Query 021460
Match_columns 312
No_of_seqs 147 out of 1615
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:28:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021460.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021460hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1okc_A ADP, ATP carrier protei 100.0 2E-58 7E-63 400.2 26.2 292 3-298 2-297 (297)
2 2lck_A Mitochondrial uncouplin 100.0 6E-57 2E-61 391.8 21.7 281 10-299 3-287 (303)
3 1okc_A ADP, ATP carrier protei 100.0 2.7E-36 9.3E-41 261.2 16.9 190 111-300 5-203 (297)
4 2lck_A Mitochondrial uncouplin 100.0 1.1E-35 3.8E-40 258.0 18.2 188 5-206 101-288 (303)
5 3fbl_A Putative uncharacterize 21.8 80 0.0028 19.1 2.7 25 55-79 4-28 (82)
6 2acm_A Mucin-1; auto-catalytic 13.6 40 0.0014 20.4 0.0 20 157-176 40-59 (66)
7 1y9i_A Low temperature require 13.3 1.5E+02 0.0052 22.5 3.1 40 189-228 112-157 (178)
8 2bnk_A Early protein GP16.7; D 12.4 1.1E+02 0.0038 18.3 1.7 45 229-274 20-65 (67)
9 3tgu_G UQCRQ, mitochondrial ub 11.5 1.8E+02 0.0063 18.8 2.7 37 266-302 33-70 (81)
10 2zc2_A DNAD-like replication p 10.9 1.3E+02 0.0044 18.9 1.9 38 232-269 35-72 (78)
No 1
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=2e-58 Score=400.16 Aligned_cols=292 Identities=47% Similarity=0.813 Sum_probs=248.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccchhhcccccCCCCChHHHHHHhhhhcchhhhhccchHHHHHH
Q 021460 3 KTSERFSTDFVMGGAAAIMAKSAAAPIERVKLLLQNQGEMIKRGQLRRPYMGVGDCFRRVLREDGLLSFWRGNQANVIRY 82 (312)
Q Consensus 3 ~~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~ 82 (312)
+++.++...+++|++|++++.+++||+|++|+|+|++......+ ....|++..+++++++++||++|||||+.+++++.
T Consensus 2 ~~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~-~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~ 80 (297)
T 1okc_A 2 DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQIS-AEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY 80 (297)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCC-GGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccc-cccccccHHHHHHHHHhccchhheecccHHHHHHH
Confidence 45677889999999999999999999999999999986422111 13468999999999999999999999999999999
Q ss_pred hhHhhhhHhHHHHHHHhh-ccCCCCCchhhhHHHHHHHHhHHHHHHHHHHhhHHHHHHHhhccccccccccccccCCHHH
Q 021460 83 FPTQAFNFAFKGYFKNLF-GRSKEKDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDARECLISGQRQFKGLLD 161 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~ 161 (312)
++..+++|.+||.+++.+ ......+.........+++|++||+++.++++|+|+||+|+|++.... .....|++.++
T Consensus 81 ~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~--~~~~~~~~~~~ 158 (297)
T 1okc_A 81 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--AAQREFTGLGN 158 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--TTTCSCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC--CcCcCCCCHHH
Confidence 999999999999999954 332222222234567889999999999999999999999999985421 12457899999
Q ss_pred HHHHHHhhccccccccccccchhhhhhhhhhhHHHHHhhhhhhhcCCCCChhHHHHHHHHHHHHhHhcccccHHHHHHHH
Q 021460 162 VYSKTLSSDGIGGLYRGFGVSIIGITFYRGMYFGLYDTMKPIILVGPLEGNFFASFLLGWSITSVSGVCAYPFDTLRRRM 241 (312)
Q Consensus 162 ~~~~i~~~~G~~gly~G~~~~ll~~~~~~~~~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r~ 241 (312)
++++|+++||++|||||+.|++++.++..+++|.+||.+|+.+.+. .+.+....+++|.+||++++++++|+|+||+||
T Consensus 159 ~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~ 237 (297)
T 1okc_A 159 CITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM 237 (297)
T ss_dssp HHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 9999999999999999999999999999999999999999987543 345667789999999999999999999999999
Q ss_pred HhhcCC---CCCCCCHHHHHHHHHHhccccccccchhhhHhhhhhhhhHHHHHHHHHHHH
Q 021460 242 MLTSGQ---PIKYDGAAHALCEIIKLEGFRALYRGVTANMLLGVAGAGVLAGYDQLHRIA 298 (312)
Q Consensus 242 q~~~~~---~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~e~~~~~~ 298 (312)
|.+... ...|.++++++++|+++||++|||||+.|++++.++.++.|.+||.+++.+
T Consensus 238 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 238 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC----
T ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccceeeehHHHHHHhhC
Confidence 987532 347899999999999999999999999999999767889999999988753
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=6e-57 Score=391.81 Aligned_cols=281 Identities=23% Similarity=0.362 Sum_probs=248.3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHhccchhhc--ccccCCCCChHHHHHHhhhhcchhhhhccchHHHHHHhhHhh
Q 021460 10 TDFVMGGAAAIMAKSAAAPIERVKLLLQNQGEMIKR--GQLRRPYMGVGDCFRRVLREDGLLSFWRGNQANVIRYFPTQA 87 (312)
Q Consensus 10 ~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~ 87 (312)
.++++|++|++++.+++||+|++|+|+|++...... ......|++..+++++++++||++|||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 468999999999999999999999999998642110 011246889999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHhhccCCCCCchhhhHHHHHHHHhHHHHHHHHHHhhHHHHHHHhhccccccccccccccCCHHHHHHHHH
Q 021460 88 FNFAFKGYFKNLFGRSKEKDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDARECLISGQRQFKGLLDVYSKTL 167 (312)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~i~ 167 (312)
++|.+|+.+++.+.+..+. .+....+++|++||+++.++++|+|+||+|+|++... .....|.+.++++++|+
T Consensus 83 i~f~~ye~~k~~~~~~~~~----~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~---~~~~~~~~~~~~~~~i~ 155 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSEH----AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA---GGGRRYQSTVEAYKTIA 155 (303)
T ss_dssp HTTTHHHHHHHHHSCCCSS----CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC---CCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcC----CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc---CCCCCCCCHHHHHHHHH
Confidence 9999999999988654221 3467789999999999999999999999999998642 12457899999999999
Q ss_pred hhccccccccccccchhhhhhhhhhhHHHHHhhhhhhhcCC-CCChhHHHHHHHHHHHHhHhcccccHHHHHHHHHhhcC
Q 021460 168 SSDGIGGLYRGFGVSIIGITFYRGMYFGLYDTMKPIILVGP-LEGNFFASFLLGWSITSVSGVCAYPFDTLRRRMMLTSG 246 (312)
Q Consensus 168 ~~~G~~gly~G~~~~ll~~~~~~~~~f~~y~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r~q~~~~ 246 (312)
++||++|||||+.|++++.++..+++|.+||.+|+.+.+.. .+.+....+++|++||++++++++|+|+||+|||.+.
T Consensus 156 ~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~- 234 (303)
T 2lck_A 156 REEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA- 234 (303)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc-
Confidence 99999999999999999999999999999999999987633 3556778899999999999999999999999999874
Q ss_pred CCCCCCCHHHHHHHHHHhccccccccchhhhHhhhhh-hhhHHHHHHHHHHHHH
Q 021460 247 QPIKYDGAAHALCEIIKLEGFRALYRGVTANMLLGVA-GAGVLAGYDQLHRIAY 299 (312)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~-~~~~~~~~e~~~~~~~ 299 (312)
...|.++++++++++++||++|||||+.+++++.+| ++++|.+||.+++.+.
T Consensus 235 -~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~ 287 (303)
T 2lck_A 235 -LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM 287 (303)
T ss_dssp -SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred -ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 346999999999999999999999999999999887 8999999999997653
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=2.7e-36 Score=261.20 Aligned_cols=190 Identities=21% Similarity=0.312 Sum_probs=164.7
Q ss_pred hhHHHHHHHHhHHHHHHHHHHhhHHHHHHHhhccccccccccccccCCHHHHHHHHHhhccccccccccccchhhhhhhh
Q 021460 111 KWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDARECLISGQRQFKGLLDVYSKTLSSDGIGGLYRGFGVSIIGITFYR 190 (312)
Q Consensus 111 ~~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~ll~~~~~~ 190 (312)
.+.+..+++|++||+++.++++|+|+||+|+|++...........|++.++++++|+++||++|||||+.|++++.++..
T Consensus 5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~ 84 (297)
T 1okc_A 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence 35678899999999999999999999999999986432222245789999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhhhhhc-CCCC----ChhHHHHHHHHHHHHhHhcccccHHHHHHHHHhhcC---CCCCCCCHHHHHHHHH
Q 021460 191 GMYFGLYDTMKPIILV-GPLE----GNFFASFLLGWSITSVSGVCAYPFDTLRRRMMLTSG---QPIKYDGAAHALCEII 262 (312)
Q Consensus 191 ~~~f~~y~~~~~~~~~-~~~~----~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r~q~~~~---~~~~~~~~~~~~~~i~ 262 (312)
+++|.+||.+|+.+.. ...+ .+....+++|++||++++++++|+|+||+|||.+.. ....|.+.++++++++
T Consensus 85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~ 164 (297)
T 1okc_A 85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF 164 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence 9999999999995433 2221 134678999999999999999999999999999743 2357899999999999
Q ss_pred HhccccccccchhhhHhhhhh-hhhHHHHHHHHHHHHHh
Q 021460 263 KLEGFRALYRGVTANMLLGVA-GAGVLAGYDQLHRIAYR 300 (312)
Q Consensus 263 ~~~G~~gly~G~~~~~~~~~~-~~~~~~~~e~~~~~~~~ 300 (312)
++||++|||||+.+++++.+| .++.|.+||.+++.+.+
T Consensus 165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~ 203 (297)
T 1okc_A 165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD 203 (297)
T ss_dssp HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG
T ss_pred HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999887 88999999999997643
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.1e-35 Score=257.96 Aligned_cols=188 Identities=20% Similarity=0.326 Sum_probs=167.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccchhhcccccCCCCChHHHHHHhhhhcchhhhhccchHHHHHHhh
Q 021460 5 SERFSTDFVMGGAAAIMAKSAAAPIERVKLLLQNQGEMIKRGQLRRPYMGVGDCFRRVLREDGLLSFWRGNQANVIRYFP 84 (312)
Q Consensus 5 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~ 84 (312)
..+....+++|++|++++.++++|+|++|+|+|++... .....|++..+++++|+++||++|||||+.|++++.++
T Consensus 101 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~----~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~ 176 (303)
T 2lck_A 101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA----GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAI 176 (303)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC----CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc----CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHH
Confidence 35677899999999999999999999999999998642 11246899999999999999999999999999999999
Q ss_pred HhhhhHhHHHHHHHhhccCCCCCchhhhHHHHHHHHhHHHHHHHHHHhhHHHHHHHhhccccccccccccccCCHHHHHH
Q 021460 85 TQAFNFAFKGYFKNLFGRSKEKDGYIKWFAGNVASGSAAGATTSLFLYHLDYARTRLGTDARECLISGQRQFKGLLDVYS 164 (312)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~ 164 (312)
..+++|.+||.+++.+.+..... .+....+++|++||++++++++|+|+||+|+|++.. ..|.+++++++
T Consensus 177 ~~~i~f~~ye~~k~~l~~~~~~~---~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~-------~~y~~~~~~~~ 246 (303)
T 2lck_A 177 VNCAELVTYDLIKDTLLKANLMT---DDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL-------GQYHSAGHCAL 246 (303)
T ss_dssp HHHHHHHHHHHHHHTTTTTTSCC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS-------SSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCC---CchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc-------cccCCHHHHHH
Confidence 99999999999999886543211 235677899999999999999999999999999753 46899999999
Q ss_pred HHHhhccccccccccccchhhhhhhhhhhHHHHHhhhhhhhc
Q 021460 165 KTLSSDGIGGLYRGFGVSIIGITFYRGMYFGLYDTMKPIILV 206 (312)
Q Consensus 165 ~i~~~~G~~gly~G~~~~ll~~~~~~~~~f~~y~~~~~~~~~ 206 (312)
+|+++||++|||||+.|++++.+|..+++|.+||.+|+.+..
T Consensus 247 ~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~ 288 (303)
T 2lck_A 247 TMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 288 (303)
T ss_dssp HHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988754
No 5
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=21.82 E-value=80 Score=19.13 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=17.8
Q ss_pred hHHHHHHhhhhcchhhhhccchHHH
Q 021460 55 VGDCFRRVLREDGLLSFWRGNQANV 79 (312)
Q Consensus 55 ~~~~~~~i~~~~G~~gly~G~~~~~ 79 (312)
++-+++++++++|++.+-.|+-..+
T Consensus 4 lrlaikeicktdgipnikwgmyiaf 28 (82)
T 3fbl_A 4 LRLAIKEICKTDGIPNIKWGMYIAF 28 (82)
T ss_dssp HHHHHHHHHHHTTCCGGGHHHHHHH
T ss_pred HHHHHHHHHccCCCCcchhHHHHHH
Confidence 5567889999999887655544333
No 6
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=13.63 E-value=40 Score=20.35 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHhhccccccc
Q 021460 157 KGLLDVYSKTLSSDGIGGLY 176 (312)
Q Consensus 157 ~~~~~~~~~i~~~~G~~gly 176 (312)
+++.+.+.+||+++++.|++
T Consensus 40 r~is~L~lqIykq~~FLgl~ 59 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLS 59 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEE
T ss_pred HHHHHHHHHHHccCCeeeee
Confidence 35667788899999998875
No 7
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=13.32 E-value=1.5e+02 Score=22.48 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=26.8
Q ss_pred hhhhhHHHHHhhhhhhhc--CC----CCChhHHHHHHHHHHHHhHh
Q 021460 189 YRGMYFGLYDTMKPIILV--GP----LEGNFFASFLLGWSITSVSG 228 (312)
Q Consensus 189 ~~~~~f~~y~~~~~~~~~--~~----~~~~~~~~~~~~~~a~~~~~ 228 (312)
...+.|..||..|..... +. .-..++.++++|++|++++.
T Consensus 112 ~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~ 157 (178)
T 1y9i_A 112 IGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASR 157 (178)
T ss_dssp GGHHHHHHHHHHCCTHHHHTTCCCSSCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhHHhhhcccCCCCcchHHHHHHHHHHHHHHH
Confidence 456778889999876543 11 12457788888888777653
No 8
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=12.37 E-value=1.1e+02 Score=18.26 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=31.3
Q ss_pred cccccHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHhccccccccch
Q 021460 229 VCAYPFDTLRRRMMLTSG-QPIKYDGAAHALCEIIKLEGFRALYRGV 274 (312)
Q Consensus 229 ~~t~Pld~i~~r~q~~~~-~~~~~~~~~~~~~~i~~~~G~~gly~G~ 274 (312)
-+-.|+|.|---. .+.. ....-.++...-+..|+-|--+-+|||.
T Consensus 20 nIrIP~DIIEdl~-~~~L~te~EVmnYiEnqR~~WKLEN~KKly~g~ 65 (67)
T 2bnk_A 20 NIRIPSDIIEDLV-NQRLQSEQEVLNYIETQRTYWKLENQKKLYRGS 65 (67)
T ss_dssp TCCCCHHHHHHHH-TTCCCCSHHHHHHHHHHHHHHHHHTTSCCCCSC
T ss_pred CCcCcHHHHHHHH-HHhhhhHHHHHHHHHhhHhHHhhhhhHHHHhcc
Confidence 4567999987644 2221 1223456788888889999889999985
No 9
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=11.46 E-value=1.8e+02 Score=18.79 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=25.0
Q ss_pred cccccccchhhhHhhhhh-hhhHHHHHHHHHHHHHhcC
Q 021460 266 GFRALYRGVTANMLLGVA-GAGVLAGYDQLHRIAYRHG 302 (312)
Q Consensus 266 G~~gly~G~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~ 302 (312)
|+...+|-+.-.++..+| ..+...+|+...+.-+...
T Consensus 33 ~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~ 70 (81)
T 3tgu_G 33 ALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLK 70 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 455555666667777665 6677899988887765443
No 10
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=10.91 E-value=1.3e+02 Score=18.92 Aligned_cols=38 Identities=13% Similarity=-0.029 Sum_probs=24.7
Q ss_pred ccHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHhccccc
Q 021460 232 YPFDTLRRRMMLTSGQPIKYDGAAHALCEIIKLEGFRA 269 (312)
Q Consensus 232 ~Pld~i~~r~q~~~~~~~~~~~~~~~~~~i~~~~G~~g 269 (312)
+|-|+|..=++.....+...-++.+.+..-|+++|++.
T Consensus 35 ~~~elI~~A~~~a~~~~~~s~~Yi~~Il~~W~~~gi~T 72 (78)
T 2zc2_A 35 TDPDLVRSALREAVFNGKTNWNYIQAILRNWRHEGIST 72 (78)
T ss_dssp CCHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCC
Confidence 67777775554321122334578888999999999864
Done!