Query 021466
Match_columns 312
No_of_seqs 228 out of 1578
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 03:10:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021466.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021466hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02473 glutathione S-transfe 100.0 2.3E-33 4.9E-38 242.5 21.3 204 1-205 1-211 (214)
2 PRK09481 sspA stringent starva 100.0 1.1E-32 2.4E-37 237.8 21.7 191 3-205 11-202 (211)
3 PLN02395 glutathione S-transfe 100.0 1.2E-32 2.6E-37 238.1 21.1 205 1-207 1-212 (215)
4 PRK13972 GSH-dependent disulfi 100.0 3.3E-32 7.1E-37 235.5 19.9 199 3-208 2-208 (215)
5 PRK10542 glutathionine S-trans 100.0 1.9E-31 4.2E-36 228.1 18.9 193 3-205 1-197 (201)
6 PRK10357 putative glutathione 100.0 4.3E-31 9.3E-36 226.2 20.7 198 3-204 1-199 (202)
7 PRK15113 glutathione S-transfe 100.0 3.8E-31 8.2E-36 228.7 20.0 197 3-206 6-209 (214)
8 KOG0867 Glutathione S-transfer 100.0 5E-31 1.1E-35 229.1 19.0 205 1-206 1-210 (226)
9 TIGR01262 maiA maleylacetoacet 100.0 1E-30 2.2E-35 225.1 19.8 197 4-206 1-205 (210)
10 COG0625 Gst Glutathione S-tran 100.0 1.7E-30 3.7E-35 224.1 21.0 194 3-200 1-199 (211)
11 PRK11752 putative S-transferas 100.0 1.4E-29 3.1E-34 225.3 21.8 200 2-206 44-259 (264)
12 KOG0406 Glutathione S-transfer 100.0 6.8E-29 1.5E-33 210.7 20.4 196 3-207 10-213 (231)
13 KOG0868 Glutathione S-transfer 100.0 1.5E-28 3.3E-33 196.3 15.2 199 3-206 6-208 (217)
14 PRK10387 glutaredoxin 2; Provi 99.9 7.1E-27 1.5E-31 201.2 17.2 185 3-199 1-207 (210)
15 PLN02378 glutathione S-transfe 99.9 6.6E-27 1.4E-31 202.0 16.2 182 8-209 17-203 (213)
16 PTZ00057 glutathione s-transfe 99.9 5.7E-26 1.2E-30 195.0 20.3 186 3-207 5-201 (205)
17 TIGR00862 O-ClC intracellular 99.9 2.4E-25 5.1E-30 193.5 19.3 184 9-209 17-224 (236)
18 PLN02817 glutathione dehydroge 99.9 2.3E-25 4.9E-30 197.6 18.0 179 9-207 71-253 (265)
19 KOG1695 Glutathione S-transfer 99.9 8E-25 1.7E-29 184.7 17.8 198 1-208 1-203 (206)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 4.3E-24 9.4E-29 183.9 15.8 182 4-199 1-206 (209)
21 PLN02907 glutamate-tRNA ligase 99.9 7E-24 1.5E-28 209.6 18.0 158 1-198 1-159 (722)
22 KOG4420 Uncharacterized conser 99.9 1.4E-21 3E-26 165.2 13.0 204 3-207 27-289 (325)
23 KOG1422 Intracellular Cl- chan 99.7 1.1E-16 2.4E-21 132.1 13.7 185 10-210 20-210 (221)
24 cd03181 GST_C_EFB1gamma GST_C 99.7 4.3E-16 9.3E-21 122.4 11.7 121 90-210 1-121 (123)
25 cd03044 GST_N_EF1Bgamma GST_N 99.7 4.6E-16 1E-20 111.6 8.6 72 4-76 2-74 (75)
26 KOG3029 Glutathione S-transfer 99.6 2.3E-15 5E-20 129.0 11.3 187 3-195 91-354 (370)
27 cd03196 GST_C_5 GST_C family, 99.6 3.4E-15 7.4E-20 116.2 11.0 112 87-202 3-114 (115)
28 PF13417 GST_N_3: Glutathione 99.6 1.2E-15 2.6E-20 109.5 7.5 74 5-81 1-74 (75)
29 PF00647 EF1G: Elongation fact 99.6 3.5E-17 7.7E-22 122.4 -0.5 38 261-300 1-38 (107)
30 cd03045 GST_N_Delta_Epsilon GS 99.6 1.6E-15 3.6E-20 108.3 8.1 73 3-76 1-74 (74)
31 cd03052 GST_N_GDAP1 GST_N fami 99.6 1.7E-15 3.6E-20 108.0 8.0 72 3-75 1-73 (73)
32 PF02798 GST_N: Glutathione S- 99.6 1.3E-15 2.8E-20 109.5 7.1 73 1-76 1-76 (76)
33 cd03048 GST_N_Ure2p_like GST_N 99.6 2.8E-15 6.1E-20 109.1 8.7 75 3-79 2-80 (81)
34 cd03059 GST_N_SspA GST_N famil 99.6 3.4E-15 7.3E-20 106.3 8.3 72 3-77 1-72 (73)
35 cd03182 GST_C_GTT2_like GST_C 99.6 1.1E-14 2.4E-19 113.3 11.8 111 87-199 1-117 (117)
36 cd03188 GST_C_Beta GST_C famil 99.6 6.6E-15 1.4E-19 113.9 10.2 111 90-203 2-114 (114)
37 cd03041 GST_N_2GST_N GST_N fam 99.6 3.4E-15 7.4E-20 107.6 7.5 73 3-77 2-76 (77)
38 cd03178 GST_C_Ure2p_like GST_C 99.6 5.1E-15 1.1E-19 114.5 8.9 111 90-203 1-112 (113)
39 cd03060 GST_N_Omega_like GST_N 99.6 4.8E-15 1E-19 105.1 8.0 68 4-74 2-70 (71)
40 cd03053 GST_N_Phi GST_N family 99.6 8.5E-15 1.8E-19 105.2 8.5 73 3-76 2-75 (76)
41 cd03057 GST_N_Beta GST_N famil 99.6 7.9E-15 1.7E-19 105.7 8.3 75 3-79 1-77 (77)
42 cd03050 GST_N_Theta GST_N fami 99.6 8.2E-15 1.8E-19 105.3 8.3 74 3-77 1-75 (76)
43 cd03189 GST_C_GTT1_like GST_C 99.6 2E-14 4.3E-19 112.3 11.2 110 85-197 2-119 (119)
44 cd03056 GST_N_4 GST_N family, 99.6 9.2E-15 2E-19 104.0 8.1 72 3-75 1-73 (73)
45 cd03047 GST_N_2 GST_N family, 99.6 1E-14 2.2E-19 104.0 8.0 72 3-75 1-73 (73)
46 cd03187 GST_C_Phi GST_C family 99.6 3.4E-14 7.5E-19 110.6 11.3 112 90-203 2-118 (118)
47 cd03076 GST_N_Pi GST_N family, 99.6 6E-15 1.3E-19 105.2 6.1 72 2-76 1-72 (73)
48 cd03058 GST_N_Tau GST_N family 99.6 1.6E-14 3.5E-19 103.2 8.1 72 3-77 1-73 (74)
49 cd03051 GST_N_GTT2_like GST_N 99.6 1.6E-14 3.5E-19 102.9 8.1 72 3-75 1-74 (74)
50 cd03186 GST_C_SspA GST_N famil 99.6 6.5E-14 1.4E-18 107.3 11.8 105 89-202 2-106 (107)
51 cd03191 GST_C_Zeta GST_C famil 99.5 4.7E-14 1E-18 110.6 10.9 114 89-205 2-119 (121)
52 cd03049 GST_N_3 GST_N family, 99.5 2E-14 4.4E-19 102.4 7.9 70 3-75 1-73 (73)
53 cd03055 GST_N_Omega GST_N fami 99.5 2.1E-14 4.5E-19 106.5 8.2 72 1-75 17-89 (89)
54 cd03185 GST_C_Tau GST_C family 99.5 5.2E-14 1.1E-18 111.0 11.0 111 89-206 2-116 (126)
55 cd03046 GST_N_GTT1_like GST_N 99.5 2.3E-14 4.9E-19 102.9 8.1 75 3-79 1-76 (76)
56 cd03039 GST_N_Sigma_like GST_N 99.5 7.9E-15 1.7E-19 104.3 5.5 72 3-76 1-72 (72)
57 cd03042 GST_N_Zeta GST_N famil 99.5 3.2E-14 7E-19 101.2 7.9 72 3-75 1-73 (73)
58 cd03037 GST_N_GRX2 GST_N famil 99.5 3E-14 6.6E-19 100.9 7.5 70 3-76 1-71 (71)
59 cd03180 GST_C_2 GST_C family, 99.5 1.1E-13 2.4E-18 106.2 11.1 107 90-199 2-110 (110)
60 cd03061 GST_N_CLIC GST_N famil 99.5 3.7E-14 7.9E-19 104.6 7.9 69 9-80 20-88 (91)
61 cd03177 GST_C_Delta_Epsilon GS 99.5 7E-14 1.5E-18 109.2 9.5 108 90-203 2-110 (118)
62 cd03190 GST_C_ECM4_like GST_C 99.5 1.5E-13 3.2E-18 111.0 11.3 111 89-205 3-118 (142)
63 KOG4244 Failed axon connection 99.5 3.5E-13 7.5E-18 115.3 12.0 173 10-195 60-272 (281)
64 cd03183 GST_C_Theta GST_C fami 99.5 4.4E-13 9.5E-18 105.8 10.7 113 91-205 2-122 (126)
65 COG2999 GrxB Glutaredoxin 2 [P 99.5 1.2E-12 2.6E-17 105.3 13.1 186 3-200 1-208 (215)
66 cd03075 GST_N_Mu GST_N family, 99.5 1.6E-13 3.5E-18 100.0 7.3 73 4-77 2-81 (82)
67 PF13409 GST_N_2: Glutathione 99.5 1.2E-13 2.6E-18 97.6 6.3 66 10-76 1-69 (70)
68 cd03200 GST_C_JTV1 GST_C famil 99.5 2.9E-13 6.2E-18 101.8 8.5 96 71-196 1-96 (96)
69 cd03206 GST_C_7 GST_C family, 99.4 2.3E-13 4.9E-18 103.1 6.8 100 94-199 1-100 (100)
70 cd03207 GST_C_8 GST_C family, 99.4 3.6E-13 7.9E-18 102.4 7.5 100 95-204 2-101 (103)
71 cd03077 GST_N_Alpha GST_N fami 99.4 5.7E-13 1.2E-17 96.5 7.5 71 3-79 2-77 (79)
72 COG0435 ECM4 Predicted glutath 99.4 6.8E-13 1.5E-17 114.0 9.0 193 3-203 52-284 (324)
73 cd03209 GST_C_Mu GST_C family, 99.4 3.4E-12 7.3E-17 100.1 12.2 113 90-210 2-114 (121)
74 cd03040 GST_N_mPGES2 GST_N fam 99.4 1E-12 2.2E-17 94.6 7.8 70 3-77 2-75 (77)
75 cd03043 GST_N_1 GST_N family, 99.4 8.6E-13 1.9E-17 94.0 7.2 67 8-75 7-73 (73)
76 cd03184 GST_C_Omega GST_C fami 99.4 2.3E-12 5E-17 101.5 10.1 109 90-207 2-115 (124)
77 cd00570 GST_N_family Glutathio 99.4 1.4E-12 3E-17 91.1 7.6 71 3-75 1-71 (71)
78 cd03080 GST_N_Metaxin_like GST 99.4 1.2E-12 2.6E-17 93.8 7.2 66 3-78 2-74 (75)
79 cd03179 GST_C_1 GST_C family, 99.4 1.2E-12 2.6E-17 99.7 7.6 102 90-194 2-105 (105)
80 cd03038 GST_N_etherase_LigE GS 99.4 1.1E-12 2.3E-17 96.2 6.7 69 9-79 14-84 (84)
81 cd03203 GST_C_Lambda GST_C fam 99.4 6.8E-12 1.5E-16 98.3 11.2 106 87-206 1-112 (120)
82 cd03210 GST_C_Pi GST_C family, 99.3 2.4E-11 5.2E-16 96.0 12.2 112 90-210 3-117 (126)
83 cd03204 GST_C_GDAP1 GST_C fami 99.3 6.9E-12 1.5E-16 96.3 8.6 79 121-199 21-111 (111)
84 PF00043 GST_C: Glutathione S- 99.3 9.5E-12 2.1E-16 93.0 8.9 74 123-197 22-95 (95)
85 cd03198 GST_C_CLIC GST_C famil 99.3 1.4E-11 3.1E-16 97.6 10.3 84 123-206 23-125 (134)
86 cd00299 GST_C_family Glutathio 99.3 1.3E-11 2.9E-16 92.5 7.7 99 95-193 2-100 (100)
87 cd03208 GST_C_Alpha GST_C fami 99.3 5.3E-11 1.2E-15 95.4 11.5 111 90-207 3-117 (137)
88 cd03195 GST_C_4 GST_C family, 99.3 3.3E-11 7.2E-16 93.5 9.7 109 89-204 2-112 (114)
89 PF13410 GST_C_2: Glutathione 99.3 2.1E-11 4.6E-16 85.6 7.9 68 125-192 2-69 (69)
90 PF14497 GST_C_3: Glutathione 99.3 6.9E-12 1.5E-16 94.8 5.5 95 88-195 3-99 (99)
91 KOG3027 Mitochondrial outer me 99.3 1.4E-10 3E-15 95.6 13.0 175 10-195 33-247 (257)
92 KOG2903 Predicted glutathione 99.2 2.2E-11 4.7E-16 103.8 7.7 193 3-203 38-286 (319)
93 cd03054 GST_N_Metaxin GST_N fa 99.2 3E-11 6.5E-16 85.7 7.1 64 3-76 1-71 (72)
94 KOG3028 Translocase of outer m 99.2 1.8E-09 3.9E-14 95.0 17.7 175 11-195 17-233 (313)
95 cd03201 GST_C_DHAR GST_C famil 99.2 2.3E-10 4.9E-15 89.8 9.9 79 128-206 29-111 (121)
96 cd03192 GST_C_Sigma_like GST_C 99.1 1.9E-10 4.2E-15 87.4 8.2 100 90-193 2-104 (104)
97 cd03194 GST_C_3 GST_C family, 99.1 6.7E-10 1.4E-14 86.2 10.9 105 94-204 3-113 (114)
98 cd03205 GST_C_6 GST_C family, 99.1 5.3E-10 1.1E-14 84.2 8.8 96 95-193 2-98 (98)
99 cd03193 GST_C_Metaxin GST_C fa 99.0 9.2E-10 2E-14 81.2 7.8 66 129-194 19-88 (88)
100 cd03079 GST_N_Metaxin2 GST_N f 98.9 2.4E-09 5.2E-14 75.8 6.5 59 9-76 15-73 (74)
101 cd03202 GST_C_etherase_LigE GS 98.9 4.3E-09 9.4E-14 82.9 7.8 69 127-196 56-124 (124)
102 KOG1147 Glutamyl-tRNA syntheta 98.7 3.1E-08 6.8E-13 92.6 6.7 121 60-206 43-165 (712)
103 cd03197 GST_C_mPGES2 GST_C fam 98.7 3.8E-08 8.2E-13 78.9 6.1 65 129-195 79-145 (149)
104 cd03211 GST_C_Metaxin2 GST_C f 98.7 3.5E-08 7.7E-13 77.9 5.8 69 124-193 52-125 (126)
105 cd03212 GST_C_Metaxin1_3 GST_C 98.7 5.9E-08 1.3E-12 77.7 7.0 71 125-195 60-134 (137)
106 TIGR02190 GlrX-dom Glutaredoxi 98.6 2.2E-07 4.8E-12 67.0 7.0 72 1-75 8-79 (79)
107 cd03078 GST_N_Metaxin1_like GS 98.5 2.7E-07 5.9E-12 65.5 6.7 57 11-77 16-72 (73)
108 PRK10638 glutaredoxin 3; Provi 98.4 6.7E-07 1.4E-11 65.1 6.7 74 1-76 1-75 (83)
109 cd03029 GRX_hybridPRX5 Glutare 98.2 5.2E-06 1.1E-10 58.6 7.4 71 2-75 2-72 (72)
110 PF14834 GST_C_4: Glutathione 98.2 2.9E-05 6.2E-10 58.9 10.7 112 87-204 1-113 (117)
111 PRK10329 glutaredoxin-like pro 98.1 7.1E-06 1.5E-10 59.4 5.9 59 1-62 1-59 (81)
112 cd03027 GRX_DEP Glutaredoxin ( 98.1 1.3E-05 2.8E-10 56.7 6.1 68 3-72 3-70 (73)
113 TIGR02196 GlrX_YruB Glutaredox 98.0 1.8E-05 3.8E-10 55.4 6.4 70 3-74 2-73 (74)
114 cd02066 GRX_family Glutaredoxi 98.0 2.6E-05 5.6E-10 54.2 6.2 69 3-73 2-70 (72)
115 cd02976 NrdH NrdH-redoxin (Nrd 97.9 1.8E-05 3.9E-10 55.3 5.2 60 3-64 2-61 (73)
116 COG0695 GrxC Glutaredoxin and 97.9 4.1E-05 9E-10 55.2 6.2 66 1-67 1-67 (80)
117 TIGR02200 GlrX_actino Glutared 97.8 7.2E-05 1.6E-09 53.0 6.8 63 3-67 2-66 (77)
118 cd03418 GRX_GRXb_1_3_like Glut 97.8 7.3E-05 1.6E-09 52.9 6.2 71 3-75 2-73 (75)
119 TIGR02194 GlrX_NrdH Glutaredox 97.6 0.00013 2.8E-09 51.4 5.6 57 3-62 1-57 (72)
120 PRK11200 grxA glutaredoxin 1; 97.6 0.00025 5.4E-09 51.7 7.0 75 1-77 1-82 (85)
121 TIGR02181 GRX_bact Glutaredoxi 97.6 0.00023 4.9E-09 51.0 5.9 72 3-76 1-72 (79)
122 PF10568 Tom37: Outer mitochon 97.3 0.00077 1.7E-08 47.5 5.9 55 10-74 13-71 (72)
123 TIGR02183 GRXA Glutaredoxin, G 97.2 0.0019 4.1E-08 47.2 7.3 73 3-77 2-81 (86)
124 TIGR02189 GlrX-like_plant Glut 97.1 0.0028 6.1E-08 47.6 7.1 72 2-74 9-82 (99)
125 PF00462 Glutaredoxin: Glutare 97.1 0.00064 1.4E-08 45.9 3.3 57 3-61 1-57 (60)
126 PF04399 Glutaredoxin2_C: Glut 97.0 0.0084 1.8E-07 47.4 9.9 68 127-199 57-124 (132)
127 cd03419 GRX_GRXh_1_2_like Glut 96.8 0.0058 1.3E-07 43.7 7.1 73 3-76 2-76 (82)
128 TIGR02180 GRX_euk Glutaredoxin 96.5 0.018 4E-07 41.1 7.8 73 3-76 1-77 (84)
129 PHA03050 glutaredoxin; Provisi 96.5 0.0082 1.8E-07 45.8 6.1 69 3-72 15-88 (108)
130 cd03199 GST_C_GRX2 GST_C famil 96.1 0.02 4.3E-07 44.9 6.4 67 128-199 59-125 (128)
131 TIGR00365 monothiol glutaredox 96.1 0.025 5.4E-07 42.2 6.6 71 3-75 14-89 (97)
132 cd03028 GRX_PICOT_like Glutare 96.0 0.028 6E-07 41.3 6.6 71 3-75 10-85 (90)
133 PRK12759 bifunctional gluaredo 95.1 0.07 1.5E-06 50.7 7.3 69 1-72 1-79 (410)
134 COG1393 ArsC Arsenate reductas 94.8 0.039 8.4E-07 42.7 3.9 33 1-34 1-33 (117)
135 KOG1668 Elongation factor 1 be 94.7 0.04 8.7E-07 47.2 4.0 60 135-201 10-69 (231)
136 COG4545 Glutaredoxin-related p 94.7 0.11 2.5E-06 36.2 5.4 64 1-65 1-77 (85)
137 cd03031 GRX_GRX_like Glutaredo 94.6 0.13 2.7E-06 41.6 6.5 71 3-75 2-82 (147)
138 cd03032 ArsC_Spx Arsenate Redu 94.5 0.058 1.2E-06 41.6 4.3 31 3-34 2-32 (115)
139 PRK01655 spxA transcriptional 94.4 0.055 1.2E-06 42.8 4.0 32 3-35 2-33 (131)
140 cd02973 TRX_GRX_like Thioredox 93.7 0.27 5.8E-06 33.4 5.9 55 3-63 3-62 (67)
141 PRK13344 spxA transcriptional 93.6 0.11 2.3E-06 41.2 4.2 32 3-35 2-33 (132)
142 PRK10026 arsenate reductase; P 93.4 0.12 2.6E-06 41.3 4.2 33 1-34 1-34 (141)
143 cd03036 ArsC_like Arsenate Red 93.3 0.12 2.6E-06 39.5 4.0 32 3-35 1-32 (111)
144 PF09635 MetRS-N: MetRS-N bind 93.2 0.58 1.3E-05 36.1 7.3 49 14-78 12-62 (122)
145 PRK12559 transcriptional regul 93.0 0.16 3.4E-06 40.2 4.3 32 3-35 2-33 (131)
146 cd02977 ArsC_family Arsenate R 92.7 0.16 3.4E-06 38.4 3.8 32 3-35 1-32 (105)
147 PRK10853 putative reductase; P 92.4 0.18 4E-06 39.1 3.9 32 2-34 1-32 (118)
148 TIGR01617 arsC_related transcr 91.9 0.24 5.1E-06 38.3 3.9 31 3-34 1-31 (117)
149 PRK10824 glutaredoxin-4; Provi 91.6 0.7 1.5E-05 35.6 6.2 72 3-76 17-93 (115)
150 cd03035 ArsC_Yffb Arsenate Red 91.1 0.33 7.2E-06 36.7 4.0 31 3-34 1-31 (105)
151 TIGR00412 redox_disulf_2 small 91.1 1.1 2.4E-05 31.5 6.4 54 1-62 1-58 (76)
152 PF05768 DUF836: Glutaredoxin- 90.8 1.8 3.9E-05 30.9 7.4 54 3-61 2-57 (81)
153 cd03033 ArsC_15kD Arsenate Red 90.5 0.39 8.4E-06 36.9 3.9 31 3-34 2-32 (113)
154 TIGR01616 nitro_assoc nitrogen 87.9 0.77 1.7E-05 36.0 3.9 32 2-34 2-33 (126)
155 TIGR00411 redox_disulf_1 small 87.7 5.5 0.00012 27.8 8.1 55 3-61 3-61 (82)
156 cd03034 ArsC_ArsC Arsenate Red 87.1 0.93 2E-05 34.7 3.9 31 3-34 1-31 (112)
157 cd01659 TRX_superfamily Thiore 87.1 1.9 4E-05 27.4 5.1 55 4-61 2-61 (69)
158 TIGR00014 arsC arsenate reduct 87.0 0.97 2.1E-05 34.7 4.0 31 3-34 1-31 (114)
159 KOG1752 Glutaredoxin and relat 87.0 2.7 5.9E-05 31.7 6.3 71 3-76 16-90 (104)
160 PTZ00062 glutaredoxin; Provisi 86.9 2.3 5.1E-05 36.3 6.6 63 9-73 126-188 (204)
161 PF11801 Tom37_C: Tom37 C-term 85.5 1.9 4E-05 35.7 5.1 37 134-170 113-153 (168)
162 PHA02125 thioredoxin-like prot 85.0 2.8 6E-05 29.3 5.2 51 3-59 2-52 (75)
163 PF13192 Thioredoxin_3: Thiore 84.0 3.3 7.1E-05 29.0 5.2 54 1-62 1-58 (76)
164 cd03030 GRX_SH3BGR Glutaredoxi 82.9 6.5 0.00014 28.9 6.6 68 3-72 2-79 (92)
165 cd03026 AhpF_NTD_C TRX-GRX-lik 78.8 7 0.00015 28.4 5.6 54 3-62 16-74 (89)
166 PF04908 SH3BGR: SH3-binding, 78.6 4.2 9.1E-05 30.4 4.3 35 1-36 1-41 (99)
167 PF09868 DUF2095: Uncharacteri 77.1 1.2 2.5E-05 34.0 0.9 27 260-286 1-27 (128)
168 PF11417 Inhibitor_G39P: Loade 75.9 9.3 0.0002 26.7 5.2 63 66-162 5-69 (71)
169 PF11287 DUF3088: Protein of u 67.1 6.4 0.00014 30.0 2.9 66 11-79 24-108 (112)
170 PF03960 ArsC: ArsC family; I 67.0 6.7 0.00015 29.6 3.2 26 6-31 1-26 (110)
171 KOG0867 Glutathione S-transfer 49.5 2.5 5.4E-05 36.6 -2.1 78 129-210 91-169 (226)
172 COG0278 Glutaredoxin-related p 39.7 81 0.0018 23.6 4.8 62 8-75 27-93 (105)
173 PF00085 Thioredoxin: Thioredo 38.0 1.2E+02 0.0027 21.4 5.9 52 3-59 21-77 (103)
174 TIGR03143 AhpF_homolog putativ 37.2 74 0.0016 31.5 5.8 54 3-62 480-538 (555)
175 PF04564 U-box: U-box domain; 33.3 1.2E+02 0.0027 20.8 4.9 46 53-99 15-69 (73)
176 PRK15317 alkyl hydroperoxide r 33.2 33 0.00072 33.6 2.6 68 3-76 120-196 (517)
177 PF12569 NARP1: NMDA receptor- 32.7 10 0.00022 37.3 -1.1 23 181-203 356-378 (517)
178 TIGR03140 AhpF alkyl hydropero 31.3 38 0.00083 33.1 2.6 55 3-63 121-180 (515)
179 TIGR01295 PedC_BrcD bacterioci 30.9 2.4E+02 0.0053 21.5 6.7 58 4-62 28-100 (122)
180 PRK13808 adenylate kinase; Pro 28.7 4.5E+02 0.0098 24.3 8.9 30 1-30 1-30 (333)
181 cd02975 PfPDO_like_N Pyrococcu 28.7 1.7E+02 0.0036 22.0 5.3 52 4-59 26-81 (113)
182 PF07026 DUF1317: Protein of u 28.1 24 0.00053 23.4 0.4 19 293-311 13-31 (60)
183 COG1102 Cmk Cytidylate kinase 26.9 74 0.0016 26.3 3.1 30 1-30 1-30 (179)
184 TIGR02187 GlrX_arch Glutaredox 26.9 1.5E+02 0.0033 25.1 5.4 56 3-62 137-195 (215)
185 cd02963 TRX_DnaJ TRX domain, D 26.4 2E+02 0.0044 21.3 5.4 55 4-62 29-89 (111)
186 COG5374 Uncharacterized conser 26.0 27 0.00058 29.0 0.4 23 276-300 63-85 (192)
187 cd02947 TRX_family TRX family; 25.0 2.2E+02 0.0048 19.1 6.1 51 3-59 14-69 (93)
188 cd01766 Ufm1 Urm1-like ubiquit 24.3 1.1E+02 0.0024 21.4 3.1 22 10-31 25-46 (82)
189 PRK07764 DNA polymerase III su 23.8 6.8E+02 0.015 26.3 10.2 24 3-26 40-63 (824)
190 PF09849 DUF2076: Uncharacteri 23.0 5.1E+02 0.011 22.8 7.8 67 66-145 5-71 (247)
191 PF11120 DUF2636: Protein of u 22.4 93 0.002 21.1 2.4 46 156-201 1-46 (62)
192 COG0703 AroK Shikimate kinase 22.2 1.1E+02 0.0024 25.4 3.3 31 1-31 3-33 (172)
193 COG3019 Predicted metal-bindin 21.4 1.6E+02 0.0034 23.6 3.9 29 3-31 28-56 (149)
194 cd02978 KaiB_like KaiB-like fa 21.4 2.3E+02 0.0049 19.8 4.3 52 3-58 4-60 (72)
195 TIGR03493 cellullose_BcsF cell 21.3 1.3E+02 0.0028 20.3 2.8 44 156-199 1-44 (62)
196 cd02953 DsbDgamma DsbD gamma f 21.0 2.8E+02 0.0061 19.9 5.2 54 4-59 16-78 (104)
197 PRK00625 shikimate kinase; Pro 20.9 1.2E+02 0.0026 25.0 3.4 31 1-31 1-31 (173)
198 TIGR02187 GlrX_arch Glutaredox 20.4 3.5E+02 0.0075 22.8 6.3 56 3-62 23-87 (215)
No 1
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=2.3e-33 Score=242.48 Aligned_cols=204 Identities=25% Similarity=0.356 Sum_probs=166.8
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
|.++||+++.|+++++|+++|+++||+|+.+ .++.. .+...++|+.+||+|+||+|++++..|+||.||++||++.++
T Consensus 1 ~~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~-~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~ 79 (214)
T PLN02473 1 MVVKVYGQIKAANPQRVLLCFLEKGIEFEVI-HVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYA 79 (214)
T ss_pred CceEEecCCCCCchHHHHHHHHHcCCCceEE-EecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcC
Confidence 8899999999999999999999999999997 77653 356788999999999999999866699999999999999986
Q ss_pred CC--CCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhh-cc---ccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecC
Q 021466 80 DN--PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIP-RV---GFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVG 153 (312)
Q Consensus 80 ~~--~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvG 153 (312)
.. +|+|.++.+++++++|+.+..+.+.......+.. .. ...+.+....+.....+...++.||++|.+++|++|
T Consensus 80 ~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 159 (214)
T PLN02473 80 DQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGG 159 (214)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccC
Confidence 43 6999999999999999999987765543221111 11 112334556667778899999999999998899999
Q ss_pred CCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcc
Q 021466 154 HSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (312)
Q Consensus 154 e~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~ 205 (312)
+++|+|||++++.+.++........+.+.||+|.+|+++|.++|+|++++..
T Consensus 160 d~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 160 DEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 9999999999999876543222123357899999999999999999998754
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=1.1e-32 Score=237.79 Aligned_cols=191 Identities=18% Similarity=0.229 Sum_probs=160.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNP 82 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~ 82 (312)
++||+++.|++|++|+++|+++||+|+.+ .++. +...++|+++||.|+||+|++++..|+||.||++||+++++...
T Consensus 11 ~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~-~v~~--~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~ 87 (211)
T PRK09481 11 MTLFSGPTDIYSHQVRIVLAEKGVSVEIE-QVEK--DNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPP 87 (211)
T ss_pred eEEeCCCCChhHHHHHHHHHHCCCCCEEE-eCCc--ccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCC
Confidence 69999999999999999999999999997 7776 35678999999999999999866699999999999999998888
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHH
Q 021466 83 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADII 162 (312)
Q Consensus 83 L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~ 162 (312)
|+|.++.+++++++|+.++.+.+....... . ..+....+.....+...+..||++|.+++||+|+++|+|||+
T Consensus 88 l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~ 160 (211)
T PRK09481 88 LMPVYPVARGESRLMMHRIEKDWYSLMNKI----V---NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCY 160 (211)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----h---cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHH
Confidence 999999999999999998876543332211 1 112445567778899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCcccc-ccChhHHHHHHHHhcChhHHHHhcc
Q 021466 163 MTCNLTLGFSRILSKSFT-SEFPHIERYFWTMVNIPNFRKILGE 205 (312)
Q Consensus 163 l~~~l~~~~~~~~~~~~~-~~~P~l~rw~~~v~~~p~~~~~~~~ 205 (312)
+++.+.++....+ .+. ..||+|.+|+++|.++|+|++++.+
T Consensus 161 l~~~~~~~~~~~~--~~~~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 161 LAPLLWRLPVLGI--ELSGPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHhcCC--CCCCCCChhHHHHHHHHhccHHHHHHcCH
Confidence 9999876543322 222 5799999999999999999988754
No 3
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=1.2e-32 Score=238.09 Aligned_cols=205 Identities=24% Similarity=0.350 Sum_probs=165.9
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
|++|||+... +++++++++|.++|++|+.+ .++.. ++..+++|++.||+|+||+|++++.+|+||.+|++||+++++
T Consensus 1 ~~~~ly~~~~-~~~~rv~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~ 78 (215)
T PLN02395 1 MVLKVYGPAF-ASPKRALVTLIEKGVEFETV-PVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYR 78 (215)
T ss_pred CeEEEEcCCc-CcHHHHHHHHHHcCCCceEE-EeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcC
Confidence 8999999654 57999999999999999997 77652 356778999999999999999877799999999999999986
Q ss_pred C--CCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhc-cc---cccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecC
Q 021466 80 D--NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPR-VG---FAVYLPQAEEAAIASLKRALAALNTHLASNTYLVG 153 (312)
Q Consensus 80 ~--~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvG 153 (312)
. ..|+|.++.+++++++|+.+++..+.+.+...+... .+ ..+.+....+.....+.+.++.||++|.+++||+|
T Consensus 79 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G 158 (215)
T PLN02395 79 SQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAG 158 (215)
T ss_pred CCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 5 369999999999999999999877765553332211 11 12234455667788899999999999998999999
Q ss_pred CCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 154 HSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 154 e~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
+++|+|||++++.+.++.........+..||+|.+|+++|.++|.|++++....
T Consensus 159 ~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 159 DFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred CCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 999999999998877653221112235789999999999999999999987654
No 4
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=3.3e-32 Score=235.48 Aligned_cols=199 Identities=20% Similarity=0.266 Sum_probs=157.4
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcC----Cc---ccccHHHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETP----DG---PIFESNAIARYV 74 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~----~g---~l~eS~aI~~yL 74 (312)
+|||+.+ ++++++|+++|+++||+|+.+ .++.. ++...++|+++||.|+||+|+++ +| +|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLI-KVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEE-EecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7999876 799999999999999999997 77763 34557899999999999999972 34 699999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCC
Q 021466 75 ARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGH 154 (312)
Q Consensus 75 ~~~~~~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe 154 (312)
++.++ .+.|.++.+++++++|+.|..+.+.+.+.............+....+.....+...+..||++|.+++||+|+
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 157 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGE 157 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence 99864 4778889999999999999987776543221100001111234455667778999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccccc
Q 021466 155 SVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQ 208 (312)
Q Consensus 155 ~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~ 208 (312)
++|+|||++++.+.......++ ...||+|.+|+++|.++|+|+.++....+
T Consensus 158 ~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~~~~~~ 208 (215)
T PRK13972 158 NYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQALLKAQL 208 (215)
T ss_pred CCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHHHHhcc
Confidence 9999999998877544332222 47899999999999999999998765543
No 5
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.98 E-value=1.9e-31 Score=228.12 Aligned_cols=193 Identities=22% Similarity=0.377 Sum_probs=157.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCC--CCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV--TNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~--~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~ 79 (312)
|+||+...+ ++++++++|+++||+|+.+ .++... ....++|.++||.|+||+|++++| +|+||.||++||++.++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~-~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLV-SVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEE-EeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 489998755 7999999999999999997 777632 235689999999999999997777 99999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchH
Q 021466 80 DNPLL-GSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTL 158 (312)
Q Consensus 80 ~~~L~-g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~Tl 158 (312)
+..++ |.++.+++++++|+.++.+.+...+...+.. .............+.+.+..||++|.+++||+|+++|+
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ 153 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRP-----DTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTI 153 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCC-----CChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcH
Confidence 77766 5678899999999999987776544332211 11223345567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcc
Q 021466 159 ADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (312)
Q Consensus 159 ADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~ 205 (312)
|||++++.+.+......+ ...||+|.+|+++|.++|.|++++..
T Consensus 154 ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 154 ADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 999999998876443322 46799999999999999999998765
No 6
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.98 E-value=4.3e-31 Score=226.23 Aligned_cols=198 Identities=22% Similarity=0.246 Sum_probs=159.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~ 81 (312)
++||++..|+++++|+++|+++||+|+.+ .++. .....++...||.|+||+|++++| +|+||.+|++||++.++..
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~-~~~~--~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFV-NELP--YNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEE-ecCC--CCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 48999999999999999999999999997 6654 234567778899999999997677 9999999999999988777
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHH
Q 021466 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADI 161 (312)
Q Consensus 82 ~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi 161 (312)
.|+|.++.+++++++|+.++++.+......................+.....+...|..||++|.++. |+|+++|+|||
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi 156 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATI 156 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHH
Confidence 79999999999999999988766554433222221111122344556777889999999999998878 99999999999
Q ss_pred HHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhc
Q 021466 162 IMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (312)
Q Consensus 162 ~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~ 204 (312)
.+++.+.++.....+..+...||+|.+|+++|.++|+|+.+..
T Consensus 157 ~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 157 AIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 9999988764433333345689999999999999999998754
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=99.98 E-value=3.8e-31 Score=228.70 Aligned_cols=197 Identities=17% Similarity=0.120 Sum_probs=157.2
Q ss_pred eEEeecC--CCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 3 LVLHAGN--TNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 3 ~~Ly~~~--~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
++||+.+ .|++|++++++|+++||+|+.+ .++.. ++...++|+++||.|+||+|++++..|+||.||++||++.++
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~-~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~ 84 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELK-TVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFA 84 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEE-EeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcC
Confidence 5999975 6999999999999999999997 77764 345678999999999999999877799999999999999998
Q ss_pred CCC---CCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc-CCeecCCC
Q 021466 80 DNP---LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHS 155 (312)
Q Consensus 80 ~~~---L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~ 155 (312)
... |+|.++.+++++++|+.|+.+++.................+....+.....+.+.+..||++|.+ ..|++|+
T Consensus 85 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~- 163 (214)
T PRK15113 85 PPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE- 163 (214)
T ss_pred CCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-
Confidence 665 99999999999999999998776543221111001111122334456677889999999999975 4799996
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
+|+|||++++.+.++..... .+ .|+|.+|+++|.++|+|+.++...
T Consensus 164 ~TlADi~l~~~l~~~~~~~~--~~---~p~l~~~~~r~~~rp~~~~~~~~~ 209 (214)
T PRK15113 164 WCIADTDLALMLNRLVLHGD--EV---PERLADYATFQWQRASVQRWLALS 209 (214)
T ss_pred ccHHHHHHHHHHHHHHHcCC--CC---CHHHHHHHHHHhcCHHHHHHHHHh
Confidence 99999999999886643322 11 299999999999999999998764
No 8
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5e-31 Score=229.09 Aligned_cols=205 Identities=29% Similarity=0.423 Sum_probs=180.6
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccC-CCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEM-GVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~-~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
|.++||++..++++++++++++++|++|+.+ .++. .++...++|+++||.|+||+|++++-.|+||.||+.||++.+.
T Consensus 1 ~~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~-~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~ 79 (226)
T KOG0867|consen 1 MKLKLYGHLGSPPARAVLIAAKELGLEVELK-PVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYG 79 (226)
T ss_pred CCceEeecCCCcchHHHHHHHHHcCCceeEE-EeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC
Confidence 7899999999999999999999999999997 5654 5689999999999999999999984499999999999999885
Q ss_pred -CCC-CCCCCHHHHHHHHHHHHHHhccchhh--HHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCC
Q 021466 80 -DNP-LLGSSLIDSAHIEQWIDFSSLEIDTN--ILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHS 155 (312)
Q Consensus 80 -~~~-L~g~~~~e~a~v~~w~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~ 155 (312)
... |+|.+..+++.|++|+.+..+.+... ...++.+.....+.+..........+...++.+|.+|.++.|++|++
T Consensus 80 ~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~ 159 (226)
T KOG0867|consen 80 PLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQ 159 (226)
T ss_pred CCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCc
Confidence 334 99999999999999999999999888 45667775666777889999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
+|+||+.+.+.+..+.........+.+||++.||++++..+|.+.+.....
T Consensus 160 ~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~ 210 (226)
T KOG0867|consen 160 LTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANEKG 210 (226)
T ss_pred ccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHHHH
Confidence 999999999999877422223455789999999999999999988876543
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.97 E-value=1e-30 Score=225.11 Aligned_cols=197 Identities=22% Similarity=0.312 Sum_probs=158.3
Q ss_pred EEeecCCCccHHHHHHHHHHcCCCEEEEecccC-C-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCC
Q 021466 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEM-G-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADN 81 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~-~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~ 81 (312)
+||++..|++++++|++|.++||+|+.+ .++. . ++...+++.++||.|+||+|++++..|+||.+|++||++.++..
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~-~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYV-PVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEE-ecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 5898888999999999999999999997 7764 2 24456889999999999999985559999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHH----hhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcC--CeecCCC
Q 021466 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILR----WFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASN--TYLVGHS 155 (312)
Q Consensus 82 ~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~--tfLvGe~ 155 (312)
.|+|.+..+++++++|+.++.+++...... ++....+ .......+...+.+.+.|+.||++|.++ .||+|++
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 157 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLG--VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDT 157 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCC
Confidence 899999999999999999998766543221 1111111 1122334445667999999999999864 4999999
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
+|+|||.+++.+.++.....+ ...||+|.+|+++|.++|.|+.++.+.
T Consensus 158 ~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 158 PTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 999999999998876543222 468999999999999999999987654
No 10
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.7e-30 Score=224.08 Aligned_cols=194 Identities=29% Similarity=0.404 Sum_probs=167.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~ 81 (312)
++||+.+.||++.++++++.++|++|+.+ .++...+...++|+.+||+|+||+|++++| +|+||.||++||+++++..
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~-~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIV-LVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEE-EeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 48999999999999999999999999998 777643567899999999999999999999 8999999999999999876
Q ss_pred CCCCCCHH---HHHHHHHHHHHHhccchhhHHHhhhhccccccC-CHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCch
Q 021466 82 PLLGSSLI---DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY-LPQAEEAAIASLKRALAALNTHLASNTYLVGHSVT 157 (312)
Q Consensus 82 ~L~g~~~~---e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~T 157 (312)
.|+|.++. +++.+.+|+.++.+.+.+.+........+.... +....+.....+...+..+|..|.+++|++|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 69998874 889999999999999988887665544222222 46778888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHH
Q 021466 158 LADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFR 200 (312)
Q Consensus 158 lADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~ 200 (312)
+|||++++.+.++.....+ ...||+|.+|++++.++|.+.
T Consensus 160 iAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 9999999999875443222 268999999999999999965
No 11
>PRK11752 putative S-transferase; Provisional
Probab=99.97 E-value=1.4e-29 Score=225.27 Aligned_cols=200 Identities=22% Similarity=0.245 Sum_probs=155.5
Q ss_pred CeEEeecCCCccHHHHHHHHHHc------CCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCc----ccccHHHH
Q 021466 2 PLVLHAGNTNKNAFKALITAEYT------GVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDG----PIFESNAI 70 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~------gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g----~l~eS~aI 70 (312)
+++||+.+ |+++++|+++|+++ |++|+.+ .++.. .+...++|+++||.|+||+|++++| +|+||.||
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~-~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAW-LIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEE-EecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHH
Confidence 57999975 99999999999997 8999997 77653 3456789999999999999998753 79999999
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccC-CHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 021466 71 ARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY-LPQAEEAAIASLKRALAALNTHLASNT 149 (312)
Q Consensus 71 ~~yL~~~~~~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~Le~~L~~~t 149 (312)
++||++.++ .|+|.++.+++++++|+.|+...+ ......+.......+. .....+.....+...|..||++|.+++
T Consensus 122 l~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHE 198 (264)
T ss_pred HHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999876 499999999999999999987643 2121111111111111 133456667788999999999999999
Q ss_pred eecCCCchHHHHHHHHHHHHHHhhh-cC-cc--ccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 150 YLVGHSVTLADIIMTCNLTLGFSRI-LS-KS--FTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 150 fLvGe~~TlADi~l~~~l~~~~~~~-~~-~~--~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
||+|+++|+|||++++.+.++.... +. .. ....||+|.+|+++|.++|+|+++....
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 9999999999999998876553211 01 11 1467999999999999999999987653
No 12
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.8e-29 Score=210.74 Aligned_cols=196 Identities=22% Similarity=0.266 Sum_probs=167.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhC-CCCcccEEEcCCcccccHHHHHHHHhhccC-C
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMN-PIGKVPVLETPDGPIFESNAIARYVARLKA-D 80 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~-P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~-~ 80 (312)
++||++..||+++|++|+|+++||+|+.+ ..+. .+++++++.+| +.++||||+++++.|+||..|++||++.++ .
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~v-eedl--~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYV-EEDL--TNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEE-ecCC--CCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 68999999999999999999999999998 7766 45899999999 789999999999999999999999999999 4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhh-cCCeecCCCchHH
Q 021466 81 NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA-SNTYLVGHSVTLA 159 (312)
Q Consensus 81 ~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~-~~tfLvGe~~TlA 159 (312)
.+++|.++.+||+.+.|+++++..+.......+... .....+.+.+.+...|..||+.|. +.+|+.|+++++.
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~------~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~v 160 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAK------GGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFV 160 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhc------CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHh
Confidence 899999999999999999999976655544433322 235566777889999999999999 8899999999999
Q ss_pred HHHHHHHHHHHHhhhc--C---ccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 160 DIIMTCNLTLGFSRIL--S---KSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 160 Di~l~~~l~~~~~~~~--~---~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
||++++.+.+.+.... + ......+|.|.+|.+++.+++.|++++.+.+
T Consensus 161 Di~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e 213 (231)
T KOG0406|consen 161 DIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSE 213 (231)
T ss_pred hhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHH
Confidence 9999977776554321 1 1225689999999999999999999987764
No 13
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.5e-28 Score=196.30 Aligned_cols=199 Identities=20% Similarity=0.212 Sum_probs=170.9
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCC--CCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV--TNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD 80 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~--~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~ 80 (312)
..||.|..|.+++|||++|+++||+|+.. .+++-. ...+.+|.+.||.++||+|+.++-+|+||.||++||++.+|+
T Consensus 6 piLYSYWrSSCswRVRiALaLK~iDYey~-PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ 84 (217)
T KOG0868|consen 6 PILYSYWRSSCSWRVRIALALKGIDYEYK-PVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPD 84 (217)
T ss_pred chhhhhhcccchHHHHHHHHHcCCCccee-ehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCC
Confidence 48999989999999999999999999997 666522 344569999999999999999777999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc--CCeecCCCchH
Q 021466 81 NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTL 158 (312)
Q Consensus 81 ~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~~Tl 158 (312)
.+|+|.++..||.+++....+.+.+.+.-...++..++....... ...+...+.+.+..||..|.. +.|.||+.+|+
T Consensus 85 ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~-~~W~q~~ItkGF~ALEklL~~~aGkycvGDevti 163 (217)
T KOG0868|consen 85 PPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG-DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTI 163 (217)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh-hHHHHHHHHHhHHHHHHHHHHccCCcccCceeeh
Confidence 999999999999999999999999998887777766653322222 556667788999999999976 58999999999
Q ss_pred HHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 159 ADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 159 ADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
||+++.+.+..+...-++ ...||-|.|..+++...|.|+..+.+.
T Consensus 164 ADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 164 ADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred hhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 999999999877444444 578999999999999999999887664
No 14
>PRK10387 glutaredoxin 2; Provisional
Probab=99.95 E-value=7.1e-27 Score=201.18 Aligned_cols=185 Identities=19% Similarity=0.171 Sum_probs=137.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~ 81 (312)
++||++..||+|++++++|+++||+|+.+ .++.. . .......+|.|+||+|+.++| .|+||.||++||+++++..
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~-~~~~~-~--~~~~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELI-VLAND-D--EATPIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEE-EcCCC-c--hhhHHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 58999999999999999999999999997 66442 1 122367899999999965566 9999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCH---------------------HHHHHHHHHHHHHHHH
Q 021466 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLP---------------------QAEEAAIASLKRALAA 140 (312)
Q Consensus 82 ~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~L~~ 140 (312)
.+.+ .+++.+++|+.++...+...+...+....-...... ...+.....+.+.|..
T Consensus 77 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (210)
T PRK10387 77 LLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRA 153 (210)
T ss_pred cCCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 4432 257889999998866554443222211000000000 0113556789999999
Q ss_pred HHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 141 Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
||++|++ +||+|+++|+|||++++.+.++.... + ...+|+|.+|+++|.++|++
T Consensus 154 le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~-~---~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 154 LDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK-G---IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec-C---CCCCHHHHHHHHHHHHHhCC
Confidence 9999987 99999999999999999998764421 1 13469999999999999876
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=99.95 E-value=6.6e-27 Score=202.01 Aligned_cols=182 Identities=24% Similarity=0.302 Sum_probs=139.5
Q ss_pred cCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCCCCCCC
Q 021466 8 GNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSS 87 (312)
Q Consensus 8 ~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~g~~ 87 (312)
+..||+|++++++|+++|++|+.+ .+++. .+.++|+++||.|+||+|++++++|+||.+|++||+++++...+. +
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~-~v~~~--~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~--~ 91 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIH-LINLS--DKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLK--T 91 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEE-EeCcc--cCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCC--C
Confidence 345999999999999999999997 77763 467799999999999999988779999999999999998866553 5
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhh--cCCeecCCCchHHHHHHHH
Q 021466 88 LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMTC 165 (312)
Q Consensus 88 ~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~~TlADi~l~~ 165 (312)
+.+++.+.+++.. .+..+... . ...+.....+.+.|..||++|. +++||+|+++|+|||++++
T Consensus 92 ~~~~a~i~~~~~~-------~~~~~~~~---~-----~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~ 156 (213)
T PLN02378 92 PAEFASVGSNIFG-------TFGTFLKS---K-----DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAP 156 (213)
T ss_pred HHHHHHHHHHHHH-------HHHHHHhc---C-----ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHH
Confidence 6777776654321 11111111 0 0112344577788999999998 4799999999999999999
Q ss_pred HHHHHHhh---hcCccccccChhHHHHHHHHhcChhHHHHhcccccc
Q 021466 166 NLTLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQA 209 (312)
Q Consensus 166 ~l~~~~~~---~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~ 209 (312)
.+.++... .........||+|.+|+++|.++|+++.++....++
T Consensus 157 ~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~ 203 (213)
T PLN02378 157 KLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYV 203 (213)
T ss_pred HHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHH
Confidence 98764321 111122468999999999999999999888766544
No 16
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.95 E-value=5.7e-26 Score=195.05 Aligned_cols=186 Identities=20% Similarity=0.256 Sum_probs=136.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHH--------HhCCCCcccEEEcCCcccccHHHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFL--------KMNPIGKVPVLETPDGPIFESNAIARYV 74 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~--------~~~P~gkvP~L~~~~g~l~eS~aI~~yL 74 (312)
++||+++.++++.+||++|+++|++|+.+ .+.. .. ++++ ..||+|+||+|++++.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~-~~~~---~~-~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDK-RFGE---NG-DAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEE-eccc---cc-hHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 79999999999999999999999999997 5532 12 2333 3799999999998666999999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHhc-cchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcC--Cee
Q 021466 75 ARLKADNPLLGSSLIDSAHIEQWIDFSSL-EIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASN--TYL 151 (312)
Q Consensus 75 ~~~~~~~~L~g~~~~e~a~v~~w~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~--tfL 151 (312)
++.++ +.|.+..++ +..|+.+... ++...+.... .......+...+.+.+.+..||++|.++ +||
T Consensus 80 a~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l 147 (205)
T PTZ00057 80 SKKYK---ICGESELNE--FYADMIFCGVQDIHYKFNNTN-------LFKQNETTFLNEELPKWSGYFENILKKNHCNYF 147 (205)
T ss_pred HHHcC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 99875 445554444 3444433321 2221111100 0112233455678899999999999764 799
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 152 VGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 152 vGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
+|+++|+||+++++.+.++... .+ .....||+|.+|+++|.++|.|++++.+..
T Consensus 148 ~Gd~~T~AD~~l~~~~~~~~~~-~~-~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 148 VGDNLTYADLAVFNLYDDIETK-YP-NSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred eCCcccHHHHHHHHHHHHHHHh-Ch-hhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 9999999999999988765321 22 225789999999999999999999987653
No 17
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.94 E-value=2.4e-25 Score=193.51 Aligned_cols=184 Identities=16% Similarity=0.171 Sum_probs=140.6
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCC---CCCCC
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD---NPLLG 85 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~---~~L~g 85 (312)
..||+|++++++|.++||+|+.+ .+++. .++++|+++||.|+||||++++..|+||.+|++||++.++. +.+.+
T Consensus 17 ~~cp~~~rv~i~L~ekgi~~e~~-~vd~~--~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p 93 (236)
T TIGR00862 17 GNCPFSQRLFMILWLKGVVFNVT-TVDLK--RKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSP 93 (236)
T ss_pred CCCHhHHHHHHHHHHcCCCcEEE-EECCC--CCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCC
Confidence 45899999999999999999997 77763 45799999999999999998666999999999999998864 34556
Q ss_pred CCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhh------------------c
Q 021466 86 SSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA------------------S 147 (312)
Q Consensus 86 ~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~------------------~ 147 (312)
.++..++... ++...+..++ .+ .+....+.....+.+.++.||++|. +
T Consensus 94 ~~~~~~~~~~--------~l~~~~~~~~---~~---~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~ 159 (236)
T TIGR00862 94 KHPESNTAGL--------DIFAKFSAYI---KN---SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSR 159 (236)
T ss_pred CCHHHHHHHH--------HHHHHHHHHH---Hc---CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccC
Confidence 6655544321 1222222221 11 1233344555668999999999997 5
Q ss_pred CCeecCCCchHHHHHHHHHHHHHHhh---hcCccccccChhHHHHHHHHhcChhHHHHhcccccc
Q 021466 148 NTYLVGHSVTLADIIMTCNLTLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQA 209 (312)
Q Consensus 148 ~tfLvGe~~TlADi~l~~~l~~~~~~---~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~ 209 (312)
+.||.|+++|+|||++++.+.++... ..+-.+.+.||+|.+|++++.++++|+.++.....+
T Consensus 160 ~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i 224 (236)
T TIGR00862 160 RKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEI 224 (236)
T ss_pred CCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHH
Confidence 79999999999999999999876532 234444689999999999999999999987665443
No 18
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.94 E-value=2.3e-25 Score=197.60 Aligned_cols=179 Identities=19% Similarity=0.265 Sum_probs=138.8
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCCCCCCCH
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSL 88 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~g~~~ 88 (312)
..||+|++++++|+++||+|+++ .++. ....++|+++||.|+||+|+++++.|+||.+|++||++.++...|. ++
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~-~vdl--~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~ 145 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMK-LVDL--TNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TP 145 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEE-EeCc--CcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CH
Confidence 34999999999999999999997 7766 3567899999999999999998779999999999999999876663 57
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc-CCeecCCCchHHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~~TlADi~l~~~l 167 (312)
.+++.+++|+-.. +..++. .. +. .+.....+...+..||++|.+ +.||+|+++|+|||++++.+
T Consensus 146 ~era~i~~~l~~~-------~~~~~~---~~---~~--~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L 210 (265)
T PLN02817 146 PEKASVGSKIFST-------FIGFLK---SK---DP--GDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKL 210 (265)
T ss_pred HHHHHHHHHHHHH-------HHHHhc---cC---Cc--chHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHH
Confidence 8899988875321 111111 10 11 112235677889999999984 69999999999999999998
Q ss_pred HHHHhh---hcCccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 168 TLGFSR---ILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 168 ~~~~~~---~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
.++... ..+-...+.||+|.+|+++|.++|+|+.+....+
T Consensus 211 ~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~ 253 (265)
T PLN02817 211 YHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPE 253 (265)
T ss_pred HHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHH
Confidence 765321 1121234789999999999999999999876543
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=8e-25 Score=184.73 Aligned_cols=198 Identities=24% Similarity=0.272 Sum_probs=158.6
Q ss_pred CC-eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 1 Ms-~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
|+ ++|+|++..+++..+|+++++.|++|+.. .+..+. .+.......|+|++|+|..++..|.+|.||+|||++++
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~-r~~~~~--~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~- 76 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDK-RITMED--AWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKF- 76 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCccee-eecccc--chhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHh-
Confidence 54 79999999999999999999999999997 887632 15666667999999999998669999999999999965
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhh-hccccccCCHHHHH-HHHHHHHHHHHHHHHhhh--cCCeecCCC
Q 021466 80 DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFI-PRVGFAVYLPQAEE-AAIASLKRALAALNTHLA--SNTYLVGHS 155 (312)
Q Consensus 80 ~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~~L~~Le~~L~--~~tfLvGe~ 155 (312)
+|.|+|+.|+++++...+...+-....+...+. ...|. .+...+ .........+..+++.|. .+.||||++
T Consensus 77 --gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~---~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~ 151 (206)
T KOG1695|consen 77 --GLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGK---SEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDK 151 (206)
T ss_pred --CcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhcc---chhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCc
Confidence 599999999999999988887544443333322 22221 111112 455677888999999998 457999999
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccccc
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQ 208 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~ 208 (312)
+|+||++++..+..+... +.+.....+|+|..+.++|.++|.+++++.....
T Consensus 152 lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 152 LTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred ccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 999999999999876554 5566677899999999999999999999877643
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.92 E-value=4.3e-24 Score=183.85 Aligned_cols=182 Identities=18% Similarity=0.217 Sum_probs=132.2
Q ss_pred EEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCCC
Q 021466 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNP 82 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~~ 82 (312)
+||++..||+|++||++|.++|++|+.+ .+... + .....+.||.|+||+|+.++| .|+||.+|++||+++++...
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~-~~~~~-~--~~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKH-VLLND-D--EETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEE-ECCCC-c--chhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 6899999999999999999999999987 55432 1 223478999999999985566 99999999999999987643
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccC-----------CHHH-----------HHHHHHHHHHHHHH
Q 021466 83 LLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVY-----------LPQA-----------EEAAIASLKRALAA 140 (312)
Q Consensus 83 L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~-----------~~~~~~~l~~~L~~ 140 (312)
+.|. +++++++|+.++...+...+...+.... .... .+.. .+.....+...|+.
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 152 (209)
T TIGR02182 77 LTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSD-LPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEE 152 (209)
T ss_pred CCCC---ChHHHHHHHHHHHHHhhhhhccccccCC-CcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHH
Confidence 3332 4677889988876655333322111100 0000 0000 13456778999999
Q ss_pred HHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccCh-hHHHHHHHHhcChhH
Q 021466 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFP-HIERYFWTMVNIPNF 199 (312)
Q Consensus 141 Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P-~l~rw~~~v~~~p~~ 199 (312)
||++|.+++|++| ++|+|||++++.+.++.... + ..+| +|.+|+++|.+++.+
T Consensus 153 le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 153 LDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 9999999999965 59999999999988654321 1 1356 999999999988765
No 21
>PLN02907 glutamate-tRNA ligase
Probab=99.92 E-value=7e-24 Score=209.62 Aligned_cols=158 Identities=23% Similarity=0.333 Sum_probs=132.6
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccC
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~ 79 (312)
|+++||+.+.+ .+.+++++|+++|++|+.+ . .+|.|+||+|++++| .|+||.||++||++.++
T Consensus 1 ~~~kLy~~~~S-~~~~v~~~L~~lgv~~e~~-~--------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p 64 (722)
T PLN02907 1 MEAKLSFPPDS-PPLAVIAAAKVAGVPLTID-P--------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSAS 64 (722)
T ss_pred CeEEEEECCCC-ChHHHHHHHHHcCCCcEEe-e--------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCC
Confidence 89999998765 5788999999999999996 2 258999999998777 99999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHH
Q 021466 80 DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLA 159 (312)
Q Consensus 80 ~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlA 159 (312)
...|+|.++.+++++++|+.|+..... ...+...++.||.+|..++||+|+++|+|
T Consensus 65 ~~~L~p~d~~erAqV~qWL~~~~~~~~------------------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLA 120 (722)
T PLN02907 65 LPGFYGQDAFESSQVDEWLDYAPTFSS------------------------GSEFENACEYVDGYLASRTFLVGYSLTIA 120 (722)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhhccc------------------------HHHHHHHHHHHHHHhccCCeecCCCCCHH
Confidence 878999999999999999999864210 01356778999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChh
Q 021466 160 DIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPN 198 (312)
Q Consensus 160 Di~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~ 198 (312)
||++++.+...............||||.||+++|.++|+
T Consensus 121 DIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 121 DIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 999999886542222222235789999999999999999
No 22
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.87 E-value=1.4e-21 Score=165.22 Aligned_cols=204 Identities=23% Similarity=0.277 Sum_probs=149.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCC-
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD- 80 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~- 80 (312)
+.||.++.|..+++||++++++||+++-. +|+.. ++...++|...||.|.||||++++.+|+++..|++|+.+.+.+
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y-~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ge 105 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEY-DVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGE 105 (325)
T ss_pred ceeeecCcccccceeeeehhhccccccee-eccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhccc
Confidence 68999999999999999999999999997 77763 5788999999999999999999999999999999999997643
Q ss_pred CCCCCC-CHHHHHHHHHHHH-------------------------------------HHhccchhhHH-------Hhhhh
Q 021466 81 NPLLGS-SLIDSAHIEQWID-------------------------------------FSSLEIDTNIL-------RWFIP 115 (312)
Q Consensus 81 ~~L~g~-~~~e~a~v~~w~~-------------------------------------~~~~~l~~~~~-------~~~~~ 115 (312)
..|.|. +..+..++.++-. -.++.+..... .....
T Consensus 106 r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~a 185 (325)
T KOG4420|consen 106 RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLA 185 (325)
T ss_pred ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHH
Confidence 345552 1111112211111 11111100000 00000
Q ss_pred c------cccccCCHHHHHHHHHHHHHHHHHHHHhhhc----CCeecCCCchHHHHHHHHHHHHHHhhhcCccccc--cC
Q 021466 116 R------VGFAVYLPQAEEAAIASLKRALAALNTHLAS----NTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTS--EF 183 (312)
Q Consensus 116 ~------~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~----~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~--~~ 183 (312)
. .-...-+....+.....+...|..+|+.|.. .+||+|+.+|+|||.+...|+++....+...++. +.
T Consensus 186 kqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsr 265 (325)
T KOG4420|consen 186 KQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSR 265 (325)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCC
Confidence 0 0000112334455666778888888888887 5899999999999999999999988877766655 78
Q ss_pred hhHHHHHHHHhcChhHHHHhcccc
Q 021466 184 PHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 184 P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
|||..||.++..+++|++++++.-
T Consensus 266 pnle~Yf~rvrrR~sf~kvlg~~f 289 (325)
T KOG4420|consen 266 PNLESYFERVRRRFSFRKVLGDIF 289 (325)
T ss_pred ccHHHHHHHHHhhhHHHHhhhhHH
Confidence 999999999999999999999863
No 23
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.72 E-value=1.1e-16 Score=132.14 Aligned_cols=185 Identities=19% Similarity=0.213 Sum_probs=141.9
Q ss_pred CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCCCCCCCHH
Q 021466 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLI 89 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~g~~~~ 89 (312)
.||+|+++.|.|...|++|+++ .|++ ..++++|++++|.|++|+|..++..++||..|-++|.+.++.+.+.--.+.
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vt-tVd~--~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~ 96 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVT-TVDL--SRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPP 96 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEE-Eeec--CCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCH
Confidence 4899999999999999999997 8877 357889999999999999999888999999999999999886544322233
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc---CCeecCCCchHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS---NTYLVGHSVTLADIIMTCN 166 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~---~tfLvGe~~TlADi~l~~~ 166 (312)
|.+. +.+.|+..+..++... .+..-+.....+...|..||++|.+ +.||.|+++|+||+.+.+-
T Consensus 97 E~as-------ag~diF~kF~~fi~ks------k~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPK 163 (221)
T KOG1422|consen 97 ESAS-------AGSDIFAKFSAFIKKS------KDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPK 163 (221)
T ss_pred HHHh-------hHHHHHHHHHHHHhCc------hhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchh
Confidence 3332 2334444444443211 1112233445677788999999986 7999999999999999999
Q ss_pred HHHHHh---hhcCccccccChhHHHHHHHHhcChhHHHHhccccccc
Q 021466 167 LTLGFS---RILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (312)
Q Consensus 167 l~~~~~---~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~~ 210 (312)
|+.+.- +..+-++.+.+++|.||+..+.++..|.......+.+.
T Consensus 164 L~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~ 210 (221)
T KOG1422|consen 164 LHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEII 210 (221)
T ss_pred HHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHH
Confidence 886432 33455667889999999999999999998877766655
No 24
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.68 E-value=4.3e-16 Score=122.44 Aligned_cols=121 Identities=38% Similarity=0.752 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~ 169 (312)
+++++++|+.|+.+.+.+.+..++.+..+..+.+....+.....+.+.|+.||++|..++||+|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 37889999999999999988776665554445566778888999999999999999999999999999999999999988
Q ss_pred HHhhhcCccccccChhHHHHHHHHhcChhHHHHhccccccc
Q 021466 170 GFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (312)
Q Consensus 170 ~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~~ 210 (312)
+.....+..+...+|+|.+|++++.++|.|++++.+.++|+
T Consensus 81 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~ 121 (123)
T cd03181 81 GFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVKLCE 121 (123)
T ss_pred HHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCCcCC
Confidence 75554443335689999999999999999999999988876
No 25
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.66 E-value=4.6e-16 Score=111.62 Aligned_cols=72 Identities=53% Similarity=0.802 Sum_probs=66.1
Q ss_pred EEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhh
Q 021466 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~ 76 (312)
+||+++.|+++++++++|+++|++|+.+ .++...+...++|.++||.|+||+|++++| .|+||.||++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~-~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIV-DFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEE-ecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 7999999999999999999999999998 887754467899999999999999998767 99999999999976
No 26
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.63 E-value=2.3e-15 Score=129.00 Aligned_cols=187 Identities=18% Similarity=0.152 Sum_probs=127.4
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhc-----
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL----- 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~----- 77 (312)
++||.|..||+|.+||.+|.|.||+|+++ +|+. -...-.+-+.+.+||+|...+..+.||.+|+.-|+..
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VV-EVnp----V~r~eIk~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVV-EVNP----VLRQEIKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEE-Eecc----hhhhhccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 58999999999999999999999999998 7754 2223334567899999998644899999999887442
Q ss_pred ---------cCCCC------------------CC-----CCCHHHHHHHHHHHHHHhccchhhHHHhhhhccc-------
Q 021466 78 ---------KADNP------------------LL-----GSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVG------- 118 (312)
Q Consensus 78 ---------~~~~~------------------L~-----g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~------- 118 (312)
||... ++ +.+-+.+..-+.|.+|+++.|...+..-++...+
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFe 245 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFE 245 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHH
Confidence 22100 00 1122334456789999988877766443322211
Q ss_pred ------c----ccCC----------------------HHHHHHHHHHHHHHHHHHHHhh-hcCCeecCCCchHHHHHHHH
Q 021466 119 ------F----AVYL----------------------PQAEEAAIASLKRALAALNTHL-ASNTYLVGHSVTLADIIMTC 165 (312)
Q Consensus 119 ------~----~~~~----------------------~~~~~~~~~~l~~~L~~Le~~L-~~~tfLvGe~~TlADi~l~~ 165 (312)
. .+.. +..+...++.+.+.++.+-..| .+++||.|.++++||+.+|+
T Consensus 246 wf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfG 325 (370)
T KOG3029|consen 246 WFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFG 325 (370)
T ss_pred HHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhh
Confidence 1 0000 1222334556666777666677 57899999999999999999
Q ss_pred HHHHHHhhhcCccccccChhHHHHHHHHhc
Q 021466 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~ 195 (312)
.|..+.......+. -...+|..||-+|.+
T Consensus 326 vl~sm~gc~afkd~-~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 326 VLRSMEGCQAFKDC-LQNTSIGEWYYRMEA 354 (370)
T ss_pred hhhHhhhhhHHHHH-HhcchHHHHHHHHHH
Confidence 99876554333332 245799999999875
No 27
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.63 E-value=3.4e-15 Score=116.20 Aligned_cols=112 Identities=19% Similarity=0.157 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHH
Q 021466 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCN 166 (312)
Q Consensus 87 ~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~ 166 (312)
++..+++|++|+++...++.+.+..+.+...- ++...+.....+.+.+..||++|++++|++|+++|+|||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~ 78 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRY----PEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPF 78 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhc----CcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHH
Confidence 67889999999999999999998887765432 12246778889999999999999999999999999999999988
Q ss_pred HHHHHhhhcCccccccChhHHHHHHHHhcChhHHHH
Q 021466 167 LTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKI 202 (312)
Q Consensus 167 l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~ 202 (312)
+.++............||+|.+|+++|.++|+|+++
T Consensus 79 l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 79 VRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 765432211111147899999999999999999875
No 28
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.62 E-value=1.2e-15 Score=109.48 Aligned_cols=74 Identities=34% Similarity=0.433 Sum_probs=66.3
Q ss_pred EeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCC
Q 021466 5 LHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADN 81 (312)
Q Consensus 5 Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~ 81 (312)
||++..||+|+++|++|+++||+|+.+ .++. ....+++...+|.|+||+|++++..|+||.+|++||++++++.
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~-~v~~--~~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELV-PVDP--EEKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEE-EEBT--TSTSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEe-ccCc--ccchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 899999999999999999999999998 7765 3458899999999999999966449999999999999988764
No 29
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=99.62 E-value=3.5e-17 Score=122.39 Aligned_cols=38 Identities=63% Similarity=0.945 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccCCCCCCcccccccccc
Q 021466 261 KPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKVRGS 300 (312)
Q Consensus 261 k~k~pl~~l~~~~f~ld~~kr~ysn~~~~~~~~~~~~~~~ 300 (312)
|+|||||+||||+|+||+|||+|||+|| |++|||||-.
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~--~~~a~p~Fwe 38 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDT--RTVAMPWFWE 38 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-G--GGTHHHHHHS
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCc--hhhHHHHHHH
Confidence 6899999999999999999999999999 9999999853
No 30
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.62 E-value=1.6e-15 Score=108.28 Aligned_cols=73 Identities=29% Similarity=0.358 Sum_probs=65.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
++||+++.|++|++++++|+++|++|+.+ .++.. ++...++|.+.||.|+||+|++++..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLK-EVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEE-EecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 58999999999999999999999999997 77653 345678999999999999999875599999999999974
No 31
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.62 E-value=1.7e-15 Score=108.04 Aligned_cols=72 Identities=26% Similarity=0.408 Sum_probs=63.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||+++.|++|++++++|+++|++|+.+ .++.. .+...++|.++||.|+||+|++++..|+||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~-~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEY-DVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEE-EecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999997 77653 34567899999999999999976559999999999984
No 32
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.62 E-value=1.3e-15 Score=109.53 Aligned_cols=73 Identities=44% Similarity=0.645 Sum_probs=60.5
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCC-CcccEEEcCCc-ccccHHHHHHHHhh
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPI-GKVPVLETPDG-PIFESNAIARYVAR 76 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~-gkvP~L~~~~g-~l~eS~aI~~yL~~ 76 (312)
|+++||.++ +|+.++|++|+++|++|+.+ .+++. ++.+.++|.+.+|. |+||+|++++| .|+||.||++||++
T Consensus 1 ~~l~l~~~~--~~~~~~r~~l~~~gv~~e~~-~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGR--GRSERIRLLLAEKGVEYEDV-RVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSS--TTTHHHHHHHHHTT--EEEE-EEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCC--CchHHHHHHHHHhcccCceE-EEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 555666654 49999999999999999997 88763 34556999999999 99999999956 99999999999975
No 33
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.61 E-value=2.8e-15 Score=109.14 Aligned_cols=75 Identities=35% Similarity=0.538 Sum_probs=66.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCC--c-ccccHHHHHHHHhhcc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPD--G-PIFESNAIARYVARLK 78 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~--g-~l~eS~aI~~yL~~~~ 78 (312)
++||+++. ++|++++++|+++|++|+.+ .++.. .+...++|.+.||.|+||+|++++ | .|+||.+|++||++.+
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIH-PVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEE-EecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 69999886 99999999999999999997 77653 345678999999999999999985 6 9999999999999976
Q ss_pred C
Q 021466 79 A 79 (312)
Q Consensus 79 ~ 79 (312)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 4
No 34
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.60 E-value=3.4e-15 Score=106.31 Aligned_cols=72 Identities=26% Similarity=0.471 Sum_probs=65.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~ 77 (312)
++||+.+.||+|++++++++++|++|+.+ .++. ....+++.+.||.|+||+|++++..|+||.+|++||+++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~-~v~~--~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 72 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEII-DVDP--DNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDER 72 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEE-EcCC--CCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 58999999999999999999999999997 6665 345689999999999999998777999999999999875
No 35
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.60 E-value=1.1e-14 Score=113.30 Aligned_cols=111 Identities=24% Similarity=0.276 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHhhhhcccc------ccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHH
Q 021466 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGF------AVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLAD 160 (312)
Q Consensus 87 ~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlAD 160 (312)
++.+++++++|+.|+++.+.+.+...+...... ...+....+.....+...|..||++|.+++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 467899999999999999888877666543322 23556778888899999999999999989999999999999
Q ss_pred HHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 161 IIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 161 i~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
|++++.+.++... +..+...||+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~--~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVV--KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhc--CCCCccccHHHHHHHHHHHhccCC
Confidence 9999999876543 333457899999999999999864
No 36
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.60 E-value=6.6e-15 Score=113.86 Aligned_cols=111 Identities=24% Similarity=0.369 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccc--cCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFA--VYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l 167 (312)
+++++++|+.|..+.+.+.+..++....... ...+...+.....+.+.++.||++|.+++||+|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 5799999999999999988765554432111 11245566778889999999999999899999999999999999998
Q ss_pred HHHHhhhcCccccccChhHHHHHHHHhcChhHHHHh
Q 021466 168 TLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
.++.....+ ...||+|.+|+++|.++|.|++++
T Consensus 82 ~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 765433222 457999999999999999998763
No 37
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.59 E-value=3.4e-15 Score=107.64 Aligned_cols=73 Identities=23% Similarity=0.215 Sum_probs=63.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcC-Cc-ccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETP-DG-PIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~-~g-~l~eS~aI~~yL~~~ 77 (312)
++||+++.||+|++++++|.++||+|+.+ .+.. .+...+++.+.||.|+||+|+++ +| .|+||.+|++||+++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~-~v~~-~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~ 76 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILY-PCPK-GSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKT 76 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEE-ECCC-ChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHh
Confidence 79999999999999999999999999997 6643 22345789999999999999985 45 999999999999875
No 38
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.59 E-value=5.1e-15 Score=114.53 Aligned_cols=111 Identities=20% Similarity=0.210 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhc-cccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPR-VGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~ 168 (312)
+++++++|+.|.++.+.+.+..++... .+ ...++...+.....+...++.||++|++++|++|+++|+|||++++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~ 79 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYA-PEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVR 79 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhC-CCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHH
Confidence 478999999999999998876553322 22 2344566778889999999999999999999999999999999999988
Q ss_pred HHHhhhcCccccccChhHHHHHHHHhcChhHHHHh
Q 021466 169 LGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
+......+ +...||+|.+|+++|.++|+|+.++
T Consensus 80 ~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 80 RLEWIGID--DLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHhcccc--chhhchHHHHHHHHHhhCHHHHHhc
Confidence 76544322 3578999999999999999999864
No 39
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.59 E-value=4.8e-15 Score=105.12 Aligned_cols=68 Identities=35% Similarity=0.458 Sum_probs=62.1
Q ss_pred EEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHH
Q 021466 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYV 74 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL 74 (312)
+||++..||+|++++++|+++|++|+.+ .++.. ...++|.+.||.|+||+|+++|| .|+||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~-~v~~~--~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELR-EVELK--NKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEE-EeCCC--CCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999999999999999999997 77663 45689999999999999999877 999999999997
No 40
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.58 E-value=8.5e-15 Score=105.15 Aligned_cols=73 Identities=38% Similarity=0.582 Sum_probs=65.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
++||+++.|++|++++++|+++|++|+.+ .++.. .+...++|.+.||.|+||+|++++..|+||.||++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELV-PVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEE-EeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhh
Confidence 69999999999999999999999999997 77653 245678999999999999999875599999999999986
No 41
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.58 E-value=7.9e-15 Score=105.66 Aligned_cols=75 Identities=33% Similarity=0.489 Sum_probs=65.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~ 79 (312)
++||+++.+ ++++++++|+++|++|+.+ .++.. ++...++|.+.||.|+||+|++++| .|+||.+|++||++.+|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELV-RVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEE-EEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 489998865 6899999999999999997 67653 3456899999999999999999867 99999999999998754
No 42
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.58 E-value=8.2e-15 Score=105.31 Aligned_cols=74 Identities=32% Similarity=0.399 Sum_probs=65.2
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCC-CCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV-TNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~-~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~ 77 (312)
++||+++.|+++++++++|+++|++|+.+ .++... +...+++.+.||.|+||+|++++..|+||.||++||++.
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~-~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~ 75 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEEC-PIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARK 75 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEE-EecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 48999999999999999999999999997 777632 345678999999999999998666999999999999875
No 43
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.58 E-value=2e-14 Score=112.30 Aligned_cols=110 Identities=25% Similarity=0.369 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhHHHhh-hhccccc-------cCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCc
Q 021466 85 GSSLIDSAHIEQWIDFSSLEIDTNILRWF-IPRVGFA-------VYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSV 156 (312)
Q Consensus 85 g~~~~e~a~v~~w~~~~~~~l~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~ 156 (312)
|.++.+++++++|+.|..+.+.+.+...+ ....+.. ..+....+.....+...++.||++|.+++||+|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 45788999999999999999988875433 3222221 123455566777899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcCh
Q 021466 157 TLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIP 197 (312)
Q Consensus 157 TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p 197 (312)
|+|||++++.+.++..... ....||+|.+|+++|.++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 9999999998887754332 3678999999999999886
No 44
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.57 E-value=9.2e-15 Score=103.97 Aligned_cols=72 Identities=36% Similarity=0.496 Sum_probs=64.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||+++.|++|++++++|+++|++|+.+ .++.. .+...++|.+.||.|+||+|++++..|+||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~-~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWV-EVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEE-EecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999997 77652 34567899999999999999987559999999999984
No 45
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.57 E-value=1e-14 Score=104.03 Aligned_cols=72 Identities=40% Similarity=0.511 Sum_probs=64.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||+++.|+++++++++|+++|++|+.+ .++.. ++...++|.+.||.|+||+|++++..|+||.||++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~-~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERI-DAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEE-EeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 48999999999999999999999999997 66542 34567899999999999999988779999999999984
No 46
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.56 E-value=3.4e-14 Score=110.58 Aligned_cols=112 Identities=24% Similarity=0.374 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhh-----hccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFI-----PRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMT 164 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~ 164 (312)
+++++.+|+.|..+.+.+.+..++. +..+ .+.+....+.....+.+.++.||++|.+++|++|+++|+|||+++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~ 80 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLG-LPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHL 80 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHH
Confidence 5789999999999888777655322 2222 245667777788899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHh
Q 021466 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
+.+.++... .....+..+|+|.+|+++|.++|.++.++
T Consensus 81 ~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 81 PYLQYLMAT-PFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHc-cchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 998776532 11223568999999999999999998763
No 47
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.56 E-value=6e-15 Score=105.23 Aligned_cols=72 Identities=19% Similarity=0.176 Sum_probs=63.2
Q ss_pred CeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+++||+++.+++|+++|++|+++|++|+.+ .++.+ ...+++...||.|+||+|++++..|+||.||++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~-~v~~~--~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEE-RVTYE--EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEE-EecHH--HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 469999999999999999999999999997 77652 2345788999999999999876699999999999976
No 48
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.56 E-value=1.6e-14 Score=103.24 Aligned_cols=72 Identities=29% Similarity=0.400 Sum_probs=63.6
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCC-CcccEEEcCCcccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPI-GKVPVLETPDGPIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~-gkvP~L~~~~g~l~eS~aI~~yL~~~ 77 (312)
++||++..||+|++++++|+++|++|+.+ .++. ..+.++|.+.||. |+||+|++++..|+||.+|++||++.
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~-~~~~--~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~ 73 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYV-EEDL--GNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEA 73 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEE-EeCc--ccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhh
Confidence 58999999999999999999999999997 6654 3567889999996 99999998655999999999999874
No 49
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.56 E-value=1.6e-14 Score=102.88 Aligned_cols=72 Identities=40% Similarity=0.590 Sum_probs=63.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~ 75 (312)
++||+++.|++|++++++|+++|++|+.+ .++.. .+...+++.+.||.|+||+|+.++| .|+||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~-~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLV-TVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEE-EeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 48999999999999999999999999997 77653 2345788999999999999997777 9999999999985
No 50
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.55 E-value=6.5e-14 Score=107.34 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~ 168 (312)
.+++++++|+.++++.+.+.+...+.+ .....+.....+...|..||++|.+++|++|+++|+|||++++.+.
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~ 74 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKG-------RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLW 74 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-------cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHH
Confidence 579999999999999888777554421 1445667888999999999999999999999999999999999975
Q ss_pred HHHhhhcCccccccChhHHHHHHHHhcChhHHHH
Q 021466 169 LGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKI 202 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~ 202 (312)
++. ..+-.+...+|+|.+|+++|.++|+++.+
T Consensus 75 ~~~--~~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 75 RLP--ALGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHH--HcCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 443 22322335799999999999999999875
No 51
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.55 E-value=4.7e-14 Score=110.58 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhcc-ccccC-CHHHHHHHHHHHHHHHHHHHHhhh--cCCeecCCCchHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRV-GFAVY-LPQAEEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMT 164 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~~TlADi~l~ 164 (312)
.+++.+++|+.|+++.+.+.+...+.... +.... .....+...+.+...|..||++|. .++||+|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 47899999999999888876433332221 11111 233344556778999999999998 457999999999999999
Q ss_pred HHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcc
Q 021466 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (312)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~ 205 (312)
+.+.++....++ ...||+|.+|+++|.++|.|+.+...
T Consensus 82 ~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 82 PQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 998876544332 47899999999999999999998653
No 52
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.55 E-value=2e-14 Score=102.42 Aligned_cols=70 Identities=31% Similarity=0.472 Sum_probs=62.5
Q ss_pred eEEeecCCCccHHHHHHHHHH--cCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEY--TGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~--~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~ 75 (312)
++||++..|++|+++|++|.+ +|++|+.+ .++. ....++|.+.+|.|+||+|++++| .|+||.||++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~-~~~~--~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELV-LVNP--WSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEE-EcCc--ccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 489999999999999999999 89999997 6654 346789999999999999997677 9999999999984
No 53
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.55 E-value=2.1e-14 Score=106.54 Aligned_cols=72 Identities=29% Similarity=0.404 Sum_probs=63.7
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHh
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVA 75 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~ 75 (312)
|.++||++..||+|++++++|++.|++|+.+ .++.. ...+++.+.||.++||+|++++| .|+||.||++||+
T Consensus 17 ~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~-~v~~~--~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 17 GIIRLYSMRFCPYAQRARLVLAAKNIPHEVI-NINLK--DKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CcEEEEeCCCCchHHHHHHHHHHcCCCCeEE-EeCCC--CCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 3579999999999999999999999999997 77652 34577999999999999998756 9999999999985
No 54
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.55 E-value=5.2e-14 Score=110.98 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~ 168 (312)
.+++++++|+.|+++.+.+.+...+.. .+...+.....+.+.++.||++|.+++||+|+++|+|||++++.+.
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~ 74 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-------KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLG 74 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Confidence 478999999999998888877655432 1345566788899999999999998999999999999999999988
Q ss_pred HHHhh--hcCcc--ccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 169 LGFSR--ILSKS--FTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 169 ~~~~~--~~~~~--~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
++... ..+.. ....+|++.+|+++|.++|+|+.++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 75 WFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 76432 22222 2467999999999999999999987654
No 55
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.55 E-value=2.3e-14 Score=102.86 Aligned_cols=75 Identities=36% Similarity=0.490 Sum_probs=65.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKA 79 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~ 79 (312)
++||+++. +++++++++|+++|++|+.+ .++.. .+...++|.+.||.|+||+|++++..|+||.+|++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELV-LYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEE-EeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 48999875 78999999999999999997 77653 356788999999999999999766699999999999998653
No 56
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.54 E-value=7.9e-15 Score=104.26 Aligned_cols=72 Identities=28% Similarity=0.281 Sum_probs=61.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
++||+++.+++|+++|++|+++|++|+.+ .++... ....+|...||.|+||+|++++..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~~~~~~-~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDV-RITYEE-WPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEE-EeCHHH-hhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999997 666522 2234588899999999999876699999999999964
No 57
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.53 E-value=3.2e-14 Score=101.17 Aligned_cols=72 Identities=22% Similarity=0.346 Sum_probs=64.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCC-CCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMG-VTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~-~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||++..|++++++|++|+++|++|+.+ .+++. .+...++|.+.||.|+||+|++++..|+||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~-~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYV-PVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEE-EecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999997 77653 34567899999999999999988669999999999984
No 58
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.53 E-value=3e-14 Score=100.93 Aligned_cols=70 Identities=23% Similarity=0.266 Sum_probs=59.9
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~ 76 (312)
++||++..||+|+++|++|.++|++|+.+ .++.. ......+.+|.|+||+|++++| .|+||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~-~~~~~---~~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQI-ILQND---DEATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEE-ECCCC---chHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 48999999999999999999999999997 66541 2234567899999999998766 99999999999964
No 59
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.53 E-value=1.1e-13 Score=106.25 Aligned_cols=107 Identities=27% Similarity=0.444 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccc--cccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVG--FAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l 167 (312)
+++++++|+.|..+.+.+.+..++..... ....+....+.....+.+.|+.||++|.+++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 47899999999999999888665443222 1223456667788899999999999999999999999999999999887
Q ss_pred HHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 168 TLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
........ .+..||+|.+|+++|.++|+|
T Consensus 82 ~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHccc---ccccCchHHHHHHHHHhCCCC
Confidence 54333221 257899999999999999875
No 60
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.53 E-value=3.7e-14 Score=104.55 Aligned_cols=69 Identities=13% Similarity=0.181 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCC
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAD 80 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~ 80 (312)
..||+|+++||+|+++||+|+++ .+++ .+.+++|+++||.|+||+|++++..|+||.+|++||++.++.
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~-~vd~--~~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVT-TVDM--KRKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEE-EeCC--CCCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 35899999999999999999997 7776 356799999999999999998766999999999999998754
No 61
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.52 E-value=7e-14 Score=109.18 Aligned_cols=108 Identities=19% Similarity=0.353 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~ 169 (312)
+++++++|++|..+.+.+.+..++.+..... ....+.....+.+.++.||++|++++||+|+++|+|||++++.+.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~ 78 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGG---AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVST 78 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHH
Confidence 5789999999999888887766655432111 1334566778999999999999989999999999999999999987
Q ss_pred HHh-hhcCccccccChhHHHHHHHHhcChhHHHHh
Q 021466 170 GFS-RILSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 170 ~~~-~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
+.. ..++ ...+|+|.+|+++|.++|.|++..
T Consensus 79 ~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 79 LEALLPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHhcCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 753 2222 457999999999999999999754
No 62
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.51 E-value=1.5e-13 Score=111.00 Aligned_cols=111 Identities=18% Similarity=0.207 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLT 168 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~ 168 (312)
+.+++|++|++|....+.+.+..... ..++...+.....+...|+.||++|.+++|++|+++|+|||++++.+.
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~ 76 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGF------ATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLI 76 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHH
Confidence 45888999999999888777543221 234667778888999999999999999999999999999999999987
Q ss_pred HHHhh---hc--CccccccChhHHHHHHHHhcChhHHHHhcc
Q 021466 169 LGFSR---IL--SKSFTSEFPHIERYFWTMVNIPNFRKILGE 205 (312)
Q Consensus 169 ~~~~~---~~--~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~ 205 (312)
++... .. +......||+|.+|+++|.++|+|++++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 77 RFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 65321 11 112245899999999999999999998765
No 63
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.49 E-value=3.5e-13 Score=115.34 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=126.0
Q ss_pred CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCCCCCCCHH
Q 021466 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLLGSSLI 89 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~g~~~~ 89 (312)
.||+|.++.+.+...+|+|+++ .-.+ ...+..|++|.++.++..+.+|.-|..+|.+++.-+..+ +++
T Consensus 60 LSPfClKvEt~lR~~~IpYE~~-~~~~---------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L--~~e 127 (281)
T KOG4244|consen 60 LSPFCLKVETFLRAYDIPYEIV-DCSL---------KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDL--SAE 127 (281)
T ss_pred CChHHHHHHHHHHHhCCCceec-cccc---------eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCC--CHH
Confidence 3899999999999999999997 3221 146789999999998889999999999999876654433 466
Q ss_pred HHHHHHHHHHHHhccchhhHHHh-------hhhccccc-----------------cCCHH------------HHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRW-------FIPRVGFA-----------------VYLPQ------------AEEAAIAS 133 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~-------~~~~~~~~-----------------~~~~~------------~~~~~~~~ 133 (312)
++|+......++++++...+..+ +....+.. -+.++ ..++..+.
T Consensus 128 ~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~el 207 (281)
T KOG4244|consen 128 QRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDEL 207 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHH
Confidence 78887777777776655554221 11110000 00011 11234556
Q ss_pred HHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCc----cccccChhHHHHHHHHhc
Q 021466 134 LKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 134 l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~----~~~~~~P~l~rw~~~v~~ 195 (312)
+.+-|+.+++.|++..||.|+++|-+|+.+|+.|..++. -+.. -+...+|||..|.+||.+
T Consensus 208 l~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 208 LHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 788899999999999999999999999999999987654 2222 234679999999999985
No 64
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.47 E-value=4.4e-13 Score=105.81 Aligned_cols=113 Identities=14% Similarity=0.272 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhccchhhHHHhhhh-----ccccccCCHHHHHHHHHHHHHHHHHHHHhh-hcCCeecCCCchHHHHHHH
Q 021466 91 SAHIEQWIDFSSLEIDTNILRWFIP-----RVGFAVYLPQAEEAAIASLKRALAALNTHL-ASNTYLVGHSVTLADIIMT 164 (312)
Q Consensus 91 ~a~v~~w~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L-~~~tfLvGe~~TlADi~l~ 164 (312)
++++++|+.|..+.+...+...+.. ..+..+.+....+...+.+.+.+..+|++| .+++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 5778999999998887665442222 112233467777888899999999999985 5578999999999999999
Q ss_pred HHHHHHHhhhcCccccccChhHHHHHHHHhc--ChhHHHHhcc
Q 021466 165 CNLTLGFSRILSKSFTSEFPHIERYFWTMVN--IPNFRKILGE 205 (312)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~--~p~~~~~~~~ 205 (312)
+.+.+...... .....||+|.+|+++|.+ +|+++.+..-
T Consensus 82 ~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~ 122 (126)
T cd03183 82 CEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLFDEAHKI 122 (126)
T ss_pred HHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhHHHHHHH
Confidence 98876643332 235789999999999999 9999987654
No 65
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=1.2e-12 Score=105.27 Aligned_cols=186 Identities=18% Similarity=0.190 Sum_probs=122.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADN 81 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~ 81 (312)
|+||.|..||+|.|+|+++-++|||++.. ....+- .+--..+--..+||+|+-+|| .+.||..|.+|+.+..+.+
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~-vL~nDD---e~Tp~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELH-VLLNDD---EETPIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhh-eeccCc---ccChhhhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 48999999999999999999999999996 544321 111224445678999999999 9999999999999976543
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHhhh-hccc--------------------cccCCHHHHHHHHHHHHHHHHH
Q 021466 82 PLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFI-PRVG--------------------FAVYLPQAEEAAIASLKRALAA 140 (312)
Q Consensus 82 ~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~-~~~~--------------------~~~~~~~~~~~~~~~l~~~L~~ 140 (312)
-|-+.- +-.++.|+.-++..+.......+. .-+. .....-........++...|+.
T Consensus 77 ~lt~~~---~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~ 153 (215)
T COG2999 77 LLTGKV---RPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRA 153 (215)
T ss_pred hhccCc---CHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHH
Confidence 333322 445777877665543333221111 0000 0000011223345567777888
Q ss_pred HHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHH
Q 021466 141 LNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFR 200 (312)
Q Consensus 141 Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~ 200 (312)
|+..+...+-+ ...+|+-||.+|+.|..+ ..+-+-.|. ..|..|..+|+...++.
T Consensus 154 l~~Li~~~s~~-n~~l~~ddi~vFplLRnl-t~v~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 154 LDKLIVGPSAV-NGELSEDDILVFPLLRNL-TLVAGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHhcCcchh-ccccchhhhhhhHHhccc-eecccCCCc---HHHHHHHHHHHHhhCcc
Confidence 88877776633 345999999999998744 334443332 47888999999876554
No 66
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.46 E-value=1.6e-13 Score=100.04 Aligned_cols=73 Identities=27% Similarity=0.303 Sum_probs=59.4
Q ss_pred EEeecCCCccHHHHHHHHHHcCCCEEEEecccCCC-CCC-ChHHHH-----hCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 4 VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV-TNK-TPEFLK-----MNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~-~~~-~~~~~~-----~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+|||+..+++|++++++|+++|++|+.+ .+++.. +.. .+++.. .+|+|+||+|++++..|+||.||++||++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~-~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~ 80 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEK-RYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIAR 80 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEE-EeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhh
Confidence 7999999999999999999999999997 777632 211 244442 23999999999865599999999999987
Q ss_pred c
Q 021466 77 L 77 (312)
Q Consensus 77 ~ 77 (312)
.
T Consensus 81 ~ 81 (82)
T cd03075 81 K 81 (82)
T ss_pred c
Confidence 5
No 67
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.46 E-value=1.2e-13 Score=97.64 Aligned_cols=66 Identities=41% Similarity=0.553 Sum_probs=56.0
Q ss_pred CCccHHHHHHHHHHcCCCEEEEecccC--CCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhh
Q 021466 10 TNKNAFKALITAEYTGVNVELVKNFEM--GVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVAR 76 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~~~~~~~v~~--~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~ 76 (312)
.||+++|++++++++|+++++. .+.. ..+...++|.+.||.|+||+|++++| +++||.+|++||++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~-~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIK-VVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEE-EEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CchHhHHHHHHHHHhCCCCEEE-EEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 3899999999999999999986 5532 23456689999999999999999877 99999999999986
No 68
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.46 E-value=2.9e-13 Score=101.78 Aligned_cols=96 Identities=25% Similarity=0.417 Sum_probs=77.1
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCe
Q 021466 71 ARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTY 150 (312)
Q Consensus 71 ~~yL~~~~~~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tf 150 (312)
+|||++. .+|+|.+..++++++.|+++....+.. .....+...++.||++|.+++|
T Consensus 1 ~r~~~~~---~~~~~~~~~~~~~vd~~~d~~~~~l~~---------------------~~~~~~~~~l~~le~~L~~~~f 56 (96)
T cd03200 1 ARFLYRL---LGPAPNAPNAATNIDSWVDTAIFQLAE---------------------GSSKEKAAVLRALNSALGRSPW 56 (96)
T ss_pred CchHHHH---hcccCCCchHHHHHHHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHcCCCc
Confidence 4789886 469999999999999999987654421 1224566788899999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcC
Q 021466 151 LVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNI 196 (312)
Q Consensus 151 LvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~ 196 (312)
++|+++|+|||++++.+.+. ... ...||||.+|+++|.++
T Consensus 57 l~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 57 LVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred cCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 99999999999999887643 111 35799999999999864
No 69
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.44 E-value=2.3e-13 Score=103.08 Aligned_cols=100 Identities=25% Similarity=0.358 Sum_probs=76.4
Q ss_pred HHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhh
Q 021466 94 IEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSR 173 (312)
Q Consensus 94 v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~ 173 (312)
+++|+.|..+.+.+.....+....+..+ ...+.....+...+..||++|++++|++|+++|+|||.+++.+.+....
T Consensus 1 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~ 77 (100)
T cd03206 1 VQRWLSVAAGEIANGPAAARLITLFGAP---LDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG 77 (100)
T ss_pred CceehhhhhhhcccchhHHHHHHHhCCH---hHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc
Confidence 3689999999887655444332222111 2456678899999999999999999999999999999999888654332
Q ss_pred hcCccccccChhHHHHHHHHhcChhH
Q 021466 174 ILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 174 ~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
.. ....||+|.+|+++|.++|+|
T Consensus 78 ~~---~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 78 GV---DLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred CC---ChhhCcHHHHHHHHHHhCcCC
Confidence 22 256899999999999999875
No 70
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.43 E-value=3.6e-13 Score=102.42 Aligned_cols=100 Identities=24% Similarity=0.391 Sum_probs=80.8
Q ss_pred HHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhh
Q 021466 95 EQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRI 174 (312)
Q Consensus 95 ~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~ 174 (312)
++|+.|..+.+.+.+...+... .....+.....+...++.||++|++++|++|+++|+|||++++.+.++...
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~- 74 (103)
T cd03207 2 LRWLFFYAGVVEPALIAKAMGI------EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF- 74 (103)
T ss_pred eeeeeeccccccHHHHHHHcCC------CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-
Confidence 4677788777777765544321 233456677889999999999999999999999999999999999887643
Q ss_pred cCccccccChhHHHHHHHHhcChhHHHHhc
Q 021466 175 LSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (312)
Q Consensus 175 ~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~ 204 (312)
+ +...+|+|.+|++++.++|.|+.+..
T Consensus 75 -~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 75 -G--LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred -C--CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 2 25789999999999999999998864
No 71
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.42 E-value=5.7e-13 Score=96.47 Aligned_cols=71 Identities=23% Similarity=0.186 Sum_probs=58.6
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHh-----CCCCcccEEEcCCcccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKM-----NPIGKVPVLETPDGPIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~-----~P~gkvP~L~~~~g~l~eS~aI~~yL~~~ 77 (312)
++||+++.++++++++++|+++|++|+.+ .++. .++|.+. .|.|+||+|++++..|+||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~-~v~~-----~~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEK-FIES-----AEDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEE-Eecc-----HHHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 48999999999999999999999999997 6654 1333333 36999999997555999999999999986
Q ss_pred cC
Q 021466 78 KA 79 (312)
Q Consensus 78 ~~ 79 (312)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 53
No 72
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=6.8e-13 Score=113.95 Aligned_cols=193 Identities=20% Similarity=0.211 Sum_probs=138.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEE-eccc--C--CCCCCChH------------------HHHhCCC----Cccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELV-KNFE--M--GVTNKTPE------------------FLKMNPI----GKVP 55 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~-~~v~--~--~~~~~~~~------------------~~~~~P~----gkvP 55 (312)
+.||..-.||++.+.+|+-+++|++--+. ..+. + .++...++ |....|. -+||
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVP 131 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVP 131 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEE
Confidence 57998889999999999999999962221 0121 1 11111111 2222332 2699
Q ss_pred EEEcCCc---ccccHHHHHHHHhhccC-----CCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHH
Q 021466 56 VLETPDG---PIFESNAIARYVARLKA-----DNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAE 127 (312)
Q Consensus 56 ~L~~~~g---~l~eS~aI~~yL~~~~~-----~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 127 (312)
||-+... +=.||..|++-+...+. ...|+|.. -+.+|+.|.+++...+-..+-..-+ ..+.++-
T Consensus 132 VLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GF------A~tq~aY 203 (324)
T COG0435 132 VLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGF------ATTQEAY 203 (324)
T ss_pred EEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeeecc------cchHHHH
Confidence 9988766 56799999999987543 24688854 4888999999887766544432211 2246677
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcC-----ccccccChhHHHHHHHHhcChhHHHH
Q 021466 128 EAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILS-----KSFTSEFPHIERYFWTMVNIPNFRKI 202 (312)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~-----~~~~~~~P~l~rw~~~v~~~p~~~~~ 202 (312)
+++...+=..|+.||+.|+++.||+|+++|-||+-+|+.|.+......+ -.-+..||||..|+..+-+.|.|..+
T Consensus 204 eea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T 283 (324)
T COG0435 204 EEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAET 283 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccc
Confidence 8888889999999999999999999999999999999999875443222 11134599999999999999999886
Q ss_pred h
Q 021466 203 L 203 (312)
Q Consensus 203 ~ 203 (312)
.
T Consensus 284 ~ 284 (324)
T COG0435 284 V 284 (324)
T ss_pred c
Confidence 4
No 73
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.42 E-value=3.4e-12 Score=100.14 Aligned_cols=113 Identities=11% Similarity=0.193 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTL 169 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~ 169 (312)
+++.|++.++.+.+ +...+..+++. +......+.....+...++.||++|.+++||+|+++|+||+.+++.+.+
T Consensus 2 e~~~id~~~~~~~d-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~ 75 (121)
T cd03209 2 ERIRVDMLEQQAMD-LRMGLARICYS-----PDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQ 75 (121)
T ss_pred chHHHHHHHHHHHH-HHHHHHHhhcC-----cchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHH
Confidence 46788888777663 33333333321 1113455567778999999999999999999999999999999999887
Q ss_pred HHhhhcCccccccChhHHHHHHHHhcChhHHHHhccccccc
Q 021466 170 GFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (312)
Q Consensus 170 ~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~~ 210 (312)
+... .......||+|.+|+++|.++|.+++++...+...
T Consensus 76 ~~~~--~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~~ 114 (121)
T cd03209 76 HRIF--EPDCLDAFPNLKDFLERFEALPKISAYMKSDRFIK 114 (121)
T ss_pred HHHh--CccccccChHHHHHHHHHHHCHHHHHHHhcccCcC
Confidence 6432 22335789999999999999999999998776554
No 74
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.40 E-value=1e-12 Score=94.60 Aligned_cols=70 Identities=24% Similarity=0.328 Sum_probs=59.2
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcC---Cc-ccccHHHHHHHHhhc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETP---DG-PIFESNAIARYVARL 77 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~---~g-~l~eS~aI~~yL~~~ 77 (312)
++||+++.||+|++++++|.++||+|+.+ .++.. ...+ ...+|.++||+|+.+ +| .|+||.+|++||++.
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~-~~~~~---~~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~ 75 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVV-EVNPV---SRKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTY 75 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEE-ECCch---hHHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHH
Confidence 68999999999999999999999999997 65431 1122 467999999999976 46 999999999999874
No 75
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.40 E-value=8.6e-13 Score=94.02 Aligned_cols=67 Identities=24% Similarity=0.383 Sum_probs=58.4
Q ss_pred cCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 8 GNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 8 ~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
...|+++++++++|+++|++|+.+ .++...+...++|.++||.|+||+|++++..|+||.+|++||+
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~-~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEI-LVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEE-EeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 346899999999999999999997 7776444456899999999999999987669999999999984
No 76
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.40 E-value=2.3e-12 Score=101.55 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc--CCeecCCCchHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~~TlADi~l~~~l 167 (312)
+||+.+.|+++++ .+...+...+.. ++..+...+.+...++.||++|.+ ++|++|+++|+|||.+++.+
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~ 72 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLGA--------PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWF 72 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHhc--------cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHH
Confidence 5899999999997 444443333321 334457778899999999999986 79999999999999999998
Q ss_pred HHHHhhhcC---ccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 168 TLGFSRILS---KSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 168 ~~~~~~~~~---~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
.++...... ......||+|.+|+++|.++|+++.++.+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 73 ERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 765433211 1125789999999999999999999987653
No 77
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.39 E-value=1.4e-12 Score=91.07 Aligned_cols=71 Identities=37% Similarity=0.493 Sum_probs=61.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||+++.||+|++++++|+++|++|+.+ .++.... ...++...+|.+++|+|+.++..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~~~~-~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELV-PVDLGEG-EQEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEE-EeCCCCC-CCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999997 7765322 22268889999999999998669999999999984
No 78
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.39 E-value=1.2e-12 Score=93.80 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=57.7
Q ss_pred eEEeecC-------CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGN-------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~-------~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||++. .||+|++++++|.++|++|+.+ .++. .+.+|.|+||+|++++..|+||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~-~~~~---------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENK-FGGL---------AKRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEe-ecCc---------ccCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 5899988 5799999999999999999997 5543 258999999999987669999999999999
Q ss_pred hcc
Q 021466 76 RLK 78 (312)
Q Consensus 76 ~~~ 78 (312)
+.+
T Consensus 72 ~~~ 74 (75)
T cd03080 72 EKY 74 (75)
T ss_pred HHc
Confidence 864
No 79
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=1.2e-12 Score=99.69 Aligned_cols=102 Identities=22% Similarity=0.339 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhc--cccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPR--VGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l 167 (312)
+++++++|+.|..+.+.+.+....... .+..+.+....+.....+...++.||++|.+++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 589999999999888887765433322 123455677788889999999999999999899999999999999999998
Q ss_pred HHHHhhhcCccccccChhHHHHHHHHh
Q 021466 168 TLGFSRILSKSFTSEFPHIERYFWTMV 194 (312)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~l~rw~~~v~ 194 (312)
.++....++ ...+|+|.+|++++.
T Consensus 82 ~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HhccccCCC---hHhCccHHHHHHhhC
Confidence 876443332 467999999999873
No 80
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.38 E-value=1.1e-12 Score=96.19 Aligned_cols=69 Identities=23% Similarity=0.237 Sum_probs=56.0
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCC-CCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccC
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVT-NKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKA 79 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~-~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~ 79 (312)
..|++|+++|++|.++|++|+.+ .++.... ....++ +.+|.|+||+|++++| .|+||.+|++||++.++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~-~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTV-PVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEE-EecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 45899999999999999999997 6665322 222344 7899999999999735 99999999999998653
No 81
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.37 E-value=6.8e-12 Score=98.31 Aligned_cols=106 Identities=11% Similarity=0.176 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhh---cCCeecCCCchHHHHHH
Q 021466 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLA---SNTYLVGHSVTLADIIM 163 (312)
Q Consensus 87 ~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~---~~tfLvGe~~TlADi~l 163 (312)
++.+|++|++|+.|... +. ..++.+.++.. ..+.+...++.||+.|. +++|++| ++|+|||++
T Consensus 1 d~~~ra~~~~~~~~~~~-~~---~~~~~~~~~~~---------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l 66 (120)
T cd03203 1 DPAKREFADELLAYTDA-FT---KALYSSLIKGD---------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAY 66 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HH---HHHHHHHhcCC---------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHH
Confidence 46789999999999321 11 11222222111 12345667778888886 4899999 999999999
Q ss_pred HHHHHHHHh---hhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 164 TCNLTLGFS---RILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 164 ~~~l~~~~~---~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
++.+.++.. ...+..+...||+|.+|+++|.++|+|+++..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 67 VPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 999875532 1233334468999999999999999999987653
No 82
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.33 E-value=2.4e-11 Score=96.01 Aligned_cols=112 Identities=15% Similarity=0.250 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc---CCeecCCCchHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS---NTYLVGHSVTLADIIMTCN 166 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~---~tfLvGe~~TlADi~l~~~ 166 (312)
+++.+++.+..+. ++...+...++.. ...........+...|..||++|.+ ++||+|+++|+|||++++.
T Consensus 3 e~~~vd~~~~~~~-d~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~ 75 (126)
T cd03210 3 EAALIDMVNDGVE-DLRLKYVRMIYQN------YEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDL 75 (126)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcCc------HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHH
Confidence 5677777777665 4444443333311 1233455667789999999999985 5899999999999999999
Q ss_pred HHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccccccc
Q 021466 167 LTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIKQAE 210 (312)
Q Consensus 167 l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~~~~ 210 (312)
+.++... .......||+|.+|+++|.++|.|++++.......
T Consensus 76 ~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~~~~ 117 (126)
T cd03210 76 LDIHLVL--APGCLDAFPLLKAFVERLSARPKLKAYLESDAFKN 117 (126)
T ss_pred HHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcCCCC
Confidence 8776432 12235789999999999999999999988776543
No 83
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.33 E-value=6.9e-12 Score=96.33 Aligned_cols=79 Identities=23% Similarity=0.290 Sum_probs=66.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhcC----------CeecCCCchHHHHHHHHHHHHHHhhhcCccc--cccChhHHH
Q 021466 121 VYLPQAEEAAIASLKRALAALNTHLASN----------TYLVGHSVTLADIIMTCNLTLGFSRILSKSF--TSEFPHIER 188 (312)
Q Consensus 121 ~~~~~~~~~~~~~l~~~L~~Le~~L~~~----------tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~--~~~~P~l~r 188 (312)
+-|...++.....+...|+.||++|.++ +||+|+++|+|||++++.+.++....++... +..||+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 4567778888999999999999999875 4999999999999999999887654443221 368999999
Q ss_pred HHHHHhcChhH
Q 021466 189 YFWTMVNIPNF 199 (312)
Q Consensus 189 w~~~v~~~p~~ 199 (312)
|+++|.++|+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 84
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.32 E-value=9.5e-12 Score=92.97 Aligned_cols=74 Identities=27% Similarity=0.315 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcCh
Q 021466 123 LPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIP 197 (312)
Q Consensus 123 ~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p 197 (312)
.+...+.....+...|..+|++|.+++|++|+++|+|||++++.+.++........ .+.||+|.+|+++|.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 35567788889999999999999999999999999999999999998877654432 389999999999999987
No 85
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.32 E-value=1.4e-11 Score=97.56 Aligned_cols=84 Identities=21% Similarity=0.210 Sum_probs=68.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhc----------------CCeecCCCchHHHHHHHHHHHHHHhh---hcCccccccC
Q 021466 123 LPQAEEAAIASLKRALAALNTHLAS----------------NTYLVGHSVTLADIIMTCNLTLGFSR---ILSKSFTSEF 183 (312)
Q Consensus 123 ~~~~~~~~~~~l~~~L~~Le~~L~~----------------~tfLvGe~~TlADi~l~~~l~~~~~~---~~~~~~~~~~ 183 (312)
++...+.....+...|..||++|.+ +.||+|+++|+|||.+++.+.++... ..+..+...|
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~ 102 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADL 102 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccC
Confidence 3455677778999999999999987 67999999999999999998866321 1232334789
Q ss_pred hhHHHHHHHHhcChhHHHHhccc
Q 021466 184 PHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 184 P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
|+|.+|+++|.++|+|+.++...
T Consensus 103 P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 103 TGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred HHHHHHHHHHHCCHHHHHHcCCH
Confidence 99999999999999999987654
No 86
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.28 E-value=1.3e-11 Score=92.47 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=78.4
Q ss_pred HHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhh
Q 021466 95 EQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRI 174 (312)
Q Consensus 95 ~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~ 174 (312)
++|++|+++.+...+...+.........+....+...+.+...++.||++|.++.|++|+++|+|||.+++.+.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 57889998888777766655433222345677788889999999999999999999999999999999999999876654
Q ss_pred cCccccccChhHHHHHHHH
Q 021466 175 LSKSFTSEFPHIERYFWTM 193 (312)
Q Consensus 175 ~~~~~~~~~P~l~rw~~~v 193 (312)
....+...+|++.+|+++|
T Consensus 82 ~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred hhhhhhccCccHHHHHHhC
Confidence 4322357899999999875
No 87
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.27 E-value=5.3e-11 Score=95.45 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHH-H-HHHHHHHHHHHHHHHHHhhh--cCCeecCCCchHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQ-A-EEAAIASLKRALAALNTHLA--SNTYLVGHSVTLADIIMTC 165 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~~L~~Le~~L~--~~tfLvGe~~TlADi~l~~ 165 (312)
+++.+++.++.+.+ +...+..+++. .+..+. . .......+...|+.||++|. ++.|++|+++|+|||++++
T Consensus 3 e~a~iD~i~~~v~D-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~ 77 (137)
T cd03208 3 ERALIDMYVEGTAD-LMEMILMLPFL----PPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLE 77 (137)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHccC----ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHH
Confidence 57788888777753 33333333331 111111 1 23333456899999999998 6789999999999999999
Q ss_pred HHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhcccc
Q 021466 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEIK 207 (312)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~~ 207 (312)
.+.++... .......||+|.+|+++|.++|++++++....
T Consensus 78 ~l~~~~~~--~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 78 AILMVEEL--DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHHHHHh--chhhhccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 99876432 22235789999999999999999999987643
No 88
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=3.3e-11 Score=93.51 Aligned_cols=109 Identities=15% Similarity=0.045 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhc-cccccCCHHHHHHHHHHHHHHHHHHHHhhh-cCCeecCCCchHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPR-VGFAVYLPQAEEAAIASLKRALAALNTHLA-SNTYLVGHSVTLADIIMTCN 166 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~-~~tfLvGe~~TlADi~l~~~ 166 (312)
.+++++++|+.|+.+++.+......... +.. .......+.....+.+.+..||.+|. +++||+| ++|+||+++++.
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~ 79 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALM 79 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHH
Confidence 4789999999999999887622111011 110 11112345667778899999999995 5589999 599999999999
Q ss_pred HHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhc
Q 021466 167 LTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (312)
Q Consensus 167 l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~ 204 (312)
+.++....++ + . |+|.+|+++|.++|+|+..+.
T Consensus 80 ~~~~~~~g~~--l-~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRLVLNGDP--V-P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHcCCC--C-C--HHHHHHHHHHHCCHHHHHHHh
Confidence 9988665443 2 2 999999999999999999874
No 89
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.27 E-value=2.1e-11 Score=85.64 Aligned_cols=68 Identities=29% Similarity=0.312 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHH
Q 021466 125 QAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWT 192 (312)
Q Consensus 125 ~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~ 192 (312)
...+.+...+...|+.||++|.+++|++|+++|+|||++++.+.++.....+..+...||+|.+|+++
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 35677888999999999999999999999999999999999999887765554567899999999986
No 90
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.26 E-value=6.9e-12 Score=94.78 Aligned_cols=95 Identities=28% Similarity=0.368 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCC--eecCCCchHHHHHHHH
Q 021466 88 LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLASNT--YLVGHSVTLADIIMTC 165 (312)
Q Consensus 88 ~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~t--fLvGe~~TlADi~l~~ 165 (312)
+..++++++|++|.. .+..............+...+.+...|+.||++|.+++ ||+|+++|+||+++++
T Consensus 3 ~~~~a~i~~W~~f~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~ 73 (99)
T PF14497_consen 3 PYWRALIDRWLDFSV---------AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFG 73 (99)
T ss_dssp -TTHHHHHHHHH-GH---------CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHH
T ss_pred hHHHHHHHHHHhccc---------hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHH
Confidence 456788999999661 11111111111233556777889999999999999988 9999999999999999
Q ss_pred HHHHHHhhhcCccccccChhHHHHHHHHhc
Q 021466 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~ 195 (312)
.|..+... .+.+.||||.+|+++|.+
T Consensus 74 ~l~~~~~~----~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 74 FLASLRWA----DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHCC----HHTTTCHHHHHHHHHHHT
T ss_pred HHHHHhhc----ccccccHHHHHHHHhhcC
Confidence 88654322 112689999999999974
No 91
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.25 E-value=1.4e-10 Score=95.63 Aligned_cols=175 Identities=18% Similarity=0.247 Sum_probs=131.3
Q ss_pred CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhccCCCCCC-CCCH
Q 021466 10 TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLL-GSSL 88 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~-g~~~ 88 (312)
.+.-|..|...|..+++||.++ .- ...+| ++|.|+||.|..+...+.|-.+|..++..+. ..|- +-+.
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~-~~------~Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~--~~l~s~lsE 101 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVR-QR------ANAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKG--VTLTSWLSE 101 (257)
T ss_pred cchhHHHHHHHHHHcCCCceee-ec------CCccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhc--cchhhhhhh
Confidence 4677999999999999999997 21 22333 7899999999998779999999999998852 1221 2345
Q ss_pred HHHHHHHHHHHHHhccchhhH--HHh---------hhhccc------------------------cccCCHHHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNI--LRW---------FIPRVG------------------------FAVYLPQAEEAAIAS 133 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~--~~~---------~~~~~~------------------------~~~~~~~~~~~~~~~ 133 (312)
.+++.++.+++++++.+..+- ..| .....| ...++....+...++
T Consensus 102 ~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~ 181 (257)
T KOG3027|consen 102 DQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQ 181 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHH
Confidence 678999999998876543331 111 011111 112345566778889
Q ss_pred HHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCc----cccccChhHHHHHHHHhc
Q 021466 134 LKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 134 l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~----~~~~~~P~l~rw~~~v~~ 195 (312)
+...++.|..+|++.+||.|+++|-+|..+|+++..+.+.-+.. ...++|+||..+..||.+
T Consensus 182 vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 182 VDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877765432 235789999999999985
No 92
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=2.2e-11 Score=103.77 Aligned_cols=193 Identities=21% Similarity=0.188 Sum_probs=134.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCE----EEEec-ccCCCCCCCh--------------------------HHHHhCCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNV----ELVKN-FEMGVTNKTP--------------------------EFLKMNPI 51 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~----~~~~~-v~~~~~~~~~--------------------------~~~~~~P~ 51 (312)
+.||..-.||++.|++++.+++|++- .++-. .+..++.... -|...+|.
T Consensus 38 yhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p~ 117 (319)
T KOG2903|consen 38 YHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASPN 117 (319)
T ss_pred EEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCCC
Confidence 46888778999999999999999962 22201 1111111111 11112232
Q ss_pred ----CcccEEEcCCc---ccccHHHHHHHHhhc---------cCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhh
Q 021466 52 ----GKVPVLETPDG---PIFESNAIARYVARL---------KADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIP 115 (312)
Q Consensus 52 ----gkvP~L~~~~g---~l~eS~aI~~yL~~~---------~~~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~ 115 (312)
-+||||=+-.. +=.||..|++.+.+. .+.-.|+|.. -+++|+.|.+|+...+-..+-..-+
T Consensus 118 Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GF- 194 (319)
T KOG2903|consen 118 YTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGF- 194 (319)
T ss_pred CCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeeecc-
Confidence 26999976554 667999999999832 2234577744 5889999999887766554432221
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCC--eecCCCchHHHHHHHHHHHHHHhhhc------CccccccChhHH
Q 021466 116 RVGFAVYLPQAEEAAIASLKRALAALNTHLASNT--YLVGHSVTLADIIMTCNLTLGFSRIL------SKSFTSEFPHIE 187 (312)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~t--fLvGe~~TlADi~l~~~l~~~~~~~~------~~~~~~~~P~l~ 187 (312)
..+.+.-+.....+-+.|+.+|+.|+++. |++|+++|.|||-+|+.+.+...... -..+|+.||+|.
T Consensus 195 -----A~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~ 269 (319)
T KOG2903|consen 195 -----AEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLH 269 (319)
T ss_pred -----ccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHH
Confidence 22455667777888889999999999987 99999999999999999886544221 123577999999
Q ss_pred HHHHHHhc-ChhHHHHh
Q 021466 188 RYFWTMVN-IPNFRKIL 203 (312)
Q Consensus 188 rw~~~v~~-~p~~~~~~ 203 (312)
.|...|-. .|+|..+.
T Consensus 270 ~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 270 NWLKNIYWNIPGFSSTT 286 (319)
T ss_pred HHHHHHHhhccchhhcc
Confidence 99999987 78888764
No 93
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.23 E-value=3e-11 Score=85.71 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=55.2
Q ss_pred eEEeecC-------CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGN-------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~-------~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||.++ .||+|++++++|+++||+|+.+ .++.. ..+|.|+||+|+.++..++||.+|++||.
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~-~~~~~---------~~~p~g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVV-FSSNP---------WRSPTGKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEE-ecCCc---------ccCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence 3677776 6999999999999999999997 66541 17899999999987669999999999998
Q ss_pred h
Q 021466 76 R 76 (312)
Q Consensus 76 ~ 76 (312)
+
T Consensus 71 ~ 71 (72)
T cd03054 71 K 71 (72)
T ss_pred h
Confidence 6
No 94
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.20 E-value=1.8e-09 Score=95.00 Aligned_cols=175 Identities=18% Similarity=0.218 Sum_probs=123.4
Q ss_pred CccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHHhhccCCCCCCC-CCH
Q 021466 11 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKADNPLLG-SSL 88 (312)
Q Consensus 11 ~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL~~~~~~~~L~g-~~~ 88 (312)
++-|..+.+.+++++-+.+++ .... . ..+|.|++|+|++++| .+.+-..|..||...-.+-.+-. -..
T Consensus 17 d~~sL~~l~y~kl~~~~l~v~-~ssN-~--------~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~ 86 (313)
T KOG3028|consen 17 DPDSLAALIYLKLAGAPLKVV-VSSN-P--------WRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSA 86 (313)
T ss_pred ChhHHHHHHHHHHhCCCceeE-eecC-C--------CCCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHH
Confidence 788999999999999666664 2111 1 2678999999999998 89999999999987422212211 125
Q ss_pred HHHHHHHHHHHHHhccchhhHHHhhhhc-----------c-ccc--cCC----------------------HHHHHHHHH
Q 021466 89 IDSAHIEQWIDFSSLEIDTNILRWFIPR-----------V-GFA--VYL----------------------PQAEEAAIA 132 (312)
Q Consensus 89 ~e~a~v~~w~~~~~~~l~~~~~~~~~~~-----------~-~~~--~~~----------------------~~~~~~~~~ 132 (312)
.+.+++..|++++...+.+.+...++-- . ... |.| ....+....
T Consensus 87 kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~ 166 (313)
T KOG3028|consen 87 KQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYK 166 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHH
Confidence 6788999999999988887764221100 0 000 111 111223334
Q ss_pred HHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccc----cccChhHHHHHHHHhc
Q 021466 133 SLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSF----TSEFPHIERYFWTMVN 195 (312)
Q Consensus 133 ~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~----~~~~P~l~rw~~~v~~ 195 (312)
....++..|.++|++.+|+.|+++|--|+.+++++..++..-+...- ...++||.|+.+++..
T Consensus 167 ~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 167 DASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 56678889999999999999999999999999999986665443221 2338999999999985
No 95
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.17 E-value=2.3e-10 Score=89.76 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHhhhc-CCeecCCCchHHHHHHHHHHHHHHhhh---cCccccccChhHHHHHHHHhcChhHHHHh
Q 021466 128 EAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTCNLTLGFSRI---LSKSFTSEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L~~-~tfLvGe~~TlADi~l~~~l~~~~~~~---~~~~~~~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
+.....+.+.|..||.+|.+ ++||+|+++|+|||++++.+.++.... .+-.....+|+|.+|+++|.++|+|+.++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 45567789999999999985 799999999999999999876554221 11112378999999999999999999987
Q ss_pred ccc
Q 021466 204 GEI 206 (312)
Q Consensus 204 ~~~ 206 (312)
...
T Consensus 109 ~~~ 111 (121)
T cd03201 109 AEK 111 (121)
T ss_pred CCH
Confidence 643
No 96
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.14 E-value=1.9e-10 Score=87.39 Aligned_cols=100 Identities=17% Similarity=0.300 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc--CCeecCCCchHHHHHHHHHH
Q 021466 90 DSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS--NTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 90 e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~--~tfLvGe~~TlADi~l~~~l 167 (312)
++++|+.|++.+ +++...+...+++..+ .+..........+.+...+..||++|.+ ++|++|+++|+|||++++.+
T Consensus 2 e~~~v~~~~~~~-~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~ 79 (104)
T cd03192 2 EAARVDALVDTI-ADLRAEFAKYFYEKDG-EEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVL 79 (104)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHhhcCch-HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHH
Confidence 578899999985 4676666666654221 1223566677788899999999999987 89999999999999999999
Q ss_pred HHHHhhhcCccc-cccChhHHHHHHHH
Q 021466 168 TLGFSRILSKSF-TSEFPHIERYFWTM 193 (312)
Q Consensus 168 ~~~~~~~~~~~~-~~~~P~l~rw~~~v 193 (312)
.++... +... ...||+|.+|+++|
T Consensus 80 ~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 80 DYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhh--CchhhHHhChhHHHHHHhC
Confidence 876433 2222 57899999999875
No 97
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=6.7e-10 Score=86.18 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=66.6
Q ss_pred HHHHHHHHhccchhhHHHhhhhccccc---cCCHHHHHHHHHHHHHHHHHHHHhh---hcCCeecCCCchHHHHHHHHHH
Q 021466 94 IEQWIDFSSLEIDTNILRWFIPRVGFA---VYLPQAEEAAIASLKRALAALNTHL---ASNTYLVGHSVTLADIIMTCNL 167 (312)
Q Consensus 94 v~~w~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~Le~~L---~~~tfLvGe~~TlADi~l~~~l 167 (312)
++.|..+.++++...+..++....... ...+...+.....+.+.+..||..| .+++||+|+ +|+|||.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~ 81 (114)
T cd03194 3 ARAWARSAAAEMHSGFAALRSECPMNLRARVPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVV 81 (114)
T ss_pred hhHHHHHHHHHHHCcHHHHHHhCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHH
Confidence 345555666666666655444322110 0011122233344555555555554 467899999 999999999998
Q ss_pred HHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhc
Q 021466 168 TLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (312)
Q Consensus 168 ~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~ 204 (312)
.++... +.. ..|+|.+|+++|.++|+|++.+.
T Consensus 82 ~~~~~~--~~~---~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 82 TRFRTY--GLP---LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHc--CCC---CCHHHHHHHHHHHCCHHHHHHHh
Confidence 877443 222 23999999999999999998764
No 98
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.10 E-value=5.3e-10 Score=84.22 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=72.1
Q ss_pred HHHHHHHhccchhhHHHhhh-hccccccCCHHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhh
Q 021466 95 EQWIDFSSLEIDTNILRWFI-PRVGFAVYLPQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSR 173 (312)
Q Consensus 95 ~~w~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~ 173 (312)
.+|..+.++-+...+..... ........+....+.....+.+.|..||++|.+++| +++|+|||++++.+.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~ 78 (98)
T cd03205 2 LRLEALADGILDAAVAIVYERRLRPEEKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFR 78 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcHhhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhH
Confidence 46777776655555533322 222334556778889999999999999999999898 89999999999999887544
Q ss_pred hcCccccccChhHHHHHHHH
Q 021466 174 ILSKSFTSEFPHIERYFWTM 193 (312)
Q Consensus 174 ~~~~~~~~~~P~l~rw~~~v 193 (312)
..+..+...||+|.+|+++|
T Consensus 79 ~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 79 HPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred ccCcchhhhChHHHHHHHhC
Confidence 34444457899999999875
No 99
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.04 E-value=9.2e-10 Score=81.17 Aligned_cols=66 Identities=20% Similarity=0.254 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCc----cccccChhHHHHHHHHh
Q 021466 129 AAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMV 194 (312)
Q Consensus 129 ~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~----~~~~~~P~l~rw~~~v~ 194 (312)
...+.+.+.++.||++|++++|++|+++|+|||++++.+.++....+.. .....||+|.+|+++|.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 5567899999999999999999999999999999999988775432221 12457999999999873
No 100
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.94 E-value=2.4e-09 Score=75.82 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=48.1
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+.+++|.+++++|+++|++|+.+ .+.. .. ..+|.|+||+|++++.+|+||.||+.||.+
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~-~~~~------~~--~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVR-CRAN------AE--FMSPSGKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEE-ecCC------cc--ccCCCCcccEEEECCEEEeCHHHHHHHHhc
Confidence 35789999999999999999986 4311 11 166789999999955599999999999976
No 101
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.92 E-value=4.3e-09 Score=82.86 Aligned_cols=69 Identities=22% Similarity=0.271 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcC
Q 021466 127 EEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNI 196 (312)
Q Consensus 127 ~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~ 196 (312)
.+.....+...|+.||++|.+++|++|+++|+||+++++.+.+.... .+......||+|.+|+++|.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhcC
Confidence 34667789999999999999999999999999999999999876542 2223356899999999999863
No 102
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.69 E-value=3.1e-08 Score=92.64 Aligned_cols=121 Identities=24% Similarity=0.400 Sum_probs=86.6
Q ss_pred CCc-ccccHHHHHHHHhhccCC-CCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHH
Q 021466 60 PDG-PIFESNAIARYVARLKAD-NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRA 137 (312)
Q Consensus 60 ~~g-~l~eS~aI~~yL~~~~~~-~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 137 (312)
.+| .+.++..+..|..+.... ..|+|.+ .++++|+.|++|+.. .....+...
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~-------------------------~~~~~~s~~ 96 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSST-------------------------FSFDEISSS 96 (712)
T ss_pred cccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhh-------------------------cchHHHHHH
Confidence 344 666777777776654333 3588988 889999999999964 112467788
Q ss_pred HHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhccc
Q 021466 138 LAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILGEI 206 (312)
Q Consensus 138 L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~~~ 206 (312)
+..|+.+|.-+|||+|.++|+||+++++.++.-....-.-.....+-+|.||++....++....+....
T Consensus 97 ~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~ 165 (712)
T KOG1147|consen 97 LSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVLATL 165 (712)
T ss_pred HHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHH
Confidence 889999999999999999999999999998842111100001246789999999666666666665444
No 103
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.68 E-value=3.8e-08 Score=78.91 Aligned_cols=65 Identities=18% Similarity=0.093 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHhhh-cCCeecCCCchHHHHHHHHHHHHHHhhhcCc-cccccChhHHHHHHHHhc
Q 021466 129 AAIASLKRALAALNTHLA-SNTYLVGHSVTLADIIMTCNLTLGFSRILSK-SFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 129 ~~~~~l~~~L~~Le~~L~-~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~-~~~~~~P~l~rw~~~v~~ 195 (312)
..++.|...++.+-+.+. ++.|++|+++|+|||++++.+..+.... +. + ...||+|.+|+++|.+
T Consensus 79 D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~-~~~D-l~~~p~I~~W~eRm~~ 145 (149)
T cd03197 79 DVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP-AFKD-MVEETKIGEWYERMDA 145 (149)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc-cccc-hhhCcCHHHHHHHHHH
Confidence 345555555555444554 5689999999999999999997664431 21 2 4589999999999985
No 104
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.68 E-value=3.5e-08 Score=77.86 Aligned_cols=69 Identities=14% Similarity=0.257 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhh-----hcCccccccChhHHHHHHHH
Q 021466 124 PQAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSR-----ILSKSFTSEFPHIERYFWTM 193 (312)
Q Consensus 124 ~~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~-----~~~~~~~~~~P~l~rw~~~v 193 (312)
....++....+...|+.|++.|++++||+|+++|.+|+++++.+..+... .+. .....||||.+|++||
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EKVKKYSNLLAFCRRI 125 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HHHHhCcHHHHHHHhc
Confidence 33456777888999999999999999999999999999999998877643 111 1256899999999987
No 105
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.67 E-value=5.9e-08 Score=77.72 Aligned_cols=71 Identities=17% Similarity=0.265 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCc----cccccChhHHHHHHHHhc
Q 021466 125 QAEEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSK----SFTSEFPHIERYFWTMVN 195 (312)
Q Consensus 125 ~~~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~----~~~~~~P~l~rw~~~v~~ 195 (312)
...++........++.|++.|++++||+|+++|.+|+.+++++..+....++. .....||||.+|+++|.+
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 34566777888999999999999999999999999999999988776433321 124679999999999985
No 106
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.57 E-value=2.2e-07 Score=67.02 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=59.9
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
|.++||+.++||+|.+++.+|+..|++|+.+ +++. +....++...+...+||++..++..|.++..|..||+
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~i-di~~--~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEI-PLGN--DARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEE-ECCC--ChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 3479999999999999999999999999997 6643 2223455666788899999987669999999999985
No 107
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.55 E-value=2.7e-07 Score=65.47 Aligned_cols=57 Identities=23% Similarity=0.357 Sum_probs=47.9
Q ss_pred CccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhhc
Q 021466 11 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARL 77 (312)
Q Consensus 11 ~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~~ 77 (312)
+|+|.++.+.|++.|++|+++ .. . + ...+|.|++|+|++++..+.+|..|++||.++
T Consensus 16 sp~clk~~~~Lr~~~~~~~v~-~~-~---n-----~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 16 DPECLAVLAYLKFAGAPLKVV-PS-N---N-----PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CHHHHHHHHHHHcCCCCEEEE-ec-C---C-----CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 799999999999999999986 21 1 1 13678999999998866999999999999763
No 108
>PRK10638 glutaredoxin 3; Provisional
Probab=98.44 E-value=6.7e-07 Score=65.11 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=61.2
Q ss_pred CC-eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 1 Ms-~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
|+ ++||+.+.||+|.+++.+|+..|++|+.+ +++... ...+++.+.++..+||++..++..|.+...+..+-.+
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~-dv~~~~-~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEI-PIDGDA-AKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEE-ECCCCH-HHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 66 79999999999999999999999999997 775421 1346778889999999998876688888888776654
No 109
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.25 E-value=5.2e-06 Score=58.56 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=57.7
Q ss_pred CeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
.++||+.++||+|.+++-+|+..|++|+.+ +++.. .....+.......+||++..++..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~-~v~~~--~~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEI-PLGKD--ITGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEE-ECCCC--hhHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 368999999999999999999999999987 66532 122344455677789999988779999999999984
No 110
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.20 E-value=2.9e-05 Score=58.91 Aligned_cols=112 Identities=17% Similarity=0.050 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhhhc-CCeecCCCchHHHHHHHH
Q 021466 87 SLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHLAS-NTYLVGHSVTLADIIMTC 165 (312)
Q Consensus 87 ~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L~~-~tfLvGe~~TlADi~l~~ 165 (312)
+..+||..++...|..|+|.+.-.-.--...-.........+.+...+.+.+...+..|.. ++||.|+ .||||..++.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 3568999999999999988776532111110000111233455666777788888888865 6899997 9999999999
Q ss_pred HHHHHHhhhcCccccccChhHHHHHHHHhcChhHHHHhc
Q 021466 166 NLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRKILG 204 (312)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~~~~ 204 (312)
++.++..+... --+.+..|.+++-++|+|+..+.
T Consensus 80 ml~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTYGDP-----VPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHH
Confidence 99998766432 12689999999999999998764
No 111
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.12 E-value=7.1e-06 Score=59.41 Aligned_cols=59 Identities=19% Similarity=0.258 Sum_probs=47.1
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
|.++||+.++||+|.+++.+|+..||+|+.+ +++.. ....+.....+..+||+++.++.
T Consensus 1 ~~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~i-di~~~--~~~~~~~~~~g~~~vPvv~i~~~ 59 (81)
T PRK10329 1 MRITIYTRNDCVQCHATKRAMESRGFDFEMI-NVDRV--PEAAETLRAQGFRQLPVVIAGDL 59 (81)
T ss_pred CEEEEEeCCCCHhHHHHHHHHHHCCCceEEE-ECCCC--HHHHHHHHHcCCCCcCEEEECCE
Confidence 6789999999999999999999999999997 66531 11223344568889999998775
No 112
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.06 E-value=1.3e-05 Score=56.73 Aligned_cols=68 Identities=7% Similarity=0.036 Sum_probs=54.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIAR 72 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~ 72 (312)
++||+.++||.|.+++.+|+..||+|+.+ ++... ....+++.+.++..++|++..++..|.....+.+
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~-di~~~-~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEI-NIDIF-PERKAELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEE-ECCCC-HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 68999999999999999999999999998 66541 2234577888999999999987766665555443
No 113
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.03 E-value=1.8e-05 Score=55.42 Aligned_cols=70 Identities=19% Similarity=0.177 Sum_probs=53.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCccc--ccHHHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPI--FESNAIARYV 74 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l--~eS~aI~~yL 74 (312)
++||+.++|+.|.+++.++...|++|..+ +++.. ....+++...++...||+|+.++..+ ++..+|.++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~v-di~~~-~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEI-DVEKD-SAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEE-eccCC-HHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 68999999999999999999999999987 65431 11224567788999999999874354 4555665554
No 114
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=97.96 E-value=2.6e-05 Score=54.19 Aligned_cols=69 Identities=14% Similarity=0.079 Sum_probs=55.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARY 73 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~y 73 (312)
++||+.++||+|.+++.+|+..|++|+.+ ++.... ....++...++..++|++..++..+.++..|.+.
T Consensus 2 v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~-di~~~~-~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSKSTCPYCKRAKRLLESLGIEFEEI-DILEDG-ELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCcEEEE-ECCCCH-HHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 68999999999999999999999999987 664421 1335666788999999999877688888877653
No 115
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=97.95 E-value=1.8e-05 Score=55.30 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=48.6
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPI 64 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l 64 (312)
++||+.++|+.|.+++.++...|++|..+ .++.. ....+++.+.+|.+++|+|+.++..+
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~-~i~~~-~~~~~~~~~~~~~~~vP~i~~~~~~i 61 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEV-DVDED-PEALEELKKLNGYRSVPVVVIGDEHL 61 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEE-eCCCC-HHHHHHHHHHcCCcccCEEEECCEEE
Confidence 68999999999999999999999999987 66542 12235677788999999999876544
No 116
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=4.1e-05 Score=55.23 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=50.7
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHh-CCCCcccEEEcCCcccccH
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKM-NPIGKVPVLETPDGPIFES 67 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~-~P~gkvP~L~~~~g~l~eS 67 (312)
|++++|+.++||+|.+++-+|.-.|++|+.+ .++........++... ++..+||++..++..+...
T Consensus 1 ~~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i-~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~ 67 (80)
T COG0695 1 ANVTIYTKPGCPYCKRAKRLLDRKGVDYEEI-DVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGC 67 (80)
T ss_pred CCEEEEECCCCchHHHHHHHHHHcCCCcEEE-EecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCc
Confidence 6789999999999999999999999999997 6665322122344444 4789999999988754433
No 117
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.84 E-value=7.2e-05 Score=53.01 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=48.4
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhC-CCCcccEEEcCCc-ccccH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMN-PIGKVPVLETPDG-PIFES 67 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~-P~gkvP~L~~~~g-~l~eS 67 (312)
++||+.++||.|.+++.+|...|++|+.+ +++.. ......+...+ +...||+++.++| .+.++
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~i-di~~~-~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~ 66 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWV-DIEED-EGAADRVVSVNNGNMTVPTVKFADGSFLTNP 66 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEE-eCcCC-HhHHHHHHHHhCCCceeCEEEECCCeEecCC
Confidence 68999999999999999999999999987 65432 12234455665 8899999987777 54443
No 118
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=97.79 E-value=7.3e-05 Score=52.89 Aligned_cols=71 Identities=13% Similarity=0.075 Sum_probs=54.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCC-cccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIG-KVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~g-kvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
++||+.+.||+|.+++.+|+..||+|+.+ +++.. .....++....... +||++..++..+.+...+.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i-~i~~~-~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEI-DVDGD-PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEE-ECCCC-HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 68999999999999999999999999997 66542 11223344445544 89999988778888888887653
No 119
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.64 E-value=0.00013 Score=51.38 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=44.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
++||+.++||.|.+++-+|+..||+|+.+ +++. .....+.+...+...||+++.++.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~-di~~--~~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEI-NIDE--QPEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEE-ECCC--CHHHHHHHHHcCCcccCEEEECCC
Confidence 48999999999999999999999999997 6653 122233344556778999998654
No 120
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=97.62 E-value=0.00025 Score=51.65 Aligned_cols=75 Identities=16% Similarity=0.084 Sum_probs=57.9
Q ss_pred CCeEEeecCCCccHHHHHHHHHH-----cCCCEEEEecccCCCCCCChHHHHhCCC--CcccEEEcCCcccccHHHHHHH
Q 021466 1 MPLVLHAGNTNKNAFKALITAEY-----TGVNVELVKNFEMGVTNKTPEFLKMNPI--GKVPVLETPDGPIFESNAIARY 73 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~-----~gi~~~~~~~v~~~~~~~~~~~~~~~P~--gkvP~L~~~~g~l~eS~aI~~y 73 (312)
|.+++|+.++||+|.+++-+|+. .|++|+.+ +++... ...+++...... ..||++..++..+.+...|..+
T Consensus 1 m~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~i-di~~~~-~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~ 78 (85)
T PRK11200 1 MFVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYV-DIHAEG-ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAY 78 (85)
T ss_pred CEEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEE-ECCCCh-HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHH
Confidence 78899999999999999999998 89999997 665311 112344444332 5799999876699999999999
Q ss_pred Hhhc
Q 021466 74 VARL 77 (312)
Q Consensus 74 L~~~ 77 (312)
+...
T Consensus 79 ~~~~ 82 (85)
T PRK11200 79 VKEN 82 (85)
T ss_pred HHHh
Confidence 8774
No 121
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.56 E-value=0.00023 Score=51.01 Aligned_cols=72 Identities=10% Similarity=0.018 Sum_probs=57.0
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
++||+.++||+|.+++-+|+..|++|+.+ +++... ....++.+......||++..++..+.+...+..+..+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~-di~~~~-~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEI-RVDGDP-ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEE-EecCCH-HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 47999999999999999999999999997 765421 1234555666778899999877788888888776655
No 122
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.30 E-value=0.00077 Score=47.47 Aligned_cols=55 Identities=18% Similarity=0.402 Sum_probs=45.7
Q ss_pred CCccHHHHHHHHHHcCCC---EEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc-ccccHHHHHHHH
Q 021466 10 TNKNAFKALITAEYTGVN---VELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYV 74 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~---~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g-~l~eS~aI~~yL 74 (312)
.++.|..+.+.+++.+.+ ++++ ... .+ ..+|.|++|+|.+.++ .+.+-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv-~s~------n~---~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVV-PSN------NP---WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEE-EcC------CC---CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 378999999999999999 8887 211 11 3789999999999444 999999999998
No 123
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.20 E-value=0.0019 Score=47.16 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=54.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcC-----CCEEEEecccCCCCCCChHHHHhCCC--CcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTG-----VNVELVKNFEMGVTNKTPEFLKMNPI--GKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~g-----i~~~~~~~v~~~~~~~~~~~~~~~P~--gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
+++|+.++||+|.+++-+|+..+ ++|+.+ ++.... ....++....-. ..||++..++..+.++..|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~i-di~~~~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYI-DIHAEG-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEE-ECCCCH-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 48999999999999999999884 567776 554211 112345444433 589999887779999999999987
Q ss_pred hc
Q 021466 76 RL 77 (312)
Q Consensus 76 ~~ 77 (312)
+.
T Consensus 80 ~~ 81 (86)
T TIGR02183 80 EN 81 (86)
T ss_pred hc
Confidence 74
No 124
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.05 E-value=0.0028 Score=47.62 Aligned_cols=72 Identities=8% Similarity=-0.005 Sum_probs=53.9
Q ss_pred CeEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCC--CChHHHHhCCCCcccEEEcCCcccccHHHHHHHH
Q 021466 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTN--KTPEFLKMNPIGKVPVLETPDGPIFESNAIARYV 74 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~--~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL 74 (312)
++++|+-++||+|.+++-+|.-.|++|+.+ +++..... ....+...+...+||.+..++..|.+...+....
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~v-did~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVH-EIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEE-EcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHHH
Confidence 479999999999999999999999999997 77642110 1123445567789999987766777777666644
No 125
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.05 E-value=0.00064 Score=45.88 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=44.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~ 61 (312)
++||+.++||.|.+++-+|+..|++|+.+ +++... ....++.+.+...++|++..++
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~-dv~~~~-~~~~~l~~~~g~~~~P~v~i~g 57 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEV-DVDEDE-EAREELKELSGVRTVPQVFIDG 57 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEE-EGGGSH-HHHHHHHHHHSSSSSSEEEETT
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEc-ccccch-hHHHHHHHHcCCCccCEEEECC
Confidence 47999999999999999999999999998 776521 2233444556778999998754
No 126
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.04 E-value=0.0084 Score=47.35 Aligned_cols=68 Identities=24% Similarity=0.327 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 127 EEAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 127 ~~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
......+++..|..|+..|.......| ++|+.||.+|+.|.. ++.+-+-.|. |+|..|+++|+..-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~-Ltivkgi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRS-LTIVKGIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHH-HCTCTTS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhh-hhhccCCcCC---HHHHHHHHHHHHHcCC
Confidence 345667788888888888886666666 899999999999874 4555553333 7999999999976554
No 127
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=96.84 E-value=0.0058 Score=43.67 Aligned_cols=73 Identities=11% Similarity=0.034 Sum_probs=56.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCC--ChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNK--TPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~--~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+++|+.++||+|.+++-++...+++|+.. +++...... .....+.+...++|++..++..+.++..|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVV-ELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEE-EEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 58999999999999999999999999987 666522100 12344556667899998876689999999888765
No 128
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=96.51 E-value=0.018 Score=41.13 Aligned_cols=73 Identities=12% Similarity=0.013 Sum_probs=54.9
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCC--EEEEecccCCCCCC--ChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVN--VELVKNFEMGVTNK--TPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~--~~~~~~v~~~~~~~--~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+++|+-++||+|.+++-++.-.+++ |+.+ +++...... ............+|.+..++..+.++..+..+..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~-~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVV-ELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEE-EeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 3789999999999999999999999 8776 665421100 11244556667899998877789999888887765
No 129
>PHA03050 glutaredoxin; Provisional
Probab=96.51 E-value=0.0082 Score=45.85 Aligned_cols=69 Identities=13% Similarity=-0.012 Sum_probs=51.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCC---CEEEEecccCCCC--CCChHHHHhCCCCcccEEEcCCcccccHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGV---NVELVKNFEMGVT--NKTPEFLKMNPIGKVPVLETPDGPIFESNAIAR 72 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi---~~~~~~~v~~~~~--~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~ 72 (312)
+++|..++||+|.+++-+|+..|+ +|+.+ +++.... ....++.+.+...+||.+..++..|.....+..
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i-~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIV-DIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEE-ECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 689999999999999999999999 78886 6653111 113456667777899999887667666665555
No 130
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.13 E-value=0.02 Score=44.88 Aligned_cols=67 Identities=22% Similarity=0.308 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 128 EAAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 128 ~~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
.....+++..|..|+..+..... ++..+|+.||.+|+.|.. ++.+-+-.|. |+|.+|+++|++...|
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~-Lt~vkgi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRN-LTLVKGLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhh-hhhhcCCCCC---HHHHHHHHHHHHHhCC
Confidence 35556788888888888855555 455799999999999874 4545553332 7999999999976543
No 131
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=96.07 E-value=0.025 Score=42.24 Aligned_cols=71 Identities=14% Similarity=0.054 Sum_probs=50.1
Q ss_pred eEEeec-----CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~-----~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
+.||.- +.||+|.+++-+|...|++|+.+ ++... .....+....+...+||.+..++..|.+...+.....
T Consensus 14 Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~-di~~~-~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 14 VVLYMKGTPQFPQCGFSARAVQILKACGVPFAYV-NVLED-PEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMYQ 89 (97)
T ss_pred EEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEE-ECCCC-HHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHHH
Confidence 456743 78999999999999999999987 66421 1112234456667799999887667777666665443
No 132
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=96.04 E-value=0.028 Score=41.32 Aligned_cols=71 Identities=10% Similarity=0.025 Sum_probs=51.2
Q ss_pred eEEeec-----CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 3 ~~Ly~~-----~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
+++|.. +.||+|.+++-+|...|++|+.+ ++... .....+..+.+...++|++..++..|.+...+.....
T Consensus 10 vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~i-dv~~~-~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 10 VVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTF-DILED-EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMHE 85 (90)
T ss_pred EEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEE-EcCCC-HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHHH
Confidence 567754 58999999999999999999998 66431 1112344455667789999876657777777776543
No 133
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=95.12 E-value=0.07 Score=50.67 Aligned_cols=69 Identities=14% Similarity=0.037 Sum_probs=50.9
Q ss_pred CC-eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHH---------hCCCCcccEEEcCCcccccHHHH
Q 021466 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLK---------MNPIGKVPVLETPDGPIFESNAI 70 (312)
Q Consensus 1 Ms-~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~---------~~P~gkvP~L~~~~g~l~eS~aI 70 (312)
|. +++|+-++||+|.+++-+|...||+|+.+ +++- .....++.. .+...+||++..++..|.+-..+
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~i-di~~--~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l 77 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQI-SLDD--DVKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNL 77 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEE-ECCC--ChhHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHH
Confidence 65 79999999999999999999999999997 7652 111122221 24566899998877766666665
Q ss_pred HH
Q 021466 71 AR 72 (312)
Q Consensus 71 ~~ 72 (312)
..
T Consensus 78 ~~ 79 (410)
T PRK12759 78 MA 79 (410)
T ss_pred HH
Confidence 54
No 134
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=94.81 E-value=0.039 Score=42.73 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=30.9
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
|+++||+.+.|.-|++++-.++..||+|+++ ++
T Consensus 1 ~~itiy~~p~C~t~rka~~~L~~~gi~~~~~-~y 33 (117)
T COG1393 1 MMITIYGNPNCSTCRKALAWLEEHGIEYTFI-DY 33 (117)
T ss_pred CeEEEEeCCCChHHHHHHHHHHHcCCCcEEE-Ee
Confidence 7899999999999999999999999999997 44
No 135
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=94.70 E-value=0.04 Score=47.16 Aligned_cols=60 Identities=18% Similarity=0.371 Sum_probs=49.0
Q ss_pred HHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHH
Q 021466 135 KRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRK 201 (312)
Q Consensus 135 ~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~ 201 (312)
...++.|+.+|.+.+|..|..++-+|+.+|..+.- ......++|..||+.++.++-.+..
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~-------ep~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV-------EPQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc-------CcchhhhhHHHHHHHHHHHHHHHHh
Confidence 46788899999999999999999999999888741 1224578899999999988766654
No 136
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=94.66 E-value=0.11 Score=36.21 Aligned_cols=64 Identities=25% Similarity=0.311 Sum_probs=47.4
Q ss_pred CCe-EEeecCCCccHHHHHHHHHHcCCCEEEEecccCCC---------CCCChHHHH--hCCCCcccEEEcCCc-ccc
Q 021466 1 MPL-VLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGV---------TNKTPEFLK--MNPIGKVPVLETPDG-PIF 65 (312)
Q Consensus 1 Ms~-~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~---------~~~~~~~~~--~~P~gkvP~L~~~~g-~l~ 65 (312)
||. +||+...||-|....-.++-.+++|+.+ ++..+. .+..++|-+ .+-+--+|+|.++|| ++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~V-eIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFV-EITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceee-ehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 774 9999999999999999999999999998 764322 123344443 333446899999999 444
No 137
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=94.59 E-value=0.13 Score=41.57 Aligned_cols=71 Identities=13% Similarity=0.046 Sum_probs=51.9
Q ss_pred eEEeecC------CCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCC----CcccEEEcCCcccccHHHHHH
Q 021466 3 LVLHAGN------TNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPI----GKVPVLETPDGPIFESNAIAR 72 (312)
Q Consensus 3 ~~Ly~~~------~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~----gkvP~L~~~~g~l~eS~aI~~ 72 (312)
++||..+ .+++|.+++.+|+-.||+|+.+ ++++.. ....+..+.... .+||.+-.++..|.....|.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~-DVs~~~-~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDER-DVSMDS-GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEE-ECCCCH-HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 5789888 7999999999999999999997 776521 112334444433 689999887767777777766
Q ss_pred HHh
Q 021466 73 YVA 75 (312)
Q Consensus 73 yL~ 75 (312)
.-.
T Consensus 80 L~e 82 (147)
T cd03031 80 LNE 82 (147)
T ss_pred HHH
Confidence 443
No 138
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=94.54 E-value=0.058 Score=41.60 Aligned_cols=31 Identities=19% Similarity=0.050 Sum_probs=29.2
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
++||+.+.|+.|.+++-.|+..|++|+.+ ++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~i-di 32 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEER-NL 32 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEE-ec
Confidence 79999999999999999999999999998 55
No 139
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=94.44 E-value=0.055 Score=42.82 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=29.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEeccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~ 35 (312)
++||+.+.|+.|.+++-+|+..||+|+.+ ++.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~i-di~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTER-NIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEe-ecc
Confidence 89999999999999999999999999998 553
No 140
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=93.65 E-value=0.27 Score=33.44 Aligned_cols=55 Identities=13% Similarity=0.176 Sum_probs=39.3
Q ss_pred eEEeecCCCccHHHHHHHHHHc-----CCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcc
Q 021466 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP 63 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~-----gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~ 63 (312)
+++|+.++||.|.+++-+++.. ++++..+ +++ ..++....+-...+|++..++..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~i-d~~-----~~~~l~~~~~i~~vPti~i~~~~ 62 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMI-DAA-----EFPDLADEYGVMSVPAIVINGKV 62 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEE-Ecc-----cCHhHHHHcCCcccCEEEECCEE
Confidence 6899999999999998887755 5666554 332 23455566666689999987653
No 141
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=93.59 E-value=0.11 Score=41.24 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=29.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEeccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~ 35 (312)
++||+.+.|+.|++++-.|+..||+|+++ ++.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~-d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQ-NLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEE-ECC
Confidence 89999999999999999999999999998 553
No 142
>PRK10026 arsenate reductase; Provisional
Probab=93.38 E-value=0.12 Score=41.32 Aligned_cols=33 Identities=9% Similarity=0.229 Sum_probs=30.4
Q ss_pred CC-eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 1 MP-LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 1 Ms-~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
|+ ++||+++.|.-|++++-.|+..|++|+++ ++
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~-d~ 34 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTII-HY 34 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEE-ee
Confidence 76 79999999999999999999999999998 54
No 143
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=93.29 E-value=0.12 Score=39.52 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=29.3
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEeccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~ 35 (312)
++||+.+.|+.|.+++-+|+..|++|+.+ ++.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAI-DIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEe-ccc
Confidence 58999999999999999999999999998 554
No 144
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=93.16 E-value=0.58 Score=36.14 Aligned_cols=49 Identities=31% Similarity=0.477 Sum_probs=20.9
Q ss_pred HHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEE-EcCCc-ccccHHHHHHHHhhcc
Q 021466 14 AFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVL-ETPDG-PIFESNAIARYVARLK 78 (312)
Q Consensus 14 ~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L-~~~~g-~l~eS~aI~~yL~~~~ 78 (312)
..++-+++++..=.+++. +. .-...|.| ...+| .|+|++||++||.+-+
T Consensus 12 NLKlalA~~~~~~~lk~~--v~--------------ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF 62 (122)
T PF09635_consen 12 NLKLALALEYAQKDLKLE--VN--------------EDESGPLLKDKKSGFELFEPNAIVRYLANDF 62 (122)
T ss_dssp HHHHHHHHHH--STT--E--E---------------SS--S--EEE-S--S----HHHHHHHHTT--
T ss_pred HHHHHHHHHHhCCCCeee--eC--------------CccccceeeecCCceEEecccHHHHHHHhhc
Confidence 356777777765444443 11 11123677 55666 9999999999999843
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=92.95 E-value=0.16 Score=40.18 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=29.6
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEeccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~ 35 (312)
+++|+.+.|+.|.+++-+|+..|++|+.+ ++.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~-di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEK-NIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEE-Eee
Confidence 79999999999999999999999999997 553
No 146
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=92.72 E-value=0.16 Score=38.35 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=29.2
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEeccc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFE 35 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~ 35 (312)
++||+.+.|+.|.+++-+|+..|++|+.+ ++.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFI-DYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEE-eec
Confidence 48999999999999999999999999997 553
No 147
>PRK10853 putative reductase; Provisional
Probab=92.40 E-value=0.18 Score=39.05 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=29.2
Q ss_pred CeEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
+++||+.+.|.-|++++-.|+..|++|+++ ++
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~-d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFH-DY 32 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEe-eh
Confidence 189999999999999999999999999997 54
No 148
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=91.86 E-value=0.24 Score=38.27 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=28.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
++||+.++|+.|.+++-+|+..|++|+.+ ++
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~i-di 31 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFI-DI 31 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEE-ec
Confidence 48999999999999999999999999997 55
No 149
>PRK10824 glutaredoxin-4; Provisional
Probab=91.58 E-value=0.7 Score=35.62 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=50.4
Q ss_pred eEEeec-----CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAG-----NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~-----~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
+.+|.- +.||+|.+++-+|.-.|++|..+ ++... ......+...+-..+||-+-.++..|.++..+.....+
T Consensus 17 Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~i-di~~d-~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 17 ILLYMKGSPKLPSCGFSAQAVQALSACGERFAYV-DILQN-PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQR 93 (115)
T ss_pred EEEEECCCCCCCCCchHHHHHHHHHHcCCCceEE-EecCC-HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHHHC
Confidence 355643 47999999999999999999987 66431 11223445666677999988776677777666664433
No 150
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=91.10 E-value=0.33 Score=36.73 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=28.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
+++|+.+.|+.|++++-.|+..|++|+++ ++
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~-di 31 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFH-DY 31 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEE-ec
Confidence 58999999999999999999999999998 54
No 151
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=91.06 E-value=1.1 Score=31.53 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=39.1
Q ss_pred CCeEEeecCCCccHHHH----HHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 1 MPLVLHAGNTNKNAFKA----LITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v----~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
|.+++|. ++||.|..+ .-+++..|+.++++ .++. .......-...+|+|..++.
T Consensus 1 m~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~-~v~~------~~~a~~~~v~~vPti~i~G~ 58 (76)
T TIGR00412 1 MKIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFE-KVTD------MNEILEAGVTATPGVAVDGE 58 (76)
T ss_pred CEEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEE-EeCC------HHHHHHcCCCcCCEEEECCE
Confidence 6678887 899999998 56788889988887 5541 22233445678999999443
No 152
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=90.83 E-value=1.8 Score=30.89 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=38.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcC--CCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTG--VNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~g--i~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~ 61 (312)
++||+-++|+-|..+..++.... .++++. .++. ..+++...+.- -.||||..++
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~-~vDI---~~d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELE-EVDI---DEDPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEE-EEET---TTTHHHHHHSC-TSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEE-EEEC---CCCHHHHHHhc-CCCCEEEEcC
Confidence 68999999999999998888543 345554 5555 24556666654 4899999888
No 153
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=90.54 E-value=0.39 Score=36.91 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=28.8
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
++||+.+.|..|++++-.|+..|++|+++ ++
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~-d~ 32 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVR-DL 32 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEe-eh
Confidence 68999999999999999999999999997 54
No 154
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=87.91 E-value=0.77 Score=36.01 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=29.2
Q ss_pred CeEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 2 PLVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 2 s~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
.++||+++.|.-|++++-.|+..||+|+++ ++
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~-d~ 33 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQ-DI 33 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEE-ec
Confidence 368999999999999999999999999998 44
No 155
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=87.67 E-value=5.5 Score=27.76 Aligned_cols=55 Identities=20% Similarity=0.118 Sum_probs=37.3
Q ss_pred eEEeecCCCccHHHHHHHHH----HcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCC
Q 021466 3 LVLHAGNTNKNAFKALITAE----YTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~----~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~ 61 (312)
++||+.++|+.|..+.-.++ ..+..+.+. .++. +...+.........+|++..++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~-~vd~---~~~~~~~~~~~v~~vPt~~~~g 61 (82)
T TIGR00411 3 IELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVE-YINV---MENPQKAMEYGIMAVPAIVING 61 (82)
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCceEEE-EEeC---ccCHHHHHHcCCccCCEEEECC
Confidence 57999999999998876654 345445554 5554 2344555666677899999844
No 156
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=87.13 E-value=0.93 Score=34.66 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=28.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
++||+.+.|.-|++++-.|+..|++|+++ ++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~-di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIV-EY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEE-ec
Confidence 58999999999999999999999999997 54
No 157
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=87.12 E-value=1.9 Score=27.44 Aligned_cols=55 Identities=22% Similarity=0.118 Sum_probs=36.4
Q ss_pred EEeecCCCccHHHHHHHHH-----HcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCC
Q 021466 4 VLHAGNTNKNAFKALITAE-----YTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPD 61 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l~-----~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~ 61 (312)
.+|+...|+.|.+.+..+. ..++.+..+ .++. ..........++...+|+++..+
T Consensus 2 ~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~~~~~~ 61 (69)
T cd01659 2 VLFYAPWCPFCQALRPVLAELALLNKGVKFEAV-DVDE--DPALEKELKRYGVGGVPTLVVFG 61 (69)
T ss_pred EEEECCCChhHHhhhhHHHHHHhhCCCcEEEEE-EcCC--ChHHhhHHHhCCCccccEEEEEe
Confidence 5677788999999998888 455555554 3322 22222223578889999998654
No 158
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=87.00 E-value=0.97 Score=34.71 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=28.6
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNF 34 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v 34 (312)
++||+.+.|.-|++++-.|+..|++|+++ ++
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~-di 31 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVV-KY 31 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEE-ec
Confidence 58999999999999999999999999997 54
No 159
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=86.99 E-value=2.7 Score=31.71 Aligned_cols=71 Identities=15% Similarity=0.113 Sum_probs=52.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHH----HHhCCCCcccEEEcCCcccccHHHHHHHHhh
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEF----LKMNPIGKVPVLETPDGPIFESNAIARYVAR 76 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~----~~~~P~gkvP~L~~~~g~l~eS~aI~~yL~~ 76 (312)
..+|.-..||+|.+++-++.-.|+.+.++ +++... ...++ ....-..+||.+-.++..|.....|..+-.+
T Consensus 16 VVifSKs~C~~c~~~k~ll~~~~v~~~vv-ELD~~~--~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 16 VVIFSKSSCPYCHRAKELLSDLGVNPKVV-ELDEDE--DGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred EEEEECCcCchHHHHHHHHHhCCCCCEEE-EccCCC--CcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHHc
Confidence 47788889999999999999999999998 776532 22222 2344455899998877777888877776544
No 160
>PTZ00062 glutaredoxin; Provisional
Probab=86.92 E-value=2.3 Score=36.26 Aligned_cols=63 Identities=14% Similarity=0.020 Sum_probs=44.7
Q ss_pred CCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcccccHHHHHHH
Q 021466 9 NTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARY 73 (312)
Q Consensus 9 ~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~eS~aI~~y 73 (312)
+.||+|.+++-+|...||+|... ++... ..........+...+||.+..++..|.+...+...
T Consensus 126 p~C~~C~~~k~~L~~~~i~y~~~-DI~~d-~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 126 PFCRFSNAVVNMLNSSGVKYETY-NIFED-PDLREELKVYSNWPTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred CCChhHHHHHHHHHHcCCCEEEE-EcCCC-HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 57999999999999999999987 66431 11123344556667899999876666666655553
No 161
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=85.47 E-value=1.9 Score=35.66 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhhcC---CeecCCC-chHHHHHHHHHHHHH
Q 021466 134 LKRALAALNTHLASN---TYLVGHS-VTLADIIMTCNLTLG 170 (312)
Q Consensus 134 l~~~L~~Le~~L~~~---tfLvGe~-~TlADi~l~~~l~~~ 170 (312)
-.+++..|++.|+.. .|+.|+. +|-.||.+++.|.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 456788889999988 9999987 999999999998854
No 162
>PHA02125 thioredoxin-like protein
Probab=85.01 E-value=2.8 Score=29.29 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=37.1
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET 59 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~ 59 (312)
+.+|+.++|+.|..+.-.++ ++.+... .++. +...+....+-...+|+++.
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~-~vd~---~~~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYV-DVDT---DEGVELTAKHHIRSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEE-eeeC---CCCHHHHHHcCCceeCeEEC
Confidence 68889899999998877665 3455554 5554 33567777777889999984
No 163
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=83.96 E-value=3.3 Score=29.04 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=36.8
Q ss_pred CCeEEeecCCCccHHHHHH----HHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 1 MPLVLHAGNTNKNAFKALI----TAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~----~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
|.++++ .++|+.|..+.- ++...|+.++++ ++ .........-...+|+++.++.
T Consensus 1 m~I~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~-~~------~~~~~~~~ygv~~vPalvIng~ 58 (76)
T PF13192_consen 1 MKIKVF-SPGCPYCPELVQLLKEAAEELGIEVEII-DI------EDFEEIEKYGVMSVPALVINGK 58 (76)
T ss_dssp EEEEEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEE-ET------TTHHHHHHTT-SSSSEEEETTE
T ss_pred CEEEEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEE-Ec------cCHHHHHHcCCCCCCEEEECCE
Confidence 667774 467999996654 566778888776 32 2233336777889999998766
No 164
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=82.86 E-value=6.5 Score=28.93 Aligned_cols=68 Identities=15% Similarity=0.059 Sum_probs=44.8
Q ss_pred eEEeecCCC------ccHHHHHHHHHHcCCCEEEEecccCCCCCCChHHHHhCC----CCcccEEEcCCcccccHHHHHH
Q 021466 3 LVLHAGNTN------KNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNP----IGKVPVLETPDGPIFESNAIAR 72 (312)
Q Consensus 3 ~~Ly~~~~~------~~~~~v~~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P----~gkvP~L~~~~g~l~eS~aI~~ 72 (312)
++||+...+ -+|+.++.+|+-+||+|+.+ +++... ....+..+..+ ...||-+-.++..|.+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~ei-DI~~d~-~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEV-DISMNE-ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEE-ecCCCH-HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 577775543 25888899999999999998 776532 22334445544 3678966655556666655544
No 165
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=78.78 E-value=7 Score=28.42 Aligned_cols=54 Identities=9% Similarity=0.038 Sum_probs=37.5
Q ss_pred eEEeecCCCccHHHHHHHHHHc-----CCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~-----gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
+.+|..++|++|..+.-+++.. ++.+..+ +++ ..++.........+|+++.++.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~v-d~~-----~~~e~a~~~~V~~vPt~vidG~ 74 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMI-DGA-----LFQDEVEERGIMSVPAIFLNGE 74 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEE-EhH-----hCHHHHHHcCCccCCEEEECCE
Confidence 5788889999999887654333 6777765 432 3455666777778999987543
No 166
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=78.57 E-value=4.2 Score=30.40 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=24.7
Q ss_pred CCeEEeecCCCc------cHHHHHHHHHHcCCCEEEEecccC
Q 021466 1 MPLVLHAGNTNK------NAFKALITAEYTGVNVELVKNFEM 36 (312)
Q Consensus 1 Ms~~Ly~~~~~~------~~~~v~~~l~~~gi~~~~~~~v~~ 36 (312)
|.+++|+...++ +.+++..+|+.++|+|+.+ ++..
T Consensus 1 m~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~v-DIa~ 41 (99)
T PF04908_consen 1 MVIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEV-DIAM 41 (99)
T ss_dssp -SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEE-ETTT
T ss_pred CEEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEE-eCcC
Confidence 889999866543 5788899999999999998 7655
No 167
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=77.10 E-value=1.2 Score=33.97 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=24.1
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCC
Q 021466 260 PKPKNPLDLLPPSKMILDEWKRLYSNT 286 (312)
Q Consensus 260 ~k~k~pl~~l~~~~f~ld~~kr~ysn~ 286 (312)
+|+|.|.|.+|=-..+++|||+.|-+.
T Consensus 1 ~~kk~p~d~~~wqeyd~eEFkkkfP~L 27 (128)
T PF09868_consen 1 KKKKKPIDEFPWQEYDIEEFKKKFPAL 27 (128)
T ss_pred CCCcCcccccchhHhhHHHHHHHhHHH
Confidence 367899999999999999999999874
No 168
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=75.89 E-value=9.3 Score=26.67 Aligned_cols=63 Identities=17% Similarity=0.363 Sum_probs=38.0
Q ss_pred cHHHHHHHHhhccCC--CCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHH
Q 021466 66 ESNAIARYVARLKAD--NPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNT 143 (312)
Q Consensus 66 eS~aI~~yL~~~~~~--~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~ 143 (312)
|..-|+.++..-||. ..+.+.+. +..|+.|.+...+. ....+...|.+
T Consensus 5 E~~~ll~~I~~aYP~~~~~f~~~~~--k~~v~~W~~~L~d~----------------------------~ye~v~~al~~ 54 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAGNFKPTDS--KETVDLWYDMLKDY----------------------------DYEIVMKALKK 54 (71)
T ss_dssp HHHHHHHHHHHHST---TT---STH--HHHHHHHHHHHTTS-----------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcchhccchhhH--HHHHHHHHHHHHhC----------------------------CHHHHHHHHHH
Confidence 567789999998883 34444443 56789998888651 33445556777
Q ss_pred hhhcCCeecCCCchHHHHH
Q 021466 144 HLASNTYLVGHSVTLADII 162 (312)
Q Consensus 144 ~L~~~tfLvGe~~TlADi~ 162 (312)
++.++.| -||+|||.
T Consensus 55 ~i~~~kf----PPsiaeii 69 (71)
T PF11417_consen 55 HIATNKF----PPSIAEII 69 (71)
T ss_dssp HHHH-SS-------GGGG-
T ss_pred HHHhCCC----CcCHHHHh
Confidence 7777777 58888874
No 169
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=67.12 E-value=6.4 Score=29.97 Aligned_cols=66 Identities=15% Similarity=0.143 Sum_probs=39.0
Q ss_pred CccHHHHHHHHHHcC---CCEEEEecccCCCCCCChHHHHh-C-CCCcccEEEcCCc--------------ccccHHHHH
Q 021466 11 NKNAFKALITAEYTG---VNVELVKNFEMGVTNKTPEFLKM-N-PIGKVPVLETPDG--------------PIFESNAIA 71 (312)
Q Consensus 11 ~~~~~~v~~~l~~~g---i~~~~~~~v~~~~~~~~~~~~~~-~-P~gkvP~L~~~~g--------------~l~eS~aI~ 71 (312)
||.|..+.-+|+..- -.++++ .|++.. -.....+. - -....|+|+.++| .|.++..|+
T Consensus 24 Cp~c~~iEGlLa~~P~l~~~ldV~-rV~f~R--PR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~ 100 (112)
T PF11287_consen 24 CPHCAAIEGLLASFPDLRERLDVR-RVDFPR--PRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRIL 100 (112)
T ss_pred CCchHHHHhHHhhChhhhhcccEE-EeCCCC--chHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHH
Confidence 677777776665431 123333 334311 11222222 1 1456899997655 488999999
Q ss_pred HHHhhccC
Q 021466 72 RYVARLKA 79 (312)
Q Consensus 72 ~yL~~~~~ 79 (312)
+||+++|+
T Consensus 101 ~~La~r~g 108 (112)
T PF11287_consen 101 RYLAERHG 108 (112)
T ss_pred HHHHHHcC
Confidence 99999875
No 170
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=66.95 E-value=6.7 Score=29.64 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=20.9
Q ss_pred eecCCCccHHHHHHHHHHcCCCEEEE
Q 021466 6 HAGNTNKNAFKALITAEYTGVNVELV 31 (312)
Q Consensus 6 y~~~~~~~~~~v~~~l~~~gi~~~~~ 31 (312)
|+.+.|.-|++++-.|+..|++|+++
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~ 26 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFI 26 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEE
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEee
Confidence 78899999999999999999999997
No 171
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=49.52 E-value=2.5 Score=36.61 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHhhhcCCeecCCCchHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHH-HhcChhHHHHhcccc
Q 021466 129 AAIASLKRALAALNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWT-MVNIPNFRKILGEIK 207 (312)
Q Consensus 129 ~~~~~l~~~L~~Le~~L~~~tfLvGe~~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~-v~~~p~~~~~~~~~~ 207 (312)
..+..+..+|...+..|...++ .+++++|+.+...+...........++..++++.+|+.+ ....+ .+.+++|..
T Consensus 91 ~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~ 166 (226)
T KOG0867|consen 91 KERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHH
Confidence 5566778888888888887777 789999977777655555555555667788999999988 33334 777788887
Q ss_pred ccc
Q 021466 208 QAE 210 (312)
Q Consensus 208 ~~~ 210 (312)
++.
T Consensus 167 ~~~ 169 (226)
T KOG0867|consen 167 LAS 169 (226)
T ss_pred Hhh
Confidence 776
No 172
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=39.73 E-value=81 Score=23.65 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=41.0
Q ss_pred cCCCccHHHHHHHHHHcC-CCEEEEecccCCCCCCChHHHHh----CCCCcccEEEcCCcccccHHHHHHHHh
Q 021466 8 GNTNKNAFKALITAEYTG-VNVELVKNFEMGVTNKTPEFLKM----NPIGKVPVLETPDGPIFESNAIARYVA 75 (312)
Q Consensus 8 ~~~~~~~~~v~~~l~~~g-i~~~~~~~v~~~~~~~~~~~~~~----~P~gkvP~L~~~~g~l~eS~aI~~yL~ 75 (312)
+|.|+++.++.-+|...| ++|..+ +|- .+++.++. +-=-++|-|-.++.-+..|.-|.+...
T Consensus 27 ~P~CGFS~~~vqiL~~~g~v~~~~v-nVL-----~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~q 93 (105)
T COG0278 27 FPQCGFSAQAVQILSACGVVDFAYV-DVL-----QDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMYQ 93 (105)
T ss_pred CCCCCccHHHHHHHHHcCCcceeEE-eec-----cCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHHH
Confidence 567999999999999999 677665 442 34555532 333477877765556666665555443
No 173
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=38.05 E-value=1.2e+02 Score=21.40 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=35.4
Q ss_pred eEEeecCCCccHHHHH-----HHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEc
Q 021466 3 LVLHAGNTNKNAFKAL-----ITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET 59 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~-----~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~ 59 (312)
+.+++.++|+.|.... ++..+.+ ++.+. .++. .....+....-...+|.+..
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~-~vd~---~~~~~l~~~~~v~~~Pt~~~ 77 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFA-KVDC---DENKELCKKYGVKSVPTIIF 77 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEE-EEET---TTSHHHHHHTTCSSSSEEEE
T ss_pred EEEEeCCCCCccccccceeccccccccc-ccccc-hhhh---hccchhhhccCCCCCCEEEE
Confidence 3566778899998876 3334443 56665 5555 34577778888889998864
No 174
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=37.23 E-value=74 Score=31.51 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=39.2
Q ss_pred eEEeecCCCccHHHHHH----HHHHc-CCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 3 LVLHAGNTNKNAFKALI----TAEYT-GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~----~l~~~-gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
+++|..++||+|-.+.- ++... +|..+++ +.. ..++..+......||.++.++.
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i-~~~-----~~~~~~~~~~v~~vP~~~i~~~ 538 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMI-DVS-----HFPDLKDEYGIMSVPAIVVDDQ 538 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEE-ECc-----ccHHHHHhCCceecCEEEECCE
Confidence 57888889999877654 45555 7888886 432 3456666777889999998876
No 175
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=33.30 E-value=1.2e+02 Score=20.82 Aligned_cols=46 Identities=26% Similarity=0.540 Sum_probs=29.4
Q ss_pred cccEEEcCCcccccHHHHHHHHhhccCCCCCCC---------CCHHHHHHHHHHHH
Q 021466 53 KVPVLETPDGPIFESNAIARYVARLKADNPLLG---------SSLIDSAHIEQWID 99 (312)
Q Consensus 53 kvP~L~~~~g~l~eS~aI~~yL~~~~~~~~L~g---------~~~~e~a~v~~w~~ 99 (312)
+=||+. ++|..+|-.+|.+||.......++-+ .+..-+..|++|+.
T Consensus 15 ~dPVi~-~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~ 69 (73)
T PF04564_consen 15 RDPVIL-PSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCA 69 (73)
T ss_dssp SSEEEE-TTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHH
T ss_pred hCceeC-CcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHH
Confidence 347875 67799999999999998332222221 13455777777764
No 176
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=33.17 E-value=33 Score=33.56 Aligned_cols=68 Identities=7% Similarity=0.008 Sum_probs=43.6
Q ss_pred eEEeecCCCccHHHHHHHHHHc-----CCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCccccc----HHHHHHH
Q 021466 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFE----SNAIARY 73 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~-----gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~l~e----S~aI~~y 73 (312)
+++|+.+.||+|-.+.-+++.. +|..+.+ +. ...++.....-...||.+..++..+++ -..|+..
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~i---d~---~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~ 193 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTMI---DG---ALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAK 193 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEE---Ec---hhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHH
Confidence 6889889999998876554333 3333333 22 455677777778899999987653332 2345555
Q ss_pred Hhh
Q 021466 74 VAR 76 (312)
Q Consensus 74 L~~ 76 (312)
|.+
T Consensus 194 ~~~ 196 (517)
T PRK15317 194 LDT 196 (517)
T ss_pred Hhc
Confidence 554
No 177
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala. N-terminal acetylation plays a role in normal eukaryotic translation and processing, protect against proteolytic degradation and protein turnover. NAT1 anchors ARD1 and NAT5 to the ribosome and may present the N- terminal of nascent polypeptides for acetylation [], [].
Probab=32.73 E-value=10 Score=37.26 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=17.4
Q ss_pred ccChhHHHHHHHHhcChhHHHHh
Q 021466 181 SEFPHIERYFWTMVNIPNFRKIL 203 (312)
Q Consensus 181 ~~~P~l~rw~~~v~~~p~~~~~~ 203 (312)
..|-.+.||-+++..+|.+..+.
T Consensus 356 r~Y~~~L~~ed~l~~~~~y~raa 378 (517)
T PF12569_consen 356 RAYVDMLRWEDKLRSHPFYRRAA 378 (517)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHH
Confidence 35677888888888888776654
No 178
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=31.26 E-value=38 Score=33.15 Aligned_cols=55 Identities=9% Similarity=0.028 Sum_probs=37.6
Q ss_pred eEEeecCCCccHHHHHHHHHHc-----CCCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCcc
Q 021466 3 LVLHAGNTNKNAFKALITAEYT-----GVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP 63 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~-----gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g~ 63 (312)
+++|..+.||+|-.+.-+++.. +|..+.+ + ....++.........||.+..++..
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~i---d---~~~~~~~~~~~~v~~VP~~~i~~~~ 180 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMI---D---GALFQDEVEALGIQGVPAVFLNGEE 180 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEE---E---chhCHHHHHhcCCcccCEEEECCcE
Confidence 5788889999998876655433 3444333 2 2345677777778899999887653
No 179
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=30.93 E-value=2.4e+02 Score=21.52 Aligned_cols=58 Identities=16% Similarity=0.040 Sum_probs=31.9
Q ss_pred EEeecCCCccHHHHHHH----HHHcCCCEEEEecccCCC--CCCC----hHHHHhCC----CCcccEEEc-CCc
Q 021466 4 VLHAGNTNKNAFKALIT----AEYTGVNVELVKNFEMGV--TNKT----PEFLKMNP----IGKVPVLET-PDG 62 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~----l~~~gi~~~~~~~v~~~~--~~~~----~~~~~~~P----~gkvP~L~~-~~g 62 (312)
..|+.++||.|+...=. ++..++++-.+ +++... +... .+|..... ...+|+|+. .+|
T Consensus 28 v~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~v-dvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~G 100 (122)
T TIGR01295 28 FFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYI-DSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDG 100 (122)
T ss_pred EEEECCCChhHHHHhHHHHHHHHhcCCcEEEE-ECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCC
Confidence 45677889999985433 34455666665 554311 1111 24555543 344998864 344
No 180
>PRK13808 adenylate kinase; Provisional
Probab=28.69 E-value=4.5e+02 Score=24.28 Aligned_cols=30 Identities=17% Similarity=0.059 Sum_probs=25.8
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEE
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVEL 30 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~ 30 (312)
|-+.|++.++++.+-.++.+++.+|+.+-.
T Consensus 1 mrIiv~GpPGSGK~T~a~~LA~~ygl~~is 30 (333)
T PRK13808 1 MRLILLGPPGAGKGTQAQRLVQQYGIVQLS 30 (333)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 668899999999999999999999986544
No 181
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=28.68 E-value=1.7e+02 Score=21.98 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=32.0
Q ss_pred EEe-ecCCCccHHHHHHHHHHcCC---CEEEEecccCCCCCCChHHHHhCCCCcccEEEc
Q 021466 4 VLH-AGNTNKNAFKALITAEYTGV---NVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET 59 (312)
Q Consensus 4 ~Ly-~~~~~~~~~~v~~~l~~~gi---~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~ 59 (312)
.++ +.++|+.|..++-+++...- .+++. .++. +..++.........+|++..
T Consensus 26 vv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~-~vd~---d~~~~l~~~~~v~~vPt~~i 81 (113)
T cd02975 26 VVFSSKEGCQYCEVTKQLLEELSELSDKLKLE-IYDF---DEDKEKAEKYGVERVPTTIF 81 (113)
T ss_pred EEEeCCCCCCChHHHHHHHHHHHHhcCceEEE-EEeC---CcCHHHHHHcCCCcCCEEEE
Confidence 344 45689999977655543221 13333 3333 34567777778889999876
No 182
>PF07026 DUF1317: Protein of unknown function (DUF1317); InterPro: IPR009750 This entry is represented by Bacteriophage lambda, Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=28.06 E-value=24 Score=23.40 Aligned_cols=19 Identities=26% Similarity=0.572 Sum_probs=17.2
Q ss_pred ccccccccCCccccCCCCC
Q 021466 293 VAIKVRGSFDGFLFPPGQV 311 (312)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~ 311 (312)
+-|||..--.|+++|-|+|
T Consensus 13 itl~ys~~~~GWl~Pgg~v 31 (60)
T PF07026_consen 13 ITLPYSHFKNGWLMPGGKV 31 (60)
T ss_pred EEEEEEeccceeecCCCee
Confidence 5899999999999999986
No 183
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism]
Probab=26.89 E-value=74 Score=26.30 Aligned_cols=30 Identities=17% Similarity=0.058 Sum_probs=27.4
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEE
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVEL 30 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~ 30 (312)
|-+++=+.++|+-+-..+++++++|+++--
T Consensus 1 m~ItIsG~pGsG~TTva~~lAe~~gl~~vs 30 (179)
T COG1102 1 MVITISGLPGSGKTTVARELAEHLGLKLVS 30 (179)
T ss_pred CEEEeccCCCCChhHHHHHHHHHhCCceee
Confidence 667899999999999999999999999865
No 184
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=26.87 E-value=1.5e+02 Score=25.08 Aligned_cols=56 Identities=16% Similarity=0.132 Sum_probs=35.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcC---CCEEEEecccCCCCCCChHHHHhCCCCcccEEEcCCc
Q 021466 3 LVLHAGNTNKNAFKALITAEYTG---VNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDG 62 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~g---i~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~~~g 62 (312)
+++|+.++|+.|..+..+++..- -.+.+. .++. ...++.........+|+++..++
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~-~vD~---~~~~~~~~~~~V~~vPtl~i~~~ 195 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGE-MIEA---NENPDLAEKYGVMSVPKIVINKG 195 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEE-EEeC---CCCHHHHHHhCCccCCEEEEecC
Confidence 46688889999998876665432 123333 3333 34556666777778999987654
No 185
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=26.38 E-value=2e+02 Score=21.29 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=31.4
Q ss_pred EEeecCCCccHHHHH-----HHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEE-cCCc
Q 021466 4 VLHAGNTNKNAFKAL-----ITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLE-TPDG 62 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~-----~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~-~~~g 62 (312)
..|+.++|+.|.... ++-++.|..+.+. .++. +.............+|+++ ..+|
T Consensus 29 V~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~-~vd~---d~~~~l~~~~~V~~~Pt~~i~~~g 89 (111)
T cd02963 29 IKITSDWCFSCIHIEPVWKEVIQELEPLGVGIA-TVNA---GHERRLARKLGAHSVPAIVGIING 89 (111)
T ss_pred EEEECCccHhHHHhhHHHHHHHHHHHhcCceEE-EEec---cccHHHHHHcCCccCCEEEEEECC
Confidence 455667888887554 2234443334443 4444 2345566667778899876 3444
No 186
>COG5374 Uncharacterized conserved protein [Function unknown]
Probab=26.00 E-value=27 Score=28.95 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=16.1
Q ss_pred hhhhhhhccCCCCCCcccccccccc
Q 021466 276 LDEWKRLYSNTKTNFREVAIKVRGS 300 (312)
Q Consensus 276 ld~~kr~ysn~~~~~~~~~~~~~~~ 300 (312)
+|-|||+|+-++. +.-+.+++++
T Consensus 63 iDS~~Rv~rv~~~--~nl~~a~~n~ 85 (192)
T COG5374 63 IDSWKRVYRVSKE--ANLYSASINN 85 (192)
T ss_pred HHHhHHhhhhhhh--hhhccccccc
Confidence 6888888888877 4445555554
No 187
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=25.02 E-value=2.2e+02 Score=19.10 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=32.4
Q ss_pred eEEeecCCCccHHHHHHHHHH-----cCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEc
Q 021466 3 LVLHAGNTNKNAFKALITAEY-----TGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET 59 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~-----~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~ 59 (312)
+.+|+.++|+.|....-.++. .++.+-.+ +. .....+........+|++..
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i---~~---~~~~~~~~~~~v~~~P~~~~ 69 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKV---DV---DENPELAEEYGVRSIPTFLF 69 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEE---EC---CCChhHHHhcCcccccEEEE
Confidence 355666789999888766554 55554443 33 23456666777778998654
No 188
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=24.35 E-value=1.1e+02 Score=21.42 Aligned_cols=22 Identities=14% Similarity=-0.096 Sum_probs=17.1
Q ss_pred CCccHHHHHHHHHHcCCCEEEE
Q 021466 10 TNKNAFKALITAEYTGVNVELV 31 (312)
Q Consensus 10 ~~~~~~~v~~~l~~~gi~~~~~ 31 (312)
..|++..++.+++..+++-...
T Consensus 25 ~aPftAvlkfaAEeFkv~~~Ts 46 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATS 46 (82)
T ss_pred cCchHHHHHHHHHhcCCCccce
Confidence 4578888888888888887664
No 189
>PRK07764 DNA polymerase III subunits gamma and tau; Validated
Probab=23.77 E-value=6.8e+02 Score=26.33 Aligned_cols=24 Identities=13% Similarity=0.008 Sum_probs=18.5
Q ss_pred eEEeecCCCccHHHHHHHHHHcCC
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGV 26 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi 26 (312)
+-||+.++++.+..++++++.++.
T Consensus 40 ~Lf~Gp~G~GKTt~A~~lAr~L~C 63 (824)
T PRK07764 40 YLFSGPRGCGKTSSARILARSLNC 63 (824)
T ss_pred EEEECCCCCCHHHHHHHHHHHhCc
Confidence 457777788888888888877764
No 190
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=23.02 E-value=5.1e+02 Score=22.83 Aligned_cols=67 Identities=18% Similarity=0.073 Sum_probs=39.2
Q ss_pred cHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHhhhhccccccCCHHHHHHHHHHHHHHHHHHHHhh
Q 021466 66 ESNAIARYVARLKADNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEAAIASLKRALAALNTHL 145 (312)
Q Consensus 66 eS~aI~~yL~~~~~~~~L~g~~~~e~a~v~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~Le~~L 145 (312)
|-..|-..+.++... ..-+++++..+.|.+-+.---....-.+.++ -+.+.++++++.-+..||..|
T Consensus 5 E~qLI~~lf~RL~~a-e~~prD~eAe~lI~~~~~~qP~A~Y~laQ~v------------lvQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQA-EAQPRDPEAEALIAQALARQPDAPYYLAQTV------------LVQEQALKQAQARIQELEAQL 71 (247)
T ss_pred HHHHHHHHHHHHHhc-cCCCCCHHHHHHHHHHHHhCCchHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHH
Confidence 445566666665432 2338888877777766554333222222221 234667777888888888887
No 191
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=22.40 E-value=93 Score=21.05 Aligned_cols=46 Identities=22% Similarity=0.167 Sum_probs=26.3
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhHHH
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNFRK 201 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~~~ 201 (312)
+|+.||+=...+..+....++...+.-+|++.++++++.-.|-+-+
T Consensus 1 M~i~DiiQii~l~AlI~~pLGyl~~~~~~r~~~~lr~~l~~PRylK 46 (62)
T PF11120_consen 1 MNISDIIQIIILCALIFFPLGYLARRWLPRIRRTLRRRLFPPRYLK 46 (62)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHhcCccccC
Confidence 4677875555554444444444445556777777776665554443
No 192
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism]
Probab=22.19 E-value=1.1e+02 Score=25.37 Aligned_cols=31 Identities=13% Similarity=-0.098 Sum_probs=28.2
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEE
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELV 31 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~ 31 (312)
|++.|.++.+++-+-.-+.+++.+|++|-..
T Consensus 3 ~~IvLiG~mGaGKSTIGr~LAk~L~~~F~D~ 33 (172)
T COG0703 3 MNIVLIGFMGAGKSTIGRALAKALNLPFIDT 33 (172)
T ss_pred ccEEEEcCCCCCHhHHHHHHHHHcCCCcccc
Confidence 4589999999999999999999999998775
No 193
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=21.43 E-value=1.6e+02 Score=23.55 Aligned_cols=29 Identities=14% Similarity=0.084 Sum_probs=26.7
Q ss_pred eEEeecCCCccHHHHHHHHHHcCCCEEEE
Q 021466 3 LVLHAGNTNKNAFKALITAEYTGVNVELV 31 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~ 31 (312)
++.|+.+.|++|....-.++.+|+.+..+
T Consensus 28 ~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~ 56 (149)
T COG3019 28 MVVYKSPNCGCCDEWAQHMKANGFEVKVV 56 (149)
T ss_pred EEEEeCCCCccHHHHHHHHHhCCcEEEEe
Confidence 57899999999999999999999999887
No 194
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=21.39 E-value=2.3e+02 Score=19.82 Aligned_cols=52 Identities=27% Similarity=0.308 Sum_probs=34.3
Q ss_pred eEEeecCCCccHHHHH-----HHHHHcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEE
Q 021466 3 LVLHAGNTNKNAFKAL-----ITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLE 58 (312)
Q Consensus 3 ~~Ly~~~~~~~~~~v~-----~~l~~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~ 58 (312)
++||....++.+.+.. ++-++.+-+|+.. .+|. ...++.....-.--+|+|+
T Consensus 4 L~Lyv~g~tp~S~~ai~nl~~i~e~~l~~~~~Le-VIDv---~~~P~lAe~~~ivAtPtLv 60 (72)
T cd02978 4 LRLYVAGRTPKSERALQNLKRILEELLGGPYELE-VIDV---LKQPQLAEEDKIVATPTLV 60 (72)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHhcCCcEEEE-EEEc---ccCHhHHhhCCEEEechhh
Confidence 5788876668877664 4456668888886 7777 3556665555444566664
No 195
>TIGR03493 cellullose_BcsF celllulose biosynthesis operon protein BcsF/YhjT. Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=21.31 E-value=1.3e+02 Score=20.30 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=21.4
Q ss_pred chHHHHHHHHHHHHHHhhhcCccccccChhHHHHHHHHhcChhH
Q 021466 156 VTLADIIMTCNLTLGFSRILSKSFTSEFPHIERYFWTMVNIPNF 199 (312)
Q Consensus 156 ~TlADi~l~~~l~~~~~~~~~~~~~~~~P~l~rw~~~v~~~p~~ 199 (312)
+|+.||+-...+-.+....++.-.+..+|.+..+.......|-+
T Consensus 1 M~i~DilQli~lcALIf~pLgyl~~r~~~r~r~~~r~~~~~pRY 44 (62)
T TIGR03493 1 MNISDILQLVLLCALIFFPLGYLARRSLRRIRTTLRLRLASPRY 44 (62)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHhcCCccc
Confidence 46788765555544444444432233445555554444444433
No 196
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=20.97 E-value=2.8e+02 Score=19.92 Aligned_cols=54 Identities=11% Similarity=-0.024 Sum_probs=30.8
Q ss_pred EEeecCCCccHHHHHHHH--------HHcCCCEEEEecccCCCCC-CChHHHHhCCCCcccEEEc
Q 021466 4 VLHAGNTNKNAFKALITA--------EYTGVNVELVKNFEMGVTN-KTPEFLKMNPIGKVPVLET 59 (312)
Q Consensus 4 ~Ly~~~~~~~~~~v~~~l--------~~~gi~~~~~~~v~~~~~~-~~~~~~~~~P~gkvP~L~~ 59 (312)
..|+.++|+.|....-.+ .+.+ .+... .++..... ...++........+|++..
T Consensus 16 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~-~vd~~~~~~~~~~~~~~~~i~~~Pti~~ 78 (104)
T cd02953 16 VDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLL-RADWTKNDPEITALLKRFGVFGPPTYLF 78 (104)
T ss_pred EEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEE-EEecCCCCHHHHHHHHHcCCCCCCEEEE
Confidence 456777899888765322 2332 45554 44442111 1356666777778997753
No 197
>PRK00625 shikimate kinase; Provisional
Probab=20.94 E-value=1.2e+02 Score=24.97 Aligned_cols=31 Identities=13% Similarity=-0.034 Sum_probs=27.6
Q ss_pred CCeEEeecCCCccHHHHHHHHHHcCCCEEEE
Q 021466 1 MPLVLHAGNTNKNAFKALITAEYTGVNVELV 31 (312)
Q Consensus 1 Ms~~Ly~~~~~~~~~~v~~~l~~~gi~~~~~ 31 (312)
|.+.|.++++++-+-..+.+++.+|+++-..
T Consensus 1 ~~I~LiG~pGsGKTT~~k~La~~l~~~~id~ 31 (173)
T PRK00625 1 MQIFLCGLPTVGKTSFGKALAKFLSLPFFDT 31 (173)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhCCCEEEh
Confidence 6788999999999999999999999887554
No 198
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=20.36 E-value=3.5e+02 Score=22.84 Aligned_cols=56 Identities=14% Similarity=0.213 Sum_probs=34.0
Q ss_pred eEEeec---CCCccHHHHHHHHH-----HcCCCEEEEecccCCCCCCChHHHHhCCCCcccEEEc-CCc
Q 021466 3 LVLHAG---NTNKNAFKALITAE-----YTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLET-PDG 62 (312)
Q Consensus 3 ~~Ly~~---~~~~~~~~v~~~l~-----~~gi~~~~~~~v~~~~~~~~~~~~~~~P~gkvP~L~~-~~g 62 (312)
+.+|+. ++|+.|..+.-.++ +-++.+..+ .++. +..++.....-...+|+|+. .+|
T Consensus 23 i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v-~vd~---~~~~~l~~~~~V~~~Pt~~~f~~g 87 (215)
T TIGR02187 23 IVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIY-DFDT---PEDKEEAEKYGVERVPTTIILEEG 87 (215)
T ss_pred EEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEE-ecCC---cccHHHHHHcCCCccCEEEEEeCC
Confidence 456666 67888886654442 223444444 4433 24566667777788999987 555
Done!