BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021473
MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTL
TLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIP
PVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRF
VDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSG
DLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMSQRSPVFTKALVYVSN
SWVSLFLSRTLA

High Scoring Gene Products

Symbol, full name Information P value
AT3G61320 protein from Arabidopsis thaliana 1.8e-64
AT2G45870 protein from Arabidopsis thaliana 6.0e-64

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021473
        (312 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098881 - symbol:AT3G61320 "AT3G61320" species...   657  1.8e-64   1
TAIR|locus:2050740 - symbol:AT2G45870 "AT2G45870" species...   652  6.0e-64   1


>TAIR|locus:2098881 [details] [associations]
            symbol:AT3G61320 "AT3G61320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0031969 EMBL:AL137898 InterPro:IPR021134 Pfam:PF01062
            eggNOG:COG3781 OMA:HILLIMG HOGENOM:HOG000239649
            ProtClustDB:CLSN2683446 InterPro:IPR024701 PIRSF:PIRSF016988
            EMBL:AY058894 EMBL:AY143083 IPI:IPI00526338 PIR:T47924
            RefSeq:NP_191691.2 UniGene:At.26644 UniGene:At.67614
            EnsemblPlants:AT3G61320.1 GeneID:825304 KEGG:ath:AT3G61320
            TAIR:At3g61320 InParanoid:Q9M2D2 PhylomeDB:Q9M2D2
            Genevestigator:Q9M2D2 Uniprot:Q9M2D2
        Length = 410

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 146/273 (53%), Positives = 176/273 (64%)

Query:    14 SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
             S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct:    11 SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 69

Query:    73 ADRVKERGVKQKRTLYSHEKWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVI 132
             AD +KERG++QKR+LY+HEKWVEH                       PPV  FT VAVVI
Sbjct:    70 ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129

Query:   133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
             ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct:   130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query:   193 GTNDFATMVISGTDNSTDECI-KDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXX 251
             GTND A  VI   D+S DE I KD LLRYI AFPVALK HVI  SD++            
Sbjct:   190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query:   252 XXXXXSKHRPRCIIEFISQSLQLLNLEATKQNM 284
                  +KHRPRC+IEFISQS+QLL L+  K+++
Sbjct:   250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDL 282


>TAIR|locus:2050740 [details] [associations]
            symbol:AT2G45870 "AT2G45870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009909 "regulation of flower development"
            evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
            [GO:0048449 "floral organ formation" evidence=RCA] GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 EMBL:AC004665
            InterPro:IPR021134 Pfam:PF01062 eggNOG:COG3781 EMBL:AY074634
            IPI:IPI00538400 PIR:T02460 RefSeq:NP_182111.1 UniGene:At.37028
            EnsemblPlants:AT2G45870.1 GeneID:819195 KEGG:ath:AT2G45870
            TAIR:At2g45870 HOGENOM:HOG000239649 InParanoid:O80832 OMA:TLPVILW
            PhylomeDB:O80832 ProtClustDB:CLSN2683446 Genevestigator:O80832
            GermOnline:AT2G45870 InterPro:IPR024701 PIRSF:PIRSF016988
            Uniprot:O80832
        Length = 410

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 136/254 (53%), Positives = 170/254 (66%)

Query:    35 SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHE 91
             +++P  L FK   SC+ S  +S+   L+  LIS+L+A+P+W+D +KER ++QKR+LY+HE
Sbjct:    29 ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHE 88

Query:    92 KWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVIASYNSALDSHLLPGFLPVL 151
              WV H                       PPV  FT VA++IA YNSA+D   LP F PVL
Sbjct:    89 NWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVL 148

Query:   152 RASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE 211
             RAS LPYQLTAPALALLLVFRTEASYSRF  G+KAW +II+GTND A +VIS    S DE
Sbjct:   149 RASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDE 208

Query:   212 CI-KDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXXXXXXXSKHRPRCIIEFISQ 270
              I +D+LLRYI+AFPVALK HVI  SD++                 SKHRPRC+I+FISQ
Sbjct:   209 LIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQ 268

Query:   271 SLQLLNLEATKQNM 284
             SLQLLNL++TK +M
Sbjct:   269 SLQLLNLDSTKIDM 282


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      312       273    0.0010  114 3  11 22  0.45    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  194 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.08u 0.11s 20.19t   Elapsed:  00:00:01
  Total cpu time:  20.08u 0.11s 20.19t   Elapsed:  00:00:01
  Start:  Mon May 20 20:23:59 2013   End:  Mon May 20 20:24:00 2013

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