Query 021469
Match_columns 312
No_of_seqs 128 out of 809
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 03:11:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 1.3E-36 2.8E-41 287.9 24.1 285 3-303 121-438 (461)
2 KOG3097 Predicted membrane pro 99.9 1.1E-26 2.5E-31 207.1 9.4 230 1-240 127-389 (390)
3 TIGR00900 2A0121 H+ Antiporter 99.3 5E-10 1.1E-14 103.4 20.4 233 25-276 123-360 (365)
4 PRK03545 putative arabinose tr 99.3 3.3E-09 7.1E-14 100.2 24.5 245 24-299 127-379 (390)
5 PRK11551 putative 3-hydroxyphe 99.2 3E-09 6.5E-14 100.7 23.5 231 25-276 134-367 (406)
6 PRK10489 enterobactin exporter 99.2 4.7E-09 1E-13 100.0 24.6 227 25-276 141-371 (417)
7 PRK15402 multidrug efflux syst 99.2 8.1E-09 1.7E-13 98.0 25.2 232 25-276 132-367 (406)
8 TIGR00890 2A0111 Oxalate/Forma 99.2 2.5E-09 5.5E-14 99.0 20.0 229 26-276 122-354 (377)
9 PRK09874 drug efflux system pr 99.2 9.4E-09 2E-13 97.1 24.0 249 24-298 136-396 (408)
10 TIGR00710 efflux_Bcr_CflA drug 99.2 1.4E-08 3E-13 94.9 24.7 223 25-269 124-351 (385)
11 COG2814 AraJ Arabinose efflux 99.2 1.5E-08 3.3E-13 95.1 23.9 224 23-276 130-358 (394)
12 TIGR00893 2A0114 d-galactonate 99.2 2.7E-09 5.8E-14 99.1 18.4 261 25-296 113-395 (399)
13 TIGR00897 2A0118 polyol permea 99.2 2E-08 4.4E-13 95.3 24.7 233 25-276 136-373 (402)
14 PRK11102 bicyclomycin/multidru 99.1 2E-08 4.4E-13 93.9 23.8 230 24-273 109-343 (377)
15 PF11700 ATG22: Vacuole efflux 99.1 4.3E-08 9.2E-13 95.4 26.7 270 28-306 186-474 (477)
16 PRK03699 putative transporter; 99.1 1.6E-08 3.5E-13 95.7 22.1 243 25-295 126-375 (394)
17 PRK09556 uhpT sugar phosphate 99.1 8.1E-09 1.8E-13 100.1 20.2 262 24-300 152-449 (467)
18 PRK10213 nepI ribonucleoside t 99.1 4.1E-08 8.8E-13 93.2 24.5 224 24-276 138-363 (394)
19 TIGR00902 2A0127 phenyl propri 99.1 2.7E-08 5.9E-13 93.8 23.1 225 26-277 124-353 (382)
20 PRK11902 ampG muropeptide tran 99.1 9.8E-08 2.1E-12 90.6 26.6 229 25-275 125-361 (402)
21 PRK09528 lacY galactoside perm 99.1 9.7E-09 2.1E-13 98.0 19.7 232 27-276 138-375 (420)
22 PF07690 MFS_1: Major Facilita 99.1 1.5E-09 3.2E-14 99.9 13.6 230 24-269 115-351 (352)
23 PRK11128 putative 3-phenylprop 99.1 2.4E-08 5.3E-13 94.1 21.9 227 26-276 124-352 (382)
24 PRK11195 lysophospholipid tran 99.1 7.3E-08 1.6E-12 91.5 25.1 229 25-276 119-353 (393)
25 TIGR00901 2A0125 AmpG-related 99.1 1.3E-08 2.8E-13 94.7 19.6 230 25-263 114-355 (356)
26 PRK05122 major facilitator sup 99.1 1.1E-07 2.3E-12 89.9 25.5 143 157-307 249-396 (399)
27 PRK10077 xylE D-xylose transpo 99.1 3.6E-08 7.8E-13 95.3 22.7 245 25-274 151-421 (479)
28 TIGR00889 2A0110 nucleoside tr 99.1 4.8E-08 1E-12 93.5 23.3 227 25-276 131-368 (418)
29 PRK11043 putative transporter; 99.1 9.9E-08 2.1E-12 90.3 24.9 226 25-275 125-353 (401)
30 TIGR00899 2A0120 sugar efflux 99.1 4.6E-08 9.9E-13 91.1 22.3 218 30-276 125-346 (375)
31 PF05977 MFS_3: Transmembrane 99.0 6.1E-08 1.3E-12 95.3 23.3 228 25-276 134-366 (524)
32 PRK03633 putative MFS family t 99.0 5.1E-08 1.1E-12 91.8 21.4 219 25-276 125-344 (381)
33 PRK11663 regulatory protein Uh 99.0 7.4E-08 1.6E-12 92.5 22.8 237 25-275 142-395 (434)
34 PRK10091 MFS transport protein 99.0 1.6E-07 3.4E-12 88.6 24.5 221 24-275 121-346 (382)
35 TIGR00883 2A0106 metabolite-pr 99.0 5.3E-08 1.2E-12 90.7 21.1 238 24-275 126-371 (394)
36 TIGR00895 2A0115 benzoate tran 99.0 2.7E-08 5.9E-13 92.9 19.1 110 157-274 285-395 (398)
37 PRK11273 glpT sn-glycerol-3-ph 99.0 1.2E-07 2.6E-12 91.5 24.0 266 24-304 150-439 (452)
38 PRK12307 putative sialic acid 99.0 6.9E-08 1.5E-12 91.9 21.6 114 157-276 266-380 (426)
39 cd06174 MFS The Major Facilita 99.0 3.2E-08 6.9E-13 90.5 18.3 224 24-295 117-347 (352)
40 PRK08633 2-acyl-glycerophospho 99.0 1.5E-07 3.3E-12 100.6 25.0 238 25-275 134-380 (1146)
41 TIGR02718 sider_RhtX_FptX side 99.0 2.9E-07 6.2E-12 86.9 24.1 229 26-276 129-363 (390)
42 TIGR00891 2A0112 putative sial 99.0 7.2E-08 1.6E-12 90.5 19.6 115 156-277 273-388 (405)
43 TIGR00879 SP MFS transporter, 99.0 2.8E-08 6.2E-13 94.8 16.9 119 157-276 319-442 (481)
44 TIGR00792 gph sugar (Glycoside 99.0 4.6E-07 9.9E-12 86.5 24.9 235 25-275 131-376 (437)
45 PRK09705 cynX putative cyanate 99.0 2E-07 4.3E-12 88.4 22.1 223 26-276 128-352 (393)
46 PRK10473 multidrug efflux syst 98.9 3.6E-07 7.9E-12 86.1 23.7 224 24-276 121-350 (392)
47 PRK12382 putative transporter; 98.9 4.9E-07 1.1E-11 85.3 24.0 113 156-276 248-361 (392)
48 TIGR00898 2A0119 cation transp 98.9 2.5E-07 5.4E-12 90.3 22.6 232 25-274 211-467 (505)
49 TIGR00711 efflux_EmrB drug res 98.9 1.4E-07 3.1E-12 91.2 20.5 240 25-275 121-406 (485)
50 TIGR00892 2A0113 monocarboxyla 98.9 1.4E-07 3E-12 91.4 20.0 238 26-276 139-392 (455)
51 PRK09952 shikimate transporter 98.9 3.9E-07 8.5E-12 87.7 22.8 108 161-272 290-399 (438)
52 PRK11652 emrD multidrug resist 98.9 7.7E-07 1.7E-11 84.0 24.4 229 25-277 127-358 (394)
53 PRK11010 ampG muropeptide tran 98.9 1.2E-06 2.6E-11 85.7 26.3 252 25-299 138-402 (491)
54 PRK15403 multidrug efflux syst 98.9 9.9E-07 2.1E-11 84.3 25.1 231 24-276 134-370 (413)
55 PF13347 MFS_2: MFS/sugar tran 98.9 1.7E-07 3.7E-12 89.8 19.0 234 26-274 136-379 (428)
56 PRK06814 acylglycerophosphoeth 98.9 6.9E-07 1.5E-11 95.8 25.0 238 25-276 139-393 (1140)
57 TIGR00882 2A0105 oligosacchari 98.9 5.6E-07 1.2E-11 85.1 21.4 230 29-276 132-367 (396)
58 PRK14995 methyl viologen resis 98.8 8.2E-07 1.8E-11 86.9 22.7 238 24-274 125-408 (495)
59 TIGR01272 gluP glucose/galacto 98.8 4.1E-07 8.8E-12 83.7 19.3 228 26-271 42-282 (310)
60 TIGR00788 fbt folate/biopterin 98.8 1.3E-06 2.8E-11 85.1 23.6 241 26-276 154-410 (468)
61 PRK10406 alpha-ketoglutarate t 98.8 9.9E-07 2.1E-11 84.6 22.2 103 157-263 279-382 (432)
62 PRK10054 putative transporter; 98.8 6.6E-07 1.4E-11 85.0 20.7 225 25-276 127-356 (395)
63 PRK11646 multidrug resistance 98.8 1.6E-06 3.6E-11 82.4 23.3 224 24-276 129-356 (400)
64 PRK10642 proline/glycine betai 98.8 1E-06 2.2E-11 86.0 22.4 103 159-267 288-393 (490)
65 PRK09669 putative symporter Ya 98.8 9E-07 1.9E-11 85.2 21.1 232 26-274 142-383 (444)
66 TIGR00712 glpT glycerol-3-phos 98.8 1.4E-06 3.1E-11 83.7 22.3 259 24-297 148-430 (438)
67 TIGR00881 2A0104 phosphoglycer 98.8 2.5E-07 5.4E-12 85.7 16.5 239 25-276 114-369 (379)
68 PRK10429 melibiose:sodium symp 98.8 1.7E-06 3.6E-11 84.2 22.1 159 107-274 219-388 (473)
69 PRK15011 sugar efflux transpor 98.8 6E-06 1.3E-10 78.1 25.4 112 157-276 252-363 (393)
70 PLN00028 nitrate transmembrane 98.8 5.1E-07 1.1E-11 87.9 18.5 262 25-299 154-432 (476)
71 PRK15075 citrate-proton sympor 98.8 1.7E-06 3.8E-11 83.0 21.6 97 157-258 274-372 (434)
72 TIGR02332 HpaX 4-hydroxyphenyl 98.8 7.2E-07 1.6E-11 85.2 18.7 244 25-275 127-391 (412)
73 TIGR00896 CynX cyanate transpo 98.7 8.9E-07 1.9E-11 82.4 18.6 221 26-272 118-341 (355)
74 TIGR00886 2A0108 nitrite extru 98.7 3.5E-07 7.5E-12 85.0 15.5 236 24-265 120-365 (366)
75 PRK03893 putative sialic acid 98.7 1.3E-06 2.8E-11 85.0 20.1 115 156-276 310-425 (496)
76 PRK10504 putative transporter; 98.7 4.7E-06 1E-10 80.6 22.3 239 25-275 129-411 (471)
77 TIGR00924 yjdL_sub1_fam amino 98.7 1E-05 2.3E-10 78.8 23.8 117 159-275 314-439 (475)
78 COG2270 Permeases of the major 98.7 1.8E-06 3.9E-11 81.1 17.4 262 24-302 145-431 (438)
79 TIGR00903 2A0129 major facilit 98.7 6E-06 1.3E-10 77.8 21.3 261 2-294 90-359 (368)
80 PRK15034 nitrate/nitrite trans 98.6 9.7E-06 2.1E-10 78.5 22.2 152 25-196 158-324 (462)
81 PRK11462 putative transporter; 98.6 7.4E-06 1.6E-10 79.5 21.5 229 25-274 141-382 (460)
82 PRK10207 dipeptide/tripeptide 98.6 2.1E-05 4.6E-10 77.0 24.7 110 165-274 317-436 (489)
83 PRK10133 L-fucose transporter; 98.6 1E-05 2.2E-10 78.1 22.1 146 116-272 252-400 (438)
84 TIGR00894 2A0114euk Na(+)-depe 98.6 2.3E-06 5.1E-11 82.7 17.5 151 25-184 162-324 (465)
85 PF07690 MFS_1: Major Facilita 98.6 2.3E-06 4.9E-11 78.6 15.8 131 156-294 31-166 (352)
86 TIGR00887 2A0109 phosphate:H+ 98.6 6.8E-06 1.5E-10 80.5 20.0 108 165-276 343-451 (502)
87 TIGR01299 synapt_SV2 synaptic 98.5 1.4E-05 3.1E-10 81.6 21.8 109 160-276 598-707 (742)
88 TIGR00900 2A0121 H+ Antiporter 98.5 4E-06 8.6E-11 77.3 16.3 116 157-276 34-151 (365)
89 PF03825 Nuc_H_symport: Nucleo 98.5 7.1E-05 1.5E-09 71.4 24.0 155 113-276 198-361 (400)
90 KOG2533 Permease of the major 98.5 2.1E-06 4.4E-11 83.8 13.6 159 25-184 165-336 (495)
91 TIGR00885 fucP L-fucose:H+ sym 98.5 4E-05 8.7E-10 73.2 21.9 231 25-276 125-378 (410)
92 KOG0569 Permease of the major 98.5 3.8E-05 8.2E-10 74.5 21.3 254 5-275 137-426 (485)
93 PRK05122 major facilitator sup 98.4 7.4E-06 1.6E-10 77.3 15.4 120 156-276 50-171 (399)
94 PRK10054 putative transporter; 98.4 1.1E-05 2.3E-10 76.6 16.3 113 156-276 42-155 (395)
95 TIGR00710 efflux_Bcr_CflA drug 98.4 1.8E-05 3.9E-10 73.8 17.3 113 156-276 39-152 (385)
96 PRK09584 tppB putative tripept 98.4 1.9E-05 4.2E-10 77.4 18.2 138 160-304 60-205 (500)
97 TIGR00879 SP MFS transporter, 98.4 1.3E-05 2.8E-10 76.4 16.6 113 156-273 70-183 (481)
98 TIGR00924 yjdL_sub1_fam amino 98.4 1.2E-05 2.7E-10 78.3 16.4 136 157-300 48-192 (475)
99 PRK10207 dipeptide/tripeptide 98.4 2.1E-05 4.6E-10 77.0 17.1 135 158-299 51-193 (489)
100 PRK09705 cynX putative cyanate 98.4 1.8E-05 4E-10 74.9 16.2 113 156-276 43-155 (393)
101 PRK10091 MFS transport protein 98.4 3.8E-05 8.3E-10 72.3 18.1 111 157-275 38-149 (382)
102 PRK09848 glucuronide transport 98.3 0.0004 8.7E-09 66.9 25.3 106 163-274 270-383 (448)
103 PRK12382 putative transporter; 98.3 2.6E-05 5.6E-10 73.5 16.7 120 156-276 50-171 (392)
104 COG2271 UhpC Sugar phosphate p 98.3 6.5E-05 1.4E-09 70.8 18.7 261 26-301 149-435 (448)
105 PF03209 PUCC: PUCC protein; 98.3 0.00091 2E-08 63.1 26.0 239 20-275 115-359 (403)
106 PRK10489 enterobactin exporter 98.3 2E-05 4.2E-10 75.1 15.5 116 157-276 52-169 (417)
107 PRK03545 putative arabinose tr 98.3 5.1E-05 1.1E-09 71.6 18.2 113 156-276 43-156 (390)
108 PF03092 BT1: BT1 family; Int 98.3 0.00013 2.8E-09 70.3 20.9 242 26-276 120-377 (433)
109 TIGR01299 synapt_SV2 synaptic 98.3 6.6E-05 1.4E-09 76.8 19.6 109 157-273 202-311 (742)
110 PRK11195 lysophospholipid tran 98.3 4.8E-05 1E-09 72.2 17.4 109 157-276 38-147 (393)
111 PRK10213 nepI ribonucleoside t 98.3 6.5E-05 1.4E-09 71.3 18.2 112 157-276 55-167 (394)
112 PF05977 MFS_3: Transmembrane 98.3 3E-05 6.4E-10 76.5 16.0 176 115-295 3-185 (524)
113 PRK10473 multidrug efflux syst 98.3 6.3E-05 1.4E-09 70.9 17.7 111 157-275 38-149 (392)
114 TIGR00896 CynX cyanate transpo 98.3 5.1E-05 1.1E-09 70.5 16.8 112 156-276 34-145 (355)
115 cd06174 MFS The Major Facilita 98.3 4.5E-05 9.7E-10 69.5 16.0 113 156-276 33-146 (352)
116 TIGR00880 2_A_01_02 Multidrug 98.3 2E-05 4.3E-10 61.9 11.8 104 165-276 6-110 (141)
117 TIGR00885 fucP L-fucose:H+ sym 98.3 8.4E-05 1.8E-09 71.0 18.2 146 126-276 7-153 (410)
118 PRK15462 dipeptide/tripeptide 98.2 6.6E-05 1.4E-09 73.4 17.4 136 157-299 45-188 (493)
119 PRK15402 multidrug efflux syst 98.2 8.5E-05 1.8E-09 70.4 17.7 111 157-275 48-159 (406)
120 PRK11663 regulatory protein Uh 98.2 9.3E-05 2E-09 71.1 17.9 112 157-276 58-170 (434)
121 TIGR00890 2A0111 Oxalate/Forma 98.2 3E-05 6.6E-10 71.6 13.9 107 156-270 37-143 (377)
122 PRK03633 putative MFS family t 98.2 4E-05 8.8E-10 72.1 14.9 113 156-276 40-153 (381)
123 PRK08633 2-acyl-glycerophospho 98.2 5E-05 1.1E-09 81.4 17.4 114 158-277 48-163 (1146)
124 TIGR00882 2A0105 oligosacchari 98.2 1.5E-05 3.3E-10 75.3 12.0 119 156-276 37-156 (396)
125 PRK11102 bicyclomycin/multidru 98.2 6.2E-05 1.4E-09 70.3 16.1 112 157-276 26-138 (377)
126 TIGR01301 GPH_sucrose GPH fami 98.2 0.00048 1E-08 67.1 22.3 247 28-274 150-439 (477)
127 PRK11646 multidrug resistance 98.2 7.9E-05 1.7E-09 70.8 16.7 113 156-276 45-158 (400)
128 PRK10133 L-fucose transporter; 98.2 0.00015 3.2E-09 70.0 18.7 113 156-274 60-174 (438)
129 TIGR02332 HpaX 4-hydroxyphenyl 98.2 7.1E-05 1.5E-09 71.5 16.2 113 156-276 42-155 (412)
130 TIGR00891 2A0112 putative sial 98.2 0.00012 2.6E-09 68.5 17.4 112 157-276 47-159 (405)
131 TIGR00806 rfc RFC reduced fola 98.2 0.00011 2.4E-09 70.9 17.0 230 25-271 145-407 (511)
132 TIGR00893 2A0114 d-galactonate 98.2 3.7E-05 8.1E-10 71.2 13.3 112 157-276 29-141 (399)
133 PF01306 LacY_symp: LacY proto 98.2 0.00049 1.1E-08 65.5 20.8 157 111-276 209-372 (412)
134 PRK11551 putative 3-hydroxyphe 98.1 0.00014 3.1E-09 68.7 16.9 112 156-275 49-161 (406)
135 TIGR00895 2A0115 benzoate tran 98.1 3.9E-05 8.4E-10 71.5 12.8 112 157-276 52-164 (398)
136 COG2211 MelB Na+/melibiose sym 98.1 0.0011 2.4E-08 63.9 22.7 158 110-274 223-391 (467)
137 PRK10504 putative transporter; 98.1 0.00011 2.5E-09 70.9 16.1 112 157-276 45-157 (471)
138 TIGR01301 GPH_sucrose GPH fami 98.1 0.0002 4.4E-09 69.7 17.4 117 157-275 39-174 (477)
139 TIGR00711 efflux_EmrB drug res 98.1 9.8E-05 2.1E-09 71.4 15.1 112 157-276 37-149 (485)
140 PRK06814 acylglycerophosphoeth 98.1 0.00011 2.5E-09 78.9 16.6 112 158-276 53-167 (1140)
141 KOG3764 Vesicular amine transp 98.1 3.4E-05 7.3E-10 72.2 10.6 229 22-276 188-422 (464)
142 PRK14995 methyl viologen resis 98.1 0.00035 7.5E-09 68.4 18.4 130 157-294 41-176 (495)
143 TIGR00899 2A0120 sugar efflux 98.1 0.00036 7.9E-09 64.8 17.8 114 156-276 32-148 (375)
144 TIGR00805 oat sodium-independe 98.0 9.7E-05 2.1E-09 74.6 14.7 160 25-186 203-396 (633)
145 PRK09528 lacY galactoside perm 98.0 4E-05 8.7E-10 73.1 11.3 157 117-276 5-164 (420)
146 PRK11652 emrD multidrug resist 98.0 0.00037 8E-09 65.7 17.7 112 156-275 42-154 (394)
147 PRK15403 multidrug efflux syst 98.0 0.00043 9.2E-09 66.2 18.1 112 157-276 51-163 (413)
148 TIGR00886 2A0108 nitrite extru 98.0 0.00027 5.9E-09 65.5 15.9 112 157-276 37-149 (366)
149 COG2223 NarK Nitrate/nitrite t 98.0 0.00085 1.8E-08 63.3 18.5 219 25-265 135-361 (417)
150 PRK09584 tppB putative tripept 98.0 0.0053 1.1E-07 60.3 25.2 112 161-273 320-438 (500)
151 COG0738 FucP Fucose permease [ 98.0 0.0013 2.8E-08 61.8 19.2 243 3-276 123-381 (422)
152 PRK12307 putative sialic acid 98.0 0.0003 6.6E-09 66.9 15.6 111 157-275 53-164 (426)
153 TIGR00897 2A0118 polyol permea 98.0 0.0004 8.6E-09 65.9 16.2 114 156-274 47-163 (402)
154 PRK03699 putative transporter; 97.9 0.00049 1.1E-08 65.1 16.7 110 156-273 41-151 (394)
155 PRK15034 nitrate/nitrite trans 97.9 0.0012 2.5E-08 64.1 19.1 147 124-275 35-185 (462)
156 PRK11043 putative transporter; 97.9 0.00068 1.5E-08 64.0 17.3 113 156-276 40-153 (401)
157 PRK11273 glpT sn-glycerol-3-ph 97.9 0.00081 1.8E-08 64.9 18.1 109 155-267 61-170 (452)
158 TIGR00898 2A0119 cation transp 97.9 0.0003 6.6E-09 68.6 15.2 112 157-276 127-239 (505)
159 TIGR00792 gph sugar (Glycoside 97.9 0.00028 6E-09 67.3 14.6 114 157-272 35-155 (437)
160 KOG2504 Monocarboxylate transp 97.9 0.00047 1E-08 67.8 16.4 151 116-276 292-447 (509)
161 PRK11010 ampG muropeptide tran 97.9 0.0013 2.8E-08 64.4 19.4 155 115-275 5-165 (491)
162 KOG2532 Permease of the major 97.9 0.001 2.3E-08 64.6 18.1 263 26-299 160-446 (466)
163 PRK11462 putative transporter; 97.9 0.00076 1.6E-08 65.5 17.3 114 157-272 45-165 (460)
164 PRK09874 drug efflux system pr 97.9 0.00092 2E-08 63.0 16.9 109 159-276 56-165 (408)
165 PRK10077 xylE D-xylose transpo 97.9 0.00053 1.2E-08 66.3 15.6 116 157-273 55-176 (479)
166 TIGR00881 2A0104 phosphoglycer 97.9 7E-05 1.5E-09 69.2 9.0 106 157-270 30-136 (379)
167 PRK03893 putative sialic acid 97.8 0.00046 1E-08 67.0 14.8 112 157-276 55-167 (496)
168 PTZ00207 hypothetical protein; 97.8 0.0015 3.2E-08 65.2 18.1 108 158-268 63-170 (591)
169 PRK09556 uhpT sugar phosphate 97.8 0.00032 6.9E-09 68.0 13.1 113 156-274 63-179 (467)
170 PRK10429 melibiose:sodium symp 97.8 0.00086 1.9E-08 65.2 16.1 111 157-269 42-159 (473)
171 TIGR00887 2A0109 phosphate:H+ 97.8 0.00084 1.8E-08 65.7 16.1 116 158-275 57-173 (502)
172 TIGR00712 glpT glycerol-3-phos 97.8 0.0018 3.9E-08 62.2 17.5 114 155-272 59-173 (438)
173 KOG2563 Permease of the major 97.8 0.00087 1.9E-08 63.8 14.4 265 26-305 172-457 (480)
174 PRK11902 ampG muropeptide tran 97.8 0.0025 5.5E-08 60.4 18.0 138 131-274 8-151 (402)
175 TIGR00894 2A0114euk Na(+)-depe 97.7 0.00027 5.7E-09 68.4 11.3 114 157-276 76-190 (465)
176 KOG1330 Sugar transporter/spin 97.7 9.8E-06 2.1E-10 77.0 0.8 114 155-276 66-180 (493)
177 PF06609 TRI12: Fungal trichot 97.7 0.0035 7.6E-08 62.5 18.7 153 116-274 303-462 (599)
178 PLN00028 nitrate transmembrane 97.7 0.0015 3.3E-08 63.6 15.9 110 157-275 71-181 (476)
179 PRK11128 putative 3-phenylprop 97.7 0.0017 3.6E-08 61.1 15.7 111 156-276 38-151 (382)
180 KOG3764 Vesicular amine transp 97.7 0.00022 4.8E-09 66.8 9.0 134 157-299 106-246 (464)
181 TIGR00902 2A0127 phenyl propri 97.7 0.002 4.3E-08 60.7 15.7 114 156-276 38-151 (382)
182 PRK09848 glucuronide transport 97.6 0.0024 5.3E-08 61.4 16.1 118 157-275 44-169 (448)
183 TIGR00892 2A0113 monocarboxyla 97.6 0.0011 2.4E-08 64.2 13.5 111 157-275 54-165 (455)
184 TIGR00903 2A0129 major facilit 97.6 0.0026 5.6E-08 60.0 15.6 111 157-276 26-137 (368)
185 PF06813 Nodulin-like: Nodulin 97.6 0.0025 5.4E-08 56.8 14.1 135 138-275 17-153 (250)
186 TIGR00901 2A0125 AmpG-related 97.6 0.003 6.5E-08 58.6 15.3 113 157-275 23-141 (356)
187 PRK09669 putative symporter Ya 97.6 0.0026 5.7E-08 61.2 15.3 114 157-272 45-165 (444)
188 PF00083 Sugar_tr: Sugar (and 97.4 2.3E-07 5E-12 89.1 -14.6 109 165-275 294-407 (451)
189 PRK15011 sugar efflux transpor 97.4 0.01 2.2E-07 56.1 17.2 148 121-276 14-166 (393)
190 TIGR00883 2A0106 metabolite-pr 97.4 0.0021 4.6E-08 59.6 12.2 103 169-274 47-153 (394)
191 PRK10406 alpha-ketoglutarate t 97.4 0.0042 9.1E-08 59.5 14.3 107 164-273 70-180 (432)
192 COG2211 MelB Na+/melibiose sym 97.4 0.0083 1.8E-07 58.0 15.9 114 158-273 49-169 (467)
193 COG2271 UhpC Sugar phosphate p 97.4 0.0015 3.3E-08 61.7 10.6 148 115-273 19-173 (448)
194 PF13347 MFS_2: MFS/sugar tran 97.4 0.00078 1.7E-08 64.5 8.9 117 157-274 37-161 (428)
195 KOG4686 Predicted sugar transp 97.4 0.0034 7.4E-08 56.7 12.0 101 165-276 309-411 (459)
196 KOG3626 Organic anion transpor 97.3 0.0063 1.4E-07 61.6 14.6 112 7-128 260-398 (735)
197 TIGR00805 oat sodium-independe 97.3 0.0023 5.1E-08 64.7 11.8 120 156-276 67-231 (633)
198 PF05978 UNC-93: Ion channel r 97.3 0.00016 3.5E-09 59.7 2.9 38 21-58 116-153 (156)
199 KOG0254 Predicted transporter 97.3 0.0057 1.2E-07 60.2 14.3 112 158-277 90-202 (513)
200 KOG0254 Predicted transporter 97.3 0.024 5.3E-07 55.7 18.5 43 160-203 332-374 (513)
201 KOG0255 Synaptic vesicle trans 97.2 0.0068 1.5E-07 59.6 13.6 130 157-295 118-250 (521)
202 COG3104 PTR2 Dipeptide/tripept 97.2 0.0054 1.2E-07 59.2 11.8 140 165-310 69-216 (498)
203 PF01770 Folate_carrier: Reduc 97.1 0.24 5.2E-06 47.3 22.2 219 29-263 128-386 (412)
204 COG2807 CynX Cyanate permease 97.1 0.099 2.2E-06 48.8 18.6 142 116-269 202-346 (395)
205 KOG2816 Predicted transporter 97.0 0.17 3.6E-06 49.3 21.1 252 6-274 124-387 (463)
206 PTZ00207 hypothetical protein; 97.0 0.037 8.1E-07 55.4 17.0 131 163-305 397-557 (591)
207 TIGR00806 rfc RFC reduced fola 97.0 0.021 4.5E-07 55.5 14.5 109 159-276 64-173 (511)
208 PRK10642 proline/glycine betai 97.0 0.015 3.2E-07 56.8 13.9 105 165-272 65-173 (490)
209 TIGR00889 2A0110 nucleoside tr 97.0 0.018 3.8E-07 55.2 13.9 66 130-198 14-79 (418)
210 PF06609 TRI12: Fungal trichot 96.9 0.043 9.4E-07 54.9 16.0 134 157-302 78-219 (599)
211 COG2223 NarK Nitrate/nitrite t 96.9 0.043 9.3E-07 52.0 14.9 112 157-276 49-162 (417)
212 PF03825 Nuc_H_symport: Nucleo 96.9 0.036 7.8E-07 52.9 14.8 130 128-269 12-141 (400)
213 KOG2615 Permease of the major 96.9 0.0079 1.7E-07 56.4 9.6 111 158-278 69-181 (451)
214 PRK15075 citrate-proton sympor 96.8 0.029 6.2E-07 53.8 13.9 102 170-274 69-174 (434)
215 PRK09952 shikimate transporter 96.8 0.048 1E-06 52.4 15.1 102 168-272 75-180 (438)
216 PF03209 PUCC: PUCC protein; 96.8 0.069 1.5E-06 50.6 15.4 137 171-307 28-187 (403)
217 COG2814 AraJ Arabinose efflux 96.7 0.32 6.9E-06 46.2 19.4 137 157-304 48-189 (394)
218 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.062 1.3E-06 54.6 15.2 133 167-300 33-182 (654)
219 KOG2615 Permease of the major 96.6 0.067 1.5E-06 50.3 14.0 232 24-274 150-409 (451)
220 COG0738 FucP Fucose permease [ 96.4 0.15 3.2E-06 48.3 14.9 115 156-275 47-162 (422)
221 KOG2532 Permease of the major 96.4 0.053 1.1E-06 52.8 12.4 114 157-278 73-189 (466)
222 KOG1330 Sugar transporter/spin 96.3 0.0039 8.5E-08 59.6 4.1 170 1-184 131-310 (493)
223 PF01306 LacY_symp: LacY proto 96.3 0.026 5.7E-07 53.9 9.4 117 156-276 42-161 (412)
224 PRK15462 dipeptide/tripeptide 96.2 1.5 3.2E-05 43.1 26.3 81 191-271 348-432 (493)
225 KOG0252 Inorganic phosphate tr 96.0 0.06 1.3E-06 51.8 10.0 140 160-300 87-244 (538)
226 KOG2325 Predicted transporter/ 95.9 0.14 2.9E-06 50.0 12.6 116 156-275 70-187 (488)
227 KOG2533 Permease of the major 95.9 0.096 2.1E-06 51.4 11.6 148 120-275 39-192 (495)
228 PF05631 DUF791: Protein of un 95.9 1.5 3.3E-05 40.9 19.2 109 155-272 67-181 (354)
229 TIGR02718 sider_RhtX_FptX side 95.7 1 2.2E-05 42.2 17.6 141 127-274 6-150 (390)
230 PF02487 CLN3: CLN3 protein; 95.7 0.72 1.6E-05 44.0 16.3 58 219-276 336-394 (402)
231 KOG0569 Permease of the major 95.7 0.38 8.2E-06 47.0 14.6 108 160-272 63-171 (485)
232 PF00854 PTR2: POT family; In 95.7 0.18 4E-06 47.3 12.3 116 191-306 4-129 (372)
233 KOG0255 Synaptic vesicle trans 95.6 2.5 5.3E-05 41.5 23.4 108 161-274 354-463 (521)
234 KOG2504 Monocarboxylate transp 95.2 0.13 2.7E-06 50.8 9.6 112 157-275 81-192 (509)
235 PF11700 ATG22: Vacuole efflux 95.1 1.9 4.1E-05 42.2 17.4 112 158-275 71-210 (477)
236 KOG0637 Sucrose transporter an 95.0 0.023 4.9E-07 54.4 3.5 118 157-276 67-202 (498)
237 PF03137 OATP: Organic Anion T 94.8 0.0077 1.7E-07 59.8 0.0 113 7-129 164-312 (539)
238 TIGR00788 fbt folate/biopterin 94.8 1.7 3.8E-05 42.2 16.4 114 157-276 61-181 (468)
239 KOG3810 Micronutrient transpor 94.3 4.6 0.0001 37.9 18.8 146 158-310 272-431 (433)
240 TIGR00769 AAA ADP/ATP carrier 94.2 5.9 0.00013 38.7 19.4 156 26-185 161-331 (472)
241 TIGR00939 2a57 Equilibrative N 94.1 6 0.00013 38.3 18.5 110 160-273 310-428 (437)
242 KOG2563 Permease of the major 94.0 2.3 4.9E-05 41.1 14.5 117 159-276 81-199 (480)
243 KOG2325 Predicted transporter/ 94.0 0.35 7.6E-06 47.2 9.3 38 7-54 152-189 (488)
244 PF12832 MFS_1_like: MFS_1 lik 94.0 0.2 4.3E-06 36.1 5.8 36 156-191 34-69 (77)
245 KOG2816 Predicted transporter 93.7 1.6 3.4E-05 42.6 13.3 146 120-276 16-171 (463)
246 KOG3762 Predicted transporter 93.4 9.2 0.0002 38.0 17.5 184 110-305 359-552 (618)
247 PF05978 UNC-93: Ion channel r 93.2 1.4 3E-05 36.4 10.3 87 170-265 50-137 (156)
248 COG2807 CynX Cyanate permease 93.2 4 8.6E-05 38.5 14.2 135 159-302 49-188 (395)
249 KOG0252 Inorganic phosphate tr 93.1 0.039 8.4E-07 53.1 1.1 33 23-55 173-205 (538)
250 PF00083 Sugar_tr: Sugar (and 93.1 0.0038 8.2E-08 59.8 -5.9 113 159-276 48-161 (451)
251 PF03219 TLC: TLC ATP/ADP tran 92.0 1.6 3.5E-05 42.8 10.8 155 26-185 176-347 (491)
252 PF06963 FPN1: Ferroportin1 (F 91.5 14 0.0003 35.7 17.7 251 24-287 143-426 (432)
253 COG0477 ProP Permeases of the 91.0 7.4 0.00016 33.4 13.2 111 158-274 40-153 (338)
254 COG3202 ATP/ADP translocase [E 90.9 17 0.00037 35.6 19.1 144 122-270 27-201 (509)
255 COG2270 Permeases of the major 90.4 3.4 7.3E-05 39.6 10.7 113 156-272 57-170 (438)
256 KOG1479 Nucleoside transporter 90.0 7.3 0.00016 37.2 12.7 113 158-273 283-399 (406)
257 TIGR01272 gluP glucose/galacto 90.0 3.2 7E-05 37.9 10.3 57 219-275 11-68 (310)
258 PF03219 TLC: TLC ATP/ADP tran 89.5 23 0.00049 34.9 20.1 70 121-192 23-93 (491)
259 KOG4332 Predicted sugar transp 89.2 17 0.00038 33.1 17.9 199 104-309 229-444 (454)
260 KOG0253 Synaptic vesicle trans 88.9 8.1 0.00017 36.8 11.7 131 159-299 115-250 (528)
261 TIGR00769 AAA ADP/ATP carrier 88.7 25 0.00055 34.4 20.2 66 123-188 8-75 (472)
262 COG3202 ATP/ADP translocase [E 88.6 26 0.00056 34.4 18.8 33 26-58 180-212 (509)
263 TIGR00939 2a57 Equilibrative N 88.3 12 0.00026 36.2 13.3 31 219-250 107-137 (437)
264 COG3104 PTR2 Dipeptide/tripept 87.5 30 0.00066 33.9 19.6 104 171-274 342-451 (498)
265 PF07672 MFS_Mycoplasma: Mycop 87.4 14 0.0003 33.2 11.9 28 161-188 145-173 (267)
266 PF03092 BT1: BT1 family; Int 87.0 7.5 0.00016 37.5 11.0 100 174-276 41-147 (433)
267 PF13000 Acatn: Acetyl-coenzym 82.4 54 0.0012 32.4 18.6 75 105-182 261-338 (544)
268 KOG3762 Predicted transporter 79.0 2 4.4E-05 42.4 3.4 58 143-203 35-92 (618)
269 TIGR00880 2_A_01_02 Multidrug 76.9 8.6 0.00019 29.1 6.1 56 25-86 82-137 (141)
270 KOG3098 Uncharacterized conser 76.1 14 0.0003 36.0 8.3 99 165-272 58-161 (461)
271 PF02990 EMP70: Endomembrane p 75.3 90 0.002 31.0 14.0 116 67-186 206-326 (521)
272 PF01733 Nucleoside_tran: Nucl 71.5 1.5 3.2E-05 40.2 0.4 108 163-273 188-304 (309)
273 KOG0253 Synaptic vesicle trans 67.9 21 0.00047 34.1 7.1 32 165-197 389-420 (528)
274 TIGR00926 2A1704 Peptide:H+ sy 58.1 2.3E+02 0.0049 29.1 14.7 61 26-86 120-181 (654)
275 COG5336 Uncharacterized protei 53.0 34 0.00073 26.3 4.7 16 169-184 54-69 (116)
276 PRK03612 spermidine synthase; 51.4 2.6E+02 0.0056 27.8 14.2 25 251-275 143-167 (521)
277 TIGR01478 STEVOR variant surfa 50.7 27 0.00059 31.5 4.5 41 265-305 248-288 (295)
278 PTZ00370 STEVOR; Provisional 48.5 30 0.00066 31.3 4.4 42 264-305 243-284 (296)
279 PF11085 YqhR: Conserved membr 46.4 56 0.0012 27.2 5.4 70 164-233 75-149 (173)
280 KOG1479 Nucleoside transporter 44.3 3E+02 0.0065 26.5 12.4 74 220-297 119-201 (406)
281 KOG3574 Acetyl-CoA transporter 41.8 2.4E+02 0.0051 27.3 9.3 172 92-272 2-188 (510)
282 PF01770 Folate_carrier: Reduc 40.3 3.5E+02 0.0075 26.1 12.5 91 176-275 60-151 (412)
283 KOG1237 H+/oligopeptide sympor 37.9 2E+02 0.0044 28.9 9.0 137 166-302 82-247 (571)
284 KOG4332 Predicted sugar transp 37.4 3.4E+02 0.0073 25.1 10.4 110 165-275 175-308 (454)
285 PF10292 7TM_GPCR_Srab: Serpen 35.9 2.1E+02 0.0045 26.3 8.2 18 26-43 132-149 (324)
286 PF05631 DUF791: Protein of un 32.9 4.2E+02 0.0092 24.9 16.7 74 108-183 229-304 (354)
287 PF06813 Nodulin-like: Nodulin 31.6 1.3E+02 0.0029 26.6 6.0 58 25-90 126-185 (250)
288 KOG3880 Predicted small molecu 29.1 4.9E+02 0.011 24.5 11.9 56 219-274 343-399 (409)
289 KOG3626 Organic anion transpor 28.4 1.7E+02 0.0037 30.4 6.7 56 220-275 239-295 (735)
290 PF00854 PTR2: POT family; In 27.2 2E+02 0.0044 26.6 6.8 57 24-86 66-122 (372)
291 KOG1277 Endosomal membrane pro 25.6 72 0.0016 31.0 3.2 29 162-190 332-360 (593)
292 COG5336 Uncharacterized protei 24.5 2.8E+02 0.006 21.4 5.5 22 220-241 75-96 (116)
293 PF15102 TMEM154: TMEM154 prot 23.8 52 0.0011 26.7 1.7 24 284-307 66-89 (146)
294 PF01925 TauE: Sulfite exporte 23.7 4.6E+02 0.01 22.3 11.8 23 255-277 170-192 (240)
295 PF06166 DUF979: Protein of un 21.6 6.4E+02 0.014 23.2 8.8 25 26-50 25-49 (308)
296 PF04276 DUF443: Protein of un 21.6 2.7E+02 0.0059 23.7 5.8 75 10-90 39-114 (199)
297 PF01102 Glycophorin_A: Glycop 20.9 1.2E+02 0.0027 23.8 3.2 10 300-309 88-97 (122)
298 PF05961 Chordopox_A13L: Chord 20.8 1.7E+02 0.0037 20.4 3.5 23 284-306 6-28 (68)
299 PF03137 OATP: Organic Anion T 20.5 28 0.0006 34.7 -0.6 119 156-275 37-199 (539)
300 PF07760 DUF1616: Protein of u 20.2 5.4E+02 0.012 23.2 7.8 32 240-272 40-71 (287)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.3e-36 Score=287.91 Aligned_cols=285 Identities=25% Similarity=0.347 Sum_probs=231.2
Q ss_pred cccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-C-C-CC-------------ch
Q 021469 3 WRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-S-T-SG-------------TT 66 (312)
Q Consensus 3 ~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-~-~-~~-------------~~ 66 (312)
+|||.|+|+++++ ++++||.+++|+++++|.++|+++.+++++..+.. . + .. ..
T Consensus 121 ~GqG~ylt~~st~----------~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (461)
T KOG3098|consen 121 TGQGGYLTSNSTR----------ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIK 190 (461)
T ss_pred cccceehhhcCCh----------hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHH
Confidence 6899999999987 79999999999999999999999998887654411 0 1 11 23
Q ss_pred hhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccc
Q 021469 67 LLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 146 (312)
Q Consensus 67 ~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~ 146 (312)
.++.++..+..++++...++|.++.+.+++.+ + .++++++|++.|+++||||++++|+++|+|++.+||.++||
T Consensus 191 ~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~~-----~-~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iyp 264 (461)
T KOG3098|consen 191 VLFGVLLAISVLSIINFDFLPSKDVVNCKSSS-----E-TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYP 264 (461)
T ss_pred HHHHHHHHHHHHHhhheeecCccchhhhhhhc-----c-ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccc
Confidence 45666677777777777777766655544311 1 57899999999999999999999999999999999999999
Q ss_pred cccc-ccccccc---hhhHHHHHHhHHHHHHHHHHhhhhcCCCC--hhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---
Q 021469 147 KEIV-TPALGVS---GVGGAMAVYGAFDAICSLAAGRLTTGLPS--ITFIVSGGAIAQVVVFLWILINYSVTSGVLG--- 217 (312)
Q Consensus 147 ~~~~-s~~lg~~---~~g~v~~~~g~~~~ig~~~~G~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 217 (312)
+++. +...+.+ ..++-+++-|++|++++...+.+.||.++ |.+++.++.++|...+++..+.+|.|.|..+
T Consensus 265 t~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~ 344 (461)
T KOG3098|consen 265 TCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDS 344 (461)
T ss_pred hhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcc
Confidence 8875 2233433 35677788899999999999999886532 4568889999999888887778887765322
Q ss_pred --------chHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 021469 218 --------TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGI 289 (312)
Q Consensus 218 --------~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~~~ 289 (312)
..+++++++++|++|+++|+++|++++..+||++.++|+++|+.|++++|++++.++..+.+.+...+.+.+
T Consensus 345 ~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~~l~~~~l~~~i~~ 424 (461)
T KOG3098|consen 345 PPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYLLLYIYTLGLPIFC 424 (461)
T ss_pred cccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 136899999999999999999999999999999999999999999999999999999988888888888777
Q ss_pred HHHHHHHHHhhhhh
Q 021469 290 CVALVGILFLTIQV 303 (312)
Q Consensus 290 ~~~~~~~~~~~~~~ 303 (312)
.++...++.+.++.
T Consensus 425 ~i~~~~~~~~~~~~ 438 (461)
T KOG3098|consen 425 VIATTIFFIVAERT 438 (461)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777666554
No 2
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.94 E-value=1.1e-26 Score=207.12 Aligned_cols=230 Identities=30% Similarity=0.397 Sum_probs=179.4
Q ss_pred CccccceeecccchhhhhhcC-CCcCceeechhhHHHHHHHHhHhhhhHHhhHhh----cC----CC-CcC---------
Q 021469 1 MGWRGGTYLTAAALSHASNHK-LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL----KD----DK-GGS--------- 61 (312)
Q Consensus 1 ~~~aqG~Ylt~~s~~~~~~~~-~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~----~~----~~-~~~--------- 61 (312)
++.++|+|+|+++++|++.++ +..+..+.+++|.||.++++.+++||+++..+. ++ .+ +.+
T Consensus 127 ~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~ 206 (390)
T KOG3097|consen 127 IWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCG 206 (390)
T ss_pred ccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCC
Confidence 356799999999999999996 556668999999999999999999999986543 11 01 000
Q ss_pred ---C----------CCchhhHHHHHHHHHHHHHHHHhccC-CccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHH
Q 021469 62 ---T----------SGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 127 (312)
Q Consensus 62 ---~----------~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll 127 (312)
. .+.-.+-.+|+.+++++.+++.+... ..+..++- -...+..+.+.-++|.++|+|++++
T Consensus 207 ~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~~~~~~~~l~r~~~~r------~~~~~~l~i~~l~~~~l~~~r~~ll 280 (390)
T KOG3097|consen 207 SGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLIMLFFLGALKRYGEKR------LASVSGLNIFQLTFKHLRDIRLRLL 280 (390)
T ss_pred ccccccCCccCCCCCceEEeeHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhcccccchHHHHHHHhcCcceeee
Confidence 0 01123456677777777766544332 22221110 1234567888999999999999999
Q ss_pred HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh
Q 021469 128 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 207 (312)
Q Consensus 128 ~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (312)
.|++.|+|++++|..++++|+++.|++|++.+|++|++||+...+.+.+.|-|.++++ |.++...+.+.|.......+
T Consensus 281 vP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~g-r~~~~v~gavv~l~li~~~~- 358 (390)
T KOG3097|consen 281 VPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFAMACFGVGDAVASSLFGLLGKWIG-RPPLLVLGAVVHLLLITILF- 358 (390)
T ss_pred ehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999998 45677788888876544333
Q ss_pred cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469 208 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 240 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~ 240 (312)
.|+|.+ .|++.+++.+.+||.+|+.||++++
T Consensus 359 ~w~~~~--~~~~i~y~~aalwgv~d~vw~t~in 389 (390)
T KOG3097|consen 359 FWAPNP--QDSWIFYVAAALWGVGDAVWKTQIN 389 (390)
T ss_pred hcccCC--CCceEEEeehhhcCccHHHHHhhcC
Confidence 687765 2456789999999999999999975
No 3
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=5e-10 Score=103.42 Aligned_cols=233 Identities=15% Similarity=0.108 Sum_probs=140.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+++|++..|+.....+.+.++|.++...+....+ .+..|.+..+..+++.++..+++.|+++++++++ .+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 192 (365)
T TIGR00900 123 EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG------IKWAIWVDAVGFAISALLIVSVRIPELAASEIQA-LS--- 192 (365)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHhcccccCCCccccc-cc---
Confidence 4689999999999999999999988876653221 2334444444444444444445444433211111 00
Q ss_pred hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhh-Hhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGL-QQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~-~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+..+++.++.++ +++||+.+.+....+.... ..+......| .+..+.. +..+.|.+....+++..+++++.|++
T Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (365)
T TIGR00900 193 -NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFP-YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLL 270 (365)
T ss_pred -hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122233333 5678887655544333322 2222212111 1112212 23467888889999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLK 259 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~ 259 (312)
.||++||+ ++..+..+...+.... .+.++ + .+..++..+++|++.+..+.....++.+..|++ +.++.++.+
T Consensus 271 ~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (365)
T TIGR00900 271 GRYFKRMA-LMTGAIFVIGLAILVV--GLTPP-N---FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQF 343 (365)
T ss_pred HHHhchhH-HHHHHHHHHHHHHHHH--Hhhch-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99987664 4344433333222222 12221 1 245677889999999999998888999988754 467899999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
..+++|..++-.+.+.+
T Consensus 344 ~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 344 SLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888776643
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=99.25 E-value=3.3e-09 Score=100.18 Aligned_cols=245 Identities=15% Similarity=0.062 Sum_probs=144.2
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++|++..|+.......+.++|..+...+.... ..+..|.+..++.++..++. .++|++++ +++
T Consensus 127 ~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~------ 192 (390)
T PRK03545 127 PAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL------GWRTTFLAIGGGALITLLLLIKLLPLLPS--EHS------ 192 (390)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh------cHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCc------
Confidence 3468999999999999999999988876654321 13556666666665554443 33443221 111
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
. ..++..+.++||+...+.- .++......... +..+. +..+..| ....+..+..+++++++++++.|+
T Consensus 193 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 263 (390)
T PRK03545 193 ---G----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAY-SYIEP-FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSR 263 (390)
T ss_pred ---c----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122345678887643322 122111111111 11111 1111122 345788888899999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK 259 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~ 259 (312)
+.||+++|. +. .+..+......... ..+++ ++...+..+++|++...........+.+..|+++.++++.+.
T Consensus 264 l~dr~~~~~-~~-~~~~~~~~~~~~l~-~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 335 (390)
T PRK03545 264 LGNRHPSGF-LL-IAIALLLVCLLLLL-PAANS-----EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFS 335 (390)
T ss_pred HhhccchhH-HH-HHHHHHHHHHHHHH-HHhch-----HHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHH
Confidence 999987653 32 33322222222111 12222 234556788899988776666667777778887778899999
Q ss_pred HHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469 260 VWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~ 299 (312)
....+|.+++-.+.+.+ ....-.++..++.+++++.....
T Consensus 336 ~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 336 GIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887754 33444455555556655554333
No 5
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.24 E-value=3e-09 Score=100.69 Aligned_cols=231 Identities=13% Similarity=-0.011 Sum_probs=128.6
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~ 103 (312)
+++|++..|+++.....+..+|.++...+.... ..+..|.+..++.++..++. .++|++++..+++++ + +
T Consensus 134 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~-~ 204 (406)
T PRK11551 134 PRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA------AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA--G-K 204 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc------CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc--c-h
Confidence 468999999999998888888887765443221 12445555555545444433 445654332211100 0 0
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHH-HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLI-IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 182 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll-~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d 182 (312)
++++.++. .++..++++...+ ...+........+ ....|.-+.....+....+.....+++++++++++.|++.|
T Consensus 205 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 280 (406)
T PRK11551 205 QRAPVLRA---LFGEGRATATLLLWISYFFTLIVLYFL-LNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMD 280 (406)
T ss_pred hhhhhHHH---HhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 1111112222211 1111111111111 11111111111122346788888899999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHH
Q 021469 183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVW 261 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~ 261 (312)
|+++|+ .+.+..+....++... ...++ .+...+..++.|++....++..+.+..+.+|++. ..+.++....
T Consensus 281 r~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 281 RLRPRR-VVLLIYAGILASLAAL--AAAPS-----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHhHHH-HHHHHHHHHHHHHHHH--HhcCc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 998665 3333333333232221 12222 2335567788898888888888889999987654 6789999999
Q ss_pred HHHHHHHHHHhhhhh
Q 021469 262 QCASIAVVFFIGPYI 276 (312)
Q Consensus 262 qs~g~ai~f~~~~~l 276 (312)
..+|.+++-.+.+.+
T Consensus 353 ~~~g~~~g~~~~g~l 367 (406)
T PRK11551 353 GRLGSMAGPLLAGQL 367 (406)
T ss_pred hhHHHHHHhhhHhhh
Confidence 999998888777654
No 6
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.23 E-value=4.7e-09 Score=99.97 Aligned_cols=227 Identities=8% Similarity=-0.063 Sum_probs=136.1
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++++++..++.....+.+.++|..+...+..... .+..|.+..++.++..++...+|+++++++++ +++
T Consensus 141 ~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~ 209 (417)
T PRK10489 141 RENLMQAGAITMLTVRLGSVISPALGGLLIAAGG------VAWNYGLAAAGTFITLLPLLRLPALPPPPQPR-----EHP 209 (417)
T ss_pred HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHhCCCCCCCCccc-----ccc
Confidence 4678999999999999999999988866543211 12344444444445554455555432211111 011
Q ss_pred hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
. ++.++.++ .+++|....++...+......++ ...++ .+..+..| ....|+++..++++.++++++.+++.
T Consensus 210 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~ 283 (417)
T PRK10489 210 L----RSLLAGFRFLLASPVVGGIALLGGLLTMASAV-RVLYP-ALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLA 283 (417)
T ss_pred h----HHHHHHHHHHHcChHHHHHHHHHHHHHHHHhH-HHhhH-HHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 22222233 46677764443332222111111 11111 12222223 35678888899999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKV 260 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~ 260 (312)
||.++++ .+..+.++....+++. ...++ .+...+..+++|++.+..+...++++.+..|++ +.+++++++.
T Consensus 284 ~~~~~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 355 (417)
T PRK10489 284 HSARPGL-LMLLSTLGSFLAVGLF--GLMPM-----WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTA 355 (417)
T ss_pred hccCcch-HHHHHHHHHHHHHHHH--Hccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9755443 3344444443333322 22222 234567788899999888888888888888865 4789999999
Q ss_pred HHHHHHHHHHHhhhhh
Q 021469 261 WQCASIAVVFFIGPYI 276 (312)
Q Consensus 261 ~qs~g~ai~f~~~~~l 276 (312)
.+.+|.+++-.+.+.+
T Consensus 356 ~~~~g~~~g~~l~G~l 371 (417)
T PRK10489 356 QNVTGDAIGAALLGGL 371 (417)
T ss_pred HHhhhHhHHHHHHHHH
Confidence 9999999999888765
No 7
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.22 E-value=8.1e-09 Score=97.96 Aligned_cols=232 Identities=13% Similarity=0.050 Sum_probs=131.1
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~~~~~~ 103 (312)
++.+++..++.......+..+|..+...+....+ .+..|.+..++.++..+... .+|+++++++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 198 (406)
T PRK15402 132 EADAIKITALMANVALLAPLLGPLVGAALIHVLP------WRGMFVLFAALAALSFFGLWRAMPETAGRVGEK------- 198 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC------ccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-------
Confidence 3567788888888888888999888766543221 24456666666665554433 333322211111
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
.+.++..++..++++||+.+.+...+...+.....+....+. +..+..|. ...|.......++.++++.+.|++.
T Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 275 (406)
T PRK15402 199 --LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPV-ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT 275 (406)
T ss_pred --ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122223345678888766554433333222122111111 11111222 3456776777778899999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKV 260 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~ 260 (312)
||+++|+ .+.++.++......+... ...+.. .+++.++..+++|++.+...+..+...-...++++.++.+++.+
T Consensus 276 ~r~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 351 (406)
T PRK15402 276 SRRPLRS-LIRMGLWPMVAGLLLAALATVISSH---AYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGM 351 (406)
T ss_pred HhcCHHH-HHHHHHHHHHHHHHHHHHHHHcccc---cHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHH
Confidence 9998665 444555554433332221 111111 12345566778888888766665554433344556689999999
Q ss_pred HHHHHHHHHHHhhhhh
Q 021469 261 WQCASIAVVFFIGPYI 276 (312)
Q Consensus 261 ~qs~g~ai~f~~~~~l 276 (312)
.+.+|.+++-.+...+
T Consensus 352 ~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 352 LSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999998888877754
No 8
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.19 E-value=2.5e-09 Score=98.98 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=131.5
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++|++..+++......+.++++.+...+.... ..+..|.+..++.++..+.. .++++|++++++++++.+ ++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 194 (377)
T TIGR00890 122 DKRGLASGIIIGGYGLGSFILSPLITSVINLE------GVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS-VK 194 (377)
T ss_pred cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc------cHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc-hh
Confidence 56899999998888888877665443333211 13455666665555555444 445544433221111100 01
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTT 182 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d 182 (312)
-++..+.++||+..++...++...+......+..+. +. ..+| .+..+.....++++.+++..+.|++.|
T Consensus 195 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 265 (377)
T TIGR00890 195 -------DYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKP-YG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSD 265 (377)
T ss_pred -------hhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHH-HH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112345677887765554433332222222121111 11 1122 345677888899999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHH
Q 021469 183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVW 261 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~ 261 (312)
|++||+ .+.++.++...+..+.. +.++. +....+...++.|++.+..++..+.+..+.+|++ +.++++++...
T Consensus 266 r~g~~~-~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 339 (377)
T TIGR00890 266 KIGRQK-TMSIVFGISAVGMAAML--FIPML---NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTA 339 (377)
T ss_pred HHhhhh-hhhHHHHHHHHHHHHHH--Hcccc---hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHH
Confidence 998765 44455444444433322 11211 1122334456677777776777777888888754 46789999999
Q ss_pred HHHHHHHHHHhhhhh
Q 021469 262 QCASIAVVFFIGPYI 276 (312)
Q Consensus 262 qs~g~ai~f~~~~~l 276 (312)
..+|.+++-.+.+.+
T Consensus 340 ~~~g~~~~~~~~g~l 354 (377)
T TIGR00890 340 KAVAGIFGGLIASHA 354 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888776654
No 9
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.19 E-value=9.4e-09 Score=97.07 Aligned_cols=249 Identities=16% Similarity=0.127 Sum_probs=142.0
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++|++..|+.....+.+.++|..+...+....+ .+..|.+..++.+++.++. ++++++.++.+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 203 (408)
T PRK09874 136 PRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG------LRPVFFITASVLFLCFLVTLFCIRENFQPVSKK------ 203 (408)
T ss_pred CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHhccCcccccch------
Confidence 34678999999998889999888888766543211 2445666666666555544 3444432221111
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHH-HHHHHHhhhhHhhhhhhc---cccccccccccc--chhhHHHHHHhHHHHHHHHH
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLL-IIPLFAYSGLQQAFVWAE---FTKEIVTPALGV--SGVGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~ 176 (312)
++ .+.++..+.+++++.++ +.-..+......+..... |.+..... .+. ...|.+..+.+++.+++...
T Consensus 204 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~l~~~~~~~~ 277 (408)
T PRK09874 204 -EM----LHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGN-VSNIAFISGMIASVPGVAALLSAPR 277 (408)
T ss_pred -hh----hHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 11234456678888643 222222222222111111 11111000 000 12355556678888899999
Q ss_pred HhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469 177 AGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAF 255 (312)
Q Consensus 177 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~af 255 (312)
.|++.||++||+ .+..+..+.....+.. .+.++ ++..++..+++|++++.........+....+++ ..+++
T Consensus 278 ~g~l~dr~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 349 (408)
T PRK09874 278 LGKLGDRIGPEK-ILITALIFSVLLLIPM--SFVQT-----PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIF 349 (408)
T ss_pred HHHHHhccccch-hHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeee
Confidence 999999998765 4344444433332221 12222 244567778899999998888887777666644 36789
Q ss_pred HHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHH
Q 021469 256 AQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILF 298 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~ 298 (312)
+++...+.+|.+++-.+...+ ....-+.+..++.+++.+....
T Consensus 350 ~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 350 SYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988887754 2333344444555555554433
No 10
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.18 E-value=1.4e-08 Score=94.85 Aligned_cols=223 Identities=16% Similarity=0.050 Sum_probs=126.1
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~~~~~~~~~ 103 (312)
+++|++..|+.....+.+..+|..+...+....+ .+..|.+..++..+..++..+ +|+++++++++
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 190 (385)
T TIGR00710 124 GEELSRIYSILMPVLALAPAVAPLLGGYILVWLS------WHAIFAFLSLAGILLSALIFFILPETLPYEARI------- 190 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-------
Confidence 4679999999999999999999988876554221 244555555555555544433 33332221111
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+. ++..++..+.+++|+.+.+.-.. +..+...++. ...+. +..+.. +.+..|++....+++.++++.+.|++
T Consensus 191 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 265 (385)
T TIGR00710 191 QI---STYFETFLLLLKSKMFWGYALIYGASFGGFFAFF-SGAPF-VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRF 265 (385)
T ss_pred CH---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH-HcChH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 11223334567788875544322 1111111111 11111 111112 23467888888999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK 259 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~ 259 (312)
.||+++|+.+ ..+.++......+... ..++.. .........++.|++.+...........+..|++..++.++++
T Consensus 266 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 341 (385)
T TIGR00710 266 IKKWGAKSLL-RMGLILFAVSAVLLEITAILGLG---SWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFG 341 (385)
T ss_pred HHhcCHHHHH-HHHHHHHHHHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHH
Confidence 9999876533 3444333333222211 111111 0123455677788888888777777777777776677888888
Q ss_pred HHHHHHHHHH
Q 021469 260 VWQCASIAVV 269 (312)
Q Consensus 260 ~~qs~g~ai~ 269 (312)
..+..+.++.
T Consensus 342 ~~~~~~g~i~ 351 (385)
T TIGR00710 342 TLRLVLGAIV 351 (385)
T ss_pred HHHHHHHHHH
Confidence 7765544433
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=1.5e-08 Score=95.14 Aligned_cols=224 Identities=16% Similarity=0.125 Sum_probs=146.2
Q ss_pred CcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcc
Q 021469 23 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADAS 101 (312)
Q Consensus 23 ~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~ 101 (312)
-.+++|+|..|+...-..++.++|--+..++=..- ..+..|.+..+++.+..+.. ..+|+++.+++.+
T Consensus 130 vpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~----- 198 (394)
T COG2814 130 VPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------GWRATFLAIAVLALLALLLLWKLLPPSEISGSLP----- 198 (394)
T ss_pred cCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC-----
Confidence 35689999999999999999999887776652211 13566766666666665554 4455122222111
Q ss_pred hhhhhHHHHHHHHHHHhhcChhhHH--HHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHH
Q 021469 102 VNFYSYLVSLSKSITTLLADVRMLL--IIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAA 177 (312)
Q Consensus 102 ~~~~~s~~~~~~~~~~~~~~~~~ll--l~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~ 177 (312)
.++++.++++++|+.+. ++-.+.+.|.+..|-+ -+-+..+.-| .+.+++++..||++.++|+++.
T Consensus 199 --------~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftY---i~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~g 267 (394)
T COG2814 199 --------GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTY---IRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLG 267 (394)
T ss_pred --------cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHh---HHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 22345578889999743 4444555665544432 1111122223 3568999999999999999999
Q ss_pred hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHH
Q 021469 178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQ 257 (312)
Q Consensus 178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~ 257 (312)
|++.|| +.|+ .+.....+....... +..++.+ ++...+..++||+....-......-++...||+.+.+.++
T Consensus 268 Grl~dr-~~~~-~l~~~~~l~a~~~l~-l~~~~~~-----~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl 339 (394)
T COG2814 268 GRLADR-GPRR-ALIAALLLLALALLA-LTFTGAS-----PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSL 339 (394)
T ss_pred hhhccc-cchh-HHHHHHHHHHHHHHH-HHHhcch-----HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHH
Confidence 999999 5444 333443444444332 2233322 2456777777999887776666666666678888889999
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 021469 258 LKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 258 ~~~~qs~g~ai~f~~~~~l 276 (312)
+....++|.+++-.+...+
T Consensus 340 ~~aa~nlgia~GA~lGG~v 358 (394)
T COG2814 340 NVAAFNLGIALGAALGGLV 358 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888864
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.16 E-value=2.7e-09 Score=99.09 Aligned_cols=261 Identities=12% Similarity=-0.005 Sum_probs=136.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCcccccc-c--hhhc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEK-E--TADA 100 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~-~--~~~~ 100 (312)
+++|++..|+.....+.+.++|..+...+....+ .+..|.+..++.++..++..+ +++++++++. + +++.
T Consensus 113 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (399)
T TIGR00893 113 ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS------WQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI 186 (399)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC------chHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhh
Confidence 4689999999999999999999988876654321 244565555555554444433 4433221110 0 0000
Q ss_pred chh-------hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHH
Q 021469 101 SVN-------FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDA 171 (312)
Q Consensus 101 ~~~-------~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ 171 (312)
..+ ++....+.-++..+.+++|+.+.+....+.............+ .+..+..| ....+......+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (399)
T TIGR00893 187 VVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFP-TYLVQERGLSILEAGFMASLPGIVGF 265 (399)
T ss_pred cchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHhcccHHHhhHHHHHHHHHHH
Confidence 000 0000001112344567888876555444333332222222111 11112223 2456788888999999
Q ss_pred HHHHHHhhhhcCCCChhhHHHHHHHHHHHH---HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469 172 ICSLAAGRLTTGLPSITFIVSGGAIAQVVV---FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 248 (312)
Q Consensus 172 ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~ 248 (312)
++..+.|++.||++||+............. ...........+ ..+..+.....+......+...+.++.+.+|
T Consensus 266 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (399)
T TIGR00893 266 IGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN----IPYAALALVALGFFGLGAGAIGWALISDNAP 341 (399)
T ss_pred HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHhchhhhhHHHHHHHhhcC
Confidence 999999999999876631111111111111 111111111110 1122333333333333367888888989887
Q ss_pred CC-hhhhHHHHHHHHHHHHHHHHHhhhhh----h-HHHHHHHHHHHHHHHHHHH
Q 021469 249 HD-TEGAFAQLKVWQCASIAVVFFIGPYI----S-LQAMLIVMVVGICVALVGI 296 (312)
Q Consensus 249 ~~-~~~afa~~~~~qs~g~ai~f~~~~~l----~-~~~~~~il~~~~~~~~~~~ 296 (312)
++ +..++++....+.+|..++-.+.+.+ . ....+.+..+..+++.+.+
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 342 GNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 54 46799999999999999988777654 2 2333333334444444443
No 13
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.16 E-value=2e-08 Score=95.31 Aligned_cols=233 Identities=16% Similarity=0.109 Sum_probs=122.7
Q ss_pred CceeechhhHHHHHHHHhH-hhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccCCccccccchhhcch
Q 021469 25 GTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASV 102 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~-iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~~~~~~~~~~~~~~~ 102 (312)
+++|++..|+.....+.+. ++|..+...+....+ .....+ ....+..++.++.++ ++++.++++++ + .
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~ 205 (402)
T TIGR00897 136 QDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-----EMNTLW-SALAFVLTGGVIALFSNKDIFTPQHMQ-T---R 205 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----hHHHHH-HHHHHHHHHHHHHHhccCCCCCccccc-C---C
Confidence 4679999999999988886 577776544332111 011111 112222333333333 33322111111 0 0
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhh-Hhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL-QQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~-~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
++..+.++ ....+++||+.+++....+.... ..++. ...| .+... .| ..+.+.+....+++..+++.+.|+
T Consensus 206 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~ 279 (402)
T TIGR00897 206 EKFSELGK---AATILFTNPNVLLGGMVRIINTIGLFGFA-VFLP-MFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGI 279 (402)
T ss_pred cchhhHHH---HHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHHH-HHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122 22346789987655433222111 11111 1111 12111 23 244567777888999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK 259 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~ 259 (312)
+.||++||++....+.+.......... ..+.... ...+..++..+++|++.+.+... .+++.+..|+++..++++.+
T Consensus 280 l~dr~~~~~~~~~~~~l~~~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~ 356 (402)
T TIGR00897 280 VGDKLGWMNTVRWFGGVGCGIFTLALY-YIPQHFG-HSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPKHKGAAMSVLN 356 (402)
T ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHH-HHHHccC-CcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcchhHHHHHHHH
Confidence 999998765443232222221111111 1111000 01234556778888887776543 45666667777778999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
..+.+|..++-.+.+.+
T Consensus 357 ~~~~lg~~~gp~i~g~l 373 (402)
T TIGR00897 357 LSAGLSAFLAPAIAVLF 373 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999988887776654
No 14
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.15 E-value=2e-08 Score=93.90 Aligned_cols=230 Identities=11% Similarity=0.037 Sum_probs=119.4
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++|++..++.......+.++|.++...+....+ .+..|.+..++.+++.++. .++|++.++++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 176 (377)
T PRK11102 109 PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS------WHAIFWVLALAAILAAALVFFFIPETLPKERRQ------ 176 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------hHHHHHHHHHHHHHHHHHHHHhCCccCcccccC------
Confidence 34679999999999999999999988765543211 2455666666666655443 4455433222111
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhh-hhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~-G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+...+++.++..+.+++|+.+......... .....+.. ..+..+.. .....++.|++....+++.++++++.|++
T Consensus 177 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 253 (377)
T PRK11102 177 --PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLT-AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF 253 (377)
T ss_pred --CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223334445677888865443322211 11122211 11111110 11223567888889999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK 259 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~ 259 (312)
.||+++|+ .+..+.++.... .........+.. .+...+...+++.+.+.........+.+..|++...+.+...
T Consensus 254 ~~r~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 328 (377)
T PRK11102 254 VRRVGALN-MLRFGLWIQFIMGIWLVVSALLDLG----FWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAG 328 (377)
T ss_pred HHHhCHHH-HHHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHH
Confidence 99998765 434444332221 111111111110 122222333344444444444444555556666656677665
Q ss_pred HHH-HHHHHHHHHhh
Q 021469 260 VWQ-CASIAVVFFIG 273 (312)
Q Consensus 260 ~~q-s~g~ai~f~~~ 273 (312)
... ++|..++-...
T Consensus 329 ~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 329 TLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 543 34554444443
No 15
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.14 E-value=4.3e-08 Score=95.38 Aligned_cols=270 Identities=16% Similarity=0.168 Sum_probs=160.7
Q ss_pred eechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCC-C-chhhHH-HHHHHHHHHHHHHHhccCCccccc-cchhhcchh
Q 021469 28 IGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTS-G-TTLLFI-VFLGVITLGTILMCFLRKEEDKGE-KETADASVN 103 (312)
Q Consensus 28 ~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~-~-~~~~~~-if~~i~~~g~~l~lfL~~~~~~~~-~~~~~~~~~ 103 (312)
++|-+|.=|++-..|.++--++...+....++..++ . .+..+. +=.--.+.+.+.++++|++++.+. +...+ .
T Consensus 186 ~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---~ 262 (477)
T PF11700_consen 186 RGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---Y 262 (477)
T ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---H
Confidence 499999999999988888777776665433321111 1 122221 112223456666777776654221 11110 1
Q ss_pred hhhHHHHHHHHHHHh-hcChhhHH-HHHHHHh-hhhHhhhhh-hccccccccccccc--chhhHHHHHHhHHHHHHHHHH
Q 021469 104 FYSYLVSLSKSITTL-LADVRMLL-IIPLFAY-SGLQQAFVW-AEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAA 177 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~-~~~~~~ll-l~p~~~~-~G~~~~f~~-~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~ 177 (312)
-..++ +++.+++|. -+.|++.. |+-.++| -|+..-... +.|.+. .+|. .++..+.++..+..++|+++.
T Consensus 263 ~~~g~-~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~----~lg~s~~~l~~~~l~~~i~a~~Ga~~~ 337 (477)
T PF11700_consen 263 LRFGF-KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATE----VLGMSTTQLIVFGLVVQIVAIIGALLF 337 (477)
T ss_pred HHHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233 334445553 44555432 2222333 343322222 234332 2232 345566667788899999999
Q ss_pred hhhhcCCCCh--hhHHHHHHHHHHHHHHHHHhcccCCC-CCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hh
Q 021469 178 GRLTTGLPSI--TFIVSGGAIAQVVVFLWILINYSVTS-GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EG 253 (312)
Q Consensus 178 G~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~ 253 (312)
|++.||++.| +.+ .+..++....-++.++-..++. ...+++-.+++++++|+.-+..|...-++++++-|+++ .+
T Consensus 338 g~l~~r~g~k~~~~l-~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~e 416 (477)
T PF11700_consen 338 GWLQDRFGPKTKRTL-LISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAE 416 (477)
T ss_pred HHHHHHhCCchhHHH-HHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhH
Confidence 9999999865 433 3333333222122222111111 11223558899999999999999999999999998766 47
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 021469 254 AFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGILFLTIQVEKA 306 (312)
Q Consensus 254 afa~~~~~qs~g~ai~f~~~~~l-----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~ 306 (312)
.|++|.+..=.++.++=++-+.+ +.+..+..+.++++++++.+..++..+.|+
T Consensus 417 fFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 417 FFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 89999999888888886655533 356678888899999999998887766655
No 16
>PRK03699 putative transporter; Provisional
Probab=99.12 E-value=1.6e-08 Score=95.67 Aligned_cols=243 Identities=14% Similarity=0.027 Sum_probs=126.2
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+++|++..+........+..++..+...+.... ...+..|.+..++.++..++.++.+.|+.++++++++ +
T Consensus 126 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~----~ 196 (394)
T PRK03699 126 GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS-----IEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKAD----K 196 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHHhcCCccccccCcccc----C
Confidence 356888888887778888878777665443211 1134556555555555444444444343222111000 0
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
++ .+...+++..++.- .+++...+.++. +-.| .+..+..| .++.+.+..+++++.++|.++.|++.
T Consensus 197 -----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~ 265 (394)
T PRK03699 197 -----PV----AKEKWGIGVLFLAIAALLYILAQLTFI-SWVP-EYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIV 265 (394)
T ss_pred -----cc----ccccCChHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 11112344332221 222222222221 1111 12222223 34567788888999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW 261 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~ 261 (312)
||+++|+.+. ....+......+ + ...++ +....+..+.+|++-+...+...+...+..|++.+...+.....
T Consensus 266 dr~~~~~~l~-~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 337 (394)
T PRK03699 266 RFFDLQRILT-VLAGLALVLMYL-F-VNTDD-----PSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTC 337 (394)
T ss_pred HHhchhhHHH-HHHHHHHHHHHH-H-HHcCC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHh
Confidence 9998765333 222222222211 1 12222 12344566778887666666666666666676655667777777
Q ss_pred HHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHH
Q 021469 262 QCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVG 295 (312)
Q Consensus 262 qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~ 295 (312)
..+|..++-.+.+.+ +.+..+++..++++++.+.
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 778887776665543 2333344444444444443
No 17
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.11 E-value=8.1e-09 Score=100.11 Aligned_cols=262 Identities=9% Similarity=-0.068 Sum_probs=131.4
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-Hhcc-CCccccccc-hh--
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLR-KEEDKGEKE-TA-- 98 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~-~~~~~~~~~-~~-- 98 (312)
++++||+..|++....+++.++|+++...+...... +..+..|.+..++.++-.++. .+++ +|++....+ ++
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~---~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~ 228 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD---GHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF 228 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc---CcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc
Confidence 346899999999999999999999887554432110 012334444444444333333 3333 333211000 00
Q ss_pred -----hcc---hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH-h--hhhhhccccccccccccc--chhhHHHHH
Q 021469 99 -----DAS---VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-Q--AFVWAEFTKEIVTPALGV--SGVGGAMAV 165 (312)
Q Consensus 99 -----~~~---~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~-~--~f~~~~~~~~~~s~~lg~--~~~g~v~~~ 165 (312)
+.+ ++++.+.++.+++ +.++||++..+....+..... . ..|...| ..+..|. ...+..+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~y----l~~~~g~s~~~a~~~~~~ 302 (467)
T PRK09556 229 GEPISEEDKETESTDMTKWQIFVE--YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVY----AFQELGFSKEDAINTFTL 302 (467)
T ss_pred cCccchhhhccccccCcHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHccCCCHHHHHHHHHH
Confidence 000 0001111222211 267888876554433222211 1 1111112 1222233 456777778
Q ss_pred HhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 166 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 166 ~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
..++.+++..+.|++.||+++|+..+. ..........+......++ +...++..++.|++.....+..+....+
T Consensus 303 ~~~~~~ig~~~~G~lsDr~g~r~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 376 (467)
T PRK09556 303 FEIGALVGSLLWGWLSDLANGRRALVA-CIALALIIFTLGVYQHATS-----EYMYLASLFALGFLVFGPQLLIGVAAVG 376 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHH-HHHHHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 888999999999999999987653332 2212111211111111111 2234456666776544444444455557
Q ss_pred hccCCh-hhhHHHHHHHHHH-HHHHHHHhhhhh----------------hHHHHHHHHHHHHHHHHHHHHHhh
Q 021469 246 LFKHDT-EGAFAQLKVWQCA-SIAVVFFIGPYI----------------SLQAMLIVMVVGICVALVGILFLT 300 (312)
Q Consensus 246 ~~~~~~-~~afa~~~~~qs~-g~ai~f~~~~~l----------------~~~~~~~il~~~~~~~~~~~~~~~ 300 (312)
.+|++. ..+.++.+...++ |.+++-.+-+.+ ....-+.++.+..+++.+.+..+.
T Consensus 377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 777544 6789999988886 544433322221 123334444456666666666553
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.11 E-value=4.1e-08 Score=93.21 Aligned_cols=224 Identities=11% Similarity=0.016 Sum_probs=132.0
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~ 103 (312)
+++++++..++.+...+.+.++|..+...+....+ .+..|.+..++.++..+... ...|+++++++ +
T Consensus 138 ~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g------w~~~f~~~~~l~~~~~l~~~-~~~p~~~~~~~------~ 204 (394)
T PRK10213 138 PPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG------WRNVFNAAAVMGVLCIFWII-KSLPSLPGEPS------H 204 (394)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------HHHHHHHHHHHHHHHHHHHH-HHCCCCCcccc------c
Confidence 35689999999999999999999999877654321 24455555444443332221 11232221111 0
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHH-HHhhhhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~-~~~~G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
+. ++..+.+++|+++.+... +...+...++. ...+..+.. .-++.+..|+++..++++.++++++.|++.
T Consensus 205 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~ 276 (394)
T PRK10213 205 QK-------QNTFRLLQRPGVMAGMIAIFMSFAGQFAFF-TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFIL 276 (394)
T ss_pred ch-------hHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 123456788887654332 22222111111 111111211 112335678889999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW 261 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~ 261 (312)
||.+ |+.++....+.....+.+. .+.++ ++...+..+++|++.+..+....+.+.+..||+..++.+.....
T Consensus 277 ~r~~-~~~l~~~~~~~~~~~~~l~--~~~~~-----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (394)
T PRK10213 277 KRSV-KLALAGAPLVLAVSALVLT--LWGSD-----KIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAV 348 (394)
T ss_pred hccc-hhHHHHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHH
Confidence 9854 3323222222222222221 12222 23455678889999999888888888888887666677777778
Q ss_pred HHHHHHHHHHhhhhh
Q 021469 262 QCASIAVVFFIGPYI 276 (312)
Q Consensus 262 qs~g~ai~f~~~~~l 276 (312)
.++|..++-.+.+.+
T Consensus 349 ~~lg~~~G~~l~G~l 363 (394)
T PRK10213 349 IQLANTCGAAIGGYA 363 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888887765
No 19
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.11 E-value=2.7e-08 Score=93.84 Aligned_cols=225 Identities=11% Similarity=-0.011 Sum_probs=134.7
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Cccccccchhhcchhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNF 104 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~~~~~~~~~~~~ 104 (312)
+++++..|+.-.....+.++|..+...+....+ .+..|.+...+..+.. +...+++ ++++++++ + ++
T Consensus 124 ~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g------~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~ 191 (382)
T TIGR00902 124 KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD------EQNILAILTAGLAFML-IGFLIKPTIPPKDAIP-E----DE 191 (382)
T ss_pred HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC------hhHHHHHHHHHHHHHH-HHHHcCCCCCCCcccc-c----cc
Confidence 467888999888889999999988776654322 1234444433322222 2223332 22211111 0 00
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTT 182 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d 182 (312)
. ++.++..+++|||+.+.+....+......+.+.+..+ .+..+ .| ...+|+++....++|+++..+.+++.|
T Consensus 192 ~----~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~ 265 (382)
T TIGR00902 192 S----QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSA-IYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQ 265 (382)
T ss_pred c----ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 0 1122345678999886655443332222222223222 12222 23 346888888999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHH-H
Q 021469 183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK-V 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~-~ 260 (312)
|++.|+ ++.++.+.....+... .+.++ ++..++.-+++|++-+.........+.+. |++. ..+.+++. .
T Consensus 266 r~g~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 266 NCSARD-LLLISAIACVGRWAII--GAIEA-----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred hCCHHH-HHHHHHHHHHHHHHHH--HhHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHH
Confidence 998665 5556666666555432 22222 24467778999999999888888788776 5433 34566765 3
Q ss_pred HHHHHHHHHHHhhhhhh
Q 021469 261 WQCASIAVVFFIGPYIS 277 (312)
Q Consensus 261 ~qs~g~ai~f~~~~~l~ 277 (312)
...+|.+++-.+++.+.
T Consensus 337 ~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIY 353 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56678888888877653
No 20
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.10 E-value=9.8e-08 Score=90.60 Aligned_cols=229 Identities=15% Similarity=0.108 Sum_probs=120.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+++|+++.++....+..+.++|+.+...+.... ...+..|.+..++..+..+..+++|+|++++++++ +.
T Consensus 125 ~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~-----~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~-----~~ 194 (402)
T PRK11902 125 PEERGAGAAVKVLGYRLAMLVSGGLALWLADRV-----LGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR-----SL 194 (402)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc-----cCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc-----hh
Confidence 467999999999999999999988776664321 01355666666655555554556665544322110 01
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhH-HHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGA-FDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~-~~~ig~~~~G~l~ 181 (312)
+++.++. ..+++++|+.+.++...+.......+..+..+. +..+..| .+.+|+++...+. +++++..+.|++.
T Consensus 195 ~~~~~~~---~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~ 270 (402)
T PRK11902 195 GEAVVGP---LRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT-FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLM 270 (402)
T ss_pred HHHHHHH---HHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH-HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1112222 334678887654433322222111111111111 1112223 3457777766654 5899999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHH----HHHHhhhhHHhhhhHhHHHHhccCChhhhHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMA----ALLGIGDGVLNTQLSALLGILFKHDTEGAFA 256 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa 256 (312)
||+++|+.+ .++.+....... +......+++ .+...+.. +..|++.+..++....++.+.+|++ .++
T Consensus 271 ~r~g~~~~l-~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~ 342 (402)
T PRK11902 271 VRLGLYRSL-MLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT---QYA 342 (402)
T ss_pred HHHhHHHHH-HHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHH
Confidence 999866533 333333322221 1111222221 12222222 4556667776777777777666533 345
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 021469 257 QLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 257 ~~~~~qs~g~ai~f~~~~~ 275 (312)
.+....++|..++-.+++.
T Consensus 343 ~~~~~~~l~~~~~~~~~G~ 361 (402)
T PRK11902 343 LLSALASVGRVYVGPTSGY 361 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5555666666544444443
No 21
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.10 E-value=9.7e-09 Score=97.99 Aligned_cols=232 Identities=11% Similarity=0.020 Sum_probs=128.8
Q ss_pred eeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhh
Q 021469 27 VIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYS 106 (312)
Q Consensus 27 ~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~ 106 (312)
++|+..|..-...+.+..+|..+...+... + .+..|.+..++.++..++.+++++++++++++.++.+.++
T Consensus 138 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (420)
T PRK09528 138 RSGFEYGRARMWGSLGWALCAFIAGILFNI-N------PQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANA-- 208 (420)
T ss_pred hccccchhhHHhhhHHHHHHHHHHHHHHhc-C------chHhHHHHHHHHHHHHHHHhcccccccchhhhccchhccc--
Confidence 457777877777888999998887655321 1 1235555555555555555555443332221111000001
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhh---hccccc-ccccccccchhhHHHHHHhHHHHHHHHHHhhhhc
Q 021469 107 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW---AEFTKE-IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 182 (312)
Q Consensus 107 s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~---~~~~~~-~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d 182 (312)
.++..++..+.++||+++.++.......+...... ..|-.. +.....+....|++..+.++.++++.++.|++.|
T Consensus 209 -~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d 287 (420)
T PRK09528 209 -SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN 287 (420)
T ss_pred -ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234455567888887544432221111111111 111111 1111223356788888899999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh-hhHHH-HHH
Q 021469 183 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKV 260 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~-~afa~-~~~ 260 (312)
|+++|+. +..+.++....+.+. .+.++ ++......++.|++.+.........+.+.+|++.. .+.+. ++.
T Consensus 288 r~g~~~~-~~~~~~l~~~~~~l~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 359 (420)
T PRK09528 288 RIGAKNA-LLLAGTIMAVRIIGS--GFATG-----PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQF 359 (420)
T ss_pred HhCcchh-hHHHHHHHHHHHHHH--Hhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHH
Confidence 9987763 334444433333322 22222 23455667888888888777777777887876542 33333 666
Q ss_pred HHHHHHHHHHHhhhhh
Q 021469 261 WQCASIAVVFFIGPYI 276 (312)
Q Consensus 261 ~qs~g~ai~f~~~~~l 276 (312)
...+|..++..+.+.+
T Consensus 360 ~~~lg~~ig~~~~G~l 375 (420)
T PRK09528 360 AKQLGAVFLSTLAGNL 375 (420)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777888877776654
No 22
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.10 E-value=1.5e-09 Score=99.86 Aligned_cols=230 Identities=19% Similarity=0.190 Sum_probs=129.6
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++|++..|+.....+.+.++|..+...+....+ .+..|.+..++.++..++. +++++++++++++.++++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~------~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~ 188 (352)
T PF07690_consen 115 PPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG------WRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE 188 (352)
T ss_dssp CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH------HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT
T ss_pred hhhhhhhccccccchhhhhhhcccchhhhhhhccc------cccccccccchhhhhhhhHhhhhhhcccccccccccccc
Confidence 34689999999999999999999999877753211 2345666666676666543 3444333332222111110
Q ss_pred hhhhHHHHHHHHHHHhh-cChhhH-HHHHHHHhhhhHhh--hhhhcc-cccccccccccchhhHHHHHHhHHHHHHHHHH
Q 021469 103 NFYSYLVSLSKSITTLL-ADVRML-LIIPLFAYSGLQQA--FVWAEF-TKEIVTPALGVSGVGGAMAVYGAFDAICSLAA 177 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~-~~~~~l-ll~p~~~~~G~~~~--f~~~~~-~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~ 177 (312)
...+++.++.+|.+ ++|.++ +++..+........ .+...| .+.+.-+ |....+..+.+.++..++++.+.
T Consensus 189 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 263 (352)
T PF07690_consen 189 ---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFS--GPSQAGLLFSIFGIVGIIGSLLA 263 (352)
T ss_dssp -----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC--THHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111222234433 344333 22222222111111 111122 1111111 23466777888899999999999
Q ss_pred hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHH
Q 021469 178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA 256 (312)
Q Consensus 178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa 256 (312)
|++.||+++|+....... .......... ..+... ++.+..+..+++|++.+..+.....++.+..|++ ...+.+
T Consensus 264 ~~l~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 338 (352)
T PF07690_consen 264 GRLSDRFGRRRRLLIAIL-LLILGALGLL-LLPFSS---SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFG 338 (352)
T ss_dssp HHHHHHTTCHHHHHHHHH-HHHHHHHHHC-CSHHHC---HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHH-HHHHHHHHHH-HHHHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999886543332222 2222222111 111110 1235666888899999999999999999998754 468999
Q ss_pred HHHHHHHHHHHHH
Q 021469 257 QLKVWQCASIAVV 269 (312)
Q Consensus 257 ~~~~~qs~g~ai~ 269 (312)
+....+++|..++
T Consensus 339 ~~~~~~~~~~~ig 351 (352)
T PF07690_consen 339 LFNSIGSLGGIIG 351 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC
Confidence 9999999988764
No 23
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.09 E-value=2.4e-08 Score=94.09 Aligned_cols=227 Identities=11% Similarity=-0.011 Sum_probs=126.6
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 105 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~ 105 (312)
+++++..|.......++..+|..+...+....+ .+..|.+..+...+..+...+.|+++++++++ + ..+
T Consensus 124 ~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~- 192 (382)
T PRK11128 124 KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG------EQAILWILTAGVASMLLGQLLRPTIMPQGESR-Q---QES- 192 (382)
T ss_pred hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC------hhHHHHHHHHHHHHHHHHHHccCCCCCccccc-c---ccc-
Confidence 346677777777778999999998877754321 23344444433333333333333322211111 0 000
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469 106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 184 (312)
Q Consensus 106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~ 184 (312)
+. .++..+.++||+.+.+....+..+..........+ .+..+ ....+.+|+.+.+..+++++...+.|++.||+
T Consensus 193 -~~---~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 267 (382)
T PRK11128 193 -AG---WPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSA-IYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW 267 (382)
T ss_pred -cc---cchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHH-HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 00 12234567888876655433332222211111111 11111 11234678888888899999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHH-HHHH
Q 021469 185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK-VWQC 263 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~-~~qs 263 (312)
++|+ .+..+.+.....+... .+.++ ++...+..+++|++.+..+......+.+.-+++..++.+.+. ..++
T Consensus 268 ~~~~-~l~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (382)
T PRK11128 268 SARD-LLLLSAICGVVRWGLM--GSTTA-----LPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMG 339 (382)
T ss_pred CHHH-HHHHHHHHHHHHHHHH--Hhhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHH
Confidence 8665 4445555544444322 22222 344667888999998888777777776654444445667665 4455
Q ss_pred HHHHHHHHhhhhh
Q 021469 264 ASIAVVFFIGPYI 276 (312)
Q Consensus 264 ~g~ai~f~~~~~l 276 (312)
+|.+++-.+.+.+
T Consensus 340 ~g~~ig~~i~G~l 352 (382)
T PRK11128 340 GSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 6667777766654
No 24
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.09 E-value=7.3e-08 Score=91.45 Aligned_cols=229 Identities=14% Similarity=0.089 Sum_probs=129.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
|+++++..|+.....+.+.++|..+.-.+.... ....+.+...+..++.+....+|+++.++++.+. +
T Consensus 119 ~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-------~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~ 186 (393)
T PRK11195 119 GEKLVKANGWMEGSTIAAILLGTVLGGALADPH-------AEAALAVCALIYLLAALFNLFIPRLGARRPGQSW-----N 186 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCcccccccCC-----C
Confidence 468999999999999999999988876654321 1223333333333344434556543322111100 0
Q ss_pred hhHHHHHHHHHH-HhhcChhhHHHHHHH-HhhhhHhhhhhh--cccccccccccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 105 YSYLVSLSKSIT-TLLADVRMLLIIPLF-AYSGLQQAFVWA--EFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 105 ~~s~~~~~~~~~-~~~~~~~~lll~p~~-~~~G~~~~f~~~--~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+....+++++-. .++++|+.....-.. +..+........ .+.+... -.+..+.|+++..++++.++++++.+++
T Consensus 187 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--g~s~~~~G~~~~~~~~g~i~g~~~~~~l 264 (393)
T PRK11195 187 PIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVAL--GITLNQPAYLQAVVAIGIAVGAGAAARL 264 (393)
T ss_pred HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122222222 346677654332221 111211111111 1111110 0123468999999999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--hhhHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQL 258 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--~~afa~~ 258 (312)
.||.++|+ ++..+..... ... .+ ..+++ ++...+..+++|++.+..+....+.+.+.-|++. .+++++.
T Consensus 265 ~~~~~~~~-~~~~g~~~~~-~~~-~~-~~~~~-----~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~ 335 (393)
T PRK11195 265 VTLETVLR-VLPAGILMGL-VVL-LM-ALQHS-----LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQ 335 (393)
T ss_pred hcCCcccc-hHHHHHHHHH-HHH-HH-HHHhH-----HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHH
Confidence 99876554 4444433222 111 11 12221 2335566778899988888877777766555433 5689999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 021469 259 KVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 259 ~~~qs~g~ai~f~~~~~l 276 (312)
+..+.+|..++..+...+
T Consensus 336 ~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 336 NFNENLAMLLMLGLYSLL 353 (393)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999999888876643
No 25
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.09 E-value=1.3e-08 Score=94.66 Aligned_cols=230 Identities=12% Similarity=0.084 Sum_probs=125.6
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC--CcCCCCchhhHHHHHHHHHHHHHHHHhc-cCCccccccchhhcc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMCFL-RKEEDKGEKETADAS 101 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~--~~~~~~~~~~~~if~~i~~~g~~l~lfL-~~~~~~~~~~~~~~~ 101 (312)
+++|++..|+.......+.++|+.+...+..... +......+..|.+..++.+++.+..+++ ++|++.+ ++++
T Consensus 114 ~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~-~~~~--- 189 (356)
T TIGR00901 114 DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDA-SVPK--- 189 (356)
T ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccc-ccch---
Confidence 4789999999999999999999988866543321 1111124667777777666665554543 4432211 1110
Q ss_pred hhhhhHHHHHHHHHHHhhcChh---hHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHh-HHHHHHHHHH
Q 021469 102 VNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYG-AFDAICSLAA 177 (312)
Q Consensus 102 ~~~~~s~~~~~~~~~~~~~~~~---~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g-~~~~ig~~~~ 177 (312)
+++.+.++.+++ ++++|+ .+.+....+..........+..+.-+...-.+.++.|.+...++ +..+++.++.
T Consensus 190 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~ 265 (356)
T TIGR00901 190 -PLTQAVLKPIRE---FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIG 265 (356)
T ss_pred -hHHHHHHHHHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHH
Confidence 111223333333 344443 43332222211221111112122111111112345677777666 4678999999
Q ss_pred hhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCC-C--CCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-h
Q 021469 178 GRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVT-S--GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E 252 (312)
Q Consensus 178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~ 252 (312)
|++.||+++|+.+ ..+.++....+... +.....+ . +..+.+....+.++.+++.+..+.....++.+.+|++. .
T Consensus 266 g~l~~r~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g 344 (356)
T TIGR00901 266 GIIMQPLNILYAL-LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGA 344 (356)
T ss_pred HHHHhhhhHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccH
Confidence 9999999876544 34444433333321 1110000 0 00112345667788899999999999999999998665 5
Q ss_pred hhHHHHHHHHH
Q 021469 253 GAFAQLKVWQC 263 (312)
Q Consensus 253 ~afa~~~~~qs 263 (312)
+.++++...++
T Consensus 345 ~~~g~~~~~~~ 355 (356)
T TIGR00901 345 TQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHh
Confidence 77888776554
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.07 E-value=1.1e-07 Score=89.89 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=89.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+..+.....++++.+++.++.|++.||+++|+ .+..+..+....+.... ..++ ++...+..+++|++.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~G~~~~~~~ 320 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGLR-VAIVSLLVEILGLLLLW--LAPS-----PWMALIGAALTGFGFSLVF 320 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHhHHHHH
Confidence 34456667788899999999999999988665 44444444333333221 2222 2345566788999888777
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVEKAF 307 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~ 307 (312)
........+..|++ +.++.+++.....+|.+++-.+.+.+ ..+..+.+..++.+++++.......+.+|++
T Consensus 321 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 321 PALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 66666666777644 46889999999998887765554443 2333344444555555555554444444433
No 27
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.07 E-value=3.6e-08 Score=95.33 Aligned_cols=245 Identities=13% Similarity=0.055 Sum_probs=120.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCC--cCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----cccchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKETA 98 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~--~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~~~~ 98 (312)
+++||+..|+.......+.+++.++...+...... ......+..|.+..+..++..+..+++|+..+. ++.|+.
T Consensus 151 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~ 230 (479)
T PRK10077 151 AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQA 230 (479)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHH
Confidence 36799999998888888888777666555432110 011234556666666666665556677654321 111110
Q ss_pred h-----c-chhhhhHHHHHHHHHHH--hhcChhhHHHHHHHHhhhhHhhhhh---h-----ccccccccccccc--chhh
Q 021469 99 D-----A-SVNFYSYLVSLSKSITT--LLADVRMLLIIPLFAYSGLQQAFVW---A-----EFTKEIVTPALGV--SGVG 160 (312)
Q Consensus 99 ~-----~-~~~~~~s~~~~~~~~~~--~~~~~~~lll~p~~~~~G~~~~f~~---~-----~~~~~~~s~~lg~--~~~g 160 (312)
+ . ..++.....++.++..+ ..++++.+.+....+..++..+... + .+...+. ...|. ...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~ 309 (479)
T PRK10077 231 EGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIAL 309 (479)
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHH
Confidence 0 0 00011111222222221 1111221111111111111111100 0 0111111 11222 2334
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhh-HHhhhh
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG-VLNTQL 239 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~-~~~t~~ 239 (312)
......++.+++++++.|++.||++||+ +++.+.++...+.........++.. ..+.....++++++-+ .+.+..
T Consensus 310 ~~~~~~~~~~~i~~~~~g~l~dr~g~r~-~~i~~~~~~~v~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 385 (479)
T PRK10077 310 LQTIIVGVINLTFTVLAIMTVDKFGRKP-LQIIGALGMAIGMFSLGTAFYTQAP---GIVALLSMLFYVAAFAMSWGPVC 385 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChH-HHHHhHHHHHHHHHHHHHHHhcCcc---cHHHHHHHHHHHHHHhccccchh
Confidence 5666788899999999999999998775 5455555544443322211111110 1123333334444333 244567
Q ss_pred HhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 240 SALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 240 ~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+.++.+.+|. ++..++++....+.+|..++-.+.+
T Consensus 386 ~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 386 WVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred HHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 7888888974 4567899999999988887754444
No 28
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.07 E-value=4.8e-08 Score=93.53 Aligned_cols=227 Identities=9% Similarity=-0.013 Sum_probs=130.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+..+.|..|. .|.++|+++.-.+ .... . +..+.+..++.++..++.+++|++++.+++ ++
T Consensus 131 ~~~~~r~~G~------lG~~ig~~l~g~l-~~~~-----~-~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~--~~----- 190 (418)
T TIGR00889 131 DFPPIRVMGT------IGFIAAMWAVSLL-DIEL-----S-NIQLYITAGSSALLGVFALTLPDIPVAKST--AK----- 190 (418)
T ss_pred cCCCeeeehh------HHHHHHHHHHHHh-cccc-----h-hHHHHHHHHHHHHHHHHHhcCCCCCCCccc--cc-----
Confidence 3456777773 5777777766544 1111 0 122334444444444444556554221111 10
Q ss_pred hhHHHHHH-HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccc---ccc-cc----ccccchhhHHHHHHhHHHHHHHH
Q 021469 105 YSYLVSLS-KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK---EIV-TP----ALGVSGVGGAMAVYGAFDAICSL 175 (312)
Q Consensus 105 ~~s~~~~~-~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~---~~~-s~----~lg~~~~g~v~~~~g~~~~ig~~ 175 (312)
.+.+++. .+..+++|||+...+....+..+....+....++. ... +. ..+.+.+++.+.+..+.++++.+
T Consensus 191 -~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~ 269 (418)
T TIGR00889 191 -MSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL 269 (418)
T ss_pred -cCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 0111111 11235688999765555555544333222221111 110 11 01235678999999999999999
Q ss_pred HHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhh
Q 021469 176 AAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGA 254 (312)
Q Consensus 176 ~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~a 254 (312)
..|++.||+++|+ ++.++.++....+.+.. ...++. ...+..++..++.|++.+..+.....++.+.+|++ +.++
T Consensus 270 ~~g~l~dr~g~r~-~l~~~~~~~~v~~~l~~-~~~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~ 345 (418)
T TIGR00889 270 TIPFFLKRFGIKK-VMLLSLVAWALRFGFFA-YGDPEY--FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA 345 (418)
T ss_pred HHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH-HcCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 9999999998775 55566655554443322 111111 01123456788899998888888888888988854 4678
Q ss_pred HHHHH-HHHHHHHHHHHHhhhhh
Q 021469 255 FAQLK-VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 255 fa~~~-~~qs~g~ai~f~~~~~l 276 (312)
+++.. ..+++|.+++-.+.+.+
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 99997 57889999988887764
No 29
>PRK11043 putative transporter; Provisional
Probab=99.06 E-value=9.9e-08 Score=90.29 Aligned_cols=226 Identities=12% Similarity=0.026 Sum_probs=123.5
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++++++..+..+.....+..+|.++...+....+ .+..|.+..++.++..+...++++++++++++ ++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 192 (401)
T PRK11043 125 AQKANRVFATIMPLVALSPALAPLLGAWLLNHFG------WQAIFATLFAITLLLILPTLRLKPSKKARKQS------QD 192 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHcCCCCCccccc------hH
Confidence 3457788888888888888888888766543211 24556666666666655555554332211110 11
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 183 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~ 183 (312)
+ ++..+.+++|+.+.....+ ...+...++. ...+..+.....+....|+.++.++++.++|+++.+++.||
T Consensus 193 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r 264 (401)
T PRK11043 193 A-------LTFKQLLKSKTYLGNVLIFAACSAAFFAWL-TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK 264 (401)
T ss_pred H-------HHHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1233456677754322221 1122212221 11111111111123456777888888999999999999999
Q ss_pred CCChhhHHHHHHHHHHHH-HH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469 184 LPSITFIVSGGAIAQVVV-FL-WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW 261 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~ 261 (312)
+++|+.. ....+....+ .. +......++ + ++...+...++|++.+...........+..|+++.++.++.+..
T Consensus 265 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 339 (401)
T PRK11043 265 WGGEQLL-PWLLVLFAVSVIAIWLASLLSHP-S---LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTL 339 (401)
T ss_pred cCHHHHH-HHHHHHHHHHHHHHHHHHHhccC-c---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHH
Confidence 8765422 2222222111 11 111111111 1 12344456677888777777766666666777777899999998
Q ss_pred HHHHHHHHHHhhhh
Q 021469 262 QCASIAVVFFIGPY 275 (312)
Q Consensus 262 qs~g~ai~f~~~~~ 275 (312)
+..+...+-.+.+.
T Consensus 340 ~~~~~~~~~~~~g~ 353 (401)
T PRK11043 340 QLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHHHHHHHHH
Confidence 87666666655554
No 30
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.06 E-value=4.6e-08 Score=91.14 Aligned_cols=218 Identities=15% Similarity=0.100 Sum_probs=121.9
Q ss_pred chhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchhhcchhhhhHH
Q 021469 30 SFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYL 108 (312)
Q Consensus 30 ~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~~~~~~~~~s~ 108 (312)
.+.++.....+.+.++|..+...+.... ..+..|.+..++.++..++.. ++|+++++++++. +.
T Consensus 125 ~~~~~~~~~~~~g~~ig~~~~~~l~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--- 189 (375)
T TIGR00899 125 MFSSVMRAQISLAWVIGPPLAFWLALGF------GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL------TR--- 189 (375)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc------Cc---
Confidence 3467777777888888888776654321 134566666666665555543 4665332221110 01
Q ss_pred HHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469 109 VSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLP 185 (312)
Q Consensus 109 ~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~ 185 (312)
++.+ +.+++|+.+.+.... +..+....+. ...+. +..+..| ..+.|..+....+...++..+.|++.||++
T Consensus 190 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g 263 (375)
T TIGR00899 190 -LEVR---GLLASRDTRLLFVACTLMWGCNILYI-INMPL-LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFG 263 (375)
T ss_pred -chhh---hhhcCcchHHHHHHHHHHHHHHHHHH-hhhHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 1111 245566654433222 1111111111 11111 1111122 345677776677778888899999999998
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHH
Q 021469 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS 265 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g 265 (312)
+|+ .+.++.+.....+... ...++ .+...+..++.|++-+..+...+....+..|++...+.+++.....+|
T Consensus 264 ~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 264 KRR-LMLLAALAGVAFYTGL--AADNS-----LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVG 335 (375)
T ss_pred chh-HHHHHHHHHHHHHHHH--HHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 765 3334433332222221 11111 133455667777777777777777777888877778899999999999
Q ss_pred HHHHHHhhhhh
Q 021469 266 IAVVFFIGPYI 276 (312)
Q Consensus 266 ~ai~f~~~~~l 276 (312)
..++-.+.+.+
T Consensus 336 ~~~g~~~~g~~ 346 (375)
T TIGR00899 336 WIIAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHH
Confidence 99888777654
No 31
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.05 E-value=6.1e-08 Score=95.30 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=140.2
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~ 103 (312)
+++..+.+++--..++.+.++|..++-.+....+. ...|.+-.+ +.+..+.+ ..+++ +.++++ .
T Consensus 134 ~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~------~~~f~inal-sfl~~i~~l~~~~~-~~~~~~-------~ 198 (524)
T PF05977_consen 134 KEDLPAANALNSISFNIARIIGPALGGILVAFFGA------AAAFLINAL-SFLISILALLRWKP-PPPPSS-------L 198 (524)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH------HHHHHHHHH-HHHHHHHHHHHccc-cccccc-------c
Confidence 35677778888888888888888777665432211 123333222 22222222 23332 221111 1
Q ss_pred hhhHHHHHHHHHHHhhc-ChhhHHHHHHHHhhhhHhhhhhhccccccccccc--ccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 104 FYSYLVSLSKSITTLLA-DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~-~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~l--g~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+++++.+++++-++..+ +|.++..+......++..+-.....| .+..+.+ |....|+++.++|++.++|+++.+++
T Consensus 199 ~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlP-l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l 277 (524)
T PF05977_consen 199 PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLP-LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRL 277 (524)
T ss_pred chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhh-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12346677777788644 66665554444444443333333332 1222222 34567999999999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLK 259 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~ 259 (312)
.+|+++++ ++..+.+....+.+.. ...++ .++..+..++.|++....++..++++....|++ ..+++++++
T Consensus 278 ~~~~~~~~-lv~~~~~~~a~~~~~l--al~~~-----~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~ 349 (524)
T PF05977_consen 278 RRRLSSRR-LVLLASLLFALALLLL--ALSPS-----FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQ 349 (524)
T ss_pred hcccCcch-hhHHHHHHHHHHHHHH--hcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHH
Confidence 88876544 4445554443332221 22222 245677888899999999999998888888765 478999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
.....+.+++..+.+.+
T Consensus 350 ~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 350 MVFFGGMPLGSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999988887764
No 32
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.03 E-value=5.1e-08 Score=91.81 Aligned_cols=219 Identities=13% Similarity=0.083 Sum_probs=117.6
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+++|++..|++....+.+..+|..+...+..... ....+.. .+.+.+.+..++.+.++++++++ +
T Consensus 125 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~ 189 (381)
T PRK03633 125 SRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM------SVLPWVT--GLVLAAILPLLFTRILNQQAENH-------D 189 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc------chHHHHH--HHHHHHHHHHHHhcccCCCCCCC-------C
Confidence 4578999999999999999999988765532210 0111111 11112222222322222111110 1
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 184 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~ 184 (312)
..+ ..+.+++|+........+..++..+...+..|.-+.......+.+|.....++++++++....|++.||+
T Consensus 190 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 262 (381)
T PRK03633 190 STS-------IWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRF 262 (381)
T ss_pred CCC-------HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc
Confidence 111 2234566665554433333333222221211211111112234678888889999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHH
Q 021469 185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC 263 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs 263 (312)
++|+ .+..+..+......... + . .......+++|++.............+..|+++ ..+.+.+....+
T Consensus 263 ~~~~-~l~~~~~~~~~~~~~~~---~-~------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (381)
T PRK03633 263 GRLL-VLRVQVFVVILGSIAML---S-Q------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYT 331 (381)
T ss_pred CcHH-HHHHHHHHHHHHHHHHh---h-h------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 8765 43344444333332221 1 1 112345566777766666666666666665544 446677777788
Q ss_pred HHHHHHHHhhhhh
Q 021469 264 ASIAVVFFIGPYI 276 (312)
Q Consensus 264 ~g~ai~f~~~~~l 276 (312)
+|.+++-.+.+.+
T Consensus 332 lG~~igp~~~G~l 344 (381)
T PRK03633 332 VGSLLGPSFTAML 344 (381)
T ss_pred HHHHHHHHHHHHH
Confidence 8888887777754
No 33
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.03 E-value=7.4e-08 Score=92.51 Aligned_cols=237 Identities=9% Similarity=-0.069 Sum_probs=122.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHH-HHHhccCCcccc---c-----c
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKG---E-----K 95 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~-l~lfL~~~~~~~---~-----~ 95 (312)
+++||+..|+.....+.+.++|..+...+....+ .+..|.+..++.++..+ ...+++++++.. + +
T Consensus 142 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g------w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 215 (434)
T PRK11663 142 RTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG------WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH 215 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence 3679999999999999999999987766543211 34556555555444433 334555432211 0 0
Q ss_pred chhhc-ch--hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHH
Q 021469 96 ETADA-SV--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFD 170 (312)
Q Consensus 96 ~~~~~-~~--~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~ 170 (312)
+.++. ++ +++.+.++.++. +.++||+...+...++...+.+.......+. +..+..| ....+....+++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~l~~~~g~s~~~a~~~~~~~~~~~ 292 (434)
T PRK11663 216 DALELAQQQEGAGLSRKEILTK--YVLLNPYIWLLSFSYVLVYVVRAAINDWGNL-YMSETLGVDLVTANSAVSMFELGG 292 (434)
T ss_pred cccccchhccccCCChhhhHHH--HHhcChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHH
Confidence 10000 00 011122222221 2577888766554333322222211111111 1112223 235677778889999
Q ss_pred HHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469 171 AICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 248 (312)
Q Consensus 171 ~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~ 248 (312)
+++.++.|++.||+ ++|++......+.......... ..+.+ + ..+.....+.+|+.....++...+...+.+|
T Consensus 293 ~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 367 (434)
T PRK11663 293 FIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLW-LMPFA-S---YVMQAACFFTIGFFVFGPQMLIGMAAAECSH 367 (434)
T ss_pred HHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHH-Hcccc-c---HHHHHHHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999997 3333221111111111111111 12211 1 1223344455666544444445566677775
Q ss_pred C-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 249 H-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 249 ~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
+ +...+.++.+....+|.+++-...+.
T Consensus 368 ~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 368 KEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred HhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 4 44678899999988888887555444
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.03 E-value=1.6e-07 Score=88.60 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=115.8
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
+++++++..|+++.....+..+|..+...+.... ..+..|.+..++..+..+.. ..+|+++++++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~------- 187 (382)
T PRK10091 121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------SWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG------- 187 (382)
T ss_pred ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------cHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc-------
Confidence 3457889999999888899988887765553321 13455655555544444332 345443221110
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHh--hhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAY--SGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAG 178 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~--~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G 178 (312)
.. ++.++.++|++...+...... .+.. . +.+..+. +.....| .+..++.....+++.+++.++.|
T Consensus 188 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 256 (382)
T PRK10091 188 ----GL----REQFHFLRSPAPWLIFAATMFGNAGVF-A-WFSYIKP-YMMFISGFSETSMTFIMMLVGLGMVLGNLLSG 256 (382)
T ss_pred ----CH----HHHHHHhcChHHHHHHHHHHHHHHHHH-H-HHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHh
Confidence 01 122355677776544332221 1111 1 1111111 1111122 34678888899999999999999
Q ss_pred hhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHH
Q 021469 179 RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQL 258 (312)
Q Consensus 179 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~ 258 (312)
++.||+++|+ +...+..+....+.+.. ..+++ ++...++.++++++.....+..........++++....+..
T Consensus 257 ~l~~r~~~~~-~~~~~~~~~~i~~~~~~-~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (382)
T PRK10091 257 RLSGRYSPLR-IAAVTDFIIVLALLMLF-FFGGM-----KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG 329 (382)
T ss_pred eeccccCchh-HHHHHHHHHHHHHHHHH-HHHhh-----HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH
Confidence 9999998665 33344444333333221 12221 12344455556665544444333333333333333344445
Q ss_pred HHHHHHHHHHHHHhhhh
Q 021469 259 KVWQCASIAVVFFIGPY 275 (312)
Q Consensus 259 ~~~qs~g~ai~f~~~~~ 275 (312)
+....+|.+++-.+.+.
T Consensus 330 ~~~~~~g~~~Gp~~~G~ 346 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGM 346 (382)
T ss_pred HHHHHHHHHHHHHHhHH
Confidence 66667777777776664
No 35
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.03 E-value=5.3e-08 Score=90.66 Aligned_cols=238 Identities=11% Similarity=0.027 Sum_probs=121.6
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc--CCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcc
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADAS 101 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~--~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~ 101 (312)
++++|++..++.......+.++|+++...+.....+. ..-..+..|.+..++..++..+...++++++.++++++ +
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 203 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK--H 203 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc--c
Confidence 3568999999999988999999988776553211110 01112344544444444443333333332221111101 0
Q ss_pred hhhhhHHHHHHHHHHHhhcChh--hHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHH
Q 021469 102 VNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAA 177 (312)
Q Consensus 102 ~~~~~s~~~~~~~~~~~~~~~~--~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~ 177 (312)
++.+.+. .+.+++++ .+...-..+..+..........+ .+..+..| ....+.++...++.+.++..+.
T Consensus 204 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 275 (394)
T TIGR00883 204 KKKRGPI-------RETLTKHRKPFLLGLGLVIATTTTFYLITTYLP-TYLTQTLGLSANSALLVLMLSLILFFITIPLS 275 (394)
T ss_pred ccccCCH-------HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 0111122 22333443 33322222222221111111111 11111122 3457778888899999999999
Q ss_pred hhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHH
Q 021469 178 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFA 256 (312)
Q Consensus 178 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa 256 (312)
|++.||++||+.+...+.+.....+........++ + .+......++.|++.+..+....+.+.+.+|++. ..+++
T Consensus 276 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 351 (394)
T TIGR00883 276 GALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSG-S---FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGAS 351 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCC-c---hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEee
Confidence 99999998776443333322222212111111111 1 2344556677888888888888999999998654 45666
Q ss_pred H-HHHHHHHHHHHHHHhhhh
Q 021469 257 Q-LKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 257 ~-~~~~qs~g~ai~f~~~~~ 275 (312)
+ +.....+|..++-.+.+.
T Consensus 352 ~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 352 LAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred ehhHhHHHHHhhHHHHHHHH
Confidence 5 344455566555555444
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=99.02 E-value=2.7e-08 Score=92.90 Aligned_cols=110 Identities=14% Similarity=0.023 Sum_probs=78.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+......+++.+++..+.|++.||+++| .......+..+..+.+.. .. ++ ++...+..+++|++.+..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~~~g~~~~~~~ 356 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALLLLLGAVFAVLVGS-TL-FS-----PTLLLLLGAIAGFFVNGGQ 356 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHH-Hh-hC-----HHHHHHHHHHHHHHHHHHH
Confidence 4567888889999999999999999999866 343333333222222211 11 11 2345677788999999888
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.....++.+.+|++. ..++++......+|.+++-.+.+
T Consensus 357 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 357 SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999987644 57899999988888888766554
No 37
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.02 E-value=1.2e-07 Score=91.50 Aligned_cols=266 Identities=9% Similarity=-0.037 Sum_probs=124.0
Q ss_pred cCceeechhhHHHHHHHHhHh-hhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccc----cc--
Q 021469 24 EGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG----EK-- 95 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~i-iG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~----~~-- 95 (312)
+++.|++..|++....+.+.. .|.++........ ..+..|.+..++.++..++ .+++|+++++. ++
T Consensus 150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~------gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (452)
T PRK11273 150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN------DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEY 223 (452)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc------cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhh
Confidence 346789999998777776653 3333322222111 1244555555555554333 45565432210 00
Q ss_pred --chhhc---chhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccc--cccchhhHHHHHHh
Q 021469 96 --ETADA---SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPA--LGVSGVGGAMAVYG 167 (312)
Q Consensus 96 --~~~~~---~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~--lg~~~~g~v~~~~g 167 (312)
|..+. +.+++.+.++.+. ..+++||+.+.+.-..+. .....++ ...+|. +..+. ++....+.....++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~P~-~l~~~~g~s~~~~~~~~~~~~ 299 (452)
T PRK11273 224 KNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGI-LDWSPT-YLKEVKHFALDKSSWAYFLYE 299 (452)
T ss_pred hhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHhcCCCHHHHHHHHHHHH
Confidence 00000 0011112233221 135678876544333222 2221111 111222 21221 22345677777888
Q ss_pred HHHHHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 168 AFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 168 ~~~~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
++.+++.++.|++.||+ +||.........+..............+ ++...+..+..|+.-.......++...+
T Consensus 300 ~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 374 (452)
T PRK11273 300 YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGN-----PTVDMACMIVIGFLIYGPVMLIGLHALE 374 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccC-----hHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999998 3333222222222112211111111111 1122233344444322222334455567
Q ss_pred hccCC-hhhhHHHHHHHHHHHHHH-HHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 246 LFKHD-TEGAFAQLKVWQCASIAV-VFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVE 304 (312)
Q Consensus 246 ~~~~~-~~~afa~~~~~qs~g~ai-~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~~~~ 304 (312)
.+|++ ...++++.+....+|.++ +-.+.+.+ .....+.+..+.++++.+...++.+.++
T Consensus 375 ~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 375 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 77754 467899998888777654 44444433 2233444555666666665554443333
No 38
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.01 E-value=6.9e-08 Score=91.94 Aligned_cols=114 Identities=9% Similarity=-0.043 Sum_probs=70.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+..+...+++++++..+.|++.||++||+ .+..+.++......... ..+.+ + ..+..++.+.+++......
T Consensus 266 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~ 339 (426)
T PRK12307 266 GVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK-TFSIGLLMSFLFIFPLF-RIPQD-N---YLLLGACLFGLMATNVGVG 339 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH-HHccc-c---HHHHHHHHHHHHHhcccHh
Confidence 45677788899999999999999999998765 44455444433322221 11211 1 1111122222333333334
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
...+.++.+.+|++. ..+.++......+|..++-.+.+.+
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 455667788888654 6788888888888888877766654
No 39
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.00 E-value=3.2e-08 Score=90.47 Aligned_cols=224 Identities=16% Similarity=0.142 Sum_probs=142.6
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~ 103 (312)
++++|++..++.....+.+..+|..+...+....+ .+..|.+..++.+++.+...+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------------- 174 (352)
T cd06174 117 PPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG------WRWLFLILAILGLLLALLLLFLL---------------- 174 (352)
T ss_pred CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 34789999999999999999999998877754321 24566666666666666655553
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc--ccccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~--~lg~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
|++..+....+.............+ .+..+ -....+.+......++++.++..+.|++.
T Consensus 175 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 235 (352)
T cd06174 175 ------------------RLLLLLALAFFLLSFGYYGLLTYLP-LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLS 235 (352)
T ss_pred ------------------HHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111111111111111111111 11111 11235678888899999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKV 260 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~ 260 (312)
||+++|+..+..+..+...+..+.. .. ++ .+..++..++.|++.+..++.....+.+..|+ ++.+++++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~~-~~-~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (352)
T cd06174 236 DRLGRRRLLLLIGLLLAALGLLLLA-LA-PS-----LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNT 308 (352)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHH-Hh-cc-----HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHH
Confidence 9988664144455555544443322 11 11 24577889999999999999999999999884 45689999999
Q ss_pred HHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHH
Q 021469 261 WQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVG 295 (312)
Q Consensus 261 ~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~ 295 (312)
.+++|..++-.+.+.+. ...-..+..++.+++.+.
T Consensus 309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 99999999988877642 223334444444444443
No 40
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=1.5e-07 Score=100.61 Aligned_cols=238 Identities=18% Similarity=0.156 Sum_probs=133.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC----CcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK----GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADA 100 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~----~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~ 100 (312)
++++++..|+.....+.+.++|.++...+..... +........++.+...+.+++.++.+++|+.+...+...++
T Consensus 134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (1146)
T PRK08633 134 KENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDK- 212 (1146)
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccc-
Confidence 4689999999999999999999988876653200 00001112233333333444444445555432221111000
Q ss_pred chhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cc-hhhHHHHHHhHHHHHHHHH
Q 021469 101 SVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VS-GVGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 101 ~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~-~~g~v~~~~g~~~~ig~~~ 176 (312)
.+.... ++.++.++ ++++|..+.++.......+........++..+ ...+| .. ..|+++.+.+++.++++++
T Consensus 213 --~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~~g~~~~~~~ig~~~g~~~ 288 (1146)
T PRK08633 213 --KKYLFP-KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA-KEVLGLDNTFQVQYLLAASAIGIGIGSLL 288 (1146)
T ss_pred --cccccH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 011111 22223333 46666655444332222222212222222111 12123 23 5688888999999999999
Q ss_pred HhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469 177 AGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAF 255 (312)
Q Consensus 177 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~af 255 (312)
.|++.||++++. ++.++.++...+.++. .+.++ .+...+..+++|++.+......++++....|++ +..++
T Consensus 289 ~g~l~~r~~~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~ 360 (1146)
T PRK08633 289 AGRLSGRHIELG-LVPLGALGLALSLFLL--PTAPS-----LASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVL 360 (1146)
T ss_pred HHHHhCCceEcc-chhHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhh
Confidence 999999987554 3334443333332222 12121 234667788899999988888888888887654 46789
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 021469 256 AQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~~ 275 (312)
++..+++++|..++..+...
T Consensus 361 ~~~~~~~~lg~~~~~~~~~~ 380 (1146)
T PRK08633 361 AANNFLQNVGMLLFLALTTL 380 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999988766655543
No 41
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.98 E-value=2.9e-07 Score=86.94 Aligned_cols=229 Identities=10% Similarity=0.043 Sum_probs=124.1
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 105 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~ 105 (312)
++++...++...-...|.++|+.....+....+ .+..|.+..++..+..+..+++++++++++++ + +
T Consensus 129 ~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g------w~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~------~ 195 (390)
T TIGR02718 129 RTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG------QRPAFLLVACVPLASLVCVLWLKDRAVASPEA-P------L 195 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-c------h
Confidence 344555565666666677777755544443211 24567777777766666665665433221110 0 0
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHHH-HHHHHHHhhhhcC
Q 021469 106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFD-AICSLAAGRLTTG 183 (312)
Q Consensus 106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~~-~ig~~~~G~l~d~ 183 (312)
++.++..+.+|+|+.+.+....+......+...+..+ .+..+ -.+.+++|.+....++.+ +++.++.|++.||
T Consensus 196 ----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 196 ----ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSK-LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred ----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhh-HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 1123345678888876555544433332222222211 12122 123457888887777644 5668899999999
Q ss_pred CCChhhHHHHHHHHH-HHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHHHH
Q 021469 184 LPSITFIVSGGAIAQ-VVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQLK 259 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~~~ 259 (312)
+++|+.+ .++.++. .....+... .....+ .+...+....+.+++.+......+....+..++ .....++..+
T Consensus 271 ~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 346 (390)
T TIGR02718 271 AGLWRTF-ILGVGLAGSLALLWFAQAAFWLAP---GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQ 346 (390)
T ss_pred hhHHHHH-HHHHHHHHHHHHHHHHHHHcccCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 9876533 3344333 212111111 110110 112233344455566666666666666666543 3467899999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
..+++|..++-.+++.+
T Consensus 347 ~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 347 STRDLGELIASSIAGYL 363 (390)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887765
No 42
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.97 E-value=7.2e-08 Score=90.46 Aligned_cols=115 Identities=11% Similarity=-0.010 Sum_probs=76.5
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
....+.+...++++++++..+.|++.||++||+ .+.++.+.......... ...++ .+...+..++.|++.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~ 345 (405)
T TIGR00891 273 PHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK-AYVCSLLAGQLLIIPVF-AIGAN-----VAVLGLGLFFQQMLVQGI 345 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh-hhHHHHHHHHHHHHHHH-HhCCc-----hHHHHHHHHHHHHHHccc
Confidence 346788888899999999999999999998765 33344433322111111 12111 122333445566666555
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 277 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~ 277 (312)
.......+.+.+|++ +.+++++.+...++|..++-.+.+.+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 666777888888754 467899999999999998888777653
No 43
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.96 E-value=2.8e-08 Score=94.79 Aligned_cols=119 Identities=11% Similarity=0.054 Sum_probs=70.3
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCC---CCchHHHHHHHHHHhhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGV---LGTLYPLIMAALLGIGD 232 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~G~~d 232 (312)
...+......+++.+++.++.|++.||++||+.+ ..+.++...++.+.. ..+....+. ..........++.+...
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (481)
T TIGR00879 319 DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL-LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFA 397 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHH
Confidence 3456777788889999999999999999877533 344444443333222 112111110 01111222223333333
Q ss_pred hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..+....+.++.+.+|++ +..+.++......+|..++-.+.+.+
T Consensus 398 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 398 MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566668888754 46789999999999888877766643
No 44
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.95 E-value=4.6e-07 Score=86.52 Aligned_cols=235 Identities=14% Similarity=0.071 Sum_probs=126.3
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcC-CCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-DKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~-~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
+++|++..++-......+.++++++...+... .+..+....+..+.+..++..+..++. .++++++++++++ +
T Consensus 131 ~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-~---- 205 (437)
T TIGR00792 131 PRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-I---- 205 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-c----
Confidence 35678888876666666666665554333221 111011122344555555544444433 2333322111111 0
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc-cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg-~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
+++.+.++.+| +++++|+.+.+.-..+...+......+. ..-+.+..++ ....+.......++.++++.+.+++.
T Consensus 206 ~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~ 281 (437)
T TIGR00792 206 EKKLSLKQIFK---ALFKNDQLLILCLAYLFYNLAFNIKNGV-QVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLV 281 (437)
T ss_pred ccCCCHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHcch-hheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11123344333 3467887755544333332222222111 1111111223 23455666677889999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------C-Chhh
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------H-DTEG 253 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~-~~~~ 253 (312)
||+++|+ ++..+.++....+.... +.++ +.+...+..++.|++.+..+...++++++..+ + ....
T Consensus 282 ~r~g~~~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 354 (437)
T TIGR00792 282 KKFGRKI-LFAGGILLMVLGYLIFF--FAGS----NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGL 354 (437)
T ss_pred HHhCcHH-HHHHHHHHHHHHHHHHH--Hcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHH
Confidence 9998765 44556555544443322 2222 12345566778888888888888888877643 1 2246
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh
Q 021469 254 AFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 254 afa~~~~~qs~g~ai~f~~~~~ 275 (312)
+++++++.+.+|.+++-.+.+.
T Consensus 355 ~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 355 VYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999888776654
No 45
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.95 E-value=2e-07 Score=88.41 Aligned_cols=223 Identities=10% Similarity=-0.040 Sum_probs=114.5
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 105 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~ 105 (312)
++|++..|++......+..+|+.+...+..... ..+..+.++.+..++..+..++.++.+++++++ ++
T Consensus 128 ~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~-----~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 195 (393)
T PRK09705 128 QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE-----TWYQTLAWWALPAVVALFAWWWQSAREVASSHK-------TT 195 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC-------CC
Confidence 568999999998888899999988765543211 123334344343333333333332211111100 00
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469 106 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 185 (312)
Q Consensus 106 ~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~ 185 (312)
. +..+.+++++.+.+...+....+.........+.-+....+.....|+....++++.++|.++.|++.||++
T Consensus 196 ~-------~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~ 268 (393)
T PRK09705 196 T-------TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQD 268 (393)
T ss_pred c-------CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 0 012345666654443333222221111111111111111122345788889999999999999999999998
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHHHHHHHH
Q 021469 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQLKVWQC 263 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~~~~~qs 263 (312)
+|+ .+..+..+......... ..+++. .. +..++.|++-+...........+.+++ +...+++..+....
T Consensus 269 ~~~-~~~~~~~l~~~~~~~~~-~~~~~~-----~~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 339 (393)
T PRK09705 269 RRK-LLMLALVLQLVGFCGFI-WLPLQL-----PV--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF 339 (393)
T ss_pred chH-HHHHHHHHHHHHHHHHH-HccchH-----HH--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 765 33444444433333221 123221 11 122345665555555555455555543 23457888887777
Q ss_pred HHHHHHHHhhhhh
Q 021469 264 ASIAVVFFIGPYI 276 (312)
Q Consensus 264 ~g~ai~f~~~~~l 276 (312)
++..++-.+.+.+
T Consensus 340 ~~~~~gp~~~G~l 352 (393)
T PRK09705 340 IIAGLAPWFSGVL 352 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666555544
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.95 E-value=3.6e-07 Score=86.14 Aligned_cols=224 Identities=11% Similarity=0.021 Sum_probs=114.4
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++|++..|+.......+.++|.++...+....+ .+..|.+..++.++..++. .++|++++++ ++ +
T Consensus 121 ~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~---- 188 (392)
T PRK10473 121 DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP------WQSLFYTMAAMGILVLLLSLFILKETRPAR-AP-A---- 188 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC------hHHHHHHHHHHHHHHHHHHHHHcCCCCCcc-cC-C----
Confidence 34678999999999988888888888766543211 2455666666666665554 3444332211 11 0
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
+.+ ..++..+.++|++.+....... .......+. ...+. +.....| ....++.+...+++.+++..+.|+
T Consensus 189 --~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 261 (392)
T PRK10473 189 --ASS---KPRENSESLLNRFFLSRLVITTLSVTVILTFV-NTSPV-LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPF 261 (392)
T ss_pred --ccc---hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-HhCHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001 1123345567777644332221 111111111 11111 1111123 345788888999999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC--ChhhhHHH
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH--DTEGAFAQ 257 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~~~~afa~ 257 (312)
+.||+++|+ .+.++.++......... .. +..+ ........+..|++.+.-.. ......|+ +...+.++
T Consensus 262 l~~r~g~~~-~~~~~~~~~~~~~~~~~-~~-~~~~---~~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~g~~~~~ 331 (392)
T PRK10473 262 ALGIFKPRT-LMLTSQVLFLAAGITLA-LS-PSHA---VSLFGITLICAGFSVGFGVA----MSQALGPFSLRAGVASST 331 (392)
T ss_pred HHHhcCHHH-HHHHHHHHHHHHHHHHH-HH-HHHH---HHHHHHHHHHHHHHHHhHHH----HHHHhccCcccccHHHHH
Confidence 999998765 44455444433333222 11 1100 01122222233333322111 11223332 22456677
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 021469 258 LKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 258 ~~~~qs~g~ai~f~~~~~l 276 (312)
..+.|.+|.+++-.+...+
T Consensus 332 ~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 332 LGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7777777777775555443
No 47
>PRK12382 putative transporter; Provisional
Probab=98.93 E-value=4.9e-07 Score=85.29 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=80.2
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+..++.+..++++.+++..+.|++.||+++|+ .+..+..+....+.+.. ..++ .+...+..+++|++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 248 WAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-VAIVSLLVETVGLLLLW--LAPT-----AWVALAGAALTGAGCSLI 319 (392)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-ehHHHHHHHHHHHHHHH--Hccc-----HHHHHHHHHHHHHHHHhH
Confidence 344566677788889999999999999998765 33445444444443322 2222 234566778889998887
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.......+.+.+++ ++.++++++.....+|.+++-.+.+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 361 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGML 361 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788888864 446899999999999998888777654
No 48
>TIGR00898 2A0119 cation transport protein.
Probab=98.93 E-value=2.5e-07 Score=90.30 Aligned_cols=232 Identities=13% Similarity=-0.016 Sum_probs=126.6
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----cccchhh-
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKETAD- 99 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~~~~~- 99 (312)
++.|++..++.......|.+++.+++..+.. .+..|.+..+..++..+...++|+..+. .+.++..
T Consensus 211 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~ 281 (505)
T TIGR00898 211 KKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---------WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALK 281 (505)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHH
Confidence 3578899999888888888888887765421 3456666666666666666667653221 1111000
Q ss_pred ------------cchhh-hhHHHHH---H---HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhh
Q 021469 100 ------------ASVNF-YSYLVSL---S---KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVG 160 (312)
Q Consensus 100 ------------~~~~~-~~s~~~~---~---~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g 160 (312)
.+.+. .....++ - ....+++++|+++......+..-+..++... .-.+....++.+ ..
T Consensus 282 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~ 358 (505)
T TIGR00898 282 ILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYY--GLVLDLGNLGGN-IY 358 (505)
T ss_pred HHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHH--HHhccccccCCC-hH
Confidence 00000 0000000 0 1234567788875554443332222211110 000111112221 22
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 240 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~ 240 (312)
......++.++++.++.+.+.||++||. .+.++.++...+.+... .. ++.+ .+...+..++.+++-+......+
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~-~~~~~~~~~~~~~l~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 432 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRY-TMAASLLLAGVALLLLL-FV-PVDL---YFLRTALAVLGKFGITSAFQMVY 432 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHH-Hc-CCCc---hHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344678889999999999999998775 43444444333332221 22 2211 12344455566666666667788
Q ss_pred hHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 241 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 241 ~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.+..+.+|.+ +..+.++......+|..++-.+..
T Consensus 433 ~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 433 LYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 8888889864 456888888888888877765554
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.93 E-value=1.4e-07 Score=91.19 Aligned_cols=240 Identities=11% Similarity=0.045 Sum_probs=133.7
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCcccc--ccchh---
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG--EKETA--- 98 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~--~~~~~--- 98 (312)
+++|++..|++......+..+|..+...+....+ .+..|.+...+.++..++.. ++|++++++ +.|..
T Consensus 121 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~ 194 (485)
T TIGR00711 121 PEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH------WRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLL 194 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC------ceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHH
Confidence 4688999999999999999999988766543211 23445555555555544443 344322211 11100
Q ss_pred --------------hcchhhhhHH------------------HHHHH-----HHHHhhcChhhHHHHHHHHhhhhHhhhh
Q 021469 99 --------------DASVNFYSYL------------------VSLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFV 141 (312)
Q Consensus 99 --------------~~~~~~~~s~------------------~~~~~-----~~~~~~~~~~~lll~p~~~~~G~~~~f~ 141 (312)
+.+...+.+. .+|.+ ...+++++|+.....-..+..++...-.
T Consensus 195 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (485)
T TIGR00711 195 LLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGS 274 (485)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 0000000000 00100 0135677777654433332222211100
Q ss_pred hhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCch
Q 021469 142 WAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL 219 (312)
Q Consensus 142 ~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (312)
.. +...+..+..| ..+.|+.+...+++.++++.+.|++.||+++|+ .+.++..+......+......++.+ .+
T Consensus 275 ~~-~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~ 349 (485)
T TIGR00711 275 FY-LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK-LVTIGLILYAVGFYWRAFTFTPDTP---FL 349 (485)
T ss_pred HH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH-HHHHHHHHHHHHHHHHhccCCCCCC---HH
Confidence 01 11111122223 346788888999999999999999999998765 4455555544443332212222221 22
Q ss_pred HHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 220 YPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 220 ~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
......++.|++.+..............|+ +...+.++++..+.+|.+++-.+.+.
T Consensus 350 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 350 AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557788888888776666666566664 44678999999999999998877664
No 50
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.92 E-value=1.4e-07 Score=91.36 Aligned_cols=238 Identities=11% Similarity=0.007 Sum_probs=133.5
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Ccc-----ccccch--
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EED-----KGEKET-- 97 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~-----~~~~~~-- 97 (312)
++|++..|+.......+..+|+.+.-.+....+ .+..|.+..++.++..+...++.+ ++. ++++++
T Consensus 139 ~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g------wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 212 (455)
T TIGR00892 139 RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG------WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLP 212 (455)
T ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC------hHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCC
Confidence 568999999988888888888776654443211 345666666666665554444432 211 000010
Q ss_pred hhcchhh--hhHHHHHHHHH--HHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHH
Q 021469 98 ADASVNF--YSYLVSLSKSI--TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIC 173 (312)
Q Consensus 98 ~~~~~~~--~~s~~~~~~~~--~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig 173 (312)
.+.+.++ .....++.++. ++++++|+.+.+.-..+..++.........+.-......+..+.+.++.+.+++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~ 292 (455)
T TIGR00892 213 PDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFA 292 (455)
T ss_pred CCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000 01112222222 3678888876555433322221100001111111111123456788888999999999
Q ss_pred HHHHhhhhcCC--CChhh-HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469 174 SLAAGRLTTGL--PSITF-IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 250 (312)
Q Consensus 174 ~~~~G~l~d~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~ 250 (312)
..+.|++.||. ++|+. ++..+.++...++++. ...++ ++...+..+++|++.+..+...++++.+.+|++
T Consensus 293 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~~-----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~ 365 (455)
T TIGR00892 293 RPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC--ALAGD-----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ 365 (455)
T ss_pred HHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH--HHhch-----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH
Confidence 99999999973 32322 2222222222222221 12122 234566788999999888888899999888754
Q ss_pred h-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 251 T-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 251 ~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
. ..+++++...+++|..++-.+...+
T Consensus 366 ~~g~~~g~~~~~~~lg~~igp~i~G~l 392 (455)
T TIGR00892 366 RFSSAVGLVTIVECCAVLIGPPLAGRL 392 (455)
T ss_pred HHhhHHhHHHHHHHHHHHccccceeee
Confidence 3 6789999999999998888776643
No 51
>PRK09952 shikimate transporter; Provisional
Probab=98.91 E-value=3.9e-07 Score=87.71 Aligned_cols=108 Identities=10% Similarity=0.060 Sum_probs=60.3
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhH
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 240 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~ 240 (312)
.+..+.++...++..+.|++.||++||+ .+..+.++...+....+......++ .....+..++.|++.+......+
T Consensus 290 ~~~~~~g~~~~i~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~ 365 (438)
T PRK09952 290 NIGLLVGGLSCLTIPCFAWLADRFGRRR-VYITGALIGTLSAFPFFMALEAQSI---FWIVFFSIMLANIAHDMVVCVQQ 365 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567778888899999999998775 3334444333222211111111110 12233445666788777777788
Q ss_pred hHHHHhccCCh-hhhHHH-HHHHHHHHHHHHHHh
Q 021469 241 ALLGILFKHDT-EGAFAQ-LKVWQCASIAVVFFI 272 (312)
Q Consensus 241 ~i~g~~~~~~~-~~afa~-~~~~qs~g~ai~f~~ 272 (312)
.++.+.+|.+. ..+.+. ++....+|.+++=.+
T Consensus 366 ~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i 399 (438)
T PRK09952 366 PMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI 399 (438)
T ss_pred HHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence 88999998644 234444 333333454444333
No 52
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.91 E-value=7.7e-07 Score=83.98 Aligned_cols=229 Identities=14% Similarity=0.055 Sum_probs=118.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~~~~~~~~~~ 103 (312)
++++++..++.......+..+|..+...+.... ..+..|.+..++..+..++ ..++|++++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 192 (394)
T PRK11652 127 GTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------GWRACYLFLLLLGAGVTFSMARWMPETRPADAR-------- 192 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------ChHHHHHHHHHHHHHHHHHHHHhCCccCccccc--------
Confidence 356778888777777777777777665543321 1244555544444433333 3344432221111
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
+.+.++. ..+.++||+.+......+.............+. +..+..|. ...|+......++..+++.+.+++.
T Consensus 193 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 267 (394)
T PRK11652 193 -RTRVLAS---YRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGV-LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN 267 (394)
T ss_pred -hhHHHHH---HHHHHcChHHHHHHHHHHHHHHHHHHHHHhChH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222 223456776543222211111111111111111 11122232 3567777778888888999999998
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHH
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW 261 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~ 261 (312)
||.+++..............+ + ...+.... +.+......+++|++-+..+....+...+.+|++...+.++....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (394)
T PRK11652 268 KRFSTLMWQSVICCLLAGLLM-W-IPGWFGVM---NVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGL 342 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-H-HHHHhccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 877522211111111111111 1 11111111 123355567788888888788888777777787777788999999
Q ss_pred HHHHHHHHHHhhhhhh
Q 021469 262 QCASIAVVFFIGPYIS 277 (312)
Q Consensus 262 qs~g~ai~f~~~~~l~ 277 (312)
+.+|.+++-.+...+.
T Consensus 343 ~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 343 QNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999988887776653
No 53
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.91 E-value=1.2e-06 Score=85.71 Aligned_cols=252 Identities=15% Similarity=0.086 Sum_probs=125.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
+++|++..++......++.++|+.+...+.... ...+..|.+..++..+..+..+++|+|++.++++ + +.
T Consensus 138 ~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-----~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~-~----~~ 207 (491)
T PRK11010 138 AEERGAGAAISVLGYRLAMLVSGGLALWLADRY-----LGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVP-K----TL 207 (491)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-c----ch
Confidence 467999999999999999999988876665411 1245667777666666655555666553221111 0 00
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHH-hHHHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVY-GAFDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~-g~~~~ig~~~~G~l~ 181 (312)
++...+.+++ .+++++..++....+...+...+.....+.-+ .+..| .+.+|++.... .++.++|+++.|++.
T Consensus 208 ~~~~~~~l~~---~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l-~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~ 283 (491)
T PRK11010 208 EQAVVAPLRD---FFGRNNAWLILLLIVLYKLGDAFAMSLTTTFL-IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILM 283 (491)
T ss_pred hhhHHHHHHH---HHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112223333 44555543332222222222222211111111 11123 35677776444 468999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCCCchHHHHHHHH----HHhhhhHHhhhhHhHHHHhccCC-hhhhH
Q 021469 182 TGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAAL----LGIGDGVLNTQLSALLGILFKHD-TEGAF 255 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l----~G~~d~~~~t~~~~i~g~~~~~~-~~~af 255 (312)
||+++|+.++ ++.++..... .+..+...++ + .+......++ .|++.+.. ..+...+.+++ ....+
T Consensus 284 dr~g~~~~l~-i~~~l~~l~~l~~~~l~~~~~-~---~~~l~~~~~l~~~~~g~~~~~~----~a~~~~l~~~~~~~t~~ 354 (491)
T PRK11010 284 QRLSLFRALM-IFGILQGVSNAGYWLLSITDK-N---LYSMGAAVFFENLCGGMGTAAF----VALLMTLCNKSFSATQF 354 (491)
T ss_pred HHHhHHHHHH-HHHHHHHHHHHHHHHHHhccc-c---HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHcCCCCcHHHH
Confidence 9998765443 3333322221 1111111111 1 1112222333 45445443 44444555433 35678
Q ss_pred HHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469 256 AQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~ 299 (312)
++.+...++|..++-.+.+.+ ....-+.+..++.+.+++.....
T Consensus 355 gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 355 ALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888877655555543 11122333334445554444443
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.91 E-value=9.9e-07 Score=84.29 Aligned_cols=231 Identities=14% Similarity=0.077 Sum_probs=126.0
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
++++++|..+++....+.+.++|.++...+.... ..+..|.+..++.+++.+.. .++|+++++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~------ 201 (413)
T PRK15403 134 GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------HWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP------ 201 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCC------
Confidence 3467889999999999999999988886665321 13556777777777666543 3455432211110
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH-hhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~-~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
.+.++..++..++++||++......+...... .++. ...|. +..+..| ....++.....+.+..+++.+.++
T Consensus 202 ---~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~-~~~P~-~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~ 276 (413)
T PRK15403 202 ---FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWV-AVSPV-ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVAR 276 (413)
T ss_pred ---CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HhChH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122334455678999987655543332222 2221 22222 2122223 345677777777788888888888
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhc--ccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHH
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQ 257 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~ 257 (312)
+.++..+++.. ..+..+...+..+.... ..++. +...++..++.++|.+.......+..-.-.+++..++.++
T Consensus 277 ~~~~~~~~~~~-~~~~~~~~ig~~l~~~~~~~~~~~----~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~ 351 (413)
T PRK15403 277 FVKDPTEPRFI-WRAVPIQLVGLALLIVGNLLWPHV----WLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSAS 351 (413)
T ss_pred HhccCCchhHH-HHHHHHHHHHHHHHHHHHHHcccc----HHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHH
Confidence 77544332222 11111111121111111 11221 1224556666777776665555532211123345678899
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 021469 258 LKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 258 ~~~~qs~g~ai~f~~~~~l 276 (312)
+++.+..+..++-....++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 352 LNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988888877776654
No 55
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.88 E-value=1.7e-07 Score=89.75 Aligned_cols=234 Identities=16% Similarity=0.096 Sum_probs=133.6
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCC-CCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST-SGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~-~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++|.+..+.=......+.++.+.+...+....++.+. +....+..++.++.++..++..+.-+.++++.++ +++
T Consensus 136 ~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~-----~~~ 210 (428)
T PF13347_consen 136 DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTE-----QEK 210 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccc-----ccc
Confidence 5677777765555555554444443333322121111 1223445555555555554443332221111111 122
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc-chhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTG 183 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~-~~~g~v~~~~g~~~~ig~~~~G~l~d~ 183 (312)
+.++++.++ .+++||+++.+.-..+...+......+..+ -+....+|. +..+..+....+..+++..+.+++.||
T Consensus 211 ~~~~~~~~~---~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~-y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r 286 (428)
T PF13347_consen 211 KISLRDSLR---SLFRNRPFRILLLAFFLQWLAFALMNTFLP-YYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKR 286 (428)
T ss_pred ccccccchh---hhcccchHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445443 345678777666666665555444433211 011222232 245566667888899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC--------hhhhH
Q 021469 184 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD--------TEGAF 255 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~--------~~~af 255 (312)
+++|+ .+..+.++.....++... .+++ ++++.++..++.|++-+..+...++++++.-+++ +...+
T Consensus 287 ~gk~~-~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 287 FGKKK-VYIIGLLLAALGFLLLFF-LGPG----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred cccee-ehhhhHHHHHHHHHHHHH-HHhh----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 98765 555666666555554332 2211 1356889999999999999999999999876522 23568
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 021469 256 AQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~ 274 (312)
+++.+.+-+|.+++-.+..
T Consensus 361 s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HhhhhhhHHHHHHHHHHHH
Confidence 8888888888888776554
No 56
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=6.9e-07 Score=95.79 Aligned_cols=238 Identities=17% Similarity=0.115 Sum_probs=139.4
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++++++.+|+..+..+++.++|.++...+..... .+..|.....+.+++.++..+++++...++.. + .
T Consensus 139 ~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---- 206 (1140)
T PRK06814 139 KDELLGANALVEAGTFIAILLGTIIGGLATISGN------FVILVALLMGIAVLGWLASLFIPKTGNAAPDL-K-I---- 206 (1140)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc------cHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC-e-e----
Confidence 4689999999999999999999999887765321 23445333444444455555665543221111 0 0
Q ss_pred hhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
..+..++..+.++ +.+++.++.++..+....+..+...+..+. +....+| ....|+++..++++.++|+++.|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~ 285 (1140)
T PRK06814 207 DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPL-LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLS 285 (1140)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111222333344 466777766655444433332222222221 1122223 34678899999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhc----ccCCCCC---------CCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469 182 TGLPSITFIVSGGAIAQVVVFLWILIN----YSVTSGV---------LGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 248 (312)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~ 248 (312)
|+..+++.+ ..+.++..+..+.+... ..+.... ...+...+..+++|++.+..+...++++....|
T Consensus 286 ~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 364 (1140)
T PRK06814 286 EGRITLLYV-PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWAN 364 (1140)
T ss_pred CCceeeeee-hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCC
Confidence 765433322 22222222111111111 0000000 012445677888999999999999999999887
Q ss_pred CCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 249 HDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 249 ~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
++. .+++++.++...+|.+++-.+...+
T Consensus 365 ~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 365 PAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred cccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 644 6899999999999888877765543
No 57
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.86 E-value=5.6e-07 Score=85.10 Aligned_cols=230 Identities=10% Similarity=0.047 Sum_probs=125.0
Q ss_pred echhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHH
Q 021469 29 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYL 108 (312)
Q Consensus 29 g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~ 108 (312)
++..|..-...+.+.++|..+...+... + .+..|.+..++..+..++.++.++++++++++.++.+.++ .
T Consensus 132 ~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 201 (396)
T TIGR00882 132 NFEYGKARMFGCVGWALCASIAGILFSI-D------PQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANA---S 201 (396)
T ss_pred ccccchhhhhcccHHHHHHHHHhhhhcc-C------chHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhccccccc---C
Confidence 4566666667788888888886554321 1 2345555555555555444443322222111111000000 0
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHhhhhHhh---hhhhccccccc-ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469 109 VSLSKSITTLLADVRMLLIIPLFAYSGLQQA---FVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 184 (312)
Q Consensus 109 ~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~---f~~~~~~~~~~-s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~ 184 (312)
+++.++..+.++||+.+.+.+..+....... .+...|.+.+. +...+.+..|+.....++.++++....|++.||+
T Consensus 202 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~ 281 (396)
T TIGR00882 202 AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI 281 (396)
T ss_pred CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1223445677889987555444322211111 11122222221 1122345678888888889999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh-hhHHH-HHHHH
Q 021469 185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQ 262 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~-~afa~-~~~~q 262 (312)
++|+ .+.++.++....+... .+.++ ++...+..++.|++....+........+..+++.+ ...+. ++...
T Consensus 282 g~~~-~l~~~~~l~~l~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~ 353 (396)
T TIGR00882 282 GAKN-ALLIAGTIMSVRIIGS--SFATT-----ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAK 353 (396)
T ss_pred ccch-hHHHHHHHHHHHHHHH--HhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHH
Confidence 8775 4445554444333321 12222 24456678888888777666555566666655442 33444 67788
Q ss_pred HHHHHHHHHhhhhh
Q 021469 263 CASIAVVFFIGPYI 276 (312)
Q Consensus 263 s~g~ai~f~~~~~l 276 (312)
.+|..++..+...+
T Consensus 354 ~lg~~~~~~l~G~l 367 (396)
T TIGR00882 354 QLAMIFLSTLAGNM 367 (396)
T ss_pred HHHHHHHHHhHHHH
Confidence 88888887766654
No 58
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.84 E-value=8.2e-07 Score=86.87 Aligned_cols=238 Identities=13% Similarity=0.037 Sum_probs=137.4
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCcccc--ccchhh-
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKG--EKETAD- 99 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~--~~~~~~- 99 (312)
++++|++..|++......+..+|..+...+....+ .+..|.+...+.++..++. .++|++++++ +.|...
T Consensus 125 ~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g------wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~ 198 (495)
T PRK14995 125 EEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY------WGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHA 198 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC------hHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhH
Confidence 35689999999999999999999999877754321 3456666665566555544 4455432211 111000
Q ss_pred ----------------cchhhhhH-----------------HHHHHHH-----HHHhhcChhhHHHHHHHHhhhhHh-hh
Q 021469 100 ----------------ASVNFYSY-----------------LVSLSKS-----ITTLLADVRMLLIIPLFAYSGLQQ-AF 140 (312)
Q Consensus 100 ----------------~~~~~~~s-----------------~~~~~~~-----~~~~~~~~~~lll~p~~~~~G~~~-~f 140 (312)
.....+.+ ..+|.+. ..+++++|......-..+..++.. ++
T Consensus 199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~ 278 (495)
T PRK14995 199 LMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF 278 (495)
T ss_pred HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence 00000000 0111110 135677776544333333222211 11
Q ss_pred hhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 021469 141 VWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 218 (312)
Q Consensus 141 ~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (312)
. -.++ .+.....| ..+.|+.+..++++..+++.+.|++.||+++|+ .+..+.++....+.+.. ...++.+ +
T Consensus 279 ~-~~~~-~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~g~~~~~~~~~~l~-~~~~~~~---~ 351 (495)
T PRK14995 279 E-LLMA-QELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL-VATGGMALSALSFYGLA-MTDFSTQ---Q 351 (495)
T ss_pred H-HHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHH-HhcCCCc---h
Confidence 1 0111 11111122 346788999999999999999999999998765 44556555544433322 1222211 2
Q ss_pred hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 219 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+......++.|++.+..+...........|++ ...+.++++..+.+|.+++-.+.+
T Consensus 352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g 408 (495)
T PRK14995 352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFG 408 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 33456778889999988877777776666644 467889999999999888776554
No 59
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.84 E-value=4.1e-07 Score=83.73 Aligned_cols=228 Identities=12% Similarity=0.050 Sum_probs=129.8
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC-CcC---------CCCchhhHHHHHHHHHHHHHHHHhccCCcccccc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGS---------TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 95 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~-~~~---------~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~ 95 (312)
|+..+..++.-+++..|.++|.++...+..... +.. ....+..|.+..++..+-.+.+.+.+.|+.++++
T Consensus 42 ~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~ 121 (310)
T TIGR01272 42 ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD 121 (310)
T ss_pred chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc
Confidence 568889999999999999999999876653211 100 0112345555544444444455566555533222
Q ss_pred chhhcchhhhhHHHHHHHHHHHhhcChhh-HHHHHHHHhhhhHhhhhh--hcccccccccccccchhhHHHHHHhHHHHH
Q 021469 96 ETADASVNFYSYLVSLSKSITTLLADVRM-LLIIPLFAYSGLQQAFVW--AEFTKEIVTPALGVSGVGGAMAVYGAFDAI 172 (312)
Q Consensus 96 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-lll~p~~~~~G~~~~f~~--~~~~~~~~s~~lg~~~~g~v~~~~g~~~~i 172 (312)
+ ++.+.++. ++ ..+.+++|+. +..+-+++|.|.|.+... ..|-+......+..+..+.....+..+.++
T Consensus 122 ~-~~~~~~~~----~~---~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~i 193 (310)
T TIGR01272 122 V-ARVSSGDT----TQ---KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMV 193 (310)
T ss_pred c-cccccccc----cc---hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 1 11110010 01 1123445554 556778889998887653 122210000012234567778889999999
Q ss_pred HHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChh
Q 021469 173 CSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE 252 (312)
Q Consensus 173 g~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~ 252 (312)
|.++.+++.||+++|+.+ .++.++......+ ....+ . .......++.|++-+.......+...+.++++..
T Consensus 194 Gr~~~~~l~~r~g~~~~l-~~~~~l~~~~~~l-~~~~~-~------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~ 264 (310)
T TIGR01272 194 GRFIGSAVMPMISQGRYL-AFNAFLAVLLSIG-AALTH-G------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTS 264 (310)
T ss_pred HHHHHHHHHHHhCHHHHH-HHHHHHHHHHHHH-HHHcC-C------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 999999999999866533 3444443333222 11221 1 1233455578899888888888888888877665
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 021469 253 GAFAQLKVWQCASIAVVFF 271 (312)
Q Consensus 253 ~afa~~~~~qs~g~ai~f~ 271 (312)
++.++. ..-.+|.++.-.
T Consensus 265 ~asai~-~~~~~Gg~i~P~ 282 (310)
T TIGR01272 265 QGSGIL-CLAIVGGAIVPL 282 (310)
T ss_pred hhHHHH-HHHHhcchHHHH
Confidence 666664 333344444433
No 60
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=1.3e-06 Score=85.05 Aligned_cols=241 Identities=15% Similarity=0.142 Sum_probs=147.3
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCcccc-ccchhh-----
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG-EKETAD----- 99 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~-~~~~~~----- 99 (312)
+..+...+..|.....|.++|..++-.+..... .+..|.+..++..+..+..++++++++.. ++..++
T Consensus 154 ~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~------~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~ 227 (468)
T TIGR00788 154 SAGPSLVSWMWGASATGGLISSLLGGPLLDKTL------TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM 227 (468)
T ss_pred CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcC------cchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh
Confidence 445667788999999999999988876654322 23456666666666655556666643111 110000
Q ss_pred --cchhhhhHHHHHHHHHHHhhcChhhHH-HHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHH
Q 021469 100 --ASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAIC 173 (312)
Q Consensus 100 --~~~~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig 173 (312)
.........++.+++.++.+++|++.. +...++ |... .+.....|. +-...+| .+.+|.+....+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~--~~~~~lG~s~~~~G~~~~~~~v~~i~g 304 (468)
T TIGR00788 228 ALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PGASGSVFC--ATTQCLPGGPSFSGMSKVVGNLGSLCG 304 (468)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CCCCceeEE--EEcccCCCCcchhhhHHHHHHHHHHHH
Confidence 000111235666788888889988855 333343 2211 111111111 1111233 457899999999999999
Q ss_pred HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-h--cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469 174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-I--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 250 (312)
Q Consensus 174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~ 250 (312)
..+.+++.+|++.|+ ++.++.++...+..... . .|.......+.++.....++-+++.+...+....++.+.-|++
T Consensus 305 ~~~~~~~~~~~~~r~-~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~ 383 (468)
T TIGR00788 305 VGGYDRFLKTFPYRL-LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG 383 (468)
T ss_pred HHHHHHHHhhCCHHH-HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC
Confidence 999999999888554 55566666554432211 1 1211100011234556677888888888888888888888765
Q ss_pred h-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 251 T-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 251 ~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
. ...++++..++++|..++-.++..+
T Consensus 384 ~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 384 CESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4789999999999999999877754
No 61
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.83 E-value=9.9e-07 Score=84.62 Aligned_cols=103 Identities=11% Similarity=-0.018 Sum_probs=53.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+..+.......+..++++.+.|++.||++||+.+...+.+..+............+. +...+.+..+.+++-+...
T Consensus 279 ~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 354 (432)
T PRK10406 279 NVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS----PYAAFGLVMCALLIVSFYT 354 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc----HHHHHHHHHHHHHHHHHHH
Confidence 355666667777788889999999999987764432222221111111111111111 1112222221222223333
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHH
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQC 263 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs 263 (312)
...+.+..+.+|.+ +..+.++.+...+
T Consensus 355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 355 SISGILKAEMFPAQVRALGVGLSYAVAN 382 (432)
T ss_pred HHHHHHHHHHCCCCccchhhhHHHHHHH
Confidence 44566778899864 4667777665544
No 62
>PRK10054 putative transporter; Provisional
Probab=98.82 E-value=6.6e-07 Score=84.97 Aligned_cols=225 Identities=13% Similarity=0.104 Sum_probs=128.3
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~~ 103 (312)
++++++..|+.....+++.++|..+...+... + .+..|.+..++..++.++. +++|+++++++++
T Consensus 127 ~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-g------~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~------- 192 (395)
T PRK10054 127 STSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-S------INLPFWLAAICSAFPLVFIQIWVQRSEKAIATE------- 192 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c------cCcHHHHHHHHHHHHHHHHHHHHhccccccccc-------
Confidence 46799999999999999999999887766532 1 1234555555555654443 4454432221111
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhh-h--hhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQA-F--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRL 180 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~-f--~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l 180 (312)
+++. ++..+.++||+.+.+....+...+..+ + +...|.........+...++.+...+++..+......|++
T Consensus 193 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 267 (395)
T PRK10054 193 TGSV-----WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRR 267 (395)
T ss_pred hhhh-----hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHH
Confidence 0000 112356788887665544332222111 1 1112211111111223456777888888888888899999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHH
Q 021469 181 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK 259 (312)
Q Consensus 181 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~ 259 (312)
.||+++|+ .+..+.++....+.... ...++ .+...+..+++|+++.......+..+.+..|++. .++++...
T Consensus 268 ~~~~~~~~-~l~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 340 (395)
T PRK10054 268 LNAANIRP-LMTAGTLCFVIGLVGFI-FSGNS-----LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS 340 (395)
T ss_pred HccCCchh-HHHHHHHHHHHHHHHHH-HcchH-----HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence 99987665 44455544444433221 11111 2234567889999998877777778888777544 46777544
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
...+|.+++-.....+
T Consensus 341 -~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 341 -LGWLGAAINPLVSGVI 356 (395)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 3446677776666654
No 63
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.82 E-value=1.6e-06 Score=82.38 Aligned_cols=224 Identities=12% Similarity=0.042 Sum_probs=125.1
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccccchhhcch
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASV 102 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~~~~~~ 102 (312)
+++++++..|+.-...+.+..+|..+...+... + .+..|.+..++.++..++. .++|+++ ++++
T Consensus 129 ~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~-g------~~~~f~~~~~~~~~~~i~~~~~~~~~~-~~~~------- 193 (400)
T PRK11646 129 RPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY-D------FRLVCATGAVLFVLAAAFNAWLLPAYK-LSTV------- 193 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h------HHHHHHHHHHHHHHHHHHHHHhCCccc-cccc-------
Confidence 357899999999999999999999888666521 1 2344544444444444333 3444321 1110
Q ss_pred hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccc-ccchhhHHHHHHhHHHHHHHHHHhhhh
Q 021469 103 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL-GVSGVGGAMAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 103 ~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~l-g~~~~g~v~~~~g~~~~ig~~~~G~l~ 181 (312)
.++.++.. .+.++||+.+.+.-.+.-............| .+..+.. ....+|......++....+....+++.
T Consensus 194 --~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 267 (400)
T PRK11646 194 --RTPVREGM---TRVLRDKRFVTYVLTLTGYYMLAVQVMLMLP-IMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWS 267 (400)
T ss_pred --chhhHHHH---HHHHcCchHHHHHHHHHHHHHHHHHHHHhhh-hhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01112222 2456788765433222111111100111111 1111111 224567777777777776666667777
Q ss_pred cC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHH
Q 021469 182 TG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLK 259 (312)
Q Consensus 182 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~ 259 (312)
|| ++.++ .+..+.++........ .+.++ .+...+..+++|.+.+........++.+..|+ +..++++.++
T Consensus 268 ~~r~~~~~-~~~~~~~~~~~~~~~l--~~~~~-----~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~ 339 (400)
T PRK11646 268 EKRFRLEH-RLMAGLLIMSLSMFPI--GMVSN-----LQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSR 339 (400)
T ss_pred HHhcchhH-HHHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHH
Confidence 64 44333 3344444443333222 12222 12344556778888888888888888888875 4468999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 021469 260 VWQCASIAVVFFIGPYI 276 (312)
Q Consensus 260 ~~qs~g~ai~f~~~~~l 276 (312)
...++|..++-.+.+.+
T Consensus 340 ~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 340 LGLALGGAIGYIGGGWL 356 (400)
T ss_pred HHHHHHHHhcccchHHH
Confidence 99999999998877764
No 64
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.82 E-value=1e-06 Score=86.04 Aligned_cols=103 Identities=12% Similarity=-0.012 Sum_probs=56.3
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHH-HHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA-QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
.+.......++..++..+.|++.||++||+ .+..+.+. ...+.........++ ....++..++.|++-+....
T Consensus 288 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~g 361 (490)
T PRK10642 288 GVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-FVILGSVALFVLAIPAFILINSNV-----IGLIFAGLLMLAVILNCFTG 361 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 455556677888899999999999999876 43344332 222221111111111 12233344555555555555
Q ss_pred hhHhHHHHhccCCh-hhhHHH-HHHHHHHHHH
Q 021469 238 QLSALLGILFKHDT-EGAFAQ-LKVWQCASIA 267 (312)
Q Consensus 238 ~~~~i~g~~~~~~~-~~afa~-~~~~qs~g~a 267 (312)
....++...+|.+. ..+.+. +++....|..
T Consensus 362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred HHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 56667777888654 445664 4554444433
No 65
>PRK09669 putative symporter YagG; Provisional
Probab=98.80 E-value=9e-07 Score=85.23 Aligned_cols=232 Identities=9% Similarity=-0.051 Sum_probs=124.8
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcC-CCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS-TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 104 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~-~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~ 104 (312)
++|++..+..+...+.+..+++++...+.....+.+ .......+.++.++..+..++.++.. +|+.++++ ++
T Consensus 142 ~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~-~e~~~~~~------~~ 214 (444)
T PRK09669 142 RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMT-KERYTPEV------DN 214 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCe-EEecCCCC------cC
Confidence 568888898888888888888866533322111101 11112344445554444443333321 22211111 01
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccc-hhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTG 183 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~l~d~ 183 (312)
+.+.++++ ..+++||+.+.+.-..+..........+... -+....++.. ..+.++....+..+++..+.+++.||
T Consensus 215 ~~~~~~~~---~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r 290 (444)
T PRK09669 215 SSSVWKDL---KLLLGNSQWRIMFIFNVVLLTAVVTRGGATL-YYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK 290 (444)
T ss_pred CCCHHHHH---HHHhCCchHHHHHHHHHHHHHHHHHHhhhhh-eeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233433 3457888876665554443333333222110 0111122222 23344445567778888899999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--------hhhH
Q 021469 184 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--------EGAF 255 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--------~~af 255 (312)
+++|+ .+..+.+....+....+ ..++++ .+..++..+++|++.+..+....+++++..+.++ ...+
T Consensus 291 ~gk~~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~ 364 (444)
T PRK09669 291 FDRVR-AFKWTIVAFVILSALIF-FIPPSN----VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVF 364 (444)
T ss_pred hChHH-HHHHHHHHHHHHHHHHH-HhCcch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHH
Confidence 98765 33344433332222222 222221 2346677789999999999999999988764211 2458
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 021469 256 AQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~ 274 (312)
+.+.+.+.+|.+++-.+..
T Consensus 365 s~~~~~~klg~alg~~i~g 383 (444)
T PRK09669 365 STNLFAIKLGLAIGGAVVG 383 (444)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888888888887765544
No 66
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.80 E-value=1.4e-06 Score=83.70 Aligned_cols=259 Identities=10% Similarity=0.009 Sum_probs=123.3
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCcccc-----c---
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG-----E--- 94 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~-----~--- 94 (312)
++++||+..|+.....+.+..+|+.+........ ...+..|.+..++.++..++ .+++|+++++. +
T Consensus 148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (438)
T TIGR00712 148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-----NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR 222 (438)
T ss_pred CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc
Confidence 3567999999999999999988887654332211 11244566655555554433 44555432210 0
Q ss_pred cch-hh--cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccccc--cchhhHHHHHHhH
Q 021469 95 KET-AD--ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGA 168 (312)
Q Consensus 95 ~~~-~~--~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~ 168 (312)
+|. ++ .+.+++.+.++.+++ +.++|+++..+...... .....++. . +...+..+..| ....+..+..+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p~~l~~~~g~s~~~~~~~~~~~~~ 298 (438)
T TIGR00712 223 NDYPDDYNEKAEQELTAKEIFMQ--YVLPNKLLWYIAIANVFVYLLRYGVL-D-WSPTYLKEVKHFALDKSSWAYFLYEY 298 (438)
T ss_pred cccccccccccccccchHHHHHH--HHccCchHHHHHHHHHHHHHHHHHHH-H-hHHHHHHHccCCChhhHHHHHHHHHH
Confidence 000 00 000011112222211 36788877555333222 11111111 1 11112122223 2456777788999
Q ss_pred HHHHHHHHHhhhhcCCCC-hhhHHHHHHHHHH--HHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 169 FDAICSLAAGRLTTGLPS-ITFIVSGGAIAQV--VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 169 ~~~ig~~~~G~l~d~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
..+++.++.|++.||+++ |+... +..... ....+.+... +..+ ++...+..+.+|++-............+
T Consensus 299 ~~~ig~~~~g~l~dr~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 372 (438)
T TIGR00712 299 AGIPGTLLCGWMSDKVFKGNRGAT--GVFFMTLVTIAVIVYWMN-PAGN---PLVDMICMIVIGFLIYGPVMLIGLHALE 372 (438)
T ss_pred HHHHHHHHHHHHHHHhccCcccHH--HHHHHHHHHHHHHHHHhc-CCCc---hHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 999999999999999843 22221 211111 1111111111 1111 1222333344454332222333345667
Q ss_pred hccCC-hhhhHHHHHHHHHHH-HHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHH
Q 021469 246 LFKHD-TEGAFAQLKVWQCAS-IAVVFFIGPYI----SLQAMLIVMVVGICVALVGIL 297 (312)
Q Consensus 246 ~~~~~-~~~afa~~~~~qs~g-~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~ 297 (312)
.+|++ +..+.++.+....+| .+++-.+.+.+ ....-++++.+..+++.+...
T Consensus 373 ~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 373 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred hcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 77754 457888888776665 34554443332 223334444555555555433
No 67
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.80 E-value=2.5e-07 Score=85.66 Aligned_cols=239 Identities=13% Similarity=0.021 Sum_probs=121.4
Q ss_pred CceeechhhHHHHHHHHhHhhhh-HHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccCCccccc--c-c---
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGE--K-E--- 96 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~-li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~--~-~--- 96 (312)
+++|++..|+.....+.+.++|. ++...+....+ .+..|.+..++.++..++. +++++++++++ + +
T Consensus 114 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T TIGR00881 114 RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS------WHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP 187 (379)
T ss_pred HhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC------chhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc
Confidence 46789999999999999999998 45544432211 2344555555555444443 34443222110 0 0
Q ss_pred --hhhcc---hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHH
Q 021469 97 --TADAS---VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAF 169 (312)
Q Consensus 97 --~~~~~---~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~ 169 (312)
+.+.+ .++..+.++ ....+++++|+...+....+.............+ .+..+..| ....++....++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 264 (379)
T TIGR00881 188 NEEPDGDAEKKEEELTKKQ--IFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP-LYLTQEKGFSKEKASWAFTLYELG 264 (379)
T ss_pred ccccccccccccccccchH--HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHH
Confidence 00000 000001111 1123456777765443322222111111111111 11112223 34578888889999
Q ss_pred HHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc
Q 021469 170 DAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 248 (312)
Q Consensus 170 ~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~ 248 (312)
.+++.++.|++.||. ++|+.................+ ...+..+ +....+..++.|+.-.........+..+..|
T Consensus 265 ~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (379)
T TIGR00881 265 GLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY-WLNPAAN---PLMDLICLFALGFLVYGPQMLIGVIASELAP 340 (379)
T ss_pred cchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hcCcchh---HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC
Confidence 999999999999975 3332222111111111111111 1111111 2234555666776555555556667778787
Q ss_pred CC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 249 HD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 249 ~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
++ +..+.+++.....+|..++-.+.+.+
T Consensus 341 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 369 (379)
T TIGR00881 341 KKAAGTAAGFVGFFAYLGGILAGLPLGYL 369 (379)
T ss_pred cchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 54 46789999999999988777665543
No 68
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.77 E-value=1.7e-06 Score=84.23 Aligned_cols=159 Identities=13% Similarity=0.077 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccccccccc-chhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469 107 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTGLP 185 (312)
Q Consensus 107 s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~-~~~g~v~~~~g~~~~ig~~~~G~l~d~~~ 185 (312)
++++.++. +++||.++.++-..+..........+..+ -+....++. +..+.++...+++++++..+.+++.||++
T Consensus 219 ~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g 294 (473)
T PRK10429 219 TLKDIVAL---IYKNDQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLS 294 (473)
T ss_pred CHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444432 45787776655544433333333322211 111111232 23556666677889999999999999998
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhc--ccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-------h-hhhH
Q 021469 186 SITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-------T-EGAF 255 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-------~-~~af 255 (312)
+|+ .+.++.++.+.+.+..+.. .+++ ++++..+..++.|++.+..+....+++.+.-+.+ . ...+
T Consensus 295 kk~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~ 369 (473)
T PRK10429 295 RRI-LWAGASIFPVLSCGVLLLMGLAAPH----NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY 369 (473)
T ss_pred cHH-HHHHHHHHHHHHHHHHHHHhccCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence 775 4444444433332222211 1222 1234566778899999999998888888874321 1 2478
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 021469 256 AQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~ 274 (312)
+...+.+-+|.+++-.+.+
T Consensus 370 s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 370 SVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888888888888766544
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.77 E-value=6e-06 Score=78.15 Aligned_cols=112 Identities=14% Similarity=0.039 Sum_probs=67.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...|.......++.+++.++.|++.||+++|+ .+..+.+.....+... ...++ ++...+..++.+++-+...
T Consensus 252 ~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 252 KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-LMRVAAVAGVCFYAGM--LMAHS-----PAILLGLQLLNAIYIGILG 323 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHHHHHHHHH
Confidence 35666666666778889999999999998765 4334433333222221 12222 1222222333333333333
Q ss_pred hhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
........+.+|++...+.+.+....++|.+++-.+.+.+
T Consensus 324 ~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i 363 (393)
T PRK15011 324 GIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIV 363 (393)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455677887777889998888899999998888765
No 70
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.77 E-value=5.1e-07 Score=87.91 Aligned_cols=262 Identities=12% Similarity=0.052 Sum_probs=123.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhc---CCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC--Cccccccchhh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLK---DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK--EEDKGEKETAD 99 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~---~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~--~~~~~~~~~~~ 99 (312)
++.||+..|+.....+.+..+|+.+...+.. .....+....+..|.+..++.++..++..++++ |+.+.++..++
T Consensus 154 ~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~ 233 (476)
T PLN00028 154 GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKS 233 (476)
T ss_pred hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhc
Confidence 4689999999998888888888766643321 110000112456677776666665555555542 22111110000
Q ss_pred cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHH-hhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHH
Q 021469 100 ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 100 ~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~-~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~ 176 (312)
. ..++.+..+ ...+.+++++..++...++ ..+....+. +..+.-+ ....| .+..+.+...++++.+++.++
T Consensus 234 ~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l-~~~~g~s~~~a~~~~~~~~~~~~ig~~~ 307 (476)
T PLN00028 234 G-TMPKDSFSK---VLRYGVTNYRTWILALTYGYSFGVELTMD-NIIAEYF-YDRFGLSLETAGAIAASFGLMNLFARPA 307 (476)
T ss_pred C-ccccccHHH---HHHHHHcCchhHHHHHHHHHHHHHHHHHH-hHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 001111222 2234577888654443322 222222211 1111111 11123 345678888899999999999
Q ss_pred HhhhhcCCCCh------hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469 177 AGRLTTGLPSI------TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 250 (312)
Q Consensus 177 ~G~l~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~ 250 (312)
.|++.||++|| ..+..+..++..... + ...+.++ .+...+..++++++-+..+...+.+.....|++
T Consensus 308 ~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~-~-~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (476)
T PLN00028 308 GGYLSDVAARRFGMRGRLWALWIVQTLGGVFC-I-WLGRANS-----LGAAIVVMILFSIFVQAACGATFGIVPFVSRRS 380 (476)
T ss_pred hHHHHHHHHHhcCcchhHHHHHHHHHHHHHHH-H-Hhcccch-----HHHHHHHHHHHHHHHHHhhhhhcccCcccChhh
Confidence 99999987643 112212222211111 1 1112111 122222333344433333333344444445554
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHHHHh
Q 021469 251 TEGAFAQLKVWQCASIAVVFFIGPY---ISLQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 251 ~~~afa~~~~~qs~g~ai~f~~~~~---l~~~~~~~il~~~~~~~~~~~~~~ 299 (312)
...+.++......+|..++=.+-.. .+...-+++..++.+++.+..+++
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 5566777666555555443222110 112233444445666676666665
No 71
>PRK15075 citrate-proton symporter; Provisional
Probab=98.76 E-value=1.7e-06 Score=82.99 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=54.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
...++...+++++.++++.+.|++.||++||+..+ .+..+... .+.... ...++++ .....+..++.|++.+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~-~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~g~~ 348 (434)
T PRK15075 274 ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLI-AFTVLAILTAYPALS-WLVAAPS---FARMLAVELWLSFLYGSY 348 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHHH-HHHcCCc---hHHHHHHHHHHHHHHHHH
Confidence 34577777889999999999999999998776443 33222221 111111 1111111 111222233445555566
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHH
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQL 258 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~ 258 (312)
+...+..+.+.+|++. ..++++.
T Consensus 349 ~~~~~~~~~e~~p~~~rg~~~g~~ 372 (434)
T PRK15075 349 NGAMVVALTEVMPAEVRTAGFSLA 372 (434)
T ss_pred HhhHHHHHHHHCCCCccchheeHH
Confidence 6655667778887543 4566653
No 72
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.76 E-value=7.2e-07 Score=85.18 Aligned_cols=244 Identities=11% Similarity=-0.035 Sum_probs=117.8
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccCCccccc---cchhh-
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGE---KETAD- 99 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~~~~~~~---~~~~~- 99 (312)
+++|++..|++......+.++|..++..+.......+....+..|.+..+..++..++ .+++|+++.+.+ +++++
T Consensus 127 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~ 206 (412)
T TIGR02332 127 AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKA 206 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHH
Confidence 3579999999999999999999988876653211001112456777766665554443 355655332111 00000
Q ss_pred c-----------chhhhh--HHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHH
Q 021469 100 A-----------SVNFYS--YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMA 164 (312)
Q Consensus 100 ~-----------~~~~~~--s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~ 164 (312)
. ++++.. .....-++.++.+++|+.++....++.......-...-.|.-+.+...| ....+....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~ 286 (412)
T TIGR02332 207 LKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAA 286 (412)
T ss_pred HHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhh
Confidence 0 000000 0001112344545566654444332222111111112122222110112 234566777
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
..+++.++|.++.|++.||+++|+.......++....+.+.. ..++ +........+.+++...-.........
T Consensus 287 ~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~ 359 (412)
T TIGR02332 287 IPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS--ATDH-----NLIQLLGIIMASMGSFSAMAIFWTTPD 359 (412)
T ss_pred HHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH--hcCC-----HHHHHHHHHHHHHHhhhhhhHHHhhcc
Confidence 889999999999999999998665333333333333332211 1111 111211112222222221112222223
Q ss_pred HhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 245 ILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 245 ~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
+.+|. +...++++.+....+|.+++-.+-+.
T Consensus 360 ~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 360 QSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred cccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 34543 34568999999999888887655443
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.75 E-value=8.9e-07 Score=82.36 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=110.9
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchhhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 105 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~ 105 (312)
+++++..|+.......+..+|..+...+..... ...+..|.++.++..+.. ..++|+.+++++++++ +++
T Consensus 118 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~----~~w~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~ 187 (355)
T TIGR00896 118 QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG----GHWQQALAWWALPALLAL--LAWIPQVRRRVAANQT----TTR 187 (355)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH--HHHhhhhccccCCCCC----CCC
Confidence 468999999998888888888877655532211 112344544444333332 2233322111111100 000
Q ss_pred hHHHHHHHHHHHhhcChhhHHHHHHH-HhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469 106 SYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 184 (312)
Q Consensus 106 ~s~~~~~~~~~~~~~~~~~lll~p~~-~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~ 184 (312)
+...+.++||+...+...+ +......++. +..+.-+.+.-...++.+.....++++.++++++.|++.||+
T Consensus 188 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~ 259 (355)
T TIGR00896 188 -------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLI-GWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRV 259 (355)
T ss_pred -------CCCchhhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Confidence 1122456777765433222 2112211111 111111111112235678888999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh--hhhHHHHHHHH
Q 021469 185 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQ 262 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~q 262 (312)
++|+.....+.++...+..... +.++. . .....+++|++.+.......+.+....++++ ..++++.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~-~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 331 (355)
T TIGR00896 260 KDQRGIVAVLAVLQLVGLCGLL--FAPMH-----G-LWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIG 331 (355)
T ss_pred ccchHHHHHHHHHHHHHHHHHH--Hhhhh-----H-HHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 5443344444444433333221 22221 1 1224567888888877766666666554432 23455544444
Q ss_pred HHHHHHHHHh
Q 021469 263 CASIAVVFFI 272 (312)
Q Consensus 263 s~g~ai~f~~ 272 (312)
.+|.+++-.+
T Consensus 332 ~~~~~~gp~~ 341 (355)
T TIGR00896 332 YLLAALGPLF 341 (355)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.74 E-value=3.5e-07 Score=85.00 Aligned_cols=236 Identities=11% Similarity=0.041 Sum_probs=113.2
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC----CCcCCCCchhhH-HHHHHHHHHH-HHHHHhccC-Cccccccc
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD----KGGSTSGTTLLF-IVFLGVITLG-TILMCFLRK-EEDKGEKE 96 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~----~~~~~~~~~~~~-~if~~i~~~g-~~l~lfL~~-~~~~~~~~ 96 (312)
++++|++..++.....+.+..+|..+...+.... ++......+..| .+..++..+. .+...+.++ |+++++++
T Consensus 120 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
T TIGR00886 120 PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATG 199 (366)
T ss_pred CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccch
Confidence 3467899999998888888888887765443210 000001122233 4333333332 333333333 22211111
Q ss_pred hhhcchhhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHH
Q 021469 97 TADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAIC 173 (312)
Q Consensus 97 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig 173 (312)
+.+.+..+...-++..++..+.+++|+.+.+.- .+.+.+.+.++. +..+. +..+..| ....+....++++..+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 277 (366)
T TIGR00886 200 KLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVS-SIFAM-FFKDQFGLSKVTAGAYASLGGLLGSLA 277 (366)
T ss_pred hcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHH-HHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 100000000011122335566788888654433 333333332222 11111 2122223 345677788889999999
Q ss_pred HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhh
Q 021469 174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG 253 (312)
Q Consensus 174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~ 253 (312)
..+.|++.||+++|+.. ..+.+....+..+......++.+ .+..++...+.++.-+..+...+.+.....|++..+
T Consensus 278 ~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~ 353 (366)
T TIGR00886 278 RPLGGAISDRLGGARKL-LMSFLGVAMGAFLVVLGLVSPLS---LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGA 353 (366)
T ss_pred hhccchHHHhhccchhH-HHHHHHHHHHHHHHHhcCCCcch---HHHHHHHHHHHHHHhccccchhhhcchhhchhhccc
Confidence 99999999999876433 23333332222222212221101 222222233333333333344556667777766667
Q ss_pred hHHHHHHHHHHH
Q 021469 254 AFAQLKVWQCAS 265 (312)
Q Consensus 254 afa~~~~~qs~g 265 (312)
+.++.....++|
T Consensus 354 ~~g~~~~~~~~g 365 (366)
T TIGR00886 354 VSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhccCC
Confidence 888877766554
No 75
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.74 E-value=1.3e-06 Score=84.97 Aligned_cols=115 Identities=11% Similarity=0.053 Sum_probs=73.4
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
....+.++..++++.++++.+.|++.||+++|+ .+.++.++.....++.. ....+ + .+...++.++.++.....
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~ 383 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRK-AYVCSLLISQLLIIPVF-AIGGA-N---VWVLGLLLFFQQMLGQGI 383 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHh-hcccc-H---HHHHHHHHHHHHHHhccc
Confidence 356788899999999999999999999998765 33344333332222221 11111 0 122333344444433334
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
....+.++.+.+|++ ...+++++.....+|..++-.+.+.+
T Consensus 384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHH
Confidence 556677888888754 46789999999999988887776654
No 76
>PRK10504 putative transporter; Provisional
Probab=98.69 E-value=4.7e-06 Score=80.63 Aligned_cols=239 Identities=10% Similarity=-0.037 Sum_probs=134.4
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc-cCCccc-cccchh----
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL-RKEEDK-GEKETA---- 98 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL-~~~~~~-~~~~~~---- 98 (312)
++++++..|+.....+.+..+|..+...+.... ..+..|.+...+..++.++.... |+.+.+ .|.|..
T Consensus 129 ~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (471)
T PRK10504 129 REQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA------SWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLL 202 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHH
Confidence 457788999988888899999888876654321 12445555555555555544333 322211 121210
Q ss_pred ------------hcchh-hhhH-----------------HHHH-----HHHHHHhhcChhhHHHHHHHHhhhhHhhhhhh
Q 021469 99 ------------DASVN-FYSY-----------------LVSL-----SKSITTLLADVRMLLIIPLFAYSGLQQAFVWA 143 (312)
Q Consensus 99 ------------~~~~~-~~~s-----------------~~~~-----~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~ 143 (312)
+..+. .... ..+| -+-..++++||+.+......+..++..+-...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 282 (471)
T PRK10504 203 LAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPF 282 (471)
T ss_pred HHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000 0000 01124578888887766655544433222111
Q ss_pred cccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHH
Q 021469 144 EFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP 221 (312)
Q Consensus 144 ~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
..+ .+.....| ....++.+..+.++..++..+.|++.||+++|+ ++..+..+......+.. ..++.. +.+..
T Consensus 283 ~~~-~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~ 356 (471)
T PRK10504 283 MTP-VFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR-VLVATTLGLALVSLLFM-LVALLG---WYYLL 356 (471)
T ss_pred HHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHH-hccccc---cHHHH
Confidence 111 11111112 235677888888889999999999999998765 44445444433322221 121111 11223
Q ss_pred HHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 222 LIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 222 ~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.+..++.|++.+........+..+..|++. ..+++++.+.+.+|.+++-.+.+.
T Consensus 357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 411 (471)
T PRK10504 357 PFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGL 411 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 345667778887777777778878887654 478999999999999888777664
No 77
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.66 E-value=1e-05 Score=78.81 Aligned_cols=117 Identities=9% Similarity=0.041 Sum_probs=77.5
Q ss_pred hhHHHHHHhHHHHHHHHHHh----hhhcC-CCChhhH-HHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHh
Q 021469 159 VGGAMAVYGAFDAICSLAAG----RLTTG-LPSITFI-VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGI 230 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G----~l~d~-~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~ 230 (312)
.+......++.-++.+.+.. ++.|| .+.+... +.+|.++...++....+ .+..+....++++..+..+++|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 45566667777677666544 44443 2212212 46777777666554322 12111111234567889999999
Q ss_pred hhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 231 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 231 ~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
|+.+.....++++.+..|++ +.++++++.+..++|..++-.+.+.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~ 439 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF 439 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865 4689999999999999888666554
No 78
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.66 E-value=1.8e-06 Score=81.14 Aligned_cols=262 Identities=14% Similarity=0.129 Sum_probs=146.1
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC--C----------CcCCCCchhhHHHH-HHHHHHHHHHHHhccCCc
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD--K----------GGSTSGTTLLFIVF-LGVITLGTILMCFLRKEE 90 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~--~----------~~~~~~~~~~~~if-~~i~~~g~~l~lfL~~~~ 90 (312)
+++++||-+++=|+.-..+..+=.++........ + ..+....+..+.+= .-..+.+.++++..++++
T Consensus 145 ~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~ 224 (438)
T COG2270 145 TKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAE 224 (438)
T ss_pred CccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccc
Confidence 4568899999999888877766666543322211 1 00111123332221 222334455566666665
Q ss_pred cccccchhhcchhhhhHHHHHHHHHHHhh-cChhh--HHHHHHHHhhhhHhhhhh-hccccccccccccc--chhhHHHH
Q 021469 91 DKGEKETADASVNFYSYLVSLSKSITTLL-ADVRM--LLIIPLFAYSGLQQAFVW-AEFTKEIVTPALGV--SGVGGAMA 164 (312)
Q Consensus 91 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~--lll~p~~~~~G~~~~f~~-~~~~~~~~s~~lg~--~~~g~v~~ 164 (312)
+..+.. +..-..++| ++++++|.. ++++. .++.-+++.-|...-+-. +.|.++. +|. .++....+
T Consensus 225 ~~~~~~----~~~l~~g~k-~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~----~gls~~~lll~g~ 295 (438)
T COG2270 225 KISSPP----PTALRNGFK-ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD----LGLSSTELLLIGI 295 (438)
T ss_pred cccccc----hHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH----cCccHHHHHHHHH
Confidence 432111 011122333 344444433 33332 333333334454433332 2344321 233 34555555
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
...+..++|+++.|+|-||++.|+ ++.++.+.....-+...... ++ .-.++++.+.|+.-+-.|...=+.++
T Consensus 296 ~~~vvA~lg~ii~g~Ld~rfg~k~-vl~~~lvi~~~~~~~~~~~~-~~------~~f~i~gll~g~s~G~~qA~SRSy~~ 367 (438)
T COG2270 296 ALSVVAALGAIIAGFLDERFGSKP-VLMIGLVILSIAALYLIFLE-GE------LDFWILGLLVGTSLGGAQASSRSYLA 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCce-eehHHHHHHHHHHHHHHHcc-cc------HHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 667778999999999988998775 43445444433322222112 11 23677889999999999999999999
Q ss_pred HhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469 245 ILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGILFLTIQ 302 (312)
Q Consensus 245 ~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l-----~~~~~~~il~~~~~~~~~~~~~~~~~ 302 (312)
++.|+++ .+.|++|....=.++-.+=+.-+.+ +.+.....+.+++.++.+.+..+...
T Consensus 368 ~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 368 RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9998766 4789999998666665554433322 24445666667777777776666544
No 79
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.66 E-value=6e-06 Score=77.84 Aligned_cols=261 Identities=15% Similarity=0.124 Sum_probs=126.7
Q ss_pred ccccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHH
Q 021469 2 GWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 81 (312)
Q Consensus 2 ~~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~ 81 (312)
|.|+|.+....+. .++. -++++|++..++......+|.++|.++...+.... ..+..|.+..++..+..+
T Consensus 90 G~g~~~~~~~~~~-~~~~---~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 90 ALGQPFLLNAFAP-AASQ---IREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------GLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HhHhHHHHHHHHH-HHHH---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------chHHHHHHHHHHHHHHHH
Confidence 6677754422221 1221 23578999999999999999999998887775421 245677666666666555
Q ss_pred HH-HhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccccccc-h
Q 021469 82 LM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALGVS-G 158 (312)
Q Consensus 82 l~-lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~lg~~-~ 158 (312)
+. .++|++++++++. . +.+ +..++..++++||+.+.+....+. .....++. +-.|+-+ .+ .|.+ .
T Consensus 160 ~~~~~lp~~p~~~~~~-~-----~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-~wlp~~L-~~-~g~s~~ 227 (368)
T TIGR00903 160 LVLAALPALPFQAAEG-F-----GFK---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLA-IWLEAAL-RP-AGLEDI 227 (368)
T ss_pred HHHHHcCCCCCCCCCC-c-----chH---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH-HHHHHHH-HH-CCCChH
Confidence 43 4565533221110 0 001 112334467788887555433322 22222221 1122222 11 1221 1
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCC---hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPS---ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+....+..+...++ .+.+.||..| |+.......++...... .. .+..+ +........+.|++-...
T Consensus 228 ~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~-~~-~~~~~-----~~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 228 AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL-AL-AFELN-----RLALFAFIGIAGLLMLPA 297 (368)
T ss_pred HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH-HH-HHccc-----cHHHHHHHHHHHHhhhhh
Confidence 233333333334444 4566676532 32222212222111111 11 12212 122333344445544444
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHh-hhhh-hHHHHHHHHHHHHHHHHH
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI-GPYI-SLQAMLIVMVVGICVALV 294 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~-~~~l-~~~~~~~il~~~~~~~~~ 294 (312)
....+.+..+.+|++. ..+.++.+....+|..++-.. ...+ .....+.+..+..+++.+
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~ 359 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFA 359 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4556778889998644 678999998888887444333 3333 233333333444444433
No 80
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.63 E-value=9.7e-06 Score=78.45 Aligned_cols=152 Identities=13% Similarity=0.030 Sum_probs=74.1
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhH-----hhcCC-CC--c-CCC---CchhhHHHHHHHHHHHHHHHHhccCCccc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLA-----VLKDD-KG--G-STS---GTTLLFIVFLGVITLGTILMCFLRKEEDK 92 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~-----~~~~~-~~--~-~~~---~~~~~~~if~~i~~~g~~l~lfL~~~~~~ 92 (312)
++++|+..|++-+.-++|..++.++.-. +.... .+ . ..+ ..+..+.++..+.++..+++.++.+++++
T Consensus 158 ~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~ 237 (462)
T PRK15034 158 KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS 237 (462)
T ss_pred HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 4679999999988888888777765532 11110 00 0 000 01233445555555666555544332221
Q ss_pred cccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhh--hhcccccccccccccchhhHHHHHHhHH
Q 021469 93 GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFV--WAEFTKEIVTPALGVSGVGGAMAVYGAF 169 (312)
Q Consensus 93 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~--~~~~~~~~~s~~lg~~~~g~v~~~~g~~ 169 (312)
++ .+ +++..+.+|+|+..++.- ++.-.|.+.+|. ...|.+.. .+.........+..+.
T Consensus 238 ~~-----------~~----~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~----~~~~~~l~~~~l~~l~ 298 (462)
T PRK15034 238 SR-----------AS----IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ----FPDVNILRLAFFGPFI 298 (462)
T ss_pred cc-----------cC----HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH----cChHHHHHHHHHHHHH
Confidence 11 11 234456778887633322 222233333332 21221111 1111111112234566
Q ss_pred HHHHHHHHhhhhcCCCChhhHHHHHHH
Q 021469 170 DAICSLAAGRLTTGLPSITFIVSGGAI 196 (312)
Q Consensus 170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~ 196 (312)
..++..++|+|.||+++++.+ .++.+
T Consensus 299 ~~l~rplgG~LADRiG~~~vl-~~~~i 324 (462)
T PRK15034 299 GAIARSVGGAISDKFGGVRVT-LINFI 324 (462)
T ss_pred HHHHHHhhHHHHHhcCchHHH-HHHHH
Confidence 777778999999999877533 33433
No 81
>PRK11462 putative transporter; Provisional
Probab=98.63 E-value=7.4e-06 Score=79.52 Aligned_cols=229 Identities=11% Similarity=0.008 Sum_probs=115.1
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcC-CCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcchh
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-DKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 103 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~-~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~ 103 (312)
+++|.+..+......+.+..++.++...+... .++...........++.+++++...++.+. .+|++++++
T Consensus 141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~-~kE~~~~~~------- 212 (460)
T PRK11462 141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFT-TKERVEAPP------- 212 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-ceeccCCCc-------
Confidence 46788888888877777777776664333221 111000111223444444444444333322 232221111
Q ss_pred hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhc---ccccccccccccc-hhhHHHHHHhHHHHHHHHHHhh
Q 021469 104 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE---FTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
++.+.++.+++ +++||..+.+....+..........+. |.+-+ +|.. ..+.++.++++..+++..+.++
T Consensus 213 ~~~~~~~~l~~---~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~g~~~~~~~~l~~~~i~~iig~~l~~~ 285 (460)
T PRK11462 213 TTTSMREDLRD---IWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI----LGTPEVFVAFLTTYCVGNLIGSALAKP 285 (460)
T ss_pred cCCCHHHHHHH---HhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh----cCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12234554443 466777766654433333322222221 21111 2322 2345667888999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------CChh
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------HDTE 252 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~~~~ 252 (312)
+.||+++|+..+ .+.........+.+ ..++++ +...++..+++|++.+..+...++++++.-+ ++.|
T Consensus 286 l~~r~gkk~~~~-~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~ 359 (460)
T PRK11462 286 LTDWKCKVTIFW-WTNALLAVISLAMF-FVPMQA----SITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLT 359 (460)
T ss_pred HHHHhChHHHHH-HHHHHHHHHHHHHH-HhchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCch
Confidence 999998765333 22222222222222 222221 1234555677788877777766777766533 2223
Q ss_pred -hhHHHHHHHHHHHHHHHHHhhh
Q 021469 253 -GAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 253 -~afa~~~~~qs~g~ai~f~~~~ 274 (312)
..++...+.+-+|.+++-.+.+
T Consensus 360 g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 360 GISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3366666667666666655433
No 82
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.62 E-value=2.1e-05 Score=76.97 Aligned_cols=110 Identities=12% Similarity=0.090 Sum_probs=76.3
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhh------HHHHHHHHHHHHHHHHH---hcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITF------IVSGGAIAQVVVFLWIL---INYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++..++.+.+.+++.||.++|+. .+.+|.++...+++.+. ..+....+...+++....+++.|+|..+.
T Consensus 317 ~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~ 396 (489)
T PRK10207 317 LNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFI 396 (489)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 4556666777778888888765431 24566666655554321 01111111122355667899999999999
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
....++.+.+..|++. ..+.+++.+.+++|.+++-.++.
T Consensus 397 ~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 397 SALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred hHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988654 67899999999999999987764
No 83
>PRK10133 L-fucose transporter; Provisional
Probab=98.62 E-value=1e-05 Score=78.08 Aligned_cols=146 Identities=13% Similarity=-0.008 Sum_probs=87.4
Q ss_pred HHhhcChhhHH-HHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH
Q 021469 116 TTLLADVRMLL-IIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS 192 (312)
Q Consensus 116 ~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~ 192 (312)
.+++++|+... ++-.+++.+.+.+.+.- .+.-+..+..| ....++.+..++++.++|.++.|++.||+++|+.+ .
T Consensus 252 ~~ll~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l-~ 329 (438)
T PRK10133 252 SRLARIRHWRWAVLAQFCYVGAQTACWSY-LIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-A 329 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-H
Confidence 35677887543 33344555555433321 11111112223 34678889999999999999999999999876533 3
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHh
Q 021469 193 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~ 272 (312)
.+.++......+ .... +. .......+++|++-+.....+++...+.++++...+.++.. .+..|.++.-.+
T Consensus 330 ~~~~~~~~~~~~-~~~~-~~------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i 400 (438)
T PRK10133 330 AYALIAMALCLI-SAFA-GG------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPV 400 (438)
T ss_pred HHHHHHHHHHHH-HHHc-CC------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHH
Confidence 443333322222 1122 22 12455677899999999999999998888776555666654 344554444333
No 84
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.61 E-value=2.3e-06 Score=82.68 Aligned_cols=151 Identities=14% Similarity=-0.020 Sum_probs=79.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhcc--CCccccccchhhc--
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR--KEEDKGEKETADA-- 100 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~--~~~~~~~~~~~~~-- 100 (312)
+++|++..|+.....+.+.++|..+...+..... ..+..|.+..++.++..++..+++ +|+.+++.++++.
T Consensus 162 ~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-----gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 236 (465)
T TIGR00894 162 PKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-----GWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKY 236 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH
Confidence 3689999999999999999999988766543210 124455555555555544443332 2322111110000
Q ss_pred -----chhh-hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHH
Q 021469 101 -----SVNF-YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAI 172 (312)
Q Consensus 101 -----~~~~-~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~i 172 (312)
+.++ +...+ ....+.++++++..+....+...+.......-.|. +..+..| ....|+......++..+
T Consensus 237 i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~l~~~~g~s~~~~g~~~~~~~~~~~i 312 (465)
T TIGR00894 237 INSSLQGQKGSTRQS---LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPT-FISWVLRVSGKENGLLSSLPYLFAWL 312 (465)
T ss_pred HHhhcccccCCCCCC---CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcChHHhHHHHHHHHHHHHH
Confidence 0000 00000 01234567777655554333222221111111121 1122223 34567777788889999
Q ss_pred HHHHHhhhhcCC
Q 021469 173 CSLAAGRLTTGL 184 (312)
Q Consensus 173 g~~~~G~l~d~~ 184 (312)
++.+.|++.||+
T Consensus 313 ~~~~~g~l~d~~ 324 (465)
T TIGR00894 313 CSIFAGYLADFL 324 (465)
T ss_pred HHHHHHHHHHHH
Confidence 999999999975
No 85
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.58 E-value=2.3e-06 Score=78.58 Aligned_cols=131 Identities=19% Similarity=0.216 Sum_probs=99.1
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|++...+.++..+++.+.|++.||++||+ ++.++.++...+..+.. +.++ .+..++..++.|++.+..
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~ 102 (352)
T PF07690_consen 31 PSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-VLIIGLLLFALGSLLLA--FASN-----FWLLLIARFLLGIGSGFF 102 (352)
T ss_dssp SHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-HHHHHHHHHHHHHHHHH--HHCC-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-eEeehhhhhhhHHHHhh--hhhh-----HHHHhhhccccccccccc
Confidence 356888999999999999999999999999776 66667666665522222 2222 245788899999999999
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHH
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALV 294 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~ 294 (312)
......++.+.+|+ ++..+++......++|..++..+.+.+. .++.+++..++.+++.+
T Consensus 103 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 103 SPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 99999999999986 5678999999999999999988888652 33345555555555544
No 86
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.58 E-value=6.8e-06 Score=80.47 Aligned_cols=108 Identities=14% Similarity=-0.037 Sum_probs=59.5
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
...++.+++.++.+.+.||++||+ +++++..+...+...+.....+.+. ...+.. ..+...+....+....+.+..
T Consensus 343 ~~~~~~i~g~~~~~~l~dr~gRR~-~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 418 (502)
T TIGR00887 343 IALAGTVPGYWVTVFLVDIIGRKP-IQLMGFFILTVLFFVLGFAYNHLST--HGFLAI-YVLAQFFANFGPNATTFIVPG 418 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhcchh-HHHHHHHHHHHHHHHHHHHHHhcch--hHHHHH-HHHHHHHHhcCCCchhhhhhh
Confidence 344567778899999999999875 4334443333222221111211110 011111 111111222223344555667
Q ss_pred HhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 245 ILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 245 ~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.+|.+ +..+.++...+..+|.+++-.+-+.+
T Consensus 419 E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 451 (502)
T TIGR00887 419 EVFPTRYRSTAHGISAASGKAGAIIGQFGFLYL 451 (502)
T ss_pred ccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhh
Confidence 888865 46789999999999988877665543
No 87
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.54 E-value=1.4e-05 Score=81.59 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=75.5
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 239 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~ 239 (312)
....++.++++++|.++.|.+.||+|||+ ++.++.++..++.++. .+.++ .....+..+++|++-+...+..
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~-~l~~~~~lsai~~ll~--~~~~s-----~~~ll~~~~l~g~~~~~~~~~~ 669 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLR-MLAGSMVLSCISCFFL--SFGNS-----ESAMIALLCLFGGLSIAAWNAL 669 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778899999999999999999876 4445554444332221 12222 1223444556677666666778
Q ss_pred HhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 240 SALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 240 ~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.++++++|.+. ..++++......+|..++-.+.+.+
T Consensus 670 ~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 670 DVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999998654 6799999999999999988877643
No 88
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.54 E-value=4e-06 Score=77.28 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=85.8
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.++|.+...+.++..+++.+.|++.||++||+ .+..+.++...+..+. +....++. +.+..++..++.|++.+..
T Consensus 34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 34 SVLSLAALAGMLPYVVLSPIAGALADRYDRKK-VMIGADLIRAVLVAVLPFVALLGGL---NIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH-HHHHHHHHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999999999876 4444444433332222 21221211 1345677888899999999
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
....++++.+.+|++ +.++++......++|..++-.+...+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 151 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM 151 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998754 46789999999999999888877764
No 89
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.50 E-value=7.1e-05 Score=71.39 Aligned_cols=155 Identities=16% Similarity=0.138 Sum_probs=103.6
Q ss_pred HHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc---cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh
Q 021469 113 KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG---VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF 189 (312)
Q Consensus 113 ~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg---~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~ 189 (312)
++.++++|||+++.++-..+..+...+.+.+-.+- +..+ +| .+..|.++.+.-++|++.=...+++.+|++-++
T Consensus 198 ~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~-yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~- 274 (400)
T PF03825_consen 198 LDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSI-YLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW- 274 (400)
T ss_pred hHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-
Confidence 34578999999988877777777776666543221 1111 13 245677777778889999999999999998554
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH----HHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHH-HHH
Q 021469 190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM----AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV-WQC 263 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~-~qs 263 (312)
++.++.+....=|.+. .+-+|++ +...++ -.+.|++-+.+.......+.+..|++. .++=+++.. ...
T Consensus 275 ll~~a~~~~~vR~~l~--a~~~~~~----~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~G 348 (400)
T PF03825_consen 275 LLLLALVAYAVRWLLY--AYFSDPW----PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFG 348 (400)
T ss_pred HHHHHHHHHHHHHHHH--HHhcCCc----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhh
Confidence 6666666654444332 2221211 112222 346899999988888888888888655 467777665 467
Q ss_pred HHHHHHHHhhhhh
Q 021469 264 ASIAVVFFIGPYI 276 (312)
Q Consensus 264 ~g~ai~f~~~~~l 276 (312)
+|.+++..+++.+
T Consensus 349 lg~~iG~~igG~l 361 (400)
T PF03825_consen 349 LGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 8999988888865
No 90
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.1e-06 Score=83.78 Aligned_cols=159 Identities=16% Similarity=0.066 Sum_probs=95.2
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccC-Ccccc--ccchh--
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRK-EEDKG--EKETA-- 98 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~-~~~~~--~~~~~-- 98 (312)
++++|+-.|+|++..++|+++|+++++.+.+..+.......+.+|++=.+++++..++ +++||+ |++.. +++++
T Consensus 165 ~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~ 244 (495)
T KOG2533|consen 165 KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKEL 244 (495)
T ss_pred hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHH
Confidence 3689999999999999999999999999876322211223456777776666665544 566764 55321 11110
Q ss_pred ---hcc-hh-hhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHH
Q 021469 99 ---DAS-VN-FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDA 171 (312)
Q Consensus 99 ---~~~-~~-~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ 171 (312)
+.+ .+ +..+-+.+.++..+.++||++..+....+........... +...+.+...| ..+.....+.+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~-~lpl~l~~~~~~s~~~a~~ls~~~~~~g~ 323 (495)
T KOG2533|consen 245 VVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSY-WLPLYLKSNGGYSELQANLLSTPYDVGGI 323 (495)
T ss_pred HHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHH-HHHHHHHcCCCcChHHhccccchHHhhhH
Confidence 000 00 0000013456678889999998887766665544331211 11111111111 1234455567889999
Q ss_pred HHHHHHhhhhcCC
Q 021469 172 ICSLAAGRLTTGL 184 (312)
Q Consensus 172 ig~~~~G~l~d~~ 184 (312)
++.++.|.++||+
T Consensus 324 v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 324 VGLILAGYLSDRL 336 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999994
No 91
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.48 E-value=4e-05 Score=73.24 Aligned_cols=231 Identities=11% Similarity=-0.004 Sum_probs=118.4
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-C-------------------CCCchhhHHHHHHHHHHHHHHHH
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-S-------------------TSGTTLLFIVFLGVITLGTILMC 84 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-~-------------------~~~~~~~~~if~~i~~~g~~l~l 84 (312)
++++++..++....++++..+|.++...+.....+. . ....+..|.+..++.++..++..
T Consensus 125 ~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 125 ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356888899999999999999998887665321100 0 00123345444443333333333
Q ss_pred hccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhhHH-HHHHHHhhhhHhhhhhhccccccccccccc--chhhH
Q 021469 85 FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGG 161 (312)
Q Consensus 85 fL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ll-l~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~ 161 (312)
+.+.|+.+++++ + +.+.+++.+ +++++|+.++ .+..++|.|.+.+.+. ..++-......+. ...+.
T Consensus 205 ~~~~p~~~~~~~-~------~~~~~~~~~---~~~~~~~~~~~~l~~f~yvg~e~~~~s-~l~~y~~~~~~~~~~~~a~~ 273 (410)
T TIGR00885 205 LTKMPALNHSDA-K------QISFSASLS---RLARIRHYREGVIAQFFYVGVQIMCWT-FIIQYAVRLIPGMTAGFAAN 273 (410)
T ss_pred HhcCCCCCcccc-c------cccchhhHH---HHHhChhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccCCCCHHHHHH
Confidence 333343221111 0 111222222 4567777644 6678889999877652 1111110100111 11122
Q ss_pred HHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHh
Q 021469 162 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 241 (312)
Q Consensus 162 v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~ 241 (312)
.+..+..+.++|-+++|.+.||+++|+.+ .+..+......++.. +.++ .....+.++.|++-+.....+++
T Consensus 274 ~~~~~~~~~~vGR~~~~~l~~r~~~~~~l-~i~~~~~~~~~ll~~--~~~~------~~~~~~l~~~glf~s~~fp~i~s 344 (410)
T TIGR00885 274 YNIGAMVIFFISRFIGTWLISYLAAHKVL-MAYAIIGMALCLGSI--FAGG------HVGLYCLTLCSAFMSLMFPTIYG 344 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHH--HcCC------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566788999999999999766533 333333332222211 2122 12445555566655555588888
Q ss_pred HHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 242 LLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 242 i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.-+..+++...+.+..-.. .+|.++.=.+...+
T Consensus 345 l~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 345 IALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHH
Confidence 88887776654333333332 25655554444433
No 92
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.47 E-value=3.8e-05 Score=74.46 Aligned_cols=254 Identities=15% Similarity=0.057 Sum_probs=124.6
Q ss_pred cceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH
Q 021469 5 GGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 84 (312)
Q Consensus 5 qG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l 84 (312)
+.-|++|+|.+ +.||.....--.....+.++|..++.=-.-+ +++....++..-.+.+.+..++..
T Consensus 137 ~pmyl~E~sP~----------~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilG----t~~~W~~l~~~~~i~~~~~l~~l~ 202 (485)
T KOG0569|consen 137 VPMYLTEISPK----------NLRGALGTLLQIGVVIGILLGQVLGLPSLLG----TEDLWPYLLAFPLIPALLQLALLP 202 (485)
T ss_pred HHHHHhhcChh----------hhccHHHHHHHHHHHHHHHHHHHHccHHhcC----CCcchHHHHHHHHHHHHHHHHHHh
Confidence 44799999976 5777766544444444444444433211111 112234555555666677777777
Q ss_pred hccCCccc---cccch-----------------hhcchhhhhHHHH-----HHHHHHHhhcChhhHHHHHHHHhhhhHhh
Q 021469 85 FLRKEEDK---GEKET-----------------ADASVNFYSYLVS-----LSKSITTLLADVRMLLIIPLFAYSGLQQA 139 (312)
Q Consensus 85 fL~~~~~~---~~~~~-----------------~~~~~~~~~s~~~-----~~~~~~~~~~~~~~lll~p~~~~~G~~~~ 139 (312)
++|+.+|- +++|. ++.++..+..-.+ +-.+..++++|++.+.-....+..-+.+-
T Consensus 203 ~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq 282 (485)
T KOG0569|consen 203 FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQ 282 (485)
T ss_pred cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 77764431 01110 0000000000001 11135567777776554333333222222
Q ss_pred hhhh----ccccccccccccc--chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH--hcccC
Q 021469 140 FVWA----EFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSV 211 (312)
Q Consensus 140 f~~~----~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 211 (312)
|-.. .|...+..+ .|. ...-++....|+.+.+.+++...+.||.||| |+++.+..+...+.+++. .....
T Consensus 283 ~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-pLll~~~~~~~~~~~~~~~~~~l~~ 360 (485)
T KOG0569|consen 283 FSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-PLLLISLSLMAVALLLMSIALFLSN 360 (485)
T ss_pred hcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 122222111 133 3346677778889999999999999999976 566666555443322221 11111
Q ss_pred CC-CCCCchHHHHHHHHHHhhhhHHhhhhHh-HHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 212 TS-GVLGTLYPLIMAALLGIGDGVLNTQLSA-LLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 212 ~~-~~~~~~~~~~~~~l~G~~d~~~~t~~~~-i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.. ++.. +.+.+..+++.+.-++--.-+.| +.++++|. ++..|+++-...+.+...+.=..-+.
T Consensus 361 ~~~~~~~-y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~ 426 (485)
T KOG0569|consen 361 SFGSWLS-YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPP 426 (485)
T ss_pred HhhhHHH-HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111 12334444444444444344444 55667764 44567777777666665554444343
No 93
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.43 E-value=7.4e-06 Score=77.34 Aligned_cols=120 Identities=18% Similarity=0.070 Sum_probs=81.4
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHH-HHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
...+|.++.++.++..+++.+.|++.||++||+ ++..+.++.....+. .+..+..+.+..+....++..++.|++++.
T Consensus 50 ~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 128 (399)
T PRK05122 50 AFLAGLVISLQYLATLLSRPHAGRYADTLGPKK-AVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESL 128 (399)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc-hHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHh
Confidence 456899999999999999999999999999876 444554443322221 111111111101123456778899999999
Q ss_pred HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
........+.+.+| +++.++++......+.|..++-.+...+
T Consensus 129 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 129 AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 88887777777775 4446788888888888877777666543
No 94
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=1.1e-05 Score=76.64 Aligned_cols=113 Identities=18% Similarity=0.110 Sum_probs=80.9
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|+++..+.++.++++.+.|++.||++||+ ++.++.+.....+++. .+.++ ++..++...+.|.+.+..
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~ 113 (395)
T PRK10054 42 VDLIGYAMTIALTIGVVFSLGFGILADKFDKKR-YMLLAITAFASGFIAI--PLVNN-----VTLVVLFFALINCAYSVF 113 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999775 4445555444443322 12222 223444455677777777
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.........+..+++ +.+++++.+...++|.+++-.+.+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777888887654 46789999999999999988777764
No 95
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.41 E-value=1.8e-05 Score=73.80 Aligned_cols=113 Identities=18% Similarity=0.102 Sum_probs=85.8
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+++|++...+.++..+++.+.|++.||++||+ .+..+.++...+..+.. +.++ .+..++..++.|++.+..
T Consensus 39 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 39 ASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP-VLLLGLFIFALSSLGLA--LSNN-----IETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHcchhHH
Confidence 356888999999999999999999999999775 44455545444433322 2122 244667788999999999
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.+..+.++.+.+|++ +.++++.......+|..++-.+.+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 152 (385)
T TIGR00710 111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI 152 (385)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998754 46789999999999988887777654
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.41 E-value=1.9e-05 Score=77.44 Aligned_cols=138 Identities=18% Similarity=0.270 Sum_probs=87.1
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 238 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~ 238 (312)
+.+...+.........++|++.|| ++||+ .+.++.++...+..+.. +.++. ....++..++.|++.+.....
T Consensus 60 ~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~-~~~~g~~~~~ig~~l~~--~~~~~----~~~l~~~~~l~gig~g~~~~~ 132 (500)
T PRK09584 60 ITLFSSFSALVYGLVAIGGWLGDKVLGTKR-VIMLGAIVLAIGYALVA--WSGHD----AGIVYMGMATIAVGNGLFKAN 132 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHH--Hhccc----HHHHHHHHHHHHHhhhcccCC
Confidence 444444444444555688999999 58775 55566655554443322 22111 123445557789999988888
Q ss_pred hHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 239 LSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLTIQVE 304 (312)
Q Consensus 239 ~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~~~~~ 304 (312)
...++++.||+++ ..++++++...++|.+++-.+.+.+. .++.+.+..+..+++++.+....++.+
T Consensus 133 ~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~ 205 (500)
T PRK09584 133 PSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVK 205 (500)
T ss_pred HHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 8899999997543 24799999999999999988887652 233344444444566555555544333
No 97
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.41 E-value=1.3e-05 Score=76.40 Aligned_cols=113 Identities=17% Similarity=0.098 Sum_probs=85.3
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..+.|.+...+.++..+++.+.|++.||++||+ .+.++.++...+.++.. ..+...+ .+..++..++.|++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~r~l~G~~~~~~ 144 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK-SLLIIALLFVIGAILMG-LAAFALS---VEMLIVGRVLLGIGVGIA 144 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH-HHHHHHHHHHHHHHHHH-Hhccccc---hHHHHHHHHHHHhhhhHH
Confidence 456889999999999999999999999999776 44455544443333321 1111111 134677889999999999
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
....+.++++.+|++ +..+.+++....++|..++..+.
T Consensus 145 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 145 SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 998999999998754 46789999999999999999888
No 98
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.40 E-value=1.2e-05 Score=78.32 Aligned_cols=136 Identities=12% Similarity=0.162 Sum_probs=96.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+.|.++..+.++..+++.++|++.|| ++||+ .+.++.++....+.+.. +.++ ++..++..++.|++.+..
T Consensus 48 ~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~-~l~~~~~~~~~g~~~~~--~~~~-----~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 48 EQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK-TMVLGGIVLMLGHFMLA--MSIY-----PDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH-HHHHHHHHHHHHHHHHH--hccc-----HhHHHHHHHHHHhccccc
Confidence 467889999999999999999999999 78775 55566666655544332 2222 123455667789999999
Q ss_pred hhhhHhHHHHhccCC----hhhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhh
Q 021469 236 NTQLSALLGILFKHD----TEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLT 300 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~----~~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~ 300 (312)
......++++.+|++ ++.++++++...++|.+++..+.+.+. .+.-+.+..+.++++.+.+....
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999743 346899999999999999998887652 22333333344444555444433
No 99
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.36 E-value=2.1e-05 Score=76.96 Aligned_cols=135 Identities=15% Similarity=0.185 Sum_probs=89.9
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
....+...+.....+...++|++.|| +|||+ .+..+.++.......+.. .++. +.+.++.-++.|++.+...
T Consensus 51 ~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~-~~~~g~~~~~~g~~~~~~--~~~~----~~ll~~~~~l~~ig~g~~~ 123 (489)
T PRK10207 51 QAFITFGAFAALVYGLISIGGYVGDHLLGTKR-TIVLGAIVLAIGYFMTGM--SLLK----PDLIFIALGTIAVGNGLFK 123 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhccchHH-HHHHHHHHHHHHHHHHHH--hccc----hhHHHHHHHHHHhcccccc
Confidence 34555556666667777899999999 89776 556666666555443332 2221 1234455677899999999
Q ss_pred hhhHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHh
Q 021469 237 TQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 237 t~~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~ 299 (312)
.....++++.||+++ +.+++.+.+..++|.+++-.+.+.+. .++-+++..+.++++++.+...
T Consensus 124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHc
Confidence 889999999997543 45899999999999999988888763 2223333323344445555444
No 100
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.36 E-value=1.8e-05 Score=74.91 Aligned_cols=113 Identities=16% Similarity=0.059 Sum_probs=88.9
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|.+...+.++..+++.+.|++.||++||+ ++..+..+...+.+.. .+.++ ++..++..++.|++.+..
T Consensus 43 ~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~-~l~~~~~l~~~~~~~~--~~a~~-----~~~ll~~r~l~Gig~~~~ 114 (393)
T PRK09705 43 FSVAALLTALPVVTMGGLALAGSWLHQHVSERR-SVAISLLLIAVGALMR--ELYPQ-----SALLLSSALLGGVGIGII 114 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchH-HHHHHHHHHHHHHHHH--HHCcc-----hHHHHHHHHHHHhHHHHH
Confidence 346788888999999999999999999999876 5556666655554432 22233 234667789999999999
Q ss_pred hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.....++.+.+|+++..+++.+......|..++-.+.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l 155 (393)
T PRK09705 115 QAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWL 155 (393)
T ss_pred hhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987777899999988888998888887764
No 101
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.35 E-value=3.8e-05 Score=72.33 Aligned_cols=111 Identities=14% Similarity=0.053 Sum_probs=81.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+|++...+.++..+++.+.|++.||++||+ .+.++.++.....++. .+.++ ++..++..++.|++.+...
T Consensus 38 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~l~--~~~~~-----~~~l~~~r~l~G~~~~~~~ 109 (382)
T PRK10091 38 PAAGHMISYYALGVVVGAPIIALFSSRYSLKH-ILLFLVALCVIGNAMF--TLSSS-----YLMLAIGRLVSGFPHGAFF 109 (382)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHccCccHH-HHHHHHHHHHHHHHHH--HHhCc-----HHHHHHHHHHHHhhhHHHH
Confidence 46788999999999999999999999999775 5555655555444332 22222 3456777899999999888
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.....++.+.+++++ .++++.+....++|..++-.+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 110 GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 888888888887643 568888888777877776555444
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=98.34 E-value=0.0004 Score=66.88 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=70.7
Q ss_pred HHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhH
Q 021469 163 MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 242 (312)
Q Consensus 163 ~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i 242 (312)
+....++.++++.+.+++.||+++|+ .+.++.++...+.++.. +.++.+ .+..++..++.|++.+..+....++
T Consensus 270 ~~~~~~~~~~~~~l~~~l~~r~g~~~-~~~~g~~~~~i~~~~~~--~~~~~~---~~~~~~~~~l~g~G~~~~~~~~~al 343 (448)
T PRK09848 270 LVQNLVGTVASAPLVPGMVARIGKKN-TFLIGALLGTCGYLLFF--WVSVWS---LPVALVALAIASIGQGVTMTVMWAL 343 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HcCchh---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345667888999999999998765 44566655554444332 222211 2345556778899999988888888
Q ss_pred HHHhccCC--------hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 243 LGILFKHD--------TEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 243 ~g~~~~~~--------~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
..+.-|++ +..+++++.+.+.+|.+++-.+.+
T Consensus 344 ~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 344 EADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 87765422 245688999999888888765543
No 103
>PRK12382 putative transporter; Provisional
Probab=98.34 E-value=2.6e-05 Score=73.52 Aligned_cols=120 Identities=17% Similarity=0.065 Sum_probs=81.0
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
..++|.+..++.++..+++.+.|++.||++||+ ++..+.+....+.+ .......+..+..+.+..++..++.|++++.
T Consensus 50 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 128 (392)
T PRK12382 50 NTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR-SALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQ 128 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH-HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999876 44455444332211 1111111111111123467778899999998
Q ss_pred HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..+.....+.+..| |++.++++......+.|..++-.+.+.+
T Consensus 129 ~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 129 LLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88777777777776 4456789888887777777777666544
No 104
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.33 E-value=6.5e-05 Score=70.81 Aligned_cols=261 Identities=11% Similarity=0.040 Sum_probs=131.9
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHh--hHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccC-Ccccc-------cc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLIT--LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKG-------EK 95 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~--~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~-~~~~~-------~~ 95 (312)
++||+..++|-...|.|..+=.++. ..+..+.+ -+..+|.-=.+..++|.++...+++ |+.+- ++
T Consensus 149 ~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~-----w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~ 223 (448)
T COG2271 149 KERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG-----WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG 223 (448)
T ss_pred cccCceEEEehhhhhcccchHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence 5799999998888777765544444 22221111 1122332223333333333344443 43311 12
Q ss_pred chhhc-c-h--hhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhH---hhhhhhcccccccccccccchhhHHHHHHhH
Q 021469 96 ETADA-S-V--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ---QAFVWAEFTKEIVTPALGVSGVGGAMAVYGA 168 (312)
Q Consensus 96 ~~~~~-~-~--~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~---~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~ 168 (312)
|..+. + + .+..+.||.+. ...++||...++.....+.-+. .--|.-.|-... +-.+..........|=.
T Consensus 224 d~~e~~~~~~~~~~ls~~~i~~--~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~--k~~s~~~a~~a~~lfE~ 299 (448)
T COG2271 224 DPLEIYEEEKENEGLTAWQIFV--KYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV--KGFSLVKANWAISLFEV 299 (448)
T ss_pred CchhhhhhhccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence 22111 1 1 11145566653 2368888876665544332221 111222222211 11233456677788899
Q ss_pred HHHHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhccc-CCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 169 FDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 169 ~~~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
+.+.|+++.|+++||. +||.+.-++..+....+.+. .|. |+. .+.+..++.+..|+.-..=|..+-....+
T Consensus 300 agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~---~w~~~~~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e 373 (448)
T COG2271 300 AGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL---YWLAPNG---SYLLDAILLFIIGFLIYGPQMLIGLAAAE 373 (448)
T ss_pred HhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH---HHcCCCc---cHHHHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence 9999999999999985 45654433332222222221 232 221 12445666677777666666554444444
Q ss_pred hccCCh-hhhHHHHHHHHHH-HHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhhh
Q 021469 246 LFKHDT-EGAFAQLKVWQCA-SIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTI 301 (312)
Q Consensus 246 ~~~~~~-~~afa~~~~~qs~-g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~~~ 301 (312)
.-|++. ..|-+.-.++..+ |.+.+-..-+.+ ....-++++.+..+++.+.+..+-.
T Consensus 374 ~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 374 FVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred cccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 446554 4678888888888 666554443333 2234455555555555555555443
No 105
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.32 E-value=0.00091 Score=63.06 Aligned_cols=239 Identities=17% Similarity=0.141 Sum_probs=137.2
Q ss_pred cCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHH-hccCCccccccchh
Q 021469 20 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETA 98 (312)
Q Consensus 20 ~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~l-fL~~~~~~~~~~~~ 98 (312)
.|..+|++|+|-.++-|.+.-.|.++++++...++...++ ..+.-++-..+.+...+.+ -+-+.|+..++..
T Consensus 115 ~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~------~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~- 187 (403)
T PF03209_consen 115 ADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP------ERLIQVIQGVALIALLLNLIALWGQEPRRSRRA- 187 (403)
T ss_pred HhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH------HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc-
Confidence 3456789999999999999999999999998877765332 1233333333333333221 1212222211111
Q ss_pred hcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhh-hcccccccccccc--cchhhHHHHHHhHHHHHHHH
Q 021469 99 DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW-AEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSL 175 (312)
Q Consensus 99 ~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~-~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~ 175 (312)
+.+++++.++++..++.+ .||+...+.- +...+.. +|.. ...-+=|....+| ..+..-.....+.+..+|=.
T Consensus 188 ~~~~~~~~~f~~a~~~~~---~~~~a~~f~~-fl~l~t~-a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~ 262 (403)
T PF03209_consen 188 AAAERPRPPFREAWRQVW---ASPQARRFFV-FLFLGTL-AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGML 262 (403)
T ss_pred cCCCCCCccHHHHHHHHH---hCCChhHHHH-HHHHHHH-HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111223445666655444 5666544442 3333322 2221 1111112122222 23344455567777777777
Q ss_pred HHhhhhc-CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhh
Q 021469 176 AAGRLTT-GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEG 253 (312)
Q Consensus 176 ~~G~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~ 253 (312)
+.|++.. |.++++ ...+++.....++.++...-+.++ +++.....+++|++.+.+.+-.-+..-++-+ ++...
T Consensus 263 ~~g~~l~~~~~~~~-~a~~G~~~~~~~f~lii~a~~~~~----~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~ 337 (403)
T PF03209_consen 263 LAGFLLSRRLGKKR-TAALGCLLGALAFALIILAGPLGS----PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGL 337 (403)
T ss_pred HHHHHhcCCCCchH-HHHHHHHHHHHHHHHHHHHHhccc----chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhH
Confidence 8888876 444443 445666666666665433221121 2456677899999999998877766666654 45567
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh
Q 021469 254 AFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 254 afa~~~~~qs~g~ai~f~~~~~ 275 (312)
..+.+-..|+++..++-+.+..
T Consensus 338 ~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 338 FMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999888887663
No 106
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.32 E-value=2e-05 Score=75.10 Aligned_cols=116 Identities=14% Similarity=0.024 Sum_probs=80.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.++|.+...+.++..+++.+.|++.||++||+ ++..+.++....+.+... .+...+ +.+..++..++.|++.+..
T Consensus 52 ~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 52 LQVGLSVTLTGGAMFIGLMVGGVLADRYDRKK-LILLARGTCGLGFIGLALNAFLPEP---SLLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCce-EEEehHHHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999998775 333444443333322211 111111 1234566778888988888
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
......++.+..|++ ..++.++.....++|..++-.+...+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 128 VTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 788888888888654 36788888888888888888777653
No 107
>PRK03545 putative arabinose transporter; Provisional
Probab=98.32 E-value=5.1e-05 Score=71.56 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=84.6
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|++...+.++..+++...|.+.||++||+ ++..+.++...+.++.. +.++ .+..++..++.|++.+..
T Consensus 43 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~~~G~~~~~~ 114 (390)
T PRK03545 43 TAQVGLMLTIYAWVVALMSLPLMLLTSNVERRK-LLIGLFVLFIASHVLSA--LAWN-----FTVLLISRIGIAFAHAIF 114 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence 457888888999999999999999999999876 55555555444433222 2222 244666778899999988
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.+....++.+.+|+ ++.+++++.....++|.+++-.+...+
T Consensus 115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 88888899988864 556899999999999988887776643
No 108
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.30 E-value=0.00013 Score=70.33 Aligned_cols=242 Identities=17% Similarity=0.178 Sum_probs=138.9
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccch----hhcc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKET----ADAS 101 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~----~~~~ 101 (312)
+.+|...+..|.....+.++|+.++-.+....+ .+..|.+...+..+..+..+++.+..++.+.++ .+++
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~------~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~ 193 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG------PQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEE 193 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC------CeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccc
Confidence 348999999999999999999988866554332 133556666666666555655544322221111 0111
Q ss_pred hhh-hhHHHHHHHHHHHhhcChhhHHHHH-HHHhhhhHhhhhhh-cccccccccccc-----cchhhHHHHHHhHHHHHH
Q 021469 102 VNF-YSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWA-EFTKEIVTPALG-----VSGVGGAMAVYGAFDAIC 173 (312)
Q Consensus 102 ~~~-~~s~~~~~~~~~~~~~~~~~lll~p-~~~~~G~~~~f~~~-~~~~~~~s~~lg-----~~~~g~v~~~~g~~~~ig 173 (312)
.+. ....++..++.++.++.+.+...+- +.+........-.+ .+. +.++..+ ....|.+-++.+++..+|
T Consensus 194 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy--~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g 271 (433)
T PF03092_consen 194 VPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFY--FQTDALGGPHFSPSFYGTLSIVGSIASLLG 271 (433)
T ss_pred cchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEE--EEeccccccccCHHHHHHHHHHHHHHHHHH
Confidence 111 2237899999999999988754443 22222222221112 111 0112222 234566666677777788
Q ss_pred HHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh---cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469 174 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI---NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 250 (312)
Q Consensus 174 ~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~ 250 (312)
..+..+...+.+-|+ ++....++.....+.-.+ .|..+-...|.++.+.-.++..+....-..-...+++++-|+.
T Consensus 272 ~~~y~~~~~~~~~R~-~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G 350 (433)
T PF03092_consen 272 ILLYRKYFSNWSWRR-IFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKG 350 (433)
T ss_pred HHHHHHHHhCCCHHH-HHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 888877766554343 444444333322221111 1211111122244555667777777776677777888888876
Q ss_pred hh-hhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 251 TE-GAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 251 ~~-~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.| ..||+.-.+.++|..++..++..+
T Consensus 351 ~Egt~yall~s~~Nlg~~~s~~lg~~l 377 (433)
T PF03092_consen 351 SEGTVYALLASFSNLGSSVSSTLGAFL 377 (433)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 679999888888888888887754
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.30 E-value=6.6e-05 Score=76.83 Aligned_cols=109 Identities=11% Similarity=-0.015 Sum_probs=80.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+++...+.++.++|+++.|.+.||+|||+ .++++.++..++.++.. +.++ .+..++.-++.|++-+...
T Consensus 202 ~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~-~lii~lil~~i~~ll~a--fa~s-----~~~llv~R~l~G~g~g~~~ 273 (742)
T TIGR01299 202 SGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ-CLLICLSVNGFFAFFSS--FVQG-----YGFFLFCRLLSGFGIGGAI 273 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHHHHHHH
Confidence 46788888899999999999999999999876 44444444433322221 2222 2346677889999999999
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
...+.++.+.+|.+ +..+.+....+.++|..++..+.
T Consensus 274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999854 45788899999888888877654
No 110
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.29 E-value=4.8e-05 Score=72.18 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=83.2
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..++.+...+.+..++.+.+.|++.||++||+ ++..+.++.....+... +.++ ..+..++.|++++...
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~-vl~~~~~~~~~~~~~~~--~~~~--------~~~~r~l~G~~~a~~~ 106 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR-VMFIANGIKLLGCLLML--FGIH--------PLLAYGLVGIGAAAYS 106 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCch-hhHHHHHHHHHHHHHHH--HHHH--------HHHHHHHHHHHHHHHH
Confidence 45788888999999999999999999999876 55555555443322211 1112 2455678899999999
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
....+++.+.+|+++ .++.++.....++|..++-.+.+.+
T Consensus 107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998554 6899999999999988888887765
No 111
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.29 E-value=6.5e-05 Score=71.28 Aligned_cols=112 Identities=15% Similarity=0.090 Sum_probs=86.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+++|..+..+.++..+++.+.|.+.||++||+ ++..+.++.....++.. +.++ .+..++..++.|++.+...
T Consensus 55 ~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~l~G~~~g~~~ 126 (394)
T PRK10213 55 GVAGQSVTVTAFVAMFASLFITQTIQATDRRY-VVILFAVLLTLSCLLVS--FANS-----FSLLLIGRACLGLALGGFW 126 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH-HHHHHHHHHHHHHHHHH--HHCh-----HHHHHHHHHHHHHhhHHHH
Confidence 56788888899999999999999999999775 55566666554443322 2222 3457778899999999988
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|++ +..+.+......++|..++-.+.+.+
T Consensus 127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l 167 (394)
T PRK10213 127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFL 167 (394)
T ss_pred HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999754 46788888888888888887777754
No 112
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.28 E-value=3e-05 Score=76.47 Aligned_cols=176 Identities=16% Similarity=0.125 Sum_probs=108.3
Q ss_pred HHHhhcChhhHHHHHHHHhhhhHhhhhhhccccccc-ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHH
Q 021469 115 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 193 (312)
Q Consensus 115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~-s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~ 193 (312)
.+..+++|.++.+.---..+.+....+.-..+ -++ +.+-....++.+.++..+-..+.+.+.|.+.||++||+ +++.
T Consensus 3 ~~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~-wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrr-ili~ 80 (524)
T PF05977_consen 3 AFAPLRNRNFRRLWIAQLISNLGDWMQTVALA-WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRR-ILIL 80 (524)
T ss_pred CcccccCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchH-HHHH
Confidence 35567777776665555554443333211000 000 10101235778888888888999999999999999876 4444
Q ss_pred HHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHH
Q 021469 194 GAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFF 271 (312)
Q Consensus 194 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~ 271 (312)
+-++.... .++..+.+-. ..+++..+++.++.|++++..+...++++.++.|+++ .++.++.....+++..++-.
T Consensus 81 ~~~~~~~~~~~L~~l~~~~---~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPa 157 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFG---LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPA 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHhC---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccch
Confidence 44433322 2222211111 1124567889999999999999999999999998655 57888888888887777776
Q ss_pred hhhhh----hHHHHHHHHHHHHHHHHHH
Q 021469 272 IGPYI----SLQAMLIVMVVGICVALVG 295 (312)
Q Consensus 272 ~~~~l----~~~~~~~il~~~~~~~~~~ 295 (312)
+.+.+ ....-+.+..+..+++...
T Consensus 158 lgG~Lva~~G~~~~f~inalsfl~~i~~ 185 (524)
T PF05977_consen 158 LGGILVAFFGAAAAFLINALSFLISILA 185 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66643 3444455555444444433
No 113
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.27 E-value=6.3e-05 Score=70.90 Aligned_cols=111 Identities=21% Similarity=0.154 Sum_probs=81.6
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..++.+..++.++..++..+.|++.||++||+ .+.++.++......... +.++ .+..++..++.|++.+...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~i~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~ 109 (392)
T PRK10473 38 AQLHIAFSVYLAGMAAAMLFAGKIADRSGRKP-VAIPGAALFIIASLLCS--LAET-----SSLFLAGRFLQGIGAGCCY 109 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhHHHHHhCChH-HHHHHHHHHHHHHHHHH--HhCc-----HHHHHHHHHHHHhhhhHHH
Confidence 45788888899999999999999999999775 55566555544443322 2222 2345667788999999888
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
...+.++.+.+|+ ++.++.+......++|..++-.+...
T Consensus 110 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~ 149 (392)
T PRK10473 110 VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHL 149 (392)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999998864 44678888888888887776666554
No 114
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.27 E-value=5.1e-05 Score=70.49 Aligned_cols=112 Identities=17% Similarity=0.053 Sum_probs=84.1
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+++|+....+.++..+++.+.|++.||+++|+ .+.++.++...+.... ..++ ++..++..++.|++.+..
T Consensus 34 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~---~~~~-----~~~l~~~~~~~g~g~~~~ 104 (355)
T TIGR00896 34 FSVAGLLTALPVLCFAVLAPLAPWLARRFGEER-SVAAGLLLIAAGILIR---SAPG-----TALLFAGTALIGVGIAII 104 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH-HHHHHHHHHHHHHHHH---Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence 356788888999999999999999999999776 4445554443333221 2122 234567778889999888
Q ss_pred hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.....++.+.+++++..+++.+...+++|..++-.+.+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 105 NVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred hccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888887777899999999999998887766543
No 115
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.26 E-value=4.5e-05 Score=69.55 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=88.7
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..+.+.+...+.++..+++.+.|++.||++||+ .+..+.++.......... .++ .+..++..++.|++.+..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~-~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~g~~~~~~ 104 (352)
T cd06174 33 ASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR-VLLLGLLLFALGSLLLAF--ASS-----LWLLLVGRFLLGLGGGAL 104 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch-hhHHHHHHHHHHHHHHHH--hcc-----HHHHHHHHHHHHcccccc
Confidence 356788888999999999999999999999776 555666555544443221 122 245778889999999999
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
......++.+.+|+ ++..+++..+...++|..++..+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (352)
T cd06174 105 YPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL 146 (352)
T ss_pred cHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986 556899999999999999998887764
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.26 E-value=2e-05 Score=61.92 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=76.8
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
.+++++.+++.+.|++.||++||+ .+..+..+......... +.++ .+...+..++.|++.+..+...+..+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKP-VLLVGLFIFVLSTAMFA--LSSN-----ITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 467788999999999999998776 44444444443333221 2222 245667789999999999999999999
Q ss_pred HhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 245 ILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 245 ~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.+|++ +.++.+..+....+|..++-.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVL 110 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH
Confidence 988754 46789999999999999988887765
No 117
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.25 E-value=8.4e-05 Score=71.04 Aligned_cols=146 Identities=12% Similarity=0.033 Sum_probs=97.5
Q ss_pred HHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH
Q 021469 126 LIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 205 (312)
Q Consensus 126 ll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 205 (312)
.+.-.++..|+..+...-..+..-....+...+.|.+...+.++..+++...|++.||++||+ .+.++.++...+..+.
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~-~~~~g~~l~~~g~~l~ 85 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA-GILLGLFLYALGAFLF 85 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHH
Confidence 344455556665555433222111011123356899999999999999999999999999775 5556666655443332
Q ss_pred HhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 206 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
... ...+ +.+..++..++.|++.+..++..+..+....|++ +.+..++.+..+++|..++-.+.+.+
T Consensus 86 ~~~-~~~~---~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 86 WPA-AEIM---NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHH-Hhhc---cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111 1234567778889999999999888888877654 46789999999999999998876643
No 118
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.24 E-value=6.6e-05 Score=73.36 Aligned_cols=136 Identities=17% Similarity=0.209 Sum_probs=88.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
...+.++..+.....++.+++|++.||+ |||+ .+.++.++......++ ..+++. +...++...+..++.+..
T Consensus 45 ~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr-~iliG~il~~lg~lll--~~~~~~----~~~~~l~l~li~iG~G~~ 117 (493)
T PRK15462 45 NHAYELFSAYCSLVYVTPILGGFLADKVLGNRM-AVMLGALLMAIGHVVL--GASEIH----PSFLYLSLAIIVCGYGLF 117 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH-HHHHHHHHHHHHHHHH--HHhhcc----hhHHHHHHHHHHHhcccc
Confidence 4566777888888999999999999998 8776 4556666655443322 121111 122333334455666777
Q ss_pred hhhhHhHHHHhccCC---hhhhHHHHHHHHHHHHHHHHHhhhhhh--HHHH--HHHHHHHHHHHHHHHHHh
Q 021469 236 NTQLSALLGILFKHD---TEGAFAQLKVWQCASIAVVFFIGPYIS--LQAM--LIVMVVGICVALVGILFL 299 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~---~~~afa~~~~~qs~g~ai~f~~~~~l~--~~~~--~~il~~~~~~~~~~~~~~ 299 (312)
....++++++.||++ +..+++++....++|..++-.+.+.+. ..++ +.+..+..+++++.+...
T Consensus 118 ~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 118 KSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred cccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence 777888999999753 456899999999999999988887753 2233 333333445555555443
No 119
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.23 E-value=8.5e-05 Score=70.40 Aligned_cols=111 Identities=16% Similarity=0.079 Sum_probs=77.7
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..++.....+.++..+++.+.|.+.||++||+ ++.++..+...+..... +.++ .+..++..++.|++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~ 119 (406)
T PRK15402 48 EWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP-VMLAGVAFFILTCLAIL--LAQS-----IEQFTLLRFLQGIGLCFIG 119 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHhHhhhHH
Confidence 46788888999999999999999999999876 44555544444433222 2222 2345677888899999888
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
...+..+.+.+|+++ .++.+.......+|..++-.+...
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 159 (406)
T PRK15402 120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA 159 (406)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887655 456777766666666665555443
No 120
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.22 E-value=9.3e-05 Score=71.06 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=81.5
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+|++...+.++.++++.+.|++.||+++|+ ++.++.++...+..+. .+.++ ++..++..++.|++.+...
T Consensus 58 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~g~~~g~~~ 129 (434)
T PRK11663 58 SDIGLLATLFYITYGVSKFVSGIVSDRSNARY-FMGIGLIATGIINILF--GFSSS-----LWAFALLWVLNAFFQGWGW 129 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch-hHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHHHHHHccc
Confidence 46788889999999999999999999999775 4455555544433322 12222 2334555667788888777
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+++ ++..+++++...+++|..++-.+.+.+
T Consensus 130 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 130 PVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888998875 457889999999999999887665543
No 121
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.21 E-value=3e-05 Score=71.59 Aligned_cols=107 Identities=12% Similarity=-0.043 Sum_probs=78.7
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|.+...+.++..+++.+.|++.||++||+ .+.++.++.....+... ..++ .+..++..++.|++.+..
T Consensus 37 ~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~ 108 (377)
T TIGR00890 37 VTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRA-VAMLGGILYGLGFTFYA--IADS-----LAALYLTYGLASAGVGIA 108 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccc-hhHHhHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHhHHHHHH
Confidence 356788999999999999999999999999876 44455555444433221 2222 234566777899999887
Q ss_pred hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHH
Q 021469 236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVF 270 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f 270 (312)
.......+.+.+|+++..+.++.....++|..++-
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 143 (377)
T TIGR00890 109 YGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILS 143 (377)
T ss_pred HHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHH
Confidence 77777788888888877889999888888876543
No 122
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.21 E-value=4e-05 Score=72.08 Aligned_cols=113 Identities=12% Similarity=-0.027 Sum_probs=84.1
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
...+|.++..+.++..+++.+.|++.||++||+ .+..+.++......+. .+.++ .+..++..++.|++.+..
T Consensus 40 ~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G~~~~~~ 111 (381)
T PRK03633 40 TWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR-SYYLASLIFAAGCAGL--GLMVG-----FWSWLAWRFVAGIGCAMI 111 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999998765 4445555554443332 22222 244567788999999888
Q ss_pred hhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.......+.+..+ +++.++++.+....++|.+++-.+.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 112 WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777666666665 4456899999999999999988887764
No 123
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.21 E-value=5e-05 Score=81.42 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=84.4
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+.+..++.++.++++.+.|++.||++||+ +++++.++..+..++... ...++ .+..++..++.|++.+...
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~-~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNR-VIRIVKLFEVGLTLLIVLAYYLGW-----FWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHhhc
Confidence 3577778888899999999999999999775 444444433322222111 11111 2457778899999999999
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 277 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~ 277 (312)
...++++.+.++++ ...++++.....++|..++..+.+.+.
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999754 468999999999999999988887653
No 124
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.21 E-value=1.5e-05 Score=75.35 Aligned_cols=119 Identities=10% Similarity=0.120 Sum_probs=73.1
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
...+|.++..+.++..+++.+.|++.||++||+.+. .+.+....... .....+.+...........+..++.|++.+.
T Consensus 37 ~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 115 (396)
T TIGR00882 37 KTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL-WIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSA 115 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356889999999999999999999999999876443 22222221111 1111111110000011234446777887777
Q ss_pred HhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 235 LNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..........+.-++ +...++..|...++|.+++-.+.+.+
T Consensus 116 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~g~~~~g~l 156 (396)
T TIGR00882 116 GAGAIEAYIEKVSRN-SNFEYGKARMFGCVGWALCASIAGIL 156 (396)
T ss_pred chhhHHHHHHHhhhh-cccccchhhhhcccHHHHHHHHHhhh
Confidence 666666555443222 23478899999999999988887754
No 125
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.21 E-value=6.2e-05 Score=70.25 Aligned_cols=112 Identities=15% Similarity=0.174 Sum_probs=84.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
.+++++...+.++..+++.+.|++.||++||+ .+..+.++......... +.++ .+...+..++.|++.+...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~i~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~ 97 (377)
T PRK11102 26 GSVQMTLSAYILGFAIGQLFYGPMADSFGRKP-VILGGTLVFALAAVACA--LAQT-----IDQLIYMRFLHGLAAAAAS 97 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHhhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHHHHHHHH
Confidence 56788888999999999999999999999765 55555555544433222 2222 2346677889999999988
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|++ +.+++++......+|..++-.+...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 98 VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999988754 46789999888888888877776654
No 126
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.20 E-value=0.00048 Score=67.10 Aligned_cols=247 Identities=13% Similarity=0.072 Sum_probs=130.1
Q ss_pred eechhhHHHHHHHHhHhhhhHHhhHhhcCC------CCcCC---CCchhhHHHHHHHHHHHHHHH-HhccCCccccccch
Q 021469 28 IGSFNGEFWGMFASHQFVGNLITLAVLKDD------KGGST---SGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKET 97 (312)
Q Consensus 28 ~g~~~gifw~i~~~s~iiG~li~~~~~~~~------~~~~~---~~~~~~~~if~~i~~~g~~l~-lfL~~~~~~~~~~~ 97 (312)
.++.++++-...++|.++|+++..+..... ++... ...+..|.+=.++.++...+. ++.++.+..+++|.
T Consensus 150 ~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 150 TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 467888888888999999998876642110 00000 012334433333333333333 33443221111110
Q ss_pred --hh----cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhh-hhccc-ccc-c-cc---cc---ccchhhH
Q 021469 98 --AD----ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV-WAEFT-KEI-V-TP---AL---GVSGVGG 161 (312)
Q Consensus 98 --~~----~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~-~~~~~-~~~-~-s~---~l---g~~~~g~ 161 (312)
++ .+.+....++|.+++..++=+.-+.+++.=++-+.|++--.. .+++- +.+ . .+ .. |...-.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~ 309 (477)
T TIGR01301 230 INSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAF 309 (477)
T ss_pred hhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHH
Confidence 00 011112234444444444444445566666666667642222 11110 000 0 00 00 1111235
Q ss_pred HHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hc-cc----C-CCCC---CCc----hHHHHHHHH
Q 021469 162 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-IN-YS----V-TSGV---LGT----LYPLIMAAL 227 (312)
Q Consensus 162 v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~----~-~~~~---~~~----~~~~~~~~l 227 (312)
.+.++++...+.+++.-++.+|+++|+....++.++...++...+ +. ++ + ++++ .++ +..+++..+
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 667788888888888888888887544344455444444444332 22 11 1 1110 111 457889999
Q ss_pred HHhhhhHHhhhhHhHHHHhccC---ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 228 LGIGDGVLNTQLSALLGILFKH---DTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 228 ~G~~d~~~~t~~~~i~g~~~~~---~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.|+.-+..++..|+++++.-++ +.....+++|..-.+.+-+.-...+
T Consensus 390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g 439 (477)
T TIGR01301 390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSG 439 (477)
T ss_pred hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998773 2246788888888877777665444
No 127
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.20 E-value=7.9e-05 Score=70.84 Aligned_cols=113 Identities=14% Similarity=0.214 Sum_probs=87.1
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
...+|+++.++.+...+.+.+.|++.||++||+ ++..+.++......... +.++ ++..++..+++|++.+..
T Consensus 45 ~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~g~~~~~~ 116 (400)
T PRK11646 45 AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP-MIVTGMLMRAAGFATMA--IAHE-----PWLLWLSCILSGLGGTLF 116 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence 356888998899999999999999999999765 55556655555444332 2222 345677788999999888
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+....+++.+.+|+ ++.++.++.+...++|..++-.+.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l 158 (400)
T PRK11646 117 DPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL 158 (400)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889888864 456899999999999999998887765
No 128
>PRK10133 L-fucose transporter; Provisional
Probab=98.20 E-value=0.00015 Score=69.96 Aligned_cols=113 Identities=12% Similarity=0.049 Sum_probs=84.4
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
..+.|..+..+.++..+++.+.|++.||++||+ ++..+.++...+.++... ...++ .+..++.-++.|++.+.
T Consensus 60 ~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~-~l~~g~~~~~~~~~l~~~~~~a~~-----~~~ll~~r~l~G~g~g~ 133 (438)
T PRK10133 60 NFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA-GIITGLFLYALGAALFWPAAEIMN-----YTLFLVGLFIIAAGLGC 133 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999875 555666666555433211 12222 23456778888999999
Q ss_pred HhhhhHhHHHHhccCChh-hhHHHHHHHHHHHHHHHHHhhh
Q 021469 235 LNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~~~-~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.++..+.++.+..++++. ...+.++...++|.+++-.+.+
T Consensus 134 ~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 134 LETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988876555443 3588999999999999987754
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.19 E-value=7.1e-05 Score=71.46 Aligned_cols=113 Identities=14% Similarity=0.149 Sum_probs=85.9
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|.+...+.++..++++..|++.||++||+ ++..+.++......+. .+.++ ++..++.-++.|++.+..
T Consensus 42 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~l~G~~~~~~ 113 (412)
T TIGR02332 42 ATMFGLAATLFYAAYVICGIPSNIMLAIIGARR-WIAGIMVLWGIASTAT--MFATG-----PESLYLLRILVGIAEAGF 113 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHHHHhhH
Confidence 456889999999999999999999999999776 5455555554443332 22222 234667788999999998
Q ss_pred hhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
......++.+.+|++ +..+.+++....++|..++..+.+.+
T Consensus 114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889989854 56899999999999999888876643
No 130
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.18 E-value=0.00012 Score=68.51 Aligned_cols=112 Identities=11% Similarity=-0.048 Sum_probs=83.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
.++|++...+.++..+++.+.|.+.||++||+ .+.++.++...+.++.. +.++ ++..++..++.|++.+...
T Consensus 47 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~ 118 (405)
T TIGR00891 47 VDAASLISAALISRWFGALMFGLWGDRYGRRL-PMVTSIVLFSAGTLACG--FAPG-----YITMFIARLVIGIGMGGEY 118 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHhhhhhhh
Confidence 56788888999999999999999999999876 44455555444333222 2122 2446778899999999988
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|++ +..+.++......+|..++-.+...+
T Consensus 119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888754 46789999998888888887776653
No 131
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.18 E-value=0.00011 Score=70.92 Aligned_cols=230 Identities=13% Similarity=0.020 Sum_probs=134.3
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccc----ccc-----
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEK----- 95 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~----~~~----- 95 (312)
+++|+|.+|++-+...+|.++|+++.-.+... + .. ....+..+=++..+++.++++|||.|++. +++
T Consensus 145 ~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~-g--Wr-~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~ 220 (511)
T TIGR00806 145 PSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTL-G--WI-SYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGA 220 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--ch-hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccc
Confidence 46899999999999999999999887664322 1 11 12334444456688889999999977662 010
Q ss_pred ---c-hhhcch--------hh---hhHHHHHHHHHHHhhcChhhHHHHHH--HHhhhh------Hhhhhhhccccccccc
Q 021469 96 ---E-TADASV--------NF---YSYLVSLSKSITTLLADVRMLLIIPL--FAYSGL------QQAFVWAEFTKEIVTP 152 (312)
Q Consensus 96 ---~-~~~~~~--------~~---~~s~~~~~~~~~~~~~~~~~lll~p~--~~~~G~------~~~f~~~~~~~~~~s~ 152 (312)
| ++..+. ++ ...+++..++.....+||+.+.-..- +-..|+ .|..|..+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~----- 295 (511)
T TIGR00806 221 LPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDES----- 295 (511)
T ss_pred cccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCC-----
Confidence 0 000000 00 01123344444556777776443311 112232 22233222221
Q ss_pred ccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469 153 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 232 (312)
Q Consensus 153 ~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d 232 (312)
..++.|.+-+..-+..++.++..|++-.++. +.-...++.+..+-+-++....+.++ -|++|+.+++++...
T Consensus 296 --~~~yNG~veA~~tllga~~a~~ag~~~~~w~-~~~~l~l~v~s~~~~gll~~m~~t~~-----Iw~~Y~~yvlf~~~y 367 (511)
T TIGR00806 296 --LNKYNGAVDAASTLLGAITSFIAGFVNIRWA-RWSKLLIAVVSAIQAGLVFWMSQSHD-----IWVLYVTYVLFRGIY 367 (511)
T ss_pred --ccccCCHHHHHHHHHHHHHHHHHHhhcCCch-hhHHHHHHHHHHHHHHHhhhhhcccc-----hHHHHHHHHHHHHHH
Confidence 1126788888888888999999999855443 21122222222221212222234333 377999999999999
Q ss_pred hHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHH
Q 021469 233 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFF 271 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~ 271 (312)
....|...+-++.--.+++ .-.|++..++--+=+++...
T Consensus 368 ~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 368 QFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred HHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 9999999998888766555 66788888875555555443
No 132
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.16 E-value=3.7e-05 Score=71.15 Aligned_cols=112 Identities=11% Similarity=0.028 Sum_probs=85.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+|++...+.++..+++.+.|++.||++||+ .+.++.++......+.. +.++ .+..++..++.|++.+...
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~g~~~~~~~ 100 (399)
T TIGR00893 29 AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK-TLAVFIVIWGVFTGLQA--FAGA-----YVSLYILRVLLGAAEAPFF 100 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce-eeHHHHHHHHHHHHHHH--HHcC-----HHHHHHHHHHHHHHHHhhh
Confidence 46788899999999999999999999999776 43445444433322221 2222 2456778899999999999
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+....++.+.+|++ +..+++......++|..++..+...+
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 99999999999754 46789999999999999988777653
No 133
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.16 E-value=0.00049 Score=65.53 Aligned_cols=157 Identities=10% Similarity=0.118 Sum_probs=96.9
Q ss_pred HHHHHHHhhcChhhHHHHHHHH-----hhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469 111 LSKSITTLLADVRMLLIIPLFA-----YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 185 (312)
Q Consensus 111 ~~~~~~~~~~~~~~lll~p~~~-----~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~ 185 (312)
.+|+..+++|+|+...++-+.. |..+.|.|. .-++.-+.+...|.+..|++-..--+.|++.=.+..++.+|+|
T Consensus 209 ~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~-~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 209 SLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFP-IYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3577889999999966665333 333333221 1122222233345566788888888889998899999999998
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHH-HHHHHH
Q 021469 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQ-LKVWQC 263 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~-~~~~qs 263 (312)
.|+.++ ++..+...=+. ...+.++ ++...++=.+.|+--++.....--.+...+|++- +....+ +.+...
T Consensus 288 ~k~~Ll-lag~i~~iRi~--~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 288 AKNLLL-LAGVIMAIRII--GSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHH-HHHHHHHHHHH--HHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred hHhHHH-HHHHHHHHHHH--HHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence 776444 34333222222 2233333 3567778888898888888888888989897655 345554 466677
Q ss_pred HHHHHHHHhhhhh
Q 021469 264 ASIAVVFFIGPYI 276 (312)
Q Consensus 264 ~g~ai~f~~~~~l 276 (312)
+|..+.....+.+
T Consensus 360 ~~~~i~s~~~G~l 372 (412)
T PF01306_consen 360 IGIIILSPLAGYL 372 (412)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhh
Confidence 7777766666654
No 134
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.13 E-value=0.00014 Score=68.68 Aligned_cols=112 Identities=19% Similarity=-0.002 Sum_probs=84.7
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+++|++...+.++.++++.+.|++.||++||+ .+..+.++...+.++.. +.++ .+..++..++.|++.+..
T Consensus 49 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~G~~~~~~ 120 (406)
T PRK11551 49 VAQMGWAFSAGILGLLPGALLGGRLADRIGRKR-ILIVSVALFGLFSLATA--QAWD-----FPSLLVARLLTGVGLGGA 120 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-hHHHHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHhhHHHH
Confidence 356889999999999999999999999999876 44455544443333221 2222 245677888999999998
Q ss_pred hhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 236 NTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 236 ~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
......++.+.+|+ ++..++++......+|..++..+...
T Consensus 121 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 161 (406)
T PRK11551 121 LPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL 161 (406)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999964 55788999999999998888777654
No 135
>TIGR00895 2A0115 benzoate transport.
Probab=98.13 E-value=3.9e-05 Score=71.53 Aligned_cols=112 Identities=19% Similarity=0.088 Sum_probs=84.6
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+|++...+.++..+++.+.|++.||++||+ .+..+.++...+..+.. ..++ .+..++..++.|++.+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~ 123 (398)
T TIGR00895 52 VQLGFLFSAGLIGMAFGALFFGPLADRIGRKR-VLLWSILLFSVFTLLCA--LATN-----VTQLLILRFLAGLGLGGLM 123 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH-HHHHHHHHHHHHHHHHH--Hccc-----hHHHHHHHHHHhcccccch
Confidence 46788888899999999999999999998765 44555555444433322 2222 2346677889999999888
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|++ +..++++......+|..++-.+.+.+
T Consensus 124 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 124 PNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred hhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 99999999998754 46789999999999999888777654
No 136
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.12 E-value=0.0011 Score=63.91 Aligned_cols=158 Identities=15% Similarity=0.085 Sum_probs=99.4
Q ss_pred HHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccc--hhhHHHHHHhHHHHHHHHHHhhhhcCCCC
Q 021469 110 SLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPS 186 (312)
Q Consensus 110 ~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~--~~g~v~~~~g~~~~ig~~~~G~l~d~~~~ 186 (312)
..+++.+. +++||..+++.-.++..........+...- +.+-.+|.. ...+.+..++.+.+++..+..+|.+|+++
T Consensus 223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~y-y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gk 301 (467)
T COG2211 223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVY-YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGK 301 (467)
T ss_pred ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhhe-eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhch
Confidence 34444444 577888766666666655554444443111 111123322 34456667777778889999999999997
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-------CCh-hhhHHHH
Q 021469 187 ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------HDT-EGAFAQL 258 (312)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-------~~~-~~afa~~ 258 (312)
|+ ++.++.++.+++....+ .++++. ..+.++...+.+++.+..+....+++++.-+ .++ .-.++..
T Consensus 302 k~-~~~~~~~~~~i~~~~~~-f~~~~~----~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 302 KK-LFLIGLLLLAVGYLLLY-FTPAGS----VVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HH-HHHHHHHHHHHHHHHHH-hhcCcc----hHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 65 66777777776666544 444331 2456777788889999988888888877532 122 2467877
Q ss_pred HHHHHHHHHHHHHhhh
Q 021469 259 KVWQCASIAVVFFIGP 274 (312)
Q Consensus 259 ~~~qs~g~ai~f~~~~ 274 (312)
-+++=+|.+++-++.+
T Consensus 376 tF~~K~g~ala~~~~g 391 (467)
T COG2211 376 TFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777765544
No 137
>PRK10504 putative transporter; Provisional
Probab=98.11 E-value=0.00011 Score=70.93 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=81.2
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+.+...+.++.+++..+.|++.||++||+ ++..+.++...+.++. ...++ .+...+..++.|++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~g~~~~~~~ 116 (471)
T PRK10504 45 LHMHMVIVSYVLTVAVMLPASGWLADRVGVRN-IFFTAIVLFTLGSLFC--ALSGT-----LNELLLARVLQGVGGAMMV 116 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHH--HHhCC-----HHHHHHHHHHHHhhhHHHH
Confidence 35677778888899999999999999999776 4444444443333322 12222 2345677889999999988
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|+++ ..++++.+...++|..++-.+.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 117 PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 888888888887543 5688999999898888887776643
No 138
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.10 E-value=0.0002 Score=69.71 Aligned_cols=117 Identities=13% Similarity=0.082 Sum_probs=79.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhc----CCCChhhHHHHHHHHHHHHHHHHHhcccCCC--------CCCC-c---hH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSVTS--------GVLG-T---LY 220 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~---~~ 220 (312)
...+.+..+..+...+...+.|.++| |+|||++.+..+.+....++.++. +.++. +... . +.
T Consensus 39 ~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~--~~~~~~~~~~~~~~~~~~~~~i~~ 116 (477)
T TIGR01301 39 AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG--FAADIGHLFGDNLDKKTKPRAIIV 116 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH--hCchhhhhccccccccchhHHHHH
Confidence 46788888999999999999999999 489888776555555544444332 21110 0000 1 11
Q ss_pred HHHHHHHHHhhhhHHhhhhHhHHHHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 221 PLIMAALLGIGDGVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 221 ~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
..+...++.++-...|.-.-+++++..|++. +.+++....+.++|..+++.+...
T Consensus 117 ~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 117 FVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222334455666666777789999998654 358999999999999999987764
No 139
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.09 E-value=9.8e-05 Score=71.36 Aligned_cols=112 Identities=18% Similarity=0.106 Sum_probs=85.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..++++...+.++.+++..+.|++.||++||+ .+.++.++......+. ...++ .+...+..++.|++.+...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~~G~~~~~~~ 108 (485)
T TIGR00711 37 SQVQWVITSYMLANAISIPLTGWLAKRFGTRR-LFLISTFAFTLGSLLC--GVAPN-----LELMIIFRVIQGFGGGPLI 108 (485)
T ss_pred hhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH-HHHHHHHHHHHHHHHH--hCcCC-----HHHHHHHHHHHHhhhhhHH
Confidence 46788999999999999999999999999776 4455555544443322 22222 2346677889999999999
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
...+.++.+.+|+ ++..+++++.....+|..++-.+.+.+
T Consensus 109 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 109 PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI 149 (485)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh
Confidence 9999999999874 446789999999888888887776654
No 140
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.07 E-value=0.00011 Score=78.87 Aligned_cols=112 Identities=19% Similarity=0.075 Sum_probs=82.8
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH--HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS--GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.++.+.+++.+..++.+.+.|.+.||++||+.+.. .+.+.......+.+ ..++ .+..++..++.|++.+.+
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~--~~~s-----~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGF--HLNS-----VPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHHHHhh
Confidence 46777888999999999999999999997753211 11111111111111 1122 345788899999999999
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
....++++.+.++++. ..+.++.....++|..++-.+.+.+
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987654 6899999999999999999888865
No 141
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=3.4e-05 Score=72.17 Aligned_cols=229 Identities=20% Similarity=0.209 Sum_probs=140.7
Q ss_pred CCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCccccccchhhcc
Q 021469 22 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADAS 101 (312)
Q Consensus 22 ~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~ 101 (312)
+++|+.||+..|+-.++-.+|.++|.-+.-++...... +.=|+++.++..+-..+-+++-+|.+.+++..
T Consensus 188 f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk------~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~---- 257 (464)
T KOG3764|consen 188 FPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK------SAPFLVLAIVLLLDGALQLLVIEPTEMDPDST---- 257 (464)
T ss_pred cccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC------cCcHHHHHHHHHHHHHHHHheeCccccCcccc----
Confidence 45677899999999999999999999888777654332 23488888888888888777656544333210
Q ss_pred hhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc-cc-hhhHHHHHHhHHHHHHHHHHhh
Q 021469 102 VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VS-GVGGAMAVYGAFDAICSLAAGR 179 (312)
Q Consensus 102 ~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg-~~-~~g~v~~~~g~~~~ig~~~~G~ 179 (312)
++=+.++++++||++++..-....++...+|.-=.++. +..+.+. .+ ++|.+..-.++.-.+|..+.|+
T Consensus 258 --------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlsl-wm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~ 328 (464)
T KOG3764|consen 258 --------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSL-WMLETMFTPGWEVGLAFLPASLSYAIGTNLFGK 328 (464)
T ss_pred --------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHH-HHHHhccCCCcceeeeecccccchhccCchHHH
Confidence 11134788999999999998888999888887322111 0011111 01 2344444456677899999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCch-HHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhh---hH
Q 021469 180 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL-YPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG---AF 255 (312)
Q Consensus 180 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~---af 255 (312)
+.||++..+++...+.++..+... . ..|....+.+.+ .-+.+.+.-|..|+..-. +++.+-+.+++. .+
T Consensus 329 la~k~~~~~wl~~~~gl~~~G~~~--~-~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P----~l~~lvd~rh~s~~~vY 401 (464)
T KOG3764|consen 329 LADKYPHLRWLLSLGGLATVGVSS--G-PIPFATSIAQLWVPNFGLGFGIGLADASLIP----TLGYLVDPRHVSGFNVY 401 (464)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHh--c-hhHhhhhHHHHhhhhHHHHHHHHHHHHHHhh----hhHHhcchhhcccccee
Confidence 999997433454433333332111 1 122111111111 134455555666655433 444444333333 77
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 021469 256 AQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 256 a~~~~~qs~g~ai~f~~~~~l 276 (312)
+....++-++.+++|.++|.+
T Consensus 402 GsVyaIad~a~sla~a~GP~~ 422 (464)
T KOG3764|consen 402 GSVYAIADAAFSLAYAIGPTF 422 (464)
T ss_pred eeHHHHHHHHHHHhhhccccc
Confidence 777788888999999998854
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.06 E-value=0.00035 Score=68.39 Aligned_cols=130 Identities=16% Similarity=0.123 Sum_probs=90.6
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+.++++...|.++...+....|++.||++||+ ++..+.++.....++.. ..++ .+..++.-++.|++.+...
T Consensus 41 ~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~-~l~~~~~~~~~~~~~~~--~a~~-----~~~li~~r~l~G~g~~~~~ 112 (495)
T PRK14995 41 NELLWIIDIYSLVMAGMVLPMGALGDRIGFKR-LLMLGGTLFGLASLAAA--FSPT-----ASWLIATRALLAIGAAMIV 112 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH--HcCC-----HHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999999999775 55556555544433322 2222 2345666789999999988
Q ss_pred hhhHhHHHHhccC--ChhhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHH
Q 021469 237 TQLSALLGILFKH--DTEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALV 294 (312)
Q Consensus 237 t~~~~i~g~~~~~--~~~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~ 294 (312)
.....++...+++ ++..+++++.....+|.+++-.+.+.+ ..++-+++...+.++..+
T Consensus 113 ~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~ 176 (495)
T PRK14995 113 PATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMG 176 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Confidence 8777778777743 345789999999999988888877654 345555555444444433
No 143
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.06 E-value=0.00036 Score=64.80 Aligned_cols=114 Identities=10% Similarity=-0.019 Sum_probs=74.3
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|+++.++.+..++.+.+.|++.||++||++++..+.++......+. .+.++ ++..++..++.|.+.+..
T Consensus 32 ~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~~g~~~~~~ 104 (375)
T TIGR00899 32 PAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF--AWNRN-----YFLLLVLGVLLSSFASTA 104 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH--Hhcch-----HHHHHHHHHHHHhhhhhh
Confidence 35789999999999999999999999999877655444444433332221 22222 233445567777777766
Q ss_pred hhhhHhHHHHhccCChh-hh--HHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDTE-GA--FAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~-~a--fa~~~~~qs~g~ai~f~~~~~l 276 (312)
......+..+..|++.. .+ .+..+...++|.+++-.+...+
T Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 148 (375)
T TIGR00899 105 NPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL 148 (375)
T ss_pred HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH
Confidence 66666666665554332 22 5677777888888887776654
No 144
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.05 E-value=9.7e-05 Score=74.62 Aligned_cols=160 Identities=15% Similarity=0.104 Sum_probs=83.9
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCC----------cC-CCCc-----hhhHHHHHHHHHHHHHHHHhccC
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG----------GS-TSGT-----TLLFIVFLGVITLGTILMCFLRK 88 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~----------~~-~~~~-----~~~~~if~~i~~~g~~l~lfL~~ 88 (312)
+++++++.|++.....+|.++|.++...+.....+ .+ ++.+ +..|.+..++.++..+.++++|+
T Consensus 203 ~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 203 SKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred ccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 36899999999999999999999887766532110 00 0111 23355555555555544555554
Q ss_pred Ccccc----ccc--hhh---c-ch----hhhhHHHHHHHHHHHhhcChhhHHHHHHHHh-hhhHhhhhhhcccccccccc
Q 021469 89 EEDKG----EKE--TAD---A-SV----NFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPA 153 (312)
Q Consensus 89 ~~~~~----~~~--~~~---~-~~----~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~-~G~~~~f~~~~~~~~~~s~~ 153 (312)
..+++ +.+ +++ . +. +.....++..+...++++||..+........ .+...++.. -.| .+....
T Consensus 283 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~lP-~yl~~~ 360 (633)
T TIGR00805 283 ALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT-FLP-KYLENQ 360 (633)
T ss_pred ccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHH
Confidence 21111 100 000 0 00 0001233444556678999987555443322 222222221 111 121222
Q ss_pred ccc--chhhHHHHHHhH-HHHHHHHHHhhhhcCCCC
Q 021469 154 LGV--SGVGGAMAVYGA-FDAICSLAAGRLTTGLPS 186 (312)
Q Consensus 154 lg~--~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~ 186 (312)
.|. ...++++....+ +.++|.++.|++.||++.
T Consensus 361 ~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 361 YGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred cCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 232 456666666665 467899999999998863
No 145
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.05 E-value=4e-05 Score=73.06 Aligned_cols=157 Identities=13% Similarity=0.129 Sum_probs=81.7
Q ss_pred HhhcChhhHHHHHHHHhhhhHhhhhhhcccccccc-cccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHH
Q 021469 117 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA 195 (312)
Q Consensus 117 ~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s-~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~ 195 (312)
..++||+...+.-.++...+..++.....+.-+.+ ..++..++|.+...++++.++++.+.|++.||++||+.+. ++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~-~~~ 83 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLL-WII 83 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH-HHH
Confidence 34567777665544444444334444433322222 1223457899999999999999999999999999876443 222
Q ss_pred HHHHHHHHHHHh-cccCCCCCCCchH-HHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhh
Q 021469 196 IAQVVVFLWILI-NYSVTSGVLGTLY-PLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
..........+. .+.+.-. ....+ .++..+..|.+-.........+.. .++++...+++..+.+.++|.+++-.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQ-YNILLGAIVGGIYLGFGFLAGAGAIEAYIE-RVSRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhccchhhhhhHHH-HHHhhccccchhhHHhhhHHHHHHHHHH
Confidence 221111111110 1110000 00011 222334444433222222333322 2233334477888888899999988887
Q ss_pred hhh
Q 021469 274 PYI 276 (312)
Q Consensus 274 ~~l 276 (312)
+.+
T Consensus 162 g~l 164 (420)
T PRK09528 162 GIL 164 (420)
T ss_pred HHH
Confidence 765
No 146
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.04 E-value=0.00037 Score=65.68 Aligned_cols=112 Identities=20% Similarity=0.176 Sum_probs=75.3
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
...++.++..+.++.++++.+.|++.||++||+ .+..+.++...+..... ..++ .+..++..++.|++.+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~~~g~~~~~~ 113 (394)
T PRK11652 42 EGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP-VILVGMSIFILGTLVAL--FAHS-----LTVLIAASAIQGLGTGVG 113 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHHH--HHcc-----HHHHHHHHHHHHhhhhHH
Confidence 356788889999999999999999999999876 44455544443332221 2222 234566778889888877
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
......+..+.+++++ ..+.+.......++..++-.+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 154 (394)
T PRK11652 114 GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL 154 (394)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777776433 456677666666666555555443
No 147
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.03 E-value=0.00043 Score=66.16 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=80.5
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+..+.....+.++..++.++.|.+.||++||+ ++..+..+...+.++.. ..++ .+..++.-++.|++.+...
T Consensus 51 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~--~a~~-----~~~l~~~r~l~Gi~~~~~~ 122 (413)
T PRK15403 51 SLAPASVSLYLAGGMALQWLLGPLSDRIGRRP-VLITGALIFTLACAATL--FTTS-----MTQFLIARFIQGTSICFIA 122 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH-HHHHHHHHHHHHHHHHH--HcCC-----HHHHHHHHHHHHHHHHHHH
Confidence 34566777888899999999999999999876 55555555444433322 2222 2345667788899888777
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
...+.++.+.+++++ .++.+.+.....+|..++-.++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 123 TVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777778888887654 5788998888888888887777654
No 148
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.01 E-value=0.00027 Score=65.49 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=80.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..++++...+.++.++++.+.|++.||++||+ .+.++.++......+... .+++ ++..++..++.|++.+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~~~~~-~~~~-----~~~~~~~~~~~g~~~~~~- 108 (366)
T TIGR00886 37 AQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY-TTTLSLLLLAIPCLWAGL-AVQS-----YSVLLLLRLFIGIAGGSF- 108 (366)
T ss_pred HHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHHH-Hhhh-----HHHHHHHHHHHHHhchhh-
Confidence 46788888999999999999999999999776 445565555544433221 1112 234566778889887765
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++++.+|+ ++..+.+++....++|..++..+.+.+
T Consensus 109 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 109 ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4456788888864 456788999988889998888777643
No 149
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.99 E-value=0.00085 Score=63.27 Aligned_cols=219 Identities=12% Similarity=0.055 Sum_probs=107.3
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHh-ccC-Cccccccchhhcch
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRK-EEDKGEKETADASV 102 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lf-L~~-~~~~~~~~~~~~~~ 102 (312)
++++|...||+- .-|+|..+-.++.-.+...... +..+..-.++....++..+.+.+ ..+ |+. |.+.
T Consensus 135 ~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~---~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~--r~~~----- 203 (417)
T COG2223 135 KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF---LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH--RASV----- 203 (417)
T ss_pred hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--hccc-----
Confidence 468899999887 6666665555444333221110 01233444555555555555433 332 321 1110
Q ss_pred hhhhHHH-HHHHHHHHhhcChhhHHHHHH-HHhhhhHhhhhhhccccccccccccc--chhhHHHHHHhHHHHHHHHHHh
Q 021469 103 NFYSYLV-SLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAG 178 (312)
Q Consensus 103 ~~~~s~~-~~~~~~~~~~~~~~~lll~p~-~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G 178 (312)
++.+ +++|. +.++|+...+.-+ +.-.|-+.+|-.. ++.-+ .+..|. ...|...+++.+...+.=..+|
T Consensus 204 ---~~~~~~~~~~---v~~~~~~W~lsllY~~tFG~Fvgfs~~-l~~~~-~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG 275 (417)
T COG2223 204 ---KPQLPAQLKA---VFSNKDTWLLSLLYFATFGGFVGFSAY-LPMYL-VTQFGLSPVTAGLIAFLFPLIGALARPLGG 275 (417)
T ss_pred ---cccchhHHHH---HhcCcchHHHHHHHHHHHHHHHHHHHH-HHHHH-HHhcCCChhhHHHHHHHHHHHHHHHHhccc
Confidence 0111 33433 3445555333321 2223333333221 22111 111232 2345666777777777778999
Q ss_pred hhhcCCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCCCc-hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHH
Q 021469 179 RLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLGT-LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFA 256 (312)
Q Consensus 179 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa 256 (312)
.|+||+++++.+...-....+...++ .+++ .....++ ..++...+.++++-+.-|-..|.++-..|+++...+-+
T Consensus 276 ~LsDR~Gg~rv~~~~f~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G 352 (417)
T COG2223 276 WLSDRIGGRRVTLAVFVGMALAAALL---SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTG 352 (417)
T ss_pred hhhhhccchhHHHHHHHHHHHHHHHH---HccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHH
Confidence 99999987664433333232333322 2222 2111122 23444455666666666677788888888876655555
Q ss_pred HHHHHHHHH
Q 021469 257 QLKVWQCAS 265 (312)
Q Consensus 257 ~~~~~qs~g 265 (312)
+.-..-++|
T Consensus 353 ~vga~G~lG 361 (417)
T COG2223 353 IVGAIGGLG 361 (417)
T ss_pred HHHHhcccc
Confidence 555554444
No 150
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.98 E-value=0.0053 Score=60.32 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=71.8
Q ss_pred HHHHHHhHHHHHHHHHH----hhhhcCCCChhhHHHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 161 GAMAVYGAFDAICSLAA----GRLTTGLPSITFIVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~----G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
....+.++..++.+.+. +++.||.+.+ ..+.+|.++...++..+.. .+..+.....+++....++++|+++.+
T Consensus 320 ~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~-~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 320 QYQALNPFWIMIGSPILAAIYNKMGDRLPMP-HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 34444554444454444 5555554432 2456777777767665432 222221222235678889999999999
Q ss_pred HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469 235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.....++++.++.|++ +.++++.+-+..++|..++-.+.
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 46889988877777777664443
No 151
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.0013 Score=61.83 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=139.0
Q ss_pred cccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHh-hHhhcCCCC-cCC-----------CCchhhH
Q 021469 3 WRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT-LAVLKDDKG-GST-----------SGTTLLF 69 (312)
Q Consensus 3 ~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~-~~~~~~~~~-~~~-----------~~~~~~~ 69 (312)
|+-+.|++.+.++ ++..+-.++--+++.+|.++|.++. +++++...+ .+. ...+..|
T Consensus 123 taaNp~v~~lg~~----------~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 123 TAANPYVTLLGKP----------ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred hccchHHHHhCCc----------hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 3455677777654 3556677888899999999999775 444532110 000 1123456
Q ss_pred HHHHHHHHHHHHHHHhccCCccccccchhhcchhhhhHHHHHHHHHHHhhcChhh-HHHHHHHHhhhhHhhhhhhccccc
Q 021469 70 IVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRM-LLIIPLFAYSGLQQAFVWAEFTKE 148 (312)
Q Consensus 70 ~if~~i~~~g~~l~lfL~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-lll~p~~~~~G~~~~f~~~~~~~~ 148 (312)
.++...-.+=.+.....+.|+.++.++++. + +++. ...+++++|+. +-.+-.|+|.|.|.+.++=. .+
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~-~--~~~~------~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl-~~- 261 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPSLG-A--SGSA------GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL-VS- 261 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCccccccc-c--cccc------hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH-HH-
Confidence 555554444444444455455443322110 0 1110 24456777776 45666899999999987421 11
Q ss_pred cccccccc--chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHH
Q 021469 149 IVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAA 226 (312)
Q Consensus 149 ~~s~~lg~--~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (312)
+..+..|. ....+.+..+..+-++|=+++..+.+|++..+.+...+.+..+.+....+. ++ .+.....+
T Consensus 262 y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~---~g------~v~~~~l~ 332 (422)
T COG0738 262 YLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI---GG------VVALYALF 332 (422)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh---cC------hHHHHHHH
Confidence 11222232 345666777787888888787788788764444543333333333332221 11 24667777
Q ss_pred HHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 227 LLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 227 l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.|+..+.....++++--+-.+++.+ .-+..-..-.+|.++.=.+.+.+
T Consensus 333 ~ig~F~simfPTIfslal~~l~~~ts-~~s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 333 LIGLFNSIMFPTIFSLALKNLGEHTS-VGSGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHHHhHHHHHHHHHHHHhccCcccc-ccceeeeeheecchHHHHHHHHH
Confidence 88888888888888877777775554 44444455556667666665554
No 152
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.96 E-value=0.0003 Score=66.87 Aligned_cols=111 Identities=10% Similarity=-0.112 Sum_probs=81.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
.+.+++..++.++..+++.+.|.+.||++||+ .+.++.++......... +.++ .+..++..++.|++.+...
T Consensus 53 ~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~l~~~r~l~G~g~g~~~ 124 (426)
T PRK12307 53 MEGAFLATAAFIGRPFGGALFGLLADKFGRKP-LMMWSIVAYSVGTGLSG--LASG-----VIMLTLSRFIVGMGMAGEY 124 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH--HHhH-----HHHHHHHHHHHHHHHhhHH
Confidence 45788888899999999999999999999775 54555555444333221 2122 2456777889999999888
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.....++.+.+|++ +..+.++.....++|..++-.+.+.
T Consensus 125 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 125 ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 88888999988755 4678888888888888877665543
No 153
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.95 E-value=0.0004 Score=65.92 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=75.3
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
...+|.++..++++..+++.+.|++.||++||+ .+..+..+...+.... ....... + ++..++..++.|++-+.
T Consensus 47 ~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~-~l~~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~~~i~G~g~~~ 121 (402)
T TIGR00897 47 PQQSASAFTLYGIAAAISAWISGVVAEIIGPLK-TMMIGLLLWCVGHAAFIVFGLGHA-N---YPLILLFYGIRGLGYPL 121 (402)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHhccCc-c---HHHHHHHHHHHHcchHH
Confidence 457899999999999999999999999999876 4445555544433221 1111111 1 23345667778888776
Q ss_pred HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHH-HHHHhhh
Q 021469 235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIA-VVFFIGP 274 (312)
Q Consensus 235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~a-i~f~~~~ 274 (312)
........+.+.+| +++.++.+++....++|.. ++-.+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~ 163 (402)
T TIGR00897 122 FAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSS 163 (402)
T ss_pred HHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555666665 4557899999998888863 4544443
No 154
>PRK03699 putative transporter; Provisional
Probab=97.95 E-value=0.00049 Score=65.08 Aligned_cols=110 Identities=13% Similarity=0.091 Sum_probs=75.6
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.++++.+...+.++..+++++.|++.||++||+ .+..+.++......+.. +.++ ++...+..++.|++.+..
T Consensus 41 ~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~l~~--~~~~-----~~~~~~~~~l~G~~~g~~ 112 (394)
T PRK03699 41 VSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR-QLIFGFALMILAVAGLM--FSHS-----LALFSIAMFVLGVVSGIT 112 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHH--Hcch-----HHHHHHHHHHHHHhhHhh
Confidence 356788888899999999999999999999776 44455544443333222 2222 234567778889999888
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.+....++.+.+|+++ ..+.+......++|..++-.+.
T Consensus 113 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred ccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889887643 4566666666666655554443
No 155
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.94 E-value=0.0012 Score=64.14 Aligned_cols=147 Identities=8% Similarity=-0.004 Sum_probs=91.0
Q ss_pred hHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-H
Q 021469 124 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-V 200 (312)
Q Consensus 124 ~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~ 200 (312)
.+.+.-+.+..+|..=+..+.....+....+| .++.+....+..++..++.+..|.+.||+|.|+.. .++.++.. .
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~-~~~~ll~~i~ 113 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT-VFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHH
Confidence 34444444555555444444322222221233 34678888888889999999999999999977644 33333322 2
Q ss_pred HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 201 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.+...+..-.+.+ +++..+++.+++|++-+ ........+...||++ +..+.+++...-++|..++..+.+.
T Consensus 114 ~~~~~~a~~~~~~---s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 114 CVWLGIAVQNPNT---PFGIFIVIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHcccCC---CHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2222211000111 13457888999999844 5566677888889865 5689999988888888887777664
No 156
>PRK11043 putative transporter; Provisional
Probab=97.93 E-value=0.00068 Score=64.04 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=77.6
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+++|.+...+.++..+++.+.|++.||++||+ ++..+..+......+. .+.++ .+..++..++.|++.+..
T Consensus 40 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G~~~~~~ 111 (401)
T PRK11043 40 ASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP-VLLAGLSLFALGSLGM--LWVES-----AAQLLVLRFVQAVGVCSA 111 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHhhhHHH
Confidence 456888999999999999999999999999776 5455554444333322 22222 234556677888887776
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
......++.+.+++++ ..+++.......+|.+++-.+...+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 153 (401)
T PRK11043 112 AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL 153 (401)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666678888887654 4677777777777777776665543
No 157
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.93 E-value=0.00081 Score=64.92 Aligned_cols=109 Identities=12% Similarity=0.073 Sum_probs=72.9
Q ss_pred ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
..+..|.++..+.++.++++.+.|++.||+++|+ ++.++.++..............+.+ .+..++..++.|++.+.
T Consensus 61 s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~-~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~l~gi~~g~ 136 (452)
T PRK11273 61 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWFQGM 136 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch-hHHHHHHHHHHHHHHHHhhhccccc---HHHHHHHHHHHHHHHhc
Confidence 3467888999999999999999999999999876 4455554444333222111001111 23456667888888887
Q ss_pred HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHH
Q 021469 235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIA 267 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~a 267 (312)
.......++.+.+|++ +..+.++++...++|.+
T Consensus 137 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 137 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 6665666777777654 46788888888777753
No 158
>TIGR00898 2A0119 cation transport protein.
Probab=97.92 E-value=0.0003 Score=68.60 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=82.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+.+..++.++..+++.+.|++.||+|||+ ++.++.++..++.+.. .+.++ .+..++..++.|++.+...
T Consensus 127 ~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~-~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~r~l~G~~~~~~~ 198 (505)
T TIGR00898 127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKK-VLLLSTLVTAVSGVLT--AFSPN-----YTVFLVFRLLVGMGIGGIW 198 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhccchH-HHHHHHHHHHHHHHHH--HHccc-----HHHHHHHHHHHHhhccchH
Confidence 35788899999999999999999999999876 4445555544333222 22222 3456778889999999999
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|++ +..+.++.....++|..++-.+...+
T Consensus 199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999765 45677777777777777766665443
No 159
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.92 E-value=0.00028 Score=67.34 Aligned_cols=114 Identities=19% Similarity=0.153 Sum_probs=79.3
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~ 231 (312)
..+|.++....+..++...+.|.+.|| +|||++.+..+.+.......+++ +.|+.+... ..+.++..++++.+
T Consensus 35 ~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 112 (437)
T TIGR00792 35 AFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF--TTPDFSATGKLVYAYITYILLGLF 112 (437)
T ss_pred HHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence 567899999999999999999999997 56667777677666655544333 333321111 13456677888999
Q ss_pred hhHHhhhhHhHHHHhccCCh--hhhHHHHHHHHHHHHHHHHHh
Q 021469 232 DGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~qs~g~ai~f~~ 272 (312)
.++.++-..++..+..+|++ .+..+.......+|..++..+
T Consensus 113 ~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~ 155 (437)
T TIGR00792 113 YSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVI 155 (437)
T ss_pred HHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777788888775544 456777777777877666554
No 160
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00047 Score=67.76 Aligned_cols=151 Identities=20% Similarity=0.281 Sum_probs=101.2
Q ss_pred HHhhcChhhHHHH--HHHHhhhhHhhhhh-hcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCC-hhhHH
Q 021469 116 TTLLADVRMLLII--PLFAYSGLQQAFVW-AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIV 191 (312)
Q Consensus 116 ~~~~~~~~~lll~--p~~~~~G~~~~f~~-~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~-~~~~~ 191 (312)
+++++||.++++. ..+.+.|+...+.. ..|.... -...+...+++.+.|+.+++|=++.|.+.|+... +..+.
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~---g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~ 368 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL---GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLF 368 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHH
Confidence 5788888775544 34445555544442 2233222 1123567888899999999999999999998652 34445
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHH
Q 021469 192 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF 270 (312)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f 270 (312)
.++.+.+..+..+ .|...+ ++......+++|++.+.+......++.++.+.++ ..++++..++++++.-++=
T Consensus 369 ~~~ll~~gl~~~~----~p~~~~---~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 369 LLTLLIAGLARLF----LPFATT---YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred HHHHHHHHHHHHH----HHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 5555444433322 222211 2457888999999999999999988888886444 7899999999999888776
Q ss_pred Hhhhhh
Q 021469 271 FIGPYI 276 (312)
Q Consensus 271 ~~~~~l 276 (312)
-+...+
T Consensus 442 Piag~~ 447 (509)
T KOG2504|consen 442 PIAGLL 447 (509)
T ss_pred ccceee
Confidence 665543
No 161
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.91 E-value=0.0013 Score=64.38 Aligned_cols=155 Identities=8% Similarity=-0.010 Sum_probs=96.8
Q ss_pred HHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhh
Q 021469 115 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITF 189 (312)
Q Consensus 115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~ 189 (312)
..+..++||...+.-+.+.+|...+...+..+.-+-..-...+.+|+.. ..+.. .++.++.|.+.||+ |||++
T Consensus 5 ~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 5 YLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchH
Confidence 3466678888877778888888777665543332211112234566642 12222 26889999999998 87765
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHH
Q 021469 190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAV 268 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai 268 (312)
.+.++.+....+..++. ..+|.. +.++..+..++.|++.+.......++..+.+|+ ++..+.++......+|..+
T Consensus 83 ~ll~~~i~~~~~~~~~a-~~~~~~---~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 83 WLLATQLLLLVAIAAMG-FLEPGT---QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred HHHHHHHHHHHHHHHHH-HcCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 55555555544433332 222221 123456677788888888888888899998874 4456778877777777777
Q ss_pred HHHhhhh
Q 021469 269 VFFIGPY 275 (312)
Q Consensus 269 ~f~~~~~ 275 (312)
+-.....
T Consensus 159 g~~l~~~ 165 (491)
T PRK11010 159 SGGLALW 165 (491)
T ss_pred HHHHHHH
Confidence 7655444
No 162
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.001 Score=64.62 Aligned_cols=263 Identities=12% Similarity=0.005 Sum_probs=134.4
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc--cCCcccccc---chhhc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL--RKEEDKGEK---ETADA 100 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL--~~~~~~~~~---~~~~~ 100 (312)
++|+++.++..+..|+|.+++..++-.+-.. .- .....|-++.+++++=.++.+++ ++|++...- |.+..
T Consensus 160 ~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s-~~----GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I 234 (466)
T KOG2532|consen 160 NERSTFIAILTAGSQLGTIITMPVSGLLCES-SL----GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYI 234 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-CC----CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHH
Confidence 6899999999999999999999777666543 11 13456667776666666554333 445553321 10000
Q ss_pred chhhhh-HHHH-HHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHH
Q 021469 101 SVNFYS-YLVS-LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 101 ~~~~~~-s~~~-~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~ 176 (312)
+..+.. ..++ .--.-.++++|+.++......+-..+..-+... |...|.++.++ +++.|+.-++=-+...+..++
T Consensus 235 ~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~-y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~ 313 (466)
T KOG2532|consen 235 EKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT-YLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFV 313 (466)
T ss_pred HhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHH
Confidence 000000 0000 001133467888887777655544443333333 33344454444 457788888778888999999
Q ss_pred HhhhhcCCCC-------hhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHh-cc
Q 021469 177 AGRLTTGLPS-------ITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FK 248 (312)
Q Consensus 177 ~G~l~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~-~~ 248 (312)
.|.+.||..+ ++.++-..... ..+..++.+.+-++++ .+.-++....+.+-...+..-....+.+ .|
T Consensus 314 ~g~lsD~l~~~~ls~t~~rkifn~i~~~-~~ai~l~~l~~~~~~~----~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap 388 (466)
T KOG2532|consen 314 AGQLSDRLTFRILSETTVRKIFNTIAFG-GPAVFLLVLAFTSDEH----RLLAVILLTIAIGLSGFNISGFYKNHQDIAP 388 (466)
T ss_pred HHHHHHHHhhccCchHhHHHHHHhHHHH-HHHHHHHeeeecCCCc----chHHHHHHHHHHHHcccchhhhHhhhhhccc
Confidence 9999997533 12232211111 1111222223333321 1122222222233333333333344444 44
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHhhhhhh-----HHHH--HHHHHHHHHHHHHHHHHh
Q 021469 249 HDTEGAFAQLKVWQCASIAVVFFIGPYIS-----LQAM--LIVMVVGICVALVGILFL 299 (312)
Q Consensus 249 ~~~~~afa~~~~~qs~g~ai~f~~~~~l~-----~~~~--~~il~~~~~~~~~~~~~~ 299 (312)
......+++.++.-++...++=.+-+.+. .+|+ +.+..++++++.+.|.+.
T Consensus 389 q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 389 QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 44445666666665555544444433321 2444 444446667777666655
No 163
>PRK11462 putative transporter; Provisional
Probab=97.89 E-value=0.00076 Score=65.51 Aligned_cols=114 Identities=23% Similarity=0.167 Sum_probs=81.7
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~ 231 (312)
..+|.++.+.-+-.++.-.+.|.++|| +|||+|-++++.+.....+.+++ ++|+.+... ..++++.+.++..+
T Consensus 45 ~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf--~~p~~s~~~~~~y~~~~~~~~~~~ 122 (460)
T PRK11462 45 GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAY--STPDLSMNGKMIYAAITYTLLTLL 122 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence 356777877888899999999999995 56777777777777666655443 344322111 23577888999999
Q ss_pred hhHHhhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHHHHh
Q 021469 232 DGVLNTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~f~~ 272 (312)
..+.+.--.++..++.+|.+| +..+......++|..++..+
T Consensus 123 ~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 123 YTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred HHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988999998887665 46777777777776555444
No 164
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.86 E-value=0.00092 Score=62.97 Aligned_cols=109 Identities=19% Similarity=0.186 Sum_probs=74.5
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 238 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~ 238 (312)
+|.++.++.+...+++.+.|++.||++||+ .+..+.++......+.. +.++ .+..++..++.|++.+.. ..
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~-~~ 126 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKI-MLLRSALGMGIVMVLMG--LAQN-----IWQFLILRALLGLLGGFV-PN 126 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHH-HHHHHHHHHHHHHHHHH--HHhh-----HHHHHHHHHHHHHhhhhH-Hh
Confidence 578888899999999999999999999776 44455554444433221 2122 234566677788876553 44
Q ss_pred hHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 239 LSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 239 ~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
....+.+.+++ ++..+.+.......+|..++..+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 127 ANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677764 345788888888888888887776654
No 165
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.86 E-value=0.00053 Score=66.25 Aligned_cols=116 Identities=14% Similarity=-0.007 Sum_probs=81.2
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-c---ccC-CCCCCCchHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-N---YSV-TSGVLGTLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~l~G~~ 231 (312)
...+++...+.++..+++++.|++.||+|||+ .+.++.++...+.+.... . .+. +.+.......++.-++.|++
T Consensus 55 ~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~-~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~ 133 (479)
T PRK10077 55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRD-SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIG 133 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhh
Confidence 45688888999999999999999999999876 444555444333222111 1 110 11100012345677999999
Q ss_pred hhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469 232 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.+........++++.+|++ +..++++......+|..++...+
T Consensus 134 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~ 176 (479)
T PRK10077 134 VGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVN 176 (479)
T ss_pred HhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854 46789998888888888876654
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.86 E-value=7e-05 Score=69.18 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=80.6
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+|++...+.++..+++++.|++.||++||+ .+.++.++...+.++.. +.++ .+..++..++.|++.+...
T Consensus 30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~ 101 (379)
T TIGR00881 30 TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV-FLPIGLILCAIVNLFFG--FSTS-----LWVMAALWALNGIFQGMGW 101 (379)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee-hhHHHHHHHHHHHHHHH--Hhhh-----HHHHHHHHHHHHhhccccC
Confidence 46788889999999999999999999999775 54556555544433322 2122 2456778888999999988
Q ss_pred hhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHH
Q 021469 237 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 270 (312)
Q Consensus 237 t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f 270 (312)
...+.++.+.+|++ +..++++......+|..++-
T Consensus 102 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 102 PPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred CchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence 99999999999754 45788888888888888776
No 167
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.84 E-value=0.00046 Score=67.05 Aligned_cols=112 Identities=9% Similarity=-0.084 Sum_probs=82.8
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...+.++..+.++.++++++.|.+.||++||+ .+..+.++...+.+... +.++ .+..++..++.|++.+...
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~--~~~~-----~~~l~~~~~l~G~~~~~~~ 126 (496)
T PRK03893 55 VQAASLISAAFISRWFGGLLLGAMGDRYGRRL-AMVISIVLFSVGTLACG--FAPG-----YWTLFIARLVIGMGMAGEY 126 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--HHhH-----HHHHHHHHHHHHHHHHHHH
Confidence 45778888899999999999999999999775 44455544444433222 2222 2456778889999999988
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+++++ ..++++.....++|..++-.+...+
T Consensus 127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999887544 5788898888888888887766643
No 168
>PTZ00207 hypothetical protein; Provisional
Probab=97.82 E-value=0.0015 Score=65.23 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=74.5
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
+++.+... +..-..+.+..|++.||+|+|. ++.++.++..+.+++..+.....- ....+..++..++.|++.+..++
T Consensus 63 ~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~-vllig~ll~~iG~ll~ala~~~~i-~~s~~~l~l~r~l~G~G~~~~~~ 139 (591)
T PTZ00207 63 DLSTITTV-GIAVGYFLLPYSFIYDYLGPRP-IFVLSMTVFCLGTLLFALTFQEVI-EGSVVRLSVYNGLMTLGCMLFDL 139 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHhcccc-cCcHHHHHHHHHHHHHHHHHHHH
Confidence 34444432 3333445667899999999775 666777776666554432211100 00123456677789999999888
Q ss_pred hhHhHHHHhccCChhhhHHHHHHHHHHHHHH
Q 021469 238 QLSALLGILFKHDTEGAFAQLKVWQCASIAV 268 (312)
Q Consensus 238 ~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai 268 (312)
.....+.+.||+++..+.++.+....+|.++
T Consensus 140 ~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 140 GAVVTVLSVFPSNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHhChhhhHHHHHHHHHHHHHHHHH
Confidence 8888899999988888999999999999986
No 169
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.81 E-value=0.00032 Score=68.04 Aligned_cols=113 Identities=9% Similarity=-0.090 Sum_probs=80.0
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHh--cccCCCCCCCchHHHHHHHHHHhhh
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILI--NYSVTSGVLGTLYPLIMAALLGIGD 232 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d 232 (312)
..+.|++...+.++..++..+.|.+.||+++|+ ++.++.++... .+..... ...++ .+..++.-++.|++.
T Consensus 63 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~ 136 (467)
T PRK09556 63 TTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ-FLPFLLILSAICMLGFGASLGSGSVS-----LGLMIALWALSGFFQ 136 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc-hHHHHHHHHHHHHHHHHHHHhcccch-----HHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999776 33333333221 2221111 11121 234566777889998
Q ss_pred hHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 233 GVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+........++.+.+|++ +..+++++....++|.+++-.+..
T Consensus 137 ~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 137 STGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred hccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 887788888999999754 467889998888889888876654
No 170
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.81 E-value=0.00086 Score=65.22 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=79.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~ 231 (312)
..+|.++...-+..++...+.|.++|| +|||+|.++.+.+.....+.+++ ++|+.+... ..+.++.+.+++++
T Consensus 42 ~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf--~~p~~~~~~~~~~~~~~~~l~~~~ 119 (473)
T PRK10429 42 GLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF--SAHLFEGTAQYVFVCVTYILWGMT 119 (473)
T ss_pred HHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH--cCCCCCccHHHHHHHHHHHHHHHH
Confidence 467888888889999999999999994 57777777777777666654443 334321111 13466778889999
Q ss_pred hhHHhhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHH
Q 021469 232 DGVLNTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVV 269 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~ 269 (312)
..+.++--.++..++.+|.+| +.++.-+.+.++|..+.
T Consensus 120 ~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 120 YTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998866554 44666577777764444
No 171
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.80 E-value=0.00084 Score=65.74 Aligned_cols=116 Identities=11% Similarity=-0.066 Sum_probs=83.2
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
..+.+...+.++.++++++.|++.||+|||+ .+.++.++..++.++.... +...+....+..++.-++.|++-+....
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~-~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKR-VYGMELIIMIIATVASGLS-PGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHc-cCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 4577788899999999999999999999875 4445555554443332211 1111111113467788899999999999
Q ss_pred hhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 238 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 238 ~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
....++.+.+|.+. ..+.++......+|..++..+...
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998544 678999999999988887766543
No 172
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.77 E-value=0.0018 Score=62.20 Aligned_cols=114 Identities=9% Similarity=0.047 Sum_probs=77.3
Q ss_pred ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
+.++.|..+..+.++..+++.+.|++.||++||+ .+..+.++...+..... ..+...+ +....++..++.|++.+.
T Consensus 59 s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~~~l~g~~~g~ 134 (438)
T TIGR00712 59 SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILSAAVMLLMG-FVPWATS--SIAIMFVLLFLNGWFQGM 134 (438)
T ss_pred CHhHhHHHHHHHHHHHHHhhhccchhhhccCCce-ehHHHHHHHHHHHHHHh-ccccccc--hHHHHHHHHHHHHHHhhc
Confidence 3456888999999999999999999999999776 44455545444433221 1111000 112344556778888887
Q ss_pred HhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHh
Q 021469 235 LNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~ 272 (312)
........+.+.+|+ ++..+++++....++|..++-.+
T Consensus 135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l 173 (438)
T TIGR00712 135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL 173 (438)
T ss_pred chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence 767677778888865 45679999999888887776544
No 173
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.75 E-value=0.00087 Score=63.78 Aligned_cols=265 Identities=16% Similarity=0.081 Sum_probs=126.2
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-H--hc--cCCccc-cccchhh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-C--FL--RKEEDK-GEKETAD 99 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-l--fL--~~~~~~-~~~~~~~ 99 (312)
+.|.....+=-...++|-.+|+++.-.+..+.++ ++...+.++..+..+.+++.+++ + +. ++|..+ +....+.
T Consensus 172 ~qra~A~~~~v~~n~LGvavg~llppilV~~~~~-~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~ 250 (480)
T KOG2563|consen 172 DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD-SEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL 250 (480)
T ss_pred chhhhhhhHHHhcchHHHHHHhhccceecCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh
Confidence 4455566665566678888888888766554422 22333445445555566655443 2 21 112111 1111111
Q ss_pred cchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccc-cccccccc--hhhHHHHHHhHHHHHHHHH
Q 021469 100 ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPALGVS--GVGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 100 ~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~-~s~~lg~~--~~g~v~~~~g~~~~ig~~~ 176 (312)
...+ -.+++.++++|++..+++-. | |...+-.++.++-.- .-|.-|.+ ..|+.-+..-++.++++++
T Consensus 251 ----~~~~---f~~si~~~~~n~~F~il~~~--y-gi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~ 320 (480)
T KOG2563|consen 251 ----QDAS---FPKSIKSCFKNRQFIILAIC--Y-GIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALA 320 (480)
T ss_pred ----hcCc---HHHHHHHHHcCccHHHHHHH--H-hhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHH
Confidence 1111 34667789999998766533 2 222222222222110 00111333 3455555555667999999
Q ss_pred HhhhhcCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHh-ccCChhhh
Q 021469 177 AGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FKHDTEGA 254 (312)
Q Consensus 177 ~G~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~-~~~~~~~a 254 (312)
+|.+.||.++.+....+..... ..+ .+++..+. + ..+.++.|....++|++-......-..+-.+. ||..++.-
T Consensus 321 ~gii~Dktk~fk~~~~v~~~~~-~v~~~~l~~~t~-~--~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tS 396 (480)
T KOG2563|consen 321 SGIIADKTKKFKLTTLVLYLFA-LVGTLMLLTCTL-F--LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTS 396 (480)
T ss_pred HHhhhhhhhhHHHHHHHHHHHH-HHHHHHHHHhhc-c--CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCccc
Confidence 9999999764322222211111 111 11111111 1 11234577778888887655433323232222 56555444
Q ss_pred HHHHH-HHHHHHHHHHHHhhhhhh-------HH--HHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469 255 FAQLK-VWQCASIAVVFFIGPYIS-------LQ--AMLIVMVVGICVALVGILFLTIQVEK 305 (312)
Q Consensus 255 fa~~~-~~qs~g~ai~f~~~~~l~-------~~--~~~~il~~~~~~~~~~~~~~~~~~~~ 305 (312)
.++.+ +-|..|.+..+....... .. ........++...++.+..=++|..|
T Consensus 397 sGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~ 457 (480)
T KOG2563|consen 397 SGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLR 457 (480)
T ss_pred ceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHh
Confidence 44333 345556666666654331 11 11222334555555555555555443
No 174
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.75 E-value=0.0025 Score=60.37 Aligned_cols=138 Identities=11% Similarity=-0.066 Sum_probs=82.4
Q ss_pred HHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhhHHHHHHHHHHHHHHHH
Q 021469 131 FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWI 205 (312)
Q Consensus 131 ~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~~~~~~~~~~~~~~~~~ 205 (312)
.+-.|+-.+|..+..|.-+-+.-+..+++|.+....-. .+...+.|.+.||+ +||++.+.++.+....+...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 34455555555543332222222334577777554443 68889999999998 666655555555554444433
Q ss_pred HhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 206 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.. .+++.+ .+..+++.++.+++.+..+....+++.+..|++ +..+.++...-.++|..++-.+..
T Consensus 86 ~~-~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~ 151 (402)
T PRK11902 86 AF-CPPHAA---LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL 151 (402)
T ss_pred Hh-cCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH
Confidence 32 222211 233566667788888888888888999988765 456677766656666666555443
No 175
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.74 E-value=0.00027 Score=68.37 Aligned_cols=114 Identities=9% Similarity=-0.008 Sum_probs=84.0
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...|.++..+.++.++++++.|++.||+++|+ .+..+.++......+......++ ....++..++.|++.+...
T Consensus 76 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 76 ALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW-SIGIGMFLSSVISIVIPWAAGGG-----IALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred HHhhHHHHHHHHHHHHHHcchHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHcC-----chHHHHHHHHHHHhcccch
Confidence 45678888899999999999999999999776 44444444332222211111111 2346778899999999999
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.+.+|+ ++..+.++......+|..++..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l 190 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL 190 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 456889999998999999888877654
No 176
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.71 E-value=9.8e-06 Score=76.97 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=90.8
Q ss_pred ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
+.++.|++-..+-+..++++.+.|+|.||++|++ ++.+|..+...+-+..- +.. +.|...++=.+-|+|.+.
T Consensus 66 ~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-v~~vG~~iW~~Av~~~~--fs~-----~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 66 SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR-VIAVGIFIWTLAVFASG--FSN-----HFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred CchhccchhHHHHHHHHHHHHHHHHHHhhcCcce-EEeeHHHHHHHHHHHHH--HHH-----HHHHHHHHHHHhccchhh
Confidence 4456778888899999999999999999998764 66667666554433221 111 135577889999999999
Q ss_pred HhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 235 LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..+..+.++++.||+++ .+.++++++.-..|+.++|.++..+
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 99999999999998654 7899999999999999999988864
No 177
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.71 E-value=0.0035 Score=62.53 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=88.4
Q ss_pred HHhhcChhh-HHHHHHHHhhhhHhhhhh-hcccccc----cccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh
Q 021469 116 TTLLADVRM-LLIIPLFAYSGLQQAFVW-AEFTKEI----VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF 189 (312)
Q Consensus 116 ~~~~~~~~~-lll~p~~~~~G~~~~f~~-~~~~~~~----~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~ 189 (312)
.++++|+|. -..+...+..|+.. |.. ..+|+.. .++..+....++....++++..+|+.+.|.+..++++-++
T Consensus 303 ~~Lf~~~r~~~~~lvi~fi~G~~~-~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw 381 (599)
T PF06609_consen 303 HRLFKDRRGFAALLVISFISGMNF-FSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW 381 (599)
T ss_pred HHHhccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH
Confidence 468888664 33333444455431 111 2334332 2333233346677778899999999999998877765455
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHH
Q 021469 190 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAV 268 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai 268 (312)
.++++.++.......+. ...++.. .. .....++-|++-+........+.....|++. ..+.++.-.+.++|.++
T Consensus 382 ~li~~~~~~ta~~Gama-~~~~~n~--~~--~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 382 QLIFGSVLMTAFCGAMA-AVRPDNK--NA--AIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred HHHHHHHHHHHHHHHHH-HccCCCc--ch--HHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence 65566655543323222 2333321 12 3344556666666655555555444456544 67899999999999999
Q ss_pred HHHhhh
Q 021469 269 VFFIGP 274 (312)
Q Consensus 269 ~f~~~~ 274 (312)
++.+..
T Consensus 457 g~aIy~ 462 (599)
T PF06609_consen 457 GYAIYN 462 (599)
T ss_pred HHHHHH
Confidence 988754
No 178
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.70 E-value=0.0015 Score=63.63 Aligned_cols=110 Identities=11% Similarity=0.024 Sum_probs=73.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
.+.+.+...+.++..++.++.|.+.||++||+ .+..+.++.....++. .+.++ ++..++..++.|++.+.+.
T Consensus 71 ~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~-~~~~~~~~~~~~~~~~--~~~~s-----~~~l~~~r~l~G~~~~~~~ 142 (476)
T PLN00028 71 SDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY-GSAFLLMLTAPAVFCM--SLVSS-----ATGFIAVRFFIGFSLATFV 142 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHHHHHHHhhH
Confidence 45677777888889999999999999999876 4344444443333222 12222 2335566788888887654
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
. ....+++.+|+ ++..+.++......+|..++..+.+.
T Consensus 143 ~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~ 181 (476)
T PLN00028 143 S-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL 181 (476)
T ss_pred H-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 44467788875 45678999988888888877665553
No 179
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.69 E-value=0.0017 Score=61.14 Aligned_cols=111 Identities=7% Similarity=0.017 Sum_probs=75.6
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhh---HHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF---IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 232 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d 232 (312)
...+|.++.++.+...+++.+.|++.||++|+.. .+.++..+ . .+.+....++ .+..++..++.|++.
T Consensus 38 ~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~--~~~~~~~~~~-----~~~l~i~~~l~g~~~ 108 (382)
T PRK11128 38 PETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--F--AVAFWFGAHS-----FWLLFVAIGLFNLFF 108 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--H--HHHHHHhccc-----HHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999986421 22111111 1 1111112111 244566777788888
Q ss_pred hHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+..+....++... ++++++++++..|...++|.+++-.+...+
T Consensus 109 ~~~~~~~~a~~~~-~~~~~~~a~~~~~~~~~lg~~igp~lgg~l 151 (382)
T PRK11128 109 SPLVPLTDALANT-WQKQIGLDYGKVRLWGSIAFVIGSALTGKL 151 (382)
T ss_pred cccccHHHHHHHH-HHhhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 8777776666554 455566789999999999988888887765
No 180
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.67 E-value=0.00022 Score=66.82 Aligned_cols=134 Identities=15% Similarity=0.164 Sum_probs=97.2
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-HHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.++|.+.+++.+.|.+.+-+.|++.||++.|.|+ ++|..+.. .+.++.+ ..+ ++..++.-.+-|+++++.
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm-~~Gl~vmf~sTilFaf---g~s-----y~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM-VAGLFVMFLSTILFAF---GNS-----YPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHH-HHHHHHHHHHHHHHHH---cch-----hHHHHHHHHHhhhhHHHH
Confidence 4689999999999999999999999999977655 45554432 2222222 111 245889999999999999
Q ss_pred hhhhHhHHHHhccCChh--hhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHh
Q 021469 236 NTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~--~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~~~~ 299 (312)
.|.--+++++.||||.| +++++.-.+-++|.-++--+.+.+ .-++.+.++.+++++..+.-+.+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 99999999999998874 567777777777766665555543 33456778886666655554444
No 181
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.66 E-value=0.002 Score=60.68 Aligned_cols=114 Identities=11% Similarity=-0.028 Sum_probs=73.0
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..++|+++..+.+...+++.+.|.+.||++|+.....+..+... .+...+..+.++ .+..++..++.|.+.+..
T Consensus 38 ~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~-----~~~l~~~~~l~~~~~~~~ 111 (382)
T TIGR00902 38 EEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA-IFAAAFSAGAHN-----AWLLFIAIGLFALFFSAG 111 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHHHhhhh-----HHHHHHHHHHHHHHHccc
Confidence 46789999999999999999999999998864322111111111 111111112222 234555666677777666
Q ss_pred hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....++.. .+++++.++++..|.+.++|.+++-.+...+
T Consensus 112 ~p~~~al~~-~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 112 MPIGDALAN-TWQKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred hhHHHHHHH-HHHHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 666666654 3455556789999999999988888766654
No 182
>PRK09848 glucuronide transporter; Provisional
Probab=97.63 E-value=0.0024 Score=61.45 Aligned_cols=118 Identities=14% Similarity=0.235 Sum_probs=72.2
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCC----CChhhHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGL----PSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~ 231 (312)
..+|.++.+..+..++...+.|.+.||. |||++.+..+.+.......+++. .+.+.+. ....+.++...+++.+
T Consensus 44 ~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 122 (448)
T PRK09848 44 AAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW-VPTDWSHSSKVVYAYLTYMGLGLC 122 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh-CcCCCCcchHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999975 56666655665555444333321 1211111 1123456677888999
Q ss_pred hhHHhhhhHhHHHHhccCChhh-hHHHHHH-HHHH-HHHHHHHhhhh
Q 021469 232 DGVLNTQLSALLGILFKHDTEG-AFAQLKV-WQCA-SIAVVFFIGPY 275 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~~~~-afa~~~~-~qs~-g~ai~f~~~~~ 275 (312)
.++.++-..++...+.+|++|+ ..+..|. ..++ +..++..+.+.
T Consensus 123 ~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~ 169 (448)
T PRK09848 123 YSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPS 169 (448)
T ss_pred HHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887777777776664432 3333443 2233 23344444443
No 183
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.62 E-value=0.0011 Score=64.20 Aligned_cols=111 Identities=12% Similarity=0.059 Sum_probs=73.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH-HHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~d~~~ 235 (312)
...+++...+.+...+++.+.|++.||++||+ .++.+.++.....++. .+.++ .+..++. .++.|++.+..
T Consensus 54 ~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~l~G~~~~~~ 125 (455)
T TIGR00892 54 SETAWISSIMLAVLYAGGPISSILVNRFGCRP-VVIAGGLLASLGMILA--SFSSN-----VIELYLTAGFITGLGLAFN 125 (455)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHcCchH-HHHhhHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHHhcchhh
Confidence 45667777777777888999999999999776 4445554444333322 12222 1222333 36778888765
Q ss_pred hhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 236 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
......++...+++++..+.++.....++|.+++-.+.+.
T Consensus 126 ~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 126 FQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 5556677788888777788999998888888777555543
No 184
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.61 E-value=0.0026 Score=59.98 Aligned_cols=111 Identities=14% Similarity=0.022 Sum_probs=76.3
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+++|++...+.++..++++..|.+.||++||+ +............. .. ...++ .....+.-++.|++.+...
T Consensus 26 ~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~-~~-~~~~~-----~~~l~~~R~l~G~g~~~~~ 97 (368)
T TIGR00903 26 EELGLLAITYPAAFLALTIPSGLLLDRAFKRW-FLFGSLATFAAAAG-RL-LDPFN-----YEWLLACQLLAALGQPFLL 97 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHH-HH-HHhcc-----HHHHHHHHHHHHhHhHHHH
Confidence 46788888899999999999999999999765 43333222222211 11 11122 2346677788898888653
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.....+.+.+|+ ++..+.++.....++|..++..+.+.+
T Consensus 98 -~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l 137 (368)
T TIGR00903 98 -NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI 137 (368)
T ss_pred -HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445777764 446889999999999999998887765
No 185
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.58 E-value=0.0025 Score=56.77 Aligned_cols=135 Identities=16% Similarity=0.078 Sum_probs=88.5
Q ss_pred hhhhhhcccccccccccccc--hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 021469 138 QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 215 (312)
Q Consensus 138 ~~f~~~~~~~~~~s~~lg~~--~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (312)
..|-.+.|..++- ..+|.+ ++..+-.+-.++..+ +++.|.+.|++|.+. +..+|.+.+...|.++.......-+.
T Consensus 17 t~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~-~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV-VLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 3444456665553 223433 344444455556655 688899999998664 56788888888887665433221111
Q ss_pred CCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 216 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 216 ~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
...|...+..++-|.+.+..+|-.....-.-||+++..+.++.|.+..+++++-..+..-
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHH
Confidence 112344455556667777778877777778899999899999999999999987766443
No 186
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.57 E-value=0.003 Score=58.56 Aligned_cols=113 Identities=10% Similarity=-0.062 Sum_probs=70.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCC-----CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 231 (312)
+++|+.... ++...+ ..+.|.+.||+ |||++.++.+.++...+...+. ..++.. +.+..+...++.+++
T Consensus 23 ~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~-~~~~~~---~l~~l~~~~~~~~~~ 96 (356)
T TIGR00901 23 KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS-FLVPST---DLPLLAGLAFLIAFF 96 (356)
T ss_pred HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH-cCCcch---hHHHHHHHHHHHHHH
Confidence 345555432 333344 88999999987 6666555555555544433222 222221 123466777788899
Q ss_pred hhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 232 DGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.+.......+++.+.+|+ ++..+.++.....++|..++-.+...
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888899998864 44567777666666666666555543
No 187
>PRK09669 putative symporter YagG; Provisional
Probab=97.56 E-value=0.0026 Score=61.16 Aligned_cols=114 Identities=20% Similarity=0.160 Sum_probs=78.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC-chHHHHHHHHHHhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLIMAALLGIG 231 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~ 231 (312)
..+|.++.+.-+..++...+.|.+.|| +|||+|.++.+.+.....+.+.+ +.|+.+..+ ..+.++.+.+++.+
T Consensus 45 ~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f--~~p~~~~~~~~~~~~~~~~l~~~~ 122 (444)
T PRK09669 45 AIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF--YTPDFGATGKIIYACVTYILLSLV 122 (444)
T ss_pred HHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH--hCCCCCcchHHHHHHHHHHHHHHH
Confidence 467888888888999999999999997 56667776667666655544333 344322111 23566778888888
Q ss_pred hhHHhhhhHhHHHHhccCChhh--hHHHHHHHHHHHHHHHHHh
Q 021469 232 DGVLNTQLSALLGILFKHDTEG--AFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~~~~--afa~~~~~qs~g~ai~f~~ 272 (312)
.++.+.-..++.+++.+|++|+ ..+.......+|..++-.+
T Consensus 123 ~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 123 YTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred HHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887778888887665543 4566666667776666543
No 188
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.45 E-value=2.3e-07 Score=89.09 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=59.2
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH--hcccCCCC-CCCchHHHHHHHHH-HhhhhHHhhhhH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSG-VLGTLYPLIMAALL-GIGDGVLNTQLS 240 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~l~-G~~d~~~~t~~~ 240 (312)
..++.+.++.++...+.||+|||+ +.+.+......+...+. ..+.++.+ ..+. ...+...++ ......+....+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~GRr~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~l~~~~~~~g~~~~~~ 371 (451)
T PF00083_consen 294 ILGLVNFLGTLLAIFLIDRFGRRK-LLIIGLLLMAICSLILGIIFFLGVSSSSWWSI-LSIVFLALFFAFFSLGWGPLPW 371 (451)
T ss_pred cccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-ccceeeeecccccccccccccc
Confidence 445667777778778999999875 54455544443333221 11112221 1111 111111122 223335556666
Q ss_pred hHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 241 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 241 ~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.+.++.||.+ +..+.++......++..++-.+.+.
T Consensus 372 ~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~ 407 (451)
T PF00083_consen 372 IYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPY 407 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc
Confidence 7778999854 4567777777777777766555554
No 189
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.43 E-value=0.01 Score=56.09 Aligned_cols=148 Identities=11% Similarity=-0.003 Sum_probs=72.5
Q ss_pred ChhhHHHHHHHHhhhhHhhhhhhcccccccccccc--cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH
Q 021469 121 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 198 (312)
Q Consensus 121 ~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg--~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~ 198 (312)
|++...++-..+.+++..++.....+-.+ .+.+| ...+|.......+...+.+.+.|.+.||+++|+.++..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFL-TDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 44444444445666665554433222111 12223 3567777655555444444444444899988765544443332
Q ss_pred HHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-h--hhHHHHHHHHHHHHHHHHHhhhh
Q 021469 199 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E--GAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~--~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
.....+. .+.++ .+..+++..+.|...+........+..+..+++. + ...+..+...++|..++-.+...
T Consensus 93 ~~~~~~~--~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~ 165 (393)
T PRK15011 93 VLACTLF--AWNRN-----YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA 165 (393)
T ss_pred HHHHHHH--HHhhH-----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 2221111 12111 1223344444444444555556666655444322 2 12356777777888877777665
Q ss_pred h
Q 021469 276 I 276 (312)
Q Consensus 276 l 276 (312)
+
T Consensus 166 l 166 (393)
T PRK15011 166 L 166 (393)
T ss_pred H
Confidence 4
No 190
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.41 E-value=0.0021 Score=59.55 Aligned_cols=103 Identities=9% Similarity=-0.052 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCc---hHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 169 FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT---LYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 169 ~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
...+++.+.|++.||++||+ .+.++.++......... +.++-+.... ...++..++.|++.+......+.++.+
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKK-TLVITLLMMGIGTLLIG--LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHH-HHHHHHHHHHHHHHHHh--hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 34578899999999999776 44566555544433222 2122110001 135566788999998888888889999
Q ss_pred hccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 246 LFKH-DTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 246 ~~~~-~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.+++ ++..+.+.......+|..++-.+..
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8865 4456788888877788777665543
No 191
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.40 E-value=0.0042 Score=59.54 Aligned_cols=107 Identities=9% Similarity=-0.080 Sum_probs=69.1
Q ss_pred HHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCC---CchHHHHHHHHHHhhhhHHhhhhH
Q 021469 164 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL---GTLYPLIMAALLGIGDGVLNTQLS 240 (312)
Q Consensus 164 ~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~d~~~~t~~~ 240 (312)
....++..+|+++.|.+.||+|||+ .+..+.++....-+... ..|+-... .+....+.-++.|++.+.......
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~ 146 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKK-SMLISVCMMCFGSLVIA--CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA 146 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHH-HHHHHHHHHHHHHHHHh--hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH
Confidence 3344556699999999999999876 44455444433222211 11221100 012356677899999998888888
Q ss_pred hHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469 241 ALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 241 ~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.++.+.+|+++ ..+.+........|..++..+.
T Consensus 147 ~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 147 TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987544 5677777777777777776543
No 192
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0083 Score=58.01 Aligned_cols=114 Identities=20% Similarity=0.160 Sum_probs=78.1
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhhh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIGD 232 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~d 232 (312)
.+|.+..+-=+-.++.-.++|.+.|| +|||+|-++.+.+.......+.+ ++|+.+. ....++++.+++|+++.
T Consensus 49 ~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F--~~p~~~~~~k~~ya~vtY~l~~l~Y 126 (467)
T COG2211 49 LAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF--ITPDFSMTGKLIYALVTYMLLGLGY 126 (467)
T ss_pred HHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH--cCCCcccCcchHHHHHHHHHHHHHH
Confidence 45555556666688888899999995 56777777778777665555443 4454321 22357899999999999
Q ss_pred hHHhhhhHhHHHHhccCChhhh--HHHHHHHHHHHHHHHHHhh
Q 021469 233 GVLNTQLSALLGILFKHDTEGA--FAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~~~~a--fa~~~~~qs~g~ai~f~~~ 273 (312)
+..|.--.++.+.+.+|.+|++ .+.-...-++|..+.....
T Consensus 127 T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~ 169 (467)
T COG2211 127 TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF 169 (467)
T ss_pred HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888888888776643 4455555555545555544
No 193
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.0015 Score=61.73 Aligned_cols=148 Identities=14% Similarity=0.184 Sum_probs=98.9
Q ss_pred HHHhhcChhhHHHHHHHHhhhhHhhhhhh--ccc---ccccccc-cccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChh
Q 021469 115 ITTLLADVRMLLIIPLFAYSGLQQAFVWA--EFT---KEIVTPA-LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT 188 (312)
Q Consensus 115 ~~~~~~~~~~lll~p~~~~~G~~~~f~~~--~~~---~~~~s~~-lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~ 188 (312)
+.+..+.+|++.++-++ .|+. +||.. .|+ ..+.++. +..+++|.+..++.+.-.++-+++|.++||.+.|+
T Consensus 19 ~~~~y~~~r~qif~~~f--iGYa-~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 19 IDKTYKRWRIQIFLSIF--IGYA-AFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHH--HHHH-HHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 34556677777666443 3432 23321 111 1122222 34567899999999999999999999999987664
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHH
Q 021469 189 FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIA 267 (312)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~a 267 (312)
.+.+++++..++-++ .-+.+. .++..++.++.|+.++.--.-++.++++.|+. ++.+..++++.-+++|.+
T Consensus 96 -fm~~gLilsai~nil--~Gfs~s-----~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa 167 (448)
T COG2271 96 -FMAFGLILSAIVNIL--FGFSPS-----LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA 167 (448)
T ss_pred -eehHHHHHHHHHHHH--HhhhhH-----HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc
Confidence 445666555443322 122221 13456677788888877777888899999874 446899999999999999
Q ss_pred HHHHhh
Q 021469 268 VVFFIG 273 (312)
Q Consensus 268 i~f~~~ 273 (312)
+.-.+.
T Consensus 168 l~~~~~ 173 (448)
T COG2271 168 LAPLVA 173 (448)
T ss_pred hHHHHH
Confidence 988777
No 194
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.37 E-value=0.00078 Score=64.49 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=83.7
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhc----CCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCCC-chHHHHHHHHHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLG-TLYPLIMAALLGI 230 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~G~ 230 (312)
..+|.++.+..+..++...+.|.++| |+|||+|.+.++.++...++.+++ .-+| +.+... ..+.++..+++.+
T Consensus 37 ~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf-~~~p~~~~~~~~~~~~~~~~~l~~~ 115 (428)
T PF13347_consen 37 ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF-SPPPAGLSFTAKLVWLFVFYILFDI 115 (428)
T ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh-ccccchhhhhhHHHHHHHHHHHHHH
Confidence 45677888788888888889999999 678888888888888777766554 2213 211111 1346788888899
Q ss_pred hhhHHhhhhHhHHHHhccCCh--hhhHHHHHHHHHHHHHHHHHhhh
Q 021469 231 GDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 231 ~d~~~~t~~~~i~g~~~~~~~--~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+-.+.+....++..++.+|++ .+..+.-+.+..+|..+...+.+
T Consensus 116 ~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 116 AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 999999988899999887644 35566777778888865555444
No 195
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0034 Score=56.70 Aligned_cols=101 Identities=20% Similarity=0.259 Sum_probs=67.0
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 243 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~ 243 (312)
+|+++ .+.+-+.|.+.|+.|++...+..+++..+.+=..++ -.+. ++.-..++|...+..--...-.+
T Consensus 309 vy~Is-av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls----------Py~~m~~lGLsysllAcslWP~v 377 (459)
T KOG4686|consen 309 VYGIS-AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS----------PYTSMTFLGLSYSLLACSLWPCV 377 (459)
T ss_pred hhhhh-hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc----------HHHHHHHHhhhHHHHHHHHhhhh
Confidence 45554 455667789999998764333334333333322221 1221 56677788888877655555577
Q ss_pred HHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 244 GILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 244 g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+.+-||+. ..+++..+.+|++|-++.-.+...+
T Consensus 378 a~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 378 ASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred hhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 77777655 6899999999999999999887764
No 196
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.31 E-value=0.0063 Score=61.63 Aligned_cols=112 Identities=18% Similarity=0.234 Sum_probs=72.9
Q ss_pred eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCc-------CCCC------chhhHHHHH
Q 021469 7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-------STSG------TTLLFIVFL 73 (312)
Q Consensus 7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~-------~~~~------~~~~~~if~ 73 (312)
+|+.++..+ ++-..|.|+.+++..+|.++|=++..+.++...+. .... .+.=|++..
T Consensus 260 sYiDDnvk~----------~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g 329 (735)
T KOG3626|consen 260 SYIDDNVKK----------KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG 329 (735)
T ss_pred ccccccccc----------cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence 689888875 68899999999999999999999998887543222 1111 123366666
Q ss_pred HHHHHHHHHHHhccCCcccc------cc-----chh---hcchhhhhHHHHHHHHHHHhhcChhhHHHH
Q 021469 74 GVITLGTILMCFLRKEEDKG------EK-----ETA---DASVNFYSYLVSLSKSITTLLADVRMLLII 128 (312)
Q Consensus 74 ~i~~~g~~l~lfL~~~~~~~------~~-----~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~lll~ 128 (312)
++..+..+.++++|+..+.. ++ +++ +.+....+.+++-.+.++++++||-..+.+
T Consensus 330 ~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~ 398 (735)
T KOG3626|consen 330 ALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVV 398 (735)
T ss_pred HHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHH
Confidence 66777777778887632211 11 111 111122346778888888899999864443
No 197
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.31 E-value=0.0023 Score=64.69 Aligned_cols=120 Identities=19% Similarity=0.142 Sum_probs=84.5
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH-HHHHHHHHhc-----ccCC-------------CCC-
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ-VVVFLWILIN-----YSVT-------------SGV- 215 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~-------------~~~- 215 (312)
....|.+...+.++..++.++.|++.||.+||+.+ .++.++. +.+++..+.+ +.++ .+.
T Consensus 67 s~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i-~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c 145 (633)
T TIGR00805 67 TSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI-GIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLC 145 (633)
T ss_pred CCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE-EecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccc
Confidence 34578888899999999999999999999877644 3343333 3333222211 1000 000
Q ss_pred --------------------C--C-c-hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHH
Q 021469 216 --------------------L--G-T-LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 270 (312)
Q Consensus 216 --------------------~--~-~-~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f 270 (312)
. . + ...++.-++.|++.+...+....++.+.+|++ +..+.+++.....+|.++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ 225 (633)
T TIGR00805 146 MENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGY 225 (633)
T ss_pred cCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHH
Confidence 0 0 1 23457889999999999999999999988754 46789999999999999999
Q ss_pred Hhhhhh
Q 021469 271 FIGPYI 276 (312)
Q Consensus 271 ~~~~~l 276 (312)
.+.+.+
T Consensus 226 llgg~l 231 (633)
T TIGR00805 226 LLGSFC 231 (633)
T ss_pred HHHHHH
Confidence 987754
No 198
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.31 E-value=0.00016 Score=59.69 Aligned_cols=38 Identities=26% Similarity=0.567 Sum_probs=34.3
Q ss_pred CCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC
Q 021469 21 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 58 (312)
Q Consensus 21 ~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~ 58 (312)
..++|++++|++|+||+++++|+++||++.+++++.++
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~~~ 153 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQGQT 153 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 35678899999999999999999999999999988654
No 199
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.31 E-value=0.0057 Score=60.20 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=89.1
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
+.+.+...+.++..+|+++.|++.|++|||+ .++++.++..+.+++... .++ .....+.-++.|+|-+..+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~-~l~~~~~~~~iG~ii~~~--a~~-----~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKK-TLLLAVVLFLIGAIIIAL--APS-----WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHH--hhh-----HHHHHHHHHHhccchhhhhh
Confidence 3478888999999999999999999999875 556777776666655432 222 24577889999999999999
Q ss_pred hhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 238 QLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYIS 277 (312)
Q Consensus 238 ~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~ 277 (312)
.....+++..|. .+....+.+.+....|..+++.++...+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 999899998876 4466788899999999999988877663
No 200
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.29 E-value=0.024 Score=55.72 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=31.2
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 203 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~ 203 (312)
-...+..++.++++..+...+.||++||. +++.+......+.+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~-lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRK-LLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHhHHHHHHHHH
Confidence 34456788889999999999999998775 55566555554444
No 201
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.20 E-value=0.0068 Score=59.58 Aligned_cols=130 Identities=12% Similarity=-0.010 Sum_probs=86.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
........++-++..+|+++.|.+.||+|||. +++++.++....-+.. .+.++ .+...+.-++-|++.+...
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~-~~~~~~~~~~i~~~~~--a~a~~-----~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP-VLLVSLLLFIIFGILT--AFAPN-----YWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHH-HHHHHHHHHHHHHHHH--HHhCc-----HHHHHHHHHHHHhhccchh
Confidence 34556667788899999999999999999775 5556655554333221 23333 3457889999999999999
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhHHHH--HHHHHHHHHHHHHH
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISLQAM--LIVMVVGICVALVG 295 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~--~~il~~~~~~~~~~ 295 (312)
+..+.++.+..+. .+..+.+. ......+..++..+..++...|+ .++.....++.++.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999998754 44455555 56666666666666666543443 44444444434333
No 202
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0054 Score=59.21 Aligned_cols=140 Identities=24% Similarity=0.285 Sum_probs=91.8
Q ss_pred HHhHHHHHHHHHHhhhhcCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHH
Q 021469 165 VYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 243 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~ 243 (312)
.|+..--+..+++|++.||+ |+|+.+ ++|.++..+..+.+. .+... .+...++-.++.++|.+.+...+.+++
T Consensus 69 ~y~slVY~t~i~GG~laDr~LG~~~tI-~lGail~~iGh~~L~--~~~~~---~~~gl~i~L~~I~iG~Gl~K~NiS~ll 142 (498)
T COG3104 69 AYGSLVYLTPIIGGWLADRVLGTRRTI-VLGAILMAIGHLVLA--ISSVS---GPGGLYIGLALIIVGTGLFKPNISSLL 142 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHh--ccccc---cccHHHHHHHHHHhccccccccHHHHH
Confidence 45555556778889999996 766645 466666655554432 33211 123467777788899999999999999
Q ss_pred HHhccCCh---hhhHHHHHHHHHHHHHHHHHhhhhhhHHH----HHHHHHHHHHHHHHHHHHhhhhhhhccCCC
Q 021469 244 GILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYISLQA----MLIVMVVGICVALVGILFLTIQVEKAFYSP 310 (312)
Q Consensus 244 g~~~~~~~---~~afa~~~~~qs~g~ai~f~~~~~l~~~~----~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (312)
|++||+++ ...|+++..--++|+.++=.+.+.+.... .+..-.+-..++++-|....++.+.+.+++
T Consensus 143 g~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~ 216 (498)
T COG3104 143 GELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVP 216 (498)
T ss_pred HHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCC
Confidence 99997433 47899999998999888887777654332 233333455566665655555554444433
No 203
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.10 E-value=0.24 Score=47.27 Aligned_cols=219 Identities=15% Similarity=0.054 Sum_probs=117.8
Q ss_pred echhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhccCCcccc---cc----------
Q 021469 29 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG---EK---------- 95 (312)
Q Consensus 29 g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL~~~~~~~---~~---------- 95 (312)
-|..+.-=+....|..+|++++-.+..... .....+..+=.+..+++.++.+|||+|++.. |+
T Consensus 128 q~vts~~raa~l~g~~~s~~lgQllvs~~~----~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~ 203 (412)
T PF01770_consen 128 QKVTSYTRAATLVGRFISSLLGQLLVSFGG----VSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANES 203 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccc
Confidence 345666666777777777777765544221 1122343333455778888889999876411 00
Q ss_pred --chh----hc-------ch----hhhhHHHHHHHHHHHhhcChhhHHHHH--HHHhhhhH------hhhhhhccccccc
Q 021469 96 --ETA----DA-------SV----NFYSYLVSLSKSITTLLADVRMLLIIP--LFAYSGLQ------QAFVWAEFTKEIV 150 (312)
Q Consensus 96 --~~~----~~-------~~----~~~~s~~~~~~~~~~~~~~~~~lll~p--~~~~~G~~------~~f~~~~~~~~~~ 150 (312)
|.. +. +. .....+++..++..+..+||+++.-.- .+-.+|+. |.-|..+-+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~---- 279 (412)
T PF01770_consen 204 ESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP---- 279 (412)
T ss_pred cccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC----
Confidence 000 00 00 011123344444555667888754432 12223332 333322201
Q ss_pred ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH-HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHH
Q 021469 151 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS-GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 229 (312)
Q Consensus 151 s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 229 (312)
..-...+.|.+-+...+.++++++..|++..++.+-..+.+ +...+..++.. ...+.++ -+.+++.+++++
T Consensus 280 -~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~--lm~~t~~-----Iwv~Y~~yIif~ 351 (412)
T PF01770_consen 280 -SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLF--LMSFTGN-----IWVCYAGYIIFR 351 (412)
T ss_pred -CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHH--HHHHhhH-----HHHHHHHHHHHH
Confidence 10123467889898999999999999998545543222221 22222222222 2223222 367899999999
Q ss_pred hhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHH
Q 021469 230 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC 263 (312)
Q Consensus 230 ~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs 263 (312)
.......|....-++.--.+++ .-.|++..+.--
T Consensus 352 ~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 352 SLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 9988888888877777655444 556776666533
No 204
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.07 E-value=0.099 Score=48.84 Aligned_cols=142 Identities=14% Similarity=0.113 Sum_probs=89.7
Q ss_pred HHhhcChhhHHHHHHHHhhhhHhhhhh---hcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHH
Q 021469 116 TTLLADVRMLLIIPLFAYSGLQQAFVW---AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS 192 (312)
Q Consensus 116 ~~~~~~~~~lll~p~~~~~G~~~~f~~---~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~ 192 (312)
.++++||.-..+ .+|.|+...-++ +-+|+.+++.-++.++.|.......+.+++.++.+-.+.+|.+.++++.+
T Consensus 202 ~~vw~~~~aW~v---tLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~ 278 (395)
T COG2807 202 RKVWRSPLAWQV---TLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVV 278 (395)
T ss_pred cccccCchhHHH---HHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 456677765544 445565444333 33666666665556678888888999999999998888887543455655
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHH
Q 021469 193 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV 269 (312)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~ 269 (312)
....+....+.-. +.+| .. ....-.+++|++.+......-.++....+|.+ ++-.+.-+.|++|--++
T Consensus 279 ~~~~~~l~G~~G~-~~~P-~~------~~~lw~~llG~G~G~~F~laL~li~~rs~~a~-~Aa~LSgmaQg~GYllA 346 (395)
T COG2807 279 LALLLMLVGLVGL-LLAP-GQ------LPILWALLLGLGQGGAFPLALTLILLRSSDAA-IAAALSGMAQGVGYLLA 346 (395)
T ss_pred HHHHHHHHHHHHH-HHhh-hh------HHHHHHHHHhCccchHHHHHHHHHHhhcCChH-HHHHHHHHhhhhhHHHH
Confidence 5555555444322 2233 31 12222588888877766776677777665544 47788888888776554
No 205
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.04 E-value=0.17 Score=49.34 Aligned_cols=252 Identities=15% Similarity=0.105 Sum_probs=139.3
Q ss_pred ceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HH
Q 021469 6 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MC 84 (312)
Q Consensus 6 G~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~l 84 (312)
|.|.+-.|.-.+...+.+++++|....|+-.+.+..+..+|.+......+..+. ...+.+=.+...++.+. .+
T Consensus 124 g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~------a~~f~ia~~~~~~~~~y~~~ 197 (463)
T KOG2816|consen 124 GGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI------ALVFLIAAASGILSLLYMLL 197 (463)
T ss_pred cchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHHHHhh
Confidence 344555555555566666678899999998888888888888888777654221 22333334444444433 35
Q ss_pred hccCCccccccc-hhh--c--chhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhh----cccccccccccc
Q 021469 85 FLRKEEDKGEKE-TAD--A--SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA----EFTKEIVTPALG 155 (312)
Q Consensus 85 fL~~~~~~~~~~-~~~--~--~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~----~~~~~~~s~~lg 155 (312)
++|++.++++++ .+. . .........+..+...+.=.+|+.+.+.+..++.-.....-.. .|.|.- ...+
T Consensus 198 ~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~--f~w~ 275 (463)
T KOG2816|consen 198 FLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK--FGWN 275 (463)
T ss_pred ccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee--cCcC
Confidence 666655544332 110 0 0001111223333333433456666666555554443332212 122221 1234
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
.++.+......++.+.++.++...++.+ ++-|+ ++.+|...+.....+.-..|.++ ..|...+ .......
T Consensus 276 ~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~~af~~~~w-------~~~~~~v-~~~~~~~ 346 (463)
T KOG2816|consen 276 KKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLLFAFATETW-------MMFAAGV-VVALAGI 346 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHHHHHhccch-------hhhHHHH-HHHhhcc
Confidence 5667777777888888888888855553 45444 66788888776655433344322 2233222 2333334
Q ss_pred HhhhhHhHHHHhc-cCChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 235 LNTQLSALLGILF-KHDTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 235 ~~t~~~~i~g~~~-~~~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
......+..+.+- +|+...++++....+++...++-.+-.
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHH
Confidence 4466666777765 344567899999988888777665433
No 206
>PTZ00207 hypothetical protein; Provisional
Probab=97.04 E-value=0.037 Score=55.39 Aligned_cols=131 Identities=11% Similarity=0.215 Sum_probs=81.8
Q ss_pred HHHHhHHHHHHHHHHhhhh----cC-----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhh
Q 021469 163 MAVYGAFDAICSLAAGRLT----TG-----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 233 (312)
Q Consensus 163 ~~~~g~~~~ig~~~~G~l~----d~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~ 233 (312)
..++++++.+|=+.+|.+. +| ++ |+..+.+..+ ..++.++++...|.. -.++.+++-|+|.+
T Consensus 397 vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~p-rt~~l~~~~~-~~~~~lll~~~~p~~-------~L~~~~~lvg~~~G 467 (591)
T PTZ00207 397 TVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVP-ITIALFIPSV-CIITMLTLFLTLPKA-------ALPLPYFIAAFANG 467 (591)
T ss_pred hhhhhHHHHhhHHHHHHHHHHHHhhccccccc-hhHHHHHHHH-HHHHHHHHHHHCCcc-------HhHHHHHHHHHHhh
Confidence 4568888888888888765 21 22 2212233333 333334333344422 27888999999999
Q ss_pred HHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh---------------------hhHHHHHHHHHHHHHHH
Q 021469 234 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY---------------------ISLQAMLIVMVVGICVA 292 (312)
Q Consensus 234 ~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~---------------------l~~~~~~~il~~~~~~~ 292 (312)
..-.....+..++|.++-. ..||+....+-.-++.++.. -|....+.++.++++++
T Consensus 468 ~~~~~~~~i~selFgk~~g---~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g 544 (591)
T PTZ00207 468 FMAATIALVTRTIFAKDPA---KHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLA 544 (591)
T ss_pred HhHHHHHHHHHHHhccchH---HHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHH
Confidence 9989999999999974333 34444443333333333221 14566788899999999
Q ss_pred HHHHHHhhhhhhh
Q 021469 293 LVGILFLTIQVEK 305 (312)
Q Consensus 293 ~~~~~~~~~~~~~ 305 (312)
.+.-.++-+|++|
T Consensus 545 ~~~s~~l~~R~r~ 557 (591)
T PTZ00207 545 FITSTYVHLQYRR 557 (591)
T ss_pred HHHHhheeeehHH
Confidence 9988888766654
No 207
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.03 E-value=0.021 Score=55.49 Aligned_cols=109 Identities=14% Similarity=0.059 Sum_probs=83.1
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 238 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~ 238 (312)
.|.+...+..+-.++.+.+|.+.||++.|+ ++.++.+...+..++.. +... .....++=+++|++.+..- .
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-vL~l~~l~Wsl~t~L~~--fa~S-----l~~L~i~R~llGvaEA~~~-A 134 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-VLVLQALSFVCVWLLLL--LGTS-----VWHMQLMEVFYSVTMAARI-A 134 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHHH-H
Confidence 677888888888999999999999998665 55555555544433322 2111 1236788999999999988 8
Q ss_pred hHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 239 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 239 ~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
.+.++...+|.+ +.++.+.++.-..+|.+++-.+.+.+
T Consensus 135 ~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 135 YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999854 47899999999999999999887753
No 208
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.02 E-value=0.015 Score=56.84 Aligned_cols=105 Identities=13% Similarity=0.007 Sum_probs=68.3
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHh
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSA 241 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~ 241 (312)
..-++-.+|+++.|++.||+|||+ .+.++.++...+-++. ...|+-...+ +.+..+.-++.|++.+........
T Consensus 65 ~~~l~~~ig~~~~G~l~Dr~Grr~-~l~~~~~l~~i~~~~~--a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~ 141 (490)
T PRK10642 65 VPFLIRPLGGLFFGMLGDKYGRQK-ILAITIVIMSISTFCI--GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI 141 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH
Confidence 344667899999999999999876 4445554443332221 2222211000 013566788899999999999999
Q ss_pred HHHHhccCC-hhhhHHHHHHHHHHHHHHHHHh
Q 021469 242 LLGILFKHD-TEGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 242 i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~ 272 (312)
++.+.+|++ +..+.++......+|..++..+
T Consensus 142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999754 4566777776666666666544
No 209
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.00 E-value=0.018 Score=55.16 Aligned_cols=66 Identities=11% Similarity=0.047 Sum_probs=43.3
Q ss_pred HHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH
Q 021469 130 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 198 (312)
Q Consensus 130 ~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~ 198 (312)
.+...|+..++..-...+.+ -+..+++|+++..+.++..+++.+.|++.||++||++++.++.+..
T Consensus 14 ~~~~~~~~~~~l~~~l~~~~---g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 14 QWFIWGSWLVTLGSYMSKTL---HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 34444555455443333222 1234679999999999999999999999999865444555554444
No 210
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.91 E-value=0.043 Score=54.87 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=78.1
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
....++.....+++.++..+.|+|+|.+|||. .++.+.++.+...+..- ..++ ..-...-..+.|++-+. +
T Consensus 78 ~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-~~i~g~~l~vvG~Iv~a--tA~~-----~~~~iag~~l~GvgaG~-~ 148 (599)
T PF06609_consen 78 DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-FFIIGSLLGVVGSIVCA--TAQN-----MNTFIAGMVLYGVGAGV-Q 148 (599)
T ss_pred ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-HHHHHHHHHHhHHHHhh--cCCc-----HHHHHHHHHHHHHhhHH-H
Confidence 34456666788889999999999999999774 66677777665554332 2222 11256677888998554 4
Q ss_pred hhhHhHHHHhccCChhhhHHHHHHHHHHH--------HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHDTEGAFAQLKVWQCAS--------IAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQ 302 (312)
Q Consensus 237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g--------~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~ 302 (312)
-..+..++++.|.+.. ..+. .+..+. ..++..+...-+.+|-+++..++..++++.....-+.
T Consensus 149 ~~~~~~isEl~p~k~R-~~~~--~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 149 ELAALAISELVPNKWR-GLGL--AIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred HHHHHHHHHhcccchh-hhHh--HHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4567778888875443 2221 111122 2222222222245666666666666666555444333
No 211
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.88 E-value=0.043 Score=51.99 Aligned_cols=112 Identities=15% Similarity=0.157 Sum_probs=79.9
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHH-HHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA-QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+.+++.+.-.+...+-=+..|.+.||+|.|+... +..++ .+-++.+.+-..+|+ ++..+++..+.|++.+.+
T Consensus 49 ~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~-~s~~l~~IP~~~~~~a~~~~~-----~~~ll~~gll~G~~GasF 122 (417)
T COG2223 49 GQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI-LSMLLLLIPCLGLAFAVTYPS-----TWQLLVIGLLLGLAGASF 122 (417)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH-HHHHHHHHHHHHHHHHccCCc-----hHHHHHHHHHHhccccee
Confidence 45677776667777778889999999998776433 33333 333333322122221 245889999999999988
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
-..++ .++..||+++ ..|.+++- .-++|.++..++.|.+
T Consensus 123 av~m~-~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 123 AVGMP-NASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred hcccc-cccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 77766 6778898655 57999999 9999999999999964
No 212
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.88 E-value=0.036 Score=52.94 Aligned_cols=130 Identities=10% Similarity=0.136 Sum_probs=80.1
Q ss_pred HHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh
Q 021469 128 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 207 (312)
Q Consensus 128 ~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (312)
.-.++..|....|+ +.|-+.. -+...++|.+++..++..+++..+.|.+.||.++++.+..+..++........
T Consensus 12 f~~f~~~G~~~p~~-~~~L~~~---G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~-- 85 (400)
T PF03825_consen 12 FLYFFAYGAFLPYL-PLYLESR---GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL-- 85 (400)
T ss_pred HHHHHHHHHHHHHH-HHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--
Confidence 33455677777776 3343332 12346899999999999999999999999997543334333333322222111
Q ss_pred cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHH
Q 021469 208 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV 269 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~ 269 (312)
.+.++ ++..+.+.+++.+..........++.-+.-+| +..-++-.|.|-++|..++
T Consensus 86 ~~~~~-----f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 86 AFSSS-----FWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD-RGKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred HHhcc-----HHHHHHHHHHHHHHHccHHHHHHHHHHHHccc-ccCCCCcchhhhhHHHHHH
Confidence 12122 23455666666666555555555555554444 3447899999999999887
No 213
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.86 E-value=0.0079 Score=56.36 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=72.9
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHH-HHHHHhhhhHHh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVLN 236 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~d~~~~ 236 (312)
.-|++-..|++++.+.+...|.++||.||| +++..+++.....++ .|.-+.+ .-+++. =++.|..++-.
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk-pvll~c~~~va~s~l----l~~~S~~----F~afv~aR~l~Gi~kgnl- 138 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRK-PVLLACLIGVALSYL----LWALSRN----FAAFVLARFLGGIFKGNL- 138 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCch-HHHHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHhhhhccCch-
Confidence 467888889999999999999999999976 455555444333222 2211110 114555 56667766554
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhH
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISL 278 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~ 278 (312)
+.+-+++++.++| ++..+++....-.++|.-++=.+..++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 5566789998865 34567888877777776666666666544
No 214
>PRK15075 citrate-proton symporter; Provisional
Probab=96.83 E-value=0.029 Score=53.78 Aligned_cols=102 Identities=14% Similarity=0.059 Sum_probs=64.4
Q ss_pred HHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHhHHHHh
Q 021469 170 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLGIL 246 (312)
Q Consensus 170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~i~g~~ 246 (312)
..+++++.|.+.||++||+ .+..+.++.....++. .+.++-...+ +....+.-++.|++.+........++.+.
T Consensus 69 ~~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~ 145 (434)
T PRK15075 69 RPLGAIVLGAYIDRVGRRK-GLIVTLSIMASGTLLI--AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEI 145 (434)
T ss_pred hhhHHHHHHHHhhhhchHH-HHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhh
Confidence 3578899999999999876 4445554443332222 1222210000 01235667889999988777777889998
Q ss_pred ccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 247 FKH-DTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 247 ~~~-~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+|+ ++..+.++.....++|..++..+..
T Consensus 146 ~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 146 ATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 875 4467888888877777665554443
No 215
>PRK09952 shikimate transporter; Provisional
Probab=96.78 E-value=0.048 Score=52.40 Aligned_cols=102 Identities=10% Similarity=0.001 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC---chHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 168 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 168 ~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
++..+|+++.|.+.||+|||+ .+.++.++.....++. .+.|+-...+ +...++.-++.|++.+........++.
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKR-MLMLTVWMMGIATALI--GLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 457799999999999999876 4445554444332222 2323211000 112556678889998887777778888
Q ss_pred HhccCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469 245 ILFKHDT-EGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 245 ~~~~~~~-~~afa~~~~~qs~g~ai~f~~ 272 (312)
+.+|+++ ..+.+.......+|..++-.+
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~ 180 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 8887654 455666666666666665433
No 216
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.77 E-value=0.069 Score=50.58 Aligned_cols=137 Identities=18% Similarity=0.090 Sum_probs=86.0
Q ss_pred HHHHHHHhhhhcCCC-----ChhhHHHHHHHHHHHHHHHHH---hcccC---CC---CCCCchHHHHHHHHHHhhhhHHh
Q 021469 171 AICSLAAGRLTTGLP-----SITFIVSGGAIAQVVVFLWIL---INYSV---TS---GVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 171 ~ig~~~~G~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~---~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...-...|+.+|+.+ ||.|-++.|..+........- +.... +. .+.+...+.+.+.++|+|-+..+
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 345667799999766 787777788777655433221 11111 11 11111357888999999999999
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhh-h----HHHH---HHHHHHHHHHHHHHHHHhhhhhhhcc
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI-S----LQAM---LIVMVVGICVALVGILFLTIQVEKAF 307 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l-~----~~~~---~~il~~~~~~~~~~~~~~~~~~~~~~ 307 (312)
|...+++.+..+| ++.++.++.....-+|..++-.....+ . .... ...-.+.+++.++..+-.|.|.+++.
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~ 187 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRA 187 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccc
Confidence 9999999999875 446788988888888888877766542 1 1111 11222344445555555565555443
No 217
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.70 E-value=0.32 Score=46.20 Aligned_cols=137 Identities=19% Similarity=0.181 Sum_probs=85.5
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
...|+.+..|+.+-.+++.+...+.||++||+.+. ....+....-++.. ..|+ ++...+.=++-|+.-+.+-
T Consensus 48 ~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl-~~l~lFi~~n~l~a--lAp~-----f~~Ll~aR~~~g~a~G~f~ 119 (394)
T COG2814 48 GAAGQLITAYALGVALGAPLLALLTGRLERRRLLL-GLLALFIVSNLLSA--LAPS-----FAVLLLARALAGLAHGVFW 119 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH-HHHHHHHHHHHHHH--Hhcc-----HHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999876443 33323222222222 2233 3446667788888888888
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFLTIQVE 304 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~----~l~~~~~~~il~~~~~~~~~~~~~~~~~~~ 304 (312)
.....+...+-|+++ .++.++...-.+++..++-=+.. .+..+.-+.... +++++.....-...+
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia---~l~ll~~~~~~~~lP 189 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIA---VLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHH---HHHHHHHHHHHHhCC
Confidence 888899999987644 57777766654444444433333 333443343333 334444444444444
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.64 E-value=0.062 Score=54.57 Aligned_cols=133 Identities=18% Similarity=0.153 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHhhhhcC-CCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 167 GAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 167 g~~~~ig~~~~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
....-+.++++|.+.|+ +|+++ .+.++.++.....+++.+ ..++..+.......++...+...|.+.....+.+..+
T Consensus 33 ~~l~yl~pilGg~iAD~~lG~~~-tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~g 111 (654)
T TIGR00926 33 TYLCYLTPLIGAIIADGWLGKFK-TILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGG 111 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhH
Confidence 33445566777888895 57655 344555555444443322 1221111001123556677778899999999999999
Q ss_pred HhccCC----hhhhHHHHHHHHHHHHHHHHHhhhhhhHH-----------HHHHHHHHHHHHHHHHHHHhh
Q 021469 245 ILFKHD----TEGAFAQLKVWQCASIAVVFFIGPYISLQ-----------AMLIVMVVGICVALVGILFLT 300 (312)
Q Consensus 245 ~~~~~~----~~~afa~~~~~qs~g~ai~f~~~~~l~~~-----------~~~~il~~~~~~~~~~~~~~~ 300 (312)
+.|+++ ..+.|.++.+.-++|+.++..+.+++... .-+.+..++.+++.+.+..--
T Consensus 112 dqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 112 DQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 999743 24678899999999988888887765321 233444455555555554433
No 219
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.63 E-value=0.067 Score=50.32 Aligned_cols=232 Identities=13% Similarity=0.051 Sum_probs=116.0
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHH---HHHHHhccCCccc-cccchhh
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG---TILMCFLRKEEDK-GEKETAD 99 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g---~~l~lfL~~~~~~-~~~~~~~ 99 (312)
.||++++-.+.+-..+++|.++|..|..++-...+. + +.....+-.+.++.... ....++||++-.. +|+|+..
T Consensus 150 sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-~-g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~ 227 (451)
T KOG2615|consen 150 SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-S-GSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHS 227 (451)
T ss_pred ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-h-ccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhccccc
Confidence 457899999999999999999999887665432111 1 11122332333322222 2234677764322 2221110
Q ss_pred cchhhhhHHHHHHHH-----HHHhhcChhhH------------HHHHHHHhhhhHhhhhhhccccccccccccc--chhh
Q 021469 100 ASVNFYSYLVSLSKS-----ITTLLADVRML------------LIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVG 160 (312)
Q Consensus 100 ~~~~~~~s~~~~~~~-----~~~~~~~~~~l------------ll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~--~~~g 160 (312)
... +..+-.++.++ -..+++|++.. .++-.++++|++..- +.+-+--+|. .+.|
T Consensus 228 ~~~-~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~------~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 228 TLQ-EAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTV------LFLTHGRFGYSSMQQG 300 (451)
T ss_pred chh-hhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhH------HHhhcCccCCChhhhe
Confidence 000 00000011111 12234444422 233344445544221 1221111122 3456
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcCCCCh----hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTGLPSI----TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
.+...-|+. +.++.+.+..+.++. .........+..-.++ ++.+.+. +...+....+..++.+..-
T Consensus 301 ~vl~~tGl~---m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~l--lls~~~~-----~~~l~~~s~l~sf~~A~~v 370 (451)
T KOG2615|consen 301 KVLSTTGLL---MLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFL--LLSLART-----PVVLYLGSTLKSFSTASVV 370 (451)
T ss_pred eeeehhhHH---HHHHHHhccccccccccchhhHHHHHHHHHHHHHH--HHhcccc-----chhhhHHHHHHHHHHHHhh
Confidence 655555544 444555544433321 1112222222222222 1233222 2347788999999999999
Q ss_pred hhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 237 TQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 237 t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
|++..++.+..|. ++..+.+++|-..+++=+++=..++
T Consensus 371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999998874 5567888888888877777766664
No 220
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.15 Score=48.29 Aligned_cols=115 Identities=16% Similarity=0.071 Sum_probs=83.0
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
..+.+.+-.++-.+-.++++..|.+.||++.|+ -+++|+.+....-. +.|| .+...++....+..+.+|.|-++.
T Consensus 47 ~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-gi~lgL~l~avg~~---lF~p-Aa~~~~y~~FL~~lFila~Gi~~L 121 (422)
T COG0738 47 YFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-GIVLGLLLYAVGAA---LFWP-AASSKSYGFFLVALFILASGIGLL 121 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-HHHHHHHHHHHHHH---HHhh-hhhhhhHHHHHHHHHHHHhhhHHH
Confidence 345677777777788899999999999998665 34566666543322 2343 322223334555669999999999
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
||..+..++.+.++++ .+-.++.+.+.++|+.++=.+...
T Consensus 122 etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 122 ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999999999987644 456888899999999988766554
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.39 E-value=0.053 Score=52.84 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=83.7
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHH-HHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV-VVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
++-|+++..+..+.+++.+..|.+.||+|.|+.+ ..+.++.. .+++.-+. .+. .+..+++-++-|++++.
T Consensus 73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~-~~~~~~sa~~t~l~P~aa~~~-------~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 73 TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF-FISGLISALLTLLTPLAASIG-------FYLLLVLRFLQGLGQGV 144 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH-HHHHHHHHHHHHHHHHHHHhc-------chhhHHHHHHhHHHHhH
Confidence 3568888889999999999999999999977644 33433332 22211110 111 12468899999999999
Q ss_pred HhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhhhhH
Q 021469 235 LNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYISL 278 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~l~~ 278 (312)
....+..+..+-.|. ++....++......+|..++.-+++.++.
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~ 189 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE 189 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 999999999998874 44567888888888999999988887753
No 222
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.34 E-value=0.0039 Score=59.63 Aligned_cols=170 Identities=14% Similarity=0.033 Sum_probs=83.6
Q ss_pred CccccceeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHH-HHH
Q 021469 1 MGWRGGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVI-TLG 79 (312)
Q Consensus 1 ~~~aqG~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~-~~g 79 (312)
+|+|.-.|.+-..+-- .+.-++++|++-+++|+..-..|..+|.++...+-..... .+.=|.+-.+++ +++
T Consensus 131 vGiGeAs~~~ia~s~I---aD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~-----Wr~af~~~avl~vi~~ 202 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLI---ADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW-----WRWAFRGSAVLGVIVG 202 (493)
T ss_pred hccchhhhcccchhHh---hhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc-----eEEEEEeehHHHHHHH
Confidence 4666666655433321 1223567999999999999888888888777655332211 122222222233 334
Q ss_pred HHHHHhccCCcccccc--chhhcchhhhhHHHHHHHHHHHhhcChhh----HHHHHHHHhhhhHhhhhh---hccccccc
Q 021469 80 TILMCFLRKEEDKGEK--ETADASVNFYSYLVSLSKSITTLLADVRM----LLIIPLFAYSGLQQAFVW---AEFTKEIV 150 (312)
Q Consensus 80 ~~l~lfL~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~----lll~p~~~~~G~~~~f~~---~~~~~~~~ 150 (312)
.++++|+++|++..++ |+.++......+.++++ ..+.|+|.. +..+-..+-+|- .++|. ..+.+.+.
T Consensus 203 ~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl---~~l~~~~v~v~~sl~~~a~~fv~Gs-~sww~p~~~~~~~~~~ 278 (493)
T KOG1330|consen 203 LLVFLFVREPERGARDEVDGENKMVKPFTSVWKDL---KVLAKIKVFVLSSLGIIAAQFVIGS-LSWWAPAFIYYSYELI 278 (493)
T ss_pred HHHHhhccCcccccccccccCCcCCCCccchHHHH---HHHHccCceeeehHHHHHHHHhccc-cchhhhhHHHHHHHHh
Confidence 5557888888864332 22221112233444444 444444432 333334444442 12221 11222222
Q ss_pred ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCC
Q 021469 151 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 184 (312)
Q Consensus 151 s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~ 184 (312)
.+.-+.+ -+...+.-.++++|.+++|.++||+
T Consensus 279 ~~~~~~~--~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 279 GFDHNAT--LIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred CCccccc--hhhhhHHHhhchhhheehHHHHHHH
Confidence 1110111 1222344556788888888888873
No 223
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.28 E-value=0.026 Score=53.88 Aligned_cols=117 Identities=12% Similarity=0.096 Sum_probs=63.3
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhH-HHHHHHHHH-HHHHHHHhcccC-CCCCCCchHHHHHHHHHHhhh
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI-VSGGAIAQV-VVFLWILINYSV-TSGVLGTLYPLIMAALLGIGD 232 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G~~d 232 (312)
-+++|.+..+..+...+.+.+.|.+.||.+.|+.+ ..++.+... +.+. .+...|- ..+. ...+.+.+..+|++-
T Consensus 42 ~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff-~~v~~pll~~n~--~lg~iig~i~l~~~f 118 (412)
T PF01306_consen 42 GTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF-IYVFGPLLQSNF--WLGAIIGGIYLGLVF 118 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH-HHTHHHHHHTT---HHHHHHTTTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 35789999999999999999999999998754444 333332221 2222 1111110 0000 011222233334332
Q ss_pred hHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 233 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..-....-++..... .+..--++=-|.|-|+|.+++-.+.+.+
T Consensus 119 ~~~~~~~Ea~~er~s-r~~~feYG~~R~wGSig~ai~s~~~G~L 161 (412)
T PF01306_consen 119 NAGVPLSEAYAERVS-RRNGFEYGRARMWGSIGFAIASLLAGIL 161 (412)
T ss_dssp TTHHHHHHHHHHHHH-HHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHH-HHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence 222222222222211 1122348889999999999999998875
No 224
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.16 E-value=1.5 Score=43.11 Aligned_cols=81 Identities=7% Similarity=-0.026 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHh--cccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHH-HHHH
Q 021469 191 VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQ-CASI 266 (312)
Q Consensus 191 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~q-s~g~ 266 (312)
+.+|.++...+|..+.+ ....+.....++|..+.+++.++|+-+....-.+.++++.|++- .+.++++-+.. ++|.
T Consensus 348 fa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~ 427 (493)
T PRK15462 348 FALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN 427 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 67788777777765432 12211112334667888999999999999999999999998755 57888885533 4555
Q ss_pred HHHHH
Q 021469 267 AVVFF 271 (312)
Q Consensus 267 ai~f~ 271 (312)
.++-.
T Consensus 428 ~~~g~ 432 (493)
T PRK15462 428 YLAGV 432 (493)
T ss_pred HHHHH
Confidence 55433
No 225
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.96 E-value=0.06 Score=51.77 Aligned_cols=140 Identities=16% Similarity=0.017 Sum_probs=82.8
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 239 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~ 239 (312)
+.+-+..-+++++|.++.|++.||+|||+ ++....++.+++-+.+-.....+++..-.++.++.-+++|+|-+.=...-
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~-vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKK-VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchh-hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 44555667889999999999999999875 44444433333322111111112221112356777888899877766655
Q ss_pred HhHHHHhccCCh-----hhhHHHHHHHHHHHHHHHHHhhhh-------------hhHHHHHHHHHHHHHHHHHHHHHhh
Q 021469 240 SALLGILFKHDT-----EGAFAQLKVWQCASIAVVFFIGPY-------------ISLQAMLIVMVVGICVALVGILFLT 300 (312)
Q Consensus 240 ~~i~g~~~~~~~-----~~afa~~~~~qs~g~ai~f~~~~~-------------l~~~~~~~il~~~~~~~~~~~~~~~ 300 (312)
..+.++..++++ +..|+.-.+-.-+|..++..+... +...|.+.+.++.+-...+.|+.+.
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~ 244 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLK 244 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 555555555444 234666666566666666655432 2345677777777777777777664
No 226
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.95 E-value=0.14 Score=49.97 Aligned_cols=116 Identities=19% Similarity=0.128 Sum_probs=81.2
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCC-hhhHHHHHHHHHHHH-HHHHHhcccCCCCCCCchHHHHHHHHHHhhhh
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDG 233 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~ 233 (312)
.+-.|.+.+..++++.+++.+.|.-..|.++ |+|++ .+.++++++ .+...+.+.|+. . -++.++..++.|+|-+
T Consensus 70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli-~s~ii~~~g~llY~~l~~~~~~-~--~y~mL~~R~l~Gvg~~ 145 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI-VSFLIAIIGNLLYLALAYVPNG-V--KYLMLVARILTGVGVG 145 (488)
T ss_pred cchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH-HHHHHHHHHHHHHHHHHhcccc-h--HHHHHHHHHHcCcCcc
Confidence 4557999999999999999999988877653 55664 555555433 333223444442 1 2467788999999987
Q ss_pred HHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 234 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 234 ~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
..-...-.+-..-.++|+.+|++....-+.+|..++-.+++.
T Consensus 146 n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 146 NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 766666555555567778789998888888888777776653
No 227
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.91 E-value=0.096 Score=51.39 Aligned_cols=148 Identities=14% Similarity=0.047 Sum_probs=89.5
Q ss_pred cChhhHHHHHHHHhhhhHhhhhhhcccccccc---cc--cccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHH
Q 021469 120 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT---PA--LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 194 (312)
Q Consensus 120 ~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s---~~--lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~ 194 (312)
+.|-.+.++|++.+.-+...--..-..++.+. .- ++-+..+.+-..+-++-+++-+..|.|.||++-.+.+...+
T Consensus 39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~ 118 (495)
T KOG2533|consen 39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG 118 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence 33444677777666554432221111111111 00 12234566667778888899999999999997332222222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhh
Q 021469 195 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~ 273 (312)
++-.+.++.- .+..+ .+...++-+++|+..++.-...-.++|..|.+++ ...++++...+++|..++-.++
T Consensus 119 ~~w~~~~~~~---~~~~s-----~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA 190 (495)
T KOG2533|consen 119 ILWGLFGFLT---AAVHS-----FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIA 190 (495)
T ss_pred HHHHHHHHHH---HHHhh-----hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHH
Confidence 2111111111 11111 1346788999999999999999999999997544 5679999988887777777776
Q ss_pred hh
Q 021469 274 PY 275 (312)
Q Consensus 274 ~~ 275 (312)
..
T Consensus 191 ~g 192 (495)
T KOG2533|consen 191 YG 192 (495)
T ss_pred HH
Confidence 65
No 228
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.88 E-value=1.5 Score=40.92 Aligned_cols=109 Identities=14% Similarity=-0.006 Sum_probs=62.3
Q ss_pred ccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhH
Q 021469 155 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 155 g~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~ 234 (312)
..++++....+--.+..+.+.+.|.+.||+|||+ ..++-++++...-++ ...++ .+..++--++-|++.+.
T Consensus 67 ~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-~cl~~cily~~scl~---k~~~~-----~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 67 SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK-ACLLFCILYSLSCLT---KHSSN-----YPVLLLGRVLGGIATSL 137 (354)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHH---Hhccc-----cHHHHHHHHHHHHHHHH
Confidence 3456777776666778888899999999999876 333444444433222 11122 23455556888888877
Q ss_pred HhhhhH-hHHHHhc----cCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469 235 LNTQLS-ALLGILF----KHDT-EGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 235 ~~t~~~-~i~g~~~----~~~~-~~afa~~~~~qs~g~ai~f~~ 272 (312)
..+.-- |++.+.- |++. ...|+..-++.+-..+|+-++
T Consensus 138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv 181 (354)
T PF05631_consen 138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGV 181 (354)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhH
Confidence 766553 5565542 2222 234554444434334444433
No 229
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=95.72 E-value=1 Score=42.23 Aligned_cols=141 Identities=9% Similarity=0.026 Sum_probs=63.3
Q ss_pred HHHHHHhhhhHhhhhhhcccccccccccccchhhHH--HHHHhHHHHHHHHHHhh-hhcCCCChhhHHHHHHHHHH-HHH
Q 021469 127 IIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGA--MAVYGAFDAICSLAAGR-LTTGLPSITFIVSGGAIAQV-VVF 202 (312)
Q Consensus 127 l~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v--~~~~g~~~~ig~~~~G~-l~d~~~~~~~~~~~~~~~~~-~~~ 202 (312)
+.-+.+..|+..++.....|.-+-+..+..+.+|.. +....+...+.+.+.++ ..||.+||+..++...++.. ...
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~ 85 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLA 85 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHH
Confidence 333445556655555433332221122234567775 34456667677766644 67788766543222211111 111
Q ss_pred HHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 203 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
.+. ...+... +..+........++..+........+..+.. +++..+..+..+..|..+++.+++
T Consensus 86 ~~~--~~~~~~~--~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~---~~~~~~~~~~~~~~g~~lG~~~g~ 150 (390)
T TIGR02718 86 SLA--LVGPDVA--GAGWAVGLLACASLASATQDIATDGMAAEHF---NGRTLAKGNAVQIAGVMIGFFGGG 150 (390)
T ss_pred HHH--cCCcchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHhhhhHHHHHHHHHHHHHHHHHH
Confidence 111 1222211 0112233333334444443333333333322 233445556666667777776665
No 230
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.72 E-value=0.72 Score=43.99 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 219 LYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
++.+++.+.-|+..+......+..+.+..+ +++|-+.+.--.-.++|.+++-.++-.+
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 567888888899777777777777777654 5668889999998888888887766543
No 231
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.71 E-value=0.38 Score=47.04 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=69.7
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 239 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~ 239 (312)
..+..++.++.++|+++.|.+.||+|||. .+.+..++...+-.........+. +....+--++.|+.-+......
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~-~l~~~~~l~~~~~~~~~~s~~~~~----~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKN-ALLLSNLLAVLAALLMGLSKSAPS----FEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHhHHHHHHH
Confidence 34456788999999999999999999885 434444444333222222221111 1245666778888888888888
Q ss_pred HhHHHHhccCChh-hhHHHHHHHHHHHHHHHHHh
Q 021469 240 SALLGILFKHDTE-GAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 240 ~~i~g~~~~~~~~-~afa~~~~~qs~g~ai~f~~ 272 (312)
.-.+++..|++.. ..-......-++|.-+++.+
T Consensus 138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 8888899997664 34445566666666666544
No 232
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.68 E-value=0.18 Score=47.28 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHh-cccCCCC-CCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC-h---hhhHHHHHHHHHH
Q 021469 191 VSGGAIAQVVVFLWILI-NYSVTSG-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-T---EGAFAQLKVWQCA 264 (312)
Q Consensus 191 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~-~---~~afa~~~~~qs~ 264 (312)
++++.++.+.+.+++.+ ..++..+ -......++-.++.++|.+.....+..+.++.|+++ + ++.|..+.+.-++
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 45666666656554322 2332211 111235667677899999999999999999999765 2 4789999999999
Q ss_pred HHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 021469 265 SIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLTIQVEKA 306 (312)
Q Consensus 265 g~ai~f~~~~~l~----~~~~~~il~~~~~~~~~~~~~~~~~~~~~ 306 (312)
|+.++....+++. ....+.+-.+..+++++.|..-..+++++
T Consensus 84 G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 84 GSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 9999999888764 44455555567777777776665555554
No 233
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.64 E-value=2.5 Score=41.49 Aligned_cols=108 Identities=7% Similarity=-0.115 Sum_probs=59.8
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchH-HHHHHHHHHhhhhHHhhhh
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY-PLIMAALLGIGDGVLNTQL 239 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~~d~~~~t~~ 239 (312)
......+..+..+....+++.|+++||. ....+..+...+.++.. ..+.+.+ .++ ..+..+.-+...++++..
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~-~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~- 427 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRP-PLFLSLFLAGIGLLLFG-WLPDDLG---GWLHWILPLLGKFFIGSAFNLI- 427 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH-Hhhccch---hHHHHHHHHHHHHHHHHHHHHH-
Confidence 3344566688888888889999998765 43444444433333222 1221211 012 222233333344444444
Q ss_pred HhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469 240 SALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 240 ~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+....+++|+.. ..+.+....+-.+|+.++-.+..
T Consensus 428 ~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~ 463 (521)
T KOG0255|consen 428 FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPL 463 (521)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888898754 45677777776667666665543
No 234
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=95.19 E-value=0.13 Score=50.82 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=79.8
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
++++++..+......+.+.+.+-+.||++.|. ++++|.++...++++.. |..+- +.+.+..+++-|+|-+...
T Consensus 81 ~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~-v~i~G~~v~~~g~~lss--F~~~i----~~l~lt~gvi~G~G~~~~~ 153 (509)
T KOG2504|consen 81 SQIAWIGSLLLGVYLLAGPLVSALCNRFGCRT-VMIAGGLVAALGLLLSS--FATSL----WQLYLTFGVIGGLGLGLIY 153 (509)
T ss_pred cHHHHHHHHHHHHHHHhccHHHHHHhhcCchH-HHHHHHHHHHHHHHHHH--HHhhH----HHHHHHHHHHhhccchhhh
Confidence 34667776666677777888888899999875 66788888777766543 22220 1246778899999999988
Q ss_pred hhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
+-.-.+++.+|++++..|.++...-.++|..+-=.+...
T Consensus 154 ~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 154 LPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred cchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 888899999999888878777776555555444444333
No 235
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.09 E-value=1.9 Score=42.24 Aligned_cols=112 Identities=13% Similarity=-0.023 Sum_probs=61.6
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHH-HHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG-GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
..+++..+.++.+++-+.+.|-+.|+-++|++.+.. +.+..+.+..+.+ .+|+. +++..++.++--++...-+
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~--v~~~~----~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF--VSPGQ----WWLALVLFIIANVGYEASN 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH--hCcch----HHHHHHHHHHHHHHHHHHH
Confidence 456777778888999999999999987666544332 2223233333222 23331 1223333333334444445
Q ss_pred hhhHhHHHHhccCCh---------------------------hhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 237 TQLSALLGILFKHDT---------------------------EGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 237 t~~~~i~g~~~~~~~---------------------------~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
..-++.+-++.++++ .+..+.-..+..+|..+...++-.
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 555555556654333 245556666666777776666543
No 236
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.97 E-value=0.023 Score=54.45 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=75.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcC----CCChhhHHHHHHHHHHHHHHHHHhcccC--------CCCCCCc--h--H
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSV--------TSGVLGT--L--Y 220 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~--~ 220 (312)
++.+.+-.+-.+...+..-+.|..+|| +|||||.+..+.........++ -|.+ ++..... . +
T Consensus 67 k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li--g~aaDig~~lgd~~~~~~~~rai~~ 144 (498)
T KOG0637|consen 67 KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI--GYAADIGLLLGDNERKPVKPRAIVL 144 (498)
T ss_pred ccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh--hhHhhhhHHhcCCcccccchHHHHH
Confidence 344455556666677777788889994 7888887766665544443322 1211 1111011 1 1
Q ss_pred HHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChh-hhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 221 PLIMAALLGIGDGVLNTQLSALLGILFK-HDTE-GAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 221 ~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~-~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
..+-.-++=++....|.-+-+.+.++.. |++. +|.+.+-++.++|.+++|...++.
T Consensus 145 ~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 145 FILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 2233445556666777788889999874 4443 499999999999999999998754
No 237
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.83 E-value=0.0077 Score=59.75 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=0.0
Q ss_pred eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCC-C--CcC-------C-CC-----chhhHH
Q 021469 7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-K--GGS-------T-SG-----TTLLFI 70 (312)
Q Consensus 7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~-~--~~~-------~-~~-----~~~~~~ 70 (312)
+|+.++.++ ++-+.|.|+.++...+|..+|=++....++.. | ..+ . +. .+.=|+
T Consensus 164 tYiDDnv~~----------~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfl 233 (539)
T PF03137_consen 164 TYIDDNVSK----------KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFL 233 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeecccccc----------ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHH
Confidence 799998876 57889999999999999999988876665421 1 100 0 11 123355
Q ss_pred HHHHHHHHHHHHHHhccCCcccc-----cc-----chhh-----cchhh-----hhHHHHHHHHHHHhhcChhhHHHHH
Q 021469 71 VFLGVITLGTILMCFLRKEEDKG-----EK-----ETAD-----ASVNF-----YSYLVSLSKSITTLLADVRMLLIIP 129 (312)
Q Consensus 71 if~~i~~~g~~l~lfL~~~~~~~-----~~-----~~~~-----~~~~~-----~~s~~~~~~~~~~~~~~~~~lll~p 129 (312)
+..++.++..+.+++.|+.-+.. ++ +.++ .+.++ ....++-.+.+.++++||-..+..-
T Consensus 234 i~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l 312 (539)
T PF03137_consen 234 ICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL 312 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence 56565666665566666421111 00 0000 00000 1345666677777888887755544
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.81 E-value=1.7 Score=42.21 Aligned_cols=114 Identities=9% Similarity=0.084 Sum_probs=60.4
Q ss_pred chhhHHHHHHhHHHHHHHHHHhhhhcCCC----ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhh
Q 021469 157 SGVGGAMAVYGAFDAICSLAAGRLTTGLP----SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 232 (312)
Q Consensus 157 ~~~g~v~~~~g~~~~ig~~~~G~l~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d 232 (312)
..++....+..+.-.+-.+ .|.+.||++ ||++.++++.++.. +..+..+..+++ . .....+..++-+++-
T Consensus 61 ~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~-~~~~~~l~~~~~--~--~~~~~~~~~l~~~~~ 134 (468)
T TIGR00788 61 ARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGS-AILYGLLPGKVS--S--AKVAAAFIFLAALAK 134 (468)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHH-HHHHHhcccccc--h--HHHHHHHHHHHHHHH
Confidence 3455555556666666555 899999884 34555555555542 111122222222 1 112333455566666
Q ss_pred hHHhhhhHhHHHHhccCChhh---hHHHHHHHHHHHHHHHHHhhhhh
Q 021469 233 GVLNTQLSALLGILFKHDTEG---AFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 233 ~~~~t~~~~i~g~~~~~~~~~---afa~~~~~qs~g~ai~f~~~~~l 276 (312)
+......-.+..+..+++.+. ..+......++|..++-.++..+
T Consensus 135 a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 135 ALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 666666667777766643321 23333333557777777776654
No 239
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=94.35 E-value=4.6 Score=37.90 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=85.0
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 236 (312)
+.|.+-++.-+.++++++..|.+.-++.|. ..++.++...+.++..++ .+..+ -|++|+.+++++......-
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m--~~t~~-----Iw~~Ya~yvlfr~~y~l~i 344 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM--AQTQH-----IWVCYAGYVLFRVIYQLTI 344 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh--hcccc-----eehhhhhHHHHHhhHhhhh
Confidence 456666777777888999999986444432 334555655555543332 23222 3678999999988887777
Q ss_pred hhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHhhh-----hhhHHH-------HHHHHHHHHHHHHHHHHHhhhhh
Q 021469 237 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP-----YISLQA-------MLIVMVVGICVALVGILFLTIQV 303 (312)
Q Consensus 237 t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~~~-----~l~~~~-------~~~il~~~~~~~~~~~~~~~~~~ 303 (312)
|....-++.--+++. .-.|++.-++--+-+++-..+-. .++... ++.++.++.+++.........|.
T Consensus 345 tiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~ 424 (433)
T KOG3810|consen 345 TIATFQIARNLSSELFGLVFGINTFVALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRN 424 (433)
T ss_pred hHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcC
Confidence 777666666444333 56788777764444444433211 122222 24444455555555555555666
Q ss_pred hhccCCC
Q 021469 304 EKAFYSP 310 (312)
Q Consensus 304 ~~~~~~~ 310 (312)
+++++|+
T Consensus 425 ~~~~~~~ 431 (433)
T KOG3810|consen 425 KVPQENS 431 (433)
T ss_pred CCCCCCC
Confidence 6665554
No 240
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.24 E-value=5.9 Score=38.74 Aligned_cols=156 Identities=10% Similarity=-0.006 Sum_probs=75.7
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCC-ch-----hhHHHHHHHHHHHHHHHHhccCCc-cccc---c
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSG-TT-----LLFIVFLGVITLGTILMCFLRKEE-DKGE---K 95 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~-~~-----~~~~if~~i~~~g~~l~lfL~~~~-~~~~---~ 95 (312)
++-.|+++++-..-++|.++|+.+...+-+..+..+.+. .. .+..+-.++..+...+...+.+.. ..++ +
T Consensus 161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 240 (472)
T TIGR00769 161 DEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNP 240 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccch
Confidence 566799999999999999999977655542222111111 11 122222222222222233332211 1110 0
Q ss_pred chhhcchhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhcccccc---cccccc-cchhhHHHHHHhHHH
Q 021469 96 ETADASVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI---VTPALG-VSGVGGAMAVYGAFD 170 (312)
Q Consensus 96 ~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~---~s~~lg-~~~~g~v~~~~g~~~ 170 (312)
++++.+.+++.+++| .+| ++++|-++.+.-+.+..|....+...++-+.+ ..+.-. .+..|-.-..-|+..
T Consensus 241 ~~~~~k~k~k~~~~e----s~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~t 316 (472)
T TIGR00769 241 ALKEKKVKPKMSTME----SLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVS 316 (472)
T ss_pred hhccccCCCCCCHHH----HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 001111111233444 444 47788888877777777766666543221111 011000 112333444556666
Q ss_pred HHHHHHHhhhhcCCC
Q 021469 171 AICSLAAGRLTTGLP 185 (312)
Q Consensus 171 ~ig~~~~G~l~d~~~ 185 (312)
.+..++.+++.+|+|
T Consensus 317 l~~~l~~~~l~~~~G 331 (472)
T TIGR00769 317 VTMMLLSGNVIRKYG 331 (472)
T ss_pred HHHHHHHHHHHHHhh
Confidence 666667788888776
No 241
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.10 E-value=6 Score=38.27 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=61.1
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCC-h-hhHH--HHHHHHHHHHHHHHHhcccCCC--C--CCCchHHHHHHHHHHhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPS-I-TFIV--SGGAIAQVVVFLWILINYSVTS--G--VLGTLYPLIMAALLGIG 231 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~G~~ 231 (312)
-....+|.++..+|-.+..+.. +++ | +.+. .++-++.+-.|. +++.+|+. | ..+.+++++..+++|+.
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~--~p~~~~~~l~i~s~~R~iFIPlf~--lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM--WPDEDSRWLPILSFLRVLFIPLFL--LCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE--eeCCCccchHHHHHHHHHHHHHHH--HhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 3455678888888777554331 221 2 1232 122223232232 23444322 1 12236788899999999
Q ss_pred hhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhh
Q 021469 232 DGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.+..-+.......+.-+ +++|.+-.+..+...+|.+++-.++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887776654444433 3345666777777777777666554
No 242
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.04 E-value=2.3 Score=41.07 Aligned_cols=117 Identities=11% Similarity=0.079 Sum_probs=68.9
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH-HHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
.-+...+|.+..+.-++..-+++|++|-|. ...++.++..+ +++=+...+|.-++...-.+.+.-..+-+...-....
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~-a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~ 159 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRT-ALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG 159 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchHH-HHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc
Confidence 345556788889999999999999998775 44677777653 3332211222111110001344444455555544444
Q ss_pred hhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 238 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 238 ~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
...-+-+..|+++ +..|-++--+-.-+|.++++.+.|.+
T Consensus 160 lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 160 LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 4344445556543 34566666666669999999998865
No 243
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.01 E-value=0.35 Score=47.16 Aligned_cols=38 Identities=21% Similarity=0.145 Sum_probs=29.3
Q ss_pred eeecccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhh
Q 021469 7 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 54 (312)
Q Consensus 7 ~Ylt~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~ 54 (312)
+|++.+|.. ++|-|.++..-.-+-+|.++|..+..++-
T Consensus 152 ~Y~a~~s~~----------~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 152 AYIADASTV----------EDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHhccCc----------cchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 566666654 78899999888888899999988876553
No 244
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.99 E-value=0.2 Score=36.10 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=31.2
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 191 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~ 191 (312)
..++|.++.+-.+.+.+++.+.|.+.||.++++.+.
T Consensus 34 ~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 467899999999999999999999999998765443
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=93.70 E-value=1.6 Score=42.63 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=75.9
Q ss_pred cChhhHHHHHHHHhhhhHhhhhhhcccccc--cccccccc---hhhHHHHH----HhHHHHHHHHHHhhhhcCCCChhhH
Q 021469 120 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEI--VTPALGVS---GVGGAMAV----YGAFDAICSLAAGRLTTGLPSITFI 190 (312)
Q Consensus 120 ~~~~~lll~p~~~~~G~~~~f~~~~~~~~~--~s~~lg~~---~~g~v~~~----~g~~~~ig~~~~G~l~d~~~~~~~~ 190 (312)
...+++.+.|..+...+.........+... ..|+.+.+ ..+..... .|+...+.+...|-++||+|||.++
T Consensus 16 ~~~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L 95 (463)
T KOG2816|consen 16 RLASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVL 95 (463)
T ss_pred ccchhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhH
Confidence 344456666666665555444433222211 24444332 12333333 3778899999999999999987544
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHH
Q 021469 191 VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVV 269 (312)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~ 269 (312)
.+--....+......+.. ++.+++.-+.| +.++......+..++...+ ++....++....-.++.+++
T Consensus 96 ~~~~~~~~l~~~~~~~~~----------~~~~~~~~l~g-~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~ 164 (463)
T KOG2816|consen 96 LLPLFGTILPALCLLFQG----------YWFFLLLGLSG-GFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG 164 (463)
T ss_pred HHHHHHHHHhHHHHHHHH----------HHHhhhccccc-chhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH
Confidence 221111111122222211 22333222222 2333345555566665543 33467888888778888888
Q ss_pred HHhhhhh
Q 021469 270 FFIGPYI 276 (312)
Q Consensus 270 f~~~~~l 276 (312)
...+..+
T Consensus 165 p~~~~~~ 171 (463)
T KOG2816|consen 165 PALGGYL 171 (463)
T ss_pred HHHHHHH
Confidence 8887764
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.35 E-value=9.2 Score=37.97 Aligned_cols=184 Identities=14% Similarity=0.189 Sum_probs=105.6
Q ss_pred HHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhc---ccccccccccccc-hhhHHHHHHhHHHHHHHHHHhhhhcCCC
Q 021469 110 SLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE---FTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLP 185 (312)
Q Consensus 110 ~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~---~~~~~~s~~lg~~-~~g~v~~~~g~~~~ig~~~~G~l~d~~~ 185 (312)
...+...|++.+++.++++...+..|...++..+. ..+.+. |.+ --|.+-+.--.+|++.=++.+|+++|+|
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~----~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiG 434 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLG----GIKTLFGVVSALCHAGEILFYFFSFKLIEKIG 434 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcC----CcceeeeehhhhhccchHHHHHHHHHHHHHhc
Confidence 33444558999999998888888888877776542 111110 100 0122223333468888888899999998
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhhHHHHHH-HHH
Q 021469 186 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV-WQC 263 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~afa~~~~-~qs 263 (312)
+-+ ++.+++....+=|+.. .+-.+ +|....+=++-|+..+..-..+-+.+....|.+- +.+-++.+. +..
T Consensus 435 Hv~-v~~lgLa~~~~Rf~~~--S~L~n-----~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 435 HVN-VMYLGLACNVGRFLYY--SYLQN-----PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHG 506 (618)
T ss_pred ccc-eeeehhhHHHHHHHHH--HHhcC-----chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcc
Confidence 543 5556655555444432 22112 2445666777777777666666666767666433 344444443 344
Q ss_pred HHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469 264 ASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVEK 305 (312)
Q Consensus 264 ~g~ai~f~~~~~----l~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 305 (312)
+|-.++-++... +...+.+.+..+-+++.++.+..+-++.+|
T Consensus 507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 455555555443 344455555555566666666666666554
No 247
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.18 E-value=1.4 Score=36.35 Aligned_cols=87 Identities=18% Similarity=0.114 Sum_probs=53.3
Q ss_pred HHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC
Q 021469 170 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 249 (312)
Q Consensus 170 ~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~ 249 (312)
-.+++++...+.++++.|. .++++.+... .+...+ .+ |+ .+..+..+++.|++.+..-+-.-..+....++
T Consensus 50 ~~~s~l~~P~iv~~lg~K~-sm~lg~~~y~-~y~~~~-~~-~~-----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKW-SMILGSLGYA-IYIASF-FY-PN-----SYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHhHHHHHHHHhhHH-HHHHHHHHHH-HHHHHH-Hh-hh-----HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 4556666677777787664 5556665554 334333 23 33 24678899999999998877777677665543
Q ss_pred -ChhhhHHHHHHHHHHH
Q 021469 250 -DTEGAFAQLKVWQCAS 265 (312)
Q Consensus 250 -~~~~afa~~~~~qs~g 265 (312)
+.++..+++-.+...+
T Consensus 121 ~~~~~~~~ifw~i~~~s 137 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSS 137 (156)
T ss_pred HHHhhHHHHHHHHHHHH
Confidence 3345555544444333
No 248
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=93.18 E-value=4 Score=38.45 Aligned_cols=135 Identities=14% Similarity=0.014 Sum_probs=89.1
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 238 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~ 238 (312)
.|.....=-++-.+.+.+..+|.+|++..+ .+..+.++....- +...+.+ .+..|.-..+-|.+-++.|..
T Consensus 49 aGlLTtLPll~fg~~ap~a~~Lar~~g~er-~l~~~Llli~~G~--~iR~~~~------~~~L~~gt~l~G~gIav~nVL 119 (395)
T COG2807 49 AGLLTTLPLLAFGLFAPAAPRLARRFGEER-SLFLALLLIAAGI--LIRSLGG------LPLLFLGTLLAGAGIAVINVL 119 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhHH-HHHHHHHHHHHHH--HHHhccc------HHHHHHHHHHHHhhHHHHHHh
Confidence 344443334444556667778888887544 3334443333221 1112221 135788899999999999999
Q ss_pred hHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHhhhh
Q 021469 239 LSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGILFLTIQ 302 (312)
Q Consensus 239 ~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~~l~-----~~~~~~il~~~~~~~~~~~~~~~~~ 302 (312)
+++++=..||++.....++|....++|++.+-..+..+. .+.-+.+-....+++.+.++.-..|
T Consensus 120 LPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r 188 (395)
T COG2807 120 LPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALR 188 (395)
T ss_pred hhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 999999999998888999999999999999998887652 2223444445666666666665433
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=93.11 E-value=0.039 Score=53.07 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.6
Q ss_pred CcCceeechhhHHHHHHHHhHhhhhHHhhHhhc
Q 021469 23 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 55 (312)
Q Consensus 23 ~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~ 55 (312)
+.+++||.+.+..+++...+.+.|++++..+..
T Consensus 173 an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~ 205 (538)
T KOG0252|consen 173 ANKKTRGAFIAAVFAMQGFGILAGGIVALIVSA 205 (538)
T ss_pred hhhccccceeEEEEEecchhHhhccHHHHHHHH
Confidence 345799999999999999999999999877653
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=93.06 E-value=0.0038 Score=59.85 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=79.1
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 238 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~ 238 (312)
.+.+....-++..+|+++.|.+.||+|||+ .+.++.++..++.++. .+.++. .+++...+.-++.|++-+...+.
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~-~~~~~~~~~~i~~~~~--~~~~~~--~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKP-ALIISALLMIIGSILI--AFAPSY--NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccc-cccccccccccccccc--cccccc--ccccccccccccccccccccccc
Confidence 455666777889999999999999999875 4455555554443332 233311 01234566778899999998899
Q ss_pred hHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 239 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 239 ~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
...++.+..|++ +....++......+|..++..+....
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc
Confidence 888888887654 45667788888888888887776543
No 251
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.99 E-value=1.6 Score=42.81 Aligned_cols=155 Identities=14% Similarity=0.007 Sum_probs=80.3
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhc-CCCCc---CCCCchhhHHHHHHHHHHHHHHHH---hccC-----Ccccc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGG---STSGTTLLFIVFLGVITLGTILMC---FLRK-----EEDKG 93 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~-~~~~~---~~~~~~~~~~if~~i~~~g~~l~l---fL~~-----~~~~~ 93 (312)
++-.|+.+.+-..-|.|.++||-....+.+ ..+.. .+.....+-..+..+.+.|.++.. .+.+ |+..
T Consensus 176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~- 254 (491)
T PF03219_consen 176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY- 254 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-
Confidence 456799999999999999999987766554 11110 011111232333334444443332 2321 2211
Q ss_pred ccchhhcchhhhhHHHHHHHHHHH-hhcChhhHHHHHHHHhhhhHhhhhhhccc----ccccccccccchhhHHHHHHhH
Q 021469 94 EKETADASVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFT----KEIVTPALGVSGVGGAMAVYGA 168 (312)
Q Consensus 94 ~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~lll~p~~~~~G~~~~f~~~~~~----~~~~s~~lg~~~~g~v~~~~g~ 168 (312)
+++.++.+.+++.+++| .++ ++++|-++.+.-+.+..|+.....-..+- ..+.++.--.+..|-.....|+
T Consensus 255 ~~~~~~kk~k~k~s~~e----s~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGi 330 (491)
T PF03219_consen 255 PSAKKKKKKKPKMSLKE----SFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGI 330 (491)
T ss_pred hhhhcccccCCCccHHH----HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 11111112223334444 444 46788888887777777766554432111 1111110001234555556777
Q ss_pred HHHHHHHHHhhhhcCCC
Q 021469 169 FDAICSLAAGRLTTGLP 185 (312)
Q Consensus 169 ~~~ig~~~~G~l~d~~~ 185 (312)
..++..++++.+.+|+|
T Consensus 331 vtii~~~l~~~iir~~G 347 (491)
T PF03219_consen 331 VTIIMMFLSSNIIRRFG 347 (491)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 77888888888888766
No 252
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.52 E-value=14 Score=35.73 Aligned_cols=251 Identities=10% Similarity=0.070 Sum_probs=120.8
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHH-HHhccC-----Cc-----cc
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRK-----EE-----DK 92 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l-~lfL~~-----~~-----~~ 92 (312)
+++...+.++..=-+=+.+.++|.++...+....+. ..-.++..+.+.++.+. ..++.. |+ ++
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~------~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~ 216 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASP------VIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRS 216 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCC
Confidence 445677788877777789999999888777653321 23344556666666655 334421 11 11
Q ss_pred cccc-hhhc----chhhhhHHHHHHHHHHHh-hcChhhHHHHHHHHhhhhHhhhhh------hccccccc-ccccccchh
Q 021469 93 GEKE-TADA----SVNFYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAFVW------AEFTKEIV-TPALGVSGV 159 (312)
Q Consensus 93 ~~~~-~~~~----~~~~~~s~~~~~~~~~~~-~~~~~~lll~p~~~~~G~~~~f~~------~~~~~~~~-s~~lg~~~~ 159 (312)
++++ .++. +..+.....+.+++.++. ..+++.-.==|.+ ..++..++.+ +.-..++. +..+....+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vf-las~alalLY~TVLsf~~lmt~yl~~~G~s~~~i 295 (432)
T PF06963_consen 217 SESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVF-LASFALALLYFTVLSFGGLMTAYLKSQGYSPSVI 295 (432)
T ss_pred ccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHH-HHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHH
Confidence 1111 1000 011112223333333332 2333322111111 1111111110 11111111 121222346
Q ss_pred hHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCC-CCchHHHHH------HHHHHhh
Q 021469 160 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGV-LGTLYPLIM------AALLGIG 231 (312)
Q Consensus 160 g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~------~~l~G~~ 231 (312)
|..-..-.+.++.|.++..++.+|+|..+ .=..+...+..+...... .|.+.++. ......++. ..+|++
T Consensus 296 gi~R~~gav~Gl~gT~~~p~l~~riGlvr-~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~f- 373 (432)
T PF06963_consen 296 GIFRGLGAVFGLLGTWVYPWLMKRIGLVR-AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSF- 373 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchh-hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhh-
Confidence 66666677778889999999989987533 223455556555443321 34444331 001111111 124443
Q ss_pred hhHHhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 021469 232 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVV 287 (312)
Q Consensus 232 d~~~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~ 287 (312)
|=+- .-++.+.-|++ +...+++-.-+|++-..+.|.....++-..++..+..
T Consensus 374 DL~~----~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~ 426 (432)
T PF06963_consen 374 DLAV----TQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVL 426 (432)
T ss_pred hHHH----HHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHH
Confidence 3221 12333344443 3467889999999999999988776655555554443
No 253
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.03 E-value=7.4 Score=33.38 Aligned_cols=111 Identities=23% Similarity=0.190 Sum_probs=66.9
Q ss_pred hhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 158 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 158 ~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
..++.+..+.+...+++.+.|.+.||.+||+ .+..+........... .+.++ ...+...+..+..|++.+....
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-VLIIGLLLFLLGTLLL--ALAPN---VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchH-HHHHHHHHHHHHHHHH--HhCcc---chHHHHHHHHHHHHhhhHHHHH
Confidence 3567777888888888899999999987663 4444443322221111 11112 1123344455558888888888
Q ss_pred hhHhHHHHhccC--ChhhhHHHHHH-HHHHHHHHHHHhhh
Q 021469 238 QLSALLGILFKH--DTEGAFAQLKV-WQCASIAVVFFIGP 274 (312)
Q Consensus 238 ~~~~i~g~~~~~--~~~~afa~~~~-~qs~g~ai~f~~~~ 274 (312)
....++.+.+++ ++....+.... ...+|..++-.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999886 34445555555 35555555544433
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.94 E-value=17 Score=35.63 Aligned_cols=144 Identities=13% Similarity=-0.002 Sum_probs=74.6
Q ss_pred hhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhH-HHHHHHHHHhhhhcCCCChhhHHHHHHHHHHH
Q 021469 122 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 200 (312)
Q Consensus 122 ~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~ 200 (312)
||.+.+..+++..++.+++.......-+++. .|.+.++++=.+.=+ +.++...+.++++++..+++ ++.+.....+.
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~-~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~-vF~~~~~~F~~ 104 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLRSLKDSLVVTR-QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREK-VFYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheEeec-CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHH-HHHHHHHHHHH
Confidence 4567777788888888888865433222221 244444444333333 46777888899998877544 43333333333
Q ss_pred HHHHH-Hhcc------cCCCCC------CCc------------h---HHHHHHHHHHhhhhHHhhhhHhHHHHhccC--C
Q 021469 201 VFLWI-LINY------SVTSGV------LGT------------L---YPLIMAALLGIGDGVLNTQLSALLGILFKH--D 250 (312)
Q Consensus 201 ~~~~~-~~~~------~~~~~~------~~~------------~---~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~--~ 250 (312)
.|++. ++.| |||+.+ .+| | ..|+++=+||- ..-+.+.|-.+..-.+ +
T Consensus 105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgs---lV~S~lFw~faNeitt~~e 181 (509)
T COG3202 105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGS---LVLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhHHH
Confidence 33321 1223 343211 011 1 35566666653 3334455544444322 2
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q 021469 251 TEGAFAQLKVWQCASIAVVF 270 (312)
Q Consensus 251 ~~~afa~~~~~qs~g~ai~f 270 (312)
..+-++++....+++.-++=
T Consensus 182 akRFy~lf~l~~ni~lllsg 201 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSG 201 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 24678887776655544443
No 255
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=90.40 E-value=3.4 Score=39.61 Aligned_cols=113 Identities=15% Similarity=0.038 Sum_probs=66.8
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHH
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 235 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 235 (312)
.+..||.....++..++-+.+.|.+.|+.++|++.+-+.+.+-... ......-++.++ .++..+..++-..+..+-
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~-~~~L~~i~~~s~---~~~~l~~~il~~i~~~~s 132 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIIS-TFLLWFIPPGSY---LLLLLLFLILASIGFEFS 132 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHH-HHHHHHhCCCch---HHHHHHHHHHHHHhcchh
Confidence 4577899999999999999999999999887665543332222211 111112233221 234455666666777777
Q ss_pred hhhhHhHHHHhccCCh-hhhHHHHHHHHHHHHHHHHHh
Q 021469 236 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 236 ~t~~~~i~g~~~~~~~-~~afa~~~~~qs~g~ai~f~~ 272 (312)
|..-++.+-+..++++ .+..+.---.-.+|+.+.+..
T Consensus 133 ~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 133 NVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred heehhhHhhhhcCccccCcccccccccccccchHHHHH
Confidence 7777888888776543 334333333344455554443
No 256
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.01 E-value=7.3 Score=37.18 Aligned_cols=113 Identities=20% Similarity=0.181 Sum_probs=60.1
Q ss_pred hhhHHHHH-HhHHHHHHHHHHhhhhcCCCChh-hHHHHHHHHHHHHHHHHHhcccCCCCC-CCchHHHHHHHHHHhhhhH
Q 021469 158 GVGGAMAV-YGAFDAICSLAAGRLTTGLPSIT-FIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 158 ~~g~v~~~-~g~~~~ig~~~~G~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~d~~ 234 (312)
+.-+.+++ |-+...+|.....++.+. +||. ++..+.-.+.+-.|. .++++|-+.. .+.++..+...++|+..+-
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~--~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFL--LCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHH--HhccCCCCceecCchHHHHHHHHHHhccch
Confidence 34445555 788888886655544332 2232 222222222222222 2467663322 3346788889999998876
Q ss_pred HhhhhHhHHHHhccCC-hhhhHHHHHHHHHHHHHHHHHhh
Q 021469 235 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 235 ~~t~~~~i~g~~~~~~-~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.-+..-...-+..|++ +|.|-.+..++-..|.+.+-.++
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 6554443333333322 24556666777777766665544
No 257
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=89.99 E-value=3.2 Score=37.93 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHhhhhHHhhhhHhHHHHhccC-ChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 219 LYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~-~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
....+..++.|.|-+..|+..+..+..+.++ +.++..+..+.++++|..++=.+.+.
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~ 68 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGS 68 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3567788999999999999999999999765 45678999999999999998887764
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.50 E-value=23 Score=34.90 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=41.5
Q ss_pred ChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhH-HHHHHHHHHhhhhcCCCChhhHHH
Q 021469 121 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVS 192 (312)
Q Consensus 121 ~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~-~~~ig~~~~G~l~d~~~~~~~~~~ 192 (312)
-||.+++.-+++...+.+++....-...+++. .|.+.+.++=...-+ +.++.-++..|+++++++.+ ++.
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~-lFy 93 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREK-LFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-HHH
Confidence 35667777788888888877754322222232 266666555321111 34566677889999987654 443
No 259
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.18 E-value=17 Score=33.11 Aligned_cols=199 Identities=15% Similarity=0.101 Sum_probs=107.8
Q ss_pred hhhHHHHHHHHHHHh-hcChhhHHHHHHHHhhhhHhhhhhh-ccccccc-ccccc--cch--hhHHHHHHhHHHHHHHHH
Q 021469 104 FYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAFVWA-EFTKEIV-TPALG--VSG--VGGAMAVYGAFDAICSLA 176 (312)
Q Consensus 104 ~~~s~~~~~~~~~~~-~~~~~~lll~p~~~~~G~~~~f~~~-~~~~~~~-s~~lg--~~~--~g~v~~~~g~~~~ig~~~ 176 (312)
+.+.+..++|.-.+. ..|.|+.+|-- .|+.+-+ .|+=.+. +.++. .+. -|++.+.+-+.+++|+-+
T Consensus 229 ~~kdlltqf~gaa~aiaSD~ki~LLG~-------iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSl 301 (454)
T KOG4332|consen 229 ENKDLLTQFKGAARAIASDEKIALLGA-------IQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSL 301 (454)
T ss_pred hhHHHHHHhhHhHHHHhcchHHHHHHH-------HHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHH
Confidence 345677788887775 67888876642 2333322 2221111 23332 222 477777888889999999
Q ss_pred HhhhhcCCCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccCCh-hhh
Q 021469 177 AGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGA 254 (312)
Q Consensus 177 ~G~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~-~~a 254 (312)
..++..|-..| .+.+.+.+.+...++.+-.+.....+....+...++..-++-.|-+.+-..+.-+-.++-||.. ...
T Consensus 302 a~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti 381 (454)
T KOG4332|consen 302 ASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI 381 (454)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence 98887653211 1223333333333433222222222222334445555555666666666666667777777644 467
Q ss_pred HHHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHHHHHHHHHHH----HHHHhhhhhhhccCC
Q 021469 255 FAQLKVWQCASIAVVFFI---GPY-ISLQAMLIVMVVGICVALV----GILFLTIQVEKAFYS 309 (312)
Q Consensus 255 fa~~~~~qs~g~ai~f~~---~~~-l~~~~~~~il~~~~~~~~~----~~~~~~~~~~~~~~~ 309 (312)
+..||.=.++-.|+...- +.. ...+....+..+.+.++.+ .+..+|.-.+|++..
T Consensus 382 mNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v~e~d~~~~~~~ 444 (454)
T KOG4332|consen 382 MNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTVVEHDKERRVPW 444 (454)
T ss_pred hhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHhhhccHhhcCCC
Confidence 888888888888877643 111 2334555555555555433 344555555444433
No 260
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=88.91 E-value=8.1 Score=36.82 Aligned_cols=131 Identities=10% Similarity=-0.064 Sum_probs=78.4
Q ss_pred hhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCCCchHHHHHHHHHHhhhhHHhh
Q 021469 159 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNT 237 (312)
Q Consensus 159 ~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t 237 (312)
..++..+.-.+-.+++...|.+.|+++||+ -+.+.++... +..++ ...|+ .....+...+||+|-+. ..
T Consensus 115 ~~llt~~v~~gmllga~~w~l~~d~~grr~-~f~~T~l~t~---v~~~is~~spn-----f~~L~~f~~l~~~g~gg-~p 184 (528)
T KOG0253|consen 115 APLLTLSVFLGMLVGAMVWGLSADTIGRRK-GFNLTFLVTG---VFGVISGASPN-----FASLCVFRALWGFGVGG-LP 184 (528)
T ss_pred hhHHHHHHHhhhhhhhhhhheehhhhhcch-hhhhhHHHHH---HHHHhhcCCCC-----eehhhHHHHHHhccCCC-cc
Confidence 345555566678899999999999999775 3333333322 22222 23333 23456677778887777 56
Q ss_pred hhHhHHHHhccCChh----hhHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 021469 238 QLSALLGILFKHDTE----GAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFL 299 (312)
Q Consensus 238 ~~~~i~g~~~~~~~~----~afa~~~~~qs~g~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~ 299 (312)
+..++.+..-|..+. ..++.+-.-|....+++++.-+.+...+-+.....-+.+...+++|+
T Consensus 185 v~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~ 250 (528)
T KOG0253|consen 185 VDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWV 250 (528)
T ss_pred HhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhc
Confidence 667777776665432 23455555566667777777666666665555554444444444444
No 261
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=88.71 E-value=25 Score=34.39 Aligned_cols=66 Identities=14% Similarity=0.035 Sum_probs=35.6
Q ss_pred hhHHHHHHHHhhhhHhhhhhhccccccccc-ccccchhhHHHHHHhHH-HHHHHHHHhhhhcCCCChh
Q 021469 123 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAF-DAICSLAAGRLTTGLPSIT 188 (312)
Q Consensus 123 ~~lll~p~~~~~G~~~~f~~~~~~~~~~s~-~lg~~~~g~v~~~~g~~-~~ig~~~~G~l~d~~~~~~ 188 (312)
|.+++.-+++...+.+......+....++. .-|.+.+.+.-...-+- .++...+.+++.+|++|++
T Consensus 8 k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~ 75 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEA 75 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 445555566666666666654443333221 12445555544322222 2333677899999998664
No 262
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.63 E-value=26 Score=34.39 Aligned_cols=33 Identities=12% Similarity=-0.086 Sum_probs=28.2
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCC
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 58 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~ 58 (312)
+.-.|+.+.|-.+.|.|.++++.+.....+..+
T Consensus 180 ~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~ 212 (509)
T COG3202 180 EEAKRFYPLFGLGANISLLLSGEVTSWLSKHRD 212 (509)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchh
Confidence 456799999999999999999999888876544
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.33 E-value=12 Score=36.18 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHhhhhHHhhhhHhHHHHhccCC
Q 021469 219 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD 250 (312)
Q Consensus 219 ~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~ 250 (312)
+..+++.++.|++++..|+..+.+.+. +|++
T Consensus 107 ~~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~ 137 (437)
T TIGR00939 107 VTTMASVVIINSGMALLQGSLFGLAGV-FPST 137 (437)
T ss_pred HHHHHHHHHHHhhhhhhcccchhhccc-CCHH
Confidence 356778889999999999999998875 6643
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=87.54 E-value=30 Score=33.93 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=66.4
Q ss_pred HHHHHHHhhhhcCCC-ChhhH-HHHHHHHHHHHHHHHHhc--ccCC-CCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHH
Q 021469 171 AICSLAAGRLTTGLP-SITFI-VSGGAIAQVVVFLWILIN--YSVT-SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGI 245 (312)
Q Consensus 171 ~ig~~~~G~l~d~~~-~~~~~-~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~ 245 (312)
.+.+.+..++.++-+ .+.++ +.++..+....|+.+... +.-+ ++....++....+++.++++=+....--+...+
T Consensus 342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~ 421 (498)
T COG3104 342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK 421 (498)
T ss_pred HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344444555544321 12222 566766666666544322 2222 223334667788999999998888888888888
Q ss_pred hccCCh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021469 246 LFKHDT-EGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 246 ~~~~~~-~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
+-|..- ..+++++-+..++|+.++=-+++
T Consensus 422 laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 422 LAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 887543 57899999998888888777666
No 265
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=87.43 E-value=14 Score=33.19 Aligned_cols=28 Identities=7% Similarity=-0.110 Sum_probs=16.3
Q ss_pred HHHHHHhHHHHHHHHHHhhhhcC-CCChh
Q 021469 161 GAMAVYGAFDAICSLAAGRLTTG-LPSIT 188 (312)
Q Consensus 161 ~v~~~~g~~~~ig~~~~G~l~d~-~~~~~ 188 (312)
...+++-.+-.+|.+..|...+. .+||+
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~ 173 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKP 173 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhh
Confidence 33444555556677788877663 35554
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=87.01 E-value=7.5 Score=37.48 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=55.0
Q ss_pred HHHHhhhhcCCC----ChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhccC
Q 021469 174 SLAAGRLTTGLP----SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 249 (312)
Q Consensus 174 ~~~~G~l~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~ 249 (312)
-.+.|.++|.++ ||++-++++.++......... ..+...+.. ..+.+..++-.+|-+.-....-++..+..++
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~-~~~~~~~s~--~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~ 117 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA-LLPASESSA--AIAVVLLFLASFGYAFADVAADALVVELARR 117 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH-hcccccchh--hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhc
Confidence 457789999653 455556667666543332221 233211111 1233333444455555556566666666543
Q ss_pred Ch---hhhHHHHHHHHHHHHHHHHHhhhhh
Q 021469 250 DT---EGAFAQLKVWQCASIAVVFFIGPYI 276 (312)
Q Consensus 250 ~~---~~afa~~~~~qs~g~ai~f~~~~~l 276 (312)
++ .+.-+....+.++|..++..+++.+
T Consensus 118 ~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 118 EPESRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33 2345677778888998888777654
No 267
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=82.36 E-value=54 Score=32.42 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccc--cccccccchhhHH-HHHHhHHHHHHHHHHhhhh
Q 021469 105 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI--VTPALGVSGVGGA-MAVYGAFDAICSLAAGRLT 181 (312)
Q Consensus 105 ~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~--~s~~lg~~~~g~v-~~~~g~~~~ig~~~~G~l~ 181 (312)
..+.++.-+.+++.+|-|.++.++-+.+..- .+|..++=.+.+ +...+..+..... .+.+. .|++.++..||..
T Consensus 261 ~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~K--igF~a~da~T~LKLlEkG~~KE~LAl~~li~~P-~qii~~~~~~Kws 337 (544)
T PF13000_consen 261 ILSIKDVYKSLWKILKLPNVQTLIIILLTAK--IGFQANDAVTSLKLLEKGLSKEDLALLVLIDFP-FQIILPYYIGKWS 337 (544)
T ss_pred hhhHHHHHHHHHHHHcCchHHHHHHHHHHHH--hccccchhhhHHHHHHcCCCHHHhHHHHHHhhh-HHHHHHHHhhhhh
Confidence 3578888899999999999988876655543 344444322221 1222222333222 22222 4677777777765
Q ss_pred c
Q 021469 182 T 182 (312)
Q Consensus 182 d 182 (312)
.
T Consensus 338 ~ 338 (544)
T PF13000_consen 338 A 338 (544)
T ss_pred c
Confidence 3
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=79.00 E-value=2 Score=42.41 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=42.2
Q ss_pred hcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHH
Q 021469 143 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 203 (312)
Q Consensus 143 ~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~ 203 (312)
++|.+++. +.-.++|.++..-.+.++++..+.|++.||+.+|+++.+...+..+.+.+
T Consensus 35 ~vy~kQLG---l~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 35 AVYFKQLG---LNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred HHHHHHcC---CCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 44555542 11257899999999999999999999999997777776666655554433
No 269
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=76.86 E-value=8.6 Score=29.10 Aligned_cols=56 Identities=16% Similarity=0.052 Sum_probs=40.0
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 86 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL 86 (312)
++++++..++.....+.+..+|..+...+....+ .+..|.+..++.+++.+...++
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG------WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc------hHHHHHHHHHHHHHHHHHHhhc
Confidence 4678999999999999999999988877653211 2345666666666666655544
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.15 E-value=14 Score=36.03 Aligned_cols=99 Identities=20% Similarity=0.160 Sum_probs=58.7
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 244 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g 244 (312)
+....-++++++.+.+.|+++.|. .++++...+.. +...++ + ++ .++.++.++++|+|++...+---..+.
T Consensus 58 iiY~~ftv~~l~~psiv~~i~~K~-~lv~ga~~y~~-f~~gfl-~-~N-----~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFLGPKW-ALVIGATCYAA-FPLGFL-F-PN-----SYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHhhHHH-HHHHHhHHHHH-HHHHHH-h-cc-----hHHHHHHHHHhhhhHHheecccceehh
Confidence 334455778888888889888664 56677766653 333332 3 23 267899999999999983333333444
Q ss_pred Hhcc-CChhhhH----HHHHHHHHHHHHHHHHh
Q 021469 245 ILFK-HDTEGAF----AQLKVWQCASIAVVFFI 272 (312)
Q Consensus 245 ~~~~-~~~~~af----a~~~~~qs~g~ai~f~~ 272 (312)
+..+ +..|+.- +++++-.-.|+.+.+.+
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 4443 3335443 44454444555555544
No 271
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=75.33 E-value=90 Score=30.96 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHHHHhccCCc-cccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhc-
Q 021469 67 LLFIVFLGVITLGTILMCFLRKEE-DKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE- 144 (312)
Q Consensus 67 ~~~~if~~i~~~g~~l~lfL~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~- 144 (312)
.+.+++....+++.++.--+++.- +.++.|.++ +..+..+||..=. ..++.|+-..+.=.+.-+|+...+..-.
T Consensus 206 S~iivl~L~~~v~~Il~R~l~~D~~~y~~~~~~~-~~~ee~GWKlvhg---DVFR~P~~~~lls~lvG~G~Qll~~~~~~ 281 (521)
T PF02990_consen 206 SFIIVLFLSGLVAIILLRTLRRDISRYNDEDSEE-DDQEESGWKLVHG---DVFRPPKHPMLLSALVGTGIQLLFMALVT 281 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccc-ccccccchhhhhH---HHhcCcCCchHHHhHhcchhhhhHHHHHH
Confidence 344444444555555554444321 112222111 2223344543322 3566677666666677777665554321
Q ss_pred -cccccc--ccccccchhhHHHHHHhHHHHHHHHHHhhhhcCCCC
Q 021469 145 -FTKEIV--TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS 186 (312)
Q Consensus 145 -~~~~~~--s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~ 186 (312)
....+. +..-.-+-....+++|.+++.++|+.++++.+.++.
T Consensus 282 ~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 282 LFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 100100 100000123345668899999999999999887654
No 272
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=71.53 E-value=1.5 Score=40.21 Aligned_cols=108 Identities=14% Similarity=0.128 Sum_probs=2.8
Q ss_pred HHHHhHHHHHHHHHHhhhhcCCC--ChhhHHHHHHHHHHHHHH-HHHhcccCCC----C-CCCchHHHHHHHHHHhhhhH
Q 021469 163 MAVYGAFDAICSLAAGRLTTGLP--SITFIVSGGAIAQVVVFL-WILINYSVTS----G-VLGTLYPLIMAALLGIGDGV 234 (312)
Q Consensus 163 ~~~~g~~~~ig~~~~G~l~d~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~-~~~~~~~~~~~~l~G~~d~~ 234 (312)
..+|.++..+|-.+.++. +++ +++.+. +..+.-..-.- ++.++..|+. . ..+.++++++.+++|+..+-
T Consensus 188 fl~Fn~gD~iGR~l~~~~--~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 188 FLLFNLGDFIGRFLASWP--RWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcchhccee--EecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 346888888888777653 232 223332 22222221111 1123444331 1 12235678889999999988
Q ss_pred HhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhh
Q 021469 235 LNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIG 273 (312)
Q Consensus 235 ~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~ 273 (312)
.-+.......+.-+ +++|.+-.+..+...+|.+++-.++
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776655555443 4446677777777777777776554
No 273
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=67.94 E-value=21 Score=34.07 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA 197 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~ 197 (312)
.-.+.|..|.++.+.+.||+|||+ .+.+..++
T Consensus 389 itslaefPGlLIt~~iverlGRKk-TMal~l~~ 420 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKK-TMALSLIL 420 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchh-HHHHHHHH
Confidence 456789999999999999999875 43344333
No 274
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=58.13 E-value=2.3e+02 Score=29.12 Aligned_cols=61 Identities=16% Similarity=0.081 Sum_probs=35.0
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcC-CCCchhhHHHHHHHHHHHHHHHHhc
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS-TSGTTLLFIVFLGVITLGTILMCFL 86 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~-~~~~~~~~~if~~i~~~g~~l~lfL 86 (312)
+.+.+++.+|+..-+++.+++..+.-.+-......+ .......|.+-+++++++.+++..-
T Consensus 120 ~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 120 SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 457777788877777777777666544421110000 0112345777777777777766543
No 275
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.01 E-value=34 Score=26.26 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=11.3
Q ss_pred HHHHHHHHHhhhhcCC
Q 021469 169 FDAICSLAAGRLTTGL 184 (312)
Q Consensus 169 ~~~ig~~~~G~l~d~~ 184 (312)
+.++-+...|+++||+
T Consensus 54 sGilVGa~iG~llD~~ 69 (116)
T COG5336 54 SGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4455666778889986
No 276
>PRK03612 spermidine synthase; Provisional
Probab=51.38 E-value=2.6e+02 Score=27.76 Aligned_cols=25 Identities=12% Similarity=-0.049 Sum_probs=19.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 251 TEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 251 ~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
..+..+-......+|+.++-+..++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 3456788888889999988887775
No 277
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=50.73 E-value=27 Score=31.50 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=25.2
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469 265 SIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 305 (312)
Q Consensus 265 g~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 305 (312)
|.+.+.+.+.+.|--.-.++++++.++-++.|.|+-+|.|+
T Consensus 248 gtAAtaA~aaF~Pcgiaalvllil~vvliiLYiWlyrrRK~ 288 (295)
T TIGR01478 248 ERAASAATSTFLPYGIAALVLIILTVVLIILYIWLYRRRKK 288 (295)
T ss_pred chHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34555555555444444556666666667888888776665
No 278
>PTZ00370 STEVOR; Provisional
Probab=48.55 E-value=30 Score=31.28 Aligned_cols=42 Identities=12% Similarity=0.148 Sum_probs=26.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021469 264 ASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 305 (312)
Q Consensus 264 ~g~ai~f~~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 305 (312)
+|.+.+.+.+.+.|--.-..+++++.++-++.|.|+-+|.|+
T Consensus 243 agtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyrrRK~ 284 (296)
T PTZ00370 243 AGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYRRRKN 284 (296)
T ss_pred cchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344555655555554444556666666677888888776655
No 279
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=46.43 E-value=56 Score=27.24 Aligned_cols=70 Identities=19% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCC----CchH-HHHHHHHHHhhhh
Q 021469 164 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL----GTLY-PLIMAALLGIGDG 233 (312)
Q Consensus 164 ~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~l~G~~d~ 233 (312)
+++++.+++++++.-.+++|++.--+=++.|.+..++.|...-..+|.-++.. ++.. -+.++.+||+.-+
T Consensus 75 ~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~lnP~fp~~~~~~~l~~nTiiT~~CiyiLyGlFIG 149 (173)
T PF11085_consen 75 VFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVLNPIFPMIKPVTELDWNTIITTLCIYILYGLFIG 149 (173)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcccccCChhhhhCchhHHHHHHHHHHHHHHHhc
Confidence 46788899999998888887653222244555555544443222233222221 1111 4556777887554
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=44.30 E-value=3e+02 Score=26.47 Aligned_cols=74 Identities=22% Similarity=0.237 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhh-------hh--hHHHHHHHHHHHHH
Q 021469 220 YPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP-------YI--SLQAMLIVMVVGIC 290 (312)
Q Consensus 220 ~~~~~~~l~G~~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~-------~l--~~~~~~~il~~~~~ 290 (312)
.-.++.++.+.+|+..|+.++...|. +|.+-.+| .-.-|+++.++.....- -. +....+.+-.++++
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqa---vm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~l 194 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQA---VMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILL 194 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHH---HHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHH
Confidence 46778999999999999999988876 44322212 22223333333332211 11 12223444446777
Q ss_pred HHHHHHH
Q 021469 291 VALVGIL 297 (312)
Q Consensus 291 ~~~~~~~ 297 (312)
++.++|.
T Consensus 195 lC~i~y~ 201 (406)
T KOG1479|consen 195 LCFVLYL 201 (406)
T ss_pred HHHHHHH
Confidence 7778887
No 281
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=41.81 E-value=2.4e+02 Score=27.33 Aligned_cols=172 Identities=13% Similarity=0.065 Sum_probs=0.0
Q ss_pred ccccchhhcchhhhhHHHHHHHHHHHhhcChhhHHHHHHHHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHH
Q 021469 92 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDA 171 (312)
Q Consensus 92 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~lll~p~~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ 171 (312)
.++.|.+....++..+++..--++.|-.+ +++++|+.+.+..|+-.+... ..|--+-..-+..+..+..-+.|. --
T Consensus 2 ~~~~~~e~~~~~~~~~~~~~~~~~~~~d~-~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~ 77 (510)
T KOG3574|consen 2 GQEIDLESLNVDPNANWFKKTHQTLKGDR-SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PF 77 (510)
T ss_pred CcccchhhhcCCCCCchhhhcchhhhhhh-hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HH
Q ss_pred HHHHHHhhhhc-----CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCC----------chHHHHHHHHHHhhhhHHh
Q 021469 172 ICSLAAGRLTT-----GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG----------TLYPLIMAALLGIGDGVLN 236 (312)
Q Consensus 172 ig~~~~G~l~d-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~G~~d~~~~ 236 (312)
.--++...+.| |+|||+ -++.-.-......+.++.+.+|.-..+ +++.+.+-++-...|-...
T Consensus 78 sLKllWaPiVDs~y~k~~Grrk--sWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVD 155 (510)
T KOG3574|consen 78 SLKLLWAPIVDSVYSKRFGRRK--SWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVD 155 (510)
T ss_pred HHHHHHHhhhHHHHHHhhcccc--ceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhh
Q ss_pred hhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHh
Q 021469 237 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 237 t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~ 272 (312)
-..-.++ -+++-..|......-|.+|.+.++.+
T Consensus 156 gwALtmL---s~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 156 GWALTML---SRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHhc---CHhhcCchhHHHHHHHhhhHHhhcce
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=40.32 E-value=3.5e+02 Score=26.08 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=56.1
Q ss_pred HHhhhhcCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCCchHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhhh
Q 021469 176 AAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEGA 254 (312)
Q Consensus 176 ~~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~a 254 (312)
....+.|..+ .+|+++++.+..+.++.++. |.++ ....-+.-+++|+.-++ +.--|+.+-..-| ++-+++
T Consensus 60 ~vflltd~l~-Ykpviil~~~~~i~t~~lll--~~~s-----v~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 60 PVFLLTDYLR-YKPVIILQALSYIITWLLLL--FGTS-----VLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHhh-hhHHHHHHHHHHHHHHHHHH--HHCc-----HHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHH
Confidence 3445567654 45787888888777776543 4322 12244677888887766 3333333333333 333678
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 021469 255 FAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 255 fa~~~~~qs~g~ai~f~~~~~ 275 (312)
-+..|...-+|-+++..++..
T Consensus 131 ts~~raa~l~g~~~s~~lgQl 151 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQL 151 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888887777664
No 283
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=37.87 E-value=2e+02 Score=28.95 Aligned_cols=137 Identities=15% Similarity=0.046 Sum_probs=81.1
Q ss_pred HhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHHHHHH-HHHH----hcccCCC----C---CCC-c-----hHHHHHHHH
Q 021469 166 YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF-LWIL----INYSVTS----G---VLG-T-----LYPLIMAAL 227 (312)
Q Consensus 166 ~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~----~---~~~-~-----~~~~~~~~l 227 (312)
++..+-....+++.+.|.+-.|.+.+.++.++..... .+.. ....|.+ + ..+ + ...+...-+
T Consensus 82 f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~l 161 (571)
T KOG1237|consen 82 FGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYL 161 (571)
T ss_pred HhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHH
Confidence 4445666778888999965334445555555554432 2211 1111211 1 111 1 134444555
Q ss_pred HHhhhhHHhhhhHhHHHHhccC--Ch-----hhhHHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHHHHHHHH
Q 021469 228 LGIGDGVLNTQLSALLGILFKH--DT-----EGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGI 296 (312)
Q Consensus 228 ~G~~d~~~~t~~~~i~g~~~~~--~~-----~~afa~~~~~qs~g~ai~f~~~~~l----~~~~~~~il~~~~~~~~~~~ 296 (312)
..+|.+.....+.+.-++-|++ +. ...|..+.+-++.|.-++...-.+. +......+..+...++++.|
T Consensus 162 ia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 162 IALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred heeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 5668888888888888888873 21 2569999999999998888765544 33445566666667776666
Q ss_pred HHhhhh
Q 021469 297 LFLTIQ 302 (312)
Q Consensus 297 ~~~~~~ 302 (312)
+.-...
T Consensus 242 ~~g~~~ 247 (571)
T KOG1237|consen 242 LPGFPF 247 (571)
T ss_pred HcCcee
Confidence 665443
No 284
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=37.38 E-value=3.4e+02 Score=25.08 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=61.3
Q ss_pred HHhHHHHHHHHHHhhhhcCC--CChhhHHHHHHHHHHHHHHHHHhcccCC----CCCCCc------hHHHHH----HHHH
Q 021469 165 VYGAFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVT----SGVLGT------LYPLIM----AALL 228 (312)
Q Consensus 165 ~~g~~~~ig~~~~G~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~----~~l~ 228 (312)
-.|+..++.++.+-.+.|.+ |...|....+..+ .++...++-+|..+ ++.+|. ....+. -.++
T Consensus 175 gNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL-aigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~LL 253 (454)
T KOG4332|consen 175 GNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL-AIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIALL 253 (454)
T ss_pred hccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH-HHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHHH
Confidence 45667788888888888865 4444443222222 23333333355422 112221 111222 3577
Q ss_pred HhhhhHHhhhhHhHHHHh----ccCChh----hhHHHHHHHHHHHHHHHHHhhhh
Q 021469 229 GIGDGVLNTQLSALLGIL----FKHDTE----GAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 229 G~~d~~~~t~~~~i~g~~----~~~~~~----~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
|--++.++..+|..+=.. -|++++ ..|+.|-...-+|+.+.--+.+.
T Consensus 254 G~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~ 308 (454)
T KOG4332|consen 254 GAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSR 308 (454)
T ss_pred HHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhc
Confidence 888888888888654322 233332 56888888888888887655443
No 285
>PF10292 7TM_GPCR_Srab: Serpentine type 7TM GPCR receptor class ab chemoreceptor; InterPro: IPR019408 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. Srab is part of the Sra superfamily of chemoreceptors. The expression pattern of the srab genes is biologically intriguing. Of the six promoters successfully expressed in transgenic organisms, one was exclusively expressed in the tail phasmid neurons, two were exclusively expressed in a head amphid neuron, and two were expressed both in the head and tail neurons as well as a limited number of other cells [].
Probab=35.92 E-value=2.1e+02 Score=26.28 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=13.0
Q ss_pred ceeechhhHHHHHHHHhH
Q 021469 26 TVIGSFNGEFWGMFASHQ 43 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~ 43 (312)
|+.++..|+...+.|...
T Consensus 132 E~~~~~~Gi~l~~~qi~i 149 (324)
T PF10292_consen 132 EKSGKWLGILLAFFQILI 149 (324)
T ss_pred cCCCccHHHHHHHHHHHH
Confidence 556778888888777553
No 286
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=32.94 E-value=4.2e+02 Score=24.93 Aligned_cols=74 Identities=19% Similarity=0.160 Sum_probs=40.4
Q ss_pred HHHHHHHHHHh-hcChhhHHHHHH-HHhhhhHhhhhhhcccccccccccccchhhHHHHHHhHHHHHHHHHHhhhhcC
Q 021469 108 LVSLSKSITTL-LADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 183 (312)
Q Consensus 108 ~~~~~~~~~~~-~~~~~~lll~p~-~~~~G~~~~f~~~~~~~~~~s~~lg~~~~g~v~~~~g~~~~ig~~~~G~l~d~ 183 (312)
.++.+++.++. ..|||++++--. .++-|-..-|+. .-+.++..+. ..--.|++..++=++.++|+.+..++..+
T Consensus 229 ~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVf-lWtPaL~~~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 229 LSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVF-LWTPALDPDD-EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhee-eeeceecCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555556664 568998665422 222332222221 1233332111 00124788888889999999999877653
No 287
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=31.63 E-value=1.3e+02 Score=26.65 Aligned_cols=58 Identities=24% Similarity=0.311 Sum_probs=32.5
Q ss_pred CceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHH--HHHHHHHHHhccCCc
Q 021469 25 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGV--ITLGTILMCFLRKEE 90 (312)
Q Consensus 25 ~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i--~~~g~~l~lfL~~~~ 90 (312)
+++||+-.|+--+.+.+|..+=..+...++.. +. .-|..|.++ ..++.+.+.++++.+
T Consensus 126 P~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~-------~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 126 PRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DP-------SSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ccccCceehhhhHHHHhHHHHHHHHHHHHcCC-Ch-------HHHHHHHHHHHHHHHHHHhhheeccC
Confidence 46899999999999988874433333333332 11 124444443 334444456666543
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=29.12 E-value=4.9e+02 Score=24.48 Aligned_cols=56 Identities=9% Similarity=0.056 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHh-hhhHHhhhhHhHHHHhccCChhhhHHHHHHHHHHHHHHHHHhhh
Q 021469 219 LYPLIMAALLGI-GDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP 274 (312)
Q Consensus 219 ~~~~~~~~l~G~-~d~~~~t~~~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~~~ 274 (312)
++.|++-+.=|+ |.+.+-+.-+.+--+.-||++|-+++....--+.|..++=+++-
T Consensus 343 ~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 343 WIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 556777777777 44444444444555556777788888877777777776655543
No 289
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.44 E-value=1.7e+02 Score=30.44 Aligned_cols=56 Identities=20% Similarity=0.193 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHHhhhh
Q 021469 220 YPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFFIGPY 275 (312)
Q Consensus 220 ~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~~~~~ 275 (312)
+.++.-++.|+|..-.++.-.+.+-+.-+ +++..++++....-.+|=+++|.++++
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~ 295 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSF 295 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHH
Confidence 35566788899987777776666655433 344578999999999999999998874
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=27.24 E-value=2e+02 Score=26.58 Aligned_cols=57 Identities=12% Similarity=-0.037 Sum_probs=38.3
Q ss_pred cCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHHHhc
Q 021469 24 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 86 (312)
Q Consensus 24 ~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~lfL 86 (312)
+++.+.+++.+|+..-+.|.++|......+-.... ...-|.+=.+.++++.+.++.-
T Consensus 66 ~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~------~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 66 DDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG------WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------HHHHHHHHHHHHHHHHHHHHCC
T ss_pred chhhhhhhHHHHHHHHhhhhHhhcccchhhccccc------hhhhhhHHHHHHHHHHHHHHhC
Confidence 36789999999999999999998877766643211 2234555555566666655543
No 291
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.59 E-value=72 Score=31.01 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=21.9
Q ss_pred HHHHHhHHHHHHHHHHhhhhcCCCChhhH
Q 021469 162 AMAVYGAFDAICSLAAGRLTTGLPSITFI 190 (312)
Q Consensus 162 v~~~~g~~~~ig~~~~G~l~d~~~~~~~~ 190 (312)
...+|++.+-+.+.++|-+-.|.+.|+++
T Consensus 332 aI~vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 332 AIVVYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred HHHHHHhcccccccccceeeehhccHHHH
Confidence 44678888888889988887788665443
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.48 E-value=2.8e+02 Score=21.42 Aligned_cols=22 Identities=55% Similarity=0.744 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhhhHHhhhhHh
Q 021469 220 YPLIMAALLGIGDGVLNTQLSA 241 (312)
Q Consensus 220 ~~~~~~~l~G~~d~~~~t~~~~ 241 (312)
|.+++..++|||-+.++....+
T Consensus 75 wglIv~lllGf~AG~lnv~Rsa 96 (116)
T COG5336 75 WGLIVFLLLGFGAGVLNVLRSA 96 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5888999999999998877664
No 293
>PF15102 TMEM154: TMEM154 protein family
Probab=23.82 E-value=52 Score=26.68 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcc
Q 021469 284 VMVVGICVALVGILFLTIQVEKAF 307 (312)
Q Consensus 284 il~~~~~~~~~~~~~~~~~~~~~~ 307 (312)
++++++++.+++.....+|+|.|+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 445555555555555555555544
No 294
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=23.66 E-value=4.6e+02 Score=22.33 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh
Q 021469 255 FAQLKVWQCASIAVVFFIGPYIS 277 (312)
Q Consensus 255 fa~~~~~qs~g~ai~f~~~~~l~ 277 (312)
.+......+....+.|.....++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~ 192 (240)
T PF01925_consen 170 SAFFFFFSSVAALISFLILGDVD 192 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc
Confidence 44556666677777776655544
No 295
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=21.60 E-value=6.4e+02 Score=23.18 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=19.2
Q ss_pred ceeechhhHHHHHHHHhHhhhhHHh
Q 021469 26 TVIGSFNGEFWGMFASHQFVGNLIT 50 (312)
Q Consensus 26 ~~~g~~~gifw~i~~~s~iiG~li~ 50 (312)
+.+-.-++.||.++....+.|.-+.
T Consensus 25 np~R~gt~lFW~llg~~F~~G~~lp 49 (308)
T PF06166_consen 25 NPKRIGTALFWGLLGLIFIFGDYLP 49 (308)
T ss_pred CCcccchHHHHHHHHHHHHcCccch
Confidence 3445567999999999998887544
No 296
>PF04276 DUF443: Protein of unknown function (DUF443) ; InterPro: IPR005915 The members of this family share 50 % or greater sequence identity. They are found as eleven tandem genes, arranged head-to-tail, in Staphylococcus aureus (strain COL). Distant full-length homologs are found in a Staphylococcus haemolyticus plasmid and in Bacillus halodurans. The function of these proteins is unknown.
Probab=21.59 E-value=2.7e+02 Score=23.72 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=37.5
Q ss_pred cccchhhhhhcCCCcCceeechhhHHHHHHHHhHhhhhHHhhHhhcCCCCcCCCCchhhHHHHHHHHHHHHHHH-HhccC
Q 021469 10 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRK 88 (312)
Q Consensus 10 t~~s~~~~~~~~~~~~~~~g~~~gifw~i~~~s~iiG~li~~~~~~~~~~~~~~~~~~~~~if~~i~~~g~~l~-lfL~~ 88 (312)
.+.+++..++.+..++++ +..+.-|..-..|-++|++.--......-+ ....+-.+...++.++++.+ ..+.+
T Consensus 39 ~kIs~~e~~~L~~~k~~~--k~~~~~~~~~G~~vli~~llr~~~~~~~i~----~~~~i~~~i~~i~~l~v~~l~~~l~k 112 (199)
T PF04276_consen 39 YKISEEEFEKLNIVKPKN--KNNSIGWLGAGISVLISVLLRPYIDYFNIQ----SSRIINIIICIIVILGVLILRIYLNK 112 (199)
T ss_pred EEeCHHHHhcccCCCCcc--cccchhhHHHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355666666665555554 444544555555667776665444332211 12334444455555565543 44544
Q ss_pred Cc
Q 021469 89 EE 90 (312)
Q Consensus 89 ~~ 90 (312)
..
T Consensus 113 k~ 114 (199)
T PF04276_consen 113 KL 114 (199)
T ss_pred hh
Confidence 43
No 297
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.88 E-value=1.2e+02 Score=23.80 Aligned_cols=10 Identities=20% Similarity=0.036 Sum_probs=2.6
Q ss_pred hhhhhhccCC
Q 021469 300 TIQVEKAFYS 309 (312)
Q Consensus 300 ~~~~~~~~~~ 309 (312)
.+|.+||.++
T Consensus 88 irR~~Kk~~~ 97 (122)
T PF01102_consen 88 IRRLRKKSSS 97 (122)
T ss_dssp HHHHS-----
T ss_pred HHHHhccCCC
Confidence 3555555433
No 298
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.78 E-value=1.7e+02 Score=20.38 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhc
Q 021469 284 VMVVGICVALVGILFLTIQVEKA 306 (312)
Q Consensus 284 il~~~~~~~~~~~~~~~~~~~~~ 306 (312)
+++++|++.+...++..++.+|.
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~ 28 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKT 28 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc
Confidence 44455555555555555555553
No 299
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=20.51 E-value=28 Score=34.74 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=2.7
Q ss_pred cchhhHHHHHHhHHHHHHHHHHhhhhcCCCChhhHHHHHHHHH-HHHHHHHHhc-----ccCC------------CCCC-
Q 021469 156 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ-VVVFLWILIN-----YSVT------------SGVL- 216 (312)
Q Consensus 156 ~~~~g~v~~~~g~~~~ig~~~~G~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~------------~~~~- 216 (312)
.++.|.+...|-++..+..++..++..|.+|-+++ ..|.++. +.+++..+.+ ++++ .+..
T Consensus 37 S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi-g~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~ 115 (539)
T PF03137_consen 37 SSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI-GIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCD 115 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee-eecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccccc
Confidence 35788999999999999999998888765543333 3444333 3333333221 1100 0001
Q ss_pred ------------------C-----c-hHHHHHHHHHHhhhhHHhhhhHhHHHHhcc-CChhhhHHHHHHHHHHHHHHHHH
Q 021469 217 ------------------G-----T-LYPLIMAALLGIGDGVLNTQLSALLGILFK-HDTEGAFAQLKVWQCASIAVVFF 271 (312)
Q Consensus 217 ------------------~-----~-~~~~~~~~l~G~~d~~~~t~~~~i~g~~~~-~~~~~afa~~~~~qs~g~ai~f~ 271 (312)
+ + .+.++.-++.|+|.+-.++.-.+.+-+--+ ++...+.+++.....+|-+++|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~ 195 (539)
T PF03137_consen 116 SSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFL 195 (539)
T ss_dssp ------------------------------------SSS-----------------------------------------
T ss_pred ccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHH
Confidence 0 0 134556788899887776666666655433 23346799999999999999999
Q ss_pred hhhh
Q 021469 272 IGPY 275 (312)
Q Consensus 272 ~~~~ 275 (312)
+++.
T Consensus 196 lg~~ 199 (539)
T PF03137_consen 196 LGSF 199 (539)
T ss_dssp ----
T ss_pred HHHH
Confidence 8774
No 300
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=20.17 E-value=5.4e+02 Score=23.18 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=21.7
Q ss_pred HhHHHHhccCChhhhHHHHHHHHHHHHHHHHHh
Q 021469 240 SALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 272 (312)
Q Consensus 240 ~~i~g~~~~~~~~~afa~~~~~qs~g~ai~f~~ 272 (312)
|+++..+||++++ .-.+-|+..|+|..++...
T Consensus 40 y~l~~~lfp~~~~-l~~~er~~ls~glSi~~~~ 71 (287)
T PF07760_consen 40 YALVAALFPRKHD-LDGIERLALSVGLSIAIVP 71 (287)
T ss_pred HHHHHHHccCcCC-CcHHHHHHHHHHHHHHHHH
Confidence 6888999986553 4456677777777665543
Done!