q 021459 153 TSVHFNRD-GSLIVSGSHDGTCKIWDAGEGACLKTLIDD------------KDPAVSFAKFSPN-GKFILVGTLDSTLKL 218 (312)
Q Consensus 153 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~l~~~~~d~~i~v 218 (312)
..+.++|. ...+..+..++.+...+-..... ..+... ....+..+.++|. ...|.+++.. .|..
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW-~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~-gl~~ 257 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDW-KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC-GIYR 257 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSC-EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-EEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCc-eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-eEEE
Confidence 78888873 34455554444444433221111 111100 0123666778875 3566666544 4544
Q ss_pred EE
Q 021459 219 WN 220 (312)
Q Consensus 219 ~d 220 (312)
.+
T Consensus 258 s~ 259 (394)
T 3b7f_A 258 MD 259 (394)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 374
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.98 E-value=2.7e+02 Score=22.02 Aligned_cols=152 Identities=14% Similarity=0.135 Sum_probs=82.1
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCcceE------------EEeeeccCCEEEEEEcc---CCCeEEEEcCCCeEE
Q 021459 25 VSCVKFSNDGTLLASASLDKTVIIWSASSLALV------------HRFVGHSEGISDLAWSS---DSHYICSASDDRTLR 89 (312)
Q Consensus 25 v~~~~~s~~~~~l~t~~~d~~i~vw~~~~~~~~------------~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~ 89 (312)
+..+........++..+..|.++-......... ..+. ..+.|..+...+ +..+|+..+..|.++
T Consensus 49 l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 49 IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 334433334445556667777665543321110 0111 223455443332 456778888999988
Q ss_pred EEeCCCCc------eeeeeeecccccEEEEEEecCCCEEEEeecCCcEEEEEcCC---------CeEEEEeeecCcCeEE
Q 021459 90 IWDARTPF------DCLKTLRGHSDFVFCVNFNPQSNLIVSGSFDESIRIWEVKT---------GKCTRVIRAHSMPVTS 154 (312)
Q Consensus 90 ~wd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~v~~ 154 (312)
.-.+..-. .....+.. .+.+..+....+...++..+.+|.+..+.... |.....+. ....+..
T Consensus 128 r~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~ 205 (312)
T 1suu_A 128 RFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVK 205 (312)
T ss_dssp EEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEE
T ss_pred EEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEE
Confidence 87663210 11112333 34555555544456777888899888887643 11111122 2334555
Q ss_pred EEEccCCCEEEEeeCCCeEEEEeCC
Q 021459 155 VHFNRDGSLIVSGSHDGTCKIWDAG 179 (312)
Q Consensus 155 ~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (312)
+..-+++..+++.+..|..+..++.
T Consensus 206 ~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 206 VLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEECCCCeEEEEECCCceEEEEHH
Confidence 5554556678888899988888764
No 375
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.50 E-value=4e+02 Score=23.15 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=40.3
Q ss_pred ceEEEEECCCC--CEEEEEeCCCeEEEEeCCCc----ceEEEee--eccCCEE-EEEEccCCCeEEEEcCCCeEEE
Q 021459 24 AVSCVKFSNDG--TLLASASLDKTVIIWSASSL----ALVHRFV--GHSEGIS-DLAWSSDSHYICSASDDRTLRI 90 (312)
Q Consensus 24 ~v~~~~~s~~~--~~l~t~~~d~~i~vw~~~~~----~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~d~~v~~ 90 (312)
..+.++....+ ..++.|..+|.|.-..+... .....+. ....+|. .|.+++++.+|++++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 46666665433 35677888887743333221 1222222 1245775 8999999899998877665554
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.26 E-value=3.4e+02 Score=23.30 Aligned_cols=55 Identities=7% Similarity=0.138 Sum_probs=35.2
Q ss_pred EEEEeecCCcEEEEEc-CCCe-------EEEEeee--cCcCeEEEEEccCCCEEEEeeCCCeEEE
Q 021459 121 LIVSGSFDESIRIWEV-KTGK-------CTRVIRA--HSMPVTSVHFNRDGSLIVSGSHDGTCKI 175 (312)
Q Consensus 121 ~l~s~~~dg~i~~wd~-~~~~-------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (312)
.++.|..+|.|.-.-+ ..+. .+..+.. ...+|..|.++++..+|.+++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4677888888754332 2221 1222332 3468999999999999999988876654
No 377
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.83 E-value=4.1e+02 Score=23.95 Aligned_cols=55 Identities=9% Similarity=0.205 Sum_probs=35.4
Q ss_pred EEEEeecCCcEE-EEEcCCCe-------EEEEee--ecCcCeEEEEEccCCCEEEEeeCCCeEEE
Q 021459 121 LIVSGSFDESIR-IWEVKTGK-------CTRVIR--AHSMPVTSVHFNRDGSLIVSGSHDGTCKI 175 (312)
Q Consensus 121 ~l~s~~~dg~i~-~wd~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 175 (312)
.++.|..+|.|. +.-...+. .+..++ ....+|..|.++++...|.+++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 567788888874 33322211 112222 24567899999999999999998876665
Done!