Query 021465
Match_columns 312
No_of_seqs 132 out of 145
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 04:32:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021465.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021465hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3na7_A HP0958; flagellar bioge 97.9 0.0012 4.1E-08 60.4 19.3 128 58-189 19-149 (256)
2 1i84_S Smooth muscle myosin he 97.6 8.9E-05 3E-09 81.0 8.0 40 49-88 863-902 (1184)
3 1i84_S Smooth muscle myosin he 97.6 7.2E-05 2.5E-09 81.7 6.8 44 49-92 856-899 (1184)
4 2dfs_A Myosin-5A; myosin-V, in 97.6 0.0012 4.1E-08 71.9 16.2 120 62-188 919-1039(1080)
5 3na7_A HP0958; flagellar bioge 97.5 0.011 3.8E-07 54.0 19.3 42 58-99 12-53 (256)
6 3vkg_A Dynein heavy chain, cyt 97.3 0.014 4.9E-07 69.6 21.8 133 95-227 1937-2069(3245)
7 3vkg_A Dynein heavy chain, cyt 97.1 0.061 2.1E-06 64.4 24.6 76 149-227 2015-2090(3245)
8 3oja_B Anopheles plasmodium-re 97.1 0.0037 1.2E-07 62.1 12.4 34 197-230 548-581 (597)
9 3oja_B Anopheles plasmodium-re 97.1 0.0093 3.2E-07 59.2 14.8 40 169-208 534-573 (597)
10 1deq_A Fibrinogen (alpha chain 97.0 0.19 6.6E-06 49.0 22.5 49 66-125 62-110 (390)
11 2dfs_A Myosin-5A; myosin-V, in 96.9 0.027 9.2E-07 61.4 17.7 15 145-159 988-1002(1080)
12 3o0z_A RHO-associated protein 96.7 0.19 6.5E-06 43.9 17.8 62 101-162 46-111 (168)
13 2v71_A Nuclear distribution pr 96.4 0.32 1.1E-05 43.2 18.1 147 73-225 19-172 (189)
14 2fxo_A Myosin heavy chain, car 96.3 0.38 1.3E-05 39.7 16.8 111 103-219 13-123 (129)
15 3o0z_A RHO-associated protein 96.2 0.59 2E-05 40.8 18.4 124 94-222 19-151 (168)
16 3ol1_A Vimentin; structural ge 95.8 0.21 7.2E-06 40.9 13.0 44 115-158 57-100 (119)
17 2fxo_A Myosin heavy chain, car 95.7 0.71 2.4E-05 38.1 16.3 104 124-227 17-124 (129)
18 3ol1_A Vimentin; structural ge 95.5 0.31 1.1E-05 39.9 13.0 68 123-193 44-111 (119)
19 3ghg_A Fibrinogen alpha chain; 95.5 0.11 3.6E-06 52.7 11.7 52 173-224 103-155 (562)
20 2v4h_A NF-kappa-B essential mo 95.4 0.21 7.3E-06 40.8 11.2 65 148-219 45-109 (110)
21 2xnx_M M protein, M1-BC1; cell 95.2 0.01 3.5E-07 50.7 3.0 60 125-187 71-130 (146)
22 3q8t_A Beclin-1; autophagy, AT 95.1 0.94 3.2E-05 35.8 14.0 87 131-220 8-94 (96)
23 3hnw_A Uncharacterized protein 94.8 0.62 2.1E-05 39.2 12.9 83 99-184 35-122 (138)
24 2no2_A HIP-I, huntingtin-inter 94.8 0.89 3E-05 36.7 13.3 88 125-212 13-101 (107)
25 3ghg_A Fibrinogen alpha chain; 94.7 0.21 7E-06 50.6 11.2 82 93-190 75-156 (562)
26 3mq7_A Bone marrow stromal ant 93.9 1.3 4.5E-05 36.6 12.4 53 122-187 55-107 (121)
27 3iox_A AGI/II, PA; alpha helix 93.8 1.8 6.2E-05 43.5 15.9 99 125-229 7-109 (497)
28 2eqb_B RAB guanine nucleotide 93.7 2.1 7.3E-05 34.2 13.4 90 124-226 2-95 (97)
29 3tnu_A Keratin, type I cytoske 93.6 1 3.6E-05 37.1 11.7 19 80-98 33-51 (131)
30 3swk_A Vimentin; cytoskeleton, 93.5 0.52 1.8E-05 36.6 9.1 50 112-161 34-83 (86)
31 1wt6_A Myotonin-protein kinase 93.5 0.24 8.3E-06 38.4 7.0 48 113-160 17-64 (81)
32 3tnu_B Keratin, type II cytosk 93.2 1.3 4.3E-05 36.4 11.7 6 57-62 18-23 (129)
33 3mq9_A Bone marrow stromal ant 93.2 2.3 7.7E-05 41.0 15.2 76 145-226 394-469 (471)
34 3u1c_A Tropomyosin alpha-1 cha 93.0 2.8 9.5E-05 33.2 13.8 33 124-156 6-38 (101)
35 3hnw_A Uncharacterized protein 93.0 0.85 2.9E-05 38.4 10.4 64 146-212 66-129 (138)
36 1deq_A Fibrinogen (alpha chain 93.0 1.7 5.7E-05 42.4 13.6 41 166-206 135-175 (390)
37 3m91_A Proteasome-associated A 92.7 0.25 8.5E-06 35.2 5.6 43 49-91 8-50 (51)
38 3tnu_B Keratin, type II cytosk 92.3 2.5 8.5E-05 34.7 12.2 18 181-198 108-125 (129)
39 3edv_A Spectrin beta chain, br 92.2 6.2 0.00021 35.5 17.8 156 69-225 150-316 (323)
40 2ocy_A RAB guanine nucleotide 92.2 5.1 0.00018 34.4 16.2 28 74-101 16-43 (154)
41 3swk_A Vimentin; cytoskeleton, 92.2 1.5 5.1E-05 34.0 10.0 66 113-184 17-82 (86)
42 2v71_A Nuclear distribution pr 92.0 6.3 0.00022 34.9 21.0 79 104-188 32-111 (189)
43 1x79_B RAB GTPase binding effe 91.7 2.5 8.6E-05 34.6 11.3 94 69-178 11-104 (112)
44 1gk4_A Vimentin; intermediate 91.7 2.5 8.5E-05 32.4 10.8 67 89-158 12-78 (84)
45 3q8t_A Beclin-1; autophagy, AT 91.7 4.1 0.00014 32.1 14.3 39 123-161 35-73 (96)
46 2v4h_A NF-kappa-B essential mo 91.6 3.8 0.00013 33.4 12.1 47 115-161 57-103 (110)
47 1m1j_B Fibrinogen beta chain; 91.6 6.9 0.00024 39.0 16.6 98 124-226 97-194 (464)
48 3jsv_C NF-kappa-B essential mo 91.5 0.89 3E-05 36.2 8.1 65 150-221 25-89 (94)
49 3tnu_A Keratin, type I cytoske 91.4 4.7 0.00016 33.1 12.9 31 169-199 81-111 (131)
50 3iox_A AGI/II, PA; alpha helix 91.3 3.2 0.00011 41.7 13.8 59 75-136 6-64 (497)
51 4emc_A Monopolin complex subun 91.2 0.57 1.9E-05 41.7 7.5 47 47-93 10-56 (190)
52 2zqm_A Prefoldin beta subunit 90.8 1.2 4.1E-05 35.1 8.4 18 113-130 30-47 (117)
53 3a7p_A Autophagy protein 16; c 90.6 4 0.00014 35.0 12.0 43 120-162 96-138 (152)
54 2eqb_B RAB guanine nucleotide 90.0 5.4 0.00018 31.9 11.4 18 76-93 3-20 (97)
55 3i00_A HIP-I, huntingtin-inter 89.9 1.4 4.7E-05 36.4 8.2 39 82-120 19-57 (120)
56 3lay_A Zinc resistance-associa 89.2 2.3 8E-05 37.1 9.7 23 203-225 116-138 (175)
57 2xnx_M M protein, M1-BC1; cell 89.2 3.1 0.00011 35.5 10.0 22 203-224 118-139 (146)
58 3mq7_A Bone marrow stromal ant 89.2 8.4 0.00029 31.8 13.1 53 178-230 52-108 (121)
59 3mq9_A Bone marrow stromal ant 89.1 12 0.0004 35.9 15.6 27 166-192 444-470 (471)
60 3u59_A Tropomyosin beta chain; 89.0 7.1 0.00024 30.7 15.4 39 123-161 5-43 (101)
61 3oja_A Leucine-rich immune mol 89.0 14 0.00048 35.6 16.1 55 172-226 417-475 (487)
62 3a7p_A Autophagy protein 16; c 88.9 6.2 0.00021 33.9 11.8 65 135-202 69-133 (152)
63 2jee_A YIIU; FTSZ, septum, coi 88.8 2.4 8.3E-05 32.8 8.4 32 200-231 41-72 (81)
64 2zqm_A Prefoldin beta subunit 88.7 3 0.0001 32.8 9.3 25 203-227 87-111 (117)
65 1f5n_A Interferon-induced guan 88.6 6.4 0.00022 40.2 13.9 87 47-139 460-549 (592)
66 2efr_A General control protein 88.4 11 0.00038 32.3 21.9 81 144-227 73-153 (155)
67 1x79_B RAB GTPase binding effe 87.9 6.7 0.00023 32.0 10.9 75 122-202 8-82 (112)
68 3mov_A Lamin-B1; LMNB1, B-type 87.9 2.3 7.9E-05 33.6 8.0 78 77-157 11-88 (95)
69 3s4r_A Vimentin; alpha-helix, 87.9 6.8 0.00023 30.6 10.7 33 127-159 56-88 (93)
70 1x8y_A Lamin A/C; structural p 87.7 3.7 0.00013 31.6 8.9 52 104-158 29-80 (86)
71 3lay_A Zinc resistance-associa 87.5 1.4 4.8E-05 38.5 7.1 21 166-186 114-134 (175)
72 3bas_A Myosin heavy chain, str 87.4 7.5 0.00026 30.0 10.6 38 125-162 19-56 (89)
73 1jcd_A Major outer membrane li 87.4 1.8 6.1E-05 30.9 6.3 41 146-189 9-49 (52)
74 1f5n_A Interferon-induced guan 87.4 21 0.00073 36.3 16.8 63 168-230 497-583 (592)
75 1ez3_A Syntaxin-1A; three heli 86.9 9.9 0.00034 30.1 11.5 19 122-140 14-32 (127)
76 1l8d_A DNA double-strand break 86.7 5.9 0.0002 31.0 9.9 41 122-162 5-45 (112)
77 2pih_A Protein YMCA; regulate 86.7 13 0.00045 31.1 15.5 56 105-162 6-61 (151)
78 3jsv_C NF-kappa-B essential mo 86.6 9.6 0.00033 30.3 10.7 51 111-161 31-81 (94)
79 4ad8_A DNA repair protein RECN 86.4 15 0.00052 35.9 14.8 15 169-183 289-303 (517)
80 2no2_A HIP-I, huntingtin-inter 86.2 12 0.0004 30.1 13.8 29 112-140 46-74 (107)
81 1m1j_A Fibrinogen alpha subuni 86.0 17 0.00058 36.3 14.6 50 177-226 109-158 (491)
82 2w83_C C-JUN-amino-terminal ki 85.4 3.7 0.00013 31.5 7.5 17 57-73 9-25 (77)
83 2i1j_A Moesin; FERM, coiled-co 85.4 0.57 2E-05 47.6 4.0 30 71-100 297-326 (575)
84 1fxk_A Prefoldin; archaeal pro 85.3 5.8 0.0002 30.6 9.1 21 203-223 82-102 (107)
85 2efk_A CDC42-interacting prote 85.2 20 0.00069 31.9 17.2 18 63-80 75-92 (301)
86 3i00_A HIP-I, huntingtin-inter 85.1 7.4 0.00025 32.0 9.9 72 97-184 9-80 (120)
87 1wle_A Seryl-tRNA synthetase; 85.0 8.3 0.00029 38.6 12.2 33 121-153 71-103 (501)
88 3onj_A T-snare VTI1; helix, HA 84.9 12 0.00041 29.2 10.7 84 74-167 4-92 (97)
89 3etw_A Adhesin A; antiparallel 84.8 15 0.00052 30.2 12.8 39 196-234 70-111 (119)
90 3m9b_A Proteasome-associated A 84.6 1.2 4.2E-05 41.1 5.5 44 49-92 53-96 (251)
91 2qyw_A Vesicle transport throu 84.6 9.7 0.00033 30.0 10.1 82 73-164 17-101 (102)
92 3s4r_A Vimentin; alpha-helix, 84.6 7.2 0.00025 30.5 9.2 15 105-119 25-39 (93)
93 2ocy_A RAB guanine nucleotide 83.9 20 0.00067 30.8 18.3 18 203-220 125-142 (154)
94 1gk4_A Vimentin; intermediate 83.3 13 0.00045 28.3 10.5 20 180-199 58-77 (84)
95 1go4_E MAD1 (mitotic arrest de 82.3 7.5 0.00026 31.1 8.6 20 206-225 74-93 (100)
96 3haj_A Human pacsin2 F-BAR; pa 81.7 41 0.0014 32.8 17.3 19 167-185 152-170 (486)
97 2e7s_A RAB guanine nucleotide 80.6 2.2 7.6E-05 36.0 5.1 17 145-161 43-59 (135)
98 2jee_A YIIU; FTSZ, septum, coi 80.6 14 0.00047 28.6 9.2 13 173-185 56-68 (81)
99 2e7s_A RAB guanine nucleotide 80.3 0.93 3.2E-05 38.3 2.7 19 125-143 13-31 (135)
100 1m1j_C Fibrinogen gamma chain; 79.9 25 0.00085 34.4 13.1 31 200-230 105-135 (409)
101 3sjb_C Golgi to ER traffic pro 79.9 2.6 8.9E-05 33.5 5.0 58 121-190 24-81 (93)
102 4emc_A Monopolin complex subun 78.9 8.2 0.00028 34.2 8.4 35 123-157 9-43 (190)
103 3mov_A Lamin-B1; LMNB1, B-type 78.6 8.8 0.0003 30.2 7.7 21 179-199 68-88 (95)
104 2efl_A Formin-binding protein 78.4 36 0.0012 30.2 17.7 12 67-78 86-97 (305)
105 3vp9_A General transcriptional 78.2 2.5 8.4E-05 33.5 4.4 59 166-225 15-86 (92)
106 2w6b_A RHO guanine nucleotide 78.0 7.3 0.00025 28.1 6.4 33 167-199 12-44 (56)
107 2dq0_A Seryl-tRNA synthetase; 77.9 30 0.001 34.0 13.1 32 196-227 72-103 (455)
108 3iyk_A VP5; icosahedral virus; 77.1 45 0.0015 33.7 14.0 98 133-232 152-251 (526)
109 4dk0_A Putative MACA; alpha-ha 77.0 7.1 0.00024 35.9 7.9 20 208-227 130-149 (369)
110 1fxk_A Prefoldin; archaeal pro 76.8 23 0.00079 27.1 10.1 28 203-230 75-102 (107)
111 3pdy_A Plectin; cytoskeleton, 76.2 36 0.0012 29.1 20.7 33 67-99 41-73 (210)
112 4dzn_A Coiled-coil peptide CC- 76.2 3.7 0.00013 26.1 3.9 26 73-98 4-29 (33)
113 2w83_C C-JUN-amino-terminal ki 76.1 24 0.00082 27.0 9.6 58 120-187 9-66 (77)
114 1t3j_A Mitofusin 1; coiled coi 76.0 9.9 0.00034 30.3 7.3 52 89-140 40-91 (96)
115 3iyk_A VP5; icosahedral virus; 76.0 70 0.0024 32.3 18.9 27 161-187 185-211 (526)
116 2nrj_A HBL B protein; enteroto 75.9 26 0.00089 33.2 11.7 70 68-137 120-193 (346)
117 1ses_A Seryl-tRNA synthetase; 75.6 9.6 0.00033 37.1 8.7 31 197-227 68-98 (421)
118 3a7o_A Autophagy protein 16; c 75.6 12 0.00042 28.3 7.3 32 62-93 9-40 (75)
119 1wt6_A Myotonin-protein kinase 75.5 17 0.00058 28.1 8.3 37 125-161 36-72 (81)
120 3qne_A Seryl-tRNA synthetase, 75.4 39 0.0013 33.7 13.2 31 196-226 74-104 (485)
121 1x8y_A Lamin A/C; structural p 75.1 18 0.0006 27.7 8.5 22 179-200 59-80 (86)
122 1gu4_A CAAT/enhancer binding p 75.0 12 0.00042 28.4 7.4 53 116-168 25-77 (78)
123 3qne_A Seryl-tRNA synthetase, 75.0 16 0.00056 36.5 10.3 35 119-153 32-66 (485)
124 1fxk_C Protein (prefoldin); ar 74.7 13 0.00046 29.9 8.2 23 203-225 105-127 (133)
125 4e61_A Protein BIM1; EB1-like 74.5 14 0.00048 29.9 7.9 38 119-156 3-40 (106)
126 3u59_A Tropomyosin beta chain; 74.2 29 0.001 27.1 13.9 32 128-159 24-55 (101)
127 2dq0_A Seryl-tRNA synthetase; 73.7 18 0.00061 35.6 10.2 28 124-151 35-62 (455)
128 1ic2_A Tropomyosin alpha chain 73.2 27 0.00091 26.2 9.0 13 125-137 4-16 (81)
129 3r6n_A Desmoplakin; spectrin r 72.9 75 0.0026 31.2 19.2 101 47-148 46-161 (450)
130 1hjb_A Ccaat/enhancer binding 72.9 14 0.00047 28.8 7.3 50 118-167 27-76 (87)
131 3iv1_A Tumor susceptibility ge 72.7 30 0.001 26.5 9.2 51 176-226 22-72 (78)
132 1t2k_D Cyclic-AMP-dependent tr 72.4 17 0.00059 25.8 7.3 43 120-162 15-57 (61)
133 4gkw_A Spindle assembly abnorm 72.4 44 0.0015 28.3 18.2 28 175-202 115-142 (167)
134 1vcs_A Vesicle transport throu 72.2 14 0.00049 29.0 7.5 78 77-164 11-90 (102)
135 4dk0_A Putative MACA; alpha-ha 72.1 12 0.0004 34.5 8.1 24 204-227 133-156 (369)
136 1joc_A EEA1, early endosomal a 71.8 21 0.00072 29.0 8.6 39 104-145 5-43 (125)
137 3u1c_A Tropomyosin alpha-1 cha 71.6 34 0.0012 26.8 14.8 57 123-189 19-75 (101)
138 3vp9_A General transcriptional 71.6 3.9 0.00013 32.4 3.9 39 124-162 18-57 (92)
139 1cii_A Colicin IA; bacteriocin 71.6 89 0.003 31.5 16.4 20 73-92 351-370 (602)
140 1cii_A Colicin IA; bacteriocin 71.2 90 0.0031 31.5 14.3 35 125-159 361-395 (602)
141 2v0o_A FCHO2, FCH domain only 71.2 53 0.0018 28.7 18.8 14 67-80 83-96 (276)
142 3abh_A Pacsin2, protein kinase 71.1 59 0.002 29.2 14.1 20 167-186 159-178 (312)
143 3qh9_A Liprin-beta-2; coiled-c 71.0 34 0.0012 26.4 9.3 59 120-181 19-77 (81)
144 3fpp_A Macrolide-specific effl 70.5 11 0.00039 34.2 7.5 17 211-227 132-148 (341)
145 4e61_A Protein BIM1; EB1-like 70.3 30 0.001 27.9 9.0 25 72-96 5-29 (106)
146 3iv1_A Tumor susceptibility ge 70.1 20 0.00069 27.4 7.5 39 123-161 14-52 (78)
147 3efg_A Protein SLYX homolog; x 70.0 9.3 0.00032 29.0 5.7 37 70-117 27-63 (78)
148 4dzn_A Coiled-coil peptide CC- 69.2 6.4 0.00022 24.9 3.8 8 152-159 6-13 (33)
149 2yy0_A C-MYC-binding protein; 68.2 9.1 0.00031 27.1 4.9 27 122-148 21-47 (53)
150 3sja_C Golgi to ER traffic pro 68.1 5.4 0.00019 29.7 3.8 39 121-161 7-45 (65)
151 2ke4_A CDC42-interacting prote 68.0 7.3 0.00025 30.9 4.9 18 144-161 18-35 (98)
152 3hhm_B NISH2 P85alpha; PI3KCA, 68.0 66 0.0022 30.9 12.6 56 173-228 199-254 (373)
153 2zuo_A MVP, major vault protei 68.0 1.3E+02 0.0046 32.1 20.3 28 192-219 763-790 (861)
154 3qh9_A Liprin-beta-2; coiled-c 67.8 32 0.0011 26.6 8.2 36 188-224 43-78 (81)
155 2w6a_A ARF GTPase-activating p 67.7 18 0.00061 26.5 6.4 40 125-164 18-57 (63)
156 2v66_B Nuclear distribution pr 67.7 48 0.0016 26.9 17.0 72 103-187 3-74 (111)
157 3htk_A Structural maintenance 67.4 27 0.00092 24.4 7.4 17 172-188 40-56 (60)
158 1ci6_A Transcription factor AT 67.1 27 0.00093 25.2 7.5 43 119-161 15-57 (63)
159 2wt7_A Proto-oncogene protein 66.9 26 0.00089 25.2 7.3 39 123-161 19-57 (63)
160 2avr_X Adhesion A; antiparalle 66.9 52 0.0018 27.0 14.4 102 126-234 8-111 (119)
161 2a3d_A Protein (de novo three- 66.7 17 0.00058 26.7 6.2 20 166-185 52-71 (73)
162 3l4q_C Phosphatidylinositol 3- 66.7 64 0.0022 28.0 16.1 42 121-162 11-52 (170)
163 3ghg_B Fibrinogen beta chain; 66.6 83 0.0028 31.4 13.1 34 198-231 161-194 (461)
164 4dci_A Uncharacterized protein 66.3 54 0.0019 27.8 10.3 80 123-203 24-104 (150)
165 3lss_A Seryl-tRNA synthetase; 66.3 36 0.0012 33.9 10.6 29 199-227 109-138 (484)
166 3m91_A Proteasome-associated A 65.5 20 0.00067 25.3 6.2 31 131-161 13-43 (51)
167 1use_A VAsp, vasodilator-stimu 65.4 17 0.00058 25.2 5.6 10 153-162 20-29 (45)
168 3fpp_A Macrolide-specific effl 65.2 14 0.00049 33.5 7.0 12 214-225 128-139 (341)
169 1fxk_C Protein (prefoldin); ar 65.0 17 0.00057 29.3 6.7 25 203-227 98-122 (133)
170 2oeq_A Protein of unknown func 64.3 53 0.0018 26.1 10.7 99 107-219 7-106 (122)
171 1wlq_A Geminin; coiled-coil; 2 64.2 11 0.00037 29.3 5.0 48 59-111 33-80 (83)
172 2v0o_A FCHO2, FCH domain only 64.2 73 0.0025 27.8 15.9 6 47-52 22-27 (276)
173 1ykh_B RNA polymerase II holoe 64.0 56 0.0019 26.9 9.8 74 68-155 54-127 (132)
174 1sjj_A Actinin; 3-helix bundle 63.9 1.4E+02 0.0046 30.7 19.4 34 68-101 408-441 (863)
175 2a3d_A Protein (de novo three- 63.9 16 0.00056 26.7 5.6 56 75-138 6-69 (73)
176 1go4_E MAD1 (mitotic arrest de 63.9 41 0.0014 26.8 8.5 16 172-187 75-90 (100)
177 1l8d_A DNA double-strand break 63.1 50 0.0017 25.5 10.9 14 79-92 11-24 (112)
178 3i2w_A Syndapin, LD46328P; EFC 63.1 62 0.0021 28.8 10.8 6 203-208 219-224 (290)
179 1uii_A Geminin; human, DNA rep 62.9 39 0.0013 26.2 7.9 19 168-186 56-74 (83)
180 4dyl_A Tyrosine-protein kinase 62.8 97 0.0033 29.5 12.7 29 130-158 362-390 (406)
181 1jcd_A Major outer membrane li 62.7 34 0.0012 24.2 7.0 17 146-162 16-32 (52)
182 2pms_C Pneumococcal surface pr 62.5 66 0.0023 26.7 11.6 26 73-98 8-33 (125)
183 1j1d_B Troponin T, TNT; THIN f 62.4 49 0.0017 26.5 8.8 67 96-162 18-84 (106)
184 3trt_A Vimentin; cytoskeleton, 62.4 43 0.0015 24.5 9.7 35 146-183 40-74 (77)
185 2dq3_A Seryl-tRNA synthetase; 62.1 25 0.00085 34.2 8.4 27 199-225 74-100 (425)
186 1yke_B RNA polymerase II holoe 61.8 55 0.0019 27.6 9.6 76 69-158 55-130 (151)
187 1use_A VAsp, vasodilator-stimu 61.8 10 0.00036 26.2 4.0 15 168-182 18-32 (45)
188 3fb2_A Spectrin alpha chain, b 61.4 74 0.0025 26.9 15.5 28 68-95 50-77 (218)
189 2i1j_A Moesin; FERM, coiled-co 61.4 18 0.00061 36.6 7.5 61 125-185 340-400 (575)
190 3cvf_A Homer-3, homer protein 61.0 53 0.0018 25.1 9.3 27 60-86 16-42 (79)
191 3bas_A Myosin heavy chain, str 60.7 54 0.0018 25.0 9.6 28 175-202 34-61 (89)
192 3vlc_E Golgi to ER traffic pro 60.7 2.3 7.9E-05 33.8 0.6 59 119-189 29-87 (94)
193 1uii_A Geminin; human, DNA rep 60.5 11 0.00038 29.3 4.4 36 60-95 42-77 (83)
194 2b9c_A Striated-muscle alpha t 60.3 23 0.0008 29.8 6.9 22 206-227 72-93 (147)
195 3ghg_B Fibrinogen beta chain; 59.8 74 0.0025 31.7 11.3 37 123-159 91-127 (461)
196 1jnm_A Proto-oncogene C-JUN; B 59.8 25 0.00086 25.1 6.1 42 120-161 15-56 (62)
197 1u4q_A Spectrin alpha chain, b 59.4 94 0.0032 27.4 18.6 30 70-99 42-71 (322)
198 2efk_A CDC42-interacting prote 59.3 94 0.0032 27.4 18.1 20 168-187 133-152 (301)
199 3r2p_A Apolipoprotein A-I; amp 59.3 83 0.0028 26.7 14.4 16 166-181 112-127 (185)
200 2v66_B Nuclear distribution pr 59.2 70 0.0024 25.9 11.4 23 62-84 8-30 (111)
201 1naf_A ADP-ribosylation factor 58.9 75 0.0026 27.1 9.9 97 109-215 16-113 (158)
202 2xv5_A Lamin-A/C; structural p 58.5 42 0.0014 25.2 7.3 8 188-195 45-52 (74)
203 1gd2_E Transcription factor PA 58.3 20 0.00069 26.7 5.5 23 95-117 21-43 (70)
204 1m1j_A Fibrinogen alpha subuni 58.3 1.5E+02 0.0053 29.6 16.1 79 96-190 79-157 (491)
205 3s9g_A Protein hexim1; cyclin 58.0 63 0.0022 25.9 8.5 36 127-162 44-79 (104)
206 1t3j_A Mitofusin 1; coiled coi 57.6 32 0.0011 27.3 6.8 53 88-140 32-84 (96)
207 3pe0_A Plectin; cytoskeleton, 57.4 1.1E+02 0.0038 27.7 13.5 25 73-97 50-74 (283)
208 3ni0_A Bone marrow stromal ant 57.3 71 0.0024 25.4 10.1 20 166-185 68-87 (99)
209 1wle_A Seryl-tRNA synthetase; 57.3 61 0.0021 32.4 10.4 32 196-227 119-150 (501)
210 3kqg_A Langerin, C-type lectin 56.9 7.9 0.00027 32.0 3.4 16 146-161 4-19 (182)
211 3pdy_A Plectin; cytoskeleton, 56.8 92 0.0031 26.5 15.8 97 128-224 85-201 (210)
212 2dgc_A Protein (GCN4); basic d 56.7 26 0.00089 25.4 5.7 42 116-157 19-60 (63)
213 3lss_A Seryl-tRNA synthetase; 56.7 71 0.0024 31.8 10.7 35 120-154 37-71 (484)
214 3okq_A BUD site selection prot 56.5 91 0.0031 26.3 13.3 61 134-194 21-83 (141)
215 3s9g_A Protein hexim1; cyclin 56.3 70 0.0024 25.6 8.5 28 66-93 32-59 (104)
216 4ani_A Protein GRPE; chaperone 56.3 1.1E+02 0.0038 27.3 11.2 16 123-138 90-105 (213)
217 3fx0_A NF-kappa-B essential mo 55.9 17 0.00057 29.0 4.9 35 153-187 43-77 (96)
218 3aco_A Pacsin2, protein kinase 55.2 1.3E+02 0.0043 27.6 15.3 18 75-92 85-102 (350)
219 2wvr_A Geminin; DNA replicatio 55.0 67 0.0023 28.7 9.2 20 167-186 124-143 (209)
220 4gkw_A Spindle assembly abnorm 54.9 97 0.0033 26.2 15.4 8 170-177 65-72 (167)
221 3uun_A Dystrophin; triple heli 54.6 64 0.0022 24.0 12.3 89 136-224 4-102 (119)
222 1ik9_A DNA repair protein XRCC 54.6 1.2E+02 0.0039 27.0 11.9 16 142-157 194-209 (213)
223 3frt_A Charged multivesicular 54.2 1.2E+02 0.0041 27.0 11.7 34 153-186 59-92 (218)
224 4etp_A Kinesin-like protein KA 53.8 25 0.00086 34.0 6.8 55 166-227 4-58 (403)
225 1u5p_A Spectrin alpha chain, b 53.5 96 0.0033 25.8 18.9 32 68-99 40-71 (216)
226 3kbt_A Beta-I spectrin, spectr 53.2 1.2E+02 0.0041 26.8 19.2 31 68-98 41-71 (326)
227 2ve7_A Kinetochore protein HEC 53.1 14 0.00046 34.7 4.7 35 164-198 184-218 (315)
228 3l4q_C Phosphatidylinositol 3- 52.9 1.1E+02 0.0039 26.4 13.3 105 74-182 34-148 (170)
229 3plt_A Sphingolipid long chain 52.8 1.3E+02 0.0046 27.2 19.0 75 102-187 61-146 (234)
230 3kbt_A Beta-I spectrin, spectr 52.6 1.2E+02 0.0042 26.7 17.3 10 73-82 152-161 (326)
231 1ci6_A Transcription factor AT 51.9 26 0.0009 25.2 5.1 37 58-94 24-60 (63)
232 3ghg_C Fibrinogen gamma chain; 51.8 1.8E+02 0.0062 28.4 15.1 100 123-232 34-137 (411)
233 2iaz_A Hypothetical protein SP 51.4 82 0.0028 24.3 12.1 51 106-165 3-53 (113)
234 1oxz_A ADP-ribosylation factor 51.4 1.2E+02 0.0042 26.4 11.1 53 110-164 33-85 (186)
235 2ve7_C Kinetochore protein NUF 51.3 16 0.00054 33.3 4.7 65 54-118 138-205 (250)
236 3sja_C Golgi to ER traffic pro 51.2 53 0.0018 24.3 6.6 22 169-190 36-57 (65)
237 3ibp_A Chromosome partition pr 51.0 1.6E+02 0.0056 27.7 12.0 33 69-101 15-47 (302)
238 1gd2_E Transcription factor PA 51.0 24 0.00081 26.3 4.8 8 131-138 33-40 (70)
239 3k29_A Putative uncharacterize 50.9 1.2E+02 0.0042 26.2 17.2 38 83-120 35-75 (169)
240 1cxz_B Protein (PKN); protein- 50.8 50 0.0017 25.6 6.8 18 101-118 36-53 (86)
241 3a7o_A Autophagy protein 16; c 50.6 79 0.0027 23.9 8.5 52 70-135 10-61 (75)
242 2efl_A Formin-binding protein 50.4 1.3E+02 0.0045 26.4 19.9 42 143-187 118-159 (305)
243 1s94_A S-syntaxin; three helix 49.8 1E+02 0.0034 25.8 9.3 18 124-141 78-95 (180)
244 1ytz_T Troponin T; muscle, THI 49.7 57 0.0019 26.2 7.2 66 97-162 19-84 (107)
245 2xdj_A Uncharacterized protein 49.6 85 0.0029 24.0 9.0 23 168-190 23-45 (83)
246 3viq_A SWI5-dependent recombin 49.6 31 0.0011 28.3 5.7 61 69-156 5-65 (122)
247 3ra3_A P1C; coiled coil domain 49.3 4.8 0.00016 24.7 0.6 22 62-83 5-26 (28)
248 3l4f_A RHO guanine nucleotide 49.0 60 0.0021 23.7 6.5 30 169-198 11-40 (61)
249 3he4_A Synzip6; heterodimeric 48.9 11 0.00039 26.3 2.5 46 183-228 7-52 (56)
250 2fcw_A Alpha-2-macroglobulin r 48.9 1E+02 0.0036 24.9 8.6 28 202-229 76-103 (109)
251 3ni0_A Bone marrow stromal ant 48.6 1E+02 0.0034 24.5 10.2 49 172-220 39-87 (99)
252 3csx_A Putative uncharacterize 48.5 61 0.0021 24.9 6.9 58 127-187 15-72 (81)
253 2xv5_A Lamin-A/C; structural p 48.4 77 0.0026 23.7 7.3 34 125-158 24-57 (74)
254 3u06_A Protein claret segregat 48.3 60 0.0021 31.5 8.6 27 124-150 7-33 (412)
255 2js5_A Uncharacterized protein 47.8 66 0.0023 24.2 6.8 57 128-187 4-60 (71)
256 1m1j_C Fibrinogen gamma chain; 47.7 1.9E+02 0.0063 28.2 11.9 25 76-100 46-70 (409)
257 4h22_A Leucine-rich repeat fli 47.2 1.1E+02 0.0037 24.5 9.0 23 139-161 21-43 (103)
258 2f1m_A Acriflavine resistance 46.6 65 0.0022 28.2 7.9 13 125-137 58-70 (277)
259 2oto_A M protein; helical coil 46.4 1.2E+02 0.0042 25.0 18.4 23 67-89 25-47 (155)
260 2pms_C Pneumococcal surface pr 46.3 76 0.0026 26.3 7.6 22 203-224 99-120 (125)
261 2ve7_C Kinetochore protein NUF 46.2 16 0.00054 33.3 3.8 27 135-161 142-168 (250)
262 4etp_A Kinesin-like protein KA 46.2 64 0.0022 31.1 8.4 20 168-187 20-39 (403)
263 2rjz_A PILO protein; structura 46.0 37 0.0013 28.2 5.8 35 153-187 3-37 (147)
264 3cve_A Homer protein homolog 1 45.8 75 0.0026 23.8 6.9 34 59-92 9-42 (72)
265 3hhm_B NISH2 P85alpha; PI3KCA, 45.7 2.1E+02 0.0071 27.4 15.1 36 121-156 199-234 (373)
266 4hpq_C ATG17, KLTH0D15642P; au 45.3 2.3E+02 0.0077 27.7 19.1 54 105-158 213-266 (413)
267 3cvf_A Homer-3, homer protein 45.2 75 0.0026 24.3 6.9 24 125-148 50-73 (79)
268 3sjb_C Golgi to ER traffic pro 44.8 82 0.0028 24.8 7.2 30 168-197 52-81 (93)
269 1cun_A Protein (alpha spectrin 44.6 1.3E+02 0.0045 24.7 18.2 29 69-97 38-66 (213)
270 3u06_A Protein claret segregat 44.2 62 0.0021 31.4 8.0 31 125-155 29-59 (412)
271 3fhn_A Protein transport prote 44.1 3E+02 0.01 28.7 13.7 47 128-174 11-57 (706)
272 1gs9_A Apolipoprotein E, APOE4 43.3 1.5E+02 0.0052 25.1 12.0 10 215-224 151-160 (165)
273 2dq3_A Seryl-tRNA synthetase; 43.2 51 0.0018 31.9 7.2 27 124-150 72-98 (425)
274 3oa7_A Head morphogenesis prot 43.0 32 0.0011 30.7 5.1 35 128-162 31-65 (206)
275 3he5_B Synzip2; heterodimeric 42.9 68 0.0023 22.1 5.6 12 216-227 33-44 (52)
276 3nmd_A CGMP dependent protein 42.6 87 0.003 23.6 6.8 23 203-225 43-65 (72)
277 1t2k_D Cyclic-AMP-dependent tr 42.5 44 0.0015 23.6 5.0 34 59-92 24-57 (61)
278 3he4_B Synzip5; heterodimeric 42.4 42 0.0014 22.6 4.4 30 166-195 14-43 (46)
279 3kqg_A Langerin, C-type lectin 42.1 17 0.00058 29.9 3.1 13 126-138 5-17 (182)
280 2wvr_A Geminin; DNA replicatio 42.0 39 0.0013 30.2 5.6 33 61-93 112-144 (209)
281 1vcs_A Vesicle transport throu 42.0 1.2E+02 0.0041 23.5 10.9 55 171-227 37-94 (102)
282 3ra3_B P2F; coiled coil domain 41.8 30 0.001 21.1 3.3 20 69-88 5-24 (28)
283 3brv_B NF-kappa-B essential mo 41.3 99 0.0034 23.2 6.8 42 59-103 10-51 (70)
284 3r4h_A Coiled coil helix CC-TE 41.3 40 0.0014 21.4 3.9 25 73-97 4-28 (34)
285 2lf0_A Uncharacterized protein 41.2 55 0.0019 27.0 5.9 53 131-190 7-61 (123)
286 2qag_C Septin-7; cell cycle, c 41.1 5.7 0.00019 38.6 0.0 53 104-161 323-375 (418)
287 4ani_A Protein GRPE; chaperone 40.8 1.1E+02 0.0038 27.2 8.5 18 211-228 137-154 (213)
288 2iub_A CORA, divalent cation t 40.8 1.8E+02 0.0063 26.9 10.5 123 115-242 190-329 (363)
289 1lwu_A Fibrinogen alpha-1 chai 40.5 54 0.0018 26.9 5.7 47 178-224 21-67 (119)
290 2x3v_A Syndapin I, protein kin 39.7 2.1E+02 0.0073 25.8 18.9 6 47-52 24-29 (337)
291 3aco_A Pacsin2, protein kinase 39.5 2.2E+02 0.0077 25.9 17.1 7 47-53 33-39 (350)
292 1m5i_A APC protein; coiled-coi 39.0 1.6E+02 0.0056 24.2 10.4 50 180-229 56-109 (125)
293 2p22_C Protein SRN2; endosome, 38.9 2E+02 0.0067 25.1 11.7 20 44-66 30-50 (192)
294 3b2e_E Golgi to ER traffic pro 44.9 6.5 0.00022 30.6 0.0 58 120-189 20-77 (84)
295 1ez3_A Syntaxin-1A; three heli 38.4 1.4E+02 0.0047 23.2 13.9 24 123-146 46-69 (127)
296 3uul_A Utrophin; spectrin repe 38.3 1.2E+02 0.0041 22.5 11.0 18 205-222 83-100 (118)
297 3uun_A Dystrophin; triple heli 38.3 1.2E+02 0.0041 22.5 10.9 6 174-179 87-92 (119)
298 3nmd_A CGMP dependent protein 38.3 59 0.002 24.5 5.2 10 150-159 56-65 (72)
299 2d4y_A HAP1, flagellar HOOK-as 38.0 1.4E+02 0.0049 28.7 9.5 75 133-209 70-145 (463)
300 2wt7_B Transcription factor MA 37.8 52 0.0018 25.7 5.1 36 58-93 49-84 (90)
301 2zuo_A MVP, major vault protei 37.8 4.1E+02 0.014 28.5 18.1 29 64-92 666-695 (861)
302 2wt7_A Proto-oncogene protein 37.7 1.1E+02 0.0037 21.8 6.5 19 169-187 41-59 (63)
303 3ra3_B P2F; coiled coil domain 37.4 16 0.00056 22.3 1.6 25 59-83 2-26 (28)
304 3m9b_A Proteasome-associated A 37.1 40 0.0014 31.0 5.0 39 59-97 56-94 (251)
305 3f1i_H Hepatocyte growth facto 37.0 1.6E+02 0.0053 23.4 9.1 74 105-186 20-93 (98)
306 4dyl_A Tyrosine-protein kinase 37.0 2.8E+02 0.0094 26.3 17.0 20 62-81 77-96 (406)
307 1ik9_A DNA repair protein XRCC 36.9 2.2E+02 0.0075 25.1 12.7 15 186-200 181-195 (213)
308 1bf5_A Signal transducer and a 36.7 1.9E+02 0.0064 29.6 10.3 102 98-215 4-107 (575)
309 1dh3_A Transcription factor CR 36.5 63 0.0022 22.6 5.0 36 120-155 15-50 (55)
310 2q6q_A Spindle POLE BODY compo 36.4 87 0.003 23.5 5.8 29 73-101 5-33 (74)
311 2d4x_A Flagellar HOOK-associat 36.4 1.5E+02 0.0053 25.8 8.7 42 112-153 11-52 (248)
312 3edu_A Beta-I spectrin, spectr 36.0 1.9E+02 0.0066 24.2 20.6 153 68-223 38-203 (218)
313 1sfc_A VAMP 2, protein (synapt 36.0 1.5E+02 0.0051 22.9 7.6 34 105-138 50-83 (96)
314 4b6x_A AVRRPS4, avirulence pro 35.8 1.1E+02 0.0037 23.7 6.4 33 150-187 38-70 (90)
315 3ajw_A Flagellar FLIJ protein; 35.7 1.6E+02 0.0056 23.2 15.2 10 173-182 96-105 (150)
316 1bg1_A Protein (transcription 35.6 3.8E+02 0.013 27.5 13.8 38 125-162 70-107 (596)
317 1jnm_A Proto-oncogene C-JUN; B 35.6 25 0.00087 25.0 2.8 27 56-82 28-54 (62)
318 2zvf_A Alanyl-tRNA synthetase; 35.2 73 0.0025 26.2 6.0 32 196-227 28-59 (171)
319 2lem_A Apolipoprotein A-I; lip 35.1 50 0.0017 28.9 5.2 24 216-240 166-189 (216)
320 2bsg_A Fibritin; viral protein 34.9 3.6E+02 0.012 27.0 11.8 97 128-224 95-222 (487)
321 3abh_A Pacsin2, protein kinase 34.7 2.5E+02 0.0085 25.0 17.6 19 75-93 85-103 (312)
322 3cl3_D NF-kappa-B essential mo 34.3 56 0.0019 27.2 5.0 16 172-187 62-77 (130)
323 1y1u_A Signal transducer and a 34.0 2.8E+02 0.0097 28.3 11.1 31 132-162 88-118 (585)
324 2pih_A Protein YMCA; regulate 33.9 2E+02 0.0068 23.7 9.7 31 108-139 71-101 (151)
325 2zxx_A Geminin; coiled-coil, c 33.8 39 0.0013 25.9 3.7 41 63-103 33-73 (79)
326 1fzc_A Fibrin; blood coagulati 33.6 33 0.0011 26.7 3.3 42 183-224 4-45 (87)
327 1y1u_A Signal transducer and a 32.8 84 0.0029 32.2 7.0 33 122-154 21-53 (585)
328 1abz_A Alpha-T-alpha, ATA; de 32.7 18 0.00062 23.8 1.4 21 104-124 11-31 (40)
329 4fla_A Regulation of nuclear P 31.7 2.3E+02 0.0079 23.8 9.6 108 57-165 25-141 (152)
330 3pwx_A Putative flagellar HOOK 31.7 2.7E+02 0.0092 24.5 10.2 44 112-155 13-56 (239)
331 3q0x_A Centriole protein; cent 31.5 1.3E+02 0.0043 27.2 7.3 35 125-159 176-210 (228)
332 2aze_A Transcription factor DP 31.1 1.5E+02 0.0051 25.3 7.3 46 172-218 5-50 (155)
333 3a2a_A Voltage-gated hydrogen 30.3 1.2E+02 0.0041 21.8 5.5 37 188-224 13-49 (58)
334 1hci_A Alpha-actinin 2; triple 30.2 3.4E+02 0.012 25.3 19.2 34 68-101 169-202 (476)
335 1yzm_A FYVE-finger-containing 30.2 1.4E+02 0.0049 20.9 6.2 43 177-221 7-49 (51)
336 2lf0_A Uncharacterized protein 30.1 53 0.0018 27.1 4.1 8 126-133 9-16 (123)
337 2w6b_A RHO guanine nucleotide 30.1 1.2E+02 0.0041 21.7 5.4 28 66-93 5-32 (56)
338 1kd8_A GABH AIV, GCN4 acid bas 30.0 1.2E+02 0.0041 19.9 5.0 29 130-158 4-32 (36)
339 3ajw_A Flagellar FLIJ protein; 29.8 2.1E+02 0.007 22.6 15.1 42 168-209 77-118 (150)
340 2b5u_A Colicin E3; high resolu 29.3 4.6E+02 0.016 26.5 12.4 91 147-237 296-386 (551)
341 2l7b_A Apolipoprotein E, APO-E 28.9 2.6E+02 0.0089 26.0 9.3 135 86-227 63-204 (307)
342 1t6f_A Geminin; coiled-coil, c 28.8 92 0.0031 20.5 4.3 28 119-146 6-33 (37)
343 3htk_A Structural maintenance 28.6 1.4E+02 0.0049 20.4 7.5 24 203-226 29-52 (60)
344 3cve_A Homer protein homolog 1 28.6 1.8E+02 0.0063 21.7 10.9 29 131-159 39-67 (72)
345 3hd7_A Vesicle-associated memb 28.6 1.9E+02 0.0066 21.9 7.6 35 104-138 24-58 (91)
346 2nrj_A HBL B protein; enteroto 28.5 3.7E+02 0.013 25.1 13.0 20 163-182 174-193 (346)
347 3l4f_A RHO guanine nucleotide 28.2 1.4E+02 0.0048 21.8 5.7 34 122-159 9-42 (61)
348 1u4q_A Spectrin alpha chain, b 28.1 3E+02 0.01 24.0 19.3 20 205-224 292-311 (322)
349 1kd8_B GABH BLL, GCN4 acid bas 28.0 1.3E+02 0.0045 19.7 5.4 28 131-158 5-32 (36)
350 3vmx_A Voltage-gated hydrogen 27.9 1.1E+02 0.0038 21.3 4.8 35 59-93 6-40 (48)
351 2xcs_B DNA gyrase subunit B, D 27.8 1.5E+02 0.0051 31.0 8.0 21 104-124 571-591 (692)
352 3ck6_A Putative membrane trans 27.7 1.7E+02 0.0059 25.2 7.4 42 99-143 206-247 (252)
353 1gmj_A ATPase inhibitor; coile 27.7 2E+02 0.0068 22.2 6.8 14 173-186 59-72 (84)
354 2a01_A Apolipoprotein A-I; fou 27.6 3.2E+02 0.011 24.1 12.9 154 68-232 52-216 (243)
355 2l5g_B Putative uncharacterize 27.6 73 0.0025 21.7 3.7 23 207-229 9-31 (42)
356 2l6f_A Focal adhesion kinase 1 33.6 13 0.00044 33.5 0.0 27 277-303 173-199 (215)
357 3t98_B Nucleoporin NUP58/NUP45 27.5 2.2E+02 0.0074 22.1 9.0 72 110-187 12-87 (93)
358 3k8w_A Flagellin homolog; flag 27.4 3.9E+02 0.013 25.3 10.2 27 112-138 31-57 (326)
359 4fm3_A Uncharacterized hypothe 27.3 2.3E+02 0.0079 22.4 10.7 29 150-181 66-94 (98)
360 2d1l_A Metastasis suppressor p 27.2 3.5E+02 0.012 24.5 16.6 125 107-231 84-238 (253)
361 3lnn_A Membrane fusion protein 27.1 82 0.0028 28.6 5.4 23 205-227 134-156 (359)
362 3q0x_A Centriole protein; cent 27.0 1.3E+02 0.0046 27.1 6.6 9 153-161 183-191 (228)
363 1s35_A Beta-I spectrin, spectr 26.7 2.7E+02 0.0091 22.9 21.7 117 67-189 36-157 (214)
364 4h22_A Leucine-rich repeat fli 26.4 2.5E+02 0.0085 22.4 9.1 27 106-132 51-77 (103)
365 1txp_A HnRNP C, heterogeneous 26.2 68 0.0023 20.0 3.1 19 123-141 2-20 (28)
366 2oee_A UPF0342 protein YHEA; M 26.1 2.3E+02 0.0077 21.9 9.9 52 107-160 4-55 (117)
367 3viq_A SWI5-dependent recombin 26.0 76 0.0026 25.9 4.4 34 169-202 11-44 (122)
368 1uix_A RHO-associated kinase; 25.9 2.1E+02 0.0071 21.4 10.0 30 133-162 3-32 (71)
369 3cl3_D NF-kappa-B essential mo 25.9 2E+02 0.0068 23.9 6.9 68 128-195 10-78 (130)
370 1qvr_A CLPB protein; coiled co 25.7 5.7E+02 0.019 26.4 12.1 27 166-192 431-457 (854)
371 1gmj_A ATPase inhibitor; coile 25.7 2.1E+02 0.007 22.1 6.5 23 139-161 42-64 (84)
372 3v1a_A Computational design, M 25.6 1.7E+02 0.0058 20.3 5.5 39 179-219 8-46 (48)
373 2qag_B Septin-6, protein NEDD5 25.6 15 0.0005 36.0 0.0 52 102-159 325-377 (427)
374 3ter_A Mammalian stromal inter 25.3 1.5E+02 0.0053 24.8 6.2 52 179-230 59-120 (136)
375 4b6x_A AVRRPS4, avirulence pro 24.7 2.4E+02 0.0083 21.8 8.3 47 173-222 37-84 (90)
376 3etw_A Adhesin A; antiparallel 24.7 2.8E+02 0.0097 22.5 13.7 13 78-90 9-21 (119)
377 1a93_B MAX protein, coiled coi 24.6 88 0.003 20.3 3.6 19 180-198 8-26 (34)
378 3v47_C Flagellin; innate immun 24.5 1.8E+02 0.0061 28.6 7.5 46 112-157 10-55 (425)
379 2xzr_A Immunoglobulin-binding 24.5 2.7E+02 0.0092 22.2 16.1 55 174-228 50-104 (114)
380 3d5a_X RF1, peptide chain rele 24.5 2.8E+02 0.0096 26.5 8.7 84 146-229 1-91 (354)
381 3plt_A Sphingolipid long chain 24.3 4E+02 0.014 24.1 19.9 61 99-163 86-146 (234)
382 3gp4_A Transcriptional regulat 24.3 2.8E+02 0.0097 22.4 8.3 61 104-164 64-125 (142)
383 1dn1_B Syntaxin 1A, syntaxin b 24.0 3.9E+02 0.013 23.9 10.8 107 109-215 24-147 (267)
384 3hd7_B Syntaxin-1A; membrane p 24.0 2.6E+02 0.0088 21.8 8.3 30 198-227 47-76 (109)
385 2zvf_A Alanyl-tRNA synthetase; 23.9 97 0.0033 25.4 4.8 16 145-160 29-44 (171)
386 3a6m_A Protein GRPE, HSP-70 co 23.8 61 0.0021 28.0 3.6 33 104-139 34-66 (177)
387 1z0k_B FYVE-finger-containing 23.7 1.4E+02 0.0047 22.3 5.0 23 198-220 44-66 (69)
388 2inr_A DNA topoisomerase 4 sub 23.6 3.1E+02 0.01 27.6 9.1 17 105-121 389-405 (514)
389 2y3a_B Phosphatidylinositol 3- 23.6 2E+02 0.0067 26.8 7.3 105 121-229 12-133 (302)
390 3edv_A Spectrin beta chain, br 23.5 3.7E+02 0.013 23.5 20.6 32 68-99 43-75 (323)
391 1g6u_A Domain swapped dimer; d 23.5 1.8E+02 0.006 19.7 6.3 10 124-133 4-13 (48)
392 3s84_A Apolipoprotein A-IV; fo 23.4 4.2E+02 0.014 24.0 22.2 15 73-87 68-82 (273)
393 3pik_A Cation efflux system pr 23.4 4.2E+02 0.014 24.0 11.5 44 76-119 123-166 (446)
394 1gl2_A Endobrevin; membrane pr 23.3 2E+02 0.0069 20.4 6.1 34 104-137 28-61 (65)
395 2j5u_A MREC protein; bacterial 23.1 22 0.00075 32.2 0.7 12 175-186 46-57 (255)
396 2kk9_A M protein, serotype 5; 23.1 4.5 0.00015 29.3 -3.1 47 119-168 7-53 (56)
397 2py8_A Hypothetical protein RB 23.0 2.1E+02 0.0072 24.2 6.7 58 59-118 57-115 (147)
398 1lrz_A FEMA, factor essential 22.9 2.8E+02 0.0096 26.1 8.5 54 167-221 249-302 (426)
399 1fio_A SSO1 protein; four heli 22.9 3.2E+02 0.011 22.6 13.1 18 144-161 87-104 (196)
400 1ytz_I Troponin I; muscle, THI 22.8 3.1E+02 0.011 23.9 8.0 58 104-162 40-97 (182)
401 1j1d_C Troponin I, TNI; THIN f 22.7 3.3E+02 0.011 22.5 7.9 59 104-162 42-100 (133)
402 2j69_A Bacterial dynamin-like 22.7 6.1E+02 0.021 25.7 14.5 41 169-209 634-674 (695)
403 2ke4_A CDC42-interacting prote 22.5 2.8E+02 0.0095 21.6 10.2 20 206-225 61-80 (98)
404 1nfn_A Apolipoprotein E3; lipi 22.5 3.7E+02 0.012 23.0 11.7 142 68-216 32-188 (191)
405 1yc9_A VCEC, multidrug resista 22.4 4.4E+02 0.015 23.9 12.1 13 212-224 265-277 (442)
406 2vkl_A RV0948C/MT0975; helical 22.4 1.9E+02 0.0067 21.8 5.9 35 122-156 14-48 (90)
407 1ucu_A Phase 1 flagellin; flag 22.3 4.2E+02 0.014 26.0 9.8 45 111-155 49-93 (494)
408 1bb1_B Designed, thermostable 21.9 1.3E+02 0.0044 19.3 3.9 23 75-97 6-28 (36)
409 1n7s_A Vesicle-associated memb 21.9 2.1E+02 0.0072 20.0 7.6 35 104-138 23-57 (63)
410 3r6n_A Desmoplakin; spectrin r 21.8 5.6E+02 0.019 24.9 21.8 27 67-93 38-64 (450)
411 2l5g_B Putative uncharacterize 21.6 1.6E+02 0.0053 20.0 4.5 17 145-161 6-22 (42)
412 2d8d_A Aroag, phospho-2-dehydr 21.5 2.1E+02 0.0073 21.2 6.0 35 122-156 5-39 (90)
413 3ilw_A DNA gyrase subunit A; D 21.5 3.7E+02 0.013 26.7 9.2 24 103-126 349-372 (470)
414 1lwu_B Fibrinogen beta chain; 21.5 1.4E+02 0.0047 28.2 5.8 26 201-226 29-54 (323)
415 2j5u_A MREC protein; bacterial 21.4 83 0.0028 28.3 4.2 17 121-137 27-43 (255)
416 1w1w_A Structural maintenance 21.4 29 0.001 32.8 1.2 14 102-115 162-175 (430)
417 2ve7_A Kinetochore protein HEC 21.3 1.6E+02 0.0055 27.3 6.3 9 242-250 256-264 (315)
418 4b4t_K 26S protease regulatory 21.2 1.1E+02 0.0037 29.7 5.2 11 214-224 77-87 (428)
419 3i2w_A Syndapin, LD46328P; EFC 21.1 4.2E+02 0.014 23.2 12.6 20 138-157 125-144 (290)
420 2p22_C Protein SRN2; endosome, 20.8 4.1E+02 0.014 23.0 13.3 35 123-157 82-116 (192)
421 1j1e_C Troponin I, TNI; THIN f 20.7 4.2E+02 0.014 23.0 8.3 59 104-162 42-100 (180)
422 3nkz_A Flagellar protein FLIT; 20.4 3.4E+02 0.012 21.8 7.4 33 102-136 64-96 (123)
423 1dip_A Delta-sleep-inducing pe 20.3 52 0.0018 25.0 2.1 15 104-118 23-37 (78)
424 3ter_A Mammalian stromal inter 20.1 3.8E+02 0.013 22.3 10.0 67 122-189 32-107 (136)
425 3rkg_A Magnesium transporter M 20.0 4.9E+02 0.017 23.6 9.8 32 196-227 215-247 (261)
426 3m48_A General control protein 20.0 1.7E+02 0.0057 18.9 4.1 17 134-150 7-23 (33)
No 1
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=97.90 E-value=0.0012 Score=60.40 Aligned_cols=128 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh---hHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHH
Q 021465 58 EIERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTES---DSHIRVLLDKIAKMEADCKAGERLKKDLQQAHI 134 (312)
Q Consensus 58 Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~---e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~ 134 (312)
+|.+|...=..|......|+.++..++..+..+...+.+++.+. +..|..+.+++.+.+..+..+-.-| |+..+..
T Consensus 19 ~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~~~k-E~~aL~k 97 (256)
T 3na7_A 19 EIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSER-ELRSLNI 97 (256)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSS-HHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHH-HHHHHHH
Confidence 34444444444555566666666666666666655555555443 5666666677766666543222212 3444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 135 EAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 135 e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
|+..+......|-.++..++..++..+. .+..+.+.++.++.++...++.++
T Consensus 98 Eie~~~~~i~~lE~eile~~e~ie~~~~---~l~~~~~~l~~~~~~l~~~~~~~~ 149 (256)
T 3na7_A 98 EEDIAKERSNQANREIENLQNEIKRKSE---KQEDLKKEMLELEKLALELESLVE 149 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444444443 333333445555555555554444
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.61 E-value=8.9e-05 Score=80.96 Aligned_cols=40 Identities=10% Similarity=0.237 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhH
Q 021465 49 EDKIAVQAAEIERLARDNHRLAASHITMREDLAAAQQEIP 88 (312)
Q Consensus 49 E~~l~~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq 88 (312)
+++|..-..++.++-..-..|......|++++..++.+++
T Consensus 863 ~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~~L~ 902 (1184)
T 1i84_S 863 DEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQ 902 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333344444444444444443
No 3
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.58 E-value=7.2e-05 Score=81.65 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHH
Q 021465 49 EDKIAVQAAEIERLARDNHRLAASHITMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 49 E~~l~~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~ 92 (312)
+.++.....++..|-..=.++......++..+..+++++..+..
T Consensus 856 ~~El~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~ 899 (1184)
T 1i84_S 856 EEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQE 899 (1184)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445444444444444444444555555555544443
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=97.58 E-value=0.0012 Score=71.90 Aligned_cols=120 Identities=10% Similarity=0.145 Sum_probs=33.2
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHH
Q 021465 62 LARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLAR 141 (312)
Q Consensus 62 L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~ 141 (312)
|...|..|......|++.|.....+...|...+..++...+.++-+| +.++...+.+.+|+.+++.++.+|..
T Consensus 919 l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~~e~~~L-------~~~l~~le~~~~e~~~~~~~v~~L~~ 991 (1080)
T 2dfs_A 919 YKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKL-------RSDVERLRMSEEEAKNATNRVLSLQE 991 (1080)
T ss_dssp --------------------------------CHHHHHHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555555555555555555555555444443333333333333 33333333333333333333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHH
Q 021465 142 ARQELTSKIQQASEALHKARLEVKNL-PDLHAELDSLRQEHRRLRATF 188 (312)
Q Consensus 142 ~rqeL~aevq~l~~EL~r~kad~qql-~alraELe~LrqElq~~Raai 188 (312)
.-.+|..+++.+.+|....+...+++ ..|...+..|++|.+.+|..+
T Consensus 992 e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~ 1039 (1080)
T 2dfs_A 992 EIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEK 1039 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333332221111 233344445555555555543
No 5
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=97.50 E-value=0.011 Score=53.97 Aligned_cols=42 Identities=24% Similarity=0.256 Sum_probs=22.2
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhc
Q 021465 58 EIERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHT 99 (312)
Q Consensus 58 Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~a 99 (312)
++|.|...=.+|......|..+|..++.++..+...+..+++
T Consensus 12 ~LQ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~ 53 (256)
T 3na7_A 12 EISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEE 53 (256)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344454444555555555555555555555555554444444
No 6
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=97.31 E-value=0.014 Score=69.62 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=57.0
Q ss_pred hhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 021465 95 RNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAEL 174 (312)
Q Consensus 95 ~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraEL 174 (312)
..++.|-..+--+|.+|....|..|..+..=+++.++.+.++++....-++-.++++..+.+.++.=+++.=..-+|+++
T Consensus 1937 ~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~~~~ae~~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l 2016 (3245)
T 3vkg_A 1937 KDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEV 2016 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHH
Confidence 34444444444455555555554444444444444444444433333323333333333333222111111112344555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 175 DSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 175 e~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
..+.+++..+++.+..-++.-.++-++++.++.++....+|.++|+.++...+
T Consensus 2017 ~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~ 2069 (3245)
T 3vkg_A 2017 EQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVK 2069 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555554444444444444555555555555555555555554444
No 7
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=97.14 E-value=0.061 Score=64.41 Aligned_cols=76 Identities=11% Similarity=0.123 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 149 KIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 149 evq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
++..+.++|+..++ ++.+.+++|..+.+++..+++.++.-.++...+-.+++..++.|..-.+=+..|-.|-.++.
T Consensus 2015 ~l~~ae~~l~~~~~---~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~ 2090 (3245)
T 3vkg_A 2015 EVEQLENAANELKL---KQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWE 2090 (3245)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHH
Confidence 34445555555554 45556666666666666666666665666666666666666666665555555555554443
No 8
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=97.12 E-value=0.0037 Score=62.11 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=21.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 197 DNVEQLQAMEKNLVGMAREMEKLHAEVVNAEMRG 230 (312)
Q Consensus 197 elleq~qaMEknL~~marEvekLrAEIanaekra 230 (312)
++-.+.+.+++.+.++.+|..+++++|...+.+.
T Consensus 548 ~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 548 ALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333445556666666777777777777766554
No 9
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=97.07 E-value=0.0093 Score=59.17 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHH
Q 021465 169 DLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKN 208 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEkn 208 (312)
+.+.+++.+++|..+.+..++..|+..+++-+++....++
T Consensus 534 ~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~ 573 (597)
T 3oja_B 534 AKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQK 573 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 3335555555566666665555555555444444443333
No 10
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=96.99 E-value=0.19 Score=48.96 Aligned_cols=49 Identities=8% Similarity=0.156 Sum_probs=28.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHH
Q 021465 66 NHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERL 125 (312)
Q Consensus 66 NqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~l 125 (312)
|+.|......|++.|... .+...+....++.+++...+-.+....++..
T Consensus 62 er~~~~rIe~L~~~L~~~-----------s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~ 110 (390)
T 1deq_A 62 DQDFTSRINKLRDSLFNY-----------QKNSKDSNTLTKNIVELMRGDFAKANNNDNT 110 (390)
T ss_pred hhhHHHHHHHHHHHHHHH-----------HHhhhHHHHHHHHHHHHHHHHHHhhccchHH
Confidence 455555555555555443 3334455567888887777766666555544
No 11
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=96.91 E-value=0.027 Score=61.38 Aligned_cols=15 Identities=27% Similarity=0.494 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHHH
Q 021465 145 ELTSKIQQASEALHK 159 (312)
Q Consensus 145 eL~aevq~l~~EL~r 159 (312)
+|..++..+++++.+
T Consensus 988 ~L~~e~~~l~~~~~~ 1002 (1080)
T 2dfs_A 988 SLQEEIAKLRKELHQ 1002 (1080)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 12
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=96.65 E-value=0.19 Score=43.94 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHhhhhhHhh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 101 SDSHIRVLLDKIAKMEADC----KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 101 ~e~qiR~L~ek~~k~Eael----ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
.|...|+|-++...++..- +.+-.|...|.+.|.+-......-.+|...++.|..||.+.+.
T Consensus 46 ~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~ 111 (168)
T 3o0z_A 46 LESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKH 111 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666655432 2333344455555555554444445555566666666665554
No 13
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.43 E-value=0.32 Score=43.24 Aligned_cols=147 Identities=14% Similarity=0.223 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQ 152 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~ 152 (312)
....++.+..++.|+.-....-..+.+|-|.++..+..+...+... +..|+.|++..+...+. ...+....+..
T Consensus 19 ~~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~---~~~L~~E~e~~k~K~~~---~~~e~~~~~~~ 92 (189)
T 2v71_A 19 SMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQAD---NQRLKYEVEALKEKLEH---QYAQSYKQVSV 92 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 3456788899999999998888889998888888888887776643 34566666666655443 33344445555
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH----HHHHHHhhcHHhHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 021465 153 ASEALHKARLEVKNLPDLHAELDSLRQEHRRLRA----TFEYEKGLNIDNVEQLQAMEKNLVGMA---REMEKLHAEVVN 225 (312)
Q Consensus 153 l~~EL~r~kad~qql~alraELe~LrqElq~~Ra----aiE~EKk~~~elleq~qaMEknL~~ma---rEvekLrAEIan 225 (312)
|..+|...+..+..+-.-..+|+.....+++... +++.--..+...|+...-++..|++-. .+++.|+-|+..
T Consensus 93 Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~EKe~l~~~~QRLkdE~rD 172 (189)
T 2v71_A 93 LEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARD 172 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555444444444555555555554433 333334444555666655555555422 244455555543
No 14
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=96.27 E-value=0.38 Score=39.71 Aligned_cols=111 Identities=15% Similarity=0.298 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Q 021465 103 SHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHR 182 (312)
Q Consensus 103 ~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq 182 (312)
.+|+.+.+.+.++...+...+..+.+|+. ...+|.....+|..+++.-+.-+..+.. ....+.+.-..|...+.
T Consensus 13 ~E~~~~~eel~~lke~l~k~e~~r~ele~---~~~~l~~Ek~~L~~qL~~E~~~l~e~EE---~~~~L~~~k~eLe~~l~ 86 (129)
T 2fxo_A 13 KEMASMKEEFTRLKEALEKSEARRKELEE---KMVSLLQEKNDLQLQVQAEQDNLADAEE---RCDQLIKNKIQLEAKVK 86 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHH
Confidence 35555555555555555444444444432 2344455555555555555444443332 11222222223334444
Q ss_pred HHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHH
Q 021465 183 RLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKL 219 (312)
Q Consensus 183 ~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekL 219 (312)
.+...++.+...+.++...-+.++.++..+...++.+
T Consensus 87 el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 87 EMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666666666666666665555555554
No 15
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=96.16 E-value=0.59 Score=40.83 Aligned_cols=124 Identities=16% Similarity=0.214 Sum_probs=88.0
Q ss_pred hhhhhchhhHHHHHHHHHhhhhhHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 021465 94 IRNIHTESDSHIRVLLDKIAKMEADCK-AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHA 172 (312)
Q Consensus 94 ~~~~~ae~e~qiR~L~ek~~k~Eaelr-a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alra 172 (312)
...+++|.|. ..|..|.-+|++ ....+..-+..++..+..|...+..|-.++..|...|...+.+-.+...+.+
T Consensus 19 n~kLk~EsE~-----~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~ 93 (168)
T 3o0z_A 19 NDLLRTESDT-----AVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIG 93 (168)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666643 456777777875 5566666777778888888899999999999999999888877766666555
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHH----HHHHHHHHH
Q 021465 173 ----ELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMA----REMEKLHAE 222 (312)
Q Consensus 173 ----ELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~ma----rEvekLrAE 222 (312)
-+..|..|+.+.+.....-...+..+.+.+-.+||...++. =++..|..-
T Consensus 94 elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~ 151 (168)
T 3o0z_A 94 DLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQR 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45778899999988876666666666666666666666555 444444433
No 16
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=95.83 E-value=0.21 Score=40.93 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=20.0
Q ss_pred hhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 115 MEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 115 ~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
.|.++.....+..++.-+|.++....-.+-+|-.+++.|+.||.
T Consensus 57 yE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~ 100 (119)
T 3ol1_A 57 LQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA 100 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 33344333444444444444444444444444444444444443
No 17
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.71 E-value=0.71 Score=38.06 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH-
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL- 202 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~- 202 (312)
.+..++.+++..+.+....|++|-.+...+..+...++..++.--..-++.+.+..-+...+..++...+.-.+.+++.
T Consensus 17 ~~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeee 96 (129)
T 2fxo_A 17 SMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEE 96 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777777777777777777777777777777666654433344445666666666666666666655555555554
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 ---QAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 203 ---qaMEknL~~marEvekLrAEIanae 227 (312)
..+...--.+..++..|+.+|...+
T Consensus 97 e~~~~L~~~kkkle~e~~~Lk~~led~e 124 (129)
T 2fxo_A 97 EMNAELTAKKRKLEDECSELKRDIDDLE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334446666666665443
No 18
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=95.54 E-value=0.31 Score=39.90 Aligned_cols=68 Identities=24% Similarity=0.275 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKG 193 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk 193 (312)
+.++..++..|.....-.+.|+.+-.++..+++++...-- .--.|...+++|+.|+.-+|.-.+.|.+
T Consensus 44 dn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l---~r~dLE~~iesL~eEl~FLKk~heeEl~ 111 (119)
T 3ol1_A 44 DNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASL---ARLDLERKVESLQEEIAFLKKLHEEEIQ 111 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555566777788888888888765442 1233445556666666555555554443
No 19
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=95.45 E-value=0.11 Score=52.69 Aligned_cols=52 Identities=23% Similarity=0.335 Sum_probs=34.2
Q ss_pred HHHHHHHHHH-HHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHR-RLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 173 ELe~LrqElq-~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
+.+....|+- .+|..|+|-|..-..++.++++++++|..+..+|+||+-.|.
T Consensus 103 dNdNtynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 103 NRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444 556666666666666667777777777777777777777776
No 20
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=95.38 E-value=0.21 Score=40.81 Aligned_cols=65 Identities=20% Similarity=0.315 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHH
Q 021465 148 SKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKL 219 (312)
Q Consensus 148 aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekL 219 (312)
.++..+++++.+.+.++ ..|.-|++.+.-.+..|+.|+..+..+-+....++.++..+.+++.+|
T Consensus 45 ~~idelk~ei~q~~~~l-------E~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 45 ELIDKLKEEAEQHKIVM-------ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp HHHHHHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 33445555666555444 446667777778888888888888887777777777777777766554
No 21
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=95.20 E-value=0.01 Score=50.75 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
++.+|...+...+++.+.-+.|.+++..+..+++++..++|..++.| .+|+.++...|.+
T Consensus 71 l~rdleasr~akk~~ea~la~l~~~~~~LeAE~aKLeEekQIseASR---qgLrRDLeASReA 130 (146)
T 2xnx_M 71 ITREQEINRNLLGNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASR---QSLRRDLDASREA 130 (146)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTC--------------------
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHHHH---HHHHHHHHHHHHH
Confidence 33444444444444444444555566667777777777777666666 4566677666665
No 22
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=95.08 E-value=0.94 Score=35.84 Aligned_cols=87 Identities=20% Similarity=0.280 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHH
Q 021465 131 QAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLV 210 (312)
Q Consensus 131 q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~ 210 (312)
.+..+++.|...-..|+.++..+.++=+.+.. +|.++.++.+.+.++=...-..+-.-+....+..++++..+..|.
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~---el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~ 84 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNRKVVAE---NLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMR 84 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444455555555444444332 233333444444332222222222223333445555566666666
Q ss_pred HHHHHHHHHH
Q 021465 211 GMAREMEKLH 220 (312)
Q Consensus 211 ~marEvekLr 220 (312)
--...+++|+
T Consensus 85 ~~~~qLdkL~ 94 (96)
T 3q8t_A 85 YAQMQLDKLK 94 (96)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 6666777765
No 23
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.78 E-value=0.62 Score=39.23 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=40.9
Q ss_pred chhhHHHHHHHHH--hhhhhHhhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Q 021465 99 TESDSHIRVLLDK--IAKMEADCKAG---ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAE 173 (312)
Q Consensus 99 ae~e~qiR~L~ek--~~k~Eaelra~---e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraE 173 (312)
..-|.+|+++..+ ...+..+-.++ =.+=.|+.+++.+...|...-+++..++..++.+|...+. +++.++.+
T Consensus 35 ~~vd~km~ei~~~~~~~~l~~~r~aVLaALNiadEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~---k~e~~~~e 111 (138)
T 3hnw_A 35 SYINNKITEFNKEESYRRMSAELRTDMMYLNIADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQI---KAESSAKE 111 (138)
T ss_dssp HHHHHHHHHHTTCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 3345567777633 55554432111 1234466666666666655555555555555555555443 33334444
Q ss_pred HHHHHHHHHHH
Q 021465 174 LDSLRQEHRRL 184 (312)
Q Consensus 174 Le~LrqElq~~ 184 (312)
++.+++++..+
T Consensus 112 ~~~l~~~~~~l 122 (138)
T 3hnw_A 112 IKELKSEINKY 122 (138)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444333333
No 24
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=94.77 E-value=0.89 Score=36.75 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEA-LHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQ 203 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E-L~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~q 203 (312)
+-+.|-..++-...+...+++|..++..+..+ ..+.+..+.+|+.++.||+.-+.|++.++.+++.-......+..++.
T Consensus 13 ~~KqL~~~~q~~~e~e~~k~eL~~~~~~~~~~~~~k~~eq~~~le~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~~~ 92 (107)
T 2no2_A 13 VTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQSEANWAAEFA 92 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456666666666667777777777776533 35566667788888888888888888888876665555555555554
Q ss_pred HHHHHHHHH
Q 021465 204 AMEKNLVGM 212 (312)
Q Consensus 204 aMEknL~~m 212 (312)
...+..+.+
T Consensus 93 ~l~~Ek~~L 101 (107)
T 2no2_A 93 ELEKERDSL 101 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 25
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=94.67 E-value=0.21 Score=50.60 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=45.8
Q ss_pred HhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 021465 93 HIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHA 172 (312)
Q Consensus 93 ~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alra 172 (312)
.+.+-..+.+..++.+++...+ .+.+....-..+...-.+|-..++-|+.+|...- ++|-+|+.
T Consensus 75 dlsKnsKdseqy~k~~~E~Lr~-------------rq~q~~dNdNtynE~S~ELRRrIqyLKekVdnQl---snIrvLQs 138 (562)
T 3ghg_A 75 EYQKNNKDSHSLTTNIMEILRG-------------DFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEKV---QHIQLLQK 138 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSS-------------HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred HHHhhchhHHHHHHHHHHHHHH-------------HHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 3344455556667766665433 2222221111222233345555556666665443 36777778
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHRRLRATFEY 190 (312)
Q Consensus 173 ELe~LrqElq~~RaaiE~ 190 (312)
-|+.++.+++++..+|+-
T Consensus 139 nLedq~~kIQRLEvDIdi 156 (562)
T 3ghg_A 139 NVRAQLVDMKRLEVDIDI 156 (562)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888888887665
No 26
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=93.86 E-value=1.3 Score=36.58 Aligned_cols=53 Identities=26% Similarity=0.346 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
++.|++-|...++-.|+ .-++|-.|++.|.+.|..+. +|++.||.+.+.+...
T Consensus 55 V~tL~~SL~~ekaq~q~---~vqeLqgEI~~Lnq~Lq~a~----------ae~erlr~~~~~~~~r 107 (121)
T 3mq7_A 55 VMALMASLDAEKAQGQK---KVEELEGEITTLNHKLQDAS----------AEVERLRRENQVLSVR 107 (121)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----------HHHHHHHhhchhhhhH
Confidence 34455555544443322 23444455555555444444 4555555555544444
No 27
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=93.81 E-value=1.8 Score=43.46 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH--
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL-- 202 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~-- 202 (312)
...+|...+.|+-+.....+++.+.++.-..|+.... .++++|.+.+++.-..+++.+|.+++.+.+-++.-
T Consensus 7 yq~~la~yq~elarvqkana~aka~Ye~~~ae~~a~n------~~i~aeNeaikkrNa~aka~Ye~~l~kY~~dlakY~~ 80 (497)
T 3iox_A 7 YQAKLTAYQTELARVQKANADAKAAYEAAVAANNAAN------AALTAENTAIKKRNADAKADYEAKLAKYQADLAKYQK 80 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777777777777666665544 35678888999888888888888888877777655
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 203 --QAMEKNLVGMAREMEKLHAEVVNAEMR 229 (312)
Q Consensus 203 --qaMEknL~~marEvekLrAEIanaekr 229 (312)
..+++.|.....+..++.++++.+++.
T Consensus 81 ~~AeY~~kl~aYe~~~~~~~k~lae~ek~ 109 (497)
T 3iox_A 81 DLADYPVKLKAYEDEQTSIKAALAELEKH 109 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 667777888888888888888887753
No 28
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=93.74 E-value=2.1 Score=34.18 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQ 203 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~q 203 (312)
+|.++++.+|.++..|.........++..|+.+|.+.+. .-...-.+...+.+|++.+=++ +.++..
T Consensus 2 ~~~~~~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~---~R~~aE~~~~~ie~ElEeLTas----------LFeEAN 68 (97)
T 2eqb_B 2 PLGSNYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENE---LRTKAEEEADKLNKEVEDLTAS----------LFDEAN 68 (97)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH----------HHHHHH
T ss_pred cHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH----------HHHHHH
Confidence 345566677777777777777788888888888877774 1122223333344444444443 333332
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHHH
Q 021465 204 AM----EKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 204 aM----EknL~~marEvekLrAEIana 226 (312)
.| .+.-.......++|+++|...
T Consensus 69 ~MVa~ar~e~~~~e~kn~~L~~qL~d~ 95 (97)
T 2eqb_B 69 NMVADARKEKYAIEILNKRLTEQLREK 95 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 22 333444555777787777653
No 29
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.59 E-value=1 Score=37.10 Aligned_cols=19 Identities=16% Similarity=0.508 Sum_probs=4.3
Q ss_pred HHHHHHHhHHHHHHhhhhh
Q 021465 80 LAAAQQEIPRIKAHIRNIH 98 (312)
Q Consensus 80 L~aaq~Elq~L~~~~~~~~ 98 (312)
|..++.||..|+..|..++
T Consensus 33 l~~~k~Ei~elrr~iq~L~ 51 (131)
T 3tnu_A 33 VQSGKSEISELRRTMQNLE 51 (131)
T ss_dssp --------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333444444444333333
No 30
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=93.50 E-value=0.52 Score=36.63 Aligned_cols=50 Identities=18% Similarity=0.249 Sum_probs=37.3
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
-.|.|.|+.....+..++.-+|.++..+.-.+-+|-+++..|+.||.=.+
T Consensus 34 k~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~fLk 83 (86)
T 3swk_A 34 REKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLK 83 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44667777777777778888888888888888888888888877776544
No 31
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=93.46 E-value=0.24 Score=38.45 Aligned_cols=48 Identities=10% Similarity=0.256 Sum_probs=32.7
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 113 AKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKA 160 (312)
Q Consensus 113 ~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ 160 (312)
..+|+|+++-+.+..||.++|.+...+.+.-++--.+.+.|..||.+.
T Consensus 17 SALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l 64 (81)
T 1wt6_A 17 EALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQL 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347889999999999999999888887764444444444444443333
No 32
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.24 E-value=1.3 Score=36.42 Aligned_cols=6 Identities=17% Similarity=0.462 Sum_probs=0.0
Q ss_pred HHHHhh
Q 021465 57 AEIERL 62 (312)
Q Consensus 57 ~Ei~~L 62 (312)
.|++..
T Consensus 18 eel~~~ 23 (129)
T 3tnu_B 18 EELQQT 23 (129)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 333333
No 33
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=93.15 E-value=2.3 Score=41.00 Aligned_cols=76 Identities=17% Similarity=0.258 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 145 ELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 145 eL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
+...-.+-|++.|.+.+. .++.+++.-..-..-...++.++|.++.... ..+++.|..+..+..+++.++++|.
T Consensus 394 e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 394 EARNVTHLLQQELTEAQK---GFQDVEAQAATANHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhh---hHHHHHHHhhhcchhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566677777774 5566666666666777777777776665522 4667778888888888888888887
Q ss_pred HH
Q 021465 225 NA 226 (312)
Q Consensus 225 na 226 (312)
+.
T Consensus 468 ~~ 469 (471)
T 3mq9_A 468 RL 469 (471)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 34
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=93.00 E-value=2.8 Score=33.24 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
++|..+..++.+......--..+-.++..+...
T Consensus 6 aIKkKm~~lk~e~e~a~drae~~e~~~k~~e~~ 38 (101)
T 3u1c_A 6 AIKKKMQMLKLDKENALDRAEQAEADKKAAEER 38 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444443333333333333333333
No 35
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.98 E-value=0.85 Score=38.38 Aligned_cols=64 Identities=14% Similarity=0.170 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHH
Q 021465 146 LTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGM 212 (312)
Q Consensus 146 L~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~m 212 (312)
+..++-.++++....+. ++..+..|+..|+.|+..++-.++.-++...++-++.+..+++++.+
T Consensus 66 iadEl~k~~~~~~~L~~---~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 66 IADDYFKAKKMADSLSL---DIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444443 44555566666666666666555554444444444444444443333
No 36
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=92.95 E-value=1.7 Score=42.43 Aligned_cols=41 Identities=7% Similarity=0.074 Sum_probs=22.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAME 206 (312)
Q Consensus 166 ql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaME 206 (312)
.|-.|+.-|+.++-+++++...|++-+.-=.--....=+++
T Consensus 135 ~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~C~~sC~~~l~~~ 175 (390)
T 1deq_A 135 RINLLQKNVRDQLVDMKRLEVDIDIKIRSCKGSCSRALEHK 175 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhh
Confidence 55566666666666666666666555444333333333333
No 37
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=92.72 E-value=0.25 Score=35.22 Aligned_cols=43 Identities=28% Similarity=0.376 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHH
Q 021465 49 EDKIAVQAAEIERLARDNHRLAASHITMREDLAAAQQEIPRIK 91 (312)
Q Consensus 49 E~~l~~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~ 91 (312)
|+++.....++..|..-|.+|+.++..-+++|..++.+|.+|.
T Consensus 8 ~~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~La 50 (51)
T 3m91_A 8 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 50 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8898888899999999999999999999999999999988873
No 38
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=92.33 E-value=2.5 Score=34.65 Aligned_cols=18 Identities=6% Similarity=-0.081 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHhhcHHh
Q 021465 181 HRRLRATFEYEKGLNIDN 198 (312)
Q Consensus 181 lq~~RaaiE~EKk~~~el 198 (312)
+...+.+++.|..+|-.+
T Consensus 108 LlnvKl~Ld~EIatYRkL 125 (129)
T 3tnu_B 108 LMNTKLALDVEIATYRKL 125 (129)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 333344444444444333
No 39
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=92.25 E-value=6.2 Score=35.46 Aligned_cols=156 Identities=10% Similarity=0.136 Sum_probs=70.1
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhh-HHHHHHHHHhhhhh----HhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNIHTESD-SHIRVLLDKIAKME----ADCKAGERLKKDLQQAHIEAQSLARAR 143 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e-~qiR~L~ek~~k~E----aelra~e~lk~EL~q~r~e~q~L~~~r 143 (312)
+-..|..++.+|.+.+..+..|......+....- .....+..+...+. .-......-+..|++.. +.+.|...-
T Consensus 150 l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~-~~~~F~~~~ 228 (323)
T 3edv_A 150 LQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTG-DKFRFFSMV 228 (323)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 3445666677777776666666665555543221 01122222222221 11223333344455444 355666666
Q ss_pred HHHHHHHHHHHHHHHHHH--HhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH----HHHHHHHHHHHHHHH
Q 021465 144 QELTSKIQQASEALHKAR--LEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL----QAMEKNLVGMAREME 217 (312)
Q Consensus 144 qeL~aevq~l~~EL~r~k--ad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~----qaMEknL~~marEve 217 (312)
.+|..=+......|.... .|+..++.+....+.++.|+...+..|+.-...-..++... ..+...|..+....+
T Consensus 229 ~~l~~Wl~~~~~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L~~~w~ 308 (323)
T 3edv_A 229 RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRK 308 (323)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Confidence 666666665555554211 12222233333334444444444443333222222222211 445556666666666
Q ss_pred HHHHHHHH
Q 021465 218 KLHAEVVN 225 (312)
Q Consensus 218 kLrAEIan 225 (312)
+|......
T Consensus 309 ~l~~~w~~ 316 (323)
T 3edv_A 309 EMIDKWED 316 (323)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555443
No 40
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=92.20 E-value=5.1 Score=34.41 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhhhhchh
Q 021465 74 ITMREDLAAAQQEIPRIKAHIRNIHTES 101 (312)
Q Consensus 74 ~~L~qeL~aaq~Elq~L~~~~~~~~ae~ 101 (312)
..|..+|..+.++|..+..-+..+...+
T Consensus 16 s~LeD~L~~~R~el~~~~~ri~~lE~~r 43 (154)
T 2ocy_A 16 SHLEEQLNKSLKTIASQKAAIENYNQLK 43 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777776666444444433
No 41
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=92.15 E-value=1.5 Score=34.00 Aligned_cols=66 Identities=24% Similarity=0.326 Sum_probs=42.1
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Q 021465 113 AKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRL 184 (312)
Q Consensus 113 ~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~ 184 (312)
++++.++ +.++..++..|.....=.+.|+.+-+++..+++++..+-- .--.|.+.+++|+.||.=+
T Consensus 17 ~~l~~e~---dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l---~r~dLE~kvesL~eEl~fL 82 (86)
T 3swk_A 17 ARVEVER---DNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASL---ARLDLERKVESLQEEIAFL 82 (86)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 4444443 4567777777777777777888888888888888866543 2234445555665555433
No 42
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=91.95 E-value=6.3 Score=34.90 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=44.0
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLE-VKNLPDLHAELDSLRQEHR 182 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad-~qql~alraELe~LrqElq 182 (312)
..-++.+-+.-||++| -++|.++....+.|...-..|..++...+..+...+.+ ..++..|..+|..++.+..
T Consensus 32 El~EFqesSrELE~EL------E~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~ 105 (189)
T 2v71_A 32 ELVEFQEGSRELEAEL------EAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKE 105 (189)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777777788655 34444444444445555455555555555555444432 2245666666666666666
Q ss_pred HHHHHH
Q 021465 183 RLRATF 188 (312)
Q Consensus 183 ~~Raai 188 (312)
.++..|
T Consensus 106 ~l~~~i 111 (189)
T 2v71_A 106 QLHKYV 111 (189)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666553
No 43
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=91.73 E-value=2.5 Score=34.59 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=55.7
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
|-...+.|+.+|..+..|-..|......-+.++..||-+|.+++...|..|.. |++-..| .+.+...
T Consensus 11 lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~---Lqq~fsq----------~q~~vq~ 77 (112)
T 1x79_B 11 LQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEE---LQQGLSQ----------AKRDVQE 77 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH----------HHHHHHH
Confidence 33445667777777777777777778888888899999999999888876642 3333333 3334445
Q ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 021465 149 KIQQASEALHKARLEVKNLPDLHAELDSLR 178 (312)
Q Consensus 149 evq~l~~EL~r~kad~qql~alraELe~Lr 178 (312)
+++.|+.+-.+... +|..|..|-+.|.
T Consensus 78 qL~~Lt~~Re~V~~---eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 78 QMAVLMQSREQVSE---ELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHT---C------------
T ss_pred HHHHHHHHHHHHHH---HHHHHHhhccchh
Confidence 66666666666653 4555555555544
No 44
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=91.70 E-value=2.5 Score=32.37 Aligned_cols=67 Identities=15% Similarity=0.273 Sum_probs=42.2
Q ss_pred HHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 89 RIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 89 ~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
.|...+.++..-.+.++..+-.++..+|++|. .+|.++..--.|-|.|...+-.|-.++..-++-|+
T Consensus 12 sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~---~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLLE 78 (84)
T 1gk4_A 12 SLERQMREMEENFAVEAANYQDTIGRLQDEIQ---NMKEEMARHLREYQDLLNVKMALDIEIATYRKLLE 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHc
Confidence 33444445555556667777777777776553 36666666666777777777777777666666554
No 45
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=91.67 E-value=4.1 Score=32.12 Aligned_cols=39 Identities=10% Similarity=0.196 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+.+..+|..++.+...|...-.....++..+..++....
T Consensus 35 ~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~ 73 (96)
T 3q8t_A 35 KVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELD 73 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555444444444444444433
No 46
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=91.59 E-value=3.8 Score=33.44 Aligned_cols=47 Identities=19% Similarity=0.142 Sum_probs=19.0
Q ss_pred hhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 115 MEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 115 ~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
.++++--++-||+.+.--+.|-..=-+.|..+..+...|..+|+.++
T Consensus 57 ~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq 103 (110)
T 2v4h_A 57 HKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQ 103 (110)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHH
Confidence 33344334444444444444433333333334444444444443333
No 47
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=91.59 E-value=6.9 Score=39.04 Aligned_cols=98 Identities=10% Similarity=0.108 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQ 203 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~q 203 (312)
.++..|++++-.+++|...-.+-..-++.++..+...+. +++.+..-|.....++++.+..|+.-.. ...-.+++
T Consensus 97 ~V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~---Qi~en~n~~~~~~~~~e~~~~~i~~~~~--~~~~~~i~ 171 (464)
T 1m1j_B 97 TVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQK---QRKDNDIILSEYNTEMELHYNYIKDNLD--NNIPSSLR 171 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH--THHHHHHH
T ss_pred hhHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccc---cccchhhHHHHHHHHHHHHHHHHHHHHh--ccchhHHH
Confidence 345555555555555543333333333444444444442 4555555555555666655555432111 11223344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 204 AMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 204 aMEknL~~marEvekLrAEIana 226 (312)
.++..+..+...|.+|...|...
T Consensus 172 ~L~~~~~~l~~ki~~l~~~~~~~ 194 (464)
T 1m1j_B 172 VLRAVIDSLHKKIQKLENAIATQ 194 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666666667776666543
No 48
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=91.49 E-value=0.89 Score=36.21 Aligned_cols=65 Identities=20% Similarity=0.329 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 150 IQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHA 221 (312)
Q Consensus 150 vq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrA 221 (312)
+..|+.++.+.+.++ ..++-|++.+.-.+..|..|+..+..+-++...+...+..+.++..+|..
T Consensus 25 id~lke~~~q~~~~~-------E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~~L~~ 89 (94)
T 3jsv_C 25 IDKLKEEAEQHKIVM-------ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKLKV 89 (94)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666666544 55566666667777777777777766666666666666666666666654
No 49
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=91.35 E-value=4.7 Score=33.11 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcHHhH
Q 021465 169 DLHAELDSLRQEHRRLRATFEYEKGLNIDNV 199 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~EKk~~~ell 199 (312)
..+..|..|..++..+|..++.-...|.+++
T Consensus 81 ~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll 111 (131)
T 3tnu_A 81 QIQEMIGSVEEQLAQLRCEMEQQNQEYKILL 111 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555554444433443333
No 50
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=91.33 E-value=3.2 Score=41.69 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHH
Q 021465 75 TMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEA 136 (312)
Q Consensus 75 ~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~ 136 (312)
.-+-+|++-|.||-|......+++++-|.-+.+.-.+.+.++|| ++++|+.=.+++++-
T Consensus 6 ~yq~~la~yq~elarvqkana~aka~Ye~~~ae~~a~n~~i~ae---NeaikkrNa~aka~Y 64 (497)
T 3iox_A 6 DYQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAE---NTAIKKRNADAKADY 64 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999888888888877764 455554444444443
No 51
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=91.23 E-value=0.57 Score=41.66 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 47 LLEDKIAVQAAEIERLARDNHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 47 ~lE~~l~~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
.++++|..-|-.|+.|..+|.+|........+++.+++.+|+.++..
T Consensus 10 ~~q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~ 56 (190)
T 4emc_A 10 SVKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQ 56 (190)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999888773
No 52
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=90.78 E-value=1.2 Score=35.15 Aligned_cols=18 Identities=6% Similarity=0.283 Sum_probs=7.1
Q ss_pred hhhhHhhhhhHHHHHHHH
Q 021465 113 AKMEADCKAGERLKKDLQ 130 (312)
Q Consensus 113 ~k~Eaelra~e~lk~EL~ 130 (312)
..++.+++.++.+..||.
T Consensus 30 ~~l~~~~~e~~~~~~eL~ 47 (117)
T 2zqm_A 30 QKVQLELTEAKKALDEIE 47 (117)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333334444444444443
No 53
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=90.60 E-value=4 Score=35.04 Aligned_cols=43 Identities=26% Similarity=0.233 Sum_probs=25.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+.++.+++|+..++.++..+....+.|..+-+.|-+-+.+.++
T Consensus 96 K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~ 138 (152)
T 3a7p_A 96 KNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTE 138 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666666666666666666666666555544443
No 54
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=89.98 E-value=5.4 Score=31.87 Aligned_cols=18 Identities=6% Similarity=0.231 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhHHHHHH
Q 021465 76 MREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 76 L~qeL~aaq~Elq~L~~~ 93 (312)
|.++|..++++|++|...
T Consensus 3 ~~~~~e~lre~l~~le~~ 20 (97)
T 2eqb_B 3 LGSNYNQLKEDYNTLKRE 20 (97)
T ss_dssp --CCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHH
Confidence 455666666777666553
No 55
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=89.88 E-value=1.4 Score=36.40 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=24.7
Q ss_pred HHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhh
Q 021465 82 AAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCK 120 (312)
Q Consensus 82 aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelr 120 (312)
.++.||.+|+..+..|+.|.-..|..|..++..||++|-
T Consensus 19 ~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~ 57 (120)
T 3i00_A 19 RLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLA 57 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555566666677777777777776554
No 56
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=89.18 E-value=2.3 Score=37.06 Aligned_cols=23 Identities=9% Similarity=0.234 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIan 225 (312)
++..+.+..+..++...|.+..+
T Consensus 116 ~aL~~Ei~~Lr~qL~~~R~k~~~ 138 (175)
T 3lay_A 116 NAVAKEMESLGQKLDEQRVKRDV 138 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444443
No 57
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=89.17 E-value=3.1 Score=35.53 Aligned_cols=22 Identities=9% Similarity=0.324 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIa 224 (312)
+...++|+.....-.++.++++
T Consensus 118 qgLrRDLeASReAKKqlEadl~ 139 (146)
T 2xnx_M 118 QSLRRDLDASREAKKQVEKDLL 139 (146)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555444444444444443
No 58
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=89.16 E-value=8.4 Score=31.77 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhh----cHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 178 RQEHRRLRATFEYEKGL----NIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEMRG 230 (312)
Q Consensus 178 rqElq~~RaaiE~EKk~----~~elleq~qaMEknL~~marEvekLrAEIanaekra 230 (312)
.+-...++++++.||.. ..++-.+++.+.++|.....++|+||++..-...|.
T Consensus 52 NqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 52 NHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 34444455555554444 344445557788888888889999998887655544
No 59
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=89.05 E-value=12 Score=35.92 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=22.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRATFEYEK 192 (312)
Q Consensus 166 ql~alraELe~LrqElq~~RaaiE~EK 192 (312)
.|.++..||-.+.++|+.+++.|+..|
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
T 3mq9_A 444 KVEELEGEITTLNHKLQDASAEVERLR 470 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 678888889999999999999887654
No 60
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=88.99 E-value=7.1 Score=30.66 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+++|..+..++.+......--..+-.++..+.....+..
T Consensus 5 d~iKkKm~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E 43 (101)
T 3u59_A 5 EAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLE 43 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 344444444444444444443444444444444433333
No 61
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=88.98 E-value=14 Score=35.58 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRATFEYEKGLNIDNVEQL----QAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 172 aELe~LrqElq~~RaaiE~EKk~~~elleq~----qaMEknL~~marEvekLrAEIana 226 (312)
...+.+.++.+..|..++.+.+...+.++++ +..++.+.....++++.++.+.++
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (487)
T 3oja_A 417 KRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQEL 475 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHH
Confidence 3344455555555555555444444444444 233333444444444444444443
No 62
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=88.91 E-value=6.2 Score=33.86 Aligned_cols=65 Identities=18% Similarity=0.106 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH
Q 021465 135 EAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL 202 (312)
Q Consensus 135 e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~ 202 (312)
.+..|......|..++..+..+|..... .++.++.|+.+|+-++-.+...+..-+++|.++++..
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K---~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RW 133 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNK---NTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARW 133 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555556666666655442 5667777888888777777777777777777777765
No 63
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=88.80 E-value=2.4 Score=32.83 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 021465 200 EQLQAMEKNLVGMAREMEKLHAEVVNAEMRGH 231 (312)
Q Consensus 200 eq~qaMEknL~~marEvekLrAEIanaekra~ 231 (312)
++.+....+-..+.++.++|+.|..+++.|.+
T Consensus 41 ~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~ 72 (81)
T 2jee_A 41 QEVQNAQHQREELERENNHLKEQQNGWQERLQ 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444455566666666665555543
No 64
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=88.70 E-value=3 Score=32.79 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIanae 227 (312)
+.+++++..+..++++++..|....
T Consensus 87 ~~le~~~~~l~~~l~~lk~~l~~~~ 111 (117)
T 2zqm_A 87 NALERQEKKLNEKLKELTAQIQSAL 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666666666666666544
No 65
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=88.63 E-value=6.4 Score=40.18 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhh---HHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhH
Q 021465 47 LLEDKIAVQAAEIERLARDNHRLAAS---HITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGE 123 (312)
Q Consensus 47 ~lE~~l~~q~~Ei~~L~~dNqrLa~t---h~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e 123 (312)
+|.+.|......-..++--++.|... ....+..=.++++|.+.|.......+.--+.|-|.+.+.+..|+ +
T Consensus 460 vl~~fl~~~~~~~~~ilq~d~~l~~~~k~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~ql~------~ 533 (592)
T 1f5n_A 460 ILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLT------E 533 (592)
T ss_dssp HHHHHHHHTHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------H
Confidence 77777777777766676555555442 22233344455666666666555555555666666666666655 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSL 139 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L 139 (312)
.|..|-.+...|.+++
T Consensus 534 kme~~~~~~~~e~~~~ 549 (592)
T 1f5n_A 534 KMENDRVQLLKEQERT 549 (592)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444444444443
No 66
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=88.43 E-value=11 Score=32.25 Aligned_cols=81 Identities=15% Similarity=0.142 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 144 QELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEV 223 (312)
Q Consensus 144 qeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEI 223 (312)
..+-.++..|+..|..+.. ..+..-..+..|.+++.++-..+..+|..+....+.+...-..|.+|..-.-.|.-+|
T Consensus 73 d~yEeqIk~L~~kLKEAE~---RAE~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~ 149 (155)
T 2efr_A 73 DKYEEEIKVLSDKLKEAET---RAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEV 149 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 3444555555555544332 2233445566777888888888888888888888888666677777777777777777
Q ss_pred HHHH
Q 021465 224 VNAE 227 (312)
Q Consensus 224 anae 227 (312)
++..
T Consensus 150 ~~~~ 153 (155)
T 2efr_A 150 ARLK 153 (155)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 6654
No 67
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=87.94 E-value=6.7 Score=32.04 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQ 201 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq 201 (312)
.+.|..++.|++-++.++...+++|....+.-+.+=.+ ++-.|..-++.-.+.|..+|.+|.--+..-.++|.+
T Consensus 8 ~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~------qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~ 81 (112)
T 1x79_B 8 VKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSH------QISALVLRAQASEILLEELQQGLSQAKRDVQEQMAV 81 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777888888888888888888776655554332 666777777777777777777766555544444443
Q ss_pred H
Q 021465 202 L 202 (312)
Q Consensus 202 ~ 202 (312)
+
T Consensus 82 L 82 (112)
T 1x79_B 82 L 82 (112)
T ss_dssp H
T ss_pred H
Confidence 3
No 68
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=87.92 E-value=2.3 Score=33.60 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 77 REDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 77 ~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
+..|+.++-....|...+.+++..-+.+++.+-.++..+|++|. .+|.++..--.|-|.|...+-.|-.++..-++-
T Consensus 11 ~~~~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~---~~r~e~~~ql~EYq~LlnvKl~Le~EIatYrkL 87 (95)
T 3mov_A 11 ENLYFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMA---EIRDQMQQQLNDYEQLLDVKLALDMEISAYRKL 87 (95)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555666666666677777777766666553 245555555555566666665555555555544
Q ss_pred H
Q 021465 157 L 157 (312)
Q Consensus 157 L 157 (312)
|
T Consensus 88 L 88 (95)
T 3mov_A 88 L 88 (95)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=87.91 E-value=6.8 Score=30.62 Aligned_cols=33 Identities=6% Similarity=0.262 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 127 KDLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 127 ~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
.++..+|..+..+...+..|..++..+..++.+
T Consensus 56 ~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~ 88 (93)
T 3s4r_A 56 EEMRELRRQVDQLTNDKARVEVERDNLAEDIMR 88 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444333
No 70
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=87.68 E-value=3.7 Score=31.63 Aligned_cols=52 Identities=19% Similarity=0.167 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
++..+-.++..+|++|. .+|.++..--.|-|.|...+-.|-.++..-++-|+
T Consensus 29 ~l~~~q~~i~~lE~el~---~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLE 80 (86)
T 1x8y_A 29 ERDTSRRLLAEKEREMA---EMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 80 (86)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHc
Confidence 33344444444444432 24555555555555555555555555555555554
No 71
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=87.54 E-value=1.4 Score=38.49 Aligned_cols=21 Identities=24% Similarity=0.360 Sum_probs=9.4
Q ss_pred cchhHHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRA 186 (312)
Q Consensus 166 ql~alraELe~LrqElq~~Ra 186 (312)
+|.++..||..|++++...|.
T Consensus 114 kI~aL~~Ei~~Lr~qL~~~R~ 134 (175)
T 3lay_A 114 KINAVAKEMESLGQKLDEQRV 134 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444443
No 72
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=87.38 E-value=7.5 Score=30.00 Aligned_cols=38 Identities=13% Similarity=0.062 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+..++.+++..+.+....+++|-.+...+.++...+..
T Consensus 19 ~eeel~~lke~l~k~e~~rkele~~~~~l~~ek~~L~~ 56 (89)
T 3bas_A 19 QLKQMDKMKEDLAKTERIKKELEEQNVTLLEQKNDLFG 56 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555555555544443
No 73
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=87.38 E-value=1.8 Score=30.87 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 146 LTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 146 L~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
|..+|+.|...+..++. ++.+++.++...+.|..|+-.+|+
T Consensus 9 Lss~V~~L~~kVdqLss---dV~al~~~v~~ak~eA~RAN~RlD 49 (52)
T 1jcd_A 9 ASSDAQTANAKADQASN---DANAARSDAQAAKDDAARANQRAD 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444444444443 334455666677777777777665
No 74
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=87.37 E-value=21 Score=36.34 Aligned_cols=63 Identities=17% Similarity=0.266 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH-HHHHHHHHHHHH-----------------------HHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL-QAMEKNLVGMAR-----------------------EMEKLHAEV 223 (312)
Q Consensus 168 ~alraELe~LrqElq~~RaaiE~EKk~~~elleq~-qaMEknL~~mar-----------------------EvekLrAEI 223 (312)
++.+++.+.|.+-.......++..++.+.+++.|+ +.||++...+-+ ++++|..||
T Consensus 497 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei 576 (592)
T 1f5n_A 497 ESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEI 576 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666555666666777778888888886 224433322222 566677777
Q ss_pred HHHHHhc
Q 021465 224 VNAEMRG 230 (312)
Q Consensus 224 anaekra 230 (312)
.+..++.
T Consensus 577 ~~l~~~~ 583 (592)
T 1f5n_A 577 QDLQTKM 583 (592)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 7766653
No 75
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=86.89 E-value=9.9 Score=30.06 Aligned_cols=19 Identities=5% Similarity=0.104 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLA 140 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~ 140 (312)
++.++.++..++..+.+|.
T Consensus 14 v~~I~~~i~~i~~~v~~l~ 32 (127)
T 1ez3_A 14 VEEIRGFIDKIAENVEEVK 32 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444433
No 76
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=86.69 E-value=5.9 Score=31.02 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
++.++.++.+++.++.+|.....++..++..+.+.|.....
T Consensus 5 ~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~~ 45 (112)
T 1l8d_A 5 LEELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKK 45 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45566677777777777777777777777777777766553
No 77
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=86.67 E-value=13 Score=31.14 Aligned_cols=56 Identities=5% Similarity=0.102 Sum_probs=39.2
Q ss_pred HHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 105 IRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 105 iR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+.+++|+...|...|+..+.++ .+.+++..++. ...-+.|+.+.+.+++++...+.
T Consensus 6 ~~~I~d~A~eL~~aI~eseeyk-~yk~A~~~i~~-D~eaq~li~eF~~~Q~~~~~~q~ 61 (151)
T 2pih_A 6 KKDIVQQARNLAKMISETEEVD-FFKRAEAQINE-NDKVSTIVNQIKALQKQAVNLKH 61 (151)
T ss_dssp HHHHHHHHHHHHHHHTTBHHHH-HHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCHHHH-HHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888888888888 66666666653 33345566777777777766654
No 78
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=86.55 E-value=9.6 Score=30.25 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=20.9
Q ss_pred HhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 111 KIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 111 k~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
.+.+.++++--++-||+.+.--+.|-+.=-+.|..+..+...+..+|..++
T Consensus 31 ~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq 81 (94)
T 3jsv_C 31 EAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQ 81 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 344444444444445544444444433333333333333333333333333
No 79
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=86.43 E-value=15 Score=35.92 Aligned_cols=15 Identities=13% Similarity=-0.084 Sum_probs=5.7
Q ss_pred hHHHHHHHHHHHHHH
Q 021465 169 DLHAELDSLRQEHRR 183 (312)
Q Consensus 169 alraELe~LrqElq~ 183 (312)
.+....+.+++++..
T Consensus 289 ~l~~~~~~~~~~l~~ 303 (517)
T 4ad8_A 289 DVVEFGAQAAEELAG 303 (517)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333334444333
No 80
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=86.18 E-value=12 Score=30.10 Aligned_cols=29 Identities=28% Similarity=0.283 Sum_probs=15.8
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLA 140 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~ 140 (312)
..|++.....++.++.+|..-..|++.|.
T Consensus 46 ~~k~~eq~~~le~lk~eL~~~~~el~~lq 74 (107)
T 2no2_A 46 QRKTQEQLEVLESLKQELATSQRELQVLQ 74 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566666666555555533
No 81
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=86.01 E-value=17 Score=36.31 Aligned_cols=50 Identities=16% Similarity=0.206 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 177 LRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 177 LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIana 226 (312)
..+-...+|..|+|-|..-..++..++.+..+|..+..+|++|+-.|.-.
T Consensus 109 ~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q 158 (491)
T 1m1j_A 109 YGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIK 158 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667777778777778888888999999999999999999988843
No 82
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=85.37 E-value=3.7 Score=31.49 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=10.7
Q ss_pred HHHHhhhhhhhhhhhhH
Q 021465 57 AEIERLARDNHRLAASH 73 (312)
Q Consensus 57 ~Ei~~L~~dNqrLa~th 73 (312)
.|++.|+.+|..|-.|+
T Consensus 9 kevEnLi~EN~eLl~TK 25 (77)
T 2w83_C 9 REVENLILENTQLLETK 25 (77)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666666666666666
No 83
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=85.36 E-value=0.57 Score=47.62 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=14.4
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHhhhhhch
Q 021465 71 ASHITMREDLAAAQQEIPRIKAHIRNIHTE 100 (312)
Q Consensus 71 ~th~~L~qeL~aaq~Elq~L~~~~~~~~ae 100 (312)
..+..++|==+.|++|=.+-...-..+..|
T Consensus 297 ~d~~e~qqm~~~a~e~~~~~~~e~~~l~~~ 326 (575)
T 2i1j_A 297 PDTIDVQQMKAQAREEKLAKQAQREKLQLE 326 (575)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555544444433344333
No 84
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=85.33 E-value=5.8 Score=30.61 Aligned_cols=21 Identities=5% Similarity=0.390 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEV 223 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEI 223 (312)
+.+++++..+..++++++..|
T Consensus 82 ~~le~~~~~~~~~l~~lk~~l 102 (107)
T 1fxk_A 82 KTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555554444
No 85
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=85.16 E-value=20 Score=31.89 Aligned_cols=18 Identities=17% Similarity=0.265 Sum_probs=8.1
Q ss_pred hhhhhhhhhhHHHHHHHH
Q 021465 63 ARDNHRLAASHITMREDL 80 (312)
Q Consensus 63 ~~dNqrLa~th~~L~qeL 80 (312)
+.+..+++..|..+-+.|
T Consensus 75 l~~~e~~a~~h~~~a~~L 92 (301)
T 2efk_A 75 LQEVNDFAGQRELVAENL 92 (301)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444454444444
No 86
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=85.08 E-value=7.4 Score=31.97 Aligned_cols=72 Identities=21% Similarity=0.238 Sum_probs=33.7
Q ss_pred hhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Q 021465 97 IHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDS 176 (312)
Q Consensus 97 ~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~ 176 (312)
...++|.+|..|. +.++.||.+|+.++.|.|.... .|...|-.|..||+..+. ..-..+.|.+.
T Consensus 9 ~~d~rD~~Ie~Lk----------reie~lk~ele~l~~E~q~~v~---ql~~~i~~Le~eL~e~r~---~~q~a~~e~e~ 72 (120)
T 3i00_A 9 NKDEKDHLIERLY----------REISGLKAQLENMKTESQRVVL---QLKGHVSELEADLAEQQH---LRQQAADDCEF 72 (120)
T ss_dssp -CCTHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCCcHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 4455665554433 3346666666666666665433 233444444445444432 22223344444
Q ss_pred HHHHHHHH
Q 021465 177 LRQEHRRL 184 (312)
Q Consensus 177 LrqElq~~ 184 (312)
|+.|++.+
T Consensus 73 Lr~e~~~l 80 (120)
T 3i00_A 73 LRAELDEL 80 (120)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 87
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=84.99 E-value=8.3 Score=38.61 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQA 153 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l 153 (312)
.+-.+-.+..++..+++.|.+.|+.++.++..+
T Consensus 71 ~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~ 103 (501)
T 1wle_A 71 GIISTWQELRQLREQIRSLEEEKEAVTEAVRAL 103 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555566666666666666665543
No 88
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=84.91 E-value=12 Score=29.18 Aligned_cols=84 Identities=13% Similarity=0.213 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhhhhch-hhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q 021465 74 ITMREDLAAAQQEIPRIKAHIRNIHTE-SDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSL---ARARQELTSK 149 (312)
Q Consensus 74 ~~L~qeL~aaq~Elq~L~~~~~~~~ae-~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L---~~~rqeL~ae 149 (312)
...+++...+..+|...-..+..+..| +-..|+.+.. .++-...=|.|...|++.+ .+.|..+.++
T Consensus 4 ~~YE~df~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~----------~ldEA~ell~qMelE~~~~~~p~~~R~~~~~k 73 (97)
T 3onj_A 4 ISYESDFKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQ----------QQDELFDLLDQMDVEVNNSIGDASERATYKAK 73 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345677888888888777666655433 2222222222 2234444567778888888 2678999999
Q ss_pred HHHHHHHHHH-HHHhcccc
Q 021465 150 IQQASEALHK-ARLEVKNL 167 (312)
Q Consensus 150 vq~l~~EL~r-~kad~qql 167 (312)
+..-+.+|.+ .+.+++++
T Consensus 74 lr~Yk~dl~~~lk~~lk~l 92 (97)
T 3onj_A 74 LREWKKTIQSDIKRPLQSL 92 (97)
T ss_dssp HHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999988 88655544
No 89
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=84.80 E-value=15 Score=30.20 Aligned_cols=39 Identities=26% Similarity=0.254 Sum_probs=24.8
Q ss_pred HHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HhccCCC
Q 021465 196 IDNVEQL-QAMEKNLVGMAREMEKLHAEVVNAE--MRGHAPN 234 (312)
Q Consensus 196 ~elleq~-qaMEknL~~marEvekLrAEIanae--kra~a~~ 234 (312)
-+.+.++ +.|++-+-.+..++.+...-|-+.+ ++.|.||
T Consensus 70 k~~y~~l~k~Y~~~~keLd~~ik~qekiIdnFE~ik~lr~gn 111 (119)
T 3etw_A 70 KSQYQELASKYEDALKKLEAEMEQQKAVISDFEKIQALRAGN 111 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444444 5556666666667777777777777 6666665
No 90
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=84.62 E-value=1.2 Score=41.08 Aligned_cols=44 Identities=27% Similarity=0.366 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHH
Q 021465 49 EDKIAVQAAEIERLARDNHRLAASHITMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 49 E~~l~~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~ 92 (312)
|+++..-..++..|..-|.+|.+++..++++|..+++||.+|..
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88888889999999999999999999999999999999999864
No 91
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=84.57 E-value=9.7 Score=30.05 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhh-h-chhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNI-H-TESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLA-RARQELTSK 149 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~-~-ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~-~~rqeL~ae 149 (312)
....+++...+..+|.+.-..+... - .++...||++.... +-...=|.|...|++.+- +.|..+.++
T Consensus 17 Fe~YE~df~~l~~~i~~kl~~i~~~~~~e~rk~~i~~ie~~l----------dEA~eLl~qMelE~r~~p~s~R~~~~~k 86 (102)
T 2qyw_A 17 FEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQ----------QEANETLAEMEEELRYAPLTFRNPMMSK 86 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556777777777777766655433 2 23333333333222 333334555566666653 457888888
Q ss_pred HHHHHHHHHHHHHhc
Q 021465 150 IQQASEALHKARLEV 164 (312)
Q Consensus 150 vq~l~~EL~r~kad~ 164 (312)
+..-+.+|.+.+.|+
T Consensus 87 lr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 87 LRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 888888888877644
No 92
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=84.57 E-value=7.2 Score=30.49 Aligned_cols=15 Identities=20% Similarity=0.220 Sum_probs=8.3
Q ss_pred HHHHHHHhhhhhHhh
Q 021465 105 IRVLLDKIAKMEADC 119 (312)
Q Consensus 105 iR~L~ek~~k~Eael 119 (312)
+|.|++....||+++
T Consensus 25 VR~LEqqN~~Le~~i 39 (93)
T 3s4r_A 25 VRFLEQQNKILLAEL 39 (93)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555555544
No 93
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=83.95 E-value=20 Score=30.77 Aligned_cols=18 Identities=11% Similarity=0.228 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLH 220 (312)
Q Consensus 203 qaMEknL~~marEvekLr 220 (312)
+..+.-|.++..++..|.
T Consensus 125 ~e~~~~l~~lq~ql~~LK 142 (154)
T 2ocy_A 125 REKDTLLDTLTLQLKNLK 142 (154)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444444444443
No 94
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=83.29 E-value=13 Score=28.25 Aligned_cols=20 Identities=5% Similarity=0.061 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHhhcHHhH
Q 021465 180 EHRRLRATFEYEKGLNIDNV 199 (312)
Q Consensus 180 Elq~~RaaiE~EKk~~~ell 199 (312)
++...+.+++.|..+|-.++
T Consensus 58 ~LlnvK~~Ld~EIatYRkLL 77 (84)
T 1gk4_A 58 DLLNVKMALDIEIATYRKLL 77 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHH
Confidence 33344444555555554444
No 95
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=82.34 E-value=7.5 Score=31.14 Aligned_cols=20 Identities=15% Similarity=0.214 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021465 206 EKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 206 EknL~~marEvekLrAEIan 225 (312)
++.+..+.+|+++||.-|..
T Consensus 74 ~~~~e~Lq~E~erLr~~v~~ 93 (100)
T 1go4_E 74 REDHSQLQAECERLRGLLRA 93 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444455555544443
No 96
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=81.67 E-value=41 Score=32.83 Aligned_cols=19 Identities=5% Similarity=-0.022 Sum_probs=8.2
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 021465 167 LPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 167 l~alraELe~LrqElq~~R 185 (312)
+...|..-+...+|...++
T Consensus 152 l~KaKk~Y~~~cke~e~a~ 170 (486)
T 3haj_A 152 VEAAKKAHHAACKEEKLAI 170 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 97
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=80.62 E-value=2.2 Score=35.99 Aligned_cols=17 Identities=12% Similarity=0.309 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 145 ELTSKIQQASEALHKAR 161 (312)
Q Consensus 145 eL~aevq~l~~EL~r~k 161 (312)
.+..++..|..+|.+.+
T Consensus 43 ~~~~e~~~L~~~l~eE~ 59 (135)
T 2e7s_A 43 DRDDEVKRLREDIAKEN 59 (135)
T ss_dssp THHHHHHTHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 34444445555554444
No 98
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=80.57 E-value=14 Score=28.57 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHRRLR 185 (312)
Q Consensus 173 ELe~LrqElq~~R 185 (312)
+.+.|++|...-+
T Consensus 56 en~qLk~E~~~wq 68 (81)
T 2jee_A 56 ENNHLKEQQNGWQ 68 (81)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333433333
No 99
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=80.34 E-value=0.93 Score=38.31 Aligned_cols=19 Identities=5% Similarity=0.106 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARAR 143 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~r 143 (312)
++.+|...+..++.+...+
T Consensus 13 ~r~~l~~~~~~~~~le~l~ 31 (135)
T 2e7s_A 13 SLKTIASQKAAIENYNQLK 31 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555555544433
No 100
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=79.91 E-value=25 Score=34.42 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 200 EQLQAMEKNLVGMAREMEKLHAEVVNAEMRG 230 (312)
Q Consensus 200 eq~qaMEknL~~marEvekLrAEIanaekra 230 (312)
.+++.++..+.++...++.|+..|...+.+.
T Consensus 105 ~~i~~l~~~~~~~~~~i~~l~~~i~~l~~~~ 135 (409)
T 1m1j_C 105 NTIQQLTDMHIMNSNKITQLKQKIAQLESHC 135 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 4455666666677777777777777666443
No 101
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=79.88 E-value=2.6 Score=33.48 Aligned_cols=58 Identities=14% Similarity=0.135 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEY 190 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~ 190 (312)
....++.|+.+++.|.....++|+ .++-..+++.+.++. .||+.+++++...|+.|+.
T Consensus 24 ~~~~lk~E~~~lk~E~~stSaQDe--FAKWaKL~Rk~DKl~----------~ele~l~~~l~~~k~~F~~ 81 (93)
T 3sjb_C 24 KYLAKVKERHELKEFNNSISAQDN--YAKWTKNNRKLDSLD----------KEINNLKDEIQSENKAFQA 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTTC--HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccchHHH--HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHH
Confidence 335567777777777776666554 455666666665554 7888888888888888764
No 102
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=78.88 E-value=8.2 Score=34.23 Aligned_cols=35 Identities=14% Similarity=0.304 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEAL 157 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL 157 (312)
..++..|...+..|++|+++-..|..++....+|+
T Consensus 9 ~~~q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei 43 (190)
T 4emc_A 9 NSVKQQIDSADLLVANLVNENFVLSEKLDTKATEI 43 (190)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777777776666655555555433333
No 103
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=78.60 E-value=8.8 Score=30.21 Aligned_cols=21 Identities=5% Similarity=0.059 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHhhcHHhH
Q 021465 179 QEHRRLRATFEYEKGLNIDNV 199 (312)
Q Consensus 179 qElq~~RaaiE~EKk~~~ell 199 (312)
+++...+..++.|..+|-.++
T Consensus 68 q~LlnvKl~Le~EIatYrkLL 88 (95)
T 3mov_A 68 EQLLDVKLALDMEISAYRKLL 88 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666665555554
No 104
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=78.39 E-value=36 Score=30.16 Aligned_cols=12 Identities=25% Similarity=0.368 Sum_probs=4.7
Q ss_pred hhhhhhHHHHHH
Q 021465 67 HRLAASHITMRE 78 (312)
Q Consensus 67 qrLa~th~~L~q 78 (312)
.+++..|..+-+
T Consensus 86 e~~a~~h~~~a~ 97 (305)
T 2efl_A 86 NDYAGQHEVISE 97 (305)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444433333
No 105
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=78.23 E-value=2.5 Score=33.53 Aligned_cols=59 Identities=15% Similarity=0.259 Sum_probs=37.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHH--HHHHHhhcHHhHHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRAT--FEYEKGLNIDNVEQLQAMEKNLVGMA-----------REMEKLHAEVVN 225 (312)
Q Consensus 166 ql~alraELe~LrqElq~~Raa--iE~EKk~~~elleq~qaMEknL~~ma-----------rEvekLrAEIan 225 (312)
=|+++|+|.+.+.+|....+.. -+||.|- ..++.+++.+.+.+-.|. .||..||.||.+
T Consensus 15 LLD~ir~Efe~~~~e~~~~k~q~~~eyE~ki-~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe~ 86 (92)
T 3vp9_A 15 LLDAIRQEFLQVSQEANTYRLQNQKDYDFKM-NQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQ 86 (92)
T ss_dssp --CCTTTTTTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788888888888776644 3677774 556666655555544443 366677776653
No 106
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=78.01 E-value=7.3 Score=28.06 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=26.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhH
Q 021465 167 LPDLHAELDSLRQEHRRLRATFEYEKGLNIDNV 199 (312)
Q Consensus 167 l~alraELe~LrqElq~~RaaiE~EKk~~~ell 199 (312)
+=+|+.++..|++|..+...++|.|.+++-++-
T Consensus 12 VYaLkDqV~eL~qe~k~m~k~lEeEqkARk~LE 44 (56)
T 2w6b_A 12 VYALKDEVQELRQDNKKMKKSLEEEQRARKDLE 44 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888888888988888876543
No 107
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=77.91 E-value=30 Score=34.02 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=20.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 196 IDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 196 ~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
.+++++++.+...+..+..++.++..+|...-
T Consensus 72 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (455)
T 2dq0_A 72 DELLAKSREIVKRIGELENEVEELKKKIDYYL 103 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666677777777777776533
No 108
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=77.11 E-value=45 Score=33.65 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhc-HHhHHHHHHHHHHHHH
Q 021465 133 HIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLN-IDNVEQLQAMEKNLVG 211 (312)
Q Consensus 133 r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~-~elleq~qaMEknL~~ 211 (312)
..-++.+...-++=..+++.|.+-|.+... -....-+.=++.+|+-++.++.+||.|+.+- .|-++|.-.|-.++.+
T Consensus 152 ekAl~s~~~i~~~e~~~l~~L~~AL~kE~~--~Rt~dE~~mi~~yr~k~~aL~~aIe~Er~~~~EEAIqe~~dmsaeI~E 229 (526)
T 3iyk_A 152 NKAVTSYNKILTEEDLQMRRLATALQKEIG--ERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMTADVLE 229 (526)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--hhcHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcchHHHHH
Confidence 333444444444444445555555544433 2333444556888889999999999887765 5566777666666655
Q ss_pred HHH-HHHHHHHHHHHHHHhccC
Q 021465 212 MAR-EMEKLHAEVVNAEMRGHA 232 (312)
Q Consensus 212 mar-EvekLrAEIanaekra~a 232 (312)
-+. ||.=+-+-+++.-.-+||
T Consensus 230 ~AaeEVP~vGag~At~iATaRa 251 (526)
T 3iyk_A 230 AASEEVPLIGAGMATAVATGRA 251 (526)
T ss_pred HHhhhCCcchHHHHHHHHHHHH
Confidence 444 555555666665555554
No 109
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=76.96 E-value=7.1 Score=35.93 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021465 208 NLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 208 nL~~marEvekLrAEIanae 227 (312)
++.....+++.+++++..++
T Consensus 130 ~~~~~~~~l~~~~~~l~~a~ 149 (369)
T 4dk0_A 130 EMDVVQENIKQAEIEVNTAE 149 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344445555555555555
No 110
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=76.75 E-value=23 Score=27.11 Aligned_cols=28 Identities=7% Similarity=0.163 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVNAEMRG 230 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIanaekra 230 (312)
..++..+.++...++.++.++..++...
T Consensus 75 e~i~~~i~~le~~~~~~~~~l~~lk~~l 102 (107)
T 1fxk_A 75 ETLQLREKTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777777777777777666543
No 111
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=76.25 E-value=36 Score=29.11 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=24.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhc
Q 021465 67 HRLAASHITMREDLAAAQQEIPRIKAHIRNIHT 99 (312)
Q Consensus 67 qrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~a 99 (312)
+.|-..|..|+++|.+-+..|..|......+..
T Consensus 41 e~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~ 73 (210)
T 3pdy_A 41 EAQLGSHRGLHQSIEEFRAKIERARSDEGQLSP 73 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 556677888888888888888888776655543
No 112
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=76.23 E-value=3.7 Score=26.08 Aligned_cols=26 Identities=23% Similarity=0.447 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhhh
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNIH 98 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~~ 98 (312)
..+|+|++++++.||-.|.-.|..++
T Consensus 4 iaalkqeiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 4 IAALKQEIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888877776555544
No 113
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=76.10 E-value=24 Score=26.99 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=35.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
+.+|.|-.|=.|+..---.|..++.+|+++|..|+.|-.-.+ .|++++++-..+++..
T Consensus 9 kevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~----------~El~s~~~~~~r~~~r 66 (77)
T 2w83_C 9 REVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQ----------GELEAVKQAKLKLEEK 66 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH----------HHHHHHHHHHHHHHHH
Confidence 444555555555555556677788888888887777654444 5555555554444443
No 114
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=76.04 E-value=9.9 Score=30.27 Aligned_cols=52 Identities=15% Similarity=0.212 Sum_probs=32.9
Q ss_pred HHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHH
Q 021465 89 RIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLA 140 (312)
Q Consensus 89 ~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~ 140 (312)
+|.........|-+.+|..|..++.+||.-.+..-.||....-+..|+..|.
T Consensus 40 rLc~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~ 91 (96)
T 1t3j_A 40 RLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFS 91 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4445555556666667777777777777666666666666665555555544
No 115
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=75.99 E-value=70 Score=32.28 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=15.6
Q ss_pred HHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 161 RLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 161 kad~qql~alraELe~LrqElq~~Raa 187 (312)
+.|.+-+...|.-+++|++-++.-|.+
T Consensus 185 ~dE~~mi~~yr~k~~aL~~aIe~Er~~ 211 (526)
T 3iyk_A 185 HAETVMVKEYRDKIDALKNAIEVERDG 211 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 333345566666666666666555554
No 116
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=75.87 E-value=26 Score=33.19 Aligned_cols=70 Identities=9% Similarity=0.119 Sum_probs=45.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhh----hhhHHHHHHHHHHHHHHH
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADC----KAGERLKKDLQQAHIEAQ 137 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eael----ra~e~lk~EL~q~r~e~q 137 (312)
-|...+..|+.++..-|+..+.+...+.+++..-+...+.|....-.+..-| -.++.|++++++++.+++
T Consensus 120 ~l~~~L~~L~~~i~~~q~~~~~~~~~L~~F~~~l~~d~~~f~~~~~~l~~~L~~~~~~I~~Lq~eI~~l~~~I~ 193 (346)
T 2nrj_A 120 TLKEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVLGSVN 193 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHhHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 4555666677777777777777777777777776666666666666555444 334566767776665555
No 117
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=75.61 E-value=9.6 Score=37.12 Aligned_cols=31 Identities=6% Similarity=0.059 Sum_probs=20.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 197 DNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 197 elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
+++++++.+...+..+..++.++..+|...-
T Consensus 68 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (421)
T 1ses_A 68 ALIARGKALGEEAKRLEEALREKEARLEALL 98 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666677777777777776543
No 118
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=75.58 E-value=12 Score=28.27 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=23.2
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 62 LARDNHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 62 L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
+..+|..|..+...|+.+|.+-.+||++|...
T Consensus 9 ~~~~~~~~~~~l~~Lr~eL~~Ke~eI~~L~e~ 40 (75)
T 3a7o_A 9 IVSHDDALLNTLAILQKELKSKEQEIRRLKEV 40 (75)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777778888888888888888888663
No 119
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=75.51 E-value=17 Score=28.08 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+|..+.....+++......++|..+++.+++++...+
T Consensus 36 vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq 72 (81)
T 1wt6_A 36 IRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQ 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444455555666666666665544
No 120
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=75.36 E-value=39 Score=33.71 Aligned_cols=31 Identities=3% Similarity=0.069 Sum_probs=20.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 196 IDNVEQLQAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 196 ~elleq~qaMEknL~~marEvekLrAEIana 226 (312)
.+++++++.+...+..+..++.++..+|...
T Consensus 74 ~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~ 104 (485)
T 3qne_A 74 KDLIAEKEKLSNEKKEIIEKEAEADKNLRSK 104 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666777777777777643
No 121
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=75.12 E-value=18 Score=27.71 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHhhcHHhHH
Q 021465 179 QEHRRLRATFEYEKGLNIDNVE 200 (312)
Q Consensus 179 qElq~~RaaiE~EKk~~~elle 200 (312)
+++...+.++|.|..+|-.+++
T Consensus 59 q~LlnvK~~Le~EIatYRkLLE 80 (86)
T 1x8y_A 59 QELLDIKLALDMEIHAYRKLLE 80 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHc
Confidence 3344455556666666555554
No 122
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=74.98 E-value=12 Score=28.45 Aligned_cols=53 Identities=25% Similarity=0.253 Sum_probs=36.1
Q ss_pred hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 021465 116 EADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLP 168 (312)
Q Consensus 116 Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~ 168 (312)
+|--++.++-|..-.+....+..|......|..+|..|++||..++.=+.++|
T Consensus 25 ~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll~q~p 77 (78)
T 1gu4_A 25 IAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLP 77 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 34446666677777777777888888888888888888888877775444433
No 123
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=74.97 E-value=16 Score=36.48 Aligned_cols=35 Identities=6% Similarity=0.020 Sum_probs=19.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQELTSKIQQA 153 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l 153 (312)
+-.+-.|-.+..+++.+++.|.+.++.++.++..+
T Consensus 32 ~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~ 66 (485)
T 3qne_A 32 VDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 66 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455555666666666666665555443
No 124
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=74.73 E-value=13 Score=29.87 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIan 225 (312)
+.+++++..+..++..+..+|..
T Consensus 105 ~~l~~~l~~l~~~i~~~~~~l~~ 127 (133)
T 1fxk_C 105 QKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444443
No 125
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=74.46 E-value=14 Score=29.90 Aligned_cols=38 Identities=8% Similarity=0.080 Sum_probs=24.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
|.++.++.+||.+.+.++..|..+-++|...++.+.+|
T Consensus 3 ~~s~~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkE 40 (106)
T 4e61_A 3 LGSLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIE 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777777777776666666666666655554
No 126
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=74.18 E-value=29 Score=27.05 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
..+++..++..+......+-.++..+++.+..
T Consensus 24 ~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~ 55 (101)
T 3u59_A 24 RAEQAEADKKQAEDRCKQLEEEQQGLQKKLKG 55 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 33333444444433344444444444444433
No 127
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=73.72 E-value=18 Score=35.63 Aligned_cols=28 Identities=18% Similarity=0.322 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKIQ 151 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aevq 151 (312)
.+-.+..++..+++.|.+.|+.++.++.
T Consensus 35 ~l~~~~r~~~~~~~~l~~~~n~~sk~i~ 62 (455)
T 2dq0_A 35 KLDTEWRTKLKEINRLRHERNKIAVEIG 62 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444444443
No 128
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=73.19 E-value=27 Score=26.22 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQ 137 (312)
Q Consensus 125 lk~EL~q~r~e~q 137 (312)
+|.-+.+++.|..
T Consensus 4 ikkKm~~lk~e~d 16 (81)
T 1ic2_A 4 IKKKMQMLKLDKE 16 (81)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 129
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=72.87 E-value=75 Score=31.18 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHHhhhhh------hhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHH---------H
Q 021465 47 LLEDKIAVQAAEIERLARD------NHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLD---------K 111 (312)
Q Consensus 47 ~lE~~l~~q~~Ei~~L~~d------NqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~e---------k 111 (312)
+||..|+++...|..|... -..|...+..|..-...=++.|..|..++.++..|. .=|++-.. +
T Consensus 46 ~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~a~~Rr~~Le~L~qFl~d~~ee~-~Wi~EKe~~~~s~d~gd~ 124 (450)
T 3r6n_A 46 GIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREI-MWINDCEEEELLYDWSDK 124 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHSCCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccccCcC
Confidence 7888888888888887642 123333344444433444444555555555544432 11121111 1
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
..-+.+-++.-+.++.||.--...++.+...-+.|+.
T Consensus 125 l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~ 161 (450)
T 3r6n_A 125 NTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVL 161 (450)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHH
Confidence 1223444455566666666655666666666666654
No 130
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=72.85 E-value=14 Score=28.80 Aligned_cols=50 Identities=22% Similarity=0.220 Sum_probs=28.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 021465 118 DCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNL 167 (312)
Q Consensus 118 elra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql 167 (312)
--++.++-|..-.+...++..|......|-.+|..|+.|+..++.=+.++
T Consensus 27 arrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 27 VRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 33445555555555666666666666666666666666666655433333
No 131
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=72.72 E-value=30 Score=26.50 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 176 SLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 176 ~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIana 226 (312)
..+.|++.+|.+-+.-+++...+-+=+..++++-+++...++.|+...+..
T Consensus 22 q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL 72 (78)
T 3iv1_A 22 RAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEEL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444443333333333333334555666666666666665554443
No 132
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=72.38 E-value=17 Score=25.82 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+..+.=|....++..++..|.....+|..++..|+.++..++.
T Consensus 15 k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~ 57 (61)
T 1t2k_D 15 RSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQ 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667777777777777777777777777777766653
No 133
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=72.37 E-value=44 Score=28.28 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcHHhHHHH
Q 021465 175 DSLRQEHRRLRATFEYEKGLNIDNVEQL 202 (312)
Q Consensus 175 e~LrqElq~~RaaiE~EKk~~~elleq~ 202 (312)
+.|-+-+=.+|..+|.||-..++.|.+-
T Consensus 115 e~LT~TiG~LrKELEdEklK~~E~MdSF 142 (167)
T 4gkw_A 115 ESLTETIGILRKELENEKLKAAENMDSF 142 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666677777777776666655543
No 134
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=72.23 E-value=14 Score=29.01 Aligned_cols=78 Identities=14% Similarity=0.290 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhchh-hHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 021465 77 REDLAAAQQEIPRIKAHIRNIHTES-DSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLA-RARQELTSKIQQAS 154 (312)
Q Consensus 77 ~qeL~aaq~Elq~L~~~~~~~~ae~-e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~-~~rqeL~aevq~l~ 154 (312)
+++...+..+|.+.-..+..+..|. ...|+++.... +-...=|.|...|++.+- +.|..+.+++..-+
T Consensus 11 E~df~~l~~~i~~kl~~i~~~~geerk~~i~~ie~~l----------~EA~ell~qMelE~r~~p~~~R~~~~~klr~Yk 80 (102)
T 1vcs_A 11 EQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQL----------EEARELLEQMDLEVREIPPQSRGMYSNRMRSYK 80 (102)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTTHHHHHHHHHHHH----------HHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHhCCHHhHHHHHHHHHHHH
Confidence 4555666666655555444433222 22222222221 222223344444554442 34666777777777
Q ss_pred HHHHHHHHhc
Q 021465 155 EALHKARLEV 164 (312)
Q Consensus 155 ~EL~r~kad~ 164 (312)
.+|.+.+.++
T Consensus 81 ~dL~~lk~el 90 (102)
T 1vcs_A 81 QEMGKLETDF 90 (102)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 7776666533
No 135
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=72.11 E-value=12 Score=34.46 Aligned_cols=24 Identities=8% Similarity=0.158 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 204 AMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 204 aMEknL~~marEvekLrAEIanae 227 (312)
..+.++.....+++.++..+.+..
T Consensus 133 ~~~~~l~~~~~~l~~a~~~l~~~~ 156 (369)
T 4dk0_A 133 VVQENIKQAEIEVNTAETNLGYTK 156 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCE
Confidence 344455555666677776665543
No 136
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=71.78 E-value=21 Score=29.01 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=26.5
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQE 145 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqe 145 (312)
+.|.|+++..+.|.| ++.|+.++.+++..+......-++
T Consensus 5 e~~~~~~~~~~~e~e---~~~l~~~~~el~~~l~~~~~~~~e 43 (125)
T 1joc_A 5 ERRALLERCLKGEGE---IEKLQTKVLELQRKLDNTTAAVQE 43 (125)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888875 466777777777666554444333
No 137
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=71.62 E-value=34 Score=26.78 Aligned_cols=57 Identities=16% Similarity=0.201 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
+......+++..+++.+......+-.++..|++.+.... .+++.....+..+...++
T Consensus 19 e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE----------~eld~~ee~L~ea~~kLe 75 (101)
T 3u1c_A 19 ENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTE----------DSRDQVLEELHKSEDSLL 75 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH
Confidence 444444555555555555555555555655555555444 455555555554444433
No 138
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=71.58 E-value=3.9 Score=32.37 Aligned_cols=39 Identities=18% Similarity=0.271 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQ-ELTSKIQQASEALHKARL 162 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rq-eL~aevq~l~~EL~r~ka 162 (312)
.+|+|.+.+-.++..+..+++ +.-.+++....||...+.
T Consensus 18 ~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~ 57 (92)
T 3vp9_A 18 AIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRN 57 (92)
T ss_dssp CTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 344444444455554444443 555555555555555553
No 139
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=71.58 E-value=89 Score=31.51 Aligned_cols=20 Identities=20% Similarity=0.303 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHhHHHHH
Q 021465 73 HITMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~ 92 (312)
|..|+|.|..++-||-.+..
T Consensus 351 ~~~lrQRlddArNEItsaeS 370 (602)
T 1cii_A 351 WDKLRQRLLDARNKITSAES 370 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444333333
No 140
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=71.25 E-value=90 Score=31.46 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
.+.|+-++..+++.+.+.+.-+..+.+...+.|..
T Consensus 361 ArNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a 395 (602)
T 1cii_A 361 ARNKITSAESAVNSARNNLSARTNEQKHANDALNA 395 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555555555555555544444
No 141
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=71.17 E-value=53 Score=28.71 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=6.1
Q ss_pred hhhhhhHHHHHHHH
Q 021465 67 HRLAASHITMREDL 80 (312)
Q Consensus 67 qrLa~th~~L~qeL 80 (312)
.+++..|..+-+.|
T Consensus 83 e~~a~~h~~~a~~l 96 (276)
T 2v0o_A 83 EKLANCHLDLVRKL 96 (276)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444444
No 142
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=71.10 E-value=59 Score=29.25 Aligned_cols=20 Identities=5% Similarity=-0.002 Sum_probs=9.2
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 021465 167 LPDLHAELDSLRQEHRRLRA 186 (312)
Q Consensus 167 l~alraELe~LrqElq~~Ra 186 (312)
+...|..-+...++++.++.
T Consensus 159 l~KaK~~Y~~~c~e~e~a~~ 178 (312)
T 3abh_A 159 VEAAKKAHHAACKEEKLAIS 178 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444455554444
No 143
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=70.98 E-value=34 Score=26.41 Aligned_cols=59 Identities=17% Similarity=0.313 Sum_probs=40.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEH 181 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqEl 181 (312)
+..|-|-+|+..+|-.+-.|.+.|..---++.+-+.+|.-.+. +|+.--+||..|+.++
T Consensus 19 ~~~E~L~qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~---qLe~kd~ei~rL~~~l 77 (81)
T 3qh9_A 19 RKAEELLQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQE---QVALKDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH---HHHhhHHHHHHHHHHH
Confidence 4445678888888888888888887776667777666666663 5555555665555544
No 144
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=70.50 E-value=11 Score=34.18 Aligned_cols=17 Identities=12% Similarity=0.245 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 211 GMAREMEKLHAEVVNAE 227 (312)
Q Consensus 211 ~marEvekLrAEIanae 227 (312)
....+++.+++.+..++
T Consensus 132 ~~~a~l~~a~a~l~~a~ 148 (341)
T 3fpp_A 132 TIDAQIKRNQASLDTAK 148 (341)
T ss_dssp HHHHHHHHTHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444455544433
No 145
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=70.34 E-value=30 Score=27.90 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHhhh
Q 021465 72 SHITMREDLAAAQQEIPRIKAHIRN 96 (312)
Q Consensus 72 th~~L~qeL~aaq~Elq~L~~~~~~ 96 (312)
+..++.++|+.+++++..|...+..
T Consensus 5 s~~al~~eL~~~~~ei~~L~~ei~e 29 (106)
T 4e61_A 5 SLVAIQAELTKSQETIGSLNEEIEQ 29 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777777666666664333
No 146
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=70.06 E-value=20 Score=27.44 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
-.+|..+.|.++|++.|....++|..=-+.+..=|.+.+
T Consensus 14 rrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~ 52 (78)
T 3iv1_A 14 WRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLD 52 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 457778888888888888888877765555555444444
No 147
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=69.97 E-value=9.3 Score=29.03 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=26.5
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhH
Q 021465 70 AASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEA 117 (312)
Q Consensus 70 a~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Ea 117 (312)
-.+...|.+.+...+.+|.+|.. +++.|.+|...++.
T Consensus 27 E~tIeeLn~~v~~Qq~~Id~L~~-----------ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 27 EQALTELSEALADARLTGARNAE-----------LIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHhhh
Confidence 45677788888899999999987 88888888877764
No 148
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=69.21 E-value=6.4 Score=24.95 Aligned_cols=8 Identities=0% Similarity=0.086 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 021465 152 QASEALHK 159 (312)
Q Consensus 152 ~l~~EL~r 159 (312)
.+++|++.
T Consensus 6 alkqeiaa 13 (33)
T 4dzn_A 6 ALKQEIAA 13 (33)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 149
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=68.21 E-value=9.1 Score=27.07 Aligned_cols=27 Identities=15% Similarity=0.251 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
+|+||.|+..+++++..|...-++|.+
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666554444444433
No 150
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=68.09 E-value=5.4 Score=29.67 Aligned_cols=39 Identities=10% Similarity=-0.001 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
....|+.|+.+++.|.....++|+ .++-..+++.+.++.
T Consensus 7 ~~~~l~~E~~~lk~E~~stSaQDe--FAKWaKL~Rk~DKl~ 45 (65)
T 3sja_C 7 KYLAKVKERHELKEFNNSISAQDN--YAKWTKNNRKLDSLD 45 (65)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTTT--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccchHHH--HHHHHHHHHHHHHHH
Confidence 334566666677766666655553 345555555555544
No 151
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=68.04 E-value=7.3 Score=30.89 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 144 QELTSKIQQASEALHKAR 161 (312)
Q Consensus 144 qeL~aevq~l~~EL~r~k 161 (312)
+.|..++..+.++|+++.
T Consensus 18 kkL~~Ki~el~~ei~ke~ 35 (98)
T 2ke4_A 18 KRLQQQLEERSRELQKEV 35 (98)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445555555555555544
No 152
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=67.99 E-value=66 Score=30.87 Aligned_cols=56 Identities=9% Similarity=0.176 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEM 228 (312)
Q Consensus 173 ELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanaek 228 (312)
|+..+..-.+.+++.++.-+.....+-++++.-..+.-.+.+++.+|.-+|-...|
T Consensus 199 e~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp~l~ql~k 254 (373)
T 3hhm_B 199 EIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRK 254 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHH
Confidence 44444444444555544444444444444555555555666777777777766554
No 153
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=67.95 E-value=1.3e+02 Score=32.12 Aligned_cols=28 Identities=14% Similarity=0.056 Sum_probs=11.9
Q ss_pred HhhcHHhHHHHHHHHHHHHHHHHHHHHH
Q 021465 192 KGLNIDNVEQLQAMEKNLVGMAREMEKL 219 (312)
Q Consensus 192 Kk~~~elleq~qaMEknL~~marEvekL 219 (312)
++.+...++..+.+..--+.-++++..+
T Consensus 763 ~~~~~~el~~~~~~~ele~~k~~~la~i 790 (861)
T 2zuo_A 763 KKVREMELIYARAQLELEVSKAQQLANV 790 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4444444444444444444444444333
No 154
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=67.84 E-value=32 Score=26.58 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=20.7
Q ss_pred HHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 188 FEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 188 iE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
..||+|...-. +++..+.+.|..-..|++.|..++.
T Consensus 43 lQyEkKLKsTK-~El~~Lq~qLe~kd~ei~rL~~~l~ 78 (81)
T 3qh9_A 43 NQYEWKLKATK-AEVAQLQEQVALKDAEIERLHSQLS 78 (81)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhH-HHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 44455544332 5556666666666667777766654
No 155
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=67.68 E-value=18 Score=26.53 Aligned_cols=40 Identities=25% Similarity=0.422 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEV 164 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~ 164 (312)
+|.-|.-..+.+|.|......|..|+..+.++|.+.++++
T Consensus 18 vK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen 57 (63)
T 2w6a_A 18 LKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAEN 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhh
Confidence 6777777788899999999998888888888888887654
No 156
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=67.66 E-value=48 Score=26.87 Aligned_cols=72 Identities=17% Similarity=0.239 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Q 021465 103 SHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHR 182 (312)
Q Consensus 103 ~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq 182 (312)
.+.|+|-.+...+..|+ +.+|..+.+. ..+....+..|.++|...+.....+-.-..+|+.-..+++
T Consensus 3 k~~rdL~~~~~~L~~E~---e~~k~K~~~~----------~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLE 69 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEV---EALKEKLEHQ----------YAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLE 69 (111)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH---HHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 36777777776554332 3444444443 3344445556666666666555455555567777777776
Q ss_pred HHHHH
Q 021465 183 RLRAT 187 (312)
Q Consensus 183 ~~Raa 187 (312)
+....
T Consensus 70 R~~R~ 74 (111)
T 2v66_B 70 RAKRA 74 (111)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 157
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=67.36 E-value=27 Score=24.36 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRATF 188 (312)
Q Consensus 172 aELe~LrqElq~~Raai 188 (312)
.+|...+.++..++..+
T Consensus 40 ~~l~~~~~~I~~~k~qi 56 (60)
T 3htk_A 40 EKLNTIRDEVIKKKNQN 56 (60)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444433
No 158
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=67.08 E-value=27 Score=25.17 Aligned_cols=43 Identities=7% Similarity=0.204 Sum_probs=28.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
-|..+.-|.+...+..+++.|.....+|..++..|+.|+..++
T Consensus 15 ~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk 57 (63)
T 1ci6_A 15 TRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666777777777777777777666666666666555
No 159
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=66.90 E-value=26 Score=25.15 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
..=++.+..+..++..|......|..++..|+.++...+
T Consensus 19 ~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk 57 (63)
T 2wt7_A 19 NRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLE 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555666666666666666666655555555544
No 160
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=66.89 E-value=52 Score=27.03 Aligned_cols=102 Identities=21% Similarity=0.163 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHH
Q 021465 126 KKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAM 205 (312)
Q Consensus 126 k~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaM 205 (312)
-..|.++.++.+.|......- ....+...+.+...+.+..+++++|+..-..+...+. +-+-|+.+.+++ +.+
T Consensus 8 ~s~l~~LEaeyq~L~~kE~qr---ynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~~~~-~~~yK~eY~~L~---KkY 80 (119)
T 2avr_X 8 VGELQALDAEYQNLANQEEAR---FNEERAQADAARQALAQNEQVYNELSQRAQRLQAEAN-TRFYKSQYQELA---SKY 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCTTHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHH---HHH
Confidence 344555555555544433322 3333333333333332223334444444333333211 222333334443 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhccCCC
Q 021465 206 EKNLVGMAREMEKLHAEVVNAE--MRGHAPN 234 (312)
Q Consensus 206 EknL~~marEvekLrAEIanae--kra~a~~ 234 (312)
..-+-.+..+|.+.+.-|-|.+ ...|+||
T Consensus 81 k~~~~~Ld~eI~~qe~iI~nFe~Iq~~~~~~ 111 (119)
T 2avr_X 81 EDALKKLEAEMEQQKAVISDFEKIQALRAGN 111 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4444444556666666666665 3344454
No 161
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=66.74 E-value=17 Score=26.66 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=16.2
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 166 ql~alraELe~LrqElq~~R 185 (312)
+++++|.|...+|.|++..|
T Consensus 52 evealrkeaaairdelqayr 71 (73)
T 2a3d_A 52 EVEALRKEAAAIRDELQAYR 71 (73)
T ss_dssp TTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 67888888888888888765
No 162
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=66.66 E-value=64 Score=27.96 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
++|++-..|...+...+........|.+++...++||.-.+.
T Consensus 11 ~ve~v~~~L~e~h~qy~~ks~~yd~l~e~y~r~sqEiq~Kr~ 52 (170)
T 3l4q_C 11 SVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRT 52 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 567888899999999999999999999999999999987773
No 163
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=66.58 E-value=83 Score=31.35 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 021465 198 NVEQLQAMEKNLVGMAREMEKLHAEVVNAEMRGH 231 (312)
Q Consensus 198 lleq~qaMEknL~~marEvekLrAEIanaekra~ 231 (312)
+-..++.+..-+..+.+.|++|+..|...+..-+
T Consensus 161 ~~~~i~~l~~~~~~~~~~i~~l~~~~~~~~~~c~ 194 (461)
T 3ghg_B 161 IPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR 194 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 3345577777778888889999988887765543
No 164
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=66.31 E-value=54 Score=27.84 Aligned_cols=80 Identities=11% Similarity=0.143 Sum_probs=37.7
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHH
Q 021465 123 ERLKKDLQ-QAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQ 201 (312)
Q Consensus 123 e~lk~EL~-q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq 201 (312)
+.+|.++. ++...+..+...-+.|--+.+.+..++.+.-. .---|...+.++.+++.+...|+....-|+....+++|
T Consensus 24 e~~Ke~l~~~l~~~i~q~d~elqQLefq~kr~~~e~~~q~~-~~~~p~~~~qi~~iq~q~~~ek~~r~e~k~~l~~ql~q 102 (150)
T 4dci_A 24 PTWKEEAEREISNGIANADQQLAQLEQEGQTVVDQVRRQSA-NPLDPRVQEQVANIQQQVAGKRSELEEQKRNLLQQQAQ 102 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444443 22333333444444444444444444443111 00125555666666666666666655555555555555
Q ss_pred HH
Q 021465 202 LQ 203 (312)
Q Consensus 202 ~q 203 (312)
++
T Consensus 103 v~ 104 (150)
T 4dci_A 103 VR 104 (150)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 165
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=66.31 E-value=36 Score=33.94 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=22.1
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 199 VEQ-LQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 199 leq-~qaMEknL~~marEvekLrAEIanae 227 (312)
+++ ++.+...+..+..++.++.+++...-
T Consensus 109 ~~~~~~~l~~~i~~le~~~~~~~~~~~~~l 138 (484)
T 3lss_A 109 LKQLSKDLSDQVAGLAKEAQQLEEERDKLM 138 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 77778888888888888888887543
No 166
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=65.55 E-value=20 Score=25.31 Aligned_cols=31 Identities=26% Similarity=0.317 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 131 QAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 131 q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+++..+..|.+....|..-++..+.+|.+++
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lk 43 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALR 43 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555444444444444444444
No 167
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=65.42 E-value=17 Score=25.18 Aligned_cols=10 Identities=20% Similarity=0.328 Sum_probs=5.3
Q ss_pred HHHHHHHHHH
Q 021465 153 ASEALHKARL 162 (312)
Q Consensus 153 l~~EL~r~ka 162 (312)
+++||++.+.
T Consensus 20 ~RkElqK~K~ 29 (45)
T 1use_A 20 VKKELQKVKE 29 (45)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3555555554
No 168
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=65.22 E-value=14 Score=33.53 Aligned_cols=12 Identities=8% Similarity=0.332 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHH
Q 021465 214 REMEKLHAEVVN 225 (312)
Q Consensus 214 rEvekLrAEIan 225 (312)
.+++.++++|..
T Consensus 128 a~l~~~~a~l~~ 139 (341)
T 3fpp_A 128 AQIGTIDAQIKR 139 (341)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444433
No 169
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=65.05 E-value=17 Score=29.30 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIanae 227 (312)
+.+++++..+.+.++++++.|....
T Consensus 98 ~~l~~~~~~l~~~l~~l~~~i~~~~ 122 (133)
T 1fxk_C 98 NELESTLQKMGENLRAITDIMMKLS 122 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666666666666665544
No 170
>2oeq_A Protein of unknown function, DUF964; helix bundle, structural genomics, PSI-2, protein structure initiative; 2.90A {Geobacillus stearothermophilus} SCOP: a.281.1.2
Probab=64.25 E-value=53 Score=26.14 Aligned_cols=99 Identities=15% Similarity=0.244 Sum_probs=58.0
Q ss_pred HHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHHH
Q 021465 107 VLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKN-LPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 107 ~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qq-l~alraELe~LrqElq~~R 185 (312)
+++|+...|...|+..+.++ .+.+++..+.. -..-+.|+.+.+.++.++...+.--+. .+....++..+..++..
T Consensus 7 ~I~d~A~eL~~~I~~seEy~-~~k~A~~~l~~-D~ea~~li~~F~~~q~~~q~~q~~G~~~~~e~~~~l~~l~~~l~~-- 82 (122)
T 2oeq_A 7 PLHALARQLEQAIRASEPFQ-QLKRAYEDVRR-DETAYRMFANVRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQ-- 82 (122)
T ss_dssp TTHHHHHHHHHHHHHSHHHH-HHHHHHHHHHT-CTTHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhC--
Confidence 57788888888888888877 66666655542 333456777788888888777643322 24444444444444432
Q ss_pred HHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHH
Q 021465 186 ATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKL 219 (312)
Q Consensus 186 aaiE~EKk~~~elleq~qaMEknL~~marEvekL 219 (312)
...+.....-+..|..+-.+|.++
T Consensus 83 ----------n~~v~~~~~Ae~~l~~ll~~I~~i 106 (122)
T 2oeq_A 83 ----------NEKLARLMALEQQMSITIAEVQQI 106 (122)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233444444555555555555444
No 171
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=64.19 E-value=11 Score=29.30 Aligned_cols=48 Identities=10% Similarity=0.179 Sum_probs=35.3
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHH
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDK 111 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek 111 (312)
+..-+.+|..|......++.+++.+++|+..|+.. |++-.++-.++++
T Consensus 33 L~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~el-----A~~~q~la~~i~~ 80 (83)
T 1wlq_A 33 LYEALKENEKLHKEIEQKDSEIARLRKENKDLAEV-----AEHVQYMAEVIER 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 34568899999999999999999999999988774 3333344444444
No 172
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=64.17 E-value=73 Score=27.75 Aligned_cols=6 Identities=17% Similarity=0.379 Sum_probs=2.3
Q ss_pred hhHHHH
Q 021465 47 LLEDKI 52 (312)
Q Consensus 47 ~lE~~l 52 (312)
+|..++
T Consensus 22 ~l~~~~ 27 (276)
T 2v0o_A 22 VLYHNM 27 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 173
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=63.99 E-value=56 Score=26.86 Aligned_cols=74 Identities=14% Similarity=0.278 Sum_probs=40.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELT 147 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~ 147 (312)
-++.....|-.+|...-+.|..|=.....+..-.|.|.+. +.+ |-.|+..+..+.+........|+
T Consensus 54 ~f~~~~~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~r----i~~----------L~~E~~~~~~el~~~v~e~e~ll 119 (132)
T 1ykh_B 54 EFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRK----IDM----------LQKKLVEVEDEKIEAIKKKEKLM 119 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHH----HHH----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHH----HHH----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566777788888888877777776444444332 222 33344444444444444444555
Q ss_pred HHHHHHHH
Q 021465 148 SKIQQASE 155 (312)
Q Consensus 148 aevq~l~~ 155 (312)
.+++.+-.
T Consensus 120 ~~v~~~l~ 127 (132)
T 1ykh_B 120 RHVDSMIE 127 (132)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55554433
No 174
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=63.92 E-value=1.4e+02 Score=30.75 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=23.4
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIHTES 101 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~ 101 (312)
.|-..|.+++.+|.+.+..++.+......+....
T Consensus 408 ~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~ 441 (863)
T 1sjj_A 408 ALLKKHEAFESDLAAHQDRVEQIAAIAQELNELD 441 (863)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445677777777777777777777666665544
No 175
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=63.87 E-value=16 Score=26.72 Aligned_cols=56 Identities=23% Similarity=0.356 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhh--------hHHHHHHHHHHHHHHHH
Q 021465 75 TMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKA--------GERLKKDLQQAHIEAQS 138 (312)
Q Consensus 75 ~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra--------~e~lk~EL~q~r~e~q~ 138 (312)
.++|.|++.+--||.|-- .|.++..+...++-.|++|++ +|+|++|....|-|+|.
T Consensus 6 efkqrlaaiktrlqalgg--------seaelaafekeiaafeselqaykgkgnpevealrkeaaairdelqa 69 (73)
T 2a3d_A 6 EFKQRLAAIKTRLQALGG--------SEAELAAFEKEIAAFESELQAYKGKGNPEVEALRKEAAAIRDELQA 69 (73)
T ss_dssp HHHHHHHHHHHHHHHCSS--------GGGTHHHHHHHHHHHHHHHHHSSSCCSSTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--------cHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH
Confidence 345555555555554422 233445555556666666653 56777776666666553
No 176
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=63.86 E-value=41 Score=26.81 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRAT 187 (312)
Q Consensus 172 aELe~LrqElq~~Raa 187 (312)
.+++.|+.|++++|..
T Consensus 75 ~~~e~Lq~E~erLr~~ 90 (100)
T 1go4_E 75 EDHSQLQAECERLRGL 90 (100)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444443
No 177
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=63.14 E-value=50 Score=25.51 Aligned_cols=14 Identities=14% Similarity=0.164 Sum_probs=5.7
Q ss_pred HHHHHHHHhHHHHH
Q 021465 79 DLAAAQQEIPRIKA 92 (312)
Q Consensus 79 eL~aaq~Elq~L~~ 92 (312)
++.....+|..|+.
T Consensus 11 ~~~~~~~~l~~L~~ 24 (112)
T 1l8d_A 11 KKTTIEEERNEITQ 24 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444433
No 178
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=63.10 E-value=62 Score=28.76 Aligned_cols=6 Identities=50% Similarity=0.678 Sum_probs=2.4
Q ss_pred HHHHHH
Q 021465 203 QAMEKN 208 (312)
Q Consensus 203 qaMEkn 208 (312)
|.|+..
T Consensus 219 Q~lee~ 224 (290)
T 3i2w_A 219 QTFEKT 224 (290)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 179
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=62.93 E-value=39 Score=26.16 Aligned_cols=19 Identities=21% Similarity=0.419 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRA 186 (312)
Q Consensus 168 ~alraELe~LrqElq~~Ra 186 (312)
+.++.|+..|++|.+.+|.
T Consensus 56 e~l~eEi~~lk~en~eL~e 74 (83)
T 1uii_A 56 EQKDNEIARLKKENKELAE 74 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444445555554444
No 180
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=62.75 E-value=97 Score=29.47 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 130 QQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 130 ~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
++..+.++.|.-....|.++...+...|+
T Consensus 362 ~e~~~~~~~~~~~~~~~~~q~~~~~~~~~ 390 (406)
T 4dyl_A 362 QEALQGLQVALCSQAKLQAQQELLQTKLE 390 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444443
No 181
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=62.73 E-value=34 Score=24.18 Aligned_cols=17 Identities=35% Similarity=0.319 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 146 LTSKIQQASEALHKARL 162 (312)
Q Consensus 146 L~aevq~l~~EL~r~ka 162 (312)
|..+|..|..++..++.
T Consensus 16 L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 16 ANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 182
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=62.50 E-value=66 Score=26.65 Aligned_cols=26 Identities=12% Similarity=0.431 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhhh
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNIH 98 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~~ 98 (312)
-+.|...++-++.++.+|...+.++.
T Consensus 8 ~~~l~~KvAElekkv~~lek~lk~~~ 33 (125)
T 2pms_C 8 EVAPQAKIAELENQVHRLEQELKEID 33 (125)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44566777777777777766554443
No 183
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=62.44 E-value=49 Score=26.54 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=53.5
Q ss_pred hhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 96 NIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 96 ~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
.-++++|..-+-|.++.--+.-+-=+.+.|+.-..+++.-+.+|.+.+-+|..++....-||..++.
T Consensus 18 k~q~ereeKkkiLaER~kpL~id~l~~~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI~eL~~ 84 (106)
T 1j1d_B 18 KRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEINVLRN 84 (106)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHHHHHHH
Confidence 3455667778888998877755544567899999999999999999999999999988888877765
No 184
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=62.41 E-value=43 Score=24.47 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Q 021465 146 LTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRR 183 (312)
Q Consensus 146 L~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~ 183 (312)
|...+..-..+|...+. +|..++..|+.|+-||+.
T Consensus 40 l~~~~~~~~~~l~~~k~---Ei~elrr~iq~L~~el~s 74 (77)
T 3trt_A 40 LSEAANRNNDALRQAKQ---ESTEYRRQVQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHH---HHHHHHHHHHHHHHHHHh
Confidence 33334444444444443 233333444444444433
No 185
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=62.07 E-value=25 Score=34.16 Aligned_cols=27 Identities=15% Similarity=0.398 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 199 VEQLQAMEKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 199 leq~qaMEknL~~marEvekLrAEIan 225 (312)
+++++.+...+..+..++.++.+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (425)
T 2dq3_A 74 QNRVKELKEEIDRLEEELRKVEEELKN 100 (425)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455555555555543
No 186
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=61.84 E-value=55 Score=27.62 Aligned_cols=76 Identities=12% Similarity=0.269 Sum_probs=46.0
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
++.....|-.+|...-+.|..|=.....+..-.|.|.+.+ ..|-.|+..+..+.+..+.....|+.
T Consensus 55 f~~~~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri--------------~~Le~E~~~~~~el~~~v~eae~ll~ 120 (151)
T 1yke_B 55 FSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKI--------------DMLQKKLVEVEDEKIEAIKKKEKLLR 120 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555667777777788888777777764444443322 33444555555566666666666666
Q ss_pred HHHHHHHHHH
Q 021465 149 KIQQASEALH 158 (312)
Q Consensus 149 evq~l~~EL~ 158 (312)
+|+.+-.++.
T Consensus 121 ~v~~~l~~ia 130 (151)
T 1yke_B 121 HVDSLIEDFV 130 (151)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHH
Confidence 7776666653
No 187
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=61.81 E-value=10 Score=26.22 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=7.2
Q ss_pred hhHHHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHR 182 (312)
Q Consensus 168 ~alraELe~LrqElq 182 (312)
.++|.||..+++|+.
T Consensus 18 ~E~RkElqK~K~EII 32 (45)
T 1use_A 18 EEVKKELQKVKEEII 32 (45)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455555555443
No 188
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=61.41 E-value=74 Score=26.86 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=15.3
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhh
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIR 95 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~ 95 (312)
.|-..|..++.+|.+-+..++.+.....
T Consensus 50 ~ll~~H~~l~~ei~~~~~~~~~~~~~G~ 77 (218)
T 3fb2_A 50 ALLERHQEHRTEIDARAGTFQAFEQFGQ 77 (218)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3445566666666655555555544333
No 189
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=61.35 E-value=18 Score=36.64 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~R 185 (312)
|...|.|...+..+....-.+-...+..|-.++..++.+...|+..+.+++...+.|....
T Consensus 340 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~e~~~~~~~e~~~l~~~~~~~e~~~~~l~~~~ 400 (575)
T 2i1j_A 340 YQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETK 400 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444433333333334444555555555555555555555555554444433
No 190
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=61.04 E-value=53 Score=25.10 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=12.2
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 021465 60 ERLARDNHRLAASHITMREDLAAAQQE 86 (312)
Q Consensus 60 ~~L~~dNqrLa~th~~L~qeL~aaq~E 86 (312)
+.+-..|+.|-.....|+++|...+++
T Consensus 16 q~~E~rN~~Le~~v~~le~~Le~s~~~ 42 (79)
T 3cvf_A 16 QDLETRNAELEHQLRAMERSLEEARAE 42 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444433
No 191
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=60.66 E-value=54 Score=25.05 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcHHhHHHH
Q 021465 175 DSLRQEHRRLRATFEYEKGLNIDNVEQL 202 (312)
Q Consensus 175 e~LrqElq~~RaaiE~EKk~~~elleq~ 202 (312)
+..++|+...-..+..||..-+.++...
T Consensus 34 e~~rkele~~~~~l~~ek~~L~~ql~ea 61 (89)
T 3bas_A 34 ERIKKELEEQNVTLLEQKNDLFGSMKQL 61 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3455555555555555555555443333
No 192
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=60.65 E-value=2.3 Score=33.84 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=39.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
.+....|+.|+.+++.|.....++|+ .++-..+++.+.++. .||+.++.++...|+.|+
T Consensus 29 ~~~~~~lk~E~~~lk~E~~stSaQDE--FAKWAKL~Rk~DKl~----------~ele~l~~~L~s~ks~fd 87 (94)
T 3vlc_E 29 SKKYLAKVKERHELKEFNNSISAQDN--YAKWTKNNRKLDSLD----------KEINNLKDEIQSENKAFQ 87 (94)
T ss_dssp THHHHHHHHHHHHHHHHHTTSCTTTC--HHHHHHHHHHHHHHH----------HHTTTHHHHTTTTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHH--HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHH
Confidence 34456678888888888887777664 566666777666655 555666666666666553
No 193
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=60.49 E-value=11 Score=29.27 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=30.3
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhh
Q 021465 60 ERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIR 95 (312)
Q Consensus 60 ~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~ 95 (312)
..-+.+|..|......|+.+++.++.|+..|+..+.
T Consensus 42 ~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae 77 (83)
T 1uii_A 42 YEALKENEKLHKEIEQKDNEIARLKKENKELAEVAE 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999999999999998877443
No 194
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=60.33 E-value=23 Score=29.81 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021465 206 EKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 206 EknL~~marEvekLrAEIanae 227 (312)
+.+++..++.+.-+..++.+++
T Consensus 72 drKyeE~~RKl~~~E~dLerae 93 (147)
T 2b9c_A 72 DRKYEEVARKLVIIESDLERAE 93 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443
No 195
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=59.82 E-value=74 Score=31.70 Aligned_cols=37 Identities=3% Similarity=0.128 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
-.++.+|++++..++.|...-.+.-.-|+.++.-+..
T Consensus 91 ~~V~~dl~~Le~~l~~isn~Ts~a~~~v~~ik~s~~~ 127 (461)
T 3ghg_B 91 RPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQK 127 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 3455555555555555554444444444444444433
No 196
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=59.82 E-value=25 Score=25.06 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=30.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+..+.=+..+.++..++..|.....+|..++..|+.++..++
T Consensus 15 k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk 56 (62)
T 1jnm_A 15 KSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLK 56 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555667777777888888888888888887777776665
No 197
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=59.38 E-value=94 Score=27.40 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=18.3
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHhhhhhc
Q 021465 70 AASHITMREDLAAAQQEIPRIKAHIRNIHT 99 (312)
Q Consensus 70 a~th~~L~qeL~aaq~Elq~L~~~~~~~~a 99 (312)
-..|..|+.+|.+.+..+..+......+..
T Consensus 42 l~kh~~le~~i~~~~~~v~~l~~~a~~l~~ 71 (322)
T 1u4q_A 42 LKKHQLLEADISAHEDRLKDLNSQADSLMT 71 (322)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 344556666777766666666665555543
No 198
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=59.32 E-value=94 Score=27.41 Aligned_cols=20 Identities=10% Similarity=0.119 Sum_probs=8.7
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 168 ~alraELe~LrqElq~~Raa 187 (312)
...|..-+...+|++.++..
T Consensus 133 ~KaKk~Y~~~~~e~e~a~~~ 152 (301)
T 2efk_A 133 ENSKRKFERDCREAEKAAQT 152 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444443
No 199
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=59.26 E-value=83 Score=26.73 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=8.5
Q ss_pred cchhHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEH 181 (312)
Q Consensus 166 ql~alraELe~LrqEl 181 (312)
.++.+|..|.-+-.|+
T Consensus 112 ~~e~lr~~l~Py~~el 127 (185)
T 3r2p_A 112 EMELYRQKVEPLRAEL 127 (185)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4455555555555554
No 200
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=59.20 E-value=70 Score=25.89 Aligned_cols=23 Identities=30% Similarity=0.378 Sum_probs=10.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHH
Q 021465 62 LARDNHRLAASHITMREDLAAAQ 84 (312)
Q Consensus 62 L~~dNqrLa~th~~L~qeL~aaq 84 (312)
|-..|.||...+..++..+...+
T Consensus 8 L~~~~~~L~~E~e~~k~K~~~~~ 30 (111)
T 2v66_B 8 LQADNQRLKYEVEALKEKLEHQY 30 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555554444444444433
No 201
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=58.88 E-value=75 Score=27.09 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=60.2
Q ss_pred HHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Q 021465 109 LDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATF 188 (312)
Q Consensus 109 ~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raai 188 (312)
.+|++|+...||+..+ .+|+.+---++.+...++.-..++..+..+|+..+.-++-+.++-. .+.. . ...
T Consensus 16 eeks~~L~~Lirs~~P--eDL~~AN~LiK~m~~~d~~r~e~~~k~~seLe~V~~nv~LL~EML~---~~~p----g-~~~ 85 (158)
T 1naf_A 16 EEKSKMLARLLKSSHP--EDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVM---SHSQ----G-GAA 85 (158)
T ss_dssp CHHHHHHHHHHSSCST--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTT----C----
T ss_pred HHHHHHHHHHHhcCCh--hhHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCC----C-cCC
Confidence 3678888877776665 4677888888889999988889999999999988864333333222 1110 0 000
Q ss_pred HH-HHhhcHHhHHHHHHHHHHHHHHHHH
Q 021465 189 EY-EKGLNIDNVEQLQAMEKNLVGMARE 215 (312)
Q Consensus 189 E~-EKk~~~elleq~qaMEknL~~marE 215 (312)
.. +.....+++++.+.|...+..+..+
T Consensus 86 ~~~d~Ell~eL~~~Ck~~qp~i~~Li~e 113 (158)
T 1naf_A 86 AGSSEDLMKELYQRCERMRPTLFRLASD 113 (158)
T ss_dssp --CCTTHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2234445666666666666666654
No 202
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=58.48 E-value=42 Score=25.16 Aligned_cols=8 Identities=13% Similarity=0.085 Sum_probs=2.9
Q ss_pred HHHHHhhc
Q 021465 188 FEYEKGLN 195 (312)
Q Consensus 188 iE~EKk~~ 195 (312)
+|.|..+|
T Consensus 45 Le~EIatY 52 (74)
T 2xv5_A 45 LDMEIHAY 52 (74)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 203
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=58.34 E-value=20 Score=26.74 Aligned_cols=23 Identities=13% Similarity=0.456 Sum_probs=15.1
Q ss_pred hhhhchhhHHHHHHHHHhhhhhH
Q 021465 95 RNIHTESDSHIRVLLDKIAKMEA 117 (312)
Q Consensus 95 ~~~~ae~e~qiR~L~ek~~k~Ea 117 (312)
..++.=++.+|++|.+++..+|.
T Consensus 21 RafReRK~~~i~~LE~~v~~le~ 43 (70)
T 1gd2_E 21 RAFRKRKEDHLKALETQVVTLKE 43 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566778888777766664
No 204
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=58.31 E-value=1.5e+02 Score=29.56 Aligned_cols=79 Identities=14% Similarity=0.180 Sum_probs=43.9
Q ss_pred hhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 021465 96 NIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELD 175 (312)
Q Consensus 96 ~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe 175 (312)
..-......++.+++...+-.+....++. .+...-.+|-.++.-+++.+..- ++.|-.||.-|+
T Consensus 79 ~s~~~s~~y~~~~~~~lk~~~~q~~dndn-------------~~~e~S~eLe~ri~yIK~kVd~q---i~~IrvLq~~l~ 142 (491)
T 1m1j_A 79 NKYKTSNRVIVETINILKPGLEGAQQLDE-------------NYGHVSTELRRRIVTLKQRVATQ---VNRIKALQNSIQ 142 (491)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred hhcchHHHHHHHHHHHHHHHHhhhccchh-------------HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 33444455777777665554444433333 23333334444444444444321 246677778888
Q ss_pred HHHHHHHHHHHHHHH
Q 021465 176 SLRQEHRRLRATFEY 190 (312)
Q Consensus 176 ~LrqElq~~RaaiE~ 190 (312)
.++-+++++..+|..
T Consensus 143 ~q~skIQRLE~dI~~ 157 (491)
T 1m1j_A 143 EQVVEMKRLEVDIDI 157 (491)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888887665
No 205
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=58.02 E-value=63 Score=25.86 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 127 KDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 127 ~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+.+.++..|..+|....+...++|..|..+|.+++.
T Consensus 44 ~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ 79 (104)
T 3s9g_A 44 KSLSRMEDENNRLRLESKRLDARVRELELELDRLRA 79 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Confidence 344445555555555555555566666655555554
No 206
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=57.61 E-value=32 Score=27.27 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=33.8
Q ss_pred HHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHH
Q 021465 88 PRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLA 140 (312)
Q Consensus 88 q~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~ 140 (312)
|.|..+...+...-|.=.++|.+.+..|+.++..+|.+-..+..+|.++.-|.
T Consensus 32 qELs~tfarLc~~Vd~t~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~ 84 (96)
T 1t3j_A 32 QEMATTFARLCQQVDMTQKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLE 84 (96)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44555566777777777777777777777777766666666666665555433
No 207
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=57.36 E-value=1.1e+02 Score=27.68 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhh
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNI 97 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~ 97 (312)
|.+|+.||.+-+.-++.+......+
T Consensus 50 h~~le~El~a~e~~v~~v~~~g~~L 74 (283)
T 3pe0_A 50 YSALMRELELKEKKIKELQNAGDRL 74 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6666666666655555555533333
No 208
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=57.35 E-value=71 Score=25.39 Aligned_cols=20 Identities=35% Similarity=0.549 Sum_probs=12.8
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 166 ql~alraELe~LrqElq~~R 185 (312)
++..++.||..|.++|+.++
T Consensus 68 ~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 68 RIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35556666666666666665
No 209
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=57.33 E-value=61 Score=32.37 Aligned_cols=32 Identities=9% Similarity=0.008 Sum_probs=22.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 196 IDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 196 ~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
.+++++++.+...+..+..++.++.++|...-
T Consensus 119 ~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l 150 (501)
T 1wle_A 119 QSLRARGREIRKQLTLLYPKEAQLEEQFYLRA 150 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777777777777777777776533
No 210
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=56.85 E-value=7.9 Score=31.97 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=3.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 146 LTSKIQQASEALHKAR 161 (312)
Q Consensus 146 L~aevq~l~~EL~r~k 161 (312)
|.++++.|+++|++.+
T Consensus 4 l~~~~~~l~~~~~~~~ 19 (182)
T 3kqg_A 4 LNAQIPELKSDLEKAS 19 (182)
T ss_dssp ---------CHHHHHH
T ss_pred hhhhHHHHHHHHHHHH
Confidence 3444555555554443
No 211
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=56.75 E-value=92 Score=26.48 Aligned_cols=97 Identities=9% Similarity=-0.001 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKAR----------------LEVKNLPDLHAELDSLRQEHRRLRATFEYE 191 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k----------------ad~qql~alraELe~LrqElq~~RaaiE~E 191 (312)
.|.+.-.++..+...|...+..++.+.++..... .++..+..++...+.+..|+...+..|..=
T Consensus 85 ~l~~~~~~L~~~a~~R~~~L~~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l 164 (210)
T 3pdy_A 85 RLDLQYAKLLNSSKARLRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKEL 164 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4445556777777777766666666655543321 122334444444455555554444444332
Q ss_pred HhhcHHhHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q 021465 192 KGLNIDNVEQL----QAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 192 Kk~~~elleq~----qaMEknL~~marEvekLrAEIa 224 (312)
...-..+++.. ..++..+..+....+.|..=+.
T Consensus 165 ~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~~L~~L~~ 201 (210)
T 3pdy_A 165 QNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCC 201 (210)
T ss_dssp HHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233222 4455555555555555544433
No 212
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=56.67 E-value=26 Score=25.37 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=23.8
Q ss_pred hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 116 EADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEAL 157 (312)
Q Consensus 116 Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL 157 (312)
||--+..+.=++.+.++..++..|......|..++..|+++|
T Consensus 19 eAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 19 EAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555666666666666666666666666555554
No 213
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=56.66 E-value=71 Score=31.84 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQAS 154 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~ 154 (312)
-.+-.|-.+-.+++.+++.|.+.|+.++.++..++
T Consensus 37 d~~~~ld~~~r~~~~~~~~l~~~rN~~sk~i~~~~ 71 (484)
T 3lss_A 37 DAIIEADKKWRRTQFLTEASKKLINICSKAVGAKK 71 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344444555556666666666666666665443
No 214
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=56.46 E-value=91 Score=26.33 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021465 134 IEAQSLARARQELTSKIQQASEALHKA--RLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGL 194 (312)
Q Consensus 134 ~e~q~L~~~rqeL~aevq~l~~EL~r~--kad~qql~alraELe~LrqElq~~RaaiE~EKk~ 194 (312)
.+.++|++-=.+|..-|..|++|+..- +-..+++..+..+|+.++++|..+...|..||-.
T Consensus 21 ~~sd~LvtkVDDLQD~VE~LRkDV~~RgvrP~~~ql~~v~kdi~~a~~eL~~m~~~i~~ekP~ 83 (141)
T 3okq_A 21 DLSDTLLSKVDDLQDVIEIMRKDVAERRSQPAKKKLETVSKDLENAQADVLKLQEFIDTEKPH 83 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 444555555555555556666665332 2233577888888888888888888887776543
No 215
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=56.30 E-value=70 Score=25.59 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=24.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 66 NHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 66 NqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
.+-|.-....|+..++.+++|-.+|+..
T Consensus 32 KqELIqEYl~LE~~~s~le~e~~rlr~~ 59 (104)
T 3s9g_A 32 KQELIKEYLELEKSLSRMEDENNRLRLE 59 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999999999774
No 216
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=56.26 E-value=1.1e+02 Score=27.26 Aligned_cols=16 Identities=19% Similarity=0.295 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQS 138 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~ 138 (312)
+.+|+-....+.++.+
T Consensus 90 eN~RkR~~rE~e~~~~ 105 (213)
T 4ani_A 90 ENFRRRTRQEMEAAEK 105 (213)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444444
No 217
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=55.90 E-value=17 Score=28.95 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 153 ASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 153 l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
|+.++.+.+.+...++.|++.++-.+.....-|++
T Consensus 43 LKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaa 77 (96)
T 3fx0_A 43 LKEEAEQHKIVMETVPVLKAQADIYKADFQAERQA 77 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444434444444444444444444433
No 218
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=55.18 E-value=1.3e+02 Score=27.63 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHhHHHHH
Q 021465 75 TMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 75 ~L~qeL~aaq~Elq~L~~ 92 (312)
.|+........++..+..
T Consensus 85 tl~~aw~~l~~e~e~~a~ 102 (350)
T 3aco_A 85 TVEKAWMAFMSEAERVSE 102 (350)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 444444455555554443
No 219
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=55.01 E-value=67 Score=28.75 Aligned_cols=20 Identities=20% Similarity=0.444 Sum_probs=10.0
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 021465 167 LPDLHAELDSLRQEHRRLRA 186 (312)
Q Consensus 167 l~alraELe~LrqElq~~Ra 186 (312)
|+.+..||..|++|.+.+|.
T Consensus 124 ie~l~eEi~~LkeEn~eLke 143 (209)
T 2wvr_A 124 IEQKDNEIARLKKENKELAE 143 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555554
No 220
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=54.90 E-value=97 Score=26.18 Aligned_cols=8 Identities=50% Similarity=0.625 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 021465 170 LHAELDSL 177 (312)
Q Consensus 170 lraELe~L 177 (312)
||+|+..+
T Consensus 65 Lrae~~~~ 72 (167)
T 4gkw_A 65 LRAELGTA 72 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 221
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=54.64 E-value=64 Score=24.05 Aligned_cols=89 Identities=11% Similarity=0.075 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHH-------HHHH
Q 021465 136 AQSLARARQELTSKIQQASEALHKAR---LEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQ-------LQAM 205 (312)
Q Consensus 136 ~q~L~~~rqeL~aevq~l~~EL~r~k---ad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq-------~qaM 205 (312)
+++|...-++|+.=+......|.... .|...+..+......+..|+...+..|+.-.+.-..+++. ...+
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i 83 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEV 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 34444444444444444333333221 1222223333333444455555544444433333333322 1234
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021465 206 EKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 206 EknL~~marEvekLrAEIa 224 (312)
...+..+....+.|...+.
T Consensus 84 ~~~l~~l~~rw~~L~~~~~ 102 (119)
T 3uun_A 84 QEQMNLLNSRWECLRVASM 102 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555555544443
No 222
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=54.59 E-value=1.2e+02 Score=26.97 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 142 ARQELTSKIQQASEAL 157 (312)
Q Consensus 142 ~rqeL~aevq~l~~EL 157 (312)
+.+.|++++|...+++
T Consensus 194 lq~~Ll~~~~~~~~~~ 209 (213)
T 1ik9_A 194 LHNKLLNAAQEREKDI 209 (213)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh
Confidence 3334444444444443
No 223
>3frt_A Charged multivesicular BODY protein 3; ESCRT, ESCRT-111, CHMP, IST1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein; 4.00A {Homo sapiens}
Probab=54.23 E-value=1.2e+02 Score=27.03 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Q 021465 153 ASEALHKARLEVKNLPDLHAELDSLRQEHRRLRA 186 (312)
Q Consensus 153 l~~EL~r~kad~qql~alraELe~LrqElq~~Ra 186 (312)
+-++|-+.+.....+-.+++.|+++.-.++...+
T Consensus 59 lAkelVR~Rk~~~rl~~~kaqL~sV~~rlqt~~s 92 (218)
T 3frt_A 59 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLA 92 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444443333444444555554444444443
No 224
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=53.79 E-value=25 Score=33.96 Aligned_cols=55 Identities=13% Similarity=0.265 Sum_probs=23.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 166 ql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
+|.+++.+|+.|+++...+...++.-+ .+++.++..|......-.+|.-+|....
T Consensus 4 ~~~~~~~~~~~l~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~rr~l~n~~~elk 58 (403)
T 4etp_A 4 KIAALKEKIAALKEKIAALKEKIKDTE-------LGMKELNEILIKEETVRRTLHNELQELR 58 (403)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344455555555555544444433222 2223333334444444444555555444
No 225
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=53.54 E-value=96 Score=25.76 Aligned_cols=32 Identities=16% Similarity=0.351 Sum_probs=21.5
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhc
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIHT 99 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~a 99 (312)
.|-..|..|+.++.+.+..+..+......+-.
T Consensus 40 ~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~ 71 (216)
T 1u5p_A 40 NLLKKHQLLEADISAHEDRLKDLNSQADSLMT 71 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445777778887777777777776655543
No 226
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=53.15 E-value=1.2e+02 Score=26.78 Aligned_cols=31 Identities=6% Similarity=0.216 Sum_probs=17.8
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhh
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIH 98 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ 98 (312)
.|-..|..++.+|.+-+..|..|......+-
T Consensus 41 ~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~ 71 (326)
T 3kbt_A 41 VMLKRHLRQQRAVEDYGRNIKQLASRAQGLL 71 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444566666666666666666655444443
No 227
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=53.12 E-value=14 Score=34.71 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=25.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHh
Q 021465 164 VKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDN 198 (312)
Q Consensus 164 ~qql~alraELe~LrqElq~~RaaiE~EKk~~~el 198 (312)
.++++.+.++++.|+.|+++++..++..++.+.+.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~n~~r 218 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKANAER 218 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Confidence 35777888888888888888877776666654444
No 228
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=52.88 E-value=1.1e+02 Score=26.38 Aligned_cols=105 Identities=13% Similarity=0.204 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHhhhhhchh---hHHHHHHHHHhh-------hhhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021465 74 ITMREDLAAAQQEIPRIKAHIRNIHTES---DSHIRVLLDKIA-------KMEADCKAGERLKKDLQQAHIEAQSLARAR 143 (312)
Q Consensus 74 ~~L~qeL~aaq~Elq~L~~~~~~~~ae~---e~qiR~L~ek~~-------k~Eaelra~e~lk~EL~q~r~e~q~L~~~r 143 (312)
..|-.+...+.+||+.-+.++.++...- +-|++ +-+|.. ..|+--.+.+.+..-.+.++..+..|...+
T Consensus 34 d~l~e~y~r~sqEiq~Kr~AieAF~E~ik~FeeQ~~-~qer~~~~~~~~f~~e~~~~E~~~l~~N~e~LksRL~~l~~sk 112 (170)
T 3l4q_C 34 DQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQ-TQEKSSKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESR 112 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSSSTTGGGSSSSSCCCSSSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666677777766665543322 23332 222221 234444455556666667777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Q 021465 144 QELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHR 182 (312)
Q Consensus 144 qeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq 182 (312)
+.|...+.....+.--..- ++.+++-+|-.|++.-.
T Consensus 113 ~~L~e~L~~q~~~~relER---emnsLKPeL~qL~K~rD 148 (170)
T 3l4q_C 113 TKLEQELRAQASDNREIDK---RMNSLKPDLMQLRKIRD 148 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHH
Confidence 7777766666555433331 44555555555554433
No 229
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=52.81 E-value=1.3e+02 Score=27.22 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=40.7
Q ss_pred hHHHHHHHHHhhhhhHhh--------hhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 021465 102 DSHIRVLLDKIAKMEADC--------KAGERLKKDLQQAH---IEAQSLARARQELTSKIQQASEALHKARLEVKNLPDL 170 (312)
Q Consensus 102 e~qiR~L~ek~~k~Eael--------ra~e~lk~EL~q~r---~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~al 170 (312)
+.-|.++.||..-|=.++ ...+..|..|..+| ..+|.+-..|+.|..+++.++.. ..+.
T Consensus 61 dddl~DIsdklgvLl~e~ge~e~~~a~~~d~yR~~LK~IR~~E~svqp~R~~R~~l~~~I~kLk~k----~P~s------ 130 (234)
T 3plt_A 61 DDDVSDVTDKLGVLIYELGELQDQFIDKYDQYRVTLKSIRNIEASVQPSRDRKEKITDEIAHLKYK----DPQS------ 130 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CTTC------
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc----CCCC------
Confidence 446666666666553333 33344455555554 55566666666677777665432 2222
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 171 HAELDSLRQEHRRLRAT 187 (312)
Q Consensus 171 raELe~LrqElq~~Raa 187 (312)
..|..|++|+.++.+.
T Consensus 131 -~kl~~LeqELvraEae 146 (234)
T 3plt_A 131 -TKIPVLEQELVRAEAE 146 (234)
T ss_dssp -THHHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHHH
Confidence 3455666666666555
No 230
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=52.57 E-value=1.2e+02 Score=26.72 Aligned_cols=10 Identities=10% Similarity=0.109 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 021465 73 HITMREDLAA 82 (312)
Q Consensus 73 h~~L~qeL~a 82 (312)
|..++.+|.+
T Consensus 152 ~~~f~~el~~ 161 (326)
T 3kbt_A 152 FRDFARETGA 161 (326)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344444443
No 231
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=51.91 E-value=26 Score=25.24 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=21.9
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHh
Q 021465 58 EIERLARDNHRLAASHITMREDLAAAQQEIPRIKAHI 94 (312)
Q Consensus 58 Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~ 94 (312)
++..|....+-|......|+.+++.++.|++.|...+
T Consensus 24 ~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 24 EQEALTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555666666666666666666665543
No 232
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=51.79 E-value=1.8e+02 Score=28.42 Aligned_cols=100 Identities=12% Similarity=0.146 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh----HHHHHHHHHHHHHHHHHHHHHHHhhcHHh
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPD----LHAELDSLRQEHRRLRATFEYEKGLNIDN 198 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~a----lraELe~LrqElq~~RaaiE~EKk~~~el 198 (312)
-.++.+|++++-.++.+...-.+.-.-|+.++.-+.+.+. +.+. .-..-..|-.|+.++...| ....
T Consensus 34 ~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~---~~~~n~~~~~q~Skkml~~~~~~~~~~----~~~~-- 104 (411)
T 3ghg_C 34 TKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDES---SKPNMIDAATLKSRKMLEEIMKYEASI----LTHD-- 104 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTC---CCTTCHHHHHHHHHHHHHHHHHHHHHH----HHHH--
T ss_pred cchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccC---CCCcchhhHHHHHHHHHHHHHHHHHHH----HhhH--
Confidence 4567777777777777766666555556666555544442 3322 1111222444444443322 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 021465 199 VEQLQAMEKNLVGMAREMEKLHAEVVNAEMRGHA 232 (312)
Q Consensus 199 leq~qaMEknL~~marEvekLrAEIanaekra~a 232 (312)
.+++.++..+.+....|.+|+..|...+.+-+.
T Consensus 105 -~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~~ 137 (411)
T 3ghg_C 105 -SSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQE 137 (411)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222344444666677888888888887766543
No 233
>2iaz_A Hypothetical protein SP1372; structural genomics, PSI-2, protei structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: a.281.1.2
Probab=51.40 E-value=82 Score=24.33 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=31.9
Q ss_pred HHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 021465 106 RVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVK 165 (312)
Q Consensus 106 R~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~q 165 (312)
-+++|+...|...++..+.++ .+.+++..++. -.+++.+-.++.+.+.+++
T Consensus 3 ~~I~d~A~eL~~~I~~s~ey~-~~~~a~~~i~~--------d~ea~~l~~~f~~~q~~~~ 53 (113)
T 2iaz_A 3 SNIYDSANELSRGLRGLPEYK-AVKAAKDAIAA--------DAEASKIFTDYLAFQEEIQ 53 (113)
T ss_dssp HHHHHHHHHHHHHHHTSHHHH-HHHHHHHHHHH--------CHHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHHcCHHHH-HHHHHHHHHHc--------CHHHHHHHHHHHHHHHHHH
Confidence 567888888888888888887 66666655553 1234444445555554333
No 234
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=51.40 E-value=1.2e+02 Score=26.37 Aligned_cols=53 Identities=19% Similarity=0.229 Sum_probs=39.3
Q ss_pred HHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 110 DKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEV 164 (312)
Q Consensus 110 ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~ 164 (312)
+|++|+...||..-+ .+|+.+-.-++.+..+++.-..++..+..+|+..+.-+
T Consensus 33 ekSa~L~eLirs~~P--eDL~~AN~LiK~m~~~d~~r~e~~~k~~~eLe~V~~nv 85 (186)
T 1oxz_A 33 EKSKMLARLLKSSHP--EDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNV 85 (186)
T ss_dssp THHHHHHHHHSCCSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCh--hhHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Confidence 456666666665544 35777777888888888888888888888888888644
No 235
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=51.35 E-value=16 Score=33.25 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=36.4
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhh---HHHHHHHHHhhhhhHh
Q 021465 54 VQAAEIERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESD---SHIRVLLDKIAKMEAD 118 (312)
Q Consensus 54 ~q~~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e---~qiR~L~ek~~k~Eae 118 (312)
.+-..+..+..++..+.+.+..|..++..++.+|.+|+.......++.. .+...||.++.|+.-+
T Consensus 138 ~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~~te~~p~~k~~~qly~~vt~i~w~ 205 (250)
T 2ve7_C 138 ACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWE 205 (250)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC-------------CTTTHHHHHHHHHHHCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhceee
Confidence 3444566777777777777888888888888888887777666666654 5666777777776433
No 236
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=51.21 E-value=53 Score=24.29 Aligned_cols=22 Identities=27% Similarity=0.373 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 021465 169 DLHAELDSLRQEHRRLRATFEY 190 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~ 190 (312)
.++..++.|..|++.+...++.
T Consensus 36 KL~Rk~DKl~~ele~l~~~l~~ 57 (65)
T 3sja_C 36 KNNRKLDSLDKEINNLKDEIQS 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 3444555555555555444443
No 237
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=51.05 E-value=1.6e+02 Score=27.68 Aligned_cols=33 Identities=9% Similarity=0.132 Sum_probs=21.9
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNIHTES 101 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~ 101 (312)
+......+++.+..+++++++|......-.+-.
T Consensus 15 ~~e~r~~lr~~~eql~~~i~~L~~~ap~W~~aq 47 (302)
T 3ibp_A 15 AREERMALRQEQEQLQSRIQSLMQRAPVWLAAQ 47 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 345567777888888888888877555444333
No 238
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=50.96 E-value=24 Score=26.35 Aligned_cols=8 Identities=0% Similarity=0.011 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 021465 131 QAHIEAQS 138 (312)
Q Consensus 131 q~r~e~q~ 138 (312)
++...+..
T Consensus 33 ~LE~~v~~ 40 (70)
T 1gd2_E 33 ALETQVVT 40 (70)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 239
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=50.92 E-value=1.2e+02 Score=26.23 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=23.6
Q ss_pred HHHHhHHHHHHhhhhhch---hhHHHHHHHHHhhhhhHhhh
Q 021465 83 AQQEIPRIKAHIRNIHTE---SDSHIRVLLDKIAKMEADCK 120 (312)
Q Consensus 83 aq~Elq~L~~~~~~~~ae---~e~qiR~L~ek~~k~Eaelr 120 (312)
-+.+|+++-+....++.. +=.|+|+.+|+++-.++-+.
T Consensus 35 ek~~l~~~e~~r~k~~~h~~~k~~qlre~~d~gtt~~~i~~ 75 (169)
T 3k29_A 35 EQEKLRERESERDKVKNHYMQKIRQLREQLDDGTTSDAILK 75 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 344444444444444333 35689999999998887665
No 240
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=50.79 E-value=50 Score=25.63 Aligned_cols=18 Identities=6% Similarity=0.228 Sum_probs=8.8
Q ss_pred hhHHHHHHHHHhhhhhHh
Q 021465 101 SDSHIRVLLDKIAKMEAD 118 (312)
Q Consensus 101 ~e~qiR~L~ek~~k~Eae 118 (312)
+|+.|++=+++..+.=.+
T Consensus 36 KElKiKeGaENL~katt~ 53 (86)
T 1cxz_B 36 KELKLKEGAENLRRATTD 53 (86)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhHHHHHHHHHh
Confidence 345555555555444333
No 241
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=50.61 E-value=79 Score=23.88 Aligned_cols=52 Identities=31% Similarity=0.364 Sum_probs=29.5
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHH
Q 021465 70 AASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIE 135 (312)
Q Consensus 70 a~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e 135 (312)
..+-.+|++-|++++.||. ++|.+||.|.+.+.-= -+..|.|-+|+.-+-.|
T Consensus 10 ~~~~~~~~~~l~~Lr~eL~-----------~Ke~eI~~L~e~i~lk---~kd~ErLNDEiislNIE 61 (75)
T 3a7o_A 10 VSHDDALLNTLAILQKELK-----------SKEQEIRRLKEVIALK---NKNTERLNDELISGTIE 61 (75)
T ss_dssp --CHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHh---cccHHHhhHHHHHhHHH
Confidence 3455677788888877775 3566787777655211 13344555555544444
No 242
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=50.44 E-value=1.3e+02 Score=26.39 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 143 RQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 143 rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
|+.+......+.+++..... .+...|..-+...+|++.++..
T Consensus 118 rK~~~~~~~k~~k~~~~~~~---~l~KaK~~Y~~~~~e~e~a~~~ 159 (305)
T 2efl_A 118 RKSNFHDGRKAQQHIETCWK---QLESSKRRFERDCKEADRAQQY 159 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444433332 3334444444444555544443
No 243
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=49.76 E-value=1e+02 Score=25.82 Aligned_cols=18 Identities=17% Similarity=0.377 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLAR 141 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~ 141 (312)
.+|.+|+.+-.++.++..
T Consensus 78 ~~k~~le~l~~~i~~~a~ 95 (180)
T 1s94_A 78 QMKEELEELMTDIKRTAN 95 (180)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444333
No 244
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=49.68 E-value=57 Score=26.18 Aligned_cols=66 Identities=12% Similarity=0.191 Sum_probs=51.0
Q ss_pred hhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 97 IHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 97 ~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
-++|.|..-+-|.++.--+.-+-=..+.|+.-..+++.-+.+|.+.+-+|-.++.....||..++.
T Consensus 19 ~q~e~EeKkkiLaER~~pL~id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~ 84 (107)
T 1ytz_T 19 KQTARETKKKVLAERRKPLNIDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRN 84 (107)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHH
Confidence 345555677788888866644433456788899999999999999999999999888888877664
No 245
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=49.59 E-value=85 Score=23.97 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRATFEY 190 (312)
Q Consensus 168 ~alraELe~LrqElq~~RaaiE~ 190 (312)
-.+...|+.|++|+..+|..+|.
T Consensus 23 ~~Lq~Ql~~Lq~Ev~~LRGqiE~ 45 (83)
T 2xdj_A 23 TQLQQQLSDNQSDIDSLRGQIQE 45 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHH
Confidence 34445556666666666665553
No 246
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=49.56 E-value=31 Score=28.31 Aligned_cols=61 Identities=8% Similarity=0.109 Sum_probs=33.1
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
|......|..+|..++++|+.|..++.--..- +..++..-|+|-..+.|+...
T Consensus 5 L~~~~~~L~~~i~~l~~~L~~lkqa~k~~~~~---------------------------~~~eL~~LI~KWr~asq~aae 57 (122)
T 3viq_A 5 LLSRRLKLEKEVRNLQEQLITAETARKVEAKN---------------------------EDKDLQTLIQKWKNAAQQAAE 57 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 44445566666666666666665532111111 122344556667777777777
Q ss_pred HHHHHHHH
Q 021465 149 KIQQASEA 156 (312)
Q Consensus 149 evq~l~~E 156 (312)
++....++
T Consensus 58 eLf~~~~~ 65 (122)
T 3viq_A 58 VLFKPMAE 65 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655544
No 247
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=49.31 E-value=4.8 Score=24.68 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=10.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHH
Q 021465 62 LARDNHRLAASHITMREDLAAA 83 (312)
Q Consensus 62 L~~dNqrLa~th~~L~qeL~aa 83 (312)
|--+|..|.....+|+|.++++
T Consensus 5 lefendaleqkiaalkqkiasl 26 (28)
T 3ra3_A 5 LEFENDALEQKIAALKQKIASL 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHh
Confidence 4444544444444444444443
No 248
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=48.99 E-value=60 Score=23.75 Aligned_cols=30 Identities=27% Similarity=0.484 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcHHh
Q 021465 169 DLHAELDSLRQEHRRLRATFEYEKGLNIDN 198 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~EKk~~~el 198 (312)
+++-|+..|++|....+..+|.|.+.+-.+
T Consensus 11 alkDev~eLk~e~k~~k~~le~eqraRk~L 40 (61)
T 3l4f_A 11 ALKDEVQELRQDNKKMKKSLEEEQRARKDL 40 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777788877777777777666544
No 249
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=48.88 E-value=11 Score=26.32 Aligned_cols=46 Identities=15% Similarity=0.307 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 183 RLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEM 228 (312)
Q Consensus 183 ~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanaek 228 (312)
.++.++.|..|++.++-.-+..+|.+-..+.+.+..|+.+|+|.+.
T Consensus 7 qlknrvayklkenaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 7 QLKNRVAYKLKENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp ----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3445555666666665555566777777777777888888887764
No 250
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=48.87 E-value=1e+02 Score=24.89 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 202 LQAMEKNLVGMAREMEKLHAEVVNAEMR 229 (312)
Q Consensus 202 ~qaMEknL~~marEvekLrAEIanaekr 229 (312)
.+.|+.++-.+.+-|+||+.+|.....+
T Consensus 76 ~~~le~k~Kk~~~kV~Kl~~dl~~rI~~ 103 (109)
T 2fcw_A 76 HALLEGRTKELGYTVKKHLQDLSGRISR 103 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999876643
No 251
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=48.62 E-value=1e+02 Score=24.53 Aligned_cols=49 Identities=14% Similarity=0.312 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLH 220 (312)
Q Consensus 172 aELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLr 220 (312)
++...-.+-...++++++.||..-.++..+++..+-.+..+.++++..+
T Consensus 39 aQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 39 TQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666788888899888888777777766666666666555555544
No 252
>3csx_A Putative uncharacterized protein; metalloprotein, nitrogen fixation, cyanobacteria, circadian rhythms, metal binding protein, unknown function; 1.84A {Cyanothece}
Probab=48.52 E-value=61 Score=24.94 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 127 KDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 127 ~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
.++..++.+++||.+.--++-.+++.|.++| -.+-++|+.+=++.=...+++..+|..
T Consensus 15 ~di~eLkkevkKL~~~A~q~kmdLHDLaEdL---P~~w~~i~~vA~~tyda~~~l~~ak~~ 72 (81)
T 3csx_A 15 EAVADLKKKVRKLNSKAGQMKMDLHDLAEGL---PTDYENLVETAEKTYEIFRELDQLKKK 72 (81)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHT---TTTGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677788888887777778888888875 333345655555555555555555554
No 253
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=48.39 E-value=77 Score=23.71 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
+|.++..--.|-|.|...+-.|-.++..-++-|+
T Consensus 24 ~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLE 57 (74)
T 2xv5_A 24 MRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444555555555555555555554443
No 254
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=48.32 E-value=60 Score=31.48 Aligned_cols=27 Identities=11% Similarity=0.298 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKI 150 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aev 150 (312)
.|+.||.+++..+++|....+++.+++
T Consensus 7 ~l~~el~~~~~~~~~l~~~~~~~~~~~ 33 (412)
T 3u06_A 7 ALSTEVVHLRQRTEELLRCNEQQAAEL 33 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444333333333333
No 255
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=47.78 E-value=66 Score=24.18 Aligned_cols=57 Identities=9% Similarity=0.138 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
++..++.+++||.+.--+.-.++..|.++| -.+-++|+.+=++.=..-+++..+|+.
T Consensus 4 di~eLkkevkKL~~~A~q~kmdLHDLaEdL---P~~w~~i~~vA~~tyda~~~l~~ak~~ 60 (71)
T 2js5_A 4 GAEELKAKLKKLNAQATALKMDLHDLAEDL---PTGWNRIMEVAEKTYEAYRQLDEFRKS 60 (71)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHST---TTSGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHhccc---hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777777777777777777764 333345555555554445555555543
No 256
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=47.75 E-value=1.9e+02 Score=28.22 Aligned_cols=25 Identities=16% Similarity=0.270 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhHHHHHHhhhhhch
Q 021465 76 MREDLAAAQQEIPRIKAHIRNIHTE 100 (312)
Q Consensus 76 L~qeL~aaq~Elq~L~~~~~~~~ae 100 (312)
+-++|+.+..++..|...|.+.-.+
T Consensus 46 ~l~elsn~ts~v~~Lvk~iq~~~~~ 70 (409)
T 1m1j_C 46 LLQQATNSTGSIEYLIQHIKTIYPS 70 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3356666666777666666555333
No 257
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=47.23 E-value=1.1e+02 Score=24.54 Aligned_cols=23 Identities=9% Similarity=0.234 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 139 LARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 139 L~~~rqeL~aevq~l~~EL~r~k 161 (312)
|-+.+..|+=+|..|+..|+-..
T Consensus 21 LDNEKsal~YqVdlLKD~LEe~e 43 (103)
T 4h22_A 21 LDNEKTNFMYQVDTLKDMLLELE 43 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHH
Confidence 44455556666666666555544
No 258
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=46.60 E-value=65 Score=28.17 Aligned_cols=13 Identities=8% Similarity=0.054 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQ 137 (312)
Q Consensus 125 lk~EL~q~r~e~q 137 (312)
++.++.++++++.
T Consensus 58 ~~~~l~~a~a~l~ 70 (277)
T 2f1m_A 58 YQATYDSAKGDLA 70 (277)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455665555443
No 259
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=46.42 E-value=1.2e+02 Score=24.97 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=9.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHhHH
Q 021465 67 HRLAASHITMREDLAAAQQEIPR 89 (312)
Q Consensus 67 qrLa~th~~L~qeL~aaq~Elq~ 89 (312)
.+|......|+.++..+..++..
T Consensus 25 ~~l~~eN~~Lk~e~e~l~~~~~~ 47 (155)
T 2oto_A 25 IRLRHENKDLKARLENAMEVAGR 47 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443333
No 260
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=46.33 E-value=76 Score=26.29 Aligned_cols=22 Identities=27% Similarity=0.468 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIa 224 (312)
...++.+..-..|.+|.++++.
T Consensus 99 e~le~~la~KkAEleKtqa~Ld 120 (125)
T 2pms_C 99 EGLEKTIAAKKAELEKTEADLK 120 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555556666655554
No 261
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=46.21 E-value=16 Score=33.29 Aligned_cols=27 Identities=19% Similarity=0.110 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 135 EAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 135 e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
....+....+++.++++.+..|+...+
T Consensus 142 ~~~e~~~~~e~~~~~i~ql~~En~~le 168 (250)
T 2ve7_C 142 TYMEFLWQYKSSADKMQQLNAAHQEAL 168 (250)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455555555544444
No 262
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=46.15 E-value=64 Score=31.06 Aligned_cols=20 Identities=10% Similarity=0.199 Sum_probs=9.1
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 168 ~alraELe~LrqElq~~Raa 187 (312)
..+..+++.++.++..++..
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~ 39 (403)
T 4etp_A 20 AALKEKIKDTELGMKELNEI 39 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 263
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=45.98 E-value=37 Score=28.22 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 153 ASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 153 l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
|++++...+..+..+++++++++.|++++..+...
T Consensus 3 L~~~~~~k~~~aa~L~~l~~ql~~l~~~l~~l~~~ 37 (147)
T 2rjz_A 3 LKQQFSTKAFQAANLEAYKAQMKEMEESFGALLRQ 37 (147)
T ss_dssp HHHHHHHTGGGCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 67777777777777777777777777776655543
No 264
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=45.83 E-value=75 Score=23.84 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=25.1
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHH
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~ 92 (312)
++.+-..|+.|-.....|+++|...+++=.+++.
T Consensus 9 Lq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~ 42 (72)
T 3cve_A 9 LQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRS 42 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566778888888888888888887766666655
No 265
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=45.74 E-value=2.1e+02 Score=27.35 Aligned_cols=36 Identities=8% Similarity=0.250 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
+.+.+..-.+.++..++.+...++.|..+++....+
T Consensus 199 e~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 234 (373)
T 3hhm_B 199 EIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAE 234 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555555555554444444443333
No 266
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=45.35 E-value=2.3e+02 Score=27.67 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=27.7
Q ss_pred HHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 105 IRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 105 iR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
+-.++|+..++..+.-..+.-+.-|+-++.|+..|-..-++|..-+..+..-++
T Consensus 213 LT~HyDqC~~l~~~~~s~~e~~elleVv~~Da~EL~~V~~eL~~~~~~i~~~~~ 266 (413)
T 4hpq_C 213 FTDHFDKCSALSSRSVSPEDAQNLFEIVERDDKDLAAINSLLQDAAIDVASFVR 266 (413)
T ss_dssp HHHHHHHHHHTTTTSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCChHhHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 344567777665543333334444455566666655555555554444444433
No 267
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=45.15 E-value=75 Score=24.26 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTS 148 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~a 148 (312)
+|.=++++-..|..|...|+.|..
T Consensus 50 lk~l~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 50 VGRAAQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344444555777778877777754
No 268
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=44.84 E-value=82 Score=24.81 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=18.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 021465 168 PDLHAELDSLRQEHRRLRATFEYEKGLNID 197 (312)
Q Consensus 168 ~alraELe~LrqElq~~RaaiE~EKk~~~e 197 (312)
..++..++.|..|++.+...+...+..+..
T Consensus 52 aKL~Rk~DKl~~ele~l~~~l~~~k~~F~~ 81 (93)
T 3sjb_C 52 TKNNRKLDSLDKEINNLKDEIQSENKAFQA 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446666777777777777666655555433
No 269
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=44.61 E-value=1.3e+02 Score=24.72 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=14.6
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHHhhhh
Q 021465 69 LAASHITMREDLAAAQQEIPRIKAHIRNI 97 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq~L~~~~~~~ 97 (312)
|-..|..++.+|.+-+.-++.+......+
T Consensus 38 ll~kh~~~~~ei~~~~~~v~~v~~~g~~L 66 (213)
T 1cun_A 38 LRKKHKRLEAELAAHEPAIQSVLDTGKKL 66 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34445555566655555555554443333
No 270
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=44.25 E-value=62 Score=31.36 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASE 155 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~ 155 (312)
++.++..++..+.+....|+.|..+++.++.
T Consensus 29 ~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~g 59 (412)
T 3u06_A 29 QAAELETCKEQLFQSNMERKELHNTVMDLRD 59 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3444444444555555666666666666654
No 271
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=44.07 E-value=3e+02 Score=28.74 Aligned_cols=47 Identities=23% Similarity=0.294 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAEL 174 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraEL 174 (312)
+|.+....++.+..+|.+|..++|..++.....-.+..+++..-++|
T Consensus 11 dl~~i~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 57 (706)
T 3fhn_A 11 DLLNINDRIKQVQNERNELASKLQNLKQSLASNDTEVALSEVIAQDI 57 (706)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCCCHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 56677788888899999999999999886655555555555444444
No 272
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=43.29 E-value=1.5e+02 Score=25.06 Aligned_cols=10 Identities=10% Similarity=0.411 Sum_probs=5.1
Q ss_pred HHHHHHHHHH
Q 021465 215 EMEKLHAEVV 224 (312)
Q Consensus 215 EvekLrAEIa 224 (312)
.++.|+..|+
T Consensus 151 ~~eeLr~kL~ 160 (165)
T 1gs9_A 151 DADDLQKRLA 160 (165)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHhh
Confidence 5555555443
No 273
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=43.20 E-value=51 Score=31.93 Aligned_cols=27 Identities=7% Similarity=0.263 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 124 RLKKDLQQAHIEAQSLARARQELTSKI 150 (312)
Q Consensus 124 ~lk~EL~q~r~e~q~L~~~rqeL~aev 150 (312)
.+++++.+++.+++.|...-.++.+++
T Consensus 72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (425)
T 2dq3_A 72 EIQNRVKELKEEIDRLEEELRKVEEEL 98 (425)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444333333333333
No 274
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=43.04 E-value=32 Score=30.74 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
-|+|+|++.-++++.-++|+.....++.|+...+.
T Consensus 31 ~~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~ 65 (206)
T 3oa7_A 31 ALQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRS 65 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 46678888888877777777666665555555443
No 275
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=42.91 E-value=68 Score=22.08 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 021465 216 MEKLHAEVVNAE 227 (312)
Q Consensus 216 vekLrAEIanae 227 (312)
+..||.||++.+
T Consensus 33 ianlrdeiarle 44 (52)
T 3he5_B 33 IANLRDEIARLE 44 (52)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444433
No 276
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=42.55 E-value=87 Score=23.56 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIan 225 (312)
+.+++.|.+...++.+|+.+|-+
T Consensus 43 ~eLEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 43 DELELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666666666666666543
No 277
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=42.49 E-value=44 Score=23.61 Aligned_cols=34 Identities=12% Similarity=0.355 Sum_probs=17.1
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHH
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKA 92 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~ 92 (312)
+..|-..-..|......|+.++..++.|+..|..
T Consensus 24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~ 57 (61)
T 1t2k_D 24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQ 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444445555555555555555555544
No 278
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=42.42 E-value=42 Score=22.60 Aligned_cols=30 Identities=27% Similarity=0.450 Sum_probs=21.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021465 166 NLPDLHAELDSLRQEHRRLRATFEYEKGLN 195 (312)
Q Consensus 166 ql~alraELe~LrqElq~~RaaiE~EKk~~ 195 (312)
+++.--+||..|+.-+.-+++.+|+|...+
T Consensus 14 eleernaelknlkehlkfakaelefelaah 43 (46)
T 3he4_B 14 ELEERNAELKNLKEHLKFAKAELEFELAAH 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHHHHHHhh
Confidence 444455788888888888888888887654
No 279
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=42.08 E-value=17 Score=29.89 Aligned_cols=13 Identities=0% Similarity=0.169 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHH
Q 021465 126 KKDLQQAHIEAQS 138 (312)
Q Consensus 126 k~EL~q~r~e~q~ 138 (312)
+.+++.++.++++
T Consensus 5 ~~~~~~l~~~~~~ 17 (182)
T 3kqg_A 5 NAQIPELKSDLEK 17 (182)
T ss_dssp --------CHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 3444444444443
No 280
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=42.04 E-value=39 Score=30.23 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=24.8
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 61 RLARDNHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 61 ~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
.-+.+|..|......|+.+++.+++|+..|+..
T Consensus 112 eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeL 144 (209)
T 2wvr_A 112 EALKENEKLHKEIEQKDNEIARLKKENKELAEV 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888888887777777663
No 281
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=41.96 E-value=1.2e+02 Score=23.54 Aligned_cols=55 Identities=11% Similarity=0.135 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 171 HAELDSLRQEHRRLRAT---FEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 171 raELe~LrqElq~~Raa---iE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
++.|......++.+..- +++|...-. ......|...+-...+++++|+.++.++.
T Consensus 37 k~~i~~ie~~l~EA~ell~qMelE~r~~p--~~~R~~~~~klr~Yk~dL~~lk~elk~~~ 94 (102)
T 1vcs_A 37 KQMVANVEKQLEEARELLEQMDLEVREIP--PQSRGMYSNRMRSYKQEMGKLETDFKRSR 94 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSC--TTTHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444443 333433321 11224555555666666666666665544
No 282
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=41.82 E-value=30 Score=21.13 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=9.5
Q ss_pred hhhhHHHHHHHHHHHHHHhH
Q 021465 69 LAASHITMREDLAAAQQEIP 88 (312)
Q Consensus 69 La~th~~L~qeL~aaq~Elq 88 (312)
|......|+|+++++.-||-
T Consensus 5 lkqknarlkqeiaaleyeia 24 (28)
T 3ra3_B 5 LKQKNARLKQEIAALEYEIA 24 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHH
Confidence 33334444555555555443
No 283
>3brv_B NF-kappa-B essential modulator; NEMO, IKK-gamma, FIP3, ikkap1, NF-KB essential modulator, at binding, kinase, nucleotide-binding, phosphoprotein; 2.20A {Homo sapiens} PDB: 3brt_B
Probab=41.32 E-value=99 Score=23.17 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=26.0
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhH
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDS 103 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~ 103 (312)
+++|+.||+-|..+ |+|.=...++=..-|...-.+-+.|+|.
T Consensus 10 ~q~ll~EN~~LreA---lkqsNq~mkeR~eeL~~wqekQkeEref 51 (70)
T 3brv_B 10 LQRCLEENQELRDA---IRQSNQILRERCEELLHFQASQREEKEF 51 (70)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 67899999999764 4555555555444555444455555543
No 284
>3r4h_A Coiled coil helix CC-TET-PHI22; coiled coil domain, tetramer, KIH interactions, synthetic BI NOVO protein; HET: PHI; 2.70A {Synthetic}
Probab=41.26 E-value=40 Score=21.43 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhh
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNI 97 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~ 97 (312)
+.+++|+|++.+.||-.+.-.+..|
T Consensus 4 laaikqelaaikkelaaikfelaai 28 (34)
T 3r4h_A 4 LAAIKQELAAIKKELAAIKFELAAI 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777777776665544443
No 285
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=41.23 E-value=55 Score=27.02 Aligned_cols=53 Identities=17% Similarity=0.202 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 021465 131 QAHIEAQSLARARQELTSKIQQASEALHKA--RLEVKNLPDLHAELDSLRQEHRRLRATFEY 190 (312)
Q Consensus 131 q~r~e~q~L~~~rqeL~aevq~l~~EL~r~--kad~qql~alraELe~LrqElq~~RaaiE~ 190 (312)
+++.|+|+ |...+..++..++.+ +.|.-.+.....|++.|.++|.+++..-.+
T Consensus 7 ~~K~Eiq~-------L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~~lk~~q~~ 61 (123)
T 2lf0_A 7 VEKNEIKR-------LSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQ 61 (123)
T ss_dssp SHHHHHHH-------HHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555554 455666777766543 345556677778888888888888775443
No 286
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=41.14 E-value=5.7 Score=38.62 Aligned_cols=53 Identities=21% Similarity=0.206 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~k 161 (312)
+.++...|..++|++++.. =.++++.+-++|...-++|..+...++++|...+
T Consensus 323 ~~~~~~~~~~~~e~~~~~~-----f~~~v~~~~~~~~~~e~~l~~~~~~~~~~l~~~~ 375 (418)
T 2qag_C 323 ERREHVAKMKKMEMEMEQV-----FEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQH 375 (418)
T ss_dssp ----------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677777665421 1245666667777777777777777777776655
No 287
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=40.79 E-value=1.1e+02 Score=27.22 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 211 GMAREMEKLHAEVVNAEM 228 (312)
Q Consensus 211 ~marEvekLrAEIanaek 228 (312)
.+..=++-+...+.++-.
T Consensus 137 ~l~eGvemi~k~l~~~L~ 154 (213)
T 4ani_A 137 SILQGMEMVYRSLVDALK 154 (213)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445555555555543
No 288
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=40.75 E-value=1.8e+02 Score=26.91 Aligned_cols=123 Identities=15% Similarity=0.177 Sum_probs=0.0
Q ss_pred hhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH-----HHHHHHHHH
Q 021465 115 MEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQE-----HRRLRATFE 189 (312)
Q Consensus 115 ~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqE-----lq~~RaaiE 189 (312)
.+.-+..++.+..+++++..++ +...+.+.+.++..++++|-+.+. -+-.++.-+..|... -...+.-+.
T Consensus 190 vd~y~~~l~~l~~~id~lE~~v--~~~~~~~~l~~l~~lrr~l~~lrr---~l~p~~~vl~~L~~~~~~~~~~~~~~~lr 264 (363)
T 2iub_A 190 VDDYFVLLEKIDDEIDVLEEEV--LERPEKETVQRTHQLKRNLVELRK---TIWPLREVLSSLYRDVPPLIEKETVPYFR 264 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--TSSCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHSCCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcccccCCHHHHHHHH
Q ss_pred HHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------------CCCCccccCC
Q 021465 190 YEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEMRGHA------------PNPYSRTYTN 242 (312)
Q Consensus 190 ~EKk~~~elleq~qaMEknL~~marEvekLrAEIanaekra~a------------~~~y~~~~~n 242 (312)
.=.......++.++.+...+..+......+-..-.|...+.=. ++-||+|+.+
T Consensus 265 Dv~d~~~~~~e~~~~~re~l~~l~d~~~s~is~~~N~imk~LTiit~IflP~T~IaGiyGMNf~~ 329 (363)
T 2iub_A 265 DVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNFEY 329 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
No 289
>1lwu_A Fibrinogen alpha-1 chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: h.1.8.1 PDB: 1n73_A*
Probab=40.55 E-value=54 Score=26.93 Aligned_cols=47 Identities=11% Similarity=0.117 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 178 RQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 178 rqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
.+=.+.+|..|++-|..-.+++.+++.+.+|+...--++..|+-+|-
T Consensus 21 ~qvsedLrrrIe~LkrKV~~Qvq~i~~Lq~nVrdQvveMkRLEVDID 67 (119)
T 1lwu_A 21 SEVLRELERRIIHLQRRINMQLQQLTLLQHNIKTQVSQILRVEVDID 67 (119)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 35566778889999999999999999999999999999999998876
No 290
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=39.73 E-value=2.1e+02 Score=25.77 Aligned_cols=6 Identities=17% Similarity=0.102 Sum_probs=2.8
Q ss_pred hhHHHH
Q 021465 47 LLEDKI 52 (312)
Q Consensus 47 ~lE~~l 52 (312)
.|-.++
T Consensus 24 ~l~~r~ 29 (337)
T 2x3v_A 24 RTVKRI 29 (337)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
No 291
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=39.46 E-value=2.2e+02 Score=25.93 Aligned_cols=7 Identities=14% Similarity=0.074 Sum_probs=3.5
Q ss_pred hhHHHHH
Q 021465 47 LLEDKIA 53 (312)
Q Consensus 47 ~lE~~l~ 53 (312)
+|-.++.
T Consensus 33 ~L~~r~~ 39 (350)
T 3aco_A 33 RTVKRID 39 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555553
No 292
>1m5i_A APC protein; coiled-coil, antitumor protein; 2.00A {Homo sapiens} SCOP: h.4.13.1
Probab=39.02 E-value=1.6e+02 Score=24.22 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhcHHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 180 EHRRLRATFEYEKGLNIDNVEQL----QAMEKNLVGMAREMEKLHAEVVNAEMR 229 (312)
Q Consensus 180 Elq~~RaaiE~EKk~~~elleq~----qaMEknL~~marEvekLrAEIanaekr 229 (312)
.....|..+|||-..-...|++. +.|++--..=+..++.|..+|..+..+
T Consensus 56 Q~D~iRqQLefEa~~irs~mEEr~Gt~deM~qRaQiRv~r~qqIe~eil~iq~~ 109 (125)
T 1m5i_A 56 QTDMTRRQLEYEARQIRVAMEEQLGTCQDMEKRAQRRIARIQQIEKDILRIRQL 109 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 33444444455444444455544 666666555566777777777766533
No 293
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=38.89 E-value=2e+02 Score=25.10 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=11.4
Q ss_pred Cch-hhHHHHHHHHHHHHhhhhhh
Q 021465 44 PLP-LLEDKIAVQAAEIERLARDN 66 (312)
Q Consensus 44 p~p-~lE~~l~~q~~Ei~~L~~dN 66 (312)
|+| .|.+. =..|++.|+.+.
T Consensus 30 ~LP~~L~~L---S~~eL~~LL~~~ 50 (192)
T 2p22_C 30 PLPEGINLL---SSKEIIDLIQTH 50 (192)
T ss_dssp CCSSGGGSC---TTHHHHHHHHHC
T ss_pred CCCHHHHhC---CHHHHHHHHhCh
Confidence 455 55553 233677777776
No 294
>3b2e_E Golgi to ER traffic protein 1; protein-protein interaction, receptor complex, hydrolase, TR protein, ADP binding, coild-coil; HET: ADP; 3.00A {Saccharomyces cerevisiae} PDB: 3zs8_C
Probab=44.94 E-value=6.5 Score=30.58 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
+....|+.|+.+++.|.....++|+ .++-..|++.+.+.. .||+.+.+++...++.|.
T Consensus 20 ~~~~~Lk~Ei~~lk~E~~stSaQDE--FAKWAKL~Rk~dKl~----------~ele~~~k~l~~~k~~f~ 77 (84)
T 3b2e_E 20 KKYLAKVKERHELKEFNNSISAQDN--YAKWTKNNRKLDSLD----------KEINNLKDEIQSENKAFQ 77 (84)
Confidence 3445678888888888888777764 455555555555544 666666666666666554
No 295
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=38.45 E-value=1.4e+02 Score=23.19 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQEL 146 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL 146 (312)
+.+|.+|+.+-.++.++...-+..
T Consensus 46 ~~~~~~l~~l~~~i~~~a~~ik~~ 69 (127)
T 1ez3_A 46 EKTKEELEELMSDIKKTANKVRSK 69 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777777777777665544333
No 296
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=38.30 E-value=1.2e+02 Score=22.53 Aligned_cols=18 Identities=17% Similarity=0.322 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 205 MEKNLVGMAREMEKLHAE 222 (312)
Q Consensus 205 MEknL~~marEvekLrAE 222 (312)
+...+..+....+.|...
T Consensus 83 i~~~l~~l~~rw~~L~~~ 100 (118)
T 3uul_A 83 IQEQMTLLNARWEALRVE 100 (118)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444333
No 297
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=38.26 E-value=1.2e+02 Score=22.46 Aligned_cols=6 Identities=17% Similarity=0.412 Sum_probs=2.2
Q ss_pred HHHHHH
Q 021465 174 LDSLRQ 179 (312)
Q Consensus 174 Le~Lrq 179 (312)
++.|+.
T Consensus 87 l~~l~~ 92 (119)
T 3uun_A 87 MNLLNS 92 (119)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 298
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=38.25 E-value=59 Score=24.49 Aligned_cols=10 Identities=40% Similarity=0.441 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 021465 150 IQQASEALHK 159 (312)
Q Consensus 150 vq~l~~EL~r 159 (312)
++.|+.+|.+
T Consensus 56 I~~LqseLDK 65 (72)
T 3nmd_A 56 IQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 299
>2d4y_A HAP1, flagellar HOOK-associated protein 1; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 2.10A {Salmonella typhimurium}
Probab=37.98 E-value=1.4e+02 Score=28.71 Aligned_cols=75 Identities=11% Similarity=0.117 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHH
Q 021465 133 HIEAQSLARARQELTSKIQQASEAL-HKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNL 209 (312)
Q Consensus 133 r~e~q~L~~~rqeL~aevq~l~~EL-~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL 209 (312)
-..++.|...=+.+..+++.++.++ ...+..+.+|..+-.+|..|.++|.+.+..- --..-.++++|.+.+-.+|
T Consensus 70 l~~a~~La~~~n~~~~~L~~~~~~~n~~i~~~V~~iN~l~~qIa~LN~qI~~~~~~~--~g~~~ndLlDqRD~ll~eL 145 (463)
T 2d4y_A 70 IGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLNDQISRMTGVG--AGASPNDLLDQRDQLVSEL 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCchHhHHHHHHHHHHH
Confidence 3444445555555555555555555 2334444566666666666666665443200 0123456777765444433
No 300
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=37.84 E-value=52 Score=25.71 Aligned_cols=36 Identities=11% Similarity=0.219 Sum_probs=21.6
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 58 EIERLARDNHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 58 Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
++..|-.+|..|......|+++++....|+..+..-
T Consensus 49 q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k 84 (90)
T 2wt7_B 49 QKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVK 84 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666666666666666666666665553
No 301
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Probab=37.79 E-value=4.1e+02 Score=28.48 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=14.5
Q ss_pred hhhhhhhhhHHHHHHH-HHHHHHHhHHHHH
Q 021465 64 RDNHRLAASHITMRED-LAAAQQEIPRIKA 92 (312)
Q Consensus 64 ~dNqrLa~th~~L~qe-L~aaq~Elq~L~~ 92 (312)
+.-|-=++.|++++.+ -+...-|.|+|..
T Consensus 666 T~sqEa~Ar~~A~~~eQea~g~Lerqki~d 695 (861)
T 2zuo_A 666 TNSQEAAAKHEAQRLEQEARGRLERQKILD 695 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhHHHHHHHHhhhhHHHHHHHH
Confidence 3345555666665554 2333445555544
No 302
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=37.67 E-value=1.1e+02 Score=21.78 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 021465 169 DLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 169 alraELe~LrqElq~~Raa 187 (312)
.|+.+|+.|+.|+..++..
T Consensus 41 ~L~~ei~~L~~e~~~Lk~~ 59 (63)
T 2wt7_A 41 ALQTEIANLLKEKEKLEFI 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555543
No 303
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=37.36 E-value=16 Score=22.33 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=15.5
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHH
Q 021465 59 IERLARDNHRLAASHITMREDLAAA 83 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aa 83 (312)
|+||--.|-||.....+|+=+++++
T Consensus 2 irrlkqknarlkqeiaaleyeiaal 26 (28)
T 3ra3_B 2 IRRLKQKNARLKQEIAALEYEIAAL 26 (28)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHh
Confidence 4556666666666666666666655
No 304
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=37.06 E-value=40 Score=31.01 Aligned_cols=39 Identities=23% Similarity=0.367 Sum_probs=25.1
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhh
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNI 97 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~ 97 (312)
+..|..++..|......|..+|..+++||.+|+..+..+
T Consensus 56 l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL 94 (251)
T 3m9b_A 56 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 94 (251)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555666666666666666667777777766666654444
No 305
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=37.02 E-value=1.6e+02 Score=23.43 Aligned_cols=74 Identities=20% Similarity=0.195 Sum_probs=42.6
Q ss_pred HHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Q 021465 105 IRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRL 184 (312)
Q Consensus 105 iR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~ 184 (312)
|+.-.-|+..+=.| .+++.|=.-|-..|..+=+......+....+..+...|.+.+ ..|+-|+.||.|....
T Consensus 20 mksn~~RGrsi~nD-ssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~yE~LQDkL~qi~-------eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 20 MKSNHMRGRSITND-SAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIR-------DARGALSALREEHREK 91 (98)
T ss_dssp HHHHHHHTCCGGGC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 33344444444322 234445555555566555555555666666666666665555 5778888888888655
Q ss_pred HH
Q 021465 185 RA 186 (312)
Q Consensus 185 Ra 186 (312)
..
T Consensus 92 lr 93 (98)
T 3f1i_H 92 LR 93 (98)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 306
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=37.02 E-value=2.8e+02 Score=26.26 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=10.2
Q ss_pred hhhhhhhhhhhHHHHHHHHH
Q 021465 62 LARDNHRLAASHITMREDLA 81 (312)
Q Consensus 62 L~~dNqrLa~th~~L~qeL~ 81 (312)
|+.+...++..|..+-..|.
T Consensus 77 ll~ete~~a~~H~~lae~L~ 96 (406)
T 4dyl_A 77 ITSQTEGLSRLLRQHAEDLN 96 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555544443
No 307
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=36.92 E-value=2.2e+02 Score=25.12 Aligned_cols=15 Identities=20% Similarity=0.131 Sum_probs=7.4
Q ss_pred HHHHHHHhhcHHhHH
Q 021465 186 ATFEYEKGLNIDNVE 200 (312)
Q Consensus 186 aaiE~EKk~~~elle 200 (312)
..+=.|||.+...+.
T Consensus 181 ~~lLNeKK~KIR~lq 195 (213)
T 1ik9_A 181 ILVLNEKKTKIRSLH 195 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHH
Confidence 334446665554444
No 308
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1
Probab=36.70 E-value=1.9e+02 Score=29.61 Aligned_cols=102 Identities=18% Similarity=0.120 Sum_probs=0.0
Q ss_pred hchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Q 021465 98 HTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSL 177 (312)
Q Consensus 98 ~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~L 177 (312)
+.|-|.++.+|..+...+|.+++-++.+.++..=-..+.++. ... ........+.+.+ ..++.+
T Consensus 4 ~~~i~~~~~~l~~~~q~~e~~~k~Le~~Qe~f~~~y~~~~~~-~~~-----~~~~~~~~~~~~~----------~~l~~~ 67 (575)
T 1bf5_A 4 QKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNR-EHE-----TNGVAKSDQKQEQ----------LLLKKM 67 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC-----------------------------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh-hhh-----hccccHHHHHHHH----------HHHHHH
Q ss_pred HHHHHHHHHHHHHHHhhcHHhHHHH--HHHHHHHHHHHHH
Q 021465 178 RQEHRRLRATFEYEKGLNIDNVEQL--QAMEKNLVGMARE 215 (312)
Q Consensus 178 rqElq~~RaaiE~EKk~~~elleq~--qaMEknL~~marE 215 (312)
-..+...|..+-...+.-...++.+ ..+.+.|+...+.
T Consensus 68 ~~~l~~~R~~~~~~~~~~~~~~~~lq~~ll~~eL~~Wkrr 107 (575)
T 1bf5_A 68 YLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRR 107 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 309
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=36.47 E-value=63 Score=22.64 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 120 KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASE 155 (312)
Q Consensus 120 ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~ 155 (312)
++...=+..+.++...+..|......|..++..+++
T Consensus 15 rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~ 50 (55)
T 1dh3_A 15 ESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKD 50 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555555555554444444444444443
No 310
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=36.45 E-value=87 Score=23.50 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHhhhhhchh
Q 021465 73 HITMREDLAAAQQEIPRIKAHIRNIHTES 101 (312)
Q Consensus 73 h~~L~qeL~aaq~Elq~L~~~~~~~~ae~ 101 (312)
.-.|...|-.-|+||.+|+..+..+++.-
T Consensus 5 NKeL~~kl~~Kq~EI~rLnvlvgslR~KL 33 (74)
T 2q6q_A 5 NKELNFKLREKQNEIFELKKIAETLRSKL 33 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466777888899999988887777654
No 311
>2d4x_A Flagellar HOOK-associated protein 3; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 1.90A {Salmonella typhimurium}
Probab=36.36 E-value=1.5e+02 Score=25.78 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=18.4
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQA 153 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l 153 (312)
+.+|.++++.++.++.-+.....-++--...-.++..-++.+
T Consensus 11 ~~~l~~~~~~l~q~~~n~~~~~s~l~~ae~aL~~i~~~l~r~ 52 (248)
T 2d4x_A 11 AVVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTA 52 (248)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555444444443333333333333333
No 312
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=36.02 E-value=1.9e+02 Score=24.17 Aligned_cols=153 Identities=13% Similarity=0.102 Sum_probs=64.6
Q ss_pred hhhhhHHHHHHHHHH-HHHHhHHHHHHhhhhhchh---hHHHHHHHHHhhhhhHhh-hhhHHHHHHHHHHHHHHHHHHHH
Q 021465 68 RLAASHITMREDLAA-AQQEIPRIKAHIRNIHTES---DSHIRVLLDKIAKMEADC-KAGERLKKDLQQAHIEAQSLARA 142 (312)
Q Consensus 68 rLa~th~~L~qeL~a-aq~Elq~L~~~~~~~~ae~---e~qiR~L~ek~~k~Eael-ra~e~lk~EL~q~r~e~q~L~~~ 142 (312)
.|-..|..++.+|.+ -+.-+..++.....+.... ...|+...+....-=..| ...+.=+..|..+ .++++|...
T Consensus 38 ~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a-~~~~~F~~~ 116 (218)
T 3edu_A 38 LLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAAS-YDLHRYFYT 116 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 444567777777776 4566666666555554432 112222222221111112 1112222233333 245555555
Q ss_pred HHHHHHHHHHHHH--------HHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHH
Q 021465 143 RQELTSKIQQASE--------ALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAR 214 (312)
Q Consensus 143 rqeL~aevq~l~~--------EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~mar 214 (312)
-.++..-+..-.. ++.-.++-.++...+..+|......+..++..-..-...+. -++.......+..+..
T Consensus 117 ~~e~~~Wl~ek~~~l~~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~--~~~a~~i~~~~~~l~~ 194 (218)
T 3edu_A 117 GAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYA--GEKAEAIQNKEQEVSA 194 (218)
T ss_dssp HHHHHHHHHHHHHCCC-------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--chhHHHHHHHHHHHHH
Confidence 5555444433222 23333333334445555555555555555544332222221 0123445555555555
Q ss_pred HHHHHHHHH
Q 021465 215 EMEKLHAEV 223 (312)
Q Consensus 215 EvekLrAEI 223 (312)
..+.|..-.
T Consensus 195 ~W~~L~~~~ 203 (218)
T 3edu_A 195 AWQALLDAC 203 (218)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 555554443
No 313
>1sfc_A VAMP 2, protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=35.99 E-value=1.5e+02 Score=22.91 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=19.3
Q ss_pred HHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHH
Q 021465 105 IRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQS 138 (312)
Q Consensus 105 iR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~ 138 (312)
|..+++++-|||....-.+.|.....+-+..+.+
T Consensus 50 I~kvLeRGEkLd~L~dkse~L~~~S~~F~k~A~k 83 (96)
T 1sfc_A 50 VDKVLERDQKLSELDDRADALQAGASQFETSAAK 83 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777775555555555555544444444
No 314
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=35.78 E-value=1.1e+02 Score=23.73 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 021465 150 IQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRAT 187 (312)
Q Consensus 150 vq~l~~EL~r~kad~qql~alraELe~LrqElq~~Raa 187 (312)
++.|++||+.+.. ++--+||..-.+.|..+|+.
T Consensus 38 i~~Lt~eLq~A~~-----eaNpaeIA~~~~~L~qAraD 70 (90)
T 4b6x_A 38 VNNLTDELQDAID-----EANPAEIANTSQQLRHARAD 70 (90)
T ss_dssp HHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----ccCHHHHHhHHHHHHHHHHH
Confidence 5566666666554 22335555555556666654
No 315
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=35.74 E-value=1.6e+02 Score=23.24 Aligned_cols=10 Identities=20% Similarity=0.262 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 021465 173 ELDSLRQEHR 182 (312)
Q Consensus 173 ELe~LrqElq 182 (312)
+++..++++.
T Consensus 96 ~~e~~r~~l~ 105 (150)
T 3ajw_A 96 KVDLALKSWR 105 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 316
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Probab=35.63 E-value=3.8e+02 Score=27.46 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
++++...+...+..|.-.|++++.+.+.+-..+...+.
T Consensus 70 ~~~~~~~l~~~~~~l~~~R~e~~~k~~~~l~~~~~lq~ 107 (596)
T 1bg1_A 70 TRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQK 107 (596)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556677777777888888777776666655443
No 317
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=35.62 E-value=25 Score=25.03 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=12.5
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHHH
Q 021465 56 AAEIERLARDNHRLAASHITMREDLAA 82 (312)
Q Consensus 56 ~~Ei~~L~~dNqrLa~th~~L~qeL~a 82 (312)
+.++..|-.+|..|......|+.++..
T Consensus 28 e~~v~~L~~~n~~L~~~v~~L~~e~~~ 54 (62)
T 1jnm_A 28 EEKVKTLKAQNSELASTANMLREQVAQ 54 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555554444444444433
No 318
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=35.16 E-value=73 Score=26.20 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=22.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 196 IDNVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 196 ~elleq~qaMEknL~~marEvekLrAEIanae 227 (312)
.++.+.++.+..++..+.+++++|+.+++..+
T Consensus 28 ~~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~~ 59 (171)
T 2zvf_A 28 AKLPKTVERFFEEWKDQRKEIERLKSVIADLW 59 (171)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777777777777777777777654
No 319
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=35.06 E-value=50 Score=28.94 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHhccCCCCCcccc
Q 021465 216 MEKLHAEVVNAEMRGHAPNPYSRTY 240 (312)
Q Consensus 216 vekLrAEIanaekra~a~~~y~~~~ 240 (312)
++.+++.|...-...+.. ||...|
T Consensus 166 ~ee~~~kl~~~leeL~~~-p~~~e~ 189 (216)
T 2lem_A 166 SEQMRESLAQRLAELKSN-PTLNEY 189 (216)
T ss_dssp HHHHHHHHHHHHHHHHHC-CCCCCC
T ss_pred HHHHHHHHHHHHHHHhCC-cchHHH
Confidence 444555544332222212 555555
No 320
>2bsg_A Fibritin; viral protein, attachment protein, bacteriophage assembly, chaperone, coiled coil, structural protein; 15.00A {Bacteriophage T4}
Probab=34.90 E-value=3.6e+02 Score=26.99 Aligned_cols=97 Identities=10% Similarity=0.164 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch--------hHHHHHHHHHHHHHH----------------
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLP--------DLHAELDSLRQEHRR---------------- 183 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~--------alraELe~LrqElq~---------------- 183 (312)
.+.+-++++..|...-.++...+..+..++.....|+-... .++.+|.-+|+|+=.
T Consensus 95 qI~~n~~dI~~Lk~~~~~~~~~l~~~~~~~~ei~~diG~~~~~~d~~~rTV~~DI~~IK~elG~Y~g~DING~p~pgs~~ 174 (487)
T 2bsg_A 95 QIGINKKDISDLKTLTSEHTEILNGTNNTVDSILADIGPFNAEANSVYRTIRNDLLWIKRELGQYTGQDINGLPVVGNPS 174 (487)
T ss_pred HHHhhHHHHHHHhcchhhhhhhhhhhccchHHHHhhcCccCcccCCCccccchhHHHHHHHhccCCCCCCCCCcCCCCCC
Confidence 45555566666655555555566666666666555544422 345666666655533
Q ss_pred --HHHHHHHHHhhcHHhHHHHHHHHHH-----HHHHHHHHHHHHHHHH
Q 021465 184 --LRATFEYEKGLNIDNVEQLQAMEKN-----LVGMAREMEKLHAEVV 224 (312)
Q Consensus 184 --~RaaiE~EKk~~~elleq~qaMEkn-----L~~marEvekLrAEIa 224 (312)
++-+|+.=...-..+-..+.++|++ .-.+..++.+||+||=
T Consensus 175 tGmK~rV~~Nt~~i~~~~~RIt~LE~~~~dSDVG~Lt~ev~~LR~ElG 222 (487)
T 2bsg_A 175 SGMKHRIINNTDVITSQGIRLSELETKFIESDVGSLTIEVGNLREELG 222 (487)
T ss_pred cceehhhhhhHHHHHhcccHHHHHHHhcccCCchHHHHHHHHHHHHhC
Confidence 2222222222222222333566655 5578889999999985
No 321
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=34.67 E-value=2.5e+02 Score=25.02 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHhHHHHHH
Q 021465 75 TMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 75 ~L~qeL~aaq~Elq~L~~~ 93 (312)
.|+........++..+...
T Consensus 85 tl~~aw~~i~~e~e~~a~~ 103 (312)
T 3abh_A 85 TVEKAWMAFMSEAERVSEL 103 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4444455555555554443
No 322
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=34.29 E-value=56 Score=27.24 Aligned_cols=16 Identities=19% Similarity=0.109 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRAT 187 (312)
Q Consensus 172 aELe~LrqElq~~Raa 187 (312)
-..+.|..++.--|..
T Consensus 62 lQ~esmeaalkmEr~~ 77 (130)
T 3cl3_D 62 MQGQSVEAALRMERQA 77 (130)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 323
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}
Probab=34.03 E-value=2.8e+02 Score=28.28 Aligned_cols=31 Identities=35% Similarity=0.372 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 132 AHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 132 ~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
++..++.|...|++|+.+++..-..+...+.
T Consensus 88 lq~~~~~L~~~R~~l~~~~~~~l~~~~~lq~ 118 (585)
T 1y1u_A 88 LQREAQTLQQYRVELAEKHQKTLQLLRKQQT 118 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777788887777777776666554
No 324
>2pih_A Protein YMCA; regulate community development, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.281.1.1
Probab=33.92 E-value=2e+02 Score=23.73 Aligned_cols=31 Identities=13% Similarity=0.326 Sum_probs=13.0
Q ss_pred HHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHH
Q 021465 108 LLDKIAKMEADCKAGERLKKDLQQAHIEAQSL 139 (312)
Q Consensus 108 L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L 139 (312)
..++..++..++..++.++ ++.++..+++.|
T Consensus 71 ~~~el~~l~~~l~~np~V~-~y~~Ae~~l~~L 101 (151)
T 2pih_A 71 VEAKIDALQEELEEIPVIQ-EFRDSQMEVNDL 101 (151)
T ss_dssp HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHHHH-HHHHHHHHHHHH
Confidence 3334444444444444444 444444444443
No 325
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=33.78 E-value=39 Score=25.91 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchhhH
Q 021465 63 ARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTESDS 103 (312)
Q Consensus 63 ~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~e~ 103 (312)
+.+|..|......++.+++.+++|...|......++.=.++
T Consensus 33 L~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~~laev 73 (79)
T 2zxx_A 33 LKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYMAEV 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 326
>1fzc_A Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: h.1.8.1 PDB: 1fzb_A* 1fza_A* 1fze_A* 1fzf_A* 1fzg_A* 1n86_A* 2h43_A* 2hlo_A* 2hod_A* 2hpc_A* 2q9i_A* 2xnx_A 2xny_A 2z4e_A* 3e1i_A* 1n8e_A 2oyh_A* 1ltj_A* 1lt9_A* 1re4_A* ...
Probab=33.60 E-value=33 Score=26.69 Aligned_cols=42 Identities=26% Similarity=0.413 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 183 RLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 183 ~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
.+|..|++-|..-.+++.++..+.+|....--++..|+-+|-
T Consensus 4 dLrrrI~~LkrkV~~q~~~i~~Lq~nvr~Q~vemkRLEVDID 45 (87)
T 1fzc_A 4 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDID 45 (87)
T ss_dssp -----CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 467788888888899999999999999999999999988876
No 327
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding, SH2 domain, transcription REGU signaling protein; 3.21A {Mus musculus}
Probab=32.75 E-value=84 Score=32.15 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQAS 154 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~ 154 (312)
++.|+...+....|++.|...-.++.=+++.+.
T Consensus 21 v~~l~~~~q~~e~~~k~Le~~Qe~F~~~y~~~~ 53 (585)
T 1y1u_A 21 FEELRLITQDTENELKKLQQTQEYFIIQYQESL 53 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 345566666666777777666666665555443
No 328
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=32.67 E-value=18 Score=23.77 Aligned_cols=21 Identities=19% Similarity=0.203 Sum_probs=12.5
Q ss_pred HHHHHHHHhhhhhHhhhhhHH
Q 021465 104 HIRVLLDKIAKMEADCKAGER 124 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~ 124 (312)
++..|..++....++||+.|+
T Consensus 11 elqaleargtdsnaelramea 31 (40)
T 1abz_A 11 ELQALEARGTDSNAELRAMEA 31 (40)
T ss_dssp HHHHHHHTCSSCSSHHHHHHH
T ss_pred HHHHHHHcCCCchHHHHHHHH
Confidence 444455566666667776654
No 329
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=31.71 E-value=2.3e+02 Score=23.77 Aligned_cols=108 Identities=17% Similarity=0.263 Sum_probs=0.0
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh---------hHHHHHHHHHhhhhhHhhhhhHHHHH
Q 021465 57 AEIERLARDNHRLAASHITMREDLAAAQQEIPRIKAHIRNIHTES---------DSHIRVLLDKIAKMEADCKAGERLKK 127 (312)
Q Consensus 57 ~Ei~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~---------e~qiR~L~ek~~k~Eaelra~e~lk~ 127 (312)
.|+=+++.+=+-=+.+=.+.||.|+.+=-|++-.. .+.+|+-.. +.-..-|.+-...|++++.....|-.
T Consensus 25 ~elik~L~~le~sassDa~vrq~Ia~LP~eVsd~s-~l~klkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~ 103 (152)
T 4fla_A 25 EELIKALQDLENAASGDATVRQKIASLPQEVQDVS-LLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLAR 103 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGTCGG-GGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccchHHHHHHHHcCCccccCHH-HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVK 165 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~q 165 (312)
-|.....-.+...+.-+....+++.--..+...+.+++
T Consensus 104 ~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~ 141 (152)
T 4fla_A 104 MLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELK 141 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 330
>3pwx_A Putative flagellar HOOK-associated protein; structural genomics, structural protein, PSI-2, protein STRU initiative; 2.50A {Vibrio parahaemolyticus}
Probab=31.70 E-value=2.7e+02 Score=24.54 Aligned_cols=44 Identities=7% Similarity=0.167 Sum_probs=20.2
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASE 155 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~ 155 (312)
+.+|.++++.++....-+.....-++.-...-.++..-++.++.
T Consensus 13 ~~~l~~~i~~l~q~~~N~~~a~s~l~~ae~aL~~i~~~l~r~re 56 (239)
T 3pwx_A 13 LLNLERENSAIAQYQSNIANLKTTLSSQETHLDSVSESLKSMRD 56 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555544444444444443344433443333
No 331
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=31.47 E-value=1.3e+02 Score=27.24 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 125 LKKDLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 125 lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
+|.++.++...+++....++.+.+++..-++.++.
T Consensus 176 lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~ 210 (228)
T 3q0x_A 176 VKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQ 210 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555444444444444444444333
No 332
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=31.15 E-value=1.5e+02 Score=25.34 Aligned_cols=46 Identities=26% Similarity=0.245 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHH
Q 021465 172 AELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEK 218 (312)
Q Consensus 172 aELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvek 218 (312)
.|++.|+.|-.+.+.+|+..++.-++++.|--++ |||+.=.++.+.
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vaf-knLv~RN~~~e~ 50 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAF-KNLVQRNRHAEQ 50 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
No 333
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=30.31 E-value=1.2e+02 Score=21.82 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=29.4
Q ss_pred HHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 188 FEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 188 iE~EKk~~~elleq~qaMEknL~~marEvekLrAEIa 224 (312)
+..-|.-|..+..+++.+|..-..+.+|++.|++-+.
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLk 49 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLR 49 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566677888888889999999999999988765
No 334
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=30.19 E-value=3.4e+02 Score=25.28 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=23.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh
Q 021465 68 RLAASHITMREDLAAAQQEIPRIKAHIRNIHTES 101 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~ 101 (312)
.|-..|.+++.+|.+.+..++.+......+....
T Consensus 169 ~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~ 202 (476)
T 1hci_A 169 ALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD 202 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCc
Confidence 3445677778888887777877777766666554
No 335
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=30.18 E-value=1.4e+02 Score=20.93 Aligned_cols=43 Identities=14% Similarity=0.311 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 177 LRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHA 221 (312)
Q Consensus 177 LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrA 221 (312)
|.+.+.-.++-|+.-|+ .-.++++..++.||-++..|++.++.
T Consensus 7 L~EQ~~~I~~~I~qAk~--~~r~DEV~~Le~NLrEL~~ei~~~~~ 49 (51)
T 1yzm_A 7 LLQQIHNITSFIRQAKA--AGRMDEVRTLQENLRQLQDEYDQQQT 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444444433332 23567788889999999988888763
No 336
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=30.13 E-value=53 Score=27.08 Aligned_cols=8 Identities=13% Similarity=0.464 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 021465 126 KKDLQQAH 133 (312)
Q Consensus 126 k~EL~q~r 133 (312)
|+||+++.
T Consensus 9 K~Eiq~L~ 16 (123)
T 2lf0_A 9 KNEIKRLS 16 (123)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444433
No 337
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=30.08 E-value=1.2e+02 Score=21.73 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=24.0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 66 NHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 66 NqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
-..|.++--+|+.++..+++|..+|...
T Consensus 5 EKSlVDtVYaLkDqV~eL~qe~k~m~k~ 32 (56)
T 2w6b_A 5 SKSLVDTVYALKDEVQELRQDNKKMKKS 32 (56)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568888999999999999999999763
No 338
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=29.95 E-value=1.2e+02 Score=19.93 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 130 QQAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 130 ~q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
.|+..++..|.....+|-.+|..|+..|.
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 35666666666666666666666665554
No 339
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=29.84 E-value=2.1e+02 Score=22.61 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHH
Q 021465 168 PDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNL 209 (312)
Q Consensus 168 ~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL 209 (312)
..|...|+..++++..++..++.-++.-.+...+.+++++=.
T Consensus 77 ~~L~~~I~~q~~~l~~~~~~~e~~r~~l~~a~~~~k~~e~L~ 118 (150)
T 3ajw_A 77 QTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLQAWQTLQ 118 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555555554444444444445554433
No 340
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=29.30 E-value=4.6e+02 Score=26.52 Aligned_cols=91 Identities=10% Similarity=0.089 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 147 TSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 147 ~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIana 226 (312)
+.+-|...+..+++.-+..-++..+.+++..|+||..+-..++.-..-...-..=.+.....|++....+..+.+++.+.
T Consensus 296 lkqrqeee~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~~f 375 (551)
T 2b5u_A 296 VKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQF 375 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhhhh
Q ss_pred HHhccCCCCCc
Q 021465 227 EMRGHAPNPYS 237 (312)
Q Consensus 227 ekra~a~~~y~ 237 (312)
..-++.+-.||
T Consensus 376 ~~~n~~p~~~G 386 (551)
T 2b5u_A 376 NRFAHDPMAGG 386 (551)
T ss_dssp GGGTTCTTSTH
T ss_pred hhhccChhhcc
No 341
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=28.91 E-value=2.6e+02 Score=25.96 Aligned_cols=135 Identities=13% Similarity=0.174 Sum_probs=0.0
Q ss_pred Hh-HHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 86 EI-PRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEV 164 (312)
Q Consensus 86 El-q~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~ 164 (312)
+| +-+...+.++..+-..++..|-.++.=+=.++. ..+.++...++..+++ .-.++-.++.-...+|...-.
T Consensus 63 ~l~kel~~l~~~~~~el~~y~~~l~~qL~P~~~e~~--~~l~~~~~~Lr~~L~~---dlEelR~~L~Py~~el~~~l~-- 135 (307)
T 2l7b_A 63 QVTQELRALMDETMKELKAYKSELEEQLTPVAEETR--ARLSKELQAAQARLGA---DMEDVCGRLVQYRGEVQAMLG-- 135 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCSSTH--HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH--HHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH--
Q ss_pred ccchhHHHHHHHHHHHH-HHHHHHHHHHHhhcHHhHHHH-HHHHHHHHHHHHHH----HHHHHHHHHHH
Q 021465 165 KNLPDLHAELDSLRQEH-RRLRATFEYEKGLNIDNVEQL-QAMEKNLVGMAREM----EKLHAEVVNAE 227 (312)
Q Consensus 165 qql~alraELe~LrqEl-q~~RaaiE~EKk~~~elleq~-qaMEknL~~marEv----ekLrAEIanae 227 (312)
+.++.++..|..+-.|+ .+.+..+|.-+..-.-..+.+ ..+..|+.++..-+ +.+++.+.+.+
T Consensus 136 ~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~py~eeLr~kl~~~veelr~~L~Py~e~~~~~~~~v~ 204 (307)
T 2l7b_A 136 QSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLGPLVEQGRVRAATVG 204 (307)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHCSSSCTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhh
No 342
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=28.81 E-value=92 Score=20.53 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=15.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQEL 146 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL 146 (312)
|.+++.|..++++-..++-+|.....+|
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL 33 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKEL 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4455666666666666665555444443
No 343
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=28.65 E-value=1.4e+02 Score=20.44 Aligned_cols=24 Identities=8% Similarity=0.272 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 203 QAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 203 qaMEknL~~marEvekLrAEIana 226 (312)
+....++..+...+++++.+|...
T Consensus 29 ~~~k~~~~~~~~~l~~~~~~I~~~ 52 (60)
T 3htk_A 29 LKAKEKINEIFEKLNTIRDEVIKK 52 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433
No 344
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=28.64 E-value=1.8e+02 Score=21.69 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 131 QAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 131 q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
+++.++++|...=.--+-++..+++-|++
T Consensus 39 ~~~~Elk~~~e~Ld~KI~eL~elrq~Lak 67 (72)
T 3cve_A 39 AFRSNLKTLLEILDGKIFELTELRDNLAK 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444
No 345
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=28.58 E-value=1.9e+02 Score=21.93 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQS 138 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~ 138 (312)
-|..+.+++-|+|....-.+.|.....+-+..+.+
T Consensus 24 NI~kvL~RgekL~~L~~kt~~L~~~s~~F~~~A~~ 58 (91)
T 3hd7_A 24 NVDKVLERDQKLSELDDRADALQAGASQFETSAAK 58 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667777777776555555555554444444444
No 346
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=28.46 E-value=3.7e+02 Score=25.14 Aligned_cols=20 Identities=5% Similarity=0.039 Sum_probs=10.9
Q ss_pred hcccchhHHHHHHHHHHHHH
Q 021465 163 EVKNLPDLHAELDSLRQEHR 182 (312)
Q Consensus 163 d~qql~alraELe~LrqElq 182 (312)
+...|+.|+.+|+.++.++.
T Consensus 174 ~~~~I~~Lq~eI~~l~~~I~ 193 (346)
T 2nrj_A 174 QGADVDADQKRLEEVLGSVN 193 (346)
T ss_dssp TTCCHHHHHHHHHHHTGGGC
T ss_pred ccccHHHHHHHHHHHHHHHH
Confidence 33455666666665554443
No 347
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=28.20 E-value=1.4e+02 Score=21.77 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
+=++|.|+..++.|.+++. .-+++.+..+++|++
T Consensus 9 VYalkDev~eLk~e~k~~k----~~le~eqraRk~LE~ 42 (61)
T 3l4f_A 9 VYALKDEVQELRQDNKKMK----KSLEEEQRARKDLEK 42 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 3456777777777776632 334445555555554
No 348
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=28.09 E-value=3e+02 Score=23.99 Aligned_cols=20 Identities=10% Similarity=0.328 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021465 205 MEKNLVGMAREMEKLHAEVV 224 (312)
Q Consensus 205 MEknL~~marEvekLrAEIa 224 (312)
+...+..+....+.|..-+.
T Consensus 292 i~~~~~~l~~rw~~l~~~~~ 311 (322)
T 1u4q_A 292 ITAKMKGLKGKVSDLEKAAA 311 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444333
No 349
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=28.02 E-value=1.3e+02 Score=19.75 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 131 QAHIEAQSLARARQELTSKIQQASEALH 158 (312)
Q Consensus 131 q~r~e~q~L~~~rqeL~aevq~l~~EL~ 158 (312)
|+...+..|.....+|-.+|..|+.-|.
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 5555566666666666666655555443
No 350
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=27.86 E-value=1.1e+02 Score=21.31 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=22.0
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
|.+|-.-|.+|+.-...|+..-.-..+||.||+..
T Consensus 6 l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~L 40 (48)
T 3vmx_A 6 ILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKL 40 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 45556666666666666666666666666666653
No 351
>2xcs_B DNA gyrase subunit B, DNA gyrase subunit A; isomerase, type IIA topoisomerase; HET: DNA 5UA RXV; 2.10A {Staphylococcus aureus} PDB: 2xct_B* 2xcr_B* 2xcq_A* 2xco_A*
Probab=27.85 E-value=1.5e+02 Score=30.96 Aligned_cols=21 Identities=19% Similarity=0.118 Sum_probs=9.0
Q ss_pred HHHHHHHHhhhhhHhhhhhHH
Q 021465 104 HIRVLLDKIAKMEADCKAGER 124 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~ 124 (312)
.++.+.++...+|..+.+.+.
T Consensus 571 ~L~k~~~r~hilegl~~a~~~ 591 (692)
T 2xcs_B 571 NLRKAKDRAHILEGLRIALDH 591 (692)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHHh
Confidence 334444444444444444433
No 352
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=27.72 E-value=1.7e+02 Score=25.21 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=22.5
Q ss_pred chhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021465 99 TESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARAR 143 (312)
Q Consensus 99 ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~r 143 (312)
.+.....|+++|...++- ..++.++.-+..+.....++.+.+
T Consensus 206 ~~~~~~~rdv~d~~~~~~---e~i~~~re~~~~l~d~~~s~~s~~ 247 (252)
T 3ck6_A 206 TSRPHQYRFAHNNITRIN---ETIEFYLGEVALFQDEIKHNRDEK 247 (252)
T ss_dssp HTSHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456666666665543 333455555555555555555444
No 353
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=27.67 E-value=2e+02 Score=22.20 Aligned_cols=14 Identities=29% Similarity=0.548 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHRRLRA 186 (312)
Q Consensus 173 ELe~LrqElq~~Ra 186 (312)
+|+.+..+|.+.+.
T Consensus 59 ei~~le~~i~rhk~ 72 (84)
T 1gmj_A 59 EIERLQKEIERHKQ 72 (84)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333334433333
No 354
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=27.60 E-value=3.2e+02 Score=24.10 Aligned_cols=154 Identities=15% Similarity=0.186 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhH-HHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 68 RLAASHITMREDLAAAQQEIP-RIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQEL 146 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~Elq-~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL 146 (312)
.|......|+..|.---+|++ +|......+++.-...|.++-.+..-.=.+++ +.+.++++++|..+.-+...=
T Consensus 52 ~l~~~~~~l~~~l~p~~ee~~~~l~~~~~~lr~~l~kd~ee~r~~l~Py~~el~--~~~~~~~eelr~~L~P~~eel--- 126 (243)
T 2a01_A 52 SVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQ--KKWQEEMELYRQKVEPLRAEL--- 126 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSCSSTTHHHHHHHHH--HHHHHHHHHHHTTHHHHHHHH---
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHH---
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHH-HHHHHHHHHHHHHHHHHHhhcHHhHHHH-HHHHHHHH--------HHHHHH
Q 021465 147 TSKIQQASEALHKARLEVKNLPDLHAEL-DSLRQEHRRLRATFEYEKGLNIDNVEQL-QAMEKNLV--------GMAREM 216 (312)
Q Consensus 147 ~aevq~l~~EL~r~kad~qql~alraEL-e~LrqElq~~RaaiE~EKk~~~elleq~-qaMEknL~--------~marEv 216 (312)
...++..++..+. +|.-.-.++ +.+.+-++.+|+.+.---......+++. +.+...+. .+...+
T Consensus 127 ---~~~~~~~~eel~~---~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~ 200 (243)
T 2a01_A 127 ---QEGARQKLHELQE---KLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHL 200 (243)
T ss_dssp ---HHHHHHHHHHHCC---SCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHH
T ss_pred ---HHHHHhhHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhccC
Q 021465 217 EKLHAEVVNAEMRGHA 232 (312)
Q Consensus 217 ekLrAEIanaekra~a 232 (312)
+.|+..|.-.-...+.
T Consensus 201 e~lr~~l~p~~e~lk~ 216 (243)
T 2a01_A 201 STLSEKAKPALEDLRQ 216 (243)
T ss_dssp HHHHHHHHHHHHHSSS
T ss_pred HHHHHHhHHHHHHHHH
No 355
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=27.58 E-value=73 Score=21.66 Aligned_cols=23 Identities=13% Similarity=0.330 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 021465 207 KNLVGMAREMEKLHAEVVNAEMR 229 (312)
Q Consensus 207 knL~~marEvekLrAEIanaekr 229 (312)
++++...+|++|.+..|....++
T Consensus 9 qkI~kVdrEI~Kte~kI~~lqkK 31 (42)
T 2l5g_B 9 QNMDRVDREITMVEQQISKLKKK 31 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777777777766654
No 356
>2l6f_A Focal adhesion kinase 1, linker1, paxillin, linke paxillin; FAT, FAK, LD2, LD4, fusion protein, chimera protei transferase,cell adhesion; NMR {Gallus gallus} PDB: 2l6g_A 2l6h_A
Probab=33.61 E-value=13 Score=33.54 Aligned_cols=27 Identities=30% Similarity=0.467 Sum_probs=15.0
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCcc
Q 021465 277 MIPYGSGNGVAAASGVGMPAVPASTVG 303 (312)
Q Consensus 277 ~~p~~~~~~~~~~~~~~~~~~~~~~~~ 303 (312)
-+|++++.|-.-.+|.|+.+.+.+.||
T Consensus 173 ~~psg~~~~~~~~~~~~~~~~~~~~~~ 199 (215)
T 2l6f_A 173 NPPSGSGSGSGGSGGSGGSGGSGGSGG 199 (215)
Confidence 466666666555555555555544443
No 357
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=27.46 E-value=2.2e+02 Score=22.11 Aligned_cols=72 Identities=13% Similarity=0.245 Sum_probs=42.3
Q ss_pred HHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Q 021465 110 DKIAKMEADCKAGERLKKDLQQAHIEAQSLARA----RQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLR 185 (312)
Q Consensus 110 ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~----rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~R 185 (312)
+.+.++|..| ..+|+.++++..-+..+..- =|+|..=++.+-+-+-.+-+ ++..+.++++.++.+.-..|
T Consensus 12 ~lv~~fe~rL---~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLAa---~l~~lH~~V~~~Ke~Yl~~r 85 (93)
T 3t98_B 12 VLVQQFEVQL---QQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAA---QLQSIHENVKVLKEQYLSYR 85 (93)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 3444455433 34566666666665554421 14565556666655555555 66777777777777777776
Q ss_pred HH
Q 021465 186 AT 187 (312)
Q Consensus 186 aa 187 (312)
..
T Consensus 86 r~ 87 (93)
T 3t98_B 86 KM 87 (93)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 358
>3k8w_A Flagellin homolog; flagellum, structural protein, bacterial flagellu; 1.70A {Sphingomonas SP} PDB: 2zbi_A 3k8v_A
Probab=27.44 E-value=3.9e+02 Score=25.29 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=12.7
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQS 138 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~ 138 (312)
+.+|.++++.++.+++-+.....-++.
T Consensus 31 a~~L~sqi~~l~Q~~rN~~da~S~Lqt 57 (326)
T 3k8w_A 31 SDRMTAQIKGLTQAQRNANDGISLAQT 57 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555444444444443
No 359
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=27.30 E-value=2.3e+02 Score=22.36 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Q 021465 150 IQQASEALHKARLEVKNLPDLHAELDSLRQEH 181 (312)
Q Consensus 150 vq~l~~EL~r~kad~qql~alraELe~LrqEl 181 (312)
+...+-...|.+. ++..++.-|+.||+|+
T Consensus 66 LAeAka~~~Ka~~---~~~el~~~I~~LrqEl 94 (98)
T 4fm3_A 66 LAESKVLTQKSKD---QLGELDKSLKRLRKQL 94 (98)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 4444444445553 5566666677777765
No 360
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=27.19 E-value=3.5e+02 Score=24.49 Aligned_cols=125 Identities=14% Similarity=0.151 Sum_probs=73.7
Q ss_pred HHHHHhhhhhHhhhhhH-HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cc------
Q 021465 107 VLLDKIAKMEADCKAGE-RLKKDLQ-----QAHIEAQSLARARQELTSKIQQASEALHKARLEVK-------NL------ 167 (312)
Q Consensus 107 ~L~ek~~k~Eaelra~e-~lk~EL~-----q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~q-------ql------ 167 (312)
.+.+.-.++|+.++.+- .+-.+|. .+..+.+.+...+++-..++...+.+|.+...+.. ..
T Consensus 84 ~i~~~hr~ie~~l~~~~k~~~~eli~pLe~k~e~d~k~~~~~~K~~~~~~k~~r~elkk~~~~~~k~qkK~rk~~~~gk~ 163 (253)
T 2d1l_A 84 RMCMRHRSIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKVDAQGRG 163 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhccccccCCC
Confidence 34455555555554322 2222222 22456666666666666666666666644443321 10
Q ss_pred ---hhHHH---HHHHHHH-----HHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 021465 168 ---PDLHA---ELDSLRQ-----EHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEMRGH 231 (312)
Q Consensus 168 ---~alra---ELe~Lrq-----Elq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanaekra~ 231 (312)
+.+.. ++...+. +-+.+|.++-.|+.-+--+++.+...-+.-.+|..++..|+.-|.++..-..
T Consensus 164 ~~~~~l~~a~q~v~~~~~~le~~~~~~~r~AL~EERrRycflv~~l~pv~~~e~~~~~e~~~l~~~l~~~~~~~~ 238 (253)
T 2d1l_A 164 DIQPQLDSALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVIEEEISMLGEITHLQTISEDLKSLTM 238 (253)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGHHHHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence 11112 2222222 3355677777899999999999988888888888899999998888775443
No 361
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=27.13 E-value=82 Score=28.59 Aligned_cols=23 Identities=13% Similarity=0.149 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 205 MEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 205 MEknL~~marEvekLrAEIanae 227 (312)
.+.++.....+++.++++|..++
T Consensus 134 a~~~~~~a~a~l~~a~~~l~~~~ 156 (359)
T 3lnn_A 134 AQSDYDQAASESQRADARLAQLG 156 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444445555555555443
No 362
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=26.97 E-value=1.3e+02 Score=27.05 Aligned_cols=9 Identities=33% Similarity=0.564 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q 021465 153 ASEALHKAR 161 (312)
Q Consensus 153 l~~EL~r~k 161 (312)
+.+.|++.+
T Consensus 183 l~~~L~~~~ 191 (228)
T 3q0x_A 183 LSDDLSRTR 191 (228)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 363
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=26.66 E-value=2.7e+02 Score=22.89 Aligned_cols=117 Identities=12% Similarity=0.128 Sum_probs=55.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHhHHHHHHhhhhhchh----hHHHHHHHHHhhhhhHhh-hhhHHHHHHHHHHHHHHHHHHH
Q 021465 67 HRLAASHITMREDLAAAQQEIPRIKAHIRNIHTES----DSHIRVLLDKIAKMEADC-KAGERLKKDLQQAHIEAQSLAR 141 (312)
Q Consensus 67 qrLa~th~~L~qeL~aaq~Elq~L~~~~~~~~ae~----e~qiR~L~ek~~k~Eael-ra~e~lk~EL~q~r~e~q~L~~ 141 (312)
+.|-..|..++.+|.+-+..+..+......+-... -..|+...+.....-..| ...+.-+..|++.. +++.|..
T Consensus 36 ~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l-~l~~F~~ 114 (214)
T 1s35_A 36 EQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCL-GFQEFQK 114 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 44555677888888877777777776666554431 123444444443333333 22233344444332 2444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Q 021465 142 ARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 142 ~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE 189 (312)
.-.++..=+......|. ...+...-.+++.+.++++.....++
T Consensus 115 ~~~~~~~Wl~~~E~~l~-----~~~~g~~~~~v~~llkkh~~f~~~l~ 157 (214)
T 1s35_A 115 DAKQAEAILSNQEYTLA-----HLEPPDSLEAAEAGIRKFEDFLGSME 157 (214)
T ss_dssp HHHHHHHHHHHHHHHHH-----CCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-----cccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44444333332222221 12333334555555555555544443
No 364
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=26.42 E-value=2.5e+02 Score=22.45 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=11.6
Q ss_pred HHHHHHhhhhhHhhhhhHHHHHHHHHH
Q 021465 106 RVLLDKIAKMEADCKAGERLKKDLQQA 132 (312)
Q Consensus 106 R~L~ek~~k~Eaelra~e~lk~EL~q~ 132 (312)
|++.+|...+|..-+....|+.++..+
T Consensus 51 Re~~eK~re~e~~Kr~~~~L~~~~~~l 77 (103)
T 4h22_A 51 RQYEEKNKEFEREKHAHSILQFQFAEV 77 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444433
No 365
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=26.24 E-value=68 Score=19.97 Aligned_cols=19 Identities=32% Similarity=0.443 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLAR 141 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~ 141 (312)
+++|.||-|.++.+.+|..
T Consensus 2 Q~IkkELtQIK~kvDsLLe 20 (28)
T 1txp_A 2 QAIKKELTQIKQKVDSLLE 20 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4677788888877777643
No 366
>2oee_A UPF0342 protein YHEA; MCSG, structural genomics, PSI-2, protein structure in midwest center for structural genomics, unknown function; HET: MSE; 1.96A {Bacillus subtilis} SCOP: a.281.1.2
Probab=26.12 E-value=2.3e+02 Score=21.87 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=27.8
Q ss_pred HHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 107 VLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKA 160 (312)
Q Consensus 107 ~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ 160 (312)
.++|+...|...|+..+.++ .+..++..++. ...-+.|+.+.+.++.++...
T Consensus 4 ~I~d~A~eL~~~I~~s~ey~-~~~~a~~~i~~-d~ea~~l~~~f~~~q~~~~~~ 55 (117)
T 2oee_A 4 NFYDVAYDLENALRGSEEFT-RLKNLYDEVNA-DESAKRMFENFRDVQLRLQQK 55 (117)
T ss_dssp CHHHHHHHHHHHHHTSHHHH-HHHHHHHHHHH-SHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777777777777 56666555543 222234444455555554443
No 367
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=26.05 E-value=76 Score=25.94 Aligned_cols=34 Identities=15% Similarity=0.184 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHH
Q 021465 169 DLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQL 202 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~EKk~~~elleq~ 202 (312)
.|..+|..++.+|+.++.++.++.+...+.++.+
T Consensus 11 ~L~~~i~~l~~~L~~lkqa~k~~~~~~~~eL~~L 44 (122)
T 3viq_A 11 KLEKEVRNLQEQLITAETARKVEAKNEDKDLQTL 44 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4556677777888888888888888876666655
No 368
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=25.93 E-value=2.1e+02 Score=21.41 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 133 HIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 133 r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
+.++..|.....+|..+++.+.+++.+.+.
T Consensus 3 ~k~v~~l~~E~eel~~klk~~~ee~~~~~e 32 (71)
T 1uix_A 3 TSDVANLANEKEELNNKLKEAQEQLSRLKD 32 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777777777654
No 369
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=25.88 E-value=2e+02 Score=23.90 Aligned_cols=68 Identities=21% Similarity=0.314 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021465 128 DLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNL-PDLHAELDSLRQEHRRLRATFEYEKGLN 195 (312)
Q Consensus 128 EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql-~alraELe~LrqElq~~RaaiE~EKk~~ 195 (312)
||.+.+..+..-...++.|-.+...+.+.+....+++-.+ -.....++.|+=+.+..+++|..|+...
T Consensus 10 ELqEsqskL~~Ae~~k~~Leek~~~~e~~~~~~~~Elee~kqq~~~~~d~L~lQ~esmeaalkmEr~~~ 78 (130)
T 3cl3_D 10 ELQESQSRLEAATKECQALEGRARAASEQARQLESEREALQQQHSVQVDQLRMQGQSVEAALRMERQAA 78 (130)
T ss_dssp -----------------------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444455555555544444322110 1134567777777777777777666554
No 370
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=25.72 E-value=5.7e+02 Score=26.38 Aligned_cols=27 Identities=37% Similarity=0.580 Sum_probs=15.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 166 NLPDLHAELDSLRQEHRRLRATFEYEK 192 (312)
Q Consensus 166 ql~alraELe~LrqElq~~RaaiE~EK 192 (312)
.+..++.|+..+++++..+++..+.|+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (854)
T 1qvr_A 431 RLKAIEAEIAKLTEEIAKLRAEWERER 457 (854)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666666555555443
No 371
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=25.67 E-value=2.1e+02 Score=22.11 Aligned_cols=23 Identities=13% Similarity=0.323 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 021465 139 LARARQELTSKIQQASEALHKAR 161 (312)
Q Consensus 139 L~~~rqeL~aevq~l~~EL~r~k 161 (312)
|...|..|..++..-.++|.+.+
T Consensus 42 L~~LKkkl~~el~~h~~ei~~le 64 (84)
T 1gmj_A 42 LAALKKHKENEISHHAKEIERLQ 64 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444
No 372
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=25.63 E-value=1.7e+02 Score=20.30 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHH
Q 021465 179 QEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKL 219 (312)
Q Consensus 179 qElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekL 219 (312)
+.+--.++-|+.-++ +-.++++.+++.||.++.+|++.+
T Consensus 8 EQ~~~I~~~I~qAk~--~rRfdEV~~L~~NL~EL~~E~~~~ 46 (48)
T 3v1a_A 8 QQIKNIHSFIHQAKA--AGRMDEVRTLQENLHQLMHEYFQQ 46 (48)
T ss_dssp HHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHHHHhh
Confidence 333344444433333 235677888888988888887753
No 373
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=25.55 E-value=15 Score=36.03 Aligned_cols=52 Identities=15% Similarity=0.264 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhhhhhHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 102 DSHIRVLLDKIAKMEADCKAGERLKKDLQ-QAHIEAQSLARARQELTSKIQQASEALHK 159 (312)
Q Consensus 102 e~qiR~L~ek~~k~Eaelra~e~lk~EL~-q~r~e~q~L~~~rqeL~aevq~l~~EL~r 159 (312)
+...+++..+..++|++++ +... +++..-++|....++|.++...+++.+..
T Consensus 325 ~~~~~~~~~~~~~~e~~~~------~~f~~~v~~~e~~l~~~e~~l~~~~~~~~~~~~~ 377 (427)
T 2qag_B 325 EAKRNEFLGELQKKEEEMR------QMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQD 377 (427)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566667777775443 3322 44555555555556666666666655443
No 374
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=25.29 E-value=1.5e+02 Score=24.77 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhcHHhHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 179 QEHRRLRATFEYEKGLNIDNVE----------QLQAMEKNLVGMAREMEKLHAEVVNAEMRG 230 (312)
Q Consensus 179 qElq~~RaaiE~EKk~~~elle----------q~qaMEknL~~marEvekLrAEIanaekra 230 (312)
+++..+|..+|.-+|.+...+. +++..+..+.+...-+.++.+++.....|+
T Consensus 59 kql~~Ake~~eKlkKKrsSv~gs~~~aHs~~sslD~vD~~Il~Ak~aL~evt~~l~Er~~RW 120 (136)
T 3ter_A 59 KEMKEAIEMVDRLQKKQGSVLSSLKLATGAASTSDQVDSKIFALKSRMEKIHTLTRETQERW 120 (136)
T ss_dssp HHHHHHHHHHHHHHHC------CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhchheeeeeecCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777778877777666553 346677777777777777777777655554
No 375
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=24.70 E-value=2.4e+02 Score=21.75 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 173 ELDSLRQEHRRLRAT-FEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAE 222 (312)
Q Consensus 173 ELe~LrqElq~~Raa-iE~EKk~~~elleq~qaMEknL~~marEvekLrAE 222 (312)
=+..|++||+.++.. --.|...+..+|+| -..+|.++.+.+.-+..|
T Consensus 37 ~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~q---AraDL~~l~r~~av~g~E 84 (90)
T 4b6x_A 37 MVNNLTDELQDAIDEANPAEIANTSQQLRH---ARADLADLQRRFAVLRNE 84 (90)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHhHHHHHHH---HHHHHHHHHHHHHHHhhh
Confidence 345556666655543 12233333333333 344555555555444433
No 376
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=24.69 E-value=2.8e+02 Score=22.54 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=5.7
Q ss_pred HHHHHHHHHhHHH
Q 021465 78 EDLAAAQQEIPRI 90 (312)
Q Consensus 78 qeL~aaq~Elq~L 90 (312)
..|..+..|+++|
T Consensus 9 ~~l~~Leae~q~L 21 (119)
T 3etw_A 9 GELQALDAEYQNL 21 (119)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 377
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=24.64 E-value=88 Score=20.35 Aligned_cols=19 Identities=11% Similarity=-0.067 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHhhcHHh
Q 021465 180 EHRRLRATFEYEKGLNIDN 198 (312)
Q Consensus 180 Elq~~RaaiE~EKk~~~el 198 (312)
+...-++.|+.-|+.|.-+
T Consensus 8 Kn~a~qqDIddlkrQN~~L 26 (34)
T 1a93_B 8 KNDTHQQDIDDLKRQNALL 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHhhHHHHHHHHHHH
Confidence 3333333333333333333
No 378
>3v47_C Flagellin; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Salmonella enterica subsp}
Probab=24.52 E-value=1.8e+02 Score=28.58 Aligned_cols=46 Identities=15% Similarity=0.183 Sum_probs=17.3
Q ss_pred hhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 112 IAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEAL 157 (312)
Q Consensus 112 ~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL 157 (312)
+.+|.++++.++....-+.....-+|--...-.++..-+|.+++-.
T Consensus 10 a~~lrsqi~gl~Qa~rN~~dgiS~lqtAEgAL~~i~~iLqRmRELa 55 (425)
T 3v47_C 10 ANRFTSNIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELS 55 (425)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666666555555555555555555554433
No 379
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=24.49 E-value=2.7e+02 Score=22.22 Aligned_cols=55 Identities=7% Similarity=0.193 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 174 LDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHAEVVNAEM 228 (312)
Q Consensus 174 Le~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrAEIanaek 228 (312)
|+.....++..-+++......-.|+.++|+..+.+..++...+=-|+-||++..|
T Consensus 50 iaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kk 104 (114)
T 2xzr_A 50 IAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKK 104 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3333444444445555555566667777777777777777777777777777654
No 380
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=24.48 E-value=2.8e+02 Score=26.55 Aligned_cols=84 Identities=18% Similarity=0.222 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccch--hHHHHHHHHHHHHHHHHHHHHH--HHhhcHHhHHHHHHH--HHHHHHHHH-HHHH
Q 021465 146 LTSKIQQASEALHKARLEVKNLP--DLHAELDSLRQEHRRLRATFEY--EKGLNIDNVEQLQAM--EKNLVGMAR-EMEK 218 (312)
Q Consensus 146 L~aevq~l~~EL~r~kad~qql~--alraELe~LrqElq~~RaaiE~--EKk~~~elleq~qaM--EknL~~mar-Evek 218 (312)
|..++..+..+++.+...+..-. ........+-+|+..++..++. +.+...+.++.+..| ...|.+|+. |++.
T Consensus 1 ~~~~l~~~~~r~~el~~~~~~p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~~~~~~~el~~D~e~~~~a~~e~~~ 80 (354)
T 3d5a_X 1 MLDKLDRLEEEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAEREA 80 (354)
T ss_dssp CHHHHHHHTHHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHhcCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHh
Q 021465 219 LHAEVVNAEMR 229 (312)
Q Consensus 219 LrAEIanaekr 229 (312)
|..+|...+.+
T Consensus 81 l~~~~~~le~~ 91 (354)
T 3d5a_X 81 LLARKEALEKE 91 (354)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
No 381
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=24.31 E-value=4e+02 Score=24.10 Aligned_cols=61 Identities=21% Similarity=0.240 Sum_probs=43.1
Q ss_pred chhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 99 TESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLE 163 (312)
Q Consensus 99 ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad 163 (312)
+.+-.++|.....+...|..| .+.|..=..+..++++|..-+- -..++..+.+||.+..++
T Consensus 86 a~~~d~yR~~LK~IR~~E~sv---qp~R~~R~~l~~~I~kLk~k~P-~s~kl~~LeqELvraEae 146 (234)
T 3plt_A 86 IDKYDQYRVTLKSIRNIEASV---QPSRDRKEKITDEIAHLKYKDP-QSTKIPVLEQELVRAEAE 146 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCT-TCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHhccCC-CCchHHHHHHHHHHHHHH
Confidence 345668899999999999544 5666666666777777664332 246778888888887763
No 382
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=24.29 E-value=2.8e+02 Score=22.38 Aligned_cols=61 Identities=21% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021465 104 HIRVLLDKIAKMEADC-KAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEV 164 (312)
Q Consensus 104 qiR~L~ek~~k~Eael-ra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~ 164 (312)
+|+.+.+....-+..+ ...+.|+..+.++..++..|...++.|...+....+.+.....++
T Consensus 64 eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~~~~~~~ 125 (142)
T 3gp4_A 64 ALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEEL 125 (142)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 383
>1dn1_B Syntaxin 1A, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3c98_B
Probab=24.03 E-value=3.9e+02 Score=23.85 Aligned_cols=107 Identities=13% Similarity=0.196 Sum_probs=0.0
Q ss_pred HHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcccc-hhHHHHHHHHHHHHH--
Q 021465 109 LDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKI---QQASEALHKARLEVKNL-PDLHAELDSLRQEHR-- 182 (312)
Q Consensus 109 ~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aev---q~l~~EL~r~kad~qql-~alraELe~LrqElq-- 182 (312)
++...-|+.=+..++.++..+..++..+..|...-+.++... ..++++|+....++..+ ..++..|..|.+.+.
T Consensus 24 ~~~~~~m~~F~~~v~~I~~~I~~I~~~v~~l~~l~~~~l~~~~~~~~~~~~l~~l~~~i~~~~~~i~~~Lk~l~~~~~~~ 103 (267)
T 1dn1_B 24 VDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 103 (267)
T ss_dssp ---CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q ss_pred ----------HHHHH-HHHHHhhcHHhHHHHHHHHHHHHHHHHH
Q 021465 183 ----------RLRAT-FEYEKGLNIDNVEQLQAMEKNLVGMARE 215 (312)
Q Consensus 183 ----------~~Raa-iE~EKk~~~elleq~qaMEknL~~marE 215 (312)
+.|.. +..-.+...+.+.+-+..+.++..-.++
T Consensus 104 ~~~~~~~~e~Rirk~q~~~L~~~f~~~m~~yq~~Q~~y~e~~k~ 147 (267)
T 1dn1_B 104 EGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKG 147 (267)
T ss_dssp HHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 384
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=23.96 E-value=2.6e+02 Score=21.81 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 198 NVEQLQAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 198 lleq~qaMEknL~~marEvekLrAEIanae 227 (312)
+=+.++..+.|.......+++=..+|..+.
T Consensus 47 Qge~Id~Ie~nv~~a~~~v~~g~~eL~kA~ 76 (109)
T 3hd7_B 47 QGEMIDRIEYNVEHAVDYVERAVSDTKKAV 76 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456777777777777777777776654
No 385
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=23.88 E-value=97 Score=25.43 Aligned_cols=16 Identities=13% Similarity=0.221 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 021465 145 ELTSKIQQASEALHKA 160 (312)
Q Consensus 145 eL~aevq~l~~EL~r~ 160 (312)
+|...++.+.+++...
T Consensus 29 ~l~~~v~~l~~e~k~l 44 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQ 44 (171)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555555554433
No 386
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=23.79 E-value=61 Score=27.97 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=17.5
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSL 139 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L 139 (312)
++.++.++..++-||. +.+|+-....+.++.++
T Consensus 34 e~~e~~d~~lR~~Ae~---eN~rkR~~rE~e~~~~~ 66 (177)
T 3a6m_A 34 ELKGLKDKYLRLLADF---DNYRKRMEEELKARERE 66 (177)
T ss_dssp TSSSHHHHHHTTTTTT---TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 3344555555555443 45666666666555554
No 387
>1z0k_B FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB gtpases, effector complex, vesicular trafficking, protein transport; HET: GTP MES; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=23.69 E-value=1.4e+02 Score=22.27 Aligned_cols=23 Identities=13% Similarity=0.439 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 021465 198 NVEQLQAMEKNLVGMAREMEKLH 220 (312)
Q Consensus 198 lleq~qaMEknL~~marEvekLr 220 (312)
.++++..++.||-++.+|+++++
T Consensus 44 r~DEV~tLe~NLrEL~~ei~~~q 66 (69)
T 1z0k_B 44 RMDEVRTLQENLRQLQDEYDQQQ 66 (69)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh
Confidence 56788888999999999888875
No 388
>2inr_A DNA topoisomerase 4 subunit A; topoisomerase II fold; HET: DNA; 2.80A {Staphylococcus aureus}
Probab=23.59 E-value=3.1e+02 Score=27.61 Aligned_cols=17 Identities=18% Similarity=0.106 Sum_probs=6.7
Q ss_pred HHHHHHHhhhhhHhhhh
Q 021465 105 IRVLLDKIAKMEADCKA 121 (312)
Q Consensus 105 iR~L~ek~~k~Eaelra 121 (312)
++.+.++...+|.-+++
T Consensus 389 L~k~~~r~hilegl~~a 405 (514)
T 2inr_A 389 LDNAEKRMHIVEGLIKA 405 (514)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333444444443333
No 389
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=23.58 E-value=2e+02 Score=26.76 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHH----------
Q 021465 121 AGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLPDLHAELDSLRQEHRRLRATFEY---------- 190 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~alraELe~LrqElq~~RaaiE~---------- 190 (312)
.+++|-..|..++...+......+.|.+++...++||+..+ +.-+.=.|...|=.|..+++..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~----~a~~af~~~~~~f~~q~~~qe~~~~~~~~~~~~~~ 87 (302)
T 2y3a_B 12 SVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKR----TAIEAFNETIKIFEEQGQTQEKCSKEYLERFRREG 87 (302)
T ss_dssp ---------CCCSSCCHHHHTTTHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTCCC------C
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcC
Q ss_pred ---HHhhcHHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021465 191 ---EKGLNIDNVEQL----QAMEKNLVGMAREMEKLHAEVVNAEMR 229 (312)
Q Consensus 191 ---EKk~~~elleq~----qaMEknL~~marEvekLrAEIanaekr 229 (312)
|+....++.+.+ +++-.-...+..++.--..++-..+++
T Consensus 88 ~~~e~~~~~~n~e~l~~rl~aL~~~~~~~~~eLsf~kgd~~~ier~ 133 (302)
T 2y3a_B 88 NEKEMQRILLNSERLKSRIAEIHESRTKLEQDLRAQASDNREIDKR 133 (302)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhhHHHhHHhh
No 390
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=23.49 E-value=3.7e+02 Score=23.50 Aligned_cols=32 Identities=9% Similarity=0.147 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHHHHH-HHHHhHHHHHHhhhhhc
Q 021465 68 RLAASHITMREDLAA-AQQEIPRIKAHIRNIHT 99 (312)
Q Consensus 68 rLa~th~~L~qeL~a-aq~Elq~L~~~~~~~~a 99 (312)
.|-..|..++.++.+ -+.-+..++.....+..
T Consensus 43 ~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~ 75 (323)
T 3edv_A 43 MLQERFREFARDTGNIGQERVDTVNHLADELIN 75 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 344455566666655 34555555554444433
No 391
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=23.49 E-value=1.8e+02 Score=19.70 Aligned_cols=10 Identities=40% Similarity=0.511 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 021465 124 RLKKDLQQAH 133 (312)
Q Consensus 124 ~lk~EL~q~r 133 (312)
+||.||+.++
T Consensus 4 alkselqalk 13 (48)
T 1g6u_A 4 ALKSELQALK 13 (48)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 392
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=23.40 E-value=4.2e+02 Score=24.01 Aligned_cols=15 Identities=20% Similarity=0.299 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHh
Q 021465 73 HITMREDLAAAQQEI 87 (312)
Q Consensus 73 h~~L~qeL~aaq~El 87 (312)
...|++.|.-.-+||
T Consensus 68 ~eelr~kL~p~~~el 82 (273)
T 3s84_A 68 AEQLRRQLTPYAQRM 82 (273)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444444
No 393
>3pik_A Cation efflux system protein CUSC; beta-barrel, lipoprotein, outer membrane; HET: UNL; 2.30A {Escherichia coli}
Probab=23.38 E-value=4.2e+02 Score=24.01 Aligned_cols=44 Identities=14% Similarity=0.010 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhHHHHHHhhhhhchhhHHHHHHHHHhhhhhHhh
Q 021465 76 MREDLAAAQQEIPRIKAHIRNIHTESDSHIRVLLDKIAKMEADC 119 (312)
Q Consensus 76 L~qeL~aaq~Elq~L~~~~~~~~ae~e~qiR~L~ek~~k~Eael 119 (312)
.+..+..++.++..........+.+-..+++..+-........+
T Consensus 123 ~~~~~~~A~~~~~~a~~~~~~~~~~l~~~v~~ay~~~~~~~~~~ 166 (446)
T 3pik_A 123 LKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQL 166 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555544444555555555555555555444433
No 394
>1gl2_A Endobrevin; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=23.35 E-value=2e+02 Score=20.37 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=20.0
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQ 137 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q 137 (312)
-|-.+++++-|||....-.+.|.....+-+..+.
T Consensus 28 NI~~vL~RgekLd~L~~ks~~L~~~s~~F~k~A~ 61 (65)
T 1gl2_A 28 NVERILARGENLDHLRNKTEDLEATSEHFKTTSQ 61 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777655555555555444444333
No 395
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=23.12 E-value=22 Score=32.22 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 021465 175 DSLRQEHRRLRA 186 (312)
Q Consensus 175 e~LrqElq~~Ra 186 (312)
+.+++|..++|.
T Consensus 46 ~~l~~En~rLr~ 57 (255)
T 2j5u_A 46 ADLKKENKDLKE 57 (255)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444444
No 396
>2kk9_A M protein, serotype 5; S. pyogenes, synthetic peptide vaccine, cell WAL peptidoglycan-anchor, phagocytosis, secreted, virulence, UN function; NMR {Synthetic}
Probab=23.11 E-value=4.5 Score=29.28 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=29.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 021465 119 CKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARLEVKNLP 168 (312)
Q Consensus 119 lra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql~ 168 (312)
|.+....|++|+ ++.++|....|-.-+..+.++.+|+..+.-.++++
T Consensus 7 LeAsR~aKk~lE---Ae~qKLeEekqiseasr~~l~rdL~asr~akk~~e 53 (56)
T 2kk9_A 7 LDASREAKKQLE---AEQQKLEEQNKISEASRKGLRRDLDASREAKKQVE 53 (56)
T ss_dssp SSCCSHHHHHHH---HHHHHHHHHHHHHHHCSSSSSSSTTSSSTTTTSCS
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHHh
Confidence 333444555554 67788888887777777777777766655444443
No 397
>2py8_A Hypothetical protein RBCX; all helical fold, chaperone; HET: PE4; 2.45A {Synechocystis SP} SCOP: a.280.1.1
Probab=22.97 E-value=2.1e+02 Score=24.20 Aligned_cols=58 Identities=21% Similarity=0.385 Sum_probs=42.4
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHHhHHH-HHHhhhhhchhhHHHHHHHHHhhhhhHh
Q 021465 59 IERLARDNHRLAASHITMREDLAAAQQEIPRI-KAHIRNIHTESDSHIRVLLDKIAKMEAD 118 (312)
Q Consensus 59 i~~L~~dNqrLa~th~~L~qeL~aaq~Elq~L-~~~~~~~~ae~e~qiR~L~ek~~k~Eae 118 (312)
|+.|..+|+-|+--....|..++.---|- | ......|+.+.-..+|++.+++..++.|
T Consensus 57 L~~Lmre~~~LAlRIMeVR~~ya~e~fe~--l~em~~~~I~~~N~elmRq~leR~t~~~~e 115 (147)
T 2py8_A 57 LTELLDENKELVLRILAVREDIAESVLDF--LPGMTRNSLAESNIAHRRHLLERLTRTVAE 115 (147)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 77889999999888888888887732222 3 2344677778888888888888877654
No 398
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=22.92 E-value=2.8e+02 Score=26.12 Aligned_cols=54 Identities=15% Similarity=0.228 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 167 LPDLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNLVGMAREMEKLHA 221 (312)
Q Consensus 167 l~alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL~~marEvekLrA 221 (312)
+..++.+++.+.+++..+...++ ++....+...+++..++++.+..+.+.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 302 (426)
T 1lrz_A 249 IKELNEERDILNKDLNKALKDIE-KRPENKKAHNKRDNLQQQLDANEQKIEEGKR 302 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777788888888777775 4444455566667777777777766665543
No 399
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=22.90 E-value=3.2e+02 Score=22.56 Aligned_cols=18 Identities=0% Similarity=0.017 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021465 144 QELTSKIQQASEALHKAR 161 (312)
Q Consensus 144 qeL~aevq~l~~EL~r~k 161 (312)
..|..+++.+..+..+.+
T Consensus 87 ~~L~~~f~~~~~~fq~~Q 104 (196)
T 1fio_A 87 ENSRQRFLKLIQDYRIVD 104 (196)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444433
No 400
>1ytz_I Troponin I; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.2 PDB: 2w49_2 2w4u_2 1yv0_I 1vdi_A 1vdj_A
Probab=22.79 E-value=3.1e+02 Score=23.91 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
.-+-|.++.--+.-+- ..+.|+.-..+++.-+..|...+-+|..++.....||..++.
T Consensus 40 KkkiLaER~kPLnid~-se~~L~e~ckELh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~ 97 (182)
T 1ytz_I 40 KQNYLAEHSPPLSLPG-SMQELQELSKKLHAKIDSVDEERYDTEVKLQKTNKELEDLSQ 97 (182)
T ss_dssp HHHHHHHHSCCCCCCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHHHH
Confidence 4556667765554444 677899999999999999999999999999999999988885
No 401
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=22.72 E-value=3.3e+02 Score=22.55 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=41.3
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
.-+-|.++.--+.-+-=..+.|+.-..+++.-+.+|...+-+|-.++.....||..++.
T Consensus 42 KkkiLaER~~pL~id~ls~~~L~e~~keLh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~ 100 (133)
T 1j1d_C 42 KGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQ 100 (133)
T ss_dssp HHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHcchHHHHHHH
Confidence 34556666655542222346688888888888999999998888888877777766553
No 402
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=22.66 E-value=6.1e+02 Score=25.69 Aligned_cols=41 Identities=10% Similarity=0.158 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcHHhHHHHHHHHHHH
Q 021465 169 DLHAELDSLRQEHRRLRATFEYEKGLNIDNVEQLQAMEKNL 209 (312)
Q Consensus 169 alraELe~LrqElq~~RaaiE~EKk~~~elleq~qaMEknL 209 (312)
.+...++.++++++++-...+.........+++++..+.++
T Consensus 634 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 674 (695)
T 2j69_A 634 RINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNLQEDV 674 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhHHHH
Confidence 44567777777777777665555555555555666644433
No 403
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=22.52 E-value=2.8e+02 Score=21.63 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021465 206 EKNLVGMAREMEKLHAEVVN 225 (312)
Q Consensus 206 EknL~~marEvekLrAEIan 225 (312)
+..|++....+++|++++.+
T Consensus 61 ~~~L~e~~~kid~L~~el~K 80 (98)
T 2ke4_A 61 EPQIAETLSNIERLKLEVQK 80 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555443
No 404
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=22.51 E-value=3.7e+02 Score=23.02 Aligned_cols=142 Identities=14% Similarity=0.172 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHHHHh------HHHHHHhhhhhchhhHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHH
Q 021465 68 RLAASHITMREDLAAAQQEI------PRIKAHIRNIHTESDSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLAR 141 (312)
Q Consensus 68 rLa~th~~L~qeL~aaq~El------q~L~~~~~~~~ae~e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~ 141 (312)
+|-.....+.+.-..+++-| +.+...+.+.-.+--..+.+|-+++.-+=.+++ ..|-.+++.+|.++++
T Consensus 32 ~~~~y~~~l~~~a~~~~eqL~~s~l~~el~~l~~e~~~~l~~~~~~l~~qL~P~~~e~~--~~l~~~~e~lr~~l~k--- 106 (191)
T 1nfn_A 32 RFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETR--ARLSKELQAAQARLGA--- 106 (191)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH--HHHHHHHHHHHHHHHH---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH--------HHHHHHHHHHHHHHHHHHhhcHHhHHHH-HHHHHHHHHH
Q 021465 142 ARQELTSKIQQASEALHKARLEVKNLPDLHAEL--------DSLRQEHRRLRATFEYEKGLNIDNVEQL-QAMEKNLVGM 212 (312)
Q Consensus 142 ~rqeL~aevq~l~~EL~r~kad~qql~alraEL--------e~LrqElq~~RaaiE~EKk~~~elleq~-qaMEknL~~m 212 (312)
--.+|-+++.-...||...-. +.++.+|..| +.+.+.++.+|..+.---....+.+.+. +.+...|.-+
T Consensus 107 dlEelr~kL~P~~eEL~~~l~--~~~Eelr~~L~Py~eelr~kl~~~~eeLr~~l~P~~eelk~~l~~~veel~~~L~P~ 184 (191)
T 1nfn_A 107 DMEDVCGRLVQYRGEVQAMLG--QSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLGPL 184 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------------------
T ss_pred HHHHHHHHhhHHHHHHHHHHH--HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHhH
Q ss_pred HHHH
Q 021465 213 AREM 216 (312)
Q Consensus 213 arEv 216 (312)
..++
T Consensus 185 ~e~~ 188 (191)
T 1nfn_A 185 VEQG 188 (191)
T ss_dssp ----
T ss_pred HHHH
No 405
>1yc9_A VCEC, multidrug resistance protein; outer membrane protein, multidrug resistanc membrane protein; HET: BOG; 1.80A {Vibrio cholerae}
Probab=22.43 E-value=4.4e+02 Score=23.90 Aligned_cols=13 Identities=15% Similarity=-0.007 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHH
Q 021465 212 MAREMEKLHAEVV 224 (312)
Q Consensus 212 marEvekLrAEIa 224 (312)
....++.-++++.
T Consensus 265 a~~~~~~a~~~~~ 277 (442)
T 1yc9_A 265 ARWRAEAAAQQVG 277 (442)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3344444444444
No 406
>2vkl_A RV0948C/MT0975; helical, intracellular, chorismate mutase, isomerase; 1.65A {Mycobacterium tuberculosis} PDB: 2qbv_A 2w19_C 2w1a_C*
Probab=22.36 E-value=1.9e+02 Score=21.83 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
++.+|+++.++-.++-.|.+.|-.++.++..++.+
T Consensus 14 L~~lR~~ID~iD~~Ll~LL~~R~~~~~~Ig~~K~~ 48 (90)
T 2vkl_A 14 IDTLREEIDRLDAEILALVKRRAEVSKAIGKARMA 48 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677777777777777777777777777766654
No 407
>1ucu_A Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium} SCOP: e.32.1.1 PDB: 3a5x_A
Probab=22.31 E-value=4.2e+02 Score=25.98 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=21.4
Q ss_pred HhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 111 KIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASE 155 (312)
Q Consensus 111 k~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~ 155 (312)
...+|.++++.++....-+.....-+|--...-.++..-++.+++
T Consensus 49 ia~~l~~~i~~l~q~~~N~~~~~s~lqtae~aL~~i~~~Lqr~re 93 (494)
T 1ucu_A 49 IANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRE 93 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555444444444444444444444443
No 408
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=21.91 E-value=1.3e+02 Score=19.28 Aligned_cols=23 Identities=39% Similarity=0.572 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhHHHHHHhhhh
Q 021465 75 TMREDLAAAQQEIPRIKAHIRNI 97 (312)
Q Consensus 75 ~L~qeL~aaq~Elq~L~~~~~~~ 97 (312)
+++.+-++..+|+|.+...|..+
T Consensus 6 aikeeqaaieeeiqaikeeiaai 28 (36)
T 1bb1_B 6 AIKEEQAAIEEEIQAIKEEIAAI 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666665544443
No 409
>1n7s_A Vesicle-associated membrane protein 2; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1kil_A 3rk2_A 3rk3_A 3rl0_A 3fii_B 3g94_B
Probab=21.91 E-value=2.1e+02 Score=20.03 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=21.2
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQS 138 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~ 138 (312)
-|..+.+++-|||....-.+.|.....+-+..+.+
T Consensus 23 NI~~vl~RGekLd~L~~ks~~L~~~s~~F~~~a~~ 57 (63)
T 1n7s_A 23 NVDKVLERDQKLSELDDRADALQAGASQFETSAAK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667778877776555556666555544444444
No 410
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=21.84 E-value=5.6e+02 Score=24.89 Aligned_cols=27 Identities=19% Similarity=0.300 Sum_probs=20.1
Q ss_pred hhhhhhHHHHHHHHHHHHHHhHHHHHH
Q 021465 67 HRLAASHITMREDLAAAQQEIPRIKAH 93 (312)
Q Consensus 67 qrLa~th~~L~qeL~aaq~Elq~L~~~ 93 (312)
+.|-..|..|+.++++....|..|...
T Consensus 38 e~LLqKH~~lE~eI~a~~~~v~~l~~~ 64 (450)
T 3r6n_A 38 EQHINSHRGIHNSIGDYRWQLDKIKAD 64 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666888888888888888877654
No 411
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=21.55 E-value=1.6e+02 Score=20.04 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 145 ELTSKIQQASEALHKAR 161 (312)
Q Consensus 145 eL~aevq~l~~EL~r~k 161 (312)
+|+.++...-+|+++.+
T Consensus 6 ~l~qkI~kVdrEI~Kte 22 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVE 22 (42)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555555555555
No 412
>2d8d_A Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase/chori mutase; chorismate, dimer, structural genomics, NPPSFA; 1.15A {Thermus thermophilus} SCOP: a.130.1.1 PDB: 2d8e_A
Probab=21.53 E-value=2.1e+02 Score=21.16 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAHIEAQSLARARQELTSKIQQASEA 156 (312)
Q Consensus 122 ~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~E 156 (312)
++.+|.++..+-.++-.|.+.|-.++.++...+.+
T Consensus 5 L~~lR~~ID~iD~~l~~Ll~~R~~~~~~i~~~K~~ 39 (90)
T 2d8d_A 5 IQALRKEVDRVNREILRLLSERGRLVQEIGRLQTE 39 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666666666666666666666554
No 413
>3ilw_A DNA gyrase subunit A; DNA topology, topoisomerase, antibiotic resistance, breakage-reunion domain, struct genomics; HET: DNA; 1.60A {Mycobacterium tuberculosis} SCOP: e.11.1.0 PDB: 3ifz_A*
Probab=21.46 E-value=3.7e+02 Score=26.67 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=11.9
Q ss_pred HHHHHHHHHhhhhhHhhhhhHHHH
Q 021465 103 SHIRVLLDKIAKMEADCKAGERLK 126 (312)
Q Consensus 103 ~qiR~L~ek~~k~Eaelra~e~lk 126 (312)
-.++.+.++..-+|..+.+...+.
T Consensus 349 ~~L~k~~~r~hilegl~~a~~~iD 372 (470)
T 3ilw_A 349 YRLRKANERAHILRGLVKALDALD 372 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555544443
No 414
>1lwu_B Fibrinogen beta chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_B*
Probab=21.46 E-value=1.4e+02 Score=28.15 Aligned_cols=26 Identities=15% Similarity=0.351 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 201 QLQAMEKNLVGMAREMEKLHAEVVNA 226 (312)
Q Consensus 201 q~qaMEknL~~marEvekLrAEIana 226 (312)
+++.|+..+..+...|.+|+..|...
T Consensus 29 ~I~~Lq~~le~L~~KI~~LE~~v~~q 54 (323)
T 1lwu_B 29 SLRSMKSVLEHLRAKMQRMEEAIKTQ 54 (323)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555666666666666666543
No 415
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=21.41 E-value=83 Score=28.33 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=7.4
Q ss_pred hhHHHHHHHHHHHHHHH
Q 021465 121 AGERLKKDLQQAHIEAQ 137 (312)
Q Consensus 121 a~e~lk~EL~q~r~e~q 137 (312)
+++.||+|+.+++.+..
T Consensus 27 eN~~Lk~e~~~l~~~~~ 43 (255)
T 2j5u_A 27 ENQHLKERLEELAQLES 43 (255)
T ss_dssp TTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444333
No 416
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=21.40 E-value=29 Score=32.81 Aligned_cols=14 Identities=0% Similarity=0.233 Sum_probs=4.8
Q ss_pred hHHHHHHHHHhhhh
Q 021465 102 DSHIRVLLDKIAKM 115 (312)
Q Consensus 102 e~qiR~L~ek~~k~ 115 (312)
-.+.|.+.|+...+
T Consensus 162 p~eRr~~ld~~~g~ 175 (430)
T 1w1w_A 162 PVELSRMFEEVSGS 175 (430)
T ss_dssp HHHHHHTC------
T ss_pred HHHHHHHHHHHhCc
Confidence 44566666666543
No 417
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=21.33 E-value=1.6e+02 Score=27.30 Aligned_cols=9 Identities=33% Similarity=0.394 Sum_probs=2.7
Q ss_pred CCCCCCCCC
Q 021465 242 NPIPSYPPS 250 (312)
Q Consensus 242 n~~~~~~~~ 250 (312)
+++..|++.
T Consensus 256 d~~re~~f~ 264 (315)
T 2ve7_A 256 NPESPFMFS 264 (315)
T ss_dssp CCCCCC---
T ss_pred CCCceEEEE
Confidence 344444443
No 418
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.23 E-value=1.1e+02 Score=29.74 Aligned_cols=11 Identities=36% Similarity=0.616 Sum_probs=4.9
Q ss_pred HHHHHHHHHHH
Q 021465 214 REMEKLHAEVV 224 (312)
Q Consensus 214 rEvekLrAEIa 224 (312)
+++.+++.|+.
T Consensus 77 ~e~~~~~ee~~ 87 (428)
T 4b4t_K 77 RELKRAQEEVK 87 (428)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444444
No 419
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=21.05 E-value=4.2e+02 Score=23.18 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 021465 138 SLARARQELTSKIQQASEAL 157 (312)
Q Consensus 138 ~L~~~rqeL~aevq~l~~EL 157 (312)
++....+....++...++..
T Consensus 125 k~~k~~~~~~~~l~kaKk~Y 144 (290)
T 3i2w_A 125 KAQKPWAKLLAKVEKAKADY 144 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444433
No 420
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=20.82 E-value=4.1e+02 Score=23.00 Aligned_cols=35 Identities=23% Similarity=0.187 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 123 ERLKKDLQQAHIEAQSLARARQELTSKIQQASEAL 157 (312)
Q Consensus 123 e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL 157 (312)
..+...|+..|+.++.+...-+.|-.++....+++
T Consensus 82 l~l~~~Le~~r~~l~~~l~~~~~L~~~~~~k~q~~ 116 (192)
T 2p22_C 82 EENFEDLHEQKDKVQALLENARILESKYVASWQDY 116 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666666665555555554444444
No 421
>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2
Probab=20.68 E-value=4.2e+02 Score=23.03 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=43.5
Q ss_pred HHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 104 HIRVLLDKIAKMEADCKAGERLKKDLQQAHIEAQSLARARQELTSKIQQASEALHKARL 162 (312)
Q Consensus 104 qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~q~L~~~rqeL~aevq~l~~EL~r~ka 162 (312)
.-+-|.++.--+.-+==..+.|+.-..+++.-+..|...+-+|-..+....-||..++.
T Consensus 42 KkkiLaER~kPLnid~Lse~~L~e~ckELh~~I~~LEeEKYDlE~kvkkqdyEI~dL~~ 100 (180)
T 1j1e_C 42 KGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQ 100 (180)
T ss_dssp HHHHHHHHSCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchhHHHHHH
Confidence 45566677766633332457788888899999999999999998888877777766654
No 422
>3nkz_A Flagellar protein FLIT; structural genomics, PSI-2, protein structure initiative, MC midwest center for structural genomics; HET: MSE PG4; 2.11A {Yersinia enterocolitica subsp}
Probab=20.41 E-value=3.4e+02 Score=21.81 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=18.6
Q ss_pred hHHHHHHHHHhhhhhHhhhhhHHHHHHHHHHHHHH
Q 021465 102 DSHIRVLLDKIAKMEADCKAGERLKKDLQQAHIEA 136 (312)
Q Consensus 102 e~qiR~L~ek~~k~Eaelra~e~lk~EL~q~r~e~ 136 (312)
..+.|.++.++..-|+++| .-+...+.++...+
T Consensus 64 ~~~~~~lL~~IL~nDaeIR--~Ll~~rl~eL~~li 96 (123)
T 3nkz_A 64 QDLLREKLRAILDNEIEIK--RLLQLRLDRLSDLV 96 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHHHH
Confidence 3456677777777777766 33444444444433
No 423
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=20.29 E-value=52 Score=25.05 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=12.7
Q ss_pred HHHHHHHHhhhhhHh
Q 021465 104 HIRVLLDKIAKMEAD 118 (312)
Q Consensus 104 qiR~L~ek~~k~Eae 118 (312)
+|.+|++|+..||.|
T Consensus 23 ~I~EL~e~~~qLE~E 37 (78)
T 1dip_A 23 QIRELVEKNSQLERE 37 (78)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999999888865
No 424
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=20.10 E-value=3.8e+02 Score=22.33 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------hhHHHHHHHHHHHHHHHHHHHH
Q 021465 122 GERLKKDLQQAH--IEAQSLARARQELTSKIQQASEALHKARLEVKNL-------PDLHAELDSLRQEHRRLRATFE 189 (312)
Q Consensus 122 ~e~lk~EL~q~r--~e~q~L~~~rqeL~aevq~l~~EL~r~kad~qql-------~alraELe~LrqElq~~RaaiE 189 (312)
-+.|+ .+.|.. .|++-+...|+.=..+++..++..+|.+.-.-.+ -..+..||.+-..|..++.+++
T Consensus 32 p~~Lq-~wLq~T~E~E~q~~~~kk~~Aekql~~Ake~~eKlkKKrsSv~gs~~~aHs~~sslD~vD~~Il~Ak~aL~ 107 (136)
T 3ter_A 32 PLALQ-PLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGSVLSSLKLATGAASTSDQVDSKIFALKSRME 107 (136)
T ss_dssp CTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHH-HHHHHHhHHHHHHHHHccccHHHHHHHHHHHHHHHHHhhhchheeeeeecCCCCchHHHHHHHHHHHHHHH
Confidence 44455 444443 5666666666666667777777776666410000 1111455666666766666644
No 425
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}
Probab=20.02 E-value=4.9e+02 Score=23.57 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=24.4
Q ss_pred HHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021465 196 IDNVEQL-QAMEKNLVGMAREMEKLHAEVVNAE 227 (312)
Q Consensus 196 ~elleq~-qaMEknL~~marEvekLrAEIanae 227 (312)
.+-+|=+ .+|-+..+++..+++.|+..|.++|
T Consensus 215 ~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TE 247 (261)
T 3rkg_A 215 FSDLEMLIETYYTQCDEYVQQSESLIQDIKSTE 247 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344443 7888888888999999988888876
No 426
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=20.02 E-value=1.7e+02 Score=18.91 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 021465 134 IEAQSLARARQELTSKI 150 (312)
Q Consensus 134 ~e~q~L~~~rqeL~aev 150 (312)
..+..|.....+|-.+|
T Consensus 7 ~kVEeLl~~n~~Le~EV 23 (33)
T 3m48_A 7 AKVEELLSKNWNLENEV 23 (33)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHH
Confidence 33333333333333333
Done!