Query 021479
Match_columns 312
No_of_seqs 278 out of 1393
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 03:17:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021479.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021479hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 9.4E-37 2E-41 247.0 26.9 273 10-305 4-293 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 1.1E-35 2.3E-40 238.5 22.3 264 15-307 3-267 (276)
3 PRK00870 haloalkane dehalogena 100.0 5.2E-35 1.1E-39 237.5 22.3 268 10-305 15-300 (302)
4 PRK03592 haloalkane dehalogena 100.0 9.8E-35 2.1E-39 235.3 22.9 274 14-309 7-292 (295)
5 PLN02679 hydrolase, alpha/beta 100.0 8.5E-34 1.8E-38 234.6 26.7 275 16-306 63-357 (360)
6 PLN02385 hydrolase; alpha/beta 100.0 1.3E-34 2.7E-39 239.4 20.7 269 18-308 66-347 (349)
7 PRK03204 haloalkane dehalogena 100.0 6.4E-34 1.4E-38 228.6 24.0 267 12-303 12-285 (286)
8 PLN02578 hydrolase 100.0 3.2E-33 6.9E-38 231.0 28.7 271 16-304 68-353 (354)
9 PLN02965 Probable pheophorbida 100.0 1E-34 2.2E-39 230.1 17.3 244 38-305 4-252 (255)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 4.8E-33 1E-37 224.4 25.8 259 24-304 20-281 (282)
11 TIGR03056 bchO_mg_che_rel puta 100.0 1.9E-32 4.2E-37 220.5 24.3 272 14-304 6-278 (278)
12 PLN03087 BODYGUARD 1 domain co 100.0 3.1E-32 6.8E-37 228.1 26.2 278 17-304 179-477 (481)
13 PHA02857 monoglyceride lipase; 100.0 5E-33 1.1E-37 223.3 20.6 264 18-306 5-273 (276)
14 PLN02298 hydrolase, alpha/beta 100.0 1.4E-32 2.9E-37 226.0 21.3 271 16-308 35-319 (330)
15 PRK10349 carboxylesterase BioH 100.0 3.9E-32 8.5E-37 215.7 23.2 236 38-303 14-253 (256)
16 TIGR03611 RutD pyrimidine util 100.0 2.2E-32 4.8E-37 217.6 21.4 241 35-304 11-256 (257)
17 KOG4178 Soluble epoxide hydrol 100.0 1.7E-32 3.6E-37 211.5 18.0 275 11-306 19-320 (322)
18 PRK10673 acyl-CoA esterase; Pr 100.0 4.8E-32 1E-36 215.4 20.9 239 35-305 14-254 (255)
19 PLN03084 alpha/beta hydrolase 100.0 2.7E-31 6E-36 218.5 25.8 263 20-304 111-382 (383)
20 PRK10749 lysophospholipase L2; 100.0 2.4E-32 5.3E-37 223.8 18.5 278 13-306 30-329 (330)
21 PLN02211 methyl indole-3-aceta 100.0 4E-32 8.7E-37 216.1 17.3 251 22-296 5-264 (273)
22 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.8E-31 6E-36 210.3 22.1 245 27-304 3-251 (251)
23 PRK06489 hypothetical protein; 100.0 6.6E-31 1.4E-35 217.9 24.5 267 21-307 47-358 (360)
24 KOG1455 Lysophospholipase [Lip 100.0 1.6E-31 3.5E-36 202.8 17.3 266 18-306 32-312 (313)
25 TIGR01738 bioH putative pimelo 100.0 2E-30 4.4E-35 204.6 22.5 237 37-303 4-245 (245)
26 PRK11126 2-succinyl-6-hydroxy- 100.0 3.9E-30 8.4E-35 202.8 22.6 236 37-305 2-241 (242)
27 COG2267 PldB Lysophospholipase 100.0 3E-30 6.4E-35 205.9 21.3 282 10-309 6-297 (298)
28 PLN02894 hydrolase, alpha/beta 100.0 6.3E-30 1.4E-34 213.6 24.1 271 25-306 93-389 (402)
29 KOG4409 Predicted hydrolase/ac 100.0 5.4E-30 1.2E-34 198.2 20.9 259 35-305 88-363 (365)
30 TIGR01250 pro_imino_pep_2 prol 100.0 2.4E-29 5.2E-34 203.4 24.9 266 18-304 6-288 (288)
31 PF12697 Abhydrolase_6: Alpha/ 100.0 1.7E-30 3.7E-35 202.7 17.3 222 40-291 1-225 (228)
32 KOG1454 Predicted hydrolase/ac 100.0 1.4E-30 3.1E-35 209.6 17.0 251 36-307 57-325 (326)
33 PRK08775 homoserine O-acetyltr 100.0 1E-30 2.2E-35 215.5 15.6 270 14-307 36-340 (343)
34 PRK07581 hypothetical protein; 100.0 1.4E-29 3.1E-34 208.8 22.4 276 21-307 23-337 (339)
35 PF10230 DUF2305: Uncharacteri 100.0 2E-28 4.3E-33 192.4 26.7 248 37-286 2-266 (266)
36 PRK00175 metX homoserine O-ace 100.0 4E-29 8.6E-34 208.1 20.5 277 21-307 30-375 (379)
37 PRK14875 acetoin dehydrogenase 100.0 1.8E-28 4E-33 205.3 23.1 254 18-305 113-370 (371)
38 TIGR03695 menH_SHCHC 2-succiny 100.0 2.3E-28 5E-33 193.4 22.2 242 37-304 1-251 (251)
39 PLN02652 hydrolase; alpha/beta 100.0 3.5E-28 7.5E-33 201.4 23.2 263 20-308 117-389 (395)
40 TIGR01392 homoserO_Ac_trn homo 100.0 1.2E-28 2.6E-33 203.8 20.4 270 20-304 12-351 (351)
41 PLN02980 2-oxoglutarate decarb 100.0 4.6E-27 1E-31 224.2 24.3 258 28-308 1362-1641(1655)
42 TIGR01249 pro_imino_pep_1 prol 100.0 3.7E-26 8.1E-31 185.6 23.9 122 17-146 7-130 (306)
43 TIGR01607 PST-A Plasmodium sub 100.0 9.5E-27 2.1E-31 190.1 20.1 266 19-305 3-332 (332)
44 PLN02511 hydrolase 100.0 1.1E-26 2.4E-31 193.4 19.1 254 35-307 98-366 (388)
45 PRK05855 short chain dehydroge 99.9 1.6E-26 3.4E-31 204.9 18.9 270 16-305 5-291 (582)
46 COG1647 Esterase/lipase [Gener 99.9 9.5E-26 2.1E-30 163.2 18.6 225 38-305 16-243 (243)
47 PRK05077 frsA fermentation/res 99.9 5.7E-25 1.2E-29 183.9 23.6 219 35-307 192-413 (414)
48 PRK10985 putative hydrolase; P 99.9 8E-25 1.7E-29 178.9 20.0 253 36-308 57-322 (324)
49 KOG3975 Uncharacterized conser 99.9 6.4E-24 1.4E-28 156.0 22.1 281 15-303 2-300 (301)
50 KOG2984 Predicted hydrolase [G 99.9 8E-26 1.7E-30 160.7 10.6 248 13-306 20-276 (277)
51 KOG2382 Predicted alpha/beta h 99.9 2.5E-24 5.5E-29 166.6 16.7 249 35-305 50-312 (315)
52 PRK06765 homoserine O-acetyltr 99.9 9E-24 2E-28 174.5 20.5 274 22-306 39-388 (389)
53 PRK13604 luxD acyl transferase 99.9 3.8E-23 8.2E-28 162.0 20.5 220 20-284 16-246 (307)
54 PLN02872 triacylglycerol lipas 99.9 6.2E-23 1.3E-27 169.5 19.9 290 13-311 43-394 (395)
55 PF00561 Abhydrolase_1: alpha/ 99.9 5.8E-24 1.3E-28 166.3 13.1 213 68-292 1-225 (230)
56 TIGR01836 PHA_synth_III_C poly 99.9 4.5E-22 9.8E-27 164.6 23.9 254 37-305 62-349 (350)
57 TIGR03100 hydr1_PEP hydrolase, 99.9 2.6E-22 5.6E-27 160.1 20.6 233 36-304 25-273 (274)
58 PRK10566 esterase; Provisional 99.9 6.8E-21 1.5E-25 150.7 20.0 206 35-306 25-248 (249)
59 PRK11071 esterase YqiA; Provis 99.9 5.6E-21 1.2E-25 143.2 17.4 186 38-304 2-189 (190)
60 PRK07868 acyl-CoA synthetase; 99.9 1.2E-20 2.5E-25 175.0 22.8 262 36-307 66-362 (994)
61 TIGR01838 PHA_synth_I poly(R)- 99.9 3E-20 6.5E-25 157.8 22.5 251 26-290 174-463 (532)
62 COG0429 Predicted hydrolase of 99.9 1.3E-20 2.8E-25 145.7 15.7 272 18-308 53-342 (345)
63 PF06342 DUF1057: Alpha/beta h 99.9 1.2E-19 2.6E-24 137.5 20.5 107 34-147 32-138 (297)
64 KOG1552 Predicted alpha/beta h 99.9 2.5E-20 5.4E-25 139.4 16.6 195 35-308 58-254 (258)
65 TIGR03101 hydr2_PEP hydrolase, 99.9 1.4E-20 3.1E-25 147.0 14.8 112 35-147 23-135 (266)
66 KOG2564 Predicted acetyltransf 99.9 5.5E-20 1.2E-24 137.9 16.2 107 34-143 71-179 (343)
67 PF12695 Abhydrolase_5: Alpha/ 99.9 5.9E-20 1.3E-24 133.0 15.7 143 39-282 1-145 (145)
68 COG0596 MhpC Predicted hydrola 99.8 1.5E-19 3.2E-24 144.3 18.8 249 37-303 21-279 (282)
69 KOG4391 Predicted alpha/beta h 99.8 1E-19 2.2E-24 131.4 13.0 217 22-307 63-283 (300)
70 COG3208 GrsT Predicted thioest 99.8 1.9E-17 4E-22 123.3 19.3 226 35-304 5-234 (244)
71 PRK11460 putative hydrolase; P 99.8 1.2E-17 2.6E-22 129.6 18.9 177 34-308 13-210 (232)
72 PF06500 DUF1100: Alpha/beta h 99.8 2.1E-17 4.7E-22 133.8 18.3 226 28-307 180-410 (411)
73 KOG1838 Alpha/beta hydrolase [ 99.8 2E-16 4.4E-21 127.2 20.2 250 36-306 124-388 (409)
74 COG2021 MET2 Homoserine acetyl 99.8 4.8E-17 1E-21 128.3 15.7 274 22-305 34-367 (368)
75 TIGR02821 fghA_ester_D S-formy 99.8 2.9E-16 6.4E-21 125.4 20.6 124 22-147 23-174 (275)
76 PLN00021 chlorophyllase 99.8 1.3E-16 2.8E-21 128.3 18.1 106 33-146 48-166 (313)
77 KOG4667 Predicted esterase [Li 99.7 6.8E-17 1.5E-21 116.8 13.3 223 36-307 32-259 (269)
78 PLN02442 S-formylglutathione h 99.7 6.4E-16 1.4E-20 123.7 20.3 123 23-146 29-178 (283)
79 PF03096 Ndr: Ndr family; Int 99.7 7.2E-16 1.6E-20 118.8 18.4 261 20-305 5-278 (283)
80 COG1506 DAP2 Dipeptidyl aminop 99.7 4.7E-16 1E-20 137.2 17.7 234 14-308 366-618 (620)
81 TIGR03230 lipo_lipase lipoprot 99.7 2.8E-16 6E-21 130.1 13.5 111 34-146 38-154 (442)
82 KOG2931 Differentiation-relate 99.7 1.9E-14 4.2E-19 109.3 21.3 263 18-305 26-305 (326)
83 PF00326 Peptidase_S9: Prolyl 99.7 1.2E-15 2.5E-20 117.7 14.8 190 58-308 8-211 (213)
84 TIGR01840 esterase_phb esteras 99.7 1.4E-15 2.9E-20 117.0 14.9 108 35-144 11-128 (212)
85 TIGR01839 PHA_synth_II poly(R) 99.7 1.4E-14 3E-19 122.3 21.3 251 26-288 201-487 (560)
86 PF02230 Abhydrolase_2: Phosph 99.7 6.9E-15 1.5E-19 113.3 16.8 186 29-306 6-215 (216)
87 PF01738 DLH: Dienelactone hyd 99.7 4.4E-15 9.4E-20 114.8 15.7 185 35-307 12-218 (218)
88 TIGR01849 PHB_depoly_PhaZ poly 99.7 9.6E-14 2.1E-18 113.9 23.8 255 38-305 103-405 (406)
89 PF08538 DUF1749: Protein of u 99.7 1.3E-14 2.9E-19 112.9 17.2 239 36-304 32-303 (303)
90 PRK10162 acetyl esterase; Prov 99.7 5.5E-14 1.2E-18 114.5 21.8 115 26-147 69-196 (318)
91 PF00975 Thioesterase: Thioest 99.7 3.7E-14 8E-19 110.7 19.7 96 39-143 2-101 (229)
92 PF06821 Ser_hydrolase: Serine 99.6 5E-15 1.1E-19 108.3 12.9 155 40-287 1-158 (171)
93 PF12146 Hydrolase_4: Putative 99.6 1.3E-15 2.9E-20 95.8 7.8 78 23-103 1-79 (79)
94 COG4757 Predicted alpha/beta h 99.6 1E-14 2.2E-19 107.0 13.2 259 16-303 8-280 (281)
95 cd00707 Pancreat_lipase_like P 99.6 1.9E-15 4.2E-20 119.9 9.7 110 34-146 33-147 (275)
96 COG2945 Predicted hydrolase of 99.6 6.8E-14 1.5E-18 99.8 16.3 185 25-304 15-205 (210)
97 PF05448 AXE1: Acetyl xylan es 99.6 5.6E-13 1.2E-17 107.5 22.4 215 34-305 80-319 (320)
98 KOG2565 Predicted hydrolases o 99.6 7E-14 1.5E-18 109.6 14.2 120 19-141 129-259 (469)
99 TIGR00976 /NonD putative hydro 99.6 9.5E-14 2.1E-18 121.5 16.9 121 22-147 5-133 (550)
100 TIGR03502 lipase_Pla1_cef extr 99.6 5.4E-14 1.2E-18 123.7 13.2 117 13-132 417-576 (792)
101 COG0400 Predicted esterase [Ge 99.5 5.4E-13 1.2E-17 99.8 15.4 112 31-146 12-134 (207)
102 KOG2624 Triglyceride lipase-ch 99.5 3.4E-12 7.4E-17 104.6 17.8 288 14-307 48-399 (403)
103 COG0412 Dienelactone hydrolase 99.5 7.4E-12 1.6E-16 96.9 18.0 183 37-308 27-235 (236)
104 COG3458 Acetyl esterase (deace 99.5 1.4E-12 3E-17 98.2 12.5 211 35-306 81-317 (321)
105 PRK10115 protease 2; Provision 99.4 7E-12 1.5E-16 111.7 17.7 126 18-147 421-560 (686)
106 PF05728 UPF0227: Uncharacteri 99.4 1.9E-11 4.2E-16 90.4 16.9 90 40-147 2-92 (187)
107 PRK10252 entF enterobactin syn 99.4 1.3E-11 2.9E-16 119.5 19.3 99 37-144 1068-1169(1296)
108 PF02129 Peptidase_S15: X-Pro 99.4 4.5E-11 9.7E-16 95.6 18.4 111 33-149 16-139 (272)
109 KOG4627 Kynurenine formamidase 99.4 2.4E-12 5.2E-17 92.8 9.2 196 22-287 52-252 (270)
110 COG3319 Thioesterase domains o 99.4 9.3E-11 2E-15 90.7 17.3 98 38-144 1-101 (257)
111 COG3545 Predicted esterase of 99.4 1.1E-10 2.4E-15 82.6 15.9 155 38-284 3-158 (181)
112 COG3243 PhaC Poly(3-hydroxyalk 99.4 6E-11 1.3E-15 95.5 15.6 238 37-288 107-376 (445)
113 PF07819 PGAP1: PGAP1-like pro 99.3 1.8E-11 4E-16 94.0 11.5 103 37-143 4-120 (225)
114 PF07859 Abhydrolase_3: alpha/ 99.3 5.2E-11 1.1E-15 91.7 13.4 98 40-147 1-111 (211)
115 PTZ00472 serine carboxypeptida 99.3 5.6E-10 1.2E-14 95.0 20.4 116 34-149 74-219 (462)
116 COG3571 Predicted hydrolase of 99.3 8.5E-10 1.8E-14 76.6 16.7 189 32-305 9-210 (213)
117 PF03959 FSH1: Serine hydrolas 99.3 3.5E-11 7.7E-16 92.1 11.2 166 36-286 3-205 (212)
118 PRK05371 x-prolyl-dipeptidyl a 99.3 2.2E-10 4.8E-15 103.0 16.2 78 67-146 279-373 (767)
119 PF09752 DUF2048: Uncharacteri 99.3 1E-09 2.2E-14 87.4 17.8 243 35-302 90-345 (348)
120 PF02273 Acyl_transf_2: Acyl t 99.3 3.3E-10 7.2E-15 84.4 14.0 220 22-284 11-239 (294)
121 PF12740 Chlorophyllase2: Chlo 99.2 5.2E-11 1.1E-15 91.4 9.5 106 32-146 12-131 (259)
122 KOG1515 Arylacetamide deacetyl 99.2 1.7E-09 3.7E-14 87.1 18.4 240 21-306 71-335 (336)
123 COG0657 Aes Esterase/lipase [L 99.2 1.8E-09 3.9E-14 88.3 18.7 109 35-150 77-195 (312)
124 PF06028 DUF915: Alpha/beta hy 99.2 2.7E-09 5.9E-14 82.9 15.5 108 37-146 11-143 (255)
125 PF10503 Esterase_phd: Esteras 99.2 3.1E-09 6.8E-14 80.6 15.1 107 36-144 15-130 (220)
126 PF05990 DUF900: Alpha/beta hy 99.1 1.1E-09 2.5E-14 84.6 11.9 112 35-146 16-137 (233)
127 KOG3043 Predicted hydrolase re 99.1 2.7E-09 5.8E-14 78.6 13.0 197 16-307 20-241 (242)
128 KOG2551 Phospholipase/carboxyh 99.1 7.8E-09 1.7E-13 76.2 15.4 185 36-307 4-225 (230)
129 KOG2100 Dipeptidyl aminopeptid 99.1 8.9E-09 1.9E-13 92.6 16.3 227 13-308 497-749 (755)
130 PF03403 PAF-AH_p_II: Platelet 99.1 1.4E-08 3.1E-13 84.2 16.4 107 35-145 98-261 (379)
131 KOG1553 Predicted alpha/beta h 99.0 2.1E-09 4.6E-14 84.1 10.1 123 14-143 215-342 (517)
132 PF07224 Chlorophyllase: Chlor 99.0 2.4E-09 5.1E-14 80.8 8.9 107 34-149 43-160 (307)
133 PF00151 Lipase: Lipase; Inte 99.0 1E-09 2.3E-14 89.0 7.3 113 34-147 68-188 (331)
134 PLN02733 phosphatidylcholine-s 99.0 2.3E-09 5.1E-14 89.9 9.1 94 48-148 105-203 (440)
135 PF01674 Lipase_2: Lipase (cla 99.0 9.1E-10 2E-14 83.4 5.6 89 39-132 3-96 (219)
136 PF06057 VirJ: Bacterial virul 99.0 5.4E-08 1.2E-12 70.9 14.0 98 38-144 3-105 (192)
137 PF05677 DUF818: Chlamydia CHL 98.9 3.3E-07 7.2E-12 72.5 18.0 112 19-133 117-237 (365)
138 PRK04940 hypothetical protein; 98.9 6.1E-07 1.3E-11 65.3 17.7 89 40-147 2-93 (180)
139 PF03583 LIP: Secretory lipase 98.9 3E-07 6.6E-12 73.8 17.6 61 241-308 217-283 (290)
140 PF08840 BAAT_C: BAAT / Acyl-C 98.8 1.2E-08 2.6E-13 78.1 7.6 53 93-146 4-56 (213)
141 smart00824 PKS_TE Thioesterase 98.8 6.5E-08 1.4E-12 74.4 11.2 94 42-144 2-100 (212)
142 KOG4840 Predicted hydrolases o 98.8 1.2E-07 2.6E-12 69.8 11.4 107 34-147 33-145 (299)
143 PF00450 Peptidase_S10: Serine 98.8 5.4E-06 1.2E-10 70.8 23.4 129 16-148 13-183 (415)
144 PF11339 DUF3141: Protein of u 98.8 2E-06 4.3E-11 71.8 19.3 83 60-149 93-178 (581)
145 PF00756 Esterase: Putative es 98.8 9.6E-08 2.1E-12 75.6 10.5 114 34-147 21-151 (251)
146 PF12715 Abhydrolase_7: Abhydr 98.7 8.5E-08 1.8E-12 77.4 9.4 106 34-143 112-257 (390)
147 KOG2112 Lysophospholipase [Lip 98.7 7.2E-07 1.6E-11 65.6 13.1 104 37-144 3-126 (206)
148 PF05057 DUF676: Putative seri 98.7 4.8E-08 1E-12 75.1 7.0 93 35-130 2-97 (217)
149 COG3509 LpqC Poly(3-hydroxybut 98.6 8.2E-07 1.8E-11 68.8 11.6 124 20-146 41-179 (312)
150 COG4782 Uncharacterized protei 98.6 7.4E-07 1.6E-11 71.0 11.0 111 35-146 114-234 (377)
151 KOG3253 Predicted alpha/beta h 98.6 1.9E-06 4.2E-11 72.8 13.6 185 37-308 176-376 (784)
152 COG1075 LipA Predicted acetylt 98.5 6.2E-07 1.4E-11 73.5 8.4 98 37-144 59-162 (336)
153 COG4099 Predicted peptidase [G 98.4 2.5E-06 5.4E-11 66.0 10.0 115 23-144 171-302 (387)
154 KOG2281 Dipeptidyl aminopeptid 98.4 4E-06 8.6E-11 71.5 11.9 107 35-145 640-761 (867)
155 COG4814 Uncharacterized protei 98.4 2.7E-06 5.9E-11 64.3 9.0 106 37-144 45-174 (288)
156 PF05577 Peptidase_S28: Serine 98.4 1.5E-05 3.3E-10 68.4 14.2 108 37-147 29-149 (434)
157 PF10340 DUF2424: Protein of u 98.4 8.6E-06 1.9E-10 66.4 11.9 110 36-149 121-238 (374)
158 PRK10439 enterobactin/ferric e 98.3 8.7E-06 1.9E-10 68.6 11.6 110 35-145 207-322 (411)
159 KOG1282 Serine carboxypeptidas 98.3 0.00021 4.6E-09 60.3 18.6 131 17-148 47-215 (454)
160 COG4188 Predicted dienelactone 98.3 3.2E-06 7E-11 68.0 7.0 95 36-133 70-181 (365)
161 KOG1551 Uncharacterized conser 98.2 8.8E-05 1.9E-09 56.6 14.0 54 246-304 309-364 (371)
162 KOG3724 Negative regulator of 98.2 5.7E-06 1.2E-10 72.2 8.4 103 37-143 89-217 (973)
163 COG2936 Predicted acyl esteras 98.2 4.2E-06 9.2E-11 71.5 7.5 124 21-147 27-160 (563)
164 PF04301 DUF452: Protein of un 98.2 7.7E-05 1.7E-09 56.2 13.2 79 37-146 11-90 (213)
165 PF12048 DUF3530: Protein of u 98.2 5.2E-05 1.1E-09 61.5 12.5 125 19-144 67-227 (310)
166 KOG3101 Esterase D [General fu 98.2 1E-05 2.2E-10 59.4 7.5 110 35-146 42-176 (283)
167 cd00312 Esterase_lipase Estera 98.1 1E-05 2.2E-10 70.8 8.3 108 35-146 93-213 (493)
168 KOG3847 Phospholipase A2 (plat 98.1 1.1E-05 2.3E-10 63.0 6.0 44 35-81 116-159 (399)
169 PF02450 LCAT: Lecithin:choles 98.0 1.2E-05 2.7E-10 67.5 6.7 85 52-148 66-162 (389)
170 PF02089 Palm_thioest: Palmito 98.0 2.9E-05 6.3E-10 60.8 7.9 103 38-143 6-113 (279)
171 PLN02633 palmitoyl protein thi 98.0 6.4E-05 1.4E-09 59.4 9.8 100 37-143 25-128 (314)
172 COG3150 Predicted esterase [Ge 98.0 2.7E-05 5.8E-10 55.1 6.8 89 40-145 2-90 (191)
173 PF08386 Abhydrolase_4: TAP-li 98.0 3.2E-05 7E-10 51.6 6.6 60 242-305 33-93 (103)
174 COG1073 Hydrolases of the alph 98.0 0.00013 2.9E-09 59.1 11.5 70 237-307 225-298 (299)
175 PLN02606 palmitoyl-protein thi 97.9 0.00013 2.8E-09 57.7 9.4 99 38-143 27-129 (306)
176 COG0627 Predicted esterase [Ge 97.9 3.6E-05 7.8E-10 62.1 6.6 114 34-149 51-190 (316)
177 PF05705 DUF829: Eukaryotic pr 97.9 0.0013 2.7E-08 51.8 15.0 59 241-302 176-239 (240)
178 COG4553 DepA Poly-beta-hydroxy 97.9 0.0054 1.2E-07 47.9 17.2 106 35-148 101-211 (415)
179 KOG2541 Palmitoyl protein thio 97.8 0.00029 6.3E-09 54.1 9.7 99 38-143 24-125 (296)
180 KOG2183 Prolylcarboxypeptidase 97.7 0.00023 5.1E-09 58.0 7.7 110 38-149 81-206 (492)
181 PF00135 COesterase: Carboxyle 97.7 0.00072 1.6E-08 59.9 11.8 118 22-144 107-243 (535)
182 PF10142 PhoPQ_related: PhoPQ- 97.7 0.0026 5.7E-08 52.5 13.8 64 236-306 255-320 (367)
183 PLN03016 sinapoylglucose-malat 97.6 0.00063 1.4E-08 57.9 10.2 113 35-147 64-211 (433)
184 PLN02209 serine carboxypeptida 97.6 0.00057 1.2E-08 58.2 9.7 114 35-148 66-214 (437)
185 PF11288 DUF3089: Protein of u 97.6 0.00036 7.8E-09 52.3 7.1 77 54-132 32-116 (207)
186 cd00741 Lipase Lipase. Lipase 97.6 0.00028 6.2E-09 51.1 6.5 52 92-143 8-64 (153)
187 COG2272 PnbA Carboxylesterase 97.5 0.00047 1E-08 57.9 8.0 116 24-146 80-217 (491)
188 KOG2369 Lecithin:cholesterol a 97.5 0.00027 5.9E-09 58.8 6.5 83 51-143 124-222 (473)
189 COG2939 Carboxypeptidase C (ca 97.5 0.00036 7.8E-09 58.7 7.0 112 36-147 100-237 (498)
190 PLN02517 phosphatidylcholine-s 97.4 0.0004 8.6E-09 59.9 6.2 92 52-148 157-265 (642)
191 KOG3967 Uncharacterized conser 97.4 0.0038 8.2E-08 46.4 10.4 105 35-141 99-222 (297)
192 COG1505 Serine proteases of th 97.4 0.0022 4.8E-08 55.1 10.4 125 19-147 400-536 (648)
193 COG2819 Predicted hydrolase of 97.4 0.00039 8.4E-09 53.9 5.2 50 96-145 122-171 (264)
194 PF07082 DUF1350: Protein of u 97.4 0.0026 5.7E-08 48.8 9.4 97 34-143 14-122 (250)
195 PF01764 Lipase_3: Lipase (cla 97.3 0.00083 1.8E-08 47.8 6.3 24 110-133 63-86 (140)
196 COG2382 Fes Enterochelin ester 97.3 0.00094 2E-08 52.6 6.4 112 35-146 96-212 (299)
197 cd00519 Lipase_3 Lipase (class 97.3 0.0024 5.2E-08 49.8 8.8 55 91-145 107-167 (229)
198 PF11144 DUF2920: Protein of u 97.2 0.0059 1.3E-07 50.5 10.3 30 111-140 184-213 (403)
199 PF11187 DUF2974: Protein of u 97.1 0.0013 2.8E-08 50.6 6.0 45 99-143 72-120 (224)
200 PF01083 Cutinase: Cutinase; 97.1 0.012 2.6E-07 43.7 10.9 103 38-143 6-119 (179)
201 KOG1202 Animal-type fatty acid 97.1 0.067 1.4E-06 50.4 16.7 94 35-143 2121-2216(2376)
202 PF06259 Abhydrolase_8: Alpha/ 96.9 0.044 9.6E-07 40.4 12.1 107 37-143 19-141 (177)
203 KOG2182 Hydrolytic enzymes of 96.9 0.009 2E-07 50.4 9.0 108 35-144 84-205 (514)
204 PF06441 EHN: Epoxide hydrolas 96.9 0.0023 5E-08 43.1 4.5 42 14-55 68-110 (112)
205 COG1770 PtrB Protease II [Amin 96.7 0.0035 7.7E-08 54.6 5.7 110 34-147 445-563 (682)
206 PF04083 Abhydro_lipase: Parti 96.6 0.0034 7.4E-08 37.3 3.3 36 18-53 17-59 (63)
207 PLN02454 triacylglycerol lipas 96.6 0.0077 1.7E-07 50.2 6.5 20 112-131 229-248 (414)
208 PLN02571 triacylglycerol lipas 96.5 0.0077 1.7E-07 50.3 6.0 38 93-131 209-246 (413)
209 COG2830 Uncharacterized protei 96.3 0.22 4.9E-06 35.5 12.2 78 37-145 11-89 (214)
210 COG3946 VirJ Type IV secretory 96.3 0.048 1E-06 45.0 9.3 90 36-134 259-349 (456)
211 KOG2237 Predicted serine prote 96.2 0.0043 9.4E-08 53.8 3.3 111 34-147 467-585 (712)
212 KOG1516 Carboxylesterase and r 96.1 0.04 8.6E-07 49.2 9.0 105 37-143 112-229 (545)
213 KOG4372 Predicted alpha/beta h 96.1 0.01 2.2E-07 48.8 4.5 88 34-128 77-167 (405)
214 PLN02213 sinapoylglucose-malat 96.0 0.038 8.3E-07 45.4 7.7 80 68-147 2-97 (319)
215 PLN00413 triacylglycerol lipas 95.9 0.015 3.3E-07 49.2 5.1 34 94-130 270-303 (479)
216 PLN02162 triacylglycerol lipas 95.9 0.015 3.3E-07 49.1 4.8 22 109-130 276-297 (475)
217 PLN02408 phospholipase A1 95.8 0.017 3.7E-07 47.6 4.8 37 96-133 186-222 (365)
218 PLN02934 triacylglycerol lipas 95.6 0.022 4.8E-07 48.7 4.8 33 95-130 308-340 (515)
219 PLN02324 triacylglycerol lipas 95.6 0.044 9.6E-07 45.9 6.4 35 96-131 201-235 (415)
220 PF05277 DUF726: Protein of un 95.6 0.047 1E-06 44.8 6.4 36 109-144 218-258 (345)
221 PLN02310 triacylglycerol lipas 95.5 0.028 6.1E-07 46.9 5.1 38 94-131 191-229 (405)
222 KOG1283 Serine carboxypeptidas 95.4 0.077 1.7E-06 42.4 6.8 109 35-144 29-164 (414)
223 PLN03037 lipase class 3 family 95.3 0.033 7.1E-07 47.8 4.9 38 94-131 300-338 (525)
224 PLN02802 triacylglycerol lipas 95.3 0.03 6.5E-07 47.9 4.6 21 112-132 331-351 (509)
225 PLN02753 triacylglycerol lipas 95.3 0.035 7.5E-07 47.7 5.0 21 111-131 312-332 (531)
226 PF05576 Peptidase_S37: PS-10 95.1 0.053 1.1E-06 45.0 5.3 107 34-145 60-169 (448)
227 PLN02847 triacylglycerol lipas 94.8 0.4 8.6E-06 42.2 10.0 22 110-131 250-271 (633)
228 PLN02719 triacylglycerol lipas 94.8 0.074 1.6E-06 45.7 5.6 20 112-131 299-318 (518)
229 PLN02761 lipase class 3 family 94.5 0.085 1.8E-06 45.4 5.2 21 111-131 294-314 (527)
230 PF08237 PE-PPE: PE-PPE domain 94.4 0.29 6.3E-06 37.9 7.7 65 67-132 2-69 (225)
231 PF06850 PHB_depo_C: PHB de-po 94.3 0.12 2.6E-06 38.3 5.0 62 243-305 134-201 (202)
232 KOG2521 Uncharacterized conser 94.1 1.5 3.2E-05 36.3 11.5 88 39-129 40-127 (350)
233 PF07519 Tannase: Tannase and 94.0 0.12 2.5E-06 45.0 5.3 85 62-147 54-151 (474)
234 KOG4569 Predicted lipase [Lipi 93.4 0.15 3.3E-06 42.2 4.8 36 93-131 156-191 (336)
235 COG4947 Uncharacterized protei 93.1 0.35 7.5E-06 35.0 5.5 36 111-146 101-136 (227)
236 KOG4388 Hormone-sensitive lipa 92.6 0.45 9.7E-06 41.5 6.5 101 36-143 395-505 (880)
237 KOG2029 Uncharacterized conser 92.6 0.25 5.4E-06 43.1 5.0 54 90-143 505-569 (697)
238 KOG4540 Putative lipase essent 92.5 0.34 7.3E-06 38.2 5.2 47 94-144 261-307 (425)
239 COG5153 CVT17 Putative lipase 92.5 0.34 7.3E-06 38.2 5.2 47 94-144 261-307 (425)
240 COG4287 PqaA PhoPQ-activated p 92.4 1.4 3.1E-05 36.3 8.7 44 240-283 326-371 (507)
241 PRK12467 peptide synthase; Pro 90.5 1.4 2.9E-05 49.3 9.0 95 38-141 3693-3790(3956)
242 PLN02213 sinapoylglucose-malat 88.8 1.2 2.5E-05 36.8 5.6 59 243-306 233-317 (319)
243 COG3673 Uncharacterized conser 85.6 9.2 0.0002 31.2 8.5 94 34-132 28-143 (423)
244 KOG2385 Uncharacterized conser 85.4 2 4.3E-05 37.1 5.1 37 108-144 444-485 (633)
245 PLN02209 serine carboxypeptida 85.1 2.5 5.4E-05 36.5 5.7 58 243-305 351-434 (437)
246 PF09994 DUF2235: Uncharacteri 83.5 11 0.00024 30.4 8.5 43 89-132 71-113 (277)
247 PF09949 DUF2183: Uncharacteri 83.4 11 0.00023 25.0 8.2 71 67-140 24-96 (100)
248 PLN03016 sinapoylglucose-malat 83.0 3.8 8.2E-05 35.4 6.0 59 243-306 347-431 (433)
249 PF06309 Torsin: Torsin; Inte 81.8 15 0.00032 25.5 8.2 74 34-115 49-126 (127)
250 PF05576 Peptidase_S37: PS-10 79.7 3.2 6.9E-05 35.0 4.2 64 238-303 346-411 (448)
251 TIGR03712 acc_sec_asp2 accesso 79.1 43 0.00094 29.3 15.9 101 36-145 288-389 (511)
252 PF07519 Tannase: Tannase and 73.6 13 0.00028 32.7 6.5 72 234-307 344-428 (474)
253 PF10081 Abhydrolase_9: Alpha/ 73.0 5.7 0.00012 31.7 3.8 53 94-146 92-147 (289)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 70.1 7.1 0.00015 32.0 3.9 33 98-133 33-65 (306)
255 cd07198 Patatin Patatin-like p 68.3 9.4 0.0002 28.1 4.0 32 99-133 17-48 (172)
256 COG2240 PdxK Pyridoxal/pyridox 68.2 45 0.00098 26.9 7.8 98 42-150 10-117 (281)
257 PRK10279 hypothetical protein; 67.4 8.4 0.00018 31.5 3.8 33 99-134 24-56 (300)
258 cd07227 Pat_Fungal_NTE1 Fungal 65.6 10 0.00022 30.4 3.9 32 98-132 28-59 (269)
259 cd07207 Pat_ExoU_VipD_like Exo 62.8 12 0.00027 28.0 3.9 22 112-133 28-49 (194)
260 cd07210 Pat_hypo_W_succinogene 62.8 14 0.00031 28.6 4.2 22 112-133 29-50 (221)
261 COG1448 TyrB Aspartate/tyrosin 62.5 40 0.00086 28.4 6.7 86 36-143 170-262 (396)
262 smart00827 PKS_AT Acyl transfe 62.1 12 0.00025 30.5 3.8 22 108-130 80-101 (298)
263 COG4822 CbiK Cobalamin biosynt 60.3 74 0.0016 24.5 7.1 42 34-77 135-177 (265)
264 TIGR03131 malonate_mdcH malona 60.2 14 0.0003 30.1 3.9 20 111-130 76-95 (295)
265 TIGR02883 spore_cwlD N-acetylm 59.9 33 0.00071 25.8 5.6 14 69-83 1-14 (189)
266 PF00698 Acyl_transf_1: Acyl t 59.7 7.6 0.00016 32.0 2.4 19 111-129 84-102 (318)
267 COG1576 Uncharacterized conser 59.6 45 0.00097 24.1 5.7 61 54-127 54-114 (155)
268 cd07228 Pat_NTE_like_bacteria 57.1 17 0.00038 26.8 3.7 22 112-133 29-50 (175)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 56.8 18 0.00039 27.9 3.9 32 99-133 17-48 (215)
270 COG1752 RssA Predicted esteras 55.7 18 0.00039 29.7 3.9 31 100-133 31-61 (306)
271 COG0529 CysC Adenylylsulfate k 55.6 86 0.0019 23.5 7.6 38 35-74 20-58 (197)
272 TIGR00128 fabD malonyl CoA-acy 54.2 18 0.0004 29.2 3.7 21 111-131 83-103 (290)
273 cd07212 Pat_PNPLA9 Patatin-lik 53.4 12 0.00025 30.9 2.4 21 113-133 34-54 (312)
274 PRK06731 flhF flagellar biosyn 52.7 94 0.002 25.1 7.3 63 67-141 154-218 (270)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 52.5 27 0.00058 25.8 4.1 21 112-132 29-49 (175)
276 cd07224 Pat_like Patatin-like 52.3 26 0.00056 27.5 4.1 23 112-134 30-52 (233)
277 PF01583 APS_kinase: Adenylyls 51.6 29 0.00064 25.2 3.9 37 37-75 1-38 (156)
278 COG4188 Predicted dienelactone 51.0 10 0.00022 31.7 1.7 54 237-290 245-302 (365)
279 COG0218 Predicted GTPase [Gene 50.9 22 0.00048 26.9 3.3 59 239-305 131-198 (200)
280 PLN02748 tRNA dimethylallyltra 50.2 1.3E+02 0.0029 26.5 8.3 79 36-119 20-120 (468)
281 cd07230 Pat_TGL4-5_like Triacy 50.1 18 0.0004 31.2 3.2 29 109-138 100-128 (421)
282 PF08484 Methyltransf_14: C-me 49.8 66 0.0014 23.5 5.6 48 92-140 51-98 (160)
283 COG3933 Transcriptional antite 49.5 1.4E+02 0.0031 25.9 8.0 77 35-129 107-183 (470)
284 cd01714 ETF_beta The electron 49.4 59 0.0013 24.8 5.6 63 68-142 78-145 (202)
285 PF05707 Zot: Zonular occluden 49.3 31 0.00066 26.0 4.0 39 40-79 2-40 (193)
286 PRK14729 miaA tRNA delta(2)-is 47.7 1.6E+02 0.0034 24.3 8.0 75 39-119 5-101 (300)
287 PF14253 AbiH: Bacteriophage a 47.5 19 0.00042 28.7 2.8 13 111-123 235-247 (270)
288 COG3887 Predicted signaling pr 47.1 61 0.0013 29.2 5.7 49 94-144 322-376 (655)
289 TIGR03709 PPK2_rel_1 polyphosp 46.4 43 0.00093 26.8 4.4 39 35-75 53-92 (264)
290 cd07208 Pat_hypo_Ecoli_yjju_li 46.1 35 0.00076 27.2 4.1 24 112-135 28-51 (266)
291 PF03976 PPK2: Polyphosphate k 44.7 26 0.00056 27.4 3.0 38 37-76 30-68 (228)
292 PF08386 Abhydrolase_4: TAP-li 43.7 61 0.0013 21.5 4.3 43 37-81 34-76 (103)
293 PF13207 AAA_17: AAA domain; P 43.6 94 0.002 20.9 5.5 74 40-117 1-77 (121)
294 PF12692 Methyltransf_17: S-ad 43.6 75 0.0016 22.9 4.7 68 49-125 39-106 (160)
295 PF04270 Strep_his_triad: Stre 43.0 40 0.00087 19.3 2.8 32 273-305 21-52 (53)
296 cd07232 Pat_PLPL Patain-like p 42.8 28 0.0006 30.0 3.1 29 112-140 96-124 (407)
297 TIGR03707 PPK2_P_aer polyphosp 42.7 50 0.0011 25.8 4.2 71 37-124 30-102 (230)
298 PRK00091 miaA tRNA delta(2)-is 42.6 1.7E+02 0.0036 24.2 7.4 74 38-116 4-99 (307)
299 KOG2872 Uroporphyrinogen decar 42.6 92 0.002 25.2 5.6 72 36-119 251-336 (359)
300 cd07218 Pat_iPLA2 Calcium-inde 41.2 56 0.0012 25.9 4.4 20 114-133 33-52 (245)
301 PRK10319 N-acetylmuramoyl-l-al 41.0 85 0.0018 25.6 5.5 16 67-83 55-70 (287)
302 cd07231 Pat_SDP1-like Sugar-De 40.7 22 0.00047 29.3 2.1 22 112-133 97-118 (323)
303 cd07229 Pat_TGL3_like Triacylg 40.3 34 0.00074 29.2 3.2 29 112-140 112-140 (391)
304 PHA00350 putative assembly pro 38.8 56 0.0012 28.0 4.3 38 40-78 3-40 (399)
305 TIGR02816 pfaB_fam PfaB family 37.9 43 0.00094 30.0 3.6 24 108-132 263-286 (538)
306 cd07206 Pat_TGL3-4-5_SDP1 Tria 37.4 46 0.001 27.2 3.5 22 112-133 98-119 (298)
307 COG4099 Predicted peptidase [G 36.8 15 0.00032 29.8 0.6 26 243-268 315-340 (387)
308 PF03283 PAE: Pectinacetyleste 36.8 89 0.0019 26.5 5.2 36 94-130 139-175 (361)
309 COG0331 FabD (acyl-carrier-pro 36.6 49 0.0011 27.3 3.5 21 110-130 84-104 (310)
310 PLN02840 tRNA dimethylallyltra 36.1 2.9E+02 0.0062 24.1 8.0 78 37-119 20-119 (421)
311 cd07217 Pat17_PNPLA8_PNPLA9_li 36.1 33 0.00071 28.8 2.5 19 114-132 44-62 (344)
312 PRK11613 folP dihydropteroate 36.0 2.4E+02 0.0052 23.0 7.8 50 65-125 174-225 (282)
313 COG2939 Carboxypeptidase C (ca 36.0 39 0.00085 29.6 3.0 58 244-305 426-490 (498)
314 PF02590 SPOUT_MTase: Predicte 35.2 53 0.0011 23.8 3.2 51 59-121 59-109 (155)
315 PF00326 Peptidase_S9: Prolyl 34.5 1.4E+02 0.0031 22.6 5.8 64 36-105 143-209 (213)
316 PRK05282 (alpha)-aspartyl dipe 34.5 2.3E+02 0.005 22.3 7.3 87 36-128 30-129 (233)
317 PRK00103 rRNA large subunit me 34.4 1.5E+02 0.0033 21.6 5.4 54 57-122 57-110 (157)
318 KOG2805 tRNA (5-methylaminomet 34.4 2.7E+02 0.0058 23.1 7.1 62 36-105 5-66 (377)
319 cd07213 Pat17_PNPLA8_PNPLA9_li 33.9 37 0.0008 27.6 2.5 21 113-133 36-56 (288)
320 cd01819 Patatin_and_cPLA2 Pata 33.3 85 0.0018 22.6 4.1 19 111-129 28-46 (155)
321 cd02952 TRP14_like Human TRX-r 32.8 1E+02 0.0022 21.2 4.1 40 36-75 21-68 (119)
322 PF01734 Patatin: Patatin-like 32.5 41 0.00089 24.8 2.5 22 111-132 27-48 (204)
323 PRK13938 phosphoheptose isomer 32.5 1.7E+02 0.0036 22.3 5.6 40 93-133 29-68 (196)
324 KOG1752 Glutaredoxin and relat 32.5 1.4E+02 0.003 20.0 4.5 78 36-132 13-90 (104)
325 cd02696 MurNAc-LAA N-acetylmur 32.3 1.5E+02 0.0032 21.7 5.3 47 71-118 2-50 (172)
326 cd07211 Pat_PNPLA8 Patatin-lik 32.0 39 0.00084 27.8 2.3 17 114-130 44-60 (308)
327 COG0796 MurI Glutamate racemas 31.9 1.2E+02 0.0027 24.3 4.9 60 244-306 6-66 (269)
328 PF00004 AAA: ATPase family as 31.6 1.7E+02 0.0036 19.8 5.7 35 41-79 1-35 (132)
329 cd07204 Pat_PNPLA_like Patatin 31.1 51 0.0011 26.0 2.7 21 113-133 33-53 (243)
330 TIGR00174 miaA tRNA isopenteny 31.0 2.5E+02 0.0054 23.0 6.6 75 40-119 1-97 (287)
331 COG0482 TrmU Predicted tRNA(5- 30.9 2.4E+02 0.0052 23.9 6.6 37 37-80 4-40 (356)
332 cd07221 Pat_PNPLA3 Patatin-lik 30.7 96 0.0021 24.7 4.2 22 112-133 33-54 (252)
333 cd07222 Pat_PNPLA4 Patatin-lik 30.6 82 0.0018 24.9 3.8 23 113-136 33-55 (246)
334 PF05577 Peptidase_S28: Serine 30.4 73 0.0016 27.7 3.9 42 244-288 377-419 (434)
335 PRK10416 signal recognition pa 30.1 3.2E+02 0.007 22.7 8.4 76 60-141 189-266 (318)
336 TIGR02764 spore_ybaN_pdaB poly 30.1 51 0.0011 24.7 2.6 33 39-74 153-188 (191)
337 cd03818 GT1_ExpC_like This fam 30.1 3.5E+02 0.0075 23.0 8.6 36 40-80 2-37 (396)
338 PF07931 CPT: Chloramphenicol 29.7 66 0.0014 23.9 3.0 33 40-74 3-35 (174)
339 PF09370 TIM-br_sig_trns: TIM- 28.9 1.4E+02 0.0031 23.9 4.7 75 60-141 166-245 (268)
340 PRK06762 hypothetical protein; 28.6 82 0.0018 22.8 3.4 35 38-74 2-36 (166)
341 COG0626 MetC Cystathionine bet 28.6 65 0.0014 27.6 3.1 62 58-126 273-345 (396)
342 PF00448 SRP54: SRP54-type pro 28.4 2.7E+02 0.0058 21.1 7.3 64 66-141 82-147 (196)
343 cd01520 RHOD_YbbB Member of th 28.2 1E+02 0.0023 21.2 3.7 34 34-74 84-118 (128)
344 COG3340 PepE Peptidase E [Amin 27.9 1.2E+02 0.0025 23.5 4.0 38 37-75 32-70 (224)
345 cd02949 TRX_NTR TRX domain, no 27.7 1.7E+02 0.0037 18.7 4.7 41 35-75 12-53 (97)
346 COG1709 Predicted transcriptio 27.5 3E+02 0.0064 21.4 5.9 57 12-72 169-225 (241)
347 PF03880 DbpA: DbpA RNA bindin 27.2 62 0.0013 19.8 2.1 53 247-299 4-59 (74)
348 COG5023 Tubulin [Cytoskeleton] 27.2 1.2E+02 0.0026 25.6 4.2 53 92-144 110-171 (443)
349 PF06792 UPF0261: Uncharacteri 26.8 4.2E+02 0.0091 22.9 9.8 98 41-141 4-125 (403)
350 PF10686 DUF2493: Protein of u 26.7 1.1E+02 0.0024 18.7 3.1 10 38-47 32-41 (71)
351 PF00091 Tubulin: Tubulin/FtsZ 26.2 1.4E+02 0.0031 23.0 4.4 36 93-128 105-141 (216)
352 PF09825 BPL_N: Biotin-protein 26.0 4.2E+02 0.0091 22.6 7.3 35 40-74 3-37 (367)
353 PRK14974 cell division protein 25.8 4E+02 0.0087 22.4 7.9 64 66-141 221-286 (336)
354 COG4075 Uncharacterized conser 25.7 1.3E+02 0.0029 19.6 3.3 45 68-119 29-73 (110)
355 KOG4389 Acetylcholinesterase/B 25.7 2.8E+02 0.0061 24.8 6.2 15 110-124 217-231 (601)
356 PLN02752 [acyl-carrier protein 25.6 56 0.0012 27.3 2.3 18 113-130 126-143 (343)
357 PF08433 KTI12: Chromatin asso 25.5 2.9E+02 0.0062 22.3 6.1 39 39-79 2-41 (270)
358 cd07220 Pat_PNPLA2 Patatin-lik 25.0 71 0.0015 25.4 2.6 22 112-133 37-58 (249)
359 PF03681 UPF0150: Uncharacteri 24.9 1.3E+02 0.0028 16.4 3.5 34 66-105 12-45 (48)
360 TIGR00246 tRNA_RlmH_YbeA rRNA 24.9 2.7E+02 0.0059 20.2 5.3 51 59-123 58-108 (153)
361 TIGR02873 spore_ylxY probable 24.5 91 0.002 25.1 3.1 33 39-74 232-264 (268)
362 TIGR01425 SRP54_euk signal rec 24.2 3.8E+02 0.0083 23.5 6.9 64 66-141 181-246 (429)
363 PLN02200 adenylate kinase fami 24.0 1.5E+02 0.0032 23.3 4.1 26 37-64 42-67 (234)
364 cd07216 Pat17_PNPLA8_PNPLA9_li 23.5 57 0.0012 26.8 1.9 17 114-130 45-61 (309)
365 PF10691 DUF2497: Protein of u 23.5 43 0.00094 20.6 0.9 21 289-309 37-57 (73)
366 TIGR02884 spore_pdaA delta-lac 23.3 1E+02 0.0022 23.9 3.2 34 38-74 187-221 (224)
367 PF13709 DUF4159: Domain of un 23.3 2E+02 0.0044 22.1 4.7 38 242-279 52-90 (207)
368 PF08348 PAS_6: YheO-like PAS 23.1 1.4E+02 0.003 20.5 3.4 31 51-81 3-33 (118)
369 PF04084 ORC2: Origin recognit 23.0 4.5E+02 0.0098 22.0 7.6 81 41-124 57-150 (326)
370 PF06833 MdcE: Malonate decarb 22.9 2.5E+02 0.0053 22.1 5.0 63 66-131 64-129 (234)
371 cd07199 Pat17_PNPLA8_PNPLA9_li 22.9 70 0.0015 25.4 2.3 18 114-131 37-54 (258)
372 PRK10431 N-acetylmuramoyl-l-al 22.8 1.8E+02 0.004 25.5 4.8 14 69-83 192-205 (445)
373 PF02230 Abhydrolase_2: Phosph 22.6 3.5E+02 0.0076 20.6 6.8 60 37-105 155-215 (216)
374 PRK00889 adenylylsulfate kinas 22.5 1.8E+02 0.004 21.2 4.3 36 37-74 3-39 (175)
375 cd01523 RHOD_Lact_B Member of 22.2 1.4E+02 0.0031 19.2 3.3 29 35-70 60-88 (100)
376 cd08769 DAP_dppA_2 Peptidase M 22.0 3.2E+02 0.0069 22.1 5.6 61 239-305 143-206 (270)
377 cd06143 PAN2_exo DEDDh 3'-5' e 21.9 1.1E+02 0.0024 22.8 2.8 11 112-122 102-112 (174)
378 cd01535 4RHOD_Repeat_4 Member 21.7 2.6E+02 0.0056 19.9 4.7 60 63-129 5-66 (145)
379 PRK00131 aroK shikimate kinase 21.6 1.4E+02 0.0029 21.7 3.5 34 38-75 4-37 (175)
380 COG4667 Predicted esterase of 21.6 47 0.001 26.5 1.0 28 113-140 42-69 (292)
381 KOG1753 40S ribosomal protein 21.5 59 0.0013 22.5 1.3 20 267-286 60-81 (145)
382 PRK14581 hmsF outer membrane N 21.4 2.2E+02 0.0047 26.6 5.1 82 34-120 45-144 (672)
383 PRK10886 DnaA initiator-associ 21.2 3.4E+02 0.0074 20.6 5.5 38 94-132 26-63 (196)
384 cd03146 GAT1_Peptidase_E Type 21.2 3.9E+02 0.0084 20.5 7.8 88 35-127 29-129 (212)
385 PF13580 SIS_2: SIS domain; PD 21.1 3E+02 0.0066 19.3 5.2 37 96-133 22-58 (138)
386 PF00070 Pyr_redox: Pyridine n 21.1 82 0.0018 19.4 1.9 29 112-143 1-29 (80)
387 cd02993 PDI_a_APS_reductase PD 21.0 1.2E+02 0.0025 20.2 2.7 41 35-75 20-62 (109)
388 cd07214 Pat17_isozyme_like Pat 20.8 71 0.0015 26.9 2.0 19 114-132 46-64 (349)
389 KOG1465 Translation initiation 20.8 4.9E+02 0.011 21.5 6.4 31 40-74 165-195 (353)
390 PRK05579 bifunctional phosphop 20.7 5.6E+02 0.012 22.2 9.2 48 67-118 146-196 (399)
391 cd02190 epsilon_tubulin The tu 20.7 4.3E+02 0.0093 22.7 6.5 33 92-124 79-112 (379)
392 cd07215 Pat17_PNPLA8_PNPLA9_li 20.4 78 0.0017 26.3 2.1 17 114-130 43-59 (329)
393 KOG1336 Monodehydroascorbate/f 20.2 2.2E+02 0.0047 25.1 4.6 46 94-144 199-244 (478)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=9.4e-37 Score=246.98 Aligned_cols=273 Identities=14% Similarity=0.142 Sum_probs=177.2
Q ss_pred ccccccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCC----
Q 021479 10 SNKSVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH---- 85 (312)
Q Consensus 10 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~---- 85 (312)
|...++.++++++|..+.|...++ ++++|||+||++++...|..+ .+.|.+.|+|+++|+||||.|+...
T Consensus 4 ~~~~~~~~~~~~~~~~i~y~~~G~--~~~~vlllHG~~~~~~~w~~~----~~~L~~~~~vi~~DlpG~G~S~~~~~~~~ 77 (294)
T PLN02824 4 PEPQVETRTWRWKGYNIRYQRAGT--SGPALVLVHGFGGNADHWRKN----TPVLAKSHRVYAIDLLGYGYSDKPNPRSA 77 (294)
T ss_pred CCCCCCCceEEEcCeEEEEEEcCC--CCCeEEEECCCCCChhHHHHH----HHHHHhCCeEEEEcCCCCCCCCCCccccc
Confidence 455677889999999988877664 246899999999999999994 4455557999999999999997432
Q ss_pred --CCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhh
Q 021479 86 --GRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAA 163 (312)
Q Consensus 86 --~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 163 (312)
...++++++++++.++++++ .. ++++|+||||||.+++.+|.++|++|+++|+++|............ ..
T Consensus 78 ~~~~~~~~~~~a~~l~~~l~~l--~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~---- 149 (294)
T PLN02824 78 PPNSFYTFETWGEQLNDFCSDV--VG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LG---- 149 (294)
T ss_pred cccccCCHHHHHHHHHHHHHHh--cC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hh----
Confidence 23689999999999999998 55 4899999999999999999999999999999987532111110000 00
Q ss_pred hhhhhHHHHHH------HHHh-cCCcHHHHHHHHHcccCC--CCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCC
Q 021479 164 SNIASTALSYI------IASL-GILPSKALRFLVSNSLGR--SWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTP 234 (312)
Q Consensus 164 ~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (312)
.+....+...+ ..+. ...........+...+.. ...+.................... .+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 224 (294)
T PLN02824 150 RPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFL-----DFISYSGGP 224 (294)
T ss_pred hHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHH-----HHhcccccc
Confidence 00000000000 0000 000000111111111111 111111111111011111000100 111111112
Q ss_pred C-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 235 D-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 235 ~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
. .+.++++++|+++|+|++|.++|.+..+.+.+..++++++ ++++||..++|+|+ ++.+.|.+|+++
T Consensus 225 ~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 293 (294)
T PLN02824 225 LPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPE----LVNPLIESFVAR 293 (294)
T ss_pred chHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHH----HHHHHHHHHHhc
Confidence 2 3568899999999999999999999999998888888988 99999999999877 788888888865
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.1e-35 Score=238.55 Aligned_cols=264 Identities=11% Similarity=0.055 Sum_probs=171.7
Q ss_pred cceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHH
Q 021479 15 NLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQ 94 (312)
Q Consensus 15 ~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~ 94 (312)
..++.+++|.+++|..++....+++|||+||++++...|.+ +.+.|.++|+|+++|+||||.|+ .+...++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~----~~~~L~~~~~vi~~Dl~G~G~S~-~~~~~~~~~~~ 77 (276)
T TIGR02240 3 IFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFP----FIEALDPDLEVIAFDVPGVGGSS-TPRHPYRFPGL 77 (276)
T ss_pred eEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHH----HHHHhccCceEEEECCCCCCCCC-CCCCcCcHHHH
Confidence 35677889999888776543345689999999999999998 66667778999999999999997 34456789999
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHH
Q 021479 95 VEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYI 174 (312)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (312)
++++.++++.+ +.. +++|+||||||.+++.+|.++|++|+++|+++|........... ..............
T Consensus 78 ~~~~~~~i~~l--~~~-~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 149 (276)
T TIGR02240 78 AKLAARMLDYL--DYG-QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP---KVLMMMASPRRYIQ-- 149 (276)
T ss_pred HHHHHHHHHHh--CcC-ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch---hHHHHhcCchhhhc--
Confidence 99999999998 555 79999999999999999999999999999998754321111100 00000000000000
Q ss_pred HHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCC
Q 021479 175 IASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDD 254 (312)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 254 (312)
. . ........ .....+. ..+..................... ..... .....+.++++++|+++++|++|
T Consensus 150 -~-~-~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 150 -P-S-HGIHIAPD-IYGGAFR--RDPELAMAHASKVRSGGKLGYYWQ----LFAGL-GWTSIHWLHKIQQPTLVLAGDDD 218 (276)
T ss_pred -c-c-cccchhhh-hccceee--ccchhhhhhhhhcccCCCchHHHH----HHHHc-CCchhhHhhcCCCCEEEEEeCCC
Confidence 0 0 00000000 0000000 011111111111111110000000 01111 11123557899999999999999
Q ss_pred CCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 255 HWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
+++|++..+.+.+.+|+++++ ++ +||+.++++|+ ++++.|.+|+++.-
T Consensus 219 ~~v~~~~~~~l~~~~~~~~~~~i~-~gH~~~~e~p~----~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 219 PIIPLINMRLLAWRIPNAELHIID-DGHLFLITRAE----AVAPIIMKFLAEER 267 (276)
T ss_pred CcCCHHHHHHHHHhCCCCEEEEEc-CCCchhhccHH----HHHHHHHHHHHHhh
Confidence 999999999999999999988 76 59999999876 78888888887653
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.2e-35 Score=237.53 Aligned_cols=268 Identities=13% Similarity=0.108 Sum_probs=168.9
Q ss_pred ccccccceeeeecc-----ccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC
Q 021479 10 SNKSVNLRLSNVSI-----YTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD 84 (312)
Q Consensus 10 ~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~ 84 (312)
+..+...+++++++ .++.|.+.+.. .+++|||+||++++...|..++..|.+ ++|+|+++|+||||.|+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~i~y~~~G~~-~~~~lvliHG~~~~~~~w~~~~~~L~~---~gy~vi~~Dl~G~G~S~~~ 90 (302)
T PRK00870 15 PDYPFAPHYVDVDDGDGGPLRMHYVDEGPA-DGPPVLLLHGEPSWSYLYRKMIPILAA---AGHRVIAPDLIGFGRSDKP 90 (302)
T ss_pred cCCCCCceeEeecCCCCceEEEEEEecCCC-CCCEEEEECCCCCchhhHHHHHHHHHh---CCCEEEEECCCCCCCCCCC
Confidence 55566788888888 67777766543 357899999999999999995555433 3899999999999999743
Q ss_pred CC-CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhh
Q 021479 85 HG-RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAA 163 (312)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 163 (312)
.. ..++++++++++.++++++ +.. +++|+||||||.+|+.+|.++|++|+++|+++|......... ........
T Consensus 91 ~~~~~~~~~~~a~~l~~~l~~l--~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~- 165 (302)
T PRK00870 91 TRREDYTYARHVEWMRSWFEQL--DLT-DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM-PDAFWAWR- 165 (302)
T ss_pred CCcccCCHHHHHHHHHHHHHHc--CCC-CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc-hHHHhhhh-
Confidence 32 3588999999999999997 555 799999999999999999999999999999986432111000 00000000
Q ss_pred hhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHh--------hhcCCCC
Q 021479 164 SNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFK--------QLKNTPD 235 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 235 (312)
.+....+..................+..... ............... ...+. .......
T Consensus 166 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (302)
T PRK00870 166 ------------AFSQYSPVLPVGRLVNGGTVRDLSDAVRAAY-DAPFPDESYKAGARA-FPLLVPTSPDDPAVAANRAA 231 (302)
T ss_pred ------------cccccCchhhHHHHhhccccccCCHHHHHHh-hcccCChhhhcchhh-hhhcCCCCCCCcchHHHHHH
Confidence 0000001000000110000011111111110 000000000000000 00000 0000011
Q ss_pred hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc---ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 236 WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP---LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 236 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~---~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
+..+.++++|+++|+|++|.++|... +.+.+.+++.+ ++ ++++||+.++++|+ ++.+.|.+||++
T Consensus 232 ~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~l~~fl~~ 300 (302)
T PRK00870 232 WAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGE----ELAEAVLEFIRA 300 (302)
T ss_pred HHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChH----HHHHHHHHHHhc
Confidence 34567899999999999999999876 88899899876 66 89999999999876 778888888865
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.8e-35 Score=235.31 Aligned_cols=274 Identities=11% Similarity=0.077 Sum_probs=168.9
Q ss_pred ccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHH
Q 021479 14 VNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDE 93 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (312)
.+.++.+++|.++.|...+. +++|||+||++++...|+.+ .+.|.+.++|+++|+||||.|+. +...+++++
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~---g~~vvllHG~~~~~~~w~~~----~~~L~~~~~via~D~~G~G~S~~-~~~~~~~~~ 78 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGE---GDPIVFLHGNPTSSYLWRNI----IPHLAGLGRCLAPDLIGMGASDK-PDIDYTFAD 78 (295)
T ss_pred CcceEEEECCEEEEEEEeCC---CCEEEEECCCCCCHHHHHHH----HHHHhhCCEEEEEcCCCCCCCCC-CCCCCCHHH
Confidence 34566778888888877763 46899999999999999994 44455567999999999999983 444689999
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHH
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSY 173 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (312)
+++++.++++++ ... +++++||||||.+|+.+|.++|++|+++|+++|........... ... ......+...
T Consensus 79 ~a~dl~~ll~~l--~~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~---~~~--~~~~~~~~~~ 150 (295)
T PRK03592 79 HARYLDAWFDAL--GLD-DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFP---PAV--RELFQALRSP 150 (295)
T ss_pred HHHHHHHHHHHh--CCC-CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcc---hhH--HHHHHHHhCc
Confidence 999999999998 554 89999999999999999999999999999999733211000000 000 0000000000
Q ss_pred H-HHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHH--------HHhhhcCCCCh-hhhhhcC
Q 021479 174 I-IASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMT--------EFKQLKNTPDW-AFMRENQ 243 (312)
Q Consensus 174 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~l~~i~ 243 (312)
. ...............+.........++........................ ...... .++ ..+.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~ 228 (295)
T PRK03592 151 GEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALV--EEYAQWLATSD 228 (295)
T ss_pred ccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhh--hHhHHHhccCC
Confidence 0 000000000001111111111112222222221111111111111111000 000000 111 4467899
Q ss_pred CcEEEEeecCCCCCChhHHHH-HHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhccC
Q 021479 244 SKIAFLFGVDDHWGPQELYEE-ISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIPS 309 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~-~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~~ 309 (312)
+|+++|+|++|.++++..... +.+..++++++ ++++||++++++|+ ++++.+.+|+++....
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPE----EIGAAIAAWLRRLRLA 292 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHH----HHHHHHHHHHHHhccc
Confidence 999999999999995554444 45567889988 89999999999876 8888888888876544
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.5e-34 Score=234.61 Aligned_cols=275 Identities=16% Similarity=0.163 Sum_probs=167.0
Q ss_pred ceeeeeccc-cceeeeecCC---CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcch
Q 021479 16 LRLSNVSIY-TAEVLEIEAD---DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSL 91 (312)
Q Consensus 16 ~~~~~~~g~-~~~~~~~~~~---~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~ 91 (312)
.+++..+|. +++|.+.++. ..+++|||+||++++...|.+ +.+.|.++|+|+++|+||||.|+......+++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~----~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~ 138 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRR----NIGVLAKNYTVYAIDLLGFGASDKPPGFSYTM 138 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHH----HHHHHhcCCEEEEECCCCCCCCCCCCCccccH
Confidence 344455666 7777776643 134789999999999999999 55556668999999999999997444457899
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHh-ccccceEEEEecccccccCCCCcccccchh-hh-hhhhh
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKR-SSEKVIYYIGLYPFLALIRPSVTQSIIGRV-AA-SNIAS 168 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~-~~-~~~~~ 168 (312)
+++++++.++++++ ... +++|+||||||.+++.++.. +|++|+++|+++|................. .. ...+.
T Consensus 139 ~~~a~~l~~~l~~l--~~~-~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
T PLN02679 139 ETWAELILDFLEEV--VQK-PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLID 215 (360)
T ss_pred HHHHHHHHHHHHHh--cCC-CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHH
Confidence 99999999999998 555 89999999999999999874 799999999998643211110000000000 00 00000
Q ss_pred HHHH---HHHHHhc-CCcHHHHHHHHHcccCC--CCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCC-hhhhhh
Q 021479 169 TALS---YIIASLG-ILPSKALRFLVSNSLGR--SWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPD-WAFMRE 241 (312)
Q Consensus 169 ~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 241 (312)
.+.. ....... .......+.++...+.. ...++.................... .+.. ....+ ...+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~l~~ 290 (360)
T PLN02679 216 FLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVS----IVTG-PPGPNPIKLIPR 290 (360)
T ss_pred HHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHH----HHhc-CCCCCHHHHhhh
Confidence 0000 0000000 00111111111111111 1111111111111111111111010 0111 11122 356789
Q ss_pred cCCcEEEEeecCCCCCChhH-----HHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 242 NQSKIAFLFGVDDHWGPQEL-----YEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 242 i~~P~lii~G~~D~~~~~~~-----~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
+++|+|+++|++|.++|++. .+.+.+.+|++++. ++++||++++|+|+ ++++.|.+||++.
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe----~~~~~I~~FL~~~ 357 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPD----LVHEKLLPWLAQL 357 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHH----HHHHHHHHHHHhc
Confidence 99999999999999998863 34566778999988 99999999999877 8888888888763
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.3e-34 Score=239.37 Aligned_cols=269 Identities=16% Similarity=0.129 Sum_probs=172.0
Q ss_pred eeeeccccceeeeecCC--CCceEEEEEcCCCCchhc-HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHH
Q 021479 18 LSNVSIYTAEVLEIEAD--DPKLHVLFVPGNPGVITF-YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQ 94 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~~--~~~~~iv~~HG~~~~~~~-~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~ 94 (312)
+.+.+|.++.+..|.+. +++++|||+||++++... |..++..+.+. ||+|+++|+||||.|+.......+++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~---g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASS---GYGVFAMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhC---CCEEEEecCCCCCCCCCCCCCcCCHHHH
Confidence 44567888888888763 457899999999988654 57755555444 8999999999999997444445689999
Q ss_pred HHHHHHHHHHHhhc---CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHH
Q 021479 95 VEHKMDFIRQELQN---TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTAL 171 (312)
Q Consensus 95 ~~~~~~~i~~~~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (312)
++|+.++++.+... ...+++|+||||||.+++.++.++|++++++||++|+.......... .....+.
T Consensus 143 ~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~---------~~~~~~~ 213 (349)
T PLN02385 143 VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPP---------PLVLQIL 213 (349)
T ss_pred HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCc---------hHHHHHH
Confidence 99999999876211 12379999999999999999999999999999999854321110000 0011111
Q ss_pred HHHHHHhcCCcHHHH---HHHHHcccCCCCchhHHHHHHh-hccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEE
Q 021479 172 SYIIASLGILPSKAL---RFLVSNSLGRSWSATAVEAACT-HLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIA 247 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 247 (312)
...... .+.... ..+....+... .......... .............+ +.... .....+.++++|+|
T Consensus 214 ~~~~~~---~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~--~~~~~l~~i~~P~L 283 (349)
T PLN02385 214 ILLANL---LPKAKLVPQKDLAELAFRDL-KKRKMAEYNVIAYKDKPRLRTAVEL----LRTTQ--EIEMQLEEVSLPLL 283 (349)
T ss_pred HHHHHH---CCCceecCCCccccccccCH-HHHHHhhcCcceeCCCcchHHHHHH----HHHHH--HHHHhcccCCCCEE
Confidence 111110 010000 00000000000 0000000000 00000011111111 11110 01244678999999
Q ss_pred EEeecCCCCCChhHHHHHHHhC--CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 248 FLFGVDDHWGPQELYEEISEQV--PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 248 ii~G~~D~~~~~~~~~~~~~~~--~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
+++|++|.++|++..+.+.+.+ ++.+++ ++++||..+.+.|+++.+.+.+.|.+||++..+
T Consensus 284 ii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 284 ILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred EEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999998887 457888 999999999999988778899999999998864
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.4e-34 Score=228.58 Aligned_cols=267 Identities=11% Similarity=0.092 Sum_probs=164.0
Q ss_pred ccccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcch
Q 021479 12 KSVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSL 91 (312)
Q Consensus 12 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~ 91 (312)
-+...++++++|.+++|...+. +++|||+||++.+...|+. +.+.|.++|+|+++|+||||.|+......+++
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G~---~~~iv~lHG~~~~~~~~~~----~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEGT---GPPILLCHGNPTWSFLYRD----IIVALRDRFRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ccccceEEEcCCcEEEEEECCC---CCEEEEECCCCccHHHHHH----HHHHHhCCcEEEEECCCCCCCCCCCCccccCH
Confidence 3466778889999888777653 4789999999988888888 55666668999999999999997444446789
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhh-hhhhhhHH
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVA-ASNIASTA 170 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~ 170 (312)
+++++++.++++++ +.. +++++||||||.+++.++..+|++|+++|+++|..... ............ ..+....+
T Consensus 85 ~~~~~~~~~~~~~~--~~~-~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T PRK03204 85 DEHARVIGEFVDHL--GLD-RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA-DTLAMKAFSRVMSSPPVQYAI 160 (286)
T ss_pred HHHHHHHHHHHHHh--CCC-CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC-CchhHHHHHHHhccccchhhh
Confidence 99999999999987 554 79999999999999999999999999999987542110 000000000000 00000000
Q ss_pred HHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCC-CC-hhhhh--hcCCcE
Q 021479 171 LSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNT-PD-WAFMR--ENQSKI 246 (312)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~--~i~~P~ 246 (312)
.. .......++.........+....... ..................+...... .+ ...+. .+++|+
T Consensus 161 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pt 230 (286)
T PRK03204 161 LR---------RNFFVERLIPAGTEHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPT 230 (286)
T ss_pred hh---------hhHHHHHhccccccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCe
Confidence 00 00011111111011111111221111 1111111111110000000000000 00 01111 138999
Q ss_pred EEEeecCCCCCChh-HHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHH
Q 021479 247 AFLFGVDDHWGPQE-LYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 247 lii~G~~D~~~~~~-~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
++|+|++|.++++. ..+.+.+.+|+.+++ ++++||++++++|+ ++++.|.+|+
T Consensus 231 liI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe----~~~~~i~~~~ 285 (286)
T PRK03204 231 LLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPD----RIAAAIIERF 285 (286)
T ss_pred EEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHH----HHHHHHHHhc
Confidence 99999999988654 578899999999999 99999999999987 6677777775
No 8
>PLN02578 hydrolase
Probab=100.00 E-value=3.2e-33 Score=231.01 Aligned_cols=271 Identities=14% Similarity=0.092 Sum_probs=168.5
Q ss_pred ceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHH
Q 021479 16 LRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQV 95 (312)
Q Consensus 16 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 95 (312)
..+...+|.+++|.+.+ ++++|||+||++++...|.. +.+.|.++|+|+++|+||||.|+ .+...++.+.++
T Consensus 68 ~~~~~~~~~~i~Y~~~g---~g~~vvliHG~~~~~~~w~~----~~~~l~~~~~v~~~D~~G~G~S~-~~~~~~~~~~~a 139 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQG---EGLPIVLIHGFGASAFHWRY----NIPELAKKYKVYALDLLGFGWSD-KALIEYDAMVWR 139 (354)
T ss_pred ceEEEECCEEEEEEEcC---CCCeEEEECCCCCCHHHHHH----HHHHHhcCCEEEEECCCCCCCCC-CcccccCHHHHH
Confidence 46667778877777654 34679999999999999998 44555568999999999999998 344568999999
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCc-ccc---cchhhhhhhhhH--
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVT-QSI---IGRVAASNIAST-- 169 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-~~~---~~~~~~~~~~~~-- 169 (312)
+++.++++.+ .. ++++++||||||.+++.+|.++|++|+++|+++|.......... ... ............
T Consensus 140 ~~l~~~i~~~--~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (354)
T PLN02578 140 DQVADFVKEV--VK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLK 216 (354)
T ss_pred HHHHHHHHHh--cc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHH
Confidence 9999999998 33 48999999999999999999999999999999864322111100 000 000000000000
Q ss_pred -HHHHHH----HHhcCCcHHHHHHHHHcccCC-CCchhHHHHHH-hhccchhHHHHHHHHHHHHHhhhcCCCC-hhhhhh
Q 021479 170 -ALSYII----ASLGILPSKALRFLVSNSLGR-SWSATAVEAAC-THLSQYHVMRNVLFMTMTEFKQLKNTPD-WAFMRE 241 (312)
Q Consensus 170 -~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 241 (312)
...... ......+..... .....+.. ...++...... ............... ...+.......+ .+.+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 294 (354)
T PLN02578 217 EWFQRVVLGFLFWQAKQPSRIES-VLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRL-MSRFLFNQSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHH-HHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHH-HHHHhcCCCCCCHHHHhhc
Confidence 000000 000011111111 11111111 11111111111 111111111111111 001100111122 256789
Q ss_pred cCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 242 NQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 242 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+++|+++++|++|.++|.+..+.+++.+|+++++ + ++||+++.++|+ ++++.|.+|++
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~----~~~~~I~~fl~ 353 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPE----QVNKALLEWLS 353 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHH----HHHHHHHHHHh
Confidence 9999999999999999999999999999999988 7 699999999877 77788888875
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1e-34 Score=230.10 Aligned_cols=244 Identities=12% Similarity=0.105 Sum_probs=149.6
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
-.|||+||++.+...|+.++..|. ..+|+|+++|+||||.|+......++++++++++.++++.+ ...++++|+|
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~---~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l--~~~~~~~lvG 78 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLD---AAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL--PPDHKVILVG 78 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHh---hCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc--CCCCCEEEEe
Confidence 359999999999999999444443 44899999999999999744445688999999999999997 4434899999
Q ss_pred echHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHH-HHHhcCCcH--HHHHHHHHccc
Q 021479 118 HSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYI-IASLGILPS--KALRFLVSNSL 194 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~ 194 (312)
|||||.+++.+|.++|++|+++|++++............ ..... .. ........ .......+. ..........+
T Consensus 79 hSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 79 HSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPR-LKNVM-EG-TEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred cCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHH-HHhhh-hc-cccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 999999999999999999999999886321111000000 00000 00 00000000 000000000 00000000000
Q ss_pred CCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc
Q 021479 195 GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP 273 (312)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 273 (312)
.................... ...+....+. ..+..+++|+++++|++|.++|++..+.+++.+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~ 223 (255)
T PLN02965 156 YNQSPLEDYTLSSKLLRPAP------------VRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQ 223 (255)
T ss_pred hcCCCHHHHHHHHHhcCCCC------------CcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcce
Confidence 00000000000000000000 0000000011 2345789999999999999999999999999999999
Q ss_pred ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 274 LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 274 ~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
++ ++++||++++|+|+ ++++.|.+|+++
T Consensus 224 ~~~i~~~GH~~~~e~p~----~v~~~l~~~~~~ 252 (255)
T PLN02965 224 TYVLEDSDHSAFFSVPT----TLFQYLLQAVSS 252 (255)
T ss_pred EEEecCCCCchhhcCHH----HHHHHHHHHHHH
Confidence 88 89999999999988 666666666554
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=4.8e-33 Score=224.37 Aligned_cols=259 Identities=13% Similarity=0.067 Sum_probs=155.5
Q ss_pred ccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHH
Q 021479 24 YTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIR 103 (312)
Q Consensus 24 ~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~ 103 (312)
.+++|... +.+++|||+||++++...|..++..+...+.++|+|+++|+||||.|+...........+++++.++++
T Consensus 20 ~~~~y~~~---g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 96 (282)
T TIGR03343 20 FRIHYNEA---GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD 96 (282)
T ss_pred eeEEEEec---CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHH
Confidence 44444433 345689999999998888876555454444558999999999999997432221112256788899998
Q ss_pred HHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcH
Q 021479 104 QELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPS 183 (312)
Q Consensus 104 ~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (312)
.+ ... +++++||||||.+++.+|.++|++|+++|+++|...... ........ ....... ........
T Consensus 97 ~l--~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~------~~~~~~~---~~~~~~~~ 163 (282)
T TIGR03343 97 AL--DIE-KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS-LFAPMPME------GIKLLFK---LYAEPSYE 163 (282)
T ss_pred Hc--CCC-CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcc-ccccCchH------HHHHHHH---HhcCCCHH
Confidence 87 555 899999999999999999999999999999986421100 00000000 0000000 00000011
Q ss_pred HHHHHHHHcccCC-CCchhHHHHHHhhccc-hhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhH
Q 021479 184 KALRFLVSNSLGR-SWSATAVEAACTHLSQ-YHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQEL 261 (312)
Q Consensus 184 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 261 (312)
..........+.. ................ ......... ......+......+.++++++|+++++|++|.++|++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~ 241 (282)
T TIGR03343 164 TLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLI--SSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDH 241 (282)
T ss_pred HHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHH--hccccccccchHHHHHhhCCCCEEEEEccCCCcCCchh
Confidence 1111110000111 1111111111100111 110000000 00000011111135678999999999999999999999
Q ss_pred HHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 262 YEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 262 ~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
.+.+++.+|+++++ ++++||+.++++|+ ++.+.|.+||+
T Consensus 242 ~~~~~~~~~~~~~~~i~~agH~~~~e~p~----~~~~~i~~fl~ 281 (282)
T TIGR03343 242 GLKLLWNMPDAQLHVFSRCGHWAQWEHAD----AFNRLVIDFLR 281 (282)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCcccCHH----HHHHHHHHHhh
Confidence 99999999999999 99999999999876 77788888875
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.9e-32 Score=220.49 Aligned_cols=272 Identities=14% Similarity=0.127 Sum_probs=168.7
Q ss_pred ccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHH
Q 021479 14 VNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDE 93 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (312)
-..+++++++.++.+.+.++. ++++|||+||++++...|.. +.+.|.++|+|+++|+||||.|+......+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~-~~~~vv~~hG~~~~~~~~~~----~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPT-AGPLLLLLHGTGASTHSWRD----LMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPS 80 (278)
T ss_pred CccceeeECCEEEEEEecCCC-CCCeEEEEcCCCCCHHHHHH----HHHHHhhCcEEEeecCCCCCCCCCccccCCCHHH
Confidence 345677889998887776543 35789999999999999998 5556666899999999999999854444789999
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHH
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSY 173 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (312)
+++++.++++++ ... +++|+||||||.+++.+|.++|++++++|++++......... ...................
T Consensus 81 ~~~~l~~~i~~~--~~~-~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 81 MAEDLSALCAAE--GLS-PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMA-GTLFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHHHHHHHHHc--CCC-CceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccc-ccccchhhHhhhhcccchH
Confidence 999999999887 444 799999999999999999999999999999886432111100 0000000000000000000
Q ss_pred HHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecC
Q 021479 174 IIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVD 253 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 253 (312)
.............. ..... .......................... ..+.......-...++++++|+++++|++
T Consensus 157 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~P~lii~g~~ 230 (278)
T TIGR03056 157 MMSRGAADQQRVER-LIRDT-GSLLDKAGMTYYGRLIRSPAHVDGAL----SMMAQWDLAPLNRDLPRITIPLHLIAGEE 230 (278)
T ss_pred HHHhhcccCcchhH-Hhhcc-ccccccchhhHHHHhhcCchhhhHHH----HHhhcccccchhhhcccCCCCEEEEEeCC
Confidence 00000000000000 00000 00001000000000000000000000 00100000001245678999999999999
Q ss_pred CCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 254 DHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 254 D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
|..+|++..+.+.+.+++++++ ++++||+.+++.|+ ++.+.|.+|++
T Consensus 231 D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~f~~ 278 (278)
T TIGR03056 231 DKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQAD----GVVGLILQAAE 278 (278)
T ss_pred CcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHH----HHHHHHHHHhC
Confidence 9999999999999999999998 99999999998766 77788888764
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=3.1e-32 Score=228.07 Aligned_cols=278 Identities=15% Similarity=0.140 Sum_probs=163.8
Q ss_pred eeeeeccccceeeeecCCC--CceEEEEEcCCCCchhcHHH-HHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHH
Q 021479 17 RLSNVSIYTAEVLEIEADD--PKLHVLFVPGNPGVITFYKD-FVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDE 93 (312)
Q Consensus 17 ~~~~~~g~~~~~~~~~~~~--~~~~iv~~HG~~~~~~~~~~-~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (312)
.+...++.++++...++.+ .+++|||+||++++...|.. ++..+.+...++|+|+++|+||||.|+......+++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 4555677777888877643 35789999999999999985 34555554455899999999999999844445689999
Q ss_pred HHHHHH-HHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccc--cchhhhhhh----
Q 021479 94 QVEHKM-DFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSI--IGRVAASNI---- 166 (312)
Q Consensus 94 ~~~~~~-~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~--~~~~~~~~~---- 166 (312)
+++++. .+++.+ +.. +++++||||||.+++.+|.++|++|+++|+++|.....+....... .........
T Consensus 259 ~a~~l~~~ll~~l--g~~-k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (481)
T PLN03087 259 HLEMIERSVLERY--KVK-SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPI 335 (481)
T ss_pred HHHHHHHHHHHHc--CCC-CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCcc
Confidence 999995 778877 455 8999999999999999999999999999999864322211100000 000000000
Q ss_pred -hhH----HHHHHHHHhc---CCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-h
Q 021479 167 -AST----ALSYIIASLG---ILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-A 237 (312)
Q Consensus 167 -~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (312)
... +......... .........+.......... .....................+... . ........ .
T Consensus 336 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~~~~~l~~~i~~-~-~~~l~~~l~~ 412 (481)
T PLN03087 336 AFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMR-TFLIEGFFCHTHNAAWHTLHNIICG-S-GSKLDGYLDH 412 (481)
T ss_pred ccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhh-HHHHHHHHhccchhhHHHHHHHHhc-h-hhhhhhHHHH
Confidence 000 0000000000 00000000000000000000 0000000000000000000000000 0 00000112 2
Q ss_pred hhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccc-cccccchHHHHHHHHHHHH
Q 021479 238 FMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNF-CCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 238 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~-~~~~~~~~~v~~~v~~~l~ 304 (312)
.+.++++|+++++|++|.++|++..+.+++.+|+++++ ++++||..++ ++|+ ++++.+.+|.+
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~----~fa~~L~~F~~ 477 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQK----EFARELEEIWR 477 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHH----HHHHHHHHHhh
Confidence 33479999999999999999999999999999999999 9999999886 7766 66666666654
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=5e-33 Score=223.34 Aligned_cols=264 Identities=13% Similarity=0.102 Sum_probs=167.4
Q ss_pred eeeeccccceeeeecC-CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHH
Q 021479 18 LSNVSIYTAEVLEIEA-DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVE 96 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~-~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 96 (312)
++..+|.++.+..|.+ +.++++|+++||+++++..|..++..+.+. ||+|+++|+||||.|+.......++.+.++
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~---g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSL---GILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhC---CCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 5566888888888777 456788888899999999999966666554 899999999999999744333457777888
Q ss_pred HHHHHHHHHhhc-CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHH
Q 021479 97 HKMDFIRQELQN-TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYII 175 (312)
Q Consensus 97 ~~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (312)
|+.+.++..... ...+++|+||||||.+|+.+|.++|++++++|+++|....... .....+.....
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~-------------~~~~~~~~~~~ 148 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV-------------PRLNLLAAKLM 148 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc-------------cHHHHHHHHHH
Confidence 888877764211 2347999999999999999999999999999999985431100 00000000000
Q ss_pred HHhcCCcHHHHHHHHHcccCCCCchhHHHHHH-hhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCC
Q 021479 176 ASLGILPSKALRFLVSNSLGRSWSATAVEAAC-THLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDD 254 (312)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 254 (312)
... .+...........+.. ......... ............... .+..... ...+.+.++++|+++++|++|
T Consensus 149 ~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~l~~i~~Pvliv~G~~D 220 (276)
T PHA02857 149 GIF--YPNKIVGKLCPESVSR--DMDEVYKYQYDPLVNHEKIKAGFAS---QVLKATN-KVRKIIPKIKTPILILQGTNN 220 (276)
T ss_pred HHh--CCCCccCCCCHhhccC--CHHHHHHHhcCCCccCCCccHHHHH---HHHHHHH-HHHHhcccCCCCEEEEecCCC
Confidence 000 0000000000000000 000000000 000000000000000 0000110 112456789999999999999
Q ss_pred CCCChhHHHHHHHhC-CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 255 HWGPQELYEEISEQV-PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~-~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
.++|++..+.+.+.+ +++++. ++++||....|.+ +..+++.+.+.+||+++
T Consensus 221 ~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 221 EISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 999999999998876 467888 9999999999974 45678999999999986
No 14
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-32 Score=226.04 Aligned_cols=271 Identities=13% Similarity=0.112 Sum_probs=170.0
Q ss_pred ceeeeeccccceeeeecCC---CCceEEEEEcCCCCchh-cHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcch
Q 021479 16 LRLSNVSIYTAEVLEIEAD---DPKLHVLFVPGNPGVIT-FYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSL 91 (312)
Q Consensus 16 ~~~~~~~g~~~~~~~~~~~---~~~~~iv~~HG~~~~~~-~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~ 91 (312)
..+...+|.++.+..+.+. .++++|||+||++++.. .|..+...+.+. ||+|+++|+||||.|+.......++
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~---Gy~V~~~D~rGhG~S~~~~~~~~~~ 111 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQM---GFACFALDLEGHGRSEGLRAYVPNV 111 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhC---CCEEEEecCCCCCCCCCccccCCCH
Confidence 3455668888888777653 34788999999987643 456644444443 8999999999999997444445688
Q ss_pred HHHHHHHHHHHHHHhhc---CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhh
Q 021479 92 DEQVEHKMDFIRQELQN---TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIAS 168 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 168 (312)
+++++|+.++++.+... .+.+++|+||||||.+++.++.++|++|+++|+++|........... .. ..
T Consensus 112 ~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------~~-~~ 182 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP--------WP-IP 182 (330)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc--------hH-HH
Confidence 89999999999886321 12379999999999999999999999999999999864322110000 00 00
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHH---h-hccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCC
Q 021479 169 TALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAAC---T-HLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQS 244 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (312)
........+. +...... .................. . .+...........+ +.... .....+.++++
T Consensus 183 ~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~l~~i~~ 252 (330)
T PLN02298 183 QILTFVARFL---PTLAIVP-TADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVEL----LRVTD--YLGKKLKDVSI 252 (330)
T ss_pred HHHHHHHHHC---CCCcccc-CCCcccccccCHHHHHHHHhCccccCCCccHHHHHHH----HHHHH--HHHHhhhhcCC
Confidence 0101011111 0000000 000000000000000000 0 00000000000000 10000 01245678999
Q ss_pred cEEEEeecCCCCCChhHHHHHHHhCC--CCcee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 245 KIAFLFGVDDHWGPQELYEEISEQVP--DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 245 P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
|+|+++|++|.++|++..+.+.+.++ +.+++ ++++||..++++|+...+.+.+.+.+||.+.+.
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999888764 67888 899999999999988888999999999998864
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.9e-32 Score=215.75 Aligned_cols=236 Identities=11% Similarity=0.107 Sum_probs=144.6
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
++|||+||++++...|.. +.+.|.++|+|+++|+||||.|+. ...++++++++++.+ + .. ++++|+|
T Consensus 14 ~~ivllHG~~~~~~~w~~----~~~~L~~~~~vi~~Dl~G~G~S~~--~~~~~~~~~~~~l~~----~--~~-~~~~lvG 80 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRC----IDEELSSHFTLHLVDLPGFGRSRG--FGALSLADMAEAVLQ----Q--AP-DKAIWLG 80 (256)
T ss_pred CeEEEECCCCCChhHHHH----HHHHHhcCCEEEEecCCCCCCCCC--CCCCCHHHHHHHHHh----c--CC-CCeEEEE
Confidence 469999999999999999 555666689999999999999973 235677777776553 3 23 4899999
Q ss_pred echHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHc-ccCC
Q 021479 118 HSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSN-SLGR 196 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 196 (312)
|||||.+|+.+|.++|++|+++|+++|............ ........+...+ ...... ....++.. ....
T Consensus 81 hS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~ 151 (256)
T PRK10349 81 WSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-----IKPDVLAGFQQQL---SDDFQR-TVERFLALQTMGT 151 (256)
T ss_pred ECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-----ccHHHHHHHHHHH---HhchHH-HHHHHHHHHHccC
Confidence 999999999999999999999999886322111100000 0000111111100 000001 11111110 0011
Q ss_pred CCchhHHHHHHhhccc--hhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCce
Q 021479 197 SWSATAVEAACTHLSQ--YHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPL 274 (312)
Q Consensus 197 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 274 (312)
................ .... ..... .+..+....-.+.+.++++|+++++|++|.++|.+..+.+.+.++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~ 227 (256)
T PRK10349 152 ETARQDARALKKTVLALPMPEV-DVLNG---GLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSES 227 (256)
T ss_pred chHHHHHHHHHHHhhccCCCcH-HHHHH---HHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeE
Confidence 1000111110000000 0000 00000 0111111112367889999999999999999999999999999999999
Q ss_pred e-ecCCCccccccccccchHHHHHHHHHHH
Q 021479 275 A-IERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 275 ~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
. ++++||++++++|+ ++++.+.+|-
T Consensus 228 ~~i~~~gH~~~~e~p~----~f~~~l~~~~ 253 (256)
T PRK10349 228 YIFAKAAHAPFISHPA----EFCHLLVALK 253 (256)
T ss_pred EEeCCCCCCccccCHH----HHHHHHHHHh
Confidence 9 99999999999987 6666666653
No 16
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=2.2e-32 Score=217.57 Aligned_cols=241 Identities=15% Similarity=0.195 Sum_probs=154.5
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
.++|+|||+||++++...|.. +.+.|.++|+|+++|+||||.|.......++++++++++.++++.+ +.. +++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~----~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~--~~~-~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAP----QLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL--NIE-RFH 83 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHH----HHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh--CCC-cEE
Confidence 347889999999999999988 4444555899999999999999755556789999999999999987 455 799
Q ss_pred EEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHccc
Q 021479 115 LVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSL 194 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (312)
++||||||.+++.+|.++|++|+++|++++........ .... .....+.. ................
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT------RRCF--DVRIALLQ------HAGPEAYVHAQALFLY 149 (257)
T ss_pred EEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH------HHHH--HHHHHHHh------ccCcchhhhhhhhhhc
Confidence 99999999999999999999999999988643211100 0000 00000000 0000000000000000
Q ss_pred CCCC----chhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCC
Q 021479 195 GRSW----SATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVP 270 (312)
Q Consensus 195 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 270 (312)
...+ ....................... .+..+........+.++++|+++++|++|.++|++..+.+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 225 (257)
T TIGR03611 150 PADWISENAARLAADEAHALAHFPGKANVLR----RINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP 225 (257)
T ss_pred cccHhhccchhhhhhhhhcccccCccHHHHH----HHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC
Confidence 0000 00000000000000000000000 011111111125677899999999999999999999999999999
Q ss_pred CCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 271 DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 271 ~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+++++ ++++||.+++++|+ ++.+.|.+||+
T Consensus 226 ~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~ 256 (257)
T TIGR03611 226 NAQLKLLPYGGHASNVTDPE----TFNRALLDFLK 256 (257)
T ss_pred CceEEEECCCCCCccccCHH----HHHHHHHHHhc
Confidence 99988 99999999998765 78888888875
No 17
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=211.53 Aligned_cols=275 Identities=14% Similarity=0.081 Sum_probs=172.6
Q ss_pred cccccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCC-CCc
Q 021479 11 NKSVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG-RLF 89 (312)
Q Consensus 11 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~-~~~ 89 (312)
......+++..+|+++++.+-+ .+.+|.|+++||++.++..|+..+..++.. +|+|+|+|+||+|.|+.+.. ..|
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g-~~~gP~illlHGfPe~wyswr~q~~~la~~---~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGG-PGDGPIVLLLHGFPESWYSWRHQIPGLASR---GYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred hhhcceeeEEEccEEEEEEeec-CCCCCEEEEEccCCccchhhhhhhhhhhhc---ceEEEecCCCCCCCCCCCCCccee
Confidence 3457788899999777776664 345789999999999999999977776666 79999999999999996655 689
Q ss_pred chHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccc---h-----h
Q 021479 90 SLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIG---R-----V 161 (312)
Q Consensus 90 ~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~---~-----~ 161 (312)
++...+.|+..+++++ + .++++++||+|||.+|+.+|..+|++|+++|.++-+.......+...... . .
T Consensus 95 t~~~l~~di~~lld~L--g-~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~ 171 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHL--G-LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICL 171 (322)
T ss_pred eHHHHHHHHHHHHHHh--c-cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEe
Confidence 9999999999999999 5 45899999999999999999999999999999872221000000000000 0 0
Q ss_pred hhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccC-----C-------CCc-hhHHHHHHhhccchhHHHHHHHHHHHHHh
Q 021479 162 AASNIASTALSYIIASLGILPSKALRFLVSNSLG-----R-------SWS-ATAVEAACTHLSQYHVMRNVLFMTMTEFK 228 (312)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (312)
.+.+..... .+.....+.....+..+... . .|. .+.+... ........+...... .+
T Consensus 172 fQ~~~~~E~-----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~-~~~f~~~g~~gplNy----yr 241 (322)
T KOG4178|consen 172 FQEPGKPET-----ELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFY-VSKFQIDGFTGPLNY----YR 241 (322)
T ss_pred ccccCcchh-----hhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHH-Hhccccccccccchh----hH
Confidence 000000000 00000000011000100000 0 000 1111111 111111111111111 22
Q ss_pred hhcCCCC--hhhhhhcCCcEEEEeecCCCCCChh-HHHHHHHhCCCC-cee-ecCCCccccccccccchHHHHHHHHHHH
Q 021479 229 QLKNTPD--WAFMRENQSKIAFLFGVDDHWGPQE-LYEEISEQVPDV-PLA-IERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 229 ~~~~~~~--~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~-~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
.+..... ...+.++++|+++++|++|.+.+.. ..+.+.+.+|.. +.+ ++++||+...|+|+ ++++.+.+||
T Consensus 242 n~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~----~v~~~i~~f~ 317 (322)
T KOG4178|consen 242 NFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQ----EVNQAILGFI 317 (322)
T ss_pred HHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHH----HHHHHHHHHH
Confidence 2221110 1245689999999999999998877 455566677876 344 89999999999887 7778888887
Q ss_pred Hhh
Q 021479 304 KNK 306 (312)
Q Consensus 304 ~~~ 306 (312)
++.
T Consensus 318 ~~~ 320 (322)
T KOG4178|consen 318 NSF 320 (322)
T ss_pred Hhh
Confidence 764
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=4.8e-32 Score=215.37 Aligned_cols=239 Identities=12% Similarity=0.148 Sum_probs=153.1
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
..+|+|||+||++++...|.. +...|.++|+|+++|+||||.|.. ...++++++++++.++++.+ ... +++
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~----~~~~l~~~~~vi~~D~~G~G~s~~--~~~~~~~~~~~d~~~~l~~l--~~~-~~~ 84 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGV----LARDLVNDHDIIQVDMRNHGLSPR--DPVMNYPAMAQDLLDTLDAL--QIE-KAT 84 (255)
T ss_pred CCCCCEEEECCCCCchhHHHH----HHHHHhhCCeEEEECCCCCCCCCC--CCCCCHHHHHHHHHHHHHHc--CCC-ceE
Confidence 457899999999999999988 555566689999999999999973 34579999999999999997 455 799
Q ss_pred EEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHccc
Q 021479 115 LVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSL 194 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (312)
|+||||||.+++.+|.++|++|+++|++++..... .. ... ......+.. ... ................+
T Consensus 85 lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~--~~-----~~~--~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 153 (255)
T PRK10673 85 FIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDY--HV-----RRH--DEIFAAINA-VSE-AGATTRQQAAAIMRQHL 153 (255)
T ss_pred EEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCc--cc-----hhh--HHHHHHHHH-hhh-cccccHHHHHHHHHHhc
Confidence 99999999999999999999999999986311100 00 000 000000000 000 00000000000111000
Q ss_pred CCCCchhHHHHHH-hhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc
Q 021479 195 GRSWSATAVEAAC-THLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP 273 (312)
Q Consensus 195 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 273 (312)
......... ........ ..........+..+ ..++.++++++|+++|+|++|..++++..+.+++.+|+++
T Consensus 154 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 225 (255)
T PRK10673 154 ----NEEGVIQFLLKSFVDGEW-RFNVPVLWDQYPHI---VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQAR 225 (255)
T ss_pred ----CCHHHHHHHHhcCCccee-EeeHHHHHHhHHHH---hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcE
Confidence 000000000 00000000 00000000001111 1234456789999999999999999999999999999999
Q ss_pred ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 274 LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 274 ~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
++ ++++||+.++++|+ ++.+.+.+||++
T Consensus 226 ~~~~~~~gH~~~~~~p~----~~~~~l~~fl~~ 254 (255)
T PRK10673 226 AHVIAGAGHWVHAEKPD----AVLRAIRRYLND 254 (255)
T ss_pred EEEeCCCCCeeeccCHH----HHHHHHHHHHhc
Confidence 88 99999999999866 788888888875
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.7e-31 Score=218.46 Aligned_cols=263 Identities=15% Similarity=0.150 Sum_probs=162.2
Q ss_pred eeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCC---CCcchHHHHH
Q 021479 20 NVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG---RLFSLDEQVE 96 (312)
Q Consensus 20 ~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~---~~~~~~~~~~ 96 (312)
..+++++.|.+.++. .+++|||+||++++...|+. +++.|.++|+|+++|+||||.|+.... ..++++++++
T Consensus 111 ~~~~~~~~y~~~G~~-~~~~ivllHG~~~~~~~w~~----~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~ 185 (383)
T PLN03084 111 SSDLFRWFCVESGSN-NNPPVLLIHGFPSQAYSYRK----VLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVS 185 (383)
T ss_pred cCCceEEEEEecCCC-CCCeEEEECCCCCCHHHHHH----HHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHH
Confidence 467788877776653 35789999999999999999 555566689999999999999974432 2589999999
Q ss_pred HHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHH
Q 021479 97 HKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIA 176 (312)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (312)
++.++++++ ... +++|+|||+||.+++.+|.++|++|+++|+++|......... .. ... .+...+. ..
T Consensus 186 ~l~~~i~~l--~~~-~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~-p~---~l~--~~~~~l~---~~ 253 (383)
T PLN03084 186 SLESLIDEL--KSD-KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKL-PS---TLS--EFSNFLL---GE 253 (383)
T ss_pred HHHHHHHHh--CCC-CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccc-hH---HHH--HHHHHHh---hh
Confidence 999999998 555 799999999999999999999999999999997532111000 00 000 0000000 00
Q ss_pred HhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHh-hhcCC-CCh-hh--hhhcCCcEEEEee
Q 021479 177 SLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFK-QLKNT-PDW-AF--MRENQSKIAFLFG 251 (312)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~~--l~~i~~P~lii~G 251 (312)
.....+.......+..........+........+................+. .+... .+. .. ..++++|+++++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G 333 (383)
T PLN03084 254 IFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWG 333 (383)
T ss_pred hhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEee
Confidence 0000000000000000000001111111111111111100000000000010 00000 000 01 1357999999999
Q ss_pred cCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 252 VDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 252 ~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
++|.+++.+..+.+++. ++.+++ ++++||+.++++|+ ++++.|.+||+
T Consensus 334 ~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe----~v~~~I~~Fl~ 382 (383)
T PLN03084 334 LRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGE----ELGGIISGILS 382 (383)
T ss_pred CCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHH----HHHHHHHHHhh
Confidence 99999999998888887 578888 99999999999877 77788888875
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=2.4e-32 Score=223.75 Aligned_cols=278 Identities=12% Similarity=0.082 Sum_probs=171.7
Q ss_pred cccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCC-----CC
Q 021479 13 SVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH-----GR 87 (312)
Q Consensus 13 ~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~-----~~ 87 (312)
..+.++...+|.++.+..+++..++++||++||++++...|..++..+.+. ||+|+++|+||||.|+... +.
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~---g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHL---GYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHC---CCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 456677888999999999887666789999999999998899966666555 9999999999999996321 12
Q ss_pred CcchHHHHHHHHHHHHHHhhc-CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhh
Q 021479 88 LFSLDEQVEHKMDFIRQELQN-TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNI 166 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 166 (312)
..+++++++++.++++..... ...+++++||||||.+++.+|.++|++++++|+++|......... . ..
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~-~---------~~ 176 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLP-S---------WM 176 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCC-c---------HH
Confidence 358999999999999875322 235899999999999999999999999999999998643211111 0 00
Q ss_pred hhHHHHHHHHHhcCCcH--H-HHHHHHHcccCC--CCchhHHHHHHhhccchhHHH---HHHHHHHHHHhhhcCCCChhh
Q 021479 167 ASTALSYIIASLGILPS--K-ALRFLVSNSLGR--SWSATAVEAACTHLSQYHVMR---NVLFMTMTEFKQLKNTPDWAF 238 (312)
Q Consensus 167 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (312)
...+............. . ...+........ ...+.......+.+...+... .........+.... .-...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 254 (330)
T PRK10749 177 ARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGE--QVLAG 254 (330)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHH--HHHhh
Confidence 00000000000000000 0 000000000000 000111111111111010000 00000000010000 00134
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHHHHHHhC-------CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYEEISEQV-------PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-------~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
+.++++|+|+++|++|.+++++..+.+++.+ ++++++ ++++||..++|.++ ..+.+.+.|.+||+++
T Consensus 255 ~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 255 AGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-MRSVALNAIVDFFNRH 329 (330)
T ss_pred ccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-HHHHHHHHHHHHHhhc
Confidence 5678999999999999999999988888765 345678 99999999998643 3567888999999764
No 21
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=4e-32 Score=216.07 Aligned_cols=251 Identities=13% Similarity=0.109 Sum_probs=149.9
Q ss_pred ccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHH
Q 021479 22 SIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDF 101 (312)
Q Consensus 22 ~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 101 (312)
+|.+..+++ +++.+|+|||+||++++...|.++...|.+. +|+|+++|+||||.|.......++++++++++.++
T Consensus 5 ~~~~~~~~~--~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~---g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 5 NGEEVTDMK--PNRQPPHFVLIHGISGGSWCWYKIRCLMENS---GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred ccccccccc--ccCCCCeEEEECCCCCCcCcHHHHHHHHHhC---CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHH
Confidence 455544444 5556788999999999999999955554443 89999999999998853333458999999999999
Q ss_pred HHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCC
Q 021479 102 IRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGIL 181 (312)
Q Consensus 102 i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
++.+ ...++++|+||||||.+++.++.++|++|+++|++++............ .....+.+..............
T Consensus 80 i~~l--~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PLN02211 80 LSSL--PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDED---MKDGVPDLSEFGDVYELGFGLG 154 (273)
T ss_pred HHhc--CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHH---HhccccchhhhccceeeeeccC
Confidence 9987 3335899999999999999999999999999999976432111000000 0000000000000000000000
Q ss_pred c-----HH-HHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhc-CCcEEEEeecC
Q 021479 182 P-----SK-ALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMREN-QSKIAFLFGVD 253 (312)
Q Consensus 182 ~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i-~~P~lii~G~~ 253 (312)
+ .. ....+...++....+.+...... ..... +....+.. .+. +....+ ++|+++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~-~~~~~~~~~~~~vP~l~I~g~~ 221 (273)
T PLN02211 155 PDQPPTSAIIKKEFRRKILYQMSPQEDSTLAA-MLLRP-----------GPILALRS-ARFEEETGDIDKVPRVYIKTLH 221 (273)
T ss_pred CCCCCceeeeCHHHHHHHHhcCCCHHHHHHHH-HhcCC-----------cCcccccc-ccccccccccCccceEEEEeCC
Confidence 0 00 00000000000000100000000 00000 00111111 111 223345 78999999999
Q ss_pred CCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHH
Q 021479 254 DHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVA 296 (312)
Q Consensus 254 D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~ 296 (312)
|..+|++.++.+.+.++..+++ ++ +||.+++++|+++.+.+.
T Consensus 222 D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 222 DHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred CCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHH
Confidence 9999999999999999988888 85 899999999884443333
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.8e-31 Score=210.29 Aligned_cols=245 Identities=12% Similarity=0.111 Sum_probs=158.0
Q ss_pred eeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHh
Q 021479 27 EVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQEL 106 (312)
Q Consensus 27 ~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~ 106 (312)
+|...++++.+|+|||+||++++...|.+ +++.|.++|+|+++|+||||.|+ .....+++++.++++.++++.+
T Consensus 3 ~~~~~g~~~~~~~li~~hg~~~~~~~~~~----~~~~l~~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~- 76 (251)
T TIGR02427 3 HYRLDGAADGAPVLVFINSLGTDLRMWDP----VLPALTPDFRVLRYDKRGHGLSD-APEGPYSIEDLADDVLALLDHL- 76 (251)
T ss_pred eEEeecCCCCCCeEEEEcCcccchhhHHH----HHHHhhcccEEEEecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-
Confidence 45555555467899999999999999998 55556668999999999999997 4445679999999999999987
Q ss_pred hcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHH
Q 021479 107 QNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKAL 186 (312)
Q Consensus 107 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (312)
... +++++||||||.+++.+|.++|++|+++|+++|......... .... ...+.. .......
T Consensus 77 -~~~-~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~---~~~~------~~~~~~-------~~~~~~~ 138 (251)
T TIGR02427 77 -GIE-RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES---WNAR------IAAVRA-------EGLAALA 138 (251)
T ss_pred -CCC-ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh---HHHH------Hhhhhh-------ccHHHHH
Confidence 444 799999999999999999999999999998875432111000 0000 000000 0000000
Q ss_pred HHHHHcccCCC---CchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHH
Q 021479 187 RFLVSNSLGRS---WSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYE 263 (312)
Q Consensus 187 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 263 (312)
......++... ................. ... . ......+......+.+.++++|+++++|++|.++|.+..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~ 213 (251)
T TIGR02427 139 DAVLERWFTPGFREAHPARLDLYRNMLVRQP-PDG-Y---AGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVR 213 (251)
T ss_pred HHHHHHHcccccccCChHHHHHHHHHHHhcC-HHH-H---HHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHH
Confidence 00000101000 00111111100000000 000 0 0001112211113567889999999999999999999999
Q ss_pred HHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 264 EISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 264 ~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
.+.+.+++.+++ ++++||..+++.|+ ++.+.+.+|++
T Consensus 214 ~~~~~~~~~~~~~~~~~gH~~~~~~p~----~~~~~i~~fl~ 251 (251)
T TIGR02427 214 EIADLVPGARFAEIRGAGHIPCVEQPE----AFNAALRDFLR 251 (251)
T ss_pred HHHHhCCCceEEEECCCCCcccccChH----HHHHHHHHHhC
Confidence 999999998888 99999999999776 77778877763
No 23
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-31 Score=217.89 Aligned_cols=267 Identities=12% Similarity=0.093 Sum_probs=156.5
Q ss_pred eccccceeeeecCCC------CceEEEEEcCCCCchhcHH--HHHHHHH----HHcCCCccEEEeccCCCccCccCCC--
Q 021479 21 VSIYTAEVLEIEADD------PKLHVLFVPGNPGVITFYK--DFVQSLY----EHLGGNASISAIGSAAQTKKNYDHG-- 86 (312)
Q Consensus 21 ~~g~~~~~~~~~~~~------~~~~iv~~HG~~~~~~~~~--~~~~~l~----~~l~~~~~vi~~D~~G~G~s~~~~~-- 86 (312)
.+|.++.|...++.. .+|+|||+||++++...|. .+...+. ..+.++|+||++|+||||.|+....
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 567777777776432 1578999999999987775 4333321 1225689999999999999974322
Q ss_pred ----CCcchHHHHHHHHHHH-HHHhhcCCCcEE-EEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccch
Q 021479 87 ----RLFSLDEQVEHKMDFI-RQELQNTEVPIV-LVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGR 160 (312)
Q Consensus 87 ----~~~~~~~~~~~~~~~i-~~~~~~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 160 (312)
..++++++++++.+++ +++ ++. +++ |+||||||.+|+.+|.++|++|+++|++++....... .. .
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~l--gi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~---~~---~ 197 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGL--GVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG---RN---W 197 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhc--CCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH---HH---H
Confidence 1478999999988866 556 455 675 8999999999999999999999999998753211000 00 0
Q ss_pred hhhhhhhhHHHHHHHHHhc-------CCcHHHHHHH--HHc--------ccCCCCchhHHHHHHhhccchhHHHHHHHHH
Q 021479 161 VAASNIASTALSYIIASLG-------ILPSKALRFL--VSN--------SLGRSWSATAVEAACTHLSQYHVMRNVLFMT 223 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (312)
... ............ ..+....... ... +............................+
T Consensus 198 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (360)
T PRK06489 198 MWR----RMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDF- 272 (360)
T ss_pred HHH----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHH-
Confidence 000 000000000000 0000000000 000 000000000000000000000000000000
Q ss_pred HHHHhhhcCCCC-hhhhhhcCCcEEEEeecCCCCCChhHH--HHHHHhCCCCcee-ecCC----CccccccccccchHHH
Q 021479 224 MTEFKQLKNTPD-WAFMRENQSKIAFLFGVDDHWGPQELY--EEISEQVPDVPLA-IERH----GHTHNFCCSEAGSAWV 295 (312)
Q Consensus 224 ~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~--~~~~~~~~~~~~~-i~~~----gH~~~~~~~~~~~~~v 295 (312)
...+..... .+ .+.+.+|++|+|+|+|++|.++|++.. +.+++.+|+++++ ++++ ||.++ ++|+ ++
T Consensus 273 ~~~~~~~~~-~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~----~~ 346 (360)
T PRK06489 273 LYQWDSSRD-YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAK----FW 346 (360)
T ss_pred HHHHHHhhc-cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHH----HH
Confidence 000111111 23 367889999999999999999999875 7899999999999 9885 99986 7665 78
Q ss_pred HHHHHHHHHhhc
Q 021479 296 ASHVAGLIKNKI 307 (312)
Q Consensus 296 ~~~v~~~l~~~~ 307 (312)
++.|.+||++.-
T Consensus 347 ~~~i~~FL~~~~ 358 (360)
T PRK06489 347 KAYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHHhcc
Confidence 888888887653
No 24
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-31 Score=202.77 Aligned_cols=266 Identities=15% Similarity=0.148 Sum_probs=179.5
Q ss_pred eeeeccccceeeeecC---CCCceEEEEEcCCCCch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHH
Q 021479 18 LSNVSIYTAEVLEIEA---DDPKLHVLFVPGNPGVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDE 93 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~---~~~~~~iv~~HG~~~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (312)
+.+..|..+.+..|.+ .+++..|+++||+++.. ..|..++..++.. ||.|+++|++|||.|++......+++.
T Consensus 32 ~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~---g~~v~a~D~~GhG~SdGl~~yi~~~d~ 108 (313)
T KOG1455|consen 32 FTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKS---GFAVYAIDYEGHGRSDGLHAYVPSFDL 108 (313)
T ss_pred EEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhC---CCeEEEeeccCCCcCCCCcccCCcHHH
Confidence 4445666666666766 35688999999999876 6788877777766 999999999999999977888889999
Q ss_pred HHHHHHHHHHHHh---hcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHH
Q 021479 94 QVEHKMDFIRQEL---QNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTA 170 (312)
Q Consensus 94 ~~~~~~~~i~~~~---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (312)
.++|+.++.+... ...+.+.+|+||||||.|++.++.++|+..+|+|+++|+......... .+....+
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp---------~p~v~~~ 179 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP---------HPPVISI 179 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC---------CcHHHHH
Confidence 9999999988632 234568999999999999999999999999999999997654433221 2223333
Q ss_pred HHHHHHHhcCCcHHHHHHHHHcccCCCC-chhHHHHHHhh---ccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCc
Q 021479 171 LSYIIASLGILPSKALRFLVSNSLGRSW-SATAVEAACTH---LSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSK 245 (312)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P 245 (312)
+..+.. ++|.+..- -.+....... ++......... +...+.++....+ ++...+. ..+.++++|
T Consensus 180 l~~l~~---liP~wk~v-p~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~El-------Lr~~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 180 LTLLSK---LIPTWKIV-PTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYEL-------LRVTADLEKNLNEVTVP 248 (313)
T ss_pred HHHHHH---hCCceeec-CCccccccccCCHHHHHHhhcCCceecCCccHHHHHHH-------HHHHHHHHHhccccccc
Confidence 332222 22322210 0000000000 11111111111 1111112222221 2211232 567899999
Q ss_pred EEEEeecCCCCCChhHHHHHHHhCCCC--cee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 246 IAFLFGVDDHWGPQELYEEISEQVPDV--PLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 246 ~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
.+++||+.|.+++++.++.+.+..+.. ++. .|+.=|....-.+++..+.|...|.+||+++
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999987654 466 7777777666456788889999999999876
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.98 E-value=2e-30 Score=204.64 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=145.0
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
+++|||+||++++...|.. +.+.|.++|+|+++|+||||.|+. ...+++++.++++.+ . ..++++++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~----~~~~l~~~~~vi~~d~~G~G~s~~--~~~~~~~~~~~~~~~----~---~~~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRC----LDEELSAHFTLHLVDLPGHGRSRG--FGPLSLADAAEAIAA----Q---APDPAIWL 70 (245)
T ss_pred CceEEEEcCCCCchhhHHH----HHHhhccCeEEEEecCCcCccCCC--CCCcCHHHHHHHHHH----h---CCCCeEEE
Confidence 3789999999999999998 666676689999999999999863 234567776666544 2 23489999
Q ss_pred eechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCC
Q 021479 117 GHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGR 196 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (312)
||||||.+++.+|.++|++++++|++++........... ... .......+...... ........+.....+..
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 143 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP---EGI-KPDVLTGFQQQLSD---DYQRTIERFLALQTLGT 143 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCccc---ccC-CHHHHHHHHHHhhh---hHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987543211110000 000 00001111000000 00000001100000111
Q ss_pred CCchhHHHHHHhh---ccchhHHHHHHHHHHHHHhhhcCCCC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCC
Q 021479 197 SWSATAVEAACTH---LSQYHVMRNVLFMTMTEFKQLKNTPD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDV 272 (312)
Q Consensus 197 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 272 (312)
............. ..... ... . ...+..+.. .+ ...+.++++|+++++|++|.++|++..+.+.+.+|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~ 217 (245)
T TIGR01738 144 PTARQDARALKQTLLARPTPN-VQV-L---QAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS 217 (245)
T ss_pred CccchHHHHHHHHhhccCCCC-HHH-H---HHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC
Confidence 1111111111000 00000 000 0 000111221 22 2567899999999999999999999999999999999
Q ss_pred cee-ecCCCccccccccccchHHHHHHHHHHH
Q 021479 273 PLA-IERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 273 ~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
++. ++++||+.++++|+ ++++.|.+||
T Consensus 218 ~~~~~~~~gH~~~~e~p~----~~~~~i~~fi 245 (245)
T TIGR01738 218 ELYIFAKAAHAPFLSHAE----AFCALLVAFK 245 (245)
T ss_pred eEEEeCCCCCCccccCHH----HHHHHHHhhC
Confidence 999 99999999999876 7777777775
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=3.9e-30 Score=202.76 Aligned_cols=236 Identities=16% Similarity=0.073 Sum_probs=141.2
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
+|+|||+||++++...|.. +.+.|+ +|+|+++|+||||.|+.. ...+++++++++.++++++ ... +++++
T Consensus 2 ~p~vvllHG~~~~~~~w~~----~~~~l~-~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~l~~~l~~~--~~~-~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQP----VGEALP-DYPRLYIDLPGHGGSAAI--SVDGFADVSRLLSQTLQSY--NIL-PYWLV 71 (242)
T ss_pred CCEEEEECCCCCChHHHHH----HHHHcC-CCCEEEecCCCCCCCCCc--cccCHHHHHHHHHHHHHHc--CCC-CeEEE
Confidence 4679999999999999999 555564 799999999999999732 2358999999999999997 454 89999
Q ss_pred eechHHHHHHHHHHhcccc-ceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhc-CCcHHHHHHHHHccc
Q 021479 117 GHSIGAYVALEMLKRSSEK-VIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLG-ILPSKALRFLVSNSL 194 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (312)
||||||.+|+.+|.++|+. |++++++++...... .. ...........+. ..+.. ........++....+
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~---~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 142 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQN---AE---ERQARWQNDRQWA---QRFRQEPLEQVLADWYQQPVF 142 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCC---HH---HHHHHHhhhHHHH---HHhccCcHHHHHHHHHhcchh
Confidence 9999999999999999764 999998875322110 00 0000000000000 00000 000111111101101
Q ss_pred CCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc
Q 021479 195 GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP 273 (312)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 273 (312)
. .................... ....+.. .. ......+. +.+.++++|+++++|++|..+. .+++. .+++
T Consensus 143 ~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~ 212 (242)
T PRK11126 143 A-SLNAEQRQQLVAKRSNNNGA-AVAAMLE-AT-SLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALP 212 (242)
T ss_pred h-ccCccHHHHHHHhcccCCHH-HHHHHHH-hc-CcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCe
Confidence 1 11111111111111100000 0000000 00 01122333 6788999999999999998542 23333 3788
Q ss_pred ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 274 LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 274 ~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
++ ++++||+.++++|+ ++++.|.+|+++
T Consensus 213 ~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 241 (242)
T PRK11126 213 LHVIPNAGHNAHRENPA----AFAASLAQILRL 241 (242)
T ss_pred EEEeCCCCCchhhhChH----HHHHHHHHHHhh
Confidence 88 99999999999887 777788888764
No 27
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=3e-30 Score=205.90 Aligned_cols=282 Identities=18% Similarity=0.145 Sum_probs=183.7
Q ss_pred ccccccceeeeeccccceeeeecCCCC-ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCc-cCCCC
Q 021479 10 SNKSVNLRLSNVSIYTAEVLEIEADDP-KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKN-YDHGR 87 (312)
Q Consensus 10 ~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~-~~~~~ 87 (312)
+....+..+...++..+.+..|....+ +.+||++||.+.+...|..++..+... ||.|+++|+||||.|. ...+.
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~---G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAAR---GFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhC---CCEEEEecCCCCCCCCCCCcCC
Confidence 445566778888999999999988755 489999999999999999977776666 9999999999999997 56777
Q ss_pred CcchHHHHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhh
Q 021479 88 LFSLDEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNI 166 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 166 (312)
..+++++++|+.++++.... ....+++|+||||||.|++.++.+++.+|+++||.+|++.... . ......
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-~--------~~~~~~ 153 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-A--------ILRLIL 153 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-h--------HHHHHH
Confidence 77899999999999998632 2456999999999999999999999999999999999876443 0 000011
Q ss_pred hhHHHHHHHHHhcCCcHHHHHHHHHcccCC--CCchhHHHHHHhhcc-chhHHHHHHHHHHHHHhhhcCCCChhhhhhcC
Q 021479 167 ASTALSYIIASLGILPSKALRFLVSNSLGR--SWSATAVEAACTHLS-QYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQ 243 (312)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (312)
..............++... . ........ .-++.........-. ....... ......+.... .........++
T Consensus 154 ~~~~~~~~~~~~p~~~~~~-~-~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~--~w~~~~~~a~~-~~~~~~~~~~~ 228 (298)
T COG2267 154 ARLALKLLGRIRPKLPVDS-N-LLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVS--RWVDLALLAGR-VPALRDAPAIA 228 (298)
T ss_pred HHHhcccccccccccccCc-c-cccCcCcchhhcCHHHHHHHhcCCccccCCccH--HHHHHHHHhhc-ccchhcccccc
Confidence 1111000000000000000 0 00000000 001111111111110 0000000 00000011111 12334456889
Q ss_pred CcEEEEeecCCCCCC-hhHHHHHHHhC--CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhccC
Q 021479 244 SKIAFLFGVDDHWGP-QELYEEISEQV--PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIPS 309 (312)
Q Consensus 244 ~P~lii~G~~D~~~~-~~~~~~~~~~~--~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~~ 309 (312)
+|+|+++|++|.+++ .+....+.+.. +++++. ++++.|....|. +...+++.+.+.+|+.+..+.
T Consensus 229 ~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~-~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 229 LPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP-DRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred CCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc-chHHHHHHHHHHHHHHhhccC
Confidence 999999999999999 67777766654 556677 999999999886 433389999999999987653
No 28
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=6.3e-30 Score=213.57 Aligned_cols=271 Identities=14% Similarity=0.132 Sum_probs=149.2
Q ss_pred cceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchH----HHHHHHHH
Q 021479 25 TAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLD----EQVEHKMD 100 (312)
Q Consensus 25 ~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~----~~~~~~~~ 100 (312)
.+.+..+...+++|+|||+||++++...|...+ +.|.++|+|+++|+||||.|+.......+.+ ..++++.+
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~----~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNF----DALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHH----HHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 444555555556789999999999988888744 4454579999999999999973322112222 24566667
Q ss_pred HHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcC
Q 021479 101 FIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGI 180 (312)
Q Consensus 101 ~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (312)
+++.+ +.. +++|+||||||.+++.+|.++|++|+++|+++|............+..... ..+...+...+. ....
T Consensus 169 ~~~~l--~~~-~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~ 243 (402)
T PLN02894 169 WRKAK--NLS-NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFR-ATWKGAVLNHLW-ESNF 243 (402)
T ss_pred HHHHc--CCC-CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcc-hhHHHHHHHHHh-hcCC
Confidence 77766 455 899999999999999999999999999999987432211111000000000 000000000000 0001
Q ss_pred CcHHH-----------HHHHHHcccCC-----CCchhH---HHHHHh-hccchhHHHHHHHHHHHHHhhhcCCCChhhhh
Q 021479 181 LPSKA-----------LRFLVSNSLGR-----SWSATA---VEAACT-HLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMR 240 (312)
Q Consensus 181 ~~~~~-----------~~~~~~~~~~~-----~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (312)
.|... ........+.. ....+. +..... ................ ........+....+.
T Consensus 244 ~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 322 (402)
T PLN02894 244 TPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIF-SFGAFARKPLLESAS 322 (402)
T ss_pred CHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhc-cCchhhcchHhhhcc
Confidence 11111 10001000000 000001 101100 0000000000011000 000111111124577
Q ss_pred hcCCcEEEEeecCCCCCChhHHHHHHHhC-CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 241 ENQSKIAFLFGVDDHWGPQELYEEISEQV-PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 241 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
++++|+++|+|++|.+.+ .....+.+.. +.++++ ++++||+.++++|+.+.+.+.+++.+|++..
T Consensus 323 ~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred cCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 899999999999998766 4444555544 357788 9999999999999877777777776666553
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.4e-30 Score=198.19 Aligned_cols=259 Identities=16% Similarity=0.153 Sum_probs=147.4
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCC---CcchHHHHHHHHHHHHHHhhcCCC
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGR---LFSLDEQVEHKMDFIRQELQNTEV 111 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~ 111 (312)
..+.++||+||++.....|-. -.+.|++.++|+++|++|+|+|+.+.-. .......++.+.++-... ++.
T Consensus 88 ~~~~plVliHGyGAg~g~f~~----Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~--~L~- 160 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFR----NFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM--GLE- 160 (365)
T ss_pred cCCCcEEEEeccchhHHHHHH----hhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc--CCc-
Confidence 557889999999999999888 6666777899999999999999743222 223446777777777776 666
Q ss_pred cEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhh-hhhHHHH-----HHHHHhcCCcHHH
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASN-IASTALS-----YIIASLGILPSKA 185 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~ 185 (312)
+.+|+|||+||++|..||.+||++|+.|||++|..-................+. ....... ...+..+.+-.++
T Consensus 161 KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~L 240 (365)
T KOG4409|consen 161 KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKL 240 (365)
T ss_pred ceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHH
Confidence 899999999999999999999999999999998544332211111001000000 0000000 0011111111112
Q ss_pred H-HHHHHccc--CCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcC--CcEEEEeecCCCCCChh
Q 021479 186 L-RFLVSNSL--GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQ--SKIAFLFGVDDHWGPQE 260 (312)
Q Consensus 186 ~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~ 260 (312)
. ++..+.+. .....++.+....-.....+...........+......++-.+.+..++ ||+++|+|++|- ++..
T Consensus 241 v~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~ 319 (365)
T KOG4409|consen 241 VSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKN 319 (365)
T ss_pred HhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccc-ccch
Confidence 1 11111111 1111222222222222111111111111110011111111123444455 999999999994 5555
Q ss_pred HHHHHHHh--CCCCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 261 LYEEISEQ--VPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 261 ~~~~~~~~--~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
....+.+. ...++.. |+++||+...++|+ .+++.|.+++++
T Consensus 320 ~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~----~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 320 AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPE----FFNQIVLEECDK 363 (365)
T ss_pred hHHHHHHHhhcccceEEEecCCCceeecCCHH----HHHHHHHHHHhc
Confidence 55555553 2346777 99999999999988 566666666654
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=2.4e-29 Score=203.39 Aligned_cols=266 Identities=16% Similarity=0.119 Sum_probs=155.0
Q ss_pred eeeeccccceeeeecCCCCceEEEEEcCCCCchhc-HHHHHHHHHHHcCC-CccEEEeccCCCccCccCCCC--CcchHH
Q 021479 18 LSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITF-YKDFVQSLYEHLGG-NASISAIGSAAQTKKNYDHGR--LFSLDE 93 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~-~~~~~~~l~~~l~~-~~~vi~~D~~G~G~s~~~~~~--~~~~~~ 93 (312)
+++.++....|...+..+.+++|||+||++++... |.. +.+.+.+ +|+|+++|+||||.|...... .+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~----~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 81 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLEN----LRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDY 81 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHH----HHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHH
Confidence 56677777766666655556789999998766544 455 3333333 799999999999999743333 378999
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHH
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSY 173 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (312)
+++++.++++++ ... +++++||||||.+++.+|.++|++|+++|+++|........ . ...... ..........
T Consensus 82 ~~~~~~~~~~~~--~~~-~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~ 154 (288)
T TIGR01250 82 FVDELEEVREKL--GLD-KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV--K-ELNRLR-KELPPEVRAA 154 (288)
T ss_pred HHHHHHHHHHHc--CCC-cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHH--H-HHHHHH-hhcChhHHHH
Confidence 999999999987 444 69999999999999999999999999999988643211000 0 000000 0000000000
Q ss_pred HHHHh--c-CCcHHHHHHHHHccc-----CCCCchhHHHHHHhhccchhHHHHHHHHHHHHH---hhhcCCCC-hhhhhh
Q 021479 174 IIASL--G-ILPSKALRFLVSNSL-----GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEF---KQLKNTPD-WAFMRE 241 (312)
Q Consensus 174 ~~~~~--~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~l~~ 241 (312)
..... . ........ ....+. ............... ...... .... ....+ ..+. ..+ .+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~l~~ 229 (288)
T TIGR01250 155 IKRCEASGDYDNPEYQE-AVEVFYHHLLCRTRKWPEALKHLKSG-MNTNVY-NIMQ-GPNEFTITGNLK-DWDITDKLSE 229 (288)
T ss_pred HHHHHhccCcchHHHHH-HHHHHHHHhhcccccchHHHHHHhhc-cCHHHH-hccc-CCcccccccccc-ccCHHHHhhc
Confidence 00000 0 00000000 000000 000000000000000 000000 0000 00000 0001 112 256778
Q ss_pred cCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 242 NQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 242 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+++|+++++|++|.+ +++..+.+++.+++.+++ ++++||+.++++|+ ++.+.|.+||+
T Consensus 230 i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~ 288 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPE----VYFKLLSDFIR 288 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHH----HHHHHHHHHhC
Confidence 999999999999985 567788889989999988 99999999999876 77777777763
No 31
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.7e-30 Score=202.67 Aligned_cols=222 Identities=18% Similarity=0.241 Sum_probs=144.3
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCC-CCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG-RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
|||+||++++...|..++..+ .++|+|+++|+||||.|+.... ..++++++++++.++++++ .. ++++++||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l----~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL----ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL--GI-KKVILVGH 73 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH----HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT--TT-SSEEEEEE
T ss_pred eEEECCCCCCHHHHHHHHHHH----hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc--cc-cccccccc
Confidence 799999999999999955554 3599999999999999984433 4688999999999999998 44 48999999
Q ss_pred chHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCC
Q 021479 119 SIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSW 198 (312)
Q Consensus 119 S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (312)
|+||.+++.++.++|++|+++|+++|......... .......+..+........ .......+....
T Consensus 74 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---- 139 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS------RSFGPSFIRRLLAWRSRSL----RRLASRFFYRWF---- 139 (228)
T ss_dssp THHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC------HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH----
T ss_pred ccccccccccccccccccccceeeccccccccccc------ccccchhhhhhhhcccccc----cccccccccccc----
Confidence 99999999999999999999999997543111000 0000111111111000000 000000000000
Q ss_pred chhHHHHHHhhccchhHHHHHHHHHHHHHhh-hcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-e
Q 021479 199 SATAVEAACTHLSQYHVMRNVLFMTMTEFKQ-LKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-I 276 (312)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i 276 (312)
........... . ....... +.. .........++++++|+++++|++|.+++.+..+.+.+..+++++. +
T Consensus 140 ~~~~~~~~~~~--~---~~~~~~~----~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 210 (228)
T PF12697_consen 140 DGDEPEDLIRS--S---RRALAEY----LRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVI 210 (228)
T ss_dssp THHHHHHHHHH--H---HHHHHHH----HHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEE
T ss_pred ccccccccccc--c---ccccccc----cccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 00111111000 0 0000000 000 0000112567788999999999999999999999999999999999 9
Q ss_pred cCCCccccccccccc
Q 021479 277 ERHGHTHNFCCSEAG 291 (312)
Q Consensus 277 ~~~gH~~~~~~~~~~ 291 (312)
+++||+.++++|+++
T Consensus 211 ~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 211 PGAGHFLFLEQPDEV 225 (228)
T ss_dssp TTSSSTHHHHSHHHH
T ss_pred CCCCCccHHHCHHHH
Confidence 999999999988743
No 32
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=209.61 Aligned_cols=251 Identities=21% Similarity=0.196 Sum_probs=156.0
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCC--ccEEEeccCCCcc-CccCCCCCcchHHHHHHHHHHHHHHhhcCCCc
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGN--ASISAIGSAAQTK-KNYDHGRLFSLDEQVEHKMDFIRQELQNTEVP 112 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~--~~vi~~D~~G~G~-s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 112 (312)
++++||++|||+++...|+. +...|.+. ++|+++|++|+|. |..+.+..|+..++++.+..++.+. ...+
T Consensus 57 ~~~pvlllHGF~~~~~~w~~----~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~---~~~~ 129 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRR----VVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV---FVEP 129 (326)
T ss_pred CCCcEEEeccccCCcccHhh----hccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh---cCcc
Confidence 68899999999999999999 55556554 9999999999994 4445555799999999999999997 3347
Q ss_pred EEEEeechHHHHHHHHHHhccccceEEE---EecccccccCCCCcccccchhhhhhhhhHHHHHHHHHh---cCCcHH-H
Q 021479 113 IVLVGHSIGAYVALEMLKRSSEKVIYYI---GLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASL---GILPSK-A 185 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lv---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~ 185 (312)
++++|||+||.+|+.+|+.+|+.|+++| +++|........... ................ ...+.. .
T Consensus 130 ~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~~~~~ 202 (326)
T KOG1454|consen 130 VSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKG-------LRRLLDKFLSALELLIPLSLTEPVRLV 202 (326)
T ss_pred eEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhH-------HHHhhhhhccHhhhcCccccccchhhe
Confidence 9999999999999999999999999999 555433221111100 0000000000000000 000000 1
Q ss_pred HHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHH----hhhcC--CCChhhhhhcC-CcEEEEeecCCCCCC
Q 021479 186 LRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEF----KQLKN--TPDWAFMRENQ-SKIAFLFGVDDHWGP 258 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~l~~i~-~P~lii~G~~D~~~~ 258 (312)
...+.........+..............+. ......+.. ..+.. ......++++. ||+++++|+.|.++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p 279 (326)
T KOG1454|consen 203 SEGLLRCLKVVYTDPSRLLEKLLHLLSRPV---KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVP 279 (326)
T ss_pred eHhhhcceeeeccccccchhhhhhheeccc---ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccC
Confidence 111111100000010011110001110000 000000000 01111 11124556777 999999999999999
Q ss_pred hhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 259 QELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 259 ~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
.+.+..+.+.+|+++++ |+++||.++++.|+ ++++.|..|++...
T Consensus 280 ~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe----~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 280 LELAEELKKKLPNAELVEIPGAGHLPHLERPE----EVAALLRSFIARLR 325 (326)
T ss_pred HHHHHHHHhhCCCceEEEeCCCCcccccCCHH----HHHHHHHHHHHHhc
Confidence 99999999999999999 99999999999877 88888888887643
No 33
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1e-30 Score=215.53 Aligned_cols=270 Identities=12% Similarity=0.052 Sum_probs=157.4
Q ss_pred ccceeeeeccccceeeeecCCCCceEEEEEcCCCCchh------------cHHHHHHHHHH---Hc-CCCccEEEeccCC
Q 021479 14 VNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVIT------------FYKDFVQSLYE---HL-GGNASISAIGSAA 77 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~------------~~~~~~~~l~~---~l-~~~~~vi~~D~~G 77 (312)
...++...+|.++.|...++. ++++||+||+.++.. .|.. +.+ .| .++|+||++|+||
T Consensus 36 ~~~~~~~~~~~~l~y~~~G~~--~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~----~v~~~~~L~~~~~~Vi~~Dl~G 109 (343)
T PRK08775 36 LSMRHAGLEDLRLRYELIGPA--GAPVVFVAGGISAHRHVAATATFPEKGWWEG----LVGSGRALDPARFRLLAFDFIG 109 (343)
T ss_pred eeecCCCCCCceEEEEEeccC--CCCEEEEecCCCcccccccccCCCCCCcchh----ccCCCCccCccccEEEEEeCCC
Confidence 445555667788777776642 223677766666555 6777 554 35 4589999999999
Q ss_pred CccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccc
Q 021479 78 QTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSI 157 (312)
Q Consensus 78 ~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 157 (312)
||.|. . ..++++++++++.++++++ +.++.++|+||||||.+|+.+|.++|++|+++|++++..... .....
T Consensus 110 ~g~s~-~--~~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~---~~~~~ 181 (343)
T PRK08775 110 ADGSL-D--VPIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH---PYAAA 181 (343)
T ss_pred CCCCC-C--CCCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC---HHHHH
Confidence 99884 2 3568899999999999998 666446899999999999999999999999999998642211 00000
Q ss_pred cchhhhhhh---------hh--HHHHHHHHHhcCCcHHHHHHHHHccc-CCCCchhHHHHHHh----hccchhHHHHHHH
Q 021479 158 IGRVAASNI---------AS--TALSYIIASLGILPSKALRFLVSNSL-GRSWSATAVEAACT----HLSQYHVMRNVLF 221 (312)
Q Consensus 158 ~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 221 (312)
.....+... .. .............+......+..... .............. .............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 261 (343)
T PRK08775 182 WRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLR 261 (343)
T ss_pred HHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHH
Confidence 000000000 00 00000000000000111100000000 00000000000000 0000000000000
Q ss_pred HHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhC-CCCcee-ecC-CCccccccccccchHHHHHH
Q 021479 222 MTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQV-PDVPLA-IER-HGHTHNFCCSEAGSAWVASH 298 (312)
Q Consensus 222 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~-i~~-~gH~~~~~~~~~~~~~v~~~ 298 (312)
+ ...+.. ....+.++++|+|+++|++|.++|++..+.+.+.+ |+++++ +++ +||..++|+|+ +|++.
T Consensus 262 ~----~~~~~~--~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe----~~~~~ 331 (343)
T PRK08775 262 L----SESIDL--HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETD----RIDAI 331 (343)
T ss_pred H----HHHHhh--cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHH----HHHHH
Confidence 0 001110 01236789999999999999999999888888877 689988 874 99999999877 88888
Q ss_pred HHHHHHhhc
Q 021479 299 VAGLIKNKI 307 (312)
Q Consensus 299 v~~~l~~~~ 307 (312)
|.+||++.-
T Consensus 332 l~~FL~~~~ 340 (343)
T PRK08775 332 LTTALRSTG 340 (343)
T ss_pred HHHHHHhcc
Confidence 888887653
No 34
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=1.4e-29 Score=208.79 Aligned_cols=276 Identities=13% Similarity=0.020 Sum_probs=150.3
Q ss_pred eccccceeeeecCC--CCceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCCCccCccCCC--CCcchHH--
Q 021479 21 VSIYTAEVLEIEAD--DPKLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAAQTKKNYDHG--RLFSLDE-- 93 (312)
Q Consensus 21 ~~g~~~~~~~~~~~--~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G~G~s~~~~~--~~~~~~~-- 93 (312)
++|.+++|...++. +..++||++||++++...|..++. ..+.|. ++|+||++|+||||.|+.... ..+++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~-~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIG-PGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhcc-CCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 35667777777753 234667777888877666654110 002343 479999999999999973322 1344432
Q ss_pred ---HHHHHHH----HHHHHhhcCCCc-EEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCc-----------
Q 021479 94 ---QVEHKMD----FIRQELQNTEVP-IVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVT----------- 154 (312)
Q Consensus 94 ---~~~~~~~----~i~~~~~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~----------- 154 (312)
.++++.. +++++ ++. + ++||||||||++|+.+|.++|++|+++|++++..........
T Consensus 102 ~~~~~~~~~~~~~~l~~~l--gi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF--GIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh--CCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 3444443 44566 565 6 589999999999999999999999999998743211000000
Q ss_pred -ccccc-hhhh--hhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhc---cchhHHHHHHHHHHHHH
Q 021479 155 -QSIIG-RVAA--SNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHL---SQYHVMRNVLFMTMTEF 227 (312)
Q Consensus 155 -~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 227 (312)
..+.. .... ...+......... ....+..+.....+. .........+....... ............ ....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 255 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAG-WGFSQAFYRQELWRA-MGYASLEDFLVGFWEGNFLPRDPNNLLAMLWT-WQRG 255 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHH-HHhHHHHHHhhhccc-cChhhHHHHHHHHHHHhhcccCcccHHHHHHH-hhhc
Confidence 00000 0000 0000000000000 000000000000000 00000011111111111 011111110000 0000
Q ss_pred hhhcC---CCC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecC-CCccccccccccchHHHHHHHHH
Q 021479 228 KQLKN---TPD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IER-HGHTHNFCCSEAGSAWVASHVAG 301 (312)
Q Consensus 228 ~~~~~---~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~-~gH~~~~~~~~~~~~~v~~~v~~ 301 (312)
..... ..+ .+.++++++|+|+|+|++|.++|++..+.+++.+|+++++ +++ +||..++++|+ .+...|.+
T Consensus 256 ~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~----~~~~~~~~ 331 (339)
T PRK07581 256 DISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNP----ADIAFIDA 331 (339)
T ss_pred ccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcH----HHHHHHHH
Confidence 00111 013 3678899999999999999999999999999999999998 998 89999999987 66667777
Q ss_pred HHHhhc
Q 021479 302 LIKNKI 307 (312)
Q Consensus 302 ~l~~~~ 307 (312)
||++.+
T Consensus 332 ~~~~~~ 337 (339)
T PRK07581 332 ALKELL 337 (339)
T ss_pred HHHHHH
Confidence 776654
No 35
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.97 E-value=2e-28 Score=192.41 Aligned_cols=248 Identities=34% Similarity=0.630 Sum_probs=203.1
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC-----CCCCcchHHHHHHHHHHHHHHhhc---
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD-----HGRLFSLDEQVEHKMDFIRQELQN--- 108 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~-----~~~~~~~~~~~~~~~~~i~~~~~~--- 108 (312)
+..|||++|+||-.++|.+|+..+.+.|..++.|+++.+.||-.++.. ....++++++++...+++++....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 578999999999999999999999999877999999999999887644 456899999999999999997653
Q ss_pred CCCcEEEEeechHHHHHHHHHHhcc---ccceEEEEecccccccCCCCcccccchh-hhhhhhhHHHHHHHHHhcCCcHH
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSS---EKVIYYIGLYPFLALIRPSVTQSIIGRV-AASNIASTALSYIIASLGILPSK 184 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 184 (312)
.+.+++|+|||.|++++++++.+.+ .+|.+++++.|++.....++.+..+..+ ...+...........+...+|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~lP~~ 161 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSLLPES 161 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHHCCHH
Confidence 4568999999999999999999999 7899999999999988888877655552 33344444444344566888999
Q ss_pred HHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhc---CCcEEEEeecCCCCCChhH
Q 021479 185 ALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMREN---QSKIAFLFGVDDHWGPQEL 261 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~P~lii~G~~D~~~~~~~ 261 (312)
..+++++..+... +..+........++..+++.++|+.+|++.+.+..+.+.++.. ..++.+++|.+|.|+|.+.
T Consensus 162 ~~~~lv~~~~~~~--~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~ 239 (266)
T PF10230_consen 162 VLRWLVRWVMGFP--PPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVPNET 239 (266)
T ss_pred HHHHHHHHHcCCC--hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCCHHH
Confidence 9999997766554 3367777788899999999999999999999875423444443 7899999999999999999
Q ss_pred HHHHHHhCCC--CceeecCCCcccccc
Q 021479 262 YEEISEQVPD--VPLAIERHGHTHNFC 286 (312)
Q Consensus 262 ~~~~~~~~~~--~~~~i~~~gH~~~~~ 286 (312)
.+++.+.+|+ .++.+...|..|.|+
T Consensus 240 ~~~l~~~~~~~~~~~~v~~~~i~HaFc 266 (266)
T PF10230_consen 240 RDELIERYPGHEPDVVVDEEGIPHAFC 266 (266)
T ss_pred HHHHHHHcCCCCCeEEEecCCCCCCCC
Confidence 9999999994 456666667666653
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=4e-29 Score=208.08 Aligned_cols=277 Identities=11% Similarity=0.015 Sum_probs=159.2
Q ss_pred eccccceeeeecCC--CCceEEEEEcCCCCchhcHHHH---------HHHHH----HHcCCCccEEEeccCCC-ccCccC
Q 021479 21 VSIYTAEVLEIEAD--DPKLHVLFVPGNPGVITFYKDF---------VQSLY----EHLGGNASISAIGSAAQ-TKKNYD 84 (312)
Q Consensus 21 ~~g~~~~~~~~~~~--~~~~~iv~~HG~~~~~~~~~~~---------~~~l~----~~l~~~~~vi~~D~~G~-G~s~~~ 84 (312)
++|.++.|..++.. +.+|+|||+||++++...|..+ +..+. ..+.++|+||++|++|+ |.|...
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 45666778888752 2368899999999999853321 23354 33356899999999983 444311
Q ss_pred C----C---------CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCC
Q 021479 85 H----G---------RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRP 151 (312)
Q Consensus 85 ~----~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 151 (312)
. . ..++++++++++.++++++ +....++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 1 0 1579999999999999998 66632599999999999999999999999999998853321110
Q ss_pred CCccc--ccchhhh--------------hhhhhHHH-HHHHHHhcCCcHHHHHHHHHcccCCCC----c-hhHHHHHH--
Q 021479 152 SVTQS--IIGRVAA--------------SNIASTAL-SYIIASLGILPSKALRFLVSNSLGRSW----S-ATAVEAAC-- 207 (312)
Q Consensus 152 ~~~~~--~~~~~~~--------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-- 207 (312)
..... ....... .+...... .................+......... . ........
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 00000 0000000 00000000 000000000000000000000000000 0 00000000
Q ss_pred -----hhccchhHHHHHHHHHHHHHhhhc--C--CCC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCC----c
Q 021479 208 -----THLSQYHVMRNVLFMTMTEFKQLK--N--TPD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDV----P 273 (312)
Q Consensus 208 -----~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~ 273 (312)
.......... .. ...+.... . ..+ ++.+.+|++|+|+|+|++|.++|++..+.+++.++++ +
T Consensus 268 ~~~~~~~~~d~~~~~---~~-~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~ 343 (379)
T PRK00175 268 QGDKFVERFDANSYL---YL-TRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVS 343 (379)
T ss_pred HHHHHhhccCchHHH---HH-HHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeE
Confidence 0000110000 00 00011110 0 012 3778999999999999999999999999999999887 5
Q ss_pred ee-ec-CCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 274 LA-IE-RHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 274 ~~-i~-~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
+. ++ ++||.+++++|+ ++++.|.+||++.-
T Consensus 344 l~~i~~~~GH~~~le~p~----~~~~~L~~FL~~~~ 375 (379)
T PRK00175 344 YAEIDSPYGHDAFLLDDP----RYGRLVRAFLERAA 375 (379)
T ss_pred EEEeCCCCCchhHhcCHH----HHHHHHHHHHHhhh
Confidence 55 65 899999999876 77888888887653
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1.8e-28 Score=205.33 Aligned_cols=254 Identities=16% Similarity=0.120 Sum_probs=155.9
Q ss_pred eeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH
Q 021479 18 LSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH 97 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 97 (312)
.....+.++.+..+++ +++++|||+||++++...|.. +.+.|.++|+|+++|+||||.|. ......++++++++
T Consensus 113 ~~~~~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~~~~~----~~~~l~~~~~v~~~d~~g~G~s~-~~~~~~~~~~~~~~ 186 (371)
T PRK14875 113 KARIGGRTVRYLRLGE-GDGTPVVLIHGFGGDLNNWLF----NHAALAAGRPVIALDLPGHGASS-KAVGAGSLDELAAA 186 (371)
T ss_pred cceEcCcEEEEecccC-CCCCeEEEECCCCCccchHHH----HHHHHhcCCEEEEEcCCCCCCCC-CCCCCCCHHHHHHH
Confidence 4455566666665554 335789999999999999998 55556567999999999999996 33446789999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHH
Q 021479 98 KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIAS 177 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (312)
+.++++.+ +.. +++|+||||||.+++.+|..+|++++++|+++|........ ............
T Consensus 187 ~~~~~~~~--~~~-~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~--~~~~~~~~~~~~----------- 250 (371)
T PRK14875 187 VLAFLDAL--GIE-RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN--GDYIDGFVAAES----------- 250 (371)
T ss_pred HHHHHHhc--CCc-cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc--hhHHHHhhcccc-----------
Confidence 99999887 444 79999999999999999999999999999998642211100 000000000000
Q ss_pred hcCCcHHHHHHHHHcccC-CCCchhHHHHHHhhccchhHHHHHH-HHHHHHHhhhcCCCCh-hhhhhcCCcEEEEeecCC
Q 021479 178 LGILPSKALRFLVSNSLG-RSWSATAVEAACTHLSQYHVMRNVL-FMTMTEFKQLKNTPDW-AFMRENQSKIAFLFGVDD 254 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D 254 (312)
+..+..++...+.. ................... ..... ......+.......++ ..+.++++|+++++|++|
T Consensus 251 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 325 (371)
T PRK14875 251 ----RRELKPVLELLFADPALVTRQMVEDLLKYKRLDG-VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQD 325 (371)
T ss_pred ----hhHHHHHHHHHhcChhhCCHHHHHHHHHHhcccc-HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCC
Confidence 00000000000000 0001111111100000000 00000 0000001111111222 467789999999999999
Q ss_pred CCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 255 HWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
.++|++..+.+ .++.++. ++++||+.++++|+ ++.+.|.+||++
T Consensus 326 ~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~ 370 (371)
T PRK14875 326 RIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAA----DVNRLLAEFLGK 370 (371)
T ss_pred CccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHH----HHHHHHHHHhcc
Confidence 99998766543 3457788 89999999999876 788888888864
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=2.3e-28 Score=193.43 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=146.3
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCC-CCcchHHHHHH-HHHHHHHHhhcCCCcEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG-RLFSLDEQVEH-KMDFIRQELQNTEVPIV 114 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 114 (312)
+|+|||+||++++...|.+ +.+.|.++|+|+++|+||||.|+.... ..+++++.+++ +.++++.+ . .++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~----~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 73 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQA----LIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--G-IEPFF 73 (251)
T ss_pred CCEEEEEcCCCCchhhHHH----HHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--C-CCeEE
Confidence 3679999999999999999 555565689999999999999974332 46788888888 55566665 3 34899
Q ss_pred EEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHc-c
Q 021479 115 LVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSN-S 193 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 193 (312)
++||||||.+++.+|.++|++|+++++++|........... ...... ..... .+...........+... .
T Consensus 74 l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~---~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~ 144 (251)
T TIGR03695 74 LVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERA---ARRQND---EQLAQ---RFEQEGLEAFLDDWYQQPL 144 (251)
T ss_pred EEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhh---hhhhcc---hhhhh---HHHhcCccHHHHHHhcCce
Confidence 99999999999999999999999999988643211110000 000000 00000 00000001111111110 0
Q ss_pred cCC--CCchhHHHHHHhhccc--hhHHHHHHHHHHHHHhhhcCCCC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHh
Q 021479 194 LGR--SWSATAVEAACTHLSQ--YHVMRNVLFMTMTEFKQLKNTPD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQ 268 (312)
Q Consensus 194 ~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 268 (312)
+.. ................ ......... ... .....+ +..+.++++|+++++|++|..++ +..+.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~ 218 (251)
T TIGR03695 145 FASQKNLPPEQRQALRAKRLANNPEGLAKMLR----ATG-LGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKL 218 (251)
T ss_pred eeecccCChHHhHHHHHhcccccchHHHHHHH----Hhh-hhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhc
Confidence 000 0111111111111000 000111000 010 111122 35577899999999999998764 556778888
Q ss_pred CCCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 269 VPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 269 ~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
.++++++ ++++||..+++.|+ ++.+.+.+||+
T Consensus 219 ~~~~~~~~~~~~gH~~~~e~~~----~~~~~i~~~l~ 251 (251)
T TIGR03695 219 LPNLTLVIIANAGHNIHLENPE----AFAKILLAFLE 251 (251)
T ss_pred CCCCcEEEEcCCCCCcCccChH----HHHHHHHHHhC
Confidence 8999998 99999999999876 77777888763
No 39
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=3.5e-28 Score=201.43 Aligned_cols=263 Identities=15% Similarity=0.119 Sum_probs=160.1
Q ss_pred eeccccceeeeecC--CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH
Q 021479 20 NVSIYTAEVLEIEA--DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH 97 (312)
Q Consensus 20 ~~~g~~~~~~~~~~--~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 97 (312)
..++..+.+..|.+ ..++++|||+||++++...|..++..+.+. ||+|+++|+||||.|+.......+++..++|
T Consensus 117 ~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~---Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D 193 (395)
T PLN02652 117 GARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSC---GFGVYAMDWIGHGGSDGLHGYVPSLDYVVED 193 (395)
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHC---CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 33445666666665 345789999999999998899966666555 9999999999999998544455678888888
Q ss_pred HHHHHHHHhhc-CCCcEEEEeechHHHHHHHHHHhcc---ccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHH
Q 021479 98 KMDFIRQELQN-TEVPIVLVGHSIGAYVALEMLKRSS---EKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSY 173 (312)
Q Consensus 98 ~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (312)
+.++++.+... ...+++++||||||.+++.++. +| ++++++|+.+|........ +....+...
T Consensus 194 l~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~------------~~~~~~~~l 260 (395)
T PLN02652 194 TEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH------------PIVGAVAPI 260 (395)
T ss_pred HHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch------------HHHHHHHHH
Confidence 88888876321 2347999999999999998764 55 4799999999865321110 000000000
Q ss_pred HHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHh-hccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeec
Q 021479 174 IIASLGILPSKALRFLVSNSLGRSWSATAVEAACT-HLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGV 252 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 252 (312)
... ..|.................+........ ......... .......+. ... .....+.++++|+|+++|+
T Consensus 261 ~~~---~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~--~~~~~~~~~-~~~-~l~~~L~~I~vPvLIi~G~ 333 (395)
T PLN02652 261 FSL---VAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIR--VRTGHEILR-ISS-YLTRNFKSVTVPFMVLHGT 333 (395)
T ss_pred HHH---hCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCch--HHHHHHHHH-HHH-HHHhhcccCCCCEEEEEeC
Confidence 000 01110000000000000001111111100 000000000 000000011 110 0124567889999999999
Q ss_pred CCCCCChhHHHHHHHhCCC--Ccee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 253 DDHWGPQELYEEISEQVPD--VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 253 ~D~~~~~~~~~~~~~~~~~--~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
+|.++|++..+.+.+..++ .++. +++++|...++. + .+++.+.+.+||+..+.
T Consensus 334 ~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~-~--~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 334 ADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEP-E--REEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCC-C--HHHHHHHHHHHHHHHhh
Confidence 9999999999999887654 6677 999999988862 2 56889999999988764
No 40
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=1.2e-28 Score=203.83 Aligned_cols=270 Identities=12% Similarity=0.049 Sum_probs=157.7
Q ss_pred eeccccceeeeecCC--CCceEEEEEcCCCCchh-----------cHHHHHHHHH----HHcCCCccEEEeccCC--Ccc
Q 021479 20 NVSIYTAEVLEIEAD--DPKLHVLFVPGNPGVIT-----------FYKDFVQSLY----EHLGGNASISAIGSAA--QTK 80 (312)
Q Consensus 20 ~~~g~~~~~~~~~~~--~~~~~iv~~HG~~~~~~-----------~~~~~~~~l~----~~l~~~~~vi~~D~~G--~G~ 80 (312)
.++|.++.|..+++. ..+++|||+||++++.. .|+. +. ..+.++|+|+++|+|| ||.
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~----~~~~~~~l~~~~~~vi~~D~~G~~~g~ 87 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDD----LIGPGRAIDTDRYFVVCSNVLGGCYGS 87 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhh----ccCCCCCcCCCceEEEEecCCCCCCCC
Confidence 356778888888762 33578999999999763 3666 43 3335689999999999 565
Q ss_pred CccC----C-------CCCcchHHHHHHHHHHHHHHhhcCCCc-EEEEeechHHHHHHHHHHhccccceEEEEecccccc
Q 021479 81 KNYD----H-------GRLFSLDEQVEHKMDFIRQELQNTEVP-IVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLAL 148 (312)
Q Consensus 81 s~~~----~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~ 148 (312)
|... . ...++++++++++.++++++ +.. + ++|+||||||.+++.+|.++|++|+++|++++....
T Consensus 88 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 88 TGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 5321 1 12478999999999999998 565 6 999999999999999999999999999998854321
Q ss_pred cCCCCcccc-c-chhhhh-------------h-hhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCch------hHHHHH
Q 021479 149 IRPSVTQSI-I-GRVAAS-------------N-IASTALSYIIASLGILPSKALRFLVSNSLGRSWSA------TAVEAA 206 (312)
Q Consensus 149 ~~~~~~~~~-~-~~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 206 (312)
......... . ...... + ................+..+...+........... ......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
T TIGR01392 165 SAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESY 244 (351)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHH
Confidence 110000000 0 000000 0 00000000000000111111111110000000000 000000
Q ss_pred Hh-----hc--cchhHHHHHHHHHHHHHhhhc---CCCC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee
Q 021479 207 CT-----HL--SQYHVMRNVLFMTMTEFKQLK---NTPD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA 275 (312)
Q Consensus 207 ~~-----~~--~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 275 (312)
.. .. ....... .. ...+.... ...+ ++.+++|++|+|+|+|++|.++|++..+.+++.+|++++.
T Consensus 245 ~~~~~~~~~~~~d~~~~~---~~-~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~ 320 (351)
T TIGR01392 245 LRYQGDKFVDRFDANSYL---YL-TRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLR 320 (351)
T ss_pred HHHHHHHHHhhcCcchHH---HH-HHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCc
Confidence 00 00 0000000 00 00111110 0012 3788899999999999999999999999999999987643
Q ss_pred -----e-cCCCccccccccccchHHHHHHHHHHHH
Q 021479 276 -----I-ERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 276 -----i-~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+ +++||.+++++|+ ++++.|.+||+
T Consensus 321 v~~~~i~~~~GH~~~le~p~----~~~~~l~~FL~ 351 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETD----QVEELIRGFLR 351 (351)
T ss_pred eEEEEeCCCCCcchhhcCHH----HHHHHHHHHhC
Confidence 3 5899999999876 77788888764
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=4.6e-27 Score=224.21 Aligned_cols=258 Identities=14% Similarity=0.170 Sum_probs=154.4
Q ss_pred eeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCC-------CCCcchHHHHHHHHH
Q 021479 28 VLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH-------GRLFSLDEQVEHKMD 100 (312)
Q Consensus 28 ~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~-------~~~~~~~~~~~~~~~ 100 (312)
+.+.+..+++++|||+||++++...|.. +.+.|.++|+|+++|+||||.|+... ...+++++.++++.+
T Consensus 1362 ~~~~G~~~~~~~vVllHG~~~s~~~w~~----~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ 1437 (1655)
T PLN02980 1362 VHEVGQNAEGSVVLFLHGFLGTGEDWIP----IMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYK 1437 (1655)
T ss_pred EEecCCCCCCCeEEEECCCCCCHHHHHH----HHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHH
Confidence 3344443456789999999999999998 55556667999999999999996322 235689999999999
Q ss_pred HHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcC
Q 021479 101 FIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGI 180 (312)
Q Consensus 101 ~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (312)
+++++ ..+ +++|+||||||.+++.+|.++|++|+++|++++...... . . ..... ..........+.. ..
T Consensus 1438 ll~~l--~~~-~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~--~-~--~~~~~-~~~~~~~~~~l~~--~g 1506 (1655)
T PLN02980 1438 LIEHI--TPG-KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKD--E-V--ARKIR-SAKDDSRARMLID--HG 1506 (1655)
T ss_pred HHHHh--CCC-CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCc--h-H--HHHHH-hhhhhHHHHHHHh--hh
Confidence 99987 455 899999999999999999999999999999875321110 0 0 00000 0000000000000 00
Q ss_pred CcHHHHHHHHHcccCCCCchhHHHHHHhh-ccchhHHHHHHHHHHHHHhhhcCCCC-hhhhhhcCCcEEEEeecCCCCCC
Q 021479 181 LPSKALRFLVSNSLGRSWSATAVEAACTH-LSQYHVMRNVLFMTMTEFKQLKNTPD-WAFMRENQSKIAFLFGVDDHWGP 258 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~ 258 (312)
.......+.....+............... ..... ....... ...+. .....+ ++.++++++|+|+|+|++|..++
T Consensus 1507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-l~~~~-~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~ 1583 (1655)
T PLN02980 1507 LEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKD-VPSLAKL-LSDLS-IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK 1583 (1655)
T ss_pred HHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCC-HHHHHHH-HHHhh-hcccchHHHHHhhCCCCEEEEEECCCCccH
Confidence 00000000000000000000011111100 00000 0000000 00111 111122 36789999999999999999875
Q ss_pred hhHHHHHHHhCCC------------Ccee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 259 QELYEEISEQVPD------------VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 259 ~~~~~~~~~~~~~------------~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
+..+.+.+.+++ ++++ ++++||.+++++|+ ++++.|.+||++.-.
T Consensus 1584 -~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe----~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1584 -QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPL----PVIRALRKFLTRLHN 1641 (1655)
T ss_pred -HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHH----HHHHHHHHHHHhccc
Confidence 566677777765 3677 99999999999877 788888888876543
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.95 E-value=3.7e-26 Score=185.64 Aligned_cols=122 Identities=17% Similarity=0.044 Sum_probs=91.7
Q ss_pred eeeee-ccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCC-CCcchHHH
Q 021479 17 RLSNV-SIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG-RLFSLDEQ 94 (312)
Q Consensus 17 ~~~~~-~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~ 94 (312)
++... +|.++.|.+.+..+ +++|||+||++++...+ .+...+. .++|+|+++|+||||.|+.... ..+++++.
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~-~~~lvllHG~~~~~~~~-~~~~~~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPD-GKPVVFLHGGPGSGTDP-GCRRFFD---PETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred CeEEcCCCcEEEEEECcCCC-CCEEEEECCCCCCCCCH-HHHhccC---ccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 34444 45677777665433 45799999988876543 2222221 3479999999999999974322 24678889
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 95 VEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
++++..+++++ +.. +++++||||||.+++.++.++|++|+++|+++++.
T Consensus 82 ~~dl~~l~~~l--~~~-~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 82 VADIEKLREKL--GIK-NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHc--CCC-CEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 99999888887 455 79999999999999999999999999999988643
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=9.5e-27 Score=190.12 Aligned_cols=266 Identities=11% Similarity=0.129 Sum_probs=158.0
Q ss_pred eeeccccceeeeecCCCCceEEEEEcCCCCchh-cH-------------------------HHHHHHHHHHcCCCccEEE
Q 021479 19 SNVSIYTAEVLEIEADDPKLHVLFVPGNPGVIT-FY-------------------------KDFVQSLYEHLGGNASISA 72 (312)
Q Consensus 19 ~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~-~~-------------------------~~~~~~l~~~l~~~~~vi~ 72 (312)
...+|..+.+..|.+..++.+|+++||++++.. .| ..++..+.+. ||+|++
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~---G~~V~~ 79 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN---GYSVYG 79 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC---CCcEEE
Confidence 345778888888887778899999999999886 11 3444455444 999999
Q ss_pred eccCCCccCccC---CCCCcchHHHHHHHHHHHHHHhh--------------------cC-CCcEEEEeechHHHHHHHH
Q 021479 73 IGSAAQTKKNYD---HGRLFSLDEQVEHKMDFIRQELQ--------------------NT-EVPIVLVGHSIGAYVALEM 128 (312)
Q Consensus 73 ~D~~G~G~s~~~---~~~~~~~~~~~~~~~~~i~~~~~--------------------~~-~~~~~lvGhS~Gg~ia~~~ 128 (312)
+|+||||.|... .....++++.++|+.++++.... .. +.|++|+||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 999999999743 22235899999999999986421 11 4589999999999999999
Q ss_pred HHhccc--------cceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCch
Q 021479 129 LKRSSE--------KVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSA 200 (312)
Q Consensus 129 a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (312)
+.++++ .++|+|+++|++......... .. .. ......+...+..+. |..... .......++
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-~~-~~--~~~~~~l~~~~~~~~---p~~~~~----~~~~~~~~~ 228 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDD-SF-KF--KYFYLPVMNFMSRVF---PTFRIS----KKIRYEKSP 228 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCC-cc-hh--hhhHHHHHHHHHHHC---Cccccc----CccccccCh
Confidence 977642 589999999876432111000 00 00 000111111111111 110000 000000111
Q ss_pred hHHHHHHh-hccchhHHHHHHHHHHHHHhhhcCCCChhhhhhc--CCcEEEEeecCCCCCChhHHHHHHHhC--CCCcee
Q 021479 201 TAVEAACT-HLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMREN--QSKIAFLFGVDDHWGPQELYEEISEQV--PDVPLA 275 (312)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~ 275 (312)
........ .+....... ..+....+..... ....+..+ ++|+|+++|++|.+++++..+.+.+.. ++.++.
T Consensus 229 ~~~~~~~~Dp~~~~~~~s--~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~ 304 (332)
T TIGR01607 229 YVNDIIKFDKFRYDGGIT--FNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELH 304 (332)
T ss_pred hhhhHHhcCccccCCccc--HHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEE
Confidence 11111100 000000000 0010000111100 01123444 789999999999999999999887765 457777
Q ss_pred -ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 276 -IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 276 -i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
+++++|..+.|. + .+++.+.+.+||++
T Consensus 305 ~~~g~~H~i~~E~-~--~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 305 TLEDMDHVITIEP-G--NEEVLKKIIEWISN 332 (332)
T ss_pred EECCCCCCCccCC-C--HHHHHHHHHHHhhC
Confidence 899999999884 2 56888999999863
No 44
>PLN02511 hydrolase
Probab=99.95 E-value=1.1e-26 Score=193.38 Aligned_cols=254 Identities=12% Similarity=0.133 Sum_probs=139.0
Q ss_pred CCceEEEEEcCCCCchhc-H-HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCC
Q 021479 35 DPKLHVLFVPGNPGVITF-Y-KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEV 111 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~-~-~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~ 111 (312)
..+|+||++||++++... | ..++..+. .+||+|+++|+||||.|..... .......++|+.++++.+.. ....
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~---~~g~~vv~~d~rG~G~s~~~~~-~~~~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRAR---SKGWRVVVFNSRGCADSPVTTP-QFYSASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHH---HCCCEEEEEecCCCCCCCCCCc-CEEcCCchHHHHHHHHHHHHHCCCC
Confidence 447899999999876643 3 44444333 4499999999999999973222 22234555666666665421 1234
Q ss_pred cEEEEeechHHHHHHHHHHhcccc--ceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHH
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEK--VIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFL 189 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
+++++||||||.+++.++.++|++ |.+++++++......... ...... ...+...+...+..... . ....
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~--~~~~~~-~~~y~~~~~~~l~~~~~----~-~~~~ 245 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADE--DFHKGF-NNVYDKALAKALRKIFA----K-HALL 245 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHH--HHhccH-HHHHHHHHHHHHHHHHH----H-HHHH
Confidence 899999999999999999999987 888887765432100000 000000 00000000000000000 0 0000
Q ss_pred HHcccCCCCchhHHHHHHhhccchhHHHHHHHH------HHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHH-
Q 021479 190 VSNSLGRSWSATAVEAACTHLSQYHVMRNVLFM------TMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELY- 262 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~- 262 (312)
+... ........+.. ......+...... ...++ .........+++|++|+|+|+|++|+++|.+..
T Consensus 246 ~~~~-~~~~~~~~~~~----~~~~~~fd~~~t~~~~gf~~~~~y--y~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~ 318 (388)
T PLN02511 246 FEGL-GGEYNIPLVAN----AKTVRDFDDGLTRVSFGFKSVDAY--YSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIP 318 (388)
T ss_pred HhhC-CCccCHHHHHh----CCCHHHHHHhhhhhcCCCCCHHHH--HHHcCchhhhccCCCCeEEEEcCCCCcCCcccCc
Confidence 0000 00000000000 0000000000000 00001 111112356789999999999999999998754
Q ss_pred HHHHHhCCCCcee-ecCCCccccccccccc--hHHHHHHHHHHHHhhc
Q 021479 263 EEISEQVPDVPLA-IERHGHTHNFCCSEAG--SAWVASHVAGLIKNKI 307 (312)
Q Consensus 263 ~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~--~~~v~~~v~~~l~~~~ 307 (312)
..+.+..|++++. ++++||..++|.|+.. ..++.+.+.+||+...
T Consensus 319 ~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 319 REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 4566778999998 8999999999988653 2356666666665543
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=1.6e-26 Score=204.94 Aligned_cols=270 Identities=14% Similarity=0.131 Sum_probs=153.5
Q ss_pred ceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCC-CCCcchHHH
Q 021479 16 LRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH-GRLFSLDEQ 94 (312)
Q Consensus 16 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~ 94 (312)
..++..+|.++.+..++.. ++++|||+||++++...|.+ +.+.|.++|+|+++|+||||.|+... ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~-~~~~ivllHG~~~~~~~w~~----~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP-DRPTVVLVHGYPDNHEVWDG----VAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC-CCCeEEEEcCCCchHHHHHH----HHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 4456778888888777643 36789999999999999999 55555568999999999999997432 346889999
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc--cccceEEEEecccccccCCCCcccccchhhhh---hhhhH
Q 021479 95 VEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS--SEKVIYYIGLYPFLALIRPSVTQSIIGRVAAS---NIAST 169 (312)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 169 (312)
++|+.++++.+ ....+++|+||||||.+++.++.+. ++++..++.+++.................... .....
T Consensus 80 a~dl~~~i~~l--~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (582)
T PRK05855 80 ADDFAAVIDAV--SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQ 157 (582)
T ss_pred HHHHHHHHHHh--CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHH
Confidence 99999999997 5555699999999999999888762 34454444433211000000000000000000 00000
Q ss_pred HHHHH-HH--HhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhcc---chhHHHHH----HHHHHHHHhh-hcCCCChhh
Q 021479 170 ALSYI-IA--SLGILPSKALRFLVSNSLGRSWSATAVEAACTHLS---QYHVMRNV----LFMTMTEFKQ-LKNTPDWAF 238 (312)
Q Consensus 170 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~-~~~~~~~~~ 238 (312)
..... .. .....+.... .... ............ ........ .......+.. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (582)
T PRK05855 158 LLRSWYIYLFHLPVLPELLW----RLGL-----GRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPR 228 (582)
T ss_pred HhhhHHHHHHhCCCCcHHHh----ccch-----hhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCc
Confidence 00000 00 0000010000 0000 000000000000 00000000 0000000000 000001122
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCceeecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLAIERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
+..+++|+++|+|++|.++|+...+.+.+..++..+++.++||+.+++.|+ ++.+.|.+|+.+
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~ 291 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQ----VLAAAVAEFVDA 291 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChh----HHHHHHHHHHHh
Confidence 446899999999999999999999999988888888744589999999887 666777777764
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=9.5e-26 Score=163.18 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=150.0
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
-.|+|+||+.|+.+..+.+.+.|.+. ||.|.++.+||||... ..--..+.+++.+++.+--+.+.......|.++|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~---GyTv~aP~ypGHG~~~-e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~G 91 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNEN---GYTVYAPRYPGHGTLP-EDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVG 91 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHC---CceEecCCCCCCCCCH-HHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 56999999999999999988887777 9999999999999875 3334567788888877777776533556899999
Q ss_pred echHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCC
Q 021479 118 HSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRS 197 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (312)
.||||.+++.+|..+| ++++|.+|+........ ..+..+...+.+.. ....
T Consensus 92 lSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~------------~iie~~l~y~~~~k---------------k~e~ 142 (243)
T COG1647 92 LSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR------------IIIEGLLEYFRNAK---------------KYEG 142 (243)
T ss_pred ecchhHHHHHHHhhCC--ccceeeecCCcccccch------------hhhHHHHHHHHHhh---------------hccC
Confidence 9999999999999999 89999887543211111 00111111110000 0111
Q ss_pred CchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCC--Ccee
Q 021479 198 WSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPD--VPLA 275 (312)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~ 275 (312)
.+.+.+....+.....+ ... .. .+..+.. .....+..|..|++++.|++|+++|.+.+..+.+.+-. .++.
T Consensus 143 k~~e~~~~e~~~~~~~~-~~~-~~----~~~~~i~-~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~ 215 (243)
T COG1647 143 KDQEQIDKEMKSYKDTP-MTT-TA----QLKKLIK-DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELK 215 (243)
T ss_pred CCHHHHHHHHHHhhcch-HHH-HH----HHHHHHH-HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeE
Confidence 12222222222222111 000 00 0111110 11255778999999999999999999999999987643 5577
Q ss_pred -ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 276 -IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 276 -i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
++++||.....+ -.+.+.+.|..||++
T Consensus 216 ~~e~SgHVIt~D~---Erd~v~e~V~~FL~~ 243 (243)
T COG1647 216 WLEGSGHVITLDK---ERDQVEEDVITFLEK 243 (243)
T ss_pred EEccCCceeecch---hHHHHHHHHHHHhhC
Confidence 899999877664 267899999999863
No 47
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=5.7e-25 Score=183.87 Aligned_cols=219 Identities=14% Similarity=0.102 Sum_probs=137.0
Q ss_pred CCceEEEEEcCCCCch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 35 DPKLHVLFVPGNPGVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
++.|+||++||+.+.. ..|..+...+.+. ||+|+++|+||+|.|... ....+......++++++.....-...++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~~La~~---Gy~vl~~D~pG~G~s~~~-~~~~d~~~~~~avld~l~~~~~vd~~ri 267 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRDYLAPR---GIAMLTIDMPSVGFSSKW-KLTQDSSLLHQAVLNALPNVPWVDHTRV 267 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHHHHHhC---CCEEEEECCCCCCCCCCC-CccccHHHHHHHHHHHHHhCcccCcccE
Confidence 4577777777777654 4677766666555 999999999999999632 1223444455666676665411023589
Q ss_pred EEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcc
Q 021479 114 VLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNS 193 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (312)
.++||||||.+++.+|..+|++|+++|+++|++....... .... ..|......+....
T Consensus 268 ~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-----~~~~-----------------~~p~~~~~~la~~l 325 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-----KRQQ-----------------QVPEMYLDVLASRL 325 (414)
T ss_pred EEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch-----hhhh-----------------hchHHHHHHHHHHh
Confidence 9999999999999999999999999999987643111000 0000 00111111011100
Q ss_pred cCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhh-hhcCCcEEEEeecCCCCCChhHHHHHHHhCCCC
Q 021479 194 LGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFM-RENQSKIAFLFGVDDHWGPQELYEEISEQVPDV 272 (312)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 272 (312)
-........+... +..+.. .....+ .++++|+|+++|++|.++|++..+.+.+..++.
T Consensus 326 g~~~~~~~~l~~~--------------------l~~~sl-~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~ 384 (414)
T PRK05077 326 GMHDASDEALRVE--------------------LNRYSL-KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG 384 (414)
T ss_pred CCCCCChHHHHHH--------------------hhhccc-hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC
Confidence 0000011111100 000110 001112 578999999999999999999999999999999
Q ss_pred cee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 273 PLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 273 ~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
+++ ++++ ++++.+ +++.+.+.+||++.+
T Consensus 385 ~l~~i~~~---~~~e~~----~~~~~~i~~wL~~~l 413 (414)
T PRK05077 385 KLLEIPFK---PVYRNF----DKALQEISDWLEDRL 413 (414)
T ss_pred eEEEccCC---CccCCH----HHHHHHHHHHHHHHh
Confidence 988 8875 344543 488899999998765
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=8e-25 Score=178.87 Aligned_cols=253 Identities=12% Similarity=0.180 Sum_probs=140.5
Q ss_pred CceEEEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCc--chHHHHHHHHHHHHHHhhcCCC
Q 021479 36 PKLHVLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLF--SLDEQVEHKMDFIRQELQNTEV 111 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~ 111 (312)
++|+||++||++++... +..++..+.+. ||+|+++|+||||.+.......+ ...+++..+++++...+ ...
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~---G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--~~~ 131 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKR---GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREF--GHV 131 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHC---CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhC--CCC
Confidence 47899999999887443 45555555554 99999999999998752222222 12234444555555432 234
Q ss_pred cEEEEeechHHHHHHHHHHhcccc--ceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHH
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEK--VIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFL 189 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
+++++||||||.+++.++.++++. +.++|+++|+........ ...... ....... +.. .+.......
T Consensus 132 ~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~---~~~~~~-~~~~~~~---l~~---~l~~~~~~~- 200 (324)
T PRK10985 132 PTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY---RMEQGF-SRVYQRY---LLN---LLKANAARK- 200 (324)
T ss_pred CEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH---HHhhhH-HHHHHHH---HHH---HHHHHHHHH-
Confidence 899999999999999998887654 888888886443211000 000000 0000000 000 000000000
Q ss_pred HHcccCC-CCchhHHHHHHhhccchhHHHHHHHHH----HHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHH
Q 021479 190 VSNSLGR-SWSATAVEAACTHLSQYHVMRNVLFMT----MTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEE 264 (312)
Q Consensus 190 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~ 264 (312)
...+... ..+.+.+.. ..+...+....... ....+........+.++++++|+++|+|++|++++++....
T Consensus 201 ~~~~~~~~~~~~~~~~~----~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~ 276 (324)
T PRK10985 201 LAAYPGTLPINLAQLKS----VRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK 276 (324)
T ss_pred HHhccccccCCHHHHhc----CCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH
Confidence 0000000 001111100 00000000000000 00000111112235678999999999999999999988888
Q ss_pred HHHhCCCCcee-ecCCCccccccccc-cchHHHHHHHHHHHHhhcc
Q 021479 265 ISEQVPDVPLA-IERHGHTHNFCCSE-AGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 265 ~~~~~~~~~~~-i~~~gH~~~~~~~~-~~~~~v~~~v~~~l~~~~~ 308 (312)
+.+..++.++. ++++||+.+++..- .-..+..+.+.+|++..+.
T Consensus 277 ~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 277 PESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred HHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 87788888888 89999999998521 1235888999999987654
No 49
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.94 E-value=6.4e-24 Score=155.97 Aligned_cols=281 Identities=24% Similarity=0.401 Sum_probs=213.8
Q ss_pred cceeeeeccccceeeeecC-----CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCc-------
Q 021479 15 NLRLSNVSIYTAEVLEIEA-----DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKN------- 82 (312)
Q Consensus 15 ~~~~~~~~g~~~~~~~~~~-----~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~------- 82 (312)
+..++..+|..+..+.++. ..+++.|++++|++|....|.+|+..+...+.+.+.++.+-..||-.-+
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 4567788999998888876 4568999999999999999999999999999878999999999987542
Q ss_pred -cCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc--ccceEEEEecccccccCCCCcccccc
Q 021479 83 -YDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS--EKVIYYIGLYPFLALIRPSVTQSIIG 159 (312)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~p~~~~~~~~~~~~~~~ 159 (312)
......++++++++.-++++++..+. +.+++++|||.|+++.+.+..... -+|.+++++.|++.....++.+....
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk-~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t 160 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPK-DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLT 160 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCC-CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEee
Confidence 12335789999999999999998763 458999999999999999886432 36999999999999888777765544
Q ss_pred hhhhh-hhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhh
Q 021479 160 RVAAS-NIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAF 238 (312)
Q Consensus 160 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (312)
..... +..-.+... .+..+.|.+....+.+..+.....++......-.+..+..+++...++.++++.+.. .+.+.
T Consensus 161 ~~l~~~~hv~~lt~y--i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-~d~e~ 237 (301)
T KOG3975|consen 161 KVLRYLPHVVSLTSY--IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-RDIEY 237 (301)
T ss_pred eeeeeehhhhheeee--eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-hHHHH
Confidence 33211 111111111 144567777777667666644444455555556777888899999999999988875 45677
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCceee--cCCCccccccccccchHHHHHHHHHHH
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLAI--ERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~i--~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
+++..+-+.+.+|.+|.|+|.+....+++.+|..++.+ ++..|...... ++..+..+.+.+
T Consensus 238 ~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~----~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 238 CEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKH----AQYMANAVFDMI 300 (301)
T ss_pred HHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecc----cHHHHHHHHHhh
Confidence 88888899999999999999999999999999988884 44555433332 456666666654
No 50
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=8e-26 Score=160.74 Aligned_cols=248 Identities=15% Similarity=0.090 Sum_probs=164.1
Q ss_pred cccceeeeeccccceeeeecCCCCceEEEEEcCCCCch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCc--
Q 021479 13 SVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLF-- 89 (312)
Q Consensus 13 ~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~-- 89 (312)
..+.+-+.++|.++.|...+.+.. .|++++|..|+. ..|.+.+..+.+.+ .+.|+++|.||+|.|. ++...+
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~--~iLlipGalGs~~tDf~pql~~l~k~l--~~TivawDPpGYG~Sr-PP~Rkf~~ 94 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPN--YILLIPGALGSYKTDFPPQLLSLFKPL--QVTIVAWDPPGYGTSR-PPERKFEV 94 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCc--eeEecccccccccccCCHHHHhcCCCC--ceEEEEECCCCCCCCC-CCcccchH
Confidence 455667788999998888776543 488899976654 56777333333332 3999999999999997 333333
Q ss_pred -chHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhh
Q 021479 90 -SLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIAS 168 (312)
Q Consensus 90 -~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 168 (312)
-+..++++.+++++.+ ... ++.++|+|-||..|+..|+++++.|.++|..+...- ....... . +.
T Consensus 95 ~ff~~Da~~avdLM~aL--k~~-~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay--vn~~~~m------a---~k 160 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEAL--KLE-PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY--VNHLGAM------A---FK 160 (277)
T ss_pred HHHHHhHHHHHHHHHHh--CCC-CeeEeeecCCCeEEEEeeccChhhhhhheeecccce--ecchhHH------H---Hh
Confidence 4567899999999998 555 899999999999999999999999999997542110 0000000 0 00
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCC----hhhhhhcCC
Q 021479 169 TALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPD----WAFMRENQS 244 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~ 244 (312)
. ++....+. .+ ... -....+....++..+..-.+..+++.+..+ .-.+.+++|
T Consensus 161 g-iRdv~kWs-----------~r----------~R~-P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkc 217 (277)
T KOG2984|consen 161 G-IRDVNKWS-----------AR----------GRQ-PYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKC 217 (277)
T ss_pred c-hHHHhhhh-----------hh----------hcc-hHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccC
Confidence 0 00000000 00 000 001112222222222222222222322222 246789999
Q ss_pred cEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 245 KIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 245 P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
|++|++|+.|++++....-.+....+.+++. .+.++|..++-.++ +++..+.+|+++.
T Consensus 218 Ptli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~----eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 218 PTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAK----EFNKLVLDFLKST 276 (277)
T ss_pred CeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechH----HHHHHHHHHHhcc
Confidence 9999999999999999999999999999999 89999998887655 8889999999863
No 51
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=2.5e-24 Score=166.61 Aligned_cols=249 Identities=16% Similarity=0.232 Sum_probs=154.0
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc-CCCcE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN-TEVPI 113 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 113 (312)
...|+++++||+-|+...|+.+...+...+. ..|+++|.|.||.|+ ....++...+++|+..||+..... ...++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~--~~v~~vd~RnHG~Sp--~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLG--RDVYAVDVRNHGSSP--KITVHNYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhccccc--CceEEEecccCCCCc--cccccCHHHHHHHHHHHHHHcccccccCCc
Confidence 4578999999999999999997777777664 599999999999996 444556899999999999997311 24589
Q ss_pred EEEeechHH-HHHHHHHHhccccceEEEEec--ccccccCCCCccc--ccchhhhhhh-------hhHHHHHHHHHhcCC
Q 021479 114 VLVGHSIGA-YVALEMLKRSSEKVIYYIGLY--PFLALIRPSVTQS--IIGRVAASNI-------ASTALSYIIASLGIL 181 (312)
Q Consensus 114 ~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~--p~~~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~ 181 (312)
+|+|||||| .+++..+..+|+.+..+|.+. |- ....+.... .+..+..... ...+...+.. ...
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~--~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~--~~~ 201 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG--GVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE--VGF 201 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCc--cCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH--Hhc
Confidence 999999999 888888899999999999754 31 011110000 0000000000 0000000000 000
Q ss_pred cHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhH
Q 021479 182 PSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQEL 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 261 (312)
.....+++...+-... ......+......+... ..++....-..+.+. .....||+++.|.++..++.+.
T Consensus 202 d~~~~~fi~~nl~~~~-----~~~s~~w~~nl~~i~~~----~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~ 271 (315)
T KOG2382|consen 202 DNLVRQFILTNLKKSP-----SDGSFLWRVNLDSIASL----LDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEH 271 (315)
T ss_pred chHHHHHHHHhcCcCC-----CCCceEEEeCHHHHHHH----HHHHHhhcccccccc-cccccceeEEecCCCCCcChhH
Confidence 1111111111111000 00000011111111111 111111111112223 6678899999999999999999
Q ss_pred HHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 262 YEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 262 ~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
...+.+.+|.++++ ++++||+.++|+|+ .+.+.|.+|+++
T Consensus 272 ~~~~~~~fp~~e~~~ld~aGHwVh~E~P~----~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 272 YPRMEKIFPNVEVHELDEAGHWVHLEKPE----EFIESISEFLEE 312 (315)
T ss_pred HHHHHHhccchheeecccCCceeecCCHH----HHHHHHHHHhcc
Confidence 99999999999999 99999999999988 777777777765
No 52
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=9e-24 Score=174.48 Aligned_cols=274 Identities=10% Similarity=0.045 Sum_probs=157.2
Q ss_pred ccccceeeeecC-C-CCceEEEEEcCCCCchh-------------cHHHHHHHHHHH---c-CCCccEEEeccCCCccCc
Q 021479 22 SIYTAEVLEIEA-D-DPKLHVLFVPGNPGVIT-------------FYKDFVQSLYEH---L-GGNASISAIGSAAQTKKN 82 (312)
Q Consensus 22 ~g~~~~~~~~~~-~-~~~~~iv~~HG~~~~~~-------------~~~~~~~~l~~~---l-~~~~~vi~~D~~G~G~s~ 82 (312)
+.+++.|..++. + ....+||++|+++++.. +|.. +... + .+.|.||++|..|-|.|.
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~----~iG~g~~lDt~~yfvi~~n~lG~~~~~ 114 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDG----LIGPGKAIDTNKYFVISTDTLCNVQVK 114 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHh----ccCCCCCcCCCceEEEEecccCCCcCC
Confidence 345667778876 2 23578999999998642 3655 3322 2 237999999999877531
Q ss_pred cC-----------C---------CCCcchHHHHHHHHHHHHHHhhcCCCcEE-EEeechHHHHHHHHHHhccccceEEEE
Q 021479 83 YD-----------H---------GRLFSLDEQVEHKMDFIRQELQNTEVPIV-LVGHSIGAYVALEMLKRSSEKVIYYIG 141 (312)
Q Consensus 83 ~~-----------~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl 141 (312)
.+ + ...++++++++++.++++++ ++. +++ ++||||||++++.+|.++|++|+++|+
T Consensus 115 ~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l--gi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ 191 (389)
T PRK06765 115 DPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL--GIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIG 191 (389)
T ss_pred CCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc--CCC-CceEEEEECHHHHHHHHHHHHChHhhheEEE
Confidence 00 1 12478999999999999988 666 675 999999999999999999999999999
Q ss_pred ecccccccCCC-Cccc--ccchhhhhh------------hhh--HHHHHHHHHhcCCcHHHHHHHHHcc-cCCC----Cc
Q 021479 142 LYPFLALIRPS-VTQS--IIGRVAASN------------IAS--TALSYIIASLGILPSKALRFLVSNS-LGRS----WS 199 (312)
Q Consensus 142 ~~p~~~~~~~~-~~~~--~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 199 (312)
++......+.. .... ....+...+ ... .....+.......+.++...+.+.. .... ..
T Consensus 192 ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~ 271 (389)
T PRK06765 192 VIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVS 271 (389)
T ss_pred EecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcccccccccccc
Confidence 87432211110 0000 000000000 000 0011111112222333222111110 0000 00
Q ss_pred -hhHHHHHHhhc----cchhHHHHHHHHHH--HHHhhhcCCCCh-hhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCC-
Q 021479 200 -ATAVEAACTHL----SQYHVMRNVLFMTM--TEFKQLKNTPDW-AFMRENQSKIAFLFGVDDHWGPQELYEEISEQVP- 270 (312)
Q Consensus 200 -~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~- 270 (312)
...+....... .........+.+.. +.++.-....+. +.+.++++|+++|+|++|.++|++..+.+.+.++
T Consensus 272 ~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~ 351 (389)
T PRK06765 272 TLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQK 351 (389)
T ss_pred chhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 00111110000 00000001111110 011100111133 6788999999999999999999999999999886
Q ss_pred ---CCcee-ecC-CCccccccccccchHHHHHHHHHHHHhh
Q 021479 271 ---DVPLA-IER-HGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 271 ---~~~~~-i~~-~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
+++++ +++ +||..++++|+ ++.+.|.+||+++
T Consensus 352 ~~~~a~l~~I~s~~GH~~~le~p~----~~~~~I~~FL~~~ 388 (389)
T PRK06765 352 QGKYAEVYEIESINGHMAGVFDIH----LFEKKIYEFLNRK 388 (389)
T ss_pred cCCCeEEEEECCCCCcchhhcCHH----HHHHHHHHHHccc
Confidence 57777 875 89999999876 7888888888763
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=3.8e-23 Score=162.02 Aligned_cols=220 Identities=12% Similarity=0.087 Sum_probs=129.6
Q ss_pred eeccccceeeeecCC----CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCC-ccCccCCCCCcch---
Q 021479 20 NVSIYTAEVLEIEAD----DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQ-TKKNYDHGRLFSL--- 91 (312)
Q Consensus 20 ~~~g~~~~~~~~~~~----~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~-G~s~~~~~~~~~~--- 91 (312)
..+|.++.-....+. .+.++||++||++++...|..++..|.+. ||.|+.+|.||+ |.|++.- ...++
T Consensus 16 ~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~---G~~vLrfD~rg~~GeS~G~~-~~~t~s~g 91 (307)
T PRK13604 16 LENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSN---GFHVIRYDSLHHVGLSSGTI-DEFTMSIG 91 (307)
T ss_pred cCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHC---CCEEEEecCCCCCCCCCCcc-ccCccccc
Confidence 346666655554442 34689999999999887788977777776 999999999988 8996322 22232
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHH
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTAL 171 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (312)
..++..++++++.. . ..++.|+||||||.+|+..|... +++++|+.+|..... ..+....
T Consensus 92 ~~Dl~aaid~lk~~--~-~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~---------------d~l~~~~ 151 (307)
T PRK13604 92 KNSLLTVVDWLNTR--G-INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR---------------DTLERAL 151 (307)
T ss_pred HHHHHHHHHHHHhc--C-CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH---------------HHHHHhh
Confidence 33444445565554 3 34899999999999997777643 399999988854311 0000000
Q ss_pred HHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEee
Q 021479 172 SYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFG 251 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 251 (312)
......+|.. ..+..+...-..+... ..... ...+.........+.+++++.|+|+|||
T Consensus 152 ---~~~~~~~p~~-------------~lp~~~d~~g~~l~~~----~f~~~-~~~~~~~~~~s~i~~~~~l~~PvLiIHG 210 (307)
T PRK13604 152 ---GYDYLSLPID-------------ELPEDLDFEGHNLGSE----VFVTD-CFKHGWDTLDSTINKMKGLDIPFIAFTA 210 (307)
T ss_pred ---hcccccCccc-------------ccccccccccccccHH----HHHHH-HHhcCccccccHHHHHhhcCCCEEEEEc
Confidence 0000000000 0000000000000000 00000 0000000000112456678899999999
Q ss_pred cCCCCCChhHHHHHHHhCC--CCcee-ecCCCcccc
Q 021479 252 VDDHWGPQELYEEISEQVP--DVPLA-IERHGHTHN 284 (312)
Q Consensus 252 ~~D~~~~~~~~~~~~~~~~--~~~~~-i~~~gH~~~ 284 (312)
++|.++|.+.++.+.+.++ ++++. +++++|...
T Consensus 211 ~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 211 NNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred CCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 9999999999999999775 57777 999999644
No 54
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=6.2e-23 Score=169.47 Aligned_cols=290 Identities=15% Similarity=0.074 Sum_probs=160.5
Q ss_pred cccceee-eeccccceeeeecCC------CCceEEEEEcCCCCchhcHH------HHHHHHHHHcCCCccEEEeccCCCc
Q 021479 13 SVNLRLS-NVSIYTAEVLEIEAD------DPKLHVLFVPGNPGVITFYK------DFVQSLYEHLGGNASISAIGSAAQT 79 (312)
Q Consensus 13 ~~~~~~~-~~~g~~~~~~~~~~~------~~~~~iv~~HG~~~~~~~~~------~~~~~l~~~l~~~~~vi~~D~~G~G 79 (312)
+++.+.+ +-+|+.+.+..++.. .++++|+|+||+++++..|. .+...+++. ||+|+++|+||+|
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~---GydV~l~n~RG~~ 119 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH---GFDVWVGNVRGTR 119 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhC---CCCcccccccccc
Confidence 3444433 346666666665432 23678999999998888773 333334444 9999999999988
Q ss_pred cCccC------CC--CCcchHHHH-HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc---cceEEEEeccccc
Q 021479 80 KKNYD------HG--RLFSLDEQV-EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE---KVIYYIGLYPFLA 147 (312)
Q Consensus 80 ~s~~~------~~--~~~~~~~~~-~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~ 147 (312)
.|... .. ..+++++++ .|+.++++.......++++++||||||.+++.++ .+|+ +|+.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 66321 11 146788887 7888888876432235899999999999998555 5675 6889999988654
Q ss_pred ccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcH-HHHHHH--------------HHcccCC--CCchhHHHHHHhhc
Q 021479 148 LIRPSVTQSIIGRVAASNIASTALSYIIASLGILPS-KALRFL--------------VSNSLGR--SWSATAVEAACTHL 210 (312)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~~ 210 (312)
...... +. ...+. ......+...+ ....+.|. .....+ +..+.+. ..+...+.......
T Consensus 199 ~~~~~~-~~-~~~~~-~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~ 274 (395)
T PLN02872 199 LDHVTA-PL-VLRMV-FMHLDQMVVAM-GIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYE 274 (395)
T ss_pred hccCCC-HH-HHHHH-HHhHHHHHHHh-cCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcC
Confidence 321111 00 00000 00000000000 00011111 001111 1011111 11111111111111
Q ss_pred cchhHHHHHHHHHHH----HHhh-----------hcC-CCChhhhhhc--CCcEEEEeecCCCCCChhHHHHHHHhCCC-
Q 021479 211 SQYHVMRNVLFMTMT----EFKQ-----------LKN-TPDWAFMREN--QSKIAFLFGVDDHWGPQELYEEISEQVPD- 271 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~----~~~~-----------~~~-~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 271 (312)
-....+++..++..- .+.. ... .+..-.++++ ++|+++++|++|.+++++..+.+.+.+++
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~ 354 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSK 354 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCc
Confidence 112223333332210 0000 000 0111134566 57999999999999999999999998887
Q ss_pred Ccee-ecCCCccccccccccchHHHHHHHHHHHHhhccCCC
Q 021479 272 VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIPSLS 311 (312)
Q Consensus 272 ~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~~~~ 311 (312)
.++. +++.||..++.. ++..+++.+.|.+||++..+..+
T Consensus 355 ~~l~~l~~~gH~dfi~~-~eape~V~~~Il~fL~~~~~~~~ 394 (395)
T PLN02872 355 PELLYLENYGHIDFLLS-TSAKEDVYNHMIQFFRSLGKSSS 394 (395)
T ss_pred cEEEEcCCCCCHHHHhC-cchHHHHHHHHHHHHHHhhhccC
Confidence 5676 899999755532 33356899999999988765443
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=5.8e-24 Score=166.28 Aligned_cols=213 Identities=14% Similarity=0.121 Sum_probs=124.5
Q ss_pred ccEEEeccCCCccCcc---CCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 68 ASISAIGSAAQTKKNY---DHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 68 ~~vi~~D~~G~G~s~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
|+|+++|+||+|.|+. .....++.++.++++..+++.+ +.. +++++||||||.+++.+|+++|++|+++|++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~ 77 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL--GIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISP 77 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH--TTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh--CCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEee
Confidence 7899999999999984 4566789999999999999998 566 699999999999999999999999999999886
Q ss_pred cc--cccCCCCcccccchhhhhhhhhHHHHHHHH-HhcCCcHHHHHH-----HHHcccCCCCchhHHHHHHhhccchhHH
Q 021479 145 FL--ALIRPSVTQSIIGRVAASNIASTALSYIIA-SLGILPSKALRF-----LVSNSLGRSWSATAVEAACTHLSQYHVM 216 (312)
Q Consensus 145 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
+. ....... ................. ............ ............................
T Consensus 78 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00561_consen 78 PPDLPDGLWNR------IWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAF 151 (230)
T ss_dssp SSHHHHHHHHH------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHH
T ss_pred eccchhhhhHH------HHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHH
Confidence 41 0000000 00000000000000000 000000000000 0000000000000000000000000000
Q ss_pred HHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccch
Q 021479 217 RNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGS 292 (312)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~ 292 (312)
..... ..............+.++++|+++++|++|.++|++....+.+.+|+.+.+ ++++||..+++.|+++.
T Consensus 152 ~~~~~---~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 152 DNMFW---NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHH
T ss_pred hhhcc---ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhh
Confidence 00000 000001100112466789999999999999999999999999999999988 99999999999877433
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=4.5e-22 Score=164.56 Aligned_cols=254 Identities=14% Similarity=0.116 Sum_probs=141.3
Q ss_pred ceEEEEEcCCCCchhcH-----HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH-HHHHHHHHhh-cC
Q 021479 37 KLHVLFVPGNPGVITFY-----KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH-KMDFIRQELQ-NT 109 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~-----~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~ 109 (312)
+++||++||+..+...+ +.++..+.+. ||+|+++|++|+|.++ ...++++++.+ +.+.++.+.. ..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~---G~~V~~~D~~g~g~s~----~~~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLER---GQDVYLIDWGYPDRAD----RYLTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHC---CCeEEEEeCCCCCHHH----hcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 55799999986554443 5666666655 9999999999999875 23356665533 3333333211 23
Q ss_pred CCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHH
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFL 189 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
..+++++||||||.+++.+++.+|++|+++|+++|.+.............. ....... ......+|.......
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~p~~~~~~~ 207 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWAR---HVDIDLA----VDTMGNIPGELLNLT 207 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhcc---ccCHHHH----HHhcCCCCHHHHHHH
Confidence 358999999999999999999999999999999976654322111000000 0000000 001111222111100
Q ss_pred HHccc-------------CCCCchhHHHHHH---hhccch-hH-HHHHHHHHHHHHh--hhcCCC----C-hhhhhhcCC
Q 021479 190 VSNSL-------------GRSWSATAVEAAC---THLSQY-HV-MRNVLFMTMTEFK--QLKNTP----D-WAFMRENQS 244 (312)
Q Consensus 190 ~~~~~-------------~~~~~~~~~~~~~---~~~~~~-~~-~~~~~~~~~~~~~--~~~~~~----~-~~~l~~i~~ 244 (312)
+.... ....+++.+.... .+.... +. ......+....+. .+.... + ...++++++
T Consensus 208 f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~ 287 (350)
T TIGR01836 208 FLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKM 287 (350)
T ss_pred HHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCC
Confidence 00000 0000111111110 111110 00 0000000000000 011000 1 124778999
Q ss_pred cEEEEeecCCCCCChhHHHHHHHhCCCCc--eeecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 245 KIAFLFGVDDHWGPQELYEEISEQVPDVP--LAIERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 245 P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
|+++++|++|.++|++..+.+.+.+++.+ +.+.++||...+..+ ...+++...+.+||.+
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSG-KAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECc-hhHhhhhHHHHHHHHh
Confidence 99999999999999999999999887654 344458999988864 3456888999999976
No 57
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=2.6e-22 Score=160.11 Aligned_cols=233 Identities=14% Similarity=0.071 Sum_probs=128.8
Q ss_pred CceEEEEEcCCCC----chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc--C
Q 021479 36 PKLHVLFVPGNPG----VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN--T 109 (312)
Q Consensus 36 ~~~~iv~~HG~~~----~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~--~ 109 (312)
+++.+|++||+++ +...|..+++.+.+. ||+|+++|+||||.|... ..++++..+|+.+.++.+... .
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~---G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEA---GFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHC---CCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhhCCC
Confidence 4556777787653 333455544444444 899999999999998632 246667777777777765322 2
Q ss_pred CCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHH
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFL 189 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
.++++++||||||.+++.+|.. +++|+++|+++|.+....... . ........ .... ... .
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~-----~-----~~~~~~~~--~~~~---~~~----~ 158 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQA-----A-----SRIRHYYL--GQLL---SAD----F 158 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccch-----H-----HHHHHHHH--HHHh---ChH----H
Confidence 2469999999999999999875 468999999998643111000 0 00000000 0000 000 1
Q ss_pred HHcccCCCCchhHHHHHHhh-ccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHH------
Q 021479 190 VSNSLGRSWSATAVEAACTH-LSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELY------ 262 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~------ 262 (312)
.+..+...++-..+...... ............ ..... ..-++.+..+++|+++++|+.|...+ ...
T Consensus 159 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~ 231 (274)
T TIGR03100 159 WRKLLSGEVNLGSSLRGLGDALLKARQKGDEVA-----HGGLA-ERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGE 231 (274)
T ss_pred HHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcc-----cchHH-HHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccC
Confidence 11111111111111111000 000000000000 00000 01124566889999999999998764 222
Q ss_pred HHHHHhC--CCCcee-ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 263 EEISEQV--PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 263 ~~~~~~~--~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
....+.+ +++++. ++++||....+ ...+++.+.|.+||+
T Consensus 232 ~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 232 PAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred hhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 3444444 788888 99999965444 335689999999985
No 58
>PRK10566 esterase; Provisional
Probab=99.88 E-value=6.8e-21 Score=150.66 Aligned_cols=206 Identities=10% Similarity=0.056 Sum_probs=120.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcch-------HHHHHHHHHHHHHHhh
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSL-------DEQVEHKMDFIRQELQ 107 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~-------~~~~~~~~~~i~~~~~ 107 (312)
++.|+||++||++++...|..+...+.+. ||+|+++|+||||.+.... ....+ .+.++++.++++.+..
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~---G~~v~~~d~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQA---GFRVIMPDAPMHGARFSGD-EARRLNHFWQILLQNMQEFPTLRAAIRE 100 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhC---CCEEEEecCCcccccCCCc-cccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 34689999999999988888866666655 9999999999999863211 11111 2234444444444321
Q ss_pred c---CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHH
Q 021479 108 N---TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSK 184 (312)
Q Consensus 108 ~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (312)
. ..++++++||||||.+++.++.++|+....++++.+.. ...... .. .+..
T Consensus 101 ~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~----~~--~~~~ 154 (249)
T PRK10566 101 EGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY--------------------FTSLAR----TL--FPPL 154 (249)
T ss_pred cCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH--------------------HHHHHH----Hh--cccc
Confidence 1 13589999999999999999998886433444332100 000000 00 0000
Q ss_pred HHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhc-CCcEEEEeecCCCCCChhHHH
Q 021479 185 ALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMREN-QSKIAFLFGVDDHWGPQELYE 263 (312)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~ 263 (312)
.. ............ +..+........+.++ ++|+|+++|++|.++|++..+
T Consensus 155 ~~--------~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~ 206 (249)
T PRK10566 155 IP--------ETAAQQAEFNNI--------------------VAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESL 206 (249)
T ss_pred cc--------cccccHHHHHHH--------------------HHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHH
Confidence 00 000000000000 0001110111334565 789999999999999999999
Q ss_pred HHHHhCCC------Ccee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 264 EISEQVPD------VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 264 ~~~~~~~~------~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
.+.+.++. .++. ++++||... ....+.+.+||++.
T Consensus 207 ~l~~~l~~~g~~~~~~~~~~~~~~H~~~--------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 207 RLQQALRERGLDKNLTCLWEPGVRHRIT--------PEALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHhcCCCcceEEEecCCCCCccC--------HHHHHHHHHHHHhh
Confidence 98886643 3444 688999642 14457777888754
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.88 E-value=5.6e-21 Score=143.25 Aligned_cols=186 Identities=12% Similarity=0.058 Sum_probs=117.0
Q ss_pred eEEEEEcCCCCchhcHHH-HHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 38 LHVLFVPGNPGVITFYKD-FVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~-~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
|+|||+||++++...|+. .+..+......+|+|+++|+|||+ ++.++++.++++.+ ..+ +++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~--~~~-~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH--GGD-PLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc--CCC-CeEEE
Confidence 579999999999998874 233333333347999999999985 35677777888876 444 89999
Q ss_pred eechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCC
Q 021479 117 GHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGR 196 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (312)
||||||.+++.+|.++|. ++|+++|... + ...+ ........ ......
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~-------------~~~~----~~~~~~~~--------~~~~~~ 113 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVR-----P-------------FELL----TDYLGENE--------NPYTGQ 113 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCC-----H-------------HHHH----HHhcCCcc--------cccCCC
Confidence 999999999999999983 4687886432 0 0000 00000000 000000
Q ss_pred CCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-
Q 021479 197 SWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA- 275 (312)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~- 275 (312)
. ...+... +..+.. .+...+. ..+|+++++|++|.++|.+.+..+.+. ++..
T Consensus 114 ~-----------~~~~~~~-----------~~d~~~-~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~ 166 (190)
T PRK11071 114 Q-----------YVLESRH-----------IYDLKV-MQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTV 166 (190)
T ss_pred c-----------EEEcHHH-----------HHHHHh-cCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEE
Confidence 0 0000000 000110 1111233 677899999999999999999999885 3555
Q ss_pred ecCCCccccccccccchHHHHHHHHHHHH
Q 021479 276 IERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 276 i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+++++|.. ... +...+.+.+|++
T Consensus 167 ~~ggdH~f--~~~----~~~~~~i~~fl~ 189 (190)
T PRK11071 167 EEGGNHAF--VGF----ERYFNQIVDFLG 189 (190)
T ss_pred ECCCCcch--hhH----HHhHHHHHHHhc
Confidence 88888864 321 467777777764
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=1.2e-20 Score=175.02 Aligned_cols=262 Identities=13% Similarity=0.029 Sum_probs=149.4
Q ss_pred CceEEEEEcCCCCchhcHHHH-----HHHHHHHcCCCccEEEeccCCCccCccCCC-CCcchHHHHHHHHHHHHHHhhcC
Q 021479 36 PKLHVLFVPGNPGVITFYKDF-----VQSLYEHLGGNASISAIGSAAQTKKNYDHG-RLFSLDEQVEHKMDFIRQELQNT 109 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~-----~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 109 (312)
.+++|||+||++.+...|+.. +..|.+. ||+|+++|+ |.++.... ...++.+++..+.+.++......
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~---g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRA---GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHC---CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhh
Confidence 467899999999999999863 4444444 899999994 66653222 24678888877777776521112
Q ss_pred CCcEEEEeechHHHHHHHHHHhc-cccceEEEEecccccccCCCCcccc--c-----c----hhhhhhhhhH-HHHHHHH
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRS-SEKVIYYIGLYPFLALIRPSVTQSI--I-----G----RVAASNIAST-ALSYIIA 176 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~--~-----~----~~~~~~~~~~-~~~~~~~ 176 (312)
.++++|+||||||.+++.+++.+ +++|+++|++++.+......+.... . . .+........ .......
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 219 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQ 219 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHH
Confidence 34799999999999999998755 4589999998765543221110000 0 0 0000000000 0000000
Q ss_pred HhcCCcHHHHHH---HHHcccCCC--CchhHHHHHHhhc---c-chhHHHHHHHHHHHHHhhhcCC-C---C-hhhhhhc
Q 021479 177 SLGILPSKALRF---LVSNSLGRS--WSATAVEAACTHL---S-QYHVMRNVLFMTMTEFKQLKNT-P---D-WAFMREN 242 (312)
Q Consensus 177 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~l~~i 242 (312)
...|...... +.+...... .+++......... . ............... ..+... . . ...++++
T Consensus 220 --~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~-n~~~~g~~~~~~~~~~L~~i 296 (994)
T PRK07868 220 --MLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAH-NRMMTGGFAINGQMVTLADI 296 (994)
T ss_pred --hcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHh-CcccCceEEECCEEcchhhC
Confidence 0111111111 111111110 0001111110000 0 000111111110000 001110 0 1 1358899
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHHhCCCCce-e-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISEQVPDVPL-A-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
++|+|+++|++|.++|++..+.+.+.+|++++ . ++++||+.++.- ....+++...|.+||+++-
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g-~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVG-SRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeec-hhhhhhhChHHHHHHHHhc
Confidence 99999999999999999999999999999987 4 789999998886 4556689999999998764
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.87 E-value=3e-20 Score=157.77 Aligned_cols=251 Identities=13% Similarity=0.106 Sum_probs=138.4
Q ss_pred ceeeeecCCC---CceEEEEEcCCCCchhcHH-----HHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH
Q 021479 26 AEVLEIEADD---PKLHVLFVPGNPGVITFYK-----DFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH 97 (312)
Q Consensus 26 ~~~~~~~~~~---~~~~iv~~HG~~~~~~~~~-----~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 97 (312)
++.+.+.+.. .+++||++||+......|+ .++..+.+. ||+|+++|++|+|.+... .++++++.+
T Consensus 174 ~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q---Gf~V~~iDwrgpg~s~~~----~~~ddY~~~ 246 (532)
T TIGR01838 174 FQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ---GHTVFVISWRNPDASQAD----KTFDDYIRD 246 (532)
T ss_pred EEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHC---CcEEEEEECCCCCccccc----CChhhhHHH
Confidence 4455555432 4678999999987777664 667776666 999999999999988522 223343322
Q ss_pred -HHHHHHHHhh-cCCCcEEEEeechHHHHHH----HHHHhc-cccceEEEEecccccccCCCCcccccchhhhhhhhhHH
Q 021479 98 -KMDFIRQELQ-NTEVPIVLVGHSIGAYVAL----EMLKRS-SEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTA 170 (312)
Q Consensus 98 -~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (312)
+.+.++.+.. ...++++++||||||.++. .+++.+ +++|+++++++..++....... ........+..+
T Consensus 247 ~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l----~~f~~~~~~~~~ 322 (532)
T TIGR01838 247 GVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGEL----GVFVDEEIVAGI 322 (532)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchh----hhhcCchhHHHH
Confidence 3333332211 1344899999999999852 345555 7889999998865554322111 111100111111
Q ss_pred HHHHHHHhcCCcHHHH--------------HHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHH--HHHHh--hhcC
Q 021479 171 LSYIIASLGILPSKAL--------------RFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMT--MTEFK--QLKN 232 (312)
Q Consensus 171 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~ 232 (312)
... ....+.+|.... ...++.++....... .+...+......+....+.. ...+. .+..
T Consensus 323 e~~-~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~--fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~ 399 (532)
T TIGR01838 323 ERQ-NGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVP--FDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTT 399 (532)
T ss_pred HHH-HHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccc--hhHHHHhccCccchHHHHHHHHHHHHhcCCCcC
Confidence 110 011122222221 112222221111110 11111111111000000000 00010 0110
Q ss_pred C----CC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCcccccccccc
Q 021479 233 T----PD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEA 290 (312)
Q Consensus 233 ~----~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~ 290 (312)
. .+ ...+.+|++|+++++|++|.++|.+....+.+.+++.+.. ++++||..+++.|..
T Consensus 400 G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 400 GGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 0 11 2467899999999999999999999999999999988877 899999999998653
No 62
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.86 E-value=1.3e-20 Score=145.70 Aligned_cols=272 Identities=15% Similarity=0.155 Sum_probs=147.9
Q ss_pred eeeeccccceeeeecC---CCCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEeccCCCccCccCCCCCcc--h
Q 021479 18 LSNVSIYTAEVLEIEA---DDPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGSAAQTKKNYDHGRLFS--L 91 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~---~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~~G~G~s~~~~~~~~~--~ 91 (312)
.+...+.....+.|.. ...+|.||++||+.|+... +++..+...+ .+||.|+++|+|||+.+.......|+ .
T Consensus 53 ~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s--~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~ 130 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNS--PYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGE 130 (345)
T ss_pred EEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcC--HHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccc
Confidence 3344444444444433 3447899999999887654 3455555555 34899999999999998632222222 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--cc-eEEEEecccccccCCCC-cccccc-hhhhhhh
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--KV-IYYIGLYPFLALIRPSV-TQSIIG-RVAASNI 166 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v-~~lvl~~p~~~~~~~~~-~~~~~~-~~~~~~~ 166 (312)
.+++..+++.++.. ....++..+|.|+||.+...|..+..+ .+ +++++.+|+ +...... ...... ++.+..+
T Consensus 131 t~D~~~~l~~l~~~--~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~~ly~r~l 207 (345)
T COG0429 131 TEDIRFFLDWLKAR--FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEACAYRLDSGFSLRLYSRYL 207 (345)
T ss_pred hhHHHHHHHHHHHh--CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHHHHHhcCchhhhhhHHHH
Confidence 34445555555554 456799999999999666666655443 23 444444553 2221111 111111 2223333
Q ss_pred hhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHH----HHHHHHHHhhhcCCCChhhhhhc
Q 021479 167 ASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNV----LFMTMTEFKQLKNTPDWAFMREN 242 (312)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i 242 (312)
...+..........++ ....... ....+...+-..+... ..-..+..+..........+.+|
T Consensus 208 ~~~L~~~~~~kl~~l~-------------~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~I 273 (345)
T COG0429 208 LRNLKRNAARKLKELE-------------PSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKI 273 (345)
T ss_pred HHHHHHHHHHHHHhcC-------------cccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccccc
Confidence 3333322222111110 0001000 0000000000000000 00000001112222234578899
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHH-hCCCCcee-ecCCCccccccccccch-HHHHHHHHHHHHhhcc
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISE-QVPDVPLA-IERHGHTHNFCCSEAGS-AWVASHVAGLIKNKIP 308 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~-~~~~~~~~-i~~~gH~~~~~~~~~~~-~~v~~~v~~~l~~~~~ 308 (312)
.+|+|||++.+|++++++....... ..|++.+. -+.+||..++..+.... -|..+.+.+|++....
T Consensus 274 r~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 274 RKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999999999999987766665 56788888 77899999888433222 3888999999987754
No 63
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.86 E-value=1.2e-19 Score=137.52 Aligned_cols=107 Identities=16% Similarity=0.147 Sum_probs=96.2
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
+++..+||=+||.||+...|+.+...|.+. +.|+|.+++||+|.++..+...++-.+....+.++++.+ +++.++
T Consensus 32 gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~---~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l--~i~~~~ 106 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDFKYIRPPLDEA---GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDEL--GIKGKL 106 (297)
T ss_pred CCCceeEEEecCCCCCccchhhhhhHHHHc---CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHc--CCCCce
Confidence 455678999999999999999977777766 999999999999999977778999999999999999998 788899
Q ss_pred EEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 114 VLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
+.+|||.||-.|+.+|..+| +.|++|++|+-.
T Consensus 107 i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred EEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 99999999999999999996 789999998543
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=2.5e-20 Score=139.42 Aligned_cols=195 Identities=16% Similarity=0.246 Sum_probs=140.4
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
...+++++.||+......-..+...+...| +++|+.+|+.|+|.|.+ ........++++.+.+++++.+. ..++++
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~~l--n~nv~~~DYSGyG~S~G-~psE~n~y~Di~avye~Lr~~~g-~~~~Ii 133 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSIFL--NCNVVSYDYSGYGRSSG-KPSERNLYADIKAVYEWLRNRYG-SPERII 133 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhhcc--cceEEEEecccccccCC-CcccccchhhHHHHHHHHHhhcC-CCceEE
Confidence 346899999999666665445444444433 69999999999999984 44455888999999999999843 456999
Q ss_pred EEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHccc
Q 021479 115 LVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSL 194 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (312)
|+|+|+|+..++.+|.+.| ++++||.+|+.+.... +. +. .+.
T Consensus 134 l~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv------------------~~----------~~------~~~-- 175 (258)
T KOG1552|consen 134 LYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV------------------AF----------PD------TKT-- 175 (258)
T ss_pred EEEecCCchhhhhHhhcCC--cceEEEeccchhhhhh------------------hc----------cC------cce--
Confidence 9999999999999999999 9999999986531100 00 00 000
Q ss_pred CCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCC-c
Q 021479 195 GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDV-P 273 (312)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~ 273 (312)
. .. ++.+ ...+.++.++||+|++||++|.++|......+.+..++. +
T Consensus 176 -------~--~~--------------------~d~f---~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 -------T--YC--------------------FDAF---PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVE 223 (258)
T ss_pred -------E--Ee--------------------eccc---cccCcceeccCCEEEEecccCceecccccHHHHHhccccCC
Confidence 0 00 0001 113456789999999999999999999999999998775 4
Q ss_pred ee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 274 LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 274 ~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
-. +.++||.-.... .++.+.+..|+.....
T Consensus 224 pl~v~g~gH~~~~~~-----~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELY-----PEYIEHLRRFISSVLP 254 (258)
T ss_pred CcEEecCCCcccccC-----HHHHHHHHHHHHHhcc
Confidence 44 889999655442 3667777777765543
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.86 E-value=1.4e-20 Score=146.97 Aligned_cols=112 Identities=17% Similarity=0.159 Sum_probs=84.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
+++++|||+||+++....|...+..+++.|. .||+|+++|+||||.|... ....+++.+++|+.+.++.+......++
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~-~~~~~~~~~~~Dv~~ai~~L~~~~~~~v 101 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGD-FAAARWDVWKEDVAAAYRWLIEQGHPPV 101 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCc-cccCCHHHHHHHHHHHHHHHHhcCCCCE
Confidence 3468899999998765544444444555553 4899999999999999732 2345677777777665554422223589
Q ss_pred EEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 114 VLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
+|+||||||.+++.+|.++|++++++|+++|++.
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 9999999999999999999999999999998653
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=5.5e-20 Score=137.90 Aligned_cols=107 Identities=15% Similarity=0.191 Sum_probs=92.2
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
....|.+++.||++.+.-.|..+.+.+.... ..+|+++|+||||.+...+....+.+.++.|+..+++..+.+...++
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~--~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~i 148 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKI--RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQI 148 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhc--ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCce
Confidence 4568999999999999999999888777664 47889999999999987777788999999999999999986666789
Q ss_pred EEEeechHHHHHHHHHHh--ccccceEEEEec
Q 021479 114 VLVGHSIGAYVALEMLKR--SSEKVIYYIGLY 143 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~ 143 (312)
+||||||||.||...|.. -|. +.|++.+.
T Consensus 149 ilVGHSmGGaIav~~a~~k~lps-l~Gl~viD 179 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLPS-LAGLVVID 179 (343)
T ss_pred EEEeccccchhhhhhhhhhhchh-hhceEEEE
Confidence 999999999999887754 454 88888765
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=5.9e-20 Score=132.95 Aligned_cols=143 Identities=24% Similarity=0.342 Sum_probs=109.0
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
+||++||++++...|..++..+++. ||.|+.+|+||+|.+. -.+.++++++.+..... ...+++++||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~---G~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ---GYAVVAFDYPGHGDSD--------GADAVERVLADIRAGYP-DPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT---TEEEEEESCTTSTTSH--------HSHHHHHHHHHHHHHHC-TCCEEEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC---CCEEEEEecCCCCccc--------hhHHHHHHHHHHHhhcC-CCCcEEEEEE
Confidence 5899999999999999988877777 9999999999999884 11244444444433222 3458999999
Q ss_pred chHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCC
Q 021479 119 SIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSW 198 (312)
Q Consensus 119 S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (312)
|+||.+++.++.++ .+++++|+++|. +
T Consensus 69 S~Gg~~a~~~~~~~-~~v~~~v~~~~~-------~--------------------------------------------- 95 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PRVKAVVLLSPY-------P--------------------------------------------- 95 (145)
T ss_dssp THHHHHHHHHHHHS-TTESEEEEESES-------S---------------------------------------------
T ss_pred ccCcHHHHHHhhhc-cceeEEEEecCc-------c---------------------------------------------
Confidence 99999999999988 689999988851 0
Q ss_pred chhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCC-CCcee-e
Q 021479 199 SATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVP-DVPLA-I 276 (312)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~-i 276 (312)
+.+.+...+.|+++++|++|..+|.+..+.+.+.++ ..++. +
T Consensus 96 ------------------------------------~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i 139 (145)
T PF12695_consen 96 ------------------------------------DSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYII 139 (145)
T ss_dssp ------------------------------------GCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEE
T ss_pred ------------------------------------chhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEe
Confidence 001122345599999999999999999999888777 45677 9
Q ss_pred cCCCcc
Q 021479 277 ERHGHT 282 (312)
Q Consensus 277 ~~~gH~ 282 (312)
++++|+
T Consensus 140 ~g~~H~ 145 (145)
T PF12695_consen 140 PGAGHF 145 (145)
T ss_dssp TTS-TT
T ss_pred CCCcCc
Confidence 999995
No 68
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=1.5e-19 Score=144.32 Aligned_cols=249 Identities=17% Similarity=0.156 Sum_probs=137.8
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
.++++++||++++...|......+...... |+++++|+||||.|. .. .+.....++++..+++.+ ... +++++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~--~~~-~~~l~ 93 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL--GLE-KVVLV 93 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh--CCC-ceEEE
Confidence 448999999999999988833333333222 999999999999996 11 344555588888888887 445 59999
Q ss_pred eechHHHHHHHHHHhccccceEEEEecccccccCCCCccc--cc-ch-hhhhhhhhHH-HHHHHHHhcCCcHHHHHHHHH
Q 021479 117 GHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQS--II-GR-VAASNIASTA-LSYIIASLGILPSKALRFLVS 191 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~--~~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 191 (312)
||||||.+++.++.++|+++++++++++............ .. .. .......... ............ .......
T Consensus 94 G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 171 (282)
T COG0596 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG--LLAALAA 171 (282)
T ss_pred EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc--ccccccc
Confidence 9999999999999999999999999986443111110000 00 00 0000000000 000000000000 0000000
Q ss_pred cc--cCCCCchhHHHHHHhhccchhHHHHHHH-HHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHh
Q 021479 192 NS--LGRSWSATAVEAACTHLSQYHVMRNVLF-MTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQ 268 (312)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 268 (312)
.. ............... .. ...... .................+.++++|+++++|++|.+.|......+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~ 246 (282)
T COG0596 172 AARAGLAEALRAPLLGAAA----AA-FARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAA 246 (282)
T ss_pred cchhccccccccccchhHh----hh-hhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhh
Confidence 00 000000000000000 00 000000 00000001111011245667889999999999977777766777777
Q ss_pred CCC-Ccee-ecCCCccccccccccchHHHHHHHHHHH
Q 021479 269 VPD-VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 269 ~~~-~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
.+. .++. ++++||..++++|+ .+.+.+.+|+
T Consensus 247 ~~~~~~~~~~~~~gH~~~~~~p~----~~~~~i~~~~ 279 (282)
T COG0596 247 LPNDARLVVIPGAGHFPHLEAPE----AFAAALLAFL 279 (282)
T ss_pred CCCCceEEEeCCCCCcchhhcHH----HHHHHHHHHH
Confidence 785 7777 99999999999987 5556665543
No 69
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.83 E-value=1e-19 Score=131.36 Aligned_cols=217 Identities=16% Similarity=0.239 Sum_probs=149.8
Q ss_pred ccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHH
Q 021479 22 SIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDF 101 (312)
Q Consensus 22 ~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 101 (312)
+.++++.+-..+...+|+++++||..|+..+.-+.+..+...| +.+|+.+++||+|.|. .......+.-+++.++++
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l--~mnv~ivsYRGYG~S~-GspsE~GL~lDs~avldy 139 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNL--KMNVLIVSYRGYGKSE-GSPSEEGLKLDSEAVLDY 139 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHc--CceEEEEEeeccccCC-CCccccceeccHHHHHHH
Confidence 4455555555555678999999999999988777666666555 6899999999999998 444455677778888888
Q ss_pred HHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCC
Q 021479 102 IRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGIL 181 (312)
Q Consensus 102 i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
+...-...+.+++|+|-|+||.+|+.+|++..+++.++|+-+.+.+-... ..+ .....
T Consensus 140 l~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~-----------~i~-----------~v~p~ 197 (300)
T KOG4391|consen 140 LMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHM-----------AIP-----------LVFPF 197 (300)
T ss_pred HhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhh-----------hhh-----------eeccc
Confidence 87753334568999999999999999999999999999976643321000 000 00000
Q ss_pred c-HHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChh
Q 021479 182 P-SKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQE 260 (312)
Q Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 260 (312)
+ +.+..+..+. .. .....+.+-..|.|++.|..|.++||.
T Consensus 198 ~~k~i~~lc~kn-------------------------------------~~--~S~~ki~~~~~P~LFiSGlkDelVPP~ 238 (300)
T KOG4391|consen 198 PMKYIPLLCYKN-------------------------------------KW--LSYRKIGQCRMPFLFISGLKDELVPPV 238 (300)
T ss_pred hhhHHHHHHHHh-------------------------------------hh--cchhhhccccCceEEeecCccccCCcH
Confidence 1 1111111100 00 011223455789999999999999999
Q ss_pred HHHHHHHhCCCC--cee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 261 LYEEISEQVPDV--PLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 261 ~~~~~~~~~~~~--~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
..+.+.+.+|.. ++. +|++.|.-.+.+ + -..+.|.+||.++.
T Consensus 239 ~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-d----GYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 239 MMRQLYELCPSRTKRLAEFPDGTHNDTWIC-D----GYFQAIEDFLAEVV 283 (300)
T ss_pred HHHHHHHhCchhhhhheeCCCCccCceEEe-c----cHHHHHHHHHHHhc
Confidence 999999999874 455 899999877664 4 45566777776654
No 70
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=1.9e-17 Score=123.32 Aligned_cols=226 Identities=16% Similarity=0.176 Sum_probs=140.1
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
..++.++++|-.||++..|+. +...|.....++++++||+|.-- ......+++++++.+...+... ..+.|+.
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~----W~~~lp~~iel~avqlPGR~~r~-~ep~~~di~~Lad~la~el~~~--~~d~P~a 77 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRS----WSRRLPADIELLAVQLPGRGDRF-GEPLLTDIESLADELANELLPP--LLDAPFA 77 (244)
T ss_pred CCCceEEEecCCCCCHHHHHH----HHhhCCchhheeeecCCCccccc-CCcccccHHHHHHHHHHHhccc--cCCCCee
Confidence 456789999999999999999 88888878999999999999775 4445678999999888887742 2566999
Q ss_pred EEeechHHHHHHHHHHhccc---cceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHH
Q 021479 115 LVGHSIGAYVALEMLKRSSE---KVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVS 191 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (312)
++||||||++|.++|.+... ...++.+.+. ..+............-..++..+ .. ++..|..+..
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~---~aP~~~~~~~i~~~~D~~~l~~l----~~-lgG~p~e~le---- 145 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGC---RAPHYDRGKQIHHLDDADFLADL----VD-LGGTPPELLE---- 145 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecC---CCCCCcccCCccCCCHHHHHHHH----HH-hCCCChHHhc----
Confidence 99999999999999977643 2455554331 11111111111111111111111 11 1122211110
Q ss_pred cccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCC-
Q 021479 192 NSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVP- 270 (312)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~- 270 (312)
+++.+ . ..+...+.++..+... ....-..+.||+.++.|++|..+..+....+.+...
T Consensus 146 -------d~El~-~------------l~LPilRAD~~~~e~Y-~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~ 204 (244)
T COG3208 146 -------DPELM-A------------LFLPILRADFRALESY-RYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG 204 (244)
T ss_pred -------CHHHH-H------------HHHHHHHHHHHHhccc-ccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC
Confidence 11111 1 1111112222222221 111224789999999999999999999998888765
Q ss_pred CCceeecCCCccccccccccchHHHHHHHHHHHH
Q 021479 271 DVPLAIERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 271 ~~~~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
..++++-++||+...++.+ ++.+.+.+.+.
T Consensus 205 ~f~l~~fdGgHFfl~~~~~----~v~~~i~~~l~ 234 (244)
T COG3208 205 DFTLRVFDGGHFFLNQQRE----EVLARLEQHLA 234 (244)
T ss_pred CceEEEecCcceehhhhHH----HHHHHHHHHhh
Confidence 4566656689998877644 55555555553
No 71
>PRK11460 putative hydrolase; Provisional
Probab=99.80 E-value=1.2e-17 Score=129.62 Aligned_cols=177 Identities=16% Similarity=0.131 Sum_probs=112.3
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCC----------CC---CcchHHHHHHHHH
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH----------GR---LFSLDEQVEHKMD 100 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~----------~~---~~~~~~~~~~~~~ 100 (312)
..++++|||+||++++...|.++...+... .+.+..++.+|...+.... .. ...+.+.++.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~---~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPA---FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHH---CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 445789999999999999999977776654 3444555555543221000 00 1122334444445
Q ss_pred HHHHHhhc---CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHH
Q 021479 101 FIRQELQN---TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIAS 177 (312)
Q Consensus 101 ~i~~~~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (312)
+++.+... ..++++|+|||+||.+++.++.++|+.+.+++.+++.+.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~------------------------------ 139 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA------------------------------ 139 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc------------------------------
Confidence 55443211 124799999999999999999999987787775442110
Q ss_pred hcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCC
Q 021479 178 LGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWG 257 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 257 (312)
..+. . ...+.|+++++|++|.++
T Consensus 140 --~~~~----------------------------------------------~---------~~~~~pvli~hG~~D~vv 162 (232)
T PRK11460 140 --SLPE----------------------------------------------T---------APTATTIHLIHGGEDPVI 162 (232)
T ss_pred --cccc----------------------------------------------c---------ccCCCcEEEEecCCCCcc
Confidence 0000 0 012569999999999999
Q ss_pred ChhHHHHHHHhCC----CCcee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 258 PQELYEEISEQVP----DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 258 ~~~~~~~~~~~~~----~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
|.+..+.+.+.+. ++++. ++++||...- +..+.+.+||++.+.
T Consensus 163 p~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~--------~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 163 DVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP--------RLMQFALDRLRYTVP 210 (232)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH--------HHHHHHHHHHHHHcc
Confidence 9999888777553 24455 6889996532 344555566665553
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.78 E-value=2.1e-17 Score=133.81 Aligned_cols=226 Identities=13% Similarity=0.106 Sum_probs=124.5
Q ss_pred eeeecC-CCCceEEEEEcCCCCchhcHHHHH-HHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHH
Q 021479 28 VLEIEA-DDPKLHVLFVPGNPGVITFYKDFV-QSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 28 ~~~~~~-~~~~~~iv~~HG~~~~~~~~~~~~-~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
+++.++ .++.|+||++-|.-+....+..++ ..+.++ |+.++++|.||.|.|.. ..-..+.+.....+++++...
T Consensus 180 ~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~r---GiA~LtvDmPG~G~s~~-~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 180 YLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPR---GIAMLTVDMPGQGESPK-WPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp EEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHC---T-EEEEE--TTSGGGTT-T-S-S-CCHHHHHHHHHHHHS
T ss_pred EEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhC---CCEEEEEccCCCccccc-CCCCcCHHHHHHHHHHHHhcC
Confidence 344444 456788888888888887654422 334444 99999999999999862 222234456677777887774
Q ss_pred hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHH
Q 021479 106 LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKA 185 (312)
Q Consensus 106 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (312)
-.-...+|.++|.|+||++|.++|..+++|++++|.++|.+...-.. .......|...
T Consensus 256 p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~----------------------~~~~~~~P~my 313 (411)
T PF06500_consen 256 PWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD----------------------PEWQQRVPDMY 313 (411)
T ss_dssp TTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-----------------------HHHHTTS-HHH
T ss_pred CccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc----------------------HHHHhcCCHHH
Confidence 21123489999999999999999999999999999988765321110 00111223322
Q ss_pred HHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhh--hhcCCcEEEEeecCCCCCChhHHH
Q 021479 186 LRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFM--RENQSKIAFLFGVDDHWGPQELYE 263 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~~~~~~~ 263 (312)
...+..++-....+.+.+... +..+.- .....+ .+..+|+|.+.|++|+++|.+..+
T Consensus 314 ~d~LA~rlG~~~~~~~~l~~e--------------------l~~~SL-k~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~ 372 (411)
T PF06500_consen 314 LDVLASRLGMAAVSDESLRGE--------------------LNKFSL-KTQGLLSGRRCPTPLLAINGEDDPVSPIEDSR 372 (411)
T ss_dssp HHHHHHHCT-SCE-HHHHHHH--------------------GGGGST-TTTTTTTSS-BSS-EEEEEETT-SSS-HHHHH
T ss_pred HHHHHHHhCCccCCHHHHHHH--------------------HHhcCc-chhccccCCCCCcceEEeecCCCCCCCHHHHH
Confidence 222222211111111111111 111111 111233 578899999999999999999999
Q ss_pred HHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 264 EISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 264 ~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
.++....+.+.. ++...-+..++ .-...+.+||++++
T Consensus 373 lia~~s~~gk~~~~~~~~~~~gy~-------~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 373 LIAESSTDGKALRIPSKPLHMGYP-------QALDEIYKWLEDKL 410 (411)
T ss_dssp HHHHTBTT-EEEEE-SSSHHHHHH-------HHHHHHHHHHHHHH
T ss_pred HHHhcCCCCceeecCCCccccchH-------HHHHHHHHHHHHhc
Confidence 999887777777 87655322333 44567778998764
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=2e-16 Score=127.23 Aligned_cols=250 Identities=13% Similarity=0.152 Sum_probs=136.8
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHH-cCCCccEEEeccCCCccCccCCCC--CcchHHHHHHHHHHHHHHhhcCCCc
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEH-LGGNASISAIGSAAQTKKNYDHGR--LFSLDEQVEHKMDFIRQELQNTEVP 112 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~-l~~~~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~ 112 (312)
..|+||++||+.+++.. .++..++.. ..+||+|++++.||+|.+.-.... .....+++..+++.+++.+ ...+
T Consensus 124 ~~P~vvilpGltg~S~~--~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~--P~a~ 199 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHE--SYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRY--PQAP 199 (409)
T ss_pred CCcEEEEecCCCCCChh--HHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhC--CCCc
Confidence 46999999999877654 333444443 356999999999999998643333 4556778888888888884 4568
Q ss_pred EEEEeechHHHHHHHHHHhccc---cceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHH
Q 021479 113 IVLVGHSIGAYVALEMLKRSSE---KVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFL 189 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
+..+|.||||.+.+.|..+..+ .+.++.+.+|+-........ .....+..+...+...+.+........ +
T Consensus 200 l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~---~~~~~~~~y~~~l~~~l~~~~~~~r~~----~ 272 (409)
T KOG1838|consen 200 LFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI---ETPLYRRFYNRALTLNLKRIVLRHRHT----L 272 (409)
T ss_pred eEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH---hcccchHHHHHHHHHhHHHHHhhhhhh----h
Confidence 9999999999999999987654 35556655664321000000 000011111111111111110000000 0
Q ss_pred HHcccCCCCchhHHHHHHhhccchhHHHHHHHHH------HHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhH-H
Q 021479 190 VSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMT------MTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQEL-Y 262 (312)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~ 262 (312)
... . ....... ...+-+.+....... .+++ .........+.+|++|+++|.+.+|+++|+.. -
T Consensus 273 ~~~----~---vd~d~~~-~~~SvreFD~~~t~~~~gf~~~deY--Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip 342 (409)
T KOG1838|consen 273 FED----P---VDFDVIL-KSRSVREFDEALTRPMFGFKSVDEY--YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIP 342 (409)
T ss_pred hhc----c---chhhhhh-hcCcHHHHHhhhhhhhcCCCcHHHH--HhhcchhhhcccccccEEEEecCCCCCCCcccCC
Confidence 000 0 0000000 000001011110000 1111 22212235678999999999999999999953 3
Q ss_pred HHHHHhCCCCcee-ecCCCccccccccc-cchHHHHHHHHHHHHhh
Q 021479 263 EEISEQVPDVPLA-IERHGHTHNFCCSE-AGSAWVASHVAGLIKNK 306 (312)
Q Consensus 263 ~~~~~~~~~~~~~-i~~~gH~~~~~~~~-~~~~~v~~~v~~~l~~~ 306 (312)
.......|++-+. -..+||..+++.-. .-..++.+.+.+|+...
T Consensus 343 ~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 343 IDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred HHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 3334445666666 56799999999611 22335555566776544
No 74
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=4.8e-17 Score=128.27 Aligned_cols=274 Identities=15% Similarity=0.103 Sum_probs=157.6
Q ss_pred ccccceeeeecCCCC--ceEEEEEcCCCCchh-----------cHHHHHHHHHHH---c-CCCccEEEeccCCCc-cCcc
Q 021479 22 SIYTAEVLEIEADDP--KLHVLFVPGNPGVIT-----------FYKDFVQSLYEH---L-GGNASISAIGSAAQT-KKNY 83 (312)
Q Consensus 22 ~g~~~~~~~~~~~~~--~~~iv~~HG~~~~~~-----------~~~~~~~~l~~~---l-~~~~~vi~~D~~G~G-~s~~ 83 (312)
++.++.|..++.-.. ...|+++||+.++.. +|+. +... + ...|.||+.|..|.+ .|..
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~----liGpG~~iDt~r~fvIc~NvlG~c~GStg 109 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDD----LIGPGKPIDTERFFVICTNVLGGCKGSTG 109 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHH----hcCCCCCCCccceEEEEecCCCCCCCCCC
Confidence 446667777876332 557999999998543 4555 3322 1 236999999999876 3321
Q ss_pred ----CCC--------CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCC
Q 021479 84 ----DHG--------RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRP 151 (312)
Q Consensus 84 ----~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 151 (312)
.+. ...++.|++..-..+++++ ++.+=..+||-||||+.|++++..||++|.+++.++......+.
T Consensus 110 P~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L--GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 110 PSSINPGGKPYGSDFPVITIRDMVRAQRLLLDAL--GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred CCCcCCCCCccccCCCcccHHHHHHHHHHHHHhc--CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 222 3467889999888888998 78855559999999999999999999999999987742221111
Q ss_pred CCccccc--chhhhhhh--------------hhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCc----hhHHHHHHhhcc
Q 021479 152 SVTQSII--GRVAASNI--------------ASTALSYIIASLGILPSKALRFLVSNSLGRSWS----ATAVEAACTHLS 211 (312)
Q Consensus 152 ~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 211 (312)
....... ..+...+. --.+.+.+..+....+..+.+.+-+........ ...++.+.+..-
T Consensus 188 ~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg 267 (368)
T COG2021 188 NIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQG 267 (368)
T ss_pred HHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHH
Confidence 1000000 00000000 011122222222333333333322211100001 111222111110
Q ss_pred chhH--H--HHHHHHH--HHHHhhhcCCCCh-hhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc-ee-ec-CCCc
Q 021479 212 QYHV--M--RNVLFMT--MTEFKQLKNTPDW-AFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP-LA-IE-RHGH 281 (312)
Q Consensus 212 ~~~~--~--~~~~~~~--~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~-i~-~~gH 281 (312)
.... + ...+++. .+.++.-..+.+. +.++++++|++++.-+.|.++|++..+.+.+.++.+. +. |+ ..||
T Consensus 268 ~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GH 347 (368)
T COG2021 268 DKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGH 347 (368)
T ss_pred HHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCc
Confidence 0000 0 0111111 1111111111222 5688999999999999999999999999999998877 65 54 6899
Q ss_pred cccccccccchHHHHHHHHHHHHh
Q 021479 282 THNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 282 ~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
..++...+ .+...|.+||+.
T Consensus 348 DaFL~e~~----~~~~~i~~fL~~ 367 (368)
T COG2021 348 DAFLVESE----AVGPLIRKFLAL 367 (368)
T ss_pred hhhhcchh----hhhHHHHHHhhc
Confidence 99888533 677778888764
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.76 E-value=2.9e-16 Score=125.42 Aligned_cols=124 Identities=11% Similarity=0.090 Sum_probs=82.7
Q ss_pred ccccceeeeecC----CCCceEEEEEcCCCCchhcHHHH--HHHHHHHcCCCccEEEecc--CCCccCccC---------
Q 021479 22 SIYTAEVLEIEA----DDPKLHVLFVPGNPGVITFYKDF--VQSLYEHLGGNASISAIGS--AAQTKKNYD--------- 84 (312)
Q Consensus 22 ~g~~~~~~~~~~----~~~~~~iv~~HG~~~~~~~~~~~--~~~l~~~l~~~~~vi~~D~--~G~G~s~~~--------- 84 (312)
.+.++.+..+.+ .++.|+|+|+||++++...|... +..++.. .++.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~--~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE--HGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh--cCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 344544555443 34578999999999988877432 2223222 3799999998 555533200
Q ss_pred ----------CCCCcchHH-HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 85 ----------HGRLFSLDE-QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 85 ----------~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
....++..+ .++++..+++..+.-..++++++||||||.+|+.++.++|+.++++++++|...
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 001123333 356777777764221234799999999999999999999999999999887643
No 76
>PLN00021 chlorophyllase
Probab=99.75 E-value=1.3e-16 Score=128.31 Aligned_cols=106 Identities=19% Similarity=0.229 Sum_probs=76.8
Q ss_pred CCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHh----h-
Q 021479 33 ADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQEL----Q- 107 (312)
Q Consensus 33 ~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~----~- 107 (312)
..++.|+|||+||++++...|..++..+++. ||.|+++|++|++.+. ....++ .+.++.+++...+ +
T Consensus 48 ~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~---G~~VvapD~~g~~~~~----~~~~i~-d~~~~~~~l~~~l~~~l~~ 119 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNSFYSQLLQHIASH---GFIVVAPQLYTLAGPD----GTDEIK-DAAAVINWLSSGLAAVLPE 119 (313)
T ss_pred CCCCCCEEEEECCCCCCcccHHHHHHHHHhC---CCEEEEecCCCcCCCC----chhhHH-HHHHHHHHHHhhhhhhccc
Confidence 3455789999999999999999977777665 8999999999975332 112232 2444444444311 0
Q ss_pred ---cCCCcEEEEeechHHHHHHHHHHhccc-----cceEEEEecccc
Q 021479 108 ---NTEVPIVLVGHSIGAYVALEMLKRSSE-----KVIYYIGLYPFL 146 (312)
Q Consensus 108 ---~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~p~~ 146 (312)
...++++++||||||.+|+.+|..+++ +++++|++.|+.
T Consensus 120 ~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 120 GVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 011479999999999999999998874 689999888754
No 77
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.74 E-value=6.8e-17 Score=116.77 Aligned_cols=223 Identities=15% Similarity=0.107 Sum_probs=130.0
Q ss_pred CceEEEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 36 PKLHVLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
...++|++||+-++... ...++..+.+. ++.++.+|++|.|.|.. .-..-.....++|+..+++.+...-..--
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~---gis~fRfDF~GnGeS~g-sf~~Gn~~~eadDL~sV~q~~s~~nr~v~ 107 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKE---GISAFRFDFSGNGESEG-SFYYGNYNTEADDLHSVIQYFSNSNRVVP 107 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhc---CceEEEEEecCCCCcCC-ccccCcccchHHHHHHHHHHhccCceEEE
Confidence 35679999999987654 34444444444 89999999999999973 22223344455777777777622111235
Q ss_pred EEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcc
Q 021479 114 VLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNS 193 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (312)
+++|||-||.+++.+|.++++ ++.+|-++.-.. ....+. ..+.+....++.+.-
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd-------------------l~~~I~------eRlg~~~l~~ike~G 161 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD-------------------LKNGIN------ERLGEDYLERIKEQG 161 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC-chheEEcccccc-------------------hhcchh------hhhcccHHHHHHhCC
Confidence 789999999999999999998 677775442111 000000 011111122222221
Q ss_pred c-CCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhh-hhcCCcEEEEeecCCCCCChhHHHHHHHhCCC
Q 021479 194 L-GRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFM-RENQSKIAFLFGVDDHWGPQELYEEISEQVPD 271 (312)
Q Consensus 194 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 271 (312)
+ ......... ....... ..++.+......+.+ -..+||||-+||..|.++|.+.++.+++.+|+
T Consensus 162 fid~~~rkG~y----~~rvt~e----------SlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n 227 (269)
T KOG4667|consen 162 FIDVGPRKGKY----GYRVTEE----------SLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN 227 (269)
T ss_pred ceecCcccCCc----CceecHH----------HHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC
Confidence 1 100000000 0000000 001112210001111 13589999999999999999999999999999
Q ss_pred Ccee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 272 VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 272 ~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
-++. ++++.|.....+ .++......|++.+.
T Consensus 228 H~L~iIEgADHnyt~~q-----~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 228 HKLEIIEGADHNYTGHQ-----SQLVSLGLEFIKTRI 259 (269)
T ss_pred CceEEecCCCcCccchh-----hhHhhhcceeEEeee
Confidence 9999 999999766553 345555556655443
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.74 E-value=6.4e-16 Score=123.70 Aligned_cols=123 Identities=10% Similarity=0.076 Sum_probs=77.9
Q ss_pred cccceeeeecC----CCCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEeccCCCccC-----cc---C-C---
Q 021479 23 IYTAEVLEIEA----DDPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGSAAQTKK-----NY---D-H--- 85 (312)
Q Consensus 23 g~~~~~~~~~~----~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~~G~G~s-----~~---~-~--- 85 (312)
+..+.+..+-+ +++.|+|+|+||++++...|..... +...+ ..++.|+.+|..++|.- .. . .
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~-~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSG-AQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhh-HHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 34455544433 3457999999999998876644221 12222 23899999998877621 00 0 0
Q ss_pred ---CC-----Ccc-hHHHHHHHHHHHHHHhhc-CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 86 ---GR-----LFS-LDEQVEHKMDFIRQELQN-TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 86 ---~~-----~~~-~~~~~~~~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
.. ... .+...+++..+++..+.. ..++++++||||||..|+.++.++|+++++++.++|..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 00 001 122344555555553211 22479999999999999999999999999999988754
No 79
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.73 E-value=7.2e-16 Score=118.75 Aligned_cols=261 Identities=13% Similarity=0.094 Sum_probs=140.0
Q ss_pred eeccccceeeeecCCC-CceEEEEEcCCCCchhc-HHHHHHHH-HHHcCCCccEEEeccCCCccCcc--CCC-CCcchHH
Q 021479 20 NVSIYTAEVLEIEADD-PKLHVLFVPGNPGVITF-YKDFVQSL-YEHLGGNASISAIGSAAQTKKNY--DHG-RLFSLDE 93 (312)
Q Consensus 20 ~~~g~~~~~~~~~~~~-~~~~iv~~HG~~~~~~~-~~~~~~~l-~~~l~~~~~vi~~D~~G~G~s~~--~~~-~~~~~~~ 93 (312)
+..-..+++..++..+ .+|+||-.|-.+-+... |..|+..- .+.+.++|.|+-+|.||+..-.. +.+ ...++++
T Consensus 5 ~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~ 84 (283)
T PF03096_consen 5 ETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQ 84 (283)
T ss_dssp EETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHH
T ss_pred ccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHH
Confidence 3344566777777644 68999999998887665 66654331 12234589999999999976432 222 2568999
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHH
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSY 173 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (312)
.++++.++++++ +++ .++-+|--.||.|..++|.++|++|.|+||++|...... +. .....++..+
T Consensus 85 LAe~l~~Vl~~f--~lk-~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g------w~-----Ew~~~K~~~~ 150 (283)
T PF03096_consen 85 LAEMLPEVLDHF--GLK-SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG------WM-----EWFYQKLSSW 150 (283)
T ss_dssp HHCTHHHHHHHH--T----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HH-----HHHHHHHH--
T ss_pred HHHHHHHHHHhC--Ccc-EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc------HH-----HHHHHHHhcc
Confidence 999999999999 777 699999999999999999999999999999997543111 00 1111111111
Q ss_pred HHHHhcCCcHHHHHHHHHcccCCCC---chhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCcEEEE
Q 021479 174 IIASLGILPSKALRFLVSNSLGRSW---SATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSKIAFL 249 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii 249 (312)
.... .-......+.++..++.... ..+.+......+.......+...+ +.++..+.|. ...+...||+|++
T Consensus 151 ~L~~-~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f----~~sy~~R~DL~~~~~~~~c~vLlv 225 (283)
T PF03096_consen 151 LLYS-YGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALF----LNSYNSRTDLSIERPSLGCPVLLV 225 (283)
T ss_dssp ------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHH----HHHHHT-----SECTTCCS-EEEE
T ss_pred cccc-cccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHH----HHHHhccccchhhcCCCCCCeEEE
Confidence 1111 12233344444444442211 112222222222221111111111 2234444554 4456777999999
Q ss_pred eecCCCCCChhHHHHHHHhCCC--Ccee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 250 FGVDDHWGPQELYEEISEQVPD--VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 250 ~G~~D~~~~~~~~~~~~~~~~~--~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
.|++.+... ....+..++.. +.+. ++++|-....|+|. .+++.+.=||+.
T Consensus 226 vG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~----klaea~~lFlQG 278 (283)
T PF03096_consen 226 VGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPG----KLAEAFKLFLQG 278 (283)
T ss_dssp EETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HH----HHHHHHHHHHHH
T ss_pred EecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcH----HHHHHHHHHHcc
Confidence 998887643 34566666644 3355 88999999999987 666777667664
No 80
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.72 E-value=4.7e-16 Score=137.22 Aligned_cols=234 Identities=12% Similarity=0.099 Sum_probs=137.0
Q ss_pred ccceeeeeccccceeeeecCCCC-----ceEEEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCcc---C--
Q 021479 14 VNLRLSNVSIYTAEVLEIEADDP-----KLHVLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTK---K-- 81 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~~~~~~-----~~~iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~---s-- 81 (312)
...++...+|.++....+.+.+. -|+||++||.+..... |....+.++.. ||.|+.+++||-+. .
T Consensus 366 e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~---G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 366 EPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA---GYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcC---CeEEEEeCCCCCCccHHHHH
Confidence 33445455777777777666332 2899999999866554 44544444444 99999999995543 3
Q ss_pred ccC--CCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccc
Q 021479 82 NYD--HGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIG 159 (312)
Q Consensus 82 ~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 159 (312)
+.. ......++|..+.+. ++...-.-..+++.++|||+||.+++..+...| .+++.+...+.+.........
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~---- 516 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGES---- 516 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcccc----
Confidence 101 111223444444443 554431112248999999999999999999988 677776555422210000000
Q ss_pred hhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhh
Q 021479 160 RVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFM 239 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (312)
...+ ...+.... ..... . ...+..+......
T Consensus 517 ---~~~~------------~~~~~~~~--------~~~~~----~----------------------~~~~~~~sp~~~~ 547 (620)
T COG1506 517 ---TEGL------------RFDPEENG--------GGPPE----D----------------------REKYEDRSPIFYA 547 (620)
T ss_pred ---chhh------------cCCHHHhC--------CCccc----C----------------------hHHHHhcChhhhh
Confidence 0000 00000000 00000 0 0001111223445
Q ss_pred hhcCCcEEEEeecCCCCCChhHHHHHHHhCC----CCcee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 240 RENQSKIAFLFGVDDHWGPQELYEEISEQVP----DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 240 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
.++++|+|+|||++|..+|.+.+..+.+.+. .++++ +++.||.+.-. + ....+.+.+.+|+++.+.
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~--~-~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP--E-NRVKVLKEILDWFKRHLK 618 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc--h-hHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999998888777543 35666 89999986653 2 234677777888887764
No 81
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.70 E-value=2.8e-16 Score=130.08 Aligned_cols=111 Identities=19% Similarity=0.156 Sum_probs=78.2
Q ss_pred CCCceEEEEEcCCCCch--hcHHH-HHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh--c
Q 021479 34 DDPKLHVLFVPGNPGVI--TFYKD-FVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ--N 108 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~--~~~~~-~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 108 (312)
+..+|++|++||++++. ..|.+ +...+... ..+++||++|++|+|.+..... .......++++.++++.+.. +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~-~~d~nVI~VDw~g~g~s~y~~a-~~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYER-EPSANVIVVDWLSRAQQHYPTS-AAYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhc-cCCCEEEEEECCCcCCCCCccc-cccHHHHHHHHHHHHHHHHHhhC
Confidence 34578999999998754 23443 22222211 1269999999999998863322 22335566666666665421 1
Q ss_pred -CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 109 -TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 109 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
.-++++||||||||.+|..++..+|++|.+++++.|..
T Consensus 116 l~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 12489999999999999999999999999999998753
No 82
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.69 E-value=1.9e-14 Score=109.34 Aligned_cols=263 Identities=10% Similarity=0.072 Sum_probs=158.0
Q ss_pred eeeeccccceeeeecCC-CCceEEEEEcCCCCchhc-HHHHHHHH-HHHcCCCccEEEeccCCCccCc--cCCC-CCcch
Q 021479 18 LSNVSIYTAEVLEIEAD-DPKLHVLFVPGNPGVITF-YKDFVQSL-YEHLGGNASISAIGSAAQTKKN--YDHG-RLFSL 91 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~~-~~~~~iv~~HG~~~~~~~-~~~~~~~l-~~~l~~~~~vi~~D~~G~G~s~--~~~~-~~~~~ 91 (312)
-++..-...++..++.. +++|.||=.|..+-+... |..|+..- ...+..+|.|+-+|.|||-.-. .+.+ ...++
T Consensus 26 ~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsm 105 (326)
T KOG2931|consen 26 DVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSM 105 (326)
T ss_pred eeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCH
Confidence 33334456777777764 457889999999887665 65543321 1122336999999999996432 2233 35689
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHH
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTAL 171 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (312)
++.++++..+++++ +.+ .++-+|.-.|++|..++|..||++|.|+||+++..... .|. .+...++.
T Consensus 106 d~LAd~l~~VL~~f--~lk-~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~------gwi-----ew~~~K~~ 171 (326)
T KOG2931|consen 106 DDLADMLPEVLDHF--GLK-SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK------GWI-----EWAYNKVS 171 (326)
T ss_pred HHHHHHHHHHHHhc--Ccc-eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc------hHH-----HHHHHHHH
Confidence 99999999999998 777 69999999999999999999999999999998643211 111 11122222
Q ss_pred HHHHHHhcCCcHHHHHHHHHcccCCCC---chhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhh----hhcC
Q 021479 172 SYIIASLGILPSKALRFLVSNSLGRSW---SATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFM----RENQ 243 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l----~~i~ 243 (312)
.++... .-+.....+.++...|..+. ..+.+..+...+.......+...+ +.++..+.|. ... ...+
T Consensus 172 s~~l~~-~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~f----l~ayn~R~DL~~~r~~~~~tlk 246 (326)
T KOG2931|consen 172 SNLLYY-YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALF----LNAYNGRRDLSIERPKLGTTLK 246 (326)
T ss_pred HHHHHh-hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHH----HHHhcCCCCccccCCCcCcccc
Confidence 211111 12223334445555553322 222233332222211111111111 2234444443 111 2567
Q ss_pred CcEEEEeecCCCCCChhHHHHHHHhCC--CCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 244 SKIAFLFGVDDHWGPQELYEEISEQVP--DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
||+|++.|++.+.+.. ...+..++. ++.+. +.++|-.+..++|. .+++.+.=|++.
T Consensus 247 c~vllvvGd~Sp~~~~--vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~----kl~ea~~~FlqG 305 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHVSA--VVECNSKLDPTYTTLLKMADCGGLVQEEQPG----KLAEAFKYFLQG 305 (326)
T ss_pred ccEEEEecCCCchhhh--hhhhhcccCcccceEEEEcccCCcccccCch----HHHHHHHHHHcc
Confidence 9999999998875433 344444443 34455 88999999998988 666666666653
No 83
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.69 E-value=1.2e-15 Score=117.67 Aligned_cols=190 Identities=14% Similarity=0.095 Sum_probs=111.1
Q ss_pred HHHHHHcCCCccEEEeccCCCccCcc---CCCCCcchHHHHHHHHHHHHHHhhc---CCCcEEEEeechHHHHHHHHHHh
Q 021479 58 QSLYEHLGGNASISAIGSAAQTKKNY---DHGRLFSLDEQVEHKMDFIRQELQN---TEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 58 ~~l~~~l~~~~~vi~~D~~G~G~s~~---~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
..+++. ||.|+.+|+||.+.... .......-...++|+.+.++.+... ..+++.++|||+||.+++.++.+
T Consensus 8 ~~la~~---Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 8 QLLASQ---GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHTT---T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhC---CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 334455 99999999998875421 1111112234666666666665322 12589999999999999999999
Q ss_pred ccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCC-CchhHHHHHHhhc
Q 021479 132 SSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRS-WSATAVEAACTHL 210 (312)
Q Consensus 132 ~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 210 (312)
+|+++++++..+|........... .. +.. ...... ... ........
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~~---------~~---~~~--------------~~~~~~--~~~~~~~~~~~~----- 131 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGTT---------DI---YTK--------------AEYLEY--GDPWDNPEFYRE----- 131 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHHT---------CC---HHH--------------GHHHHH--SSTTTSHHHHHH-----
T ss_pred cceeeeeeeccceecchhcccccc---------cc---ccc--------------cccccc--Cccchhhhhhhh-----
Confidence 999999999988754322111000 00 000 000000 000 00000000
Q ss_pred cchhHHHHHHHHHHHHHhhhcCCCChhhhhh--cCCcEEEEeecCCCCCChhHHHHHHHhC----CCCcee-ecCCCccc
Q 021479 211 SQYHVMRNVLFMTMTEFKQLKNTPDWAFMRE--NQSKIAFLFGVDDHWGPQELYEEISEQV----PDVPLA-IERHGHTH 283 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~-i~~~gH~~ 283 (312)
...+ ..+.+ +++|+|+++|++|..+|+..+..+.+.+ ...++. ++++||..
T Consensus 132 ----------------~s~~------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~ 189 (213)
T PF00326_consen 132 ----------------LSPI------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGF 189 (213)
T ss_dssp ----------------HHHG------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSST
T ss_pred ----------------hccc------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCC
Confidence 0001 12233 7899999999999999999888877644 235566 89999943
Q ss_pred cccccccchHHHHHHHHHHHHhhcc
Q 021479 284 NFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 284 ~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
... + ......+.+.+|+++.+.
T Consensus 190 ~~~--~-~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 190 GNP--E-NRRDWYERILDFFDKYLK 211 (213)
T ss_dssp TSH--H-HHHHHHHHHHHHHHHHTT
T ss_pred CCc--h-hHHHHHHHHHHHHHHHcC
Confidence 322 2 234778888899988774
No 84
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.69 E-value=1.4e-15 Score=116.96 Aligned_cols=108 Identities=11% Similarity=-0.018 Sum_probs=70.8
Q ss_pred CCceEEEEEcCCCCchhcHHHH--HHHHHHHcCCCccEEEeccCCCccCccCC-----CC---CcchHHHHHHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDF--VQSLYEHLGGNASISAIGSAAQTKKNYDH-----GR---LFSLDEQVEHKMDFIRQ 104 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~--~~~l~~~l~~~~~vi~~D~~G~G~s~~~~-----~~---~~~~~~~~~~~~~~i~~ 104 (312)
++.|+||++||.+++...|... +..+++. .+|.|+++|++|++.+.... .. .......+.++++.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~--~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADR--YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHh--CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 4578999999999887766521 1222222 38999999999987543110 00 00111223333333333
Q ss_pred HhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 105 ELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 105 ~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
.+.-..++++|+|||+||.+++.++.++|+.+++++.+++
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 2211224899999999999999999999999999987764
No 85
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.68 E-value=1.4e-14 Score=122.29 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=141.4
Q ss_pred ceeeeecCC---CCceEEEEEcCCCCchhcH-----HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH
Q 021479 26 AEVLEIEAD---DPKLHVLFVPGNPGVITFY-----KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH 97 (312)
Q Consensus 26 ~~~~~~~~~---~~~~~iv~~HG~~~~~~~~-----~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 97 (312)
++.+.+.+. .-+.+||+++.+-.....+ +.+++.+.+. ||+|+.+|+++-+.++ ...+++++++.
T Consensus 201 ~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q---G~~VflIsW~nP~~~~----r~~~ldDYv~~ 273 (560)
T TIGR01839 201 LELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN---QLQVFIISWRNPDKAH----REWGLSTYVDA 273 (560)
T ss_pred eEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHc---CCeEEEEeCCCCChhh----cCCCHHHHHHH
Confidence 344555442 2357899999987555545 5777777776 9999999999876553 45678888877
Q ss_pred HHHHHHHHhh-cCCCcEEEEeechHHHHHHH----HHHhccc-cceEEEEecccccccCCCCcccccch--h-------h
Q 021479 98 KMDFIRQELQ-NTEVPIVLVGHSIGAYVALE----MLKRSSE-KVIYYIGLYPFLALIRPSVTQSIIGR--V-------A 162 (312)
Q Consensus 98 ~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~p~~~~~~~~~~~~~~~~--~-------~ 162 (312)
+.+.|+.... ...++++++|||+||.+++. +++++++ +|++++++...++............. + .
T Consensus 274 i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~ 353 (560)
T TIGR01839 274 LKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSY 353 (560)
T ss_pred HHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHH
Confidence 7776666421 23458999999999999997 8888886 89999998766664432211110100 0 0
Q ss_pred hhhhh-hHHHHHHHHHhcCCcHHHH-HHHHHcc-cCCCCchhHHHHHHhhccchhHHHHHHHHHH-HHHh--hhcC-C--
Q 021479 163 ASNIA-STALSYIIASLGILPSKAL-RFLVSNS-LGRSWSATAVEAACTHLSQYHVMRNVLFMTM-TEFK--QLKN-T-- 233 (312)
Q Consensus 163 ~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-- 233 (312)
....+ ...+... +.-+.|..+. .+++..+ +........ ...+......+....+... ..+. .+.. .
T Consensus 354 ~~G~lpg~~ma~~--F~~LrP~dliw~y~v~~yllg~~p~~fd---ll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l 428 (560)
T TIGR01839 354 QAGVLDGSEMAKV--FAWMRPNDLIWNYWVNNYLLGNEPPAFD---ILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDAL 428 (560)
T ss_pred hcCCcCHHHHHHH--HHhcCchhhhHHHHHHHhhcCCCcchhh---HHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCE
Confidence 00000 0011110 1111122111 1222222 122111111 2222222211111111110 1111 1111 0
Q ss_pred --CC-hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCC-CceeecCCCcccccccc
Q 021479 234 --PD-WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPD-VPLAIERHGHTHNFCCS 288 (312)
Q Consensus 234 --~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~~~~ 288 (312)
.. .-.+++|+||++++.|++|+++|.+....+.+.+++ .++++-.+||......|
T Consensus 429 ~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHIggivnp 487 (560)
T TIGR01839 429 EVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHIQSILNP 487 (560)
T ss_pred EECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCccccccCC
Confidence 00 135789999999999999999999999999998865 33446679997766653
No 86
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.67 E-value=6.9e-15 Score=113.34 Aligned_cols=186 Identities=17% Similarity=0.159 Sum_probs=106.1
Q ss_pred eeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCC------Ccc---CccC-----CC---CCcch
Q 021479 29 LEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAA------QTK---KNYD-----HG---RLFSL 91 (312)
Q Consensus 29 ~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G------~G~---s~~~-----~~---~~~~~ 91 (312)
+..+..+..++|||+||.|.+...+..+.... ......+++.+.-|- .|. +... .. ....+
T Consensus 6 i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~--~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i 83 (216)
T PF02230_consen 6 IIEPKGKAKPLVILLHGYGDSEDLFALLAELN--LALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGI 83 (216)
T ss_dssp EE--SST-SEEEEEE--TTS-HHHHHHHHHHH--TCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHH
T ss_pred EeCCCCCCceEEEEECCCCCCcchhHHHHhhc--ccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHH
Confidence 34445566899999999999996666532211 122367777765441 233 2111 11 12234
Q ss_pred HHHHHHHHHHHHHHhhc--CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhH
Q 021479 92 DEQVEHKMDFIRQELQN--TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIAST 169 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (312)
.+.++.+.++|+..... ..++++|+|+|.||.+|+.++.++|+.+.++|.+++.+.....
T Consensus 84 ~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~------------------ 145 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE------------------ 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC------------------
T ss_pred HHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc------------------
Confidence 55566666677654321 2348999999999999999999999999999988753210000
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEE
Q 021479 170 ALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFL 249 (312)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 249 (312)
... .... .-+.|++++
T Consensus 146 ------------------------------------------------------------~~~--~~~~--~~~~pi~~~ 161 (216)
T PF02230_consen 146 ------------------------------------------------------------LED--RPEA--LAKTPILII 161 (216)
T ss_dssp ------------------------------------------------------------CHC--CHCC--CCTS-EEEE
T ss_pred ------------------------------------------------------------ccc--cccc--cCCCcEEEE
Confidence 000 0000 116799999
Q ss_pred eecCCCCCChhHHHHHHHhC----CCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 250 FGVDDHWGPQELYEEISEQV----PDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 250 ~G~~D~~~~~~~~~~~~~~~----~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
||++|+++|.+..+...+.+ .+++++ +++.||... .+..+.+.+||++.
T Consensus 162 hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--------~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 162 HGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--------PEELRDLREFLEKH 215 (216)
T ss_dssp EETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHHH
T ss_pred ecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC--------HHHHHHHHHHHhhh
Confidence 99999999999888766644 235566 788999543 24455677787765
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.67 E-value=4.4e-15 Score=114.82 Aligned_cols=185 Identities=17% Similarity=0.163 Sum_probs=112.5
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCcc-CccCCCC-Ccc--------hHHHHHHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTK-KNYDHGR-LFS--------LDEQVEHKMDFIRQ 104 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~-s~~~~~~-~~~--------~~~~~~~~~~~i~~ 104 (312)
++.|.||++|++.|-....+.+...+++. ||.|+++|+-+-.. ....... ... .+...+++...++.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~---Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 88 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEE---GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDY 88 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHT---T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhc---CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 46899999999998877777877777776 99999999865443 1101111 001 22344555555555
Q ss_pred HhhcC---CCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCC
Q 021479 105 ELQNT---EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGIL 181 (312)
Q Consensus 105 ~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
+.... ..++.++|+||||.+++.+|.+. +.+++.|...|...
T Consensus 89 l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~---------------------------------- 133 (218)
T PF01738_consen 89 LRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP---------------------------------- 133 (218)
T ss_dssp HHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS----------------------------------
T ss_pred HHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC----------------------------------
Confidence 43222 35899999999999999999887 57888886543000
Q ss_pred cHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhH
Q 021479 182 PSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQEL 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 261 (312)
. ....+...++++|+++++|++|+.+|.+.
T Consensus 134 ------------------------------------------------~--~~~~~~~~~~~~P~l~~~g~~D~~~~~~~ 163 (218)
T PF01738_consen 134 ------------------------------------------------P--PPPLEDAPKIKAPVLILFGENDPFFPPEE 163 (218)
T ss_dssp ------------------------------------------------G--GGHHHHGGG--S-EEEEEETT-TTS-HHH
T ss_pred ------------------------------------------------C--CcchhhhcccCCCEeecCccCCCCCChHH
Confidence 0 00112235678999999999999999997
Q ss_pred HHHHHHhC----CCCcee-ecCCCccccccccc----cchHHHHHHHHHHHHhhc
Q 021479 262 YEEISEQV----PDVPLA-IERHGHTHNFCCSE----AGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 262 ~~~~~~~~----~~~~~~-i~~~gH~~~~~~~~----~~~~~v~~~v~~~l~~~~ 307 (312)
.+.+.+.+ ...+++ +++++|.-.....+ ...+.-.+.+.+|+++.+
T Consensus 164 ~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 164 VEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 66666544 445666 88899965544422 344566777888887753
No 88
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.67 E-value=9.6e-14 Score=113.91 Aligned_cols=255 Identities=12% Similarity=0.014 Sum_probs=147.5
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
|+||++.-+.+.... +.+.+.+.|-.|+.|+.+|+.--+..+ .....++++++++.+.++++.. .. +++++|
T Consensus 103 ~pvLiV~Pl~g~~~~---L~RS~V~~Ll~g~dVYl~DW~~p~~vp-~~~~~f~ldDYi~~l~~~i~~~---G~-~v~l~G 174 (406)
T TIGR01849 103 PAVLIVAPMSGHYAT---LLRSTVEALLPDHDVYITDWVNARMVP-LSAGKFDLEDYIDYLIEFIRFL---GP-DIHVIA 174 (406)
T ss_pred CcEEEEcCCchHHHH---HHHHHHHHHhCCCcEEEEeCCCCCCCc-hhcCCCCHHHHHHHHHHHHHHh---CC-CCcEEE
Confidence 689999988754433 345566666449999999998776553 2345679999999999999876 33 499999
Q ss_pred echHHHHHHHHHHhc-----cccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHH--------h-cCCcH
Q 021479 118 HSIGAYVALEMLKRS-----SEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIAS--------L-GILPS 183 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~-----p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~ 183 (312)
+|+||..++.+++.. |.+++++++++.+++..... .....+.....+..+....... . ...|.
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p---~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASP---TVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCC---chHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 999999988776654 66799999988667654321 1111111111111111111000 0 01222
Q ss_pred HHHHHHH----------------Hccc-CCCCchhHHHHHHhhccchh-----HHHHHHHHHHHHHhhhcCC-----CCh
Q 021479 184 KALRFLV----------------SNSL-GRSWSATAVEAACTHLSQYH-----VMRNVLFMTMTEFKQLKNT-----PDW 236 (312)
Q Consensus 184 ~~~~~~~----------------~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~ 236 (312)
......+ ..+. ..............++.... ...+.+.....+. .+... ...
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n-~L~~G~l~v~G~~ 330 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQF-LLPQGKFIVEGKR 330 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhC-CccCCcEEECCEE
Confidence 2221111 1111 11111111111111111110 1111111100000 01110 001
Q ss_pred hhhhhcC-CcEEEEeecCCCCCChhHHHHHHHhC---CCCc--ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 237 AFMRENQ-SKIAFLFGVDDHWGPQELYEEISEQV---PDVP--LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 237 ~~l~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~--~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
-.+++|+ +|++.+.|++|.++|+...+.+.+.+ +..+ .. .+++||...|.- ....+++...|.+||.+
T Consensus 331 Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G-~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 331 VDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSG-SRFREEIYPLVREFIRR 405 (406)
T ss_pred ecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeC-hhhhhhhchHHHHHHHh
Confidence 2577999 99999999999999999999988874 5433 23 568999999986 45667899999999975
No 89
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.66 E-value=1.3e-14 Score=112.95 Aligned_cols=239 Identities=17% Similarity=0.129 Sum_probs=86.6
Q ss_pred CceEEEEEcCCCCch---hcHHHHHHHHHHHcC-CCccEEEeccC----CCccCccCCCCCcchHHHHHHHHHHHHHHhh
Q 021479 36 PKLHVLFVPGNPGVI---TFYKDFVQSLYEHLG-GNASISAIGSA----AQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ 107 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~---~~~~~~~~~l~~~l~-~~~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~ 107 (312)
.+-.||||.|.+... .+... |++.|. .+|.|+-+-++ |+|.+ +++++++++.++|+.+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~----La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~ 99 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPD----LAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRS 99 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHH----HHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHH----HHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHH
Confidence 455799999987643 33445 666664 38999998765 56554 699999999888887654
Q ss_pred c-----CCCcEEEEeechHHHHHHHHHHhcc-----ccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHH
Q 021479 108 N-----TEVPIVLVGHSIGAYVALEMLKRSS-----EKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIAS 177 (312)
Q Consensus 108 ~-----~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (312)
. ..++|+|+|||-|+.-+++|+.... .+|.|+||-+|+.+.......... ...+..........
T Consensus 100 ~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~------~~~~~~~v~~A~~~ 173 (303)
T PF08538_consen 100 EKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE------REAYEELVALAKEL 173 (303)
T ss_dssp HS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---------HHHHHHHHHHH
T ss_pred hhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc------hHHHHHHHHHHHHH
Confidence 3 2458999999999999999997653 579999999996653332221100 01122222211111
Q ss_pred h--cCCcHHHHHHHHHcccCCCCchhHHHH-HHhhccchhHHHHHHHHHHHHH--hhhcCCCChhhhhhcCCcEEEEeec
Q 021479 178 L--GILPSKALRFLVSNSLGRSWSATAVEA-ACTHLSQYHVMRNVLFMTMTEF--KQLKNTPDWAFMRENQSKIAFLFGV 252 (312)
Q Consensus 178 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~i~~P~lii~G~ 252 (312)
. +.....+........+. +..+.. ....+..+. ..+.+ ..+.+..-.+.+..+..|+|+++++
T Consensus 174 i~~g~~~~~lp~~~~~~~~~----~~PiTA~Rf~SL~s~~--------gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg 241 (303)
T PF08538_consen 174 IAEGKGDEILPREFTPLVFY----DTPITAYRFLSLASPG--------GDDDYFSSDLSDERLKKTFGKVSKPLLVLYSG 241 (303)
T ss_dssp HHCT-TT-GG----GGTTT-----SS---HHHHHT-S-SS--------HHHHTHHHHHTT-HHHHTGGG--S-EEEEEE-
T ss_pred HHcCCCCceeeccccccccC----CCcccHHHHHhccCCC--------CcccccCCCCCHHHHHHHhccCCCceEEEecC
Confidence 1 00000011111100000 000111 111111111 11111 1122211125677899999999999
Q ss_pred CCCCCChhHH-HHHHHhCCC--------Cce-eecCCCccccccccccchHHHHHHHHHHHH
Q 021479 253 DDHWGPQELY-EEISEQVPD--------VPL-AIERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 253 ~D~~~~~~~~-~~~~~~~~~--------~~~-~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
+|..+|+..- +.+.+++.. ..- +|++++|...-+..++..+++.+.|..||+
T Consensus 242 ~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 242 KDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -TT-----------------------------------------------------------
T ss_pred CCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 9999998753 333333321 112 278899976644333334578888888875
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.66 E-value=5.5e-14 Score=114.51 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=74.0
Q ss_pred ceeeeecC-CCCceEEEEEcCCC---CchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHH
Q 021479 26 AEVLEIEA-DDPKLHVLFVPGNP---GVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDF 101 (312)
Q Consensus 26 ~~~~~~~~-~~~~~~iv~~HG~~---~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 101 (312)
+.+..+.+ ..+.|+||++||++ ++...|..+...++.. .++.|+.+|+|...... ....+ +++.+++++
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~--~g~~Vv~vdYrlape~~----~p~~~-~D~~~a~~~ 141 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASY--SGCTVIGIDYTLSPEAR----FPQAI-EEIVAVCCY 141 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHH--cCCEEEEecCCCCCCCC----CCCcH-HHHHHHHHH
Confidence 33344433 33468999999977 5566677766666653 27999999999653321 11122 333333344
Q ss_pred HHHHhh--cC-CCcEEEEeechHHHHHHHHHHhc------cccceEEEEeccccc
Q 021479 102 IRQELQ--NT-EVPIVLVGHSIGAYVALEMLKRS------SEKVIYYIGLYPFLA 147 (312)
Q Consensus 102 i~~~~~--~~-~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~p~~~ 147 (312)
+.+... +. .++++|+|+|+||.+|+.++... +.++++++++.|...
T Consensus 142 l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 142 FHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 433211 22 34899999999999999998753 357899999988654
No 91
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.66 E-value=3.7e-14 Score=110.73 Aligned_cols=96 Identities=24% Similarity=0.310 Sum_probs=80.8
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcCCC-ccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLGGN-ASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~~~-~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
+|+|+||.+|+...|.+ +++.++.. +.|++++.+|.+.. .....+++++++...+.|... ....|++|+|
T Consensus 2 ~lf~~p~~gG~~~~y~~----la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~--~~~gp~~L~G 72 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRP----LARALPDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRAR--QPEGPYVLAG 72 (229)
T ss_dssp EEEEESSTTCSGGGGHH----HHHHHTTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHH--TSSSSEEEEE
T ss_pred eEEEEcCCccCHHHHHH----HHHhCCCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhh--CCCCCeeehc
Confidence 69999999999999999 77778775 99999999999822 334568999999999999887 4445999999
Q ss_pred echHHHHHHHHHHhcc---ccceEEEEec
Q 021479 118 HSIGAYVALEMLKRSS---EKVIYYIGLY 143 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~p---~~v~~lvl~~ 143 (312)
||+||.+|+++|.+.- ..|..++++.
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 9999999999997654 3588999876
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.65 E-value=5e-15 Score=108.33 Aligned_cols=155 Identities=21% Similarity=0.235 Sum_probs=98.3
Q ss_pred EEEEcCCCCch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 40 VLFVPGNPGVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 40 iv~~HG~~~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
|+++||++++. ..|.+.+. +.+...++|-..|+ ...+.++++..+.+.+... +++++||||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~---~~l~~~~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~----~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLE---RQLENSVRVEQPDW-----------DNPDLDEWVQALDQAIDAI----DEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHH---HHHTTSEEEEEC-------------TS--HHHHHHHHHHCCHC-----TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHH---HhCCCCeEEecccc-----------CCCCHHHHHHHHHHHHhhc----CCCeEEEEe
Confidence 68999999885 45666444 45554577776665 2236778887777766654 457999999
Q ss_pred chHHHHHHHHH-HhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCC
Q 021479 119 SIGAYVALEML-KRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRS 197 (312)
Q Consensus 119 S~Gg~ia~~~a-~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (312)
|+||..++.++ .....+|+|++|++|+........ .+.
T Consensus 63 SLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~---------------------------~~~-------------- 101 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPF---------------------------PPE-------------- 101 (171)
T ss_dssp THHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCC---------------------------TCG--------------
T ss_pred CHHHHHHHHHHhhcccccccEEEEEcCCCcccccch---------------------------hhh--------------
Confidence 99999999999 777789999999998542100000 000
Q ss_pred CchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-e
Q 021479 198 WSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-I 276 (312)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i 276 (312)
+..+. .. ......+|.+++.+++|+++|.+.++.+++.+ +++++ +
T Consensus 102 -----------------------------~~~f~---~~-p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~ 147 (171)
T PF06821_consen 102 -----------------------------LDGFT---PL-PRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIIL 147 (171)
T ss_dssp -----------------------------GCCCT---TS-HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEE
T ss_pred -----------------------------ccccc---cC-cccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEEC
Confidence 00000 00 01233456799999999999999999999987 56677 9
Q ss_pred cCCCccccccc
Q 021479 277 ERHGHTHNFCC 287 (312)
Q Consensus 277 ~~~gH~~~~~~ 287 (312)
+++||+..-+.
T Consensus 148 ~~~GHf~~~~G 158 (171)
T PF06821_consen 148 GGGGHFNAASG 158 (171)
T ss_dssp TS-TTSSGGGT
T ss_pred CCCCCcccccC
Confidence 99999766543
No 93
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.64 E-value=1.3e-15 Score=95.78 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=68.7
Q ss_pred cccceeeeecCCCC-ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHH
Q 021479 23 IYTAEVLEIEADDP-KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDF 101 (312)
Q Consensus 23 g~~~~~~~~~~~~~-~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 101 (312)
|.++.+..|.+.++ +.+|+++||++.++..|..++..|++. ||.|+++|+||||.|........++++.++|+.++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~---G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQ---GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQF 77 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhC---CCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHH
Confidence 45677888888765 999999999999999999977777776 99999999999999987777788999999999987
Q ss_pred HH
Q 021479 102 IR 103 (312)
Q Consensus 102 i~ 103 (312)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 64
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=1e-14 Score=106.96 Aligned_cols=259 Identities=15% Similarity=0.148 Sum_probs=142.0
Q ss_pred ceeeeeccccceeeeecCCCCce-EEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC--CCCCcchH
Q 021479 16 LRLSNVSIYTAEVLEIEADDPKL-HVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD--HGRLFSLD 92 (312)
Q Consensus 16 ~~~~~~~g~~~~~~~~~~~~~~~-~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~--~~~~~~~~ 92 (312)
.....-+|+.+....+...++.+ .|+.-.+.+.-...|++|+...... ||.|..+|+||.|.|... .+..+.+.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~---Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~ 84 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKA---GFEVLTFDYRGIGQSRPASLSGSQWRYL 84 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhcc---CceEEEEecccccCCCccccccCccchh
Confidence 34455688888888888766654 4444445555566788877766665 999999999999999742 22245565
Q ss_pred HHH----HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhh
Q 021479 93 EQV----EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIAS 168 (312)
Q Consensus 93 ~~~----~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 168 (312)
|++ ...++.++.. ....+.+.||||+||.+. .++.+++ +..+..... .... .+........+.....+.
T Consensus 85 DwA~~D~~aal~~~~~~--~~~~P~y~vgHS~GGqa~-gL~~~~~-k~~a~~vfG-~gag--wsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 85 DWARLDFPAALAALKKA--LPGHPLYFVGHSFGGQAL-GLLGQHP-KYAAFAVFG-SGAG--WSGWMGLRERLGAVLLWN 157 (281)
T ss_pred hhhhcchHHHHHHHHhh--CCCCceEEeeccccceee-cccccCc-ccceeeEec-cccc--cccchhhhhcccceeecc
Confidence 544 3334444443 235689999999999854 4444455 344433222 1100 000000001111111111
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEE
Q 021479 169 TALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAF 248 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 248 (312)
.....+.-+...+|..+.. ++...+.....+..++...++ ..++.-..+...+..+.+.+|+++
T Consensus 158 lv~p~lt~w~g~~p~~l~G------~G~d~p~~v~RdW~RwcR~p~----------y~fddp~~~~~~q~yaaVrtPi~~ 221 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLG------LGSDLPGTVMRDWARWCRHPR----------YYFDDPAMRNYRQVYAAVRTPITF 221 (281)
T ss_pred ccccchhhccccCcHhhcC------CCccCcchHHHHHHHHhcCcc----------ccccChhHhHHHHHHHHhcCceee
Confidence 1111111112222322221 011122222222222211111 001111111113567789999999
Q ss_pred EeecCCCCCChhHHHHHHHhCCCCcee---ecC----CCccccccccccchHHHHHHHHHHH
Q 021479 249 LFGVDDHWGPQELYEEISEQVPDVPLA---IER----HGHTHNFCCSEAGSAWVASHVAGLI 303 (312)
Q Consensus 249 i~G~~D~~~~~~~~~~~~~~~~~~~~~---i~~----~gH~~~~~~~~~~~~~v~~~v~~~l 303 (312)
+...+|+++|+...+.+.+..+++.++ ++. -||+-.|-++- +.+.+.+.+|+
T Consensus 222 ~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~---Ealwk~~L~w~ 280 (281)
T COG4757 222 SRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPF---EALWKEMLGWF 280 (281)
T ss_pred eccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccch---HHHHHHHHHhh
Confidence 999999999999999999999998766 333 58998888652 46666666665
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.63 E-value=1.9e-15 Score=119.94 Aligned_cols=110 Identities=17% Similarity=0.136 Sum_probs=77.3
Q ss_pred CCCceEEEEEcCCCCch-hcHHH-HHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc---
Q 021479 34 DDPKLHVLFVPGNPGVI-TFYKD-FVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN--- 108 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~-~~~~~-~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 108 (312)
+..+|++|++||++++. ..|.. +...+.. ..+++|+++|++|++.+. ......++....+++.++++.+...
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~--~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLS--RGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHh--cCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 44578899999999887 55543 2222222 237999999999984332 1112234445556666666664321
Q ss_pred CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
..++++||||||||.+|..++..+|++|++++++.|..
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 22479999999999999999999999999999998754
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.63 E-value=6.8e-14 Score=99.84 Aligned_cols=185 Identities=15% Similarity=0.181 Sum_probs=121.8
Q ss_pred cceeeeecCC-CCceEEEEEcCCC---Cc--hhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHH
Q 021479 25 TAEVLEIEAD-DPKLHVLFVPGNP---GV--ITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHK 98 (312)
Q Consensus 25 ~~~~~~~~~~-~~~~~iv~~HG~~---~~--~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 98 (312)
+++..+..+. ...|..|.+|-.+ |+ ...-..++..+.+. ||.++.+|+||-|+|.+.-..-..=.+++..+
T Consensus 15 ~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~---G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aa 91 (210)
T COG2945 15 RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKR---GFATLRFNFRGVGRSQGEFDNGIGELEDAAAA 91 (210)
T ss_pred cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhC---CceEEeecccccccccCcccCCcchHHHHHHH
Confidence 4444444443 5578888888533 22 22233334444444 99999999999999975444434445677778
Q ss_pred HHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHh
Q 021479 99 MDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASL 178 (312)
Q Consensus 99 ~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (312)
+++++...+... -+.|.|+|+|++|++.+|.+.|+ ....+.+.|.+.
T Consensus 92 ldW~~~~hp~s~-~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~------------------------------- 138 (210)
T COG2945 92 LDWLQARHPDSA-SCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN------------------------------- 138 (210)
T ss_pred HHHHHhhCCCch-hhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC-------------------------------
Confidence 888888844222 24789999999999999999986 344443333211
Q ss_pred cCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCC
Q 021479 179 GILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGP 258 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 258 (312)
..+...+....+|.++|+|+.|.+++
T Consensus 139 ------------------------------------------------------~~dfs~l~P~P~~~lvi~g~~Ddvv~ 164 (210)
T COG2945 139 ------------------------------------------------------AYDFSFLAPCPSPGLVIQGDADDVVD 164 (210)
T ss_pred ------------------------------------------------------chhhhhccCCCCCceeEecChhhhhc
Confidence 00011122346799999999999999
Q ss_pred hhHHHHHHHhCCCCceeecCCCccccccccccchHHHHHHHHHHHH
Q 021479 259 QELYEEISEQVPDVPLAIERHGHTHNFCCSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 259 ~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~ 304 (312)
.....+..+..+-..+++++++|+-+-- ...+.+.+.+|+.
T Consensus 165 l~~~l~~~~~~~~~~i~i~~a~HFF~gK-----l~~l~~~i~~~l~ 205 (210)
T COG2945 165 LVAVLKWQESIKITVITIPGADHFFHGK-----LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHhhcCCCCceEEecCCCceeccc-----HHHHHHHHHHHhh
Confidence 9888888877444444489999964422 3478888888885
No 97
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.61 E-value=5.6e-13 Score=107.52 Aligned_cols=215 Identities=16% Similarity=0.108 Sum_probs=112.4
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC---------C----------CCCcchHHH
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD---------H----------GRLFSLDEQ 94 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~---------~----------~~~~~~~~~ 94 (312)
.++.|.||.+||.++....|...+. ++. .||.|+.+|.||+|..... . ...+-+...
T Consensus 80 ~~~~Pavv~~hGyg~~~~~~~~~~~-~a~---~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSGDPFDLLP-WAA---AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp SSSEEEEEEE--TT--GGGHHHHHH-HHH---TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred CCCcCEEEEecCCCCCCCCcccccc-ccc---CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 4557899999999998777765322 333 3999999999999932100 0 111112334
Q ss_pred HHHHHHHHHHHhh--c-CCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHH
Q 021479 95 VEHKMDFIRQELQ--N-TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTAL 171 (312)
Q Consensus 95 ~~~~~~~i~~~~~--~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (312)
+.|+...++.+.. + ..+++.+.|.|.||.+++.+|+..+ +|++++...|+++..... .
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~------------------~ 216 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA------------------L 216 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH------------------H
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh------------------h
Confidence 4566555555421 1 1358999999999999999999876 699999888866421100 0
Q ss_pred HHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCcEEEEe
Q 021479 172 SYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSKIAFLF 250 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~ 250 (312)
. ......+-.-...+++..-.. .+..... +..+. ..|. ...+.|+||+++-.
T Consensus 217 ~---~~~~~~~y~~~~~~~~~~d~~---~~~~~~v--------------------~~~L~-Y~D~~nfA~ri~~pvl~~~ 269 (320)
T PF05448_consen 217 E---LRADEGPYPEIRRYFRWRDPH---HEREPEV--------------------FETLS-YFDAVNFARRIKCPVLFSV 269 (320)
T ss_dssp H---HT--STTTHHHHHHHHHHSCT---HCHHHHH--------------------HHHHH-TT-HHHHGGG--SEEEEEE
T ss_pred h---cCCccccHHHHHHHHhccCCC---cccHHHH--------------------HHHHh-hhhHHHHHHHcCCCEEEEE
Confidence 0 000000100011111100000 0000000 11111 1233 45678999999999
Q ss_pred ecCCCCCChhHHHHHHHhCCC-Ccee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 251 GVDDHWGPQELYEEISEQVPD-VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 251 G~~D~~~~~~~~~~~~~~~~~-~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
|-.|.++||.......+.++. .++. .+..||...-+ .-.+...+||++
T Consensus 270 gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~~~~~~~l~~ 319 (320)
T PF05448_consen 270 GLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQEDKQLNFLKE 319 (320)
T ss_dssp ETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHHHHHHHHHHH
T ss_pred ecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHHHHHHHHHhc
Confidence 999999999999999988875 4566 88899944322 224566677765
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.58 E-value=7e-14 Score=109.55 Aligned_cols=120 Identities=12% Similarity=0.137 Sum_probs=97.8
Q ss_pred eeeccccceeeeecCC-----CCceEEEEEcCCCCchhcHHHHHHHHHHHc--C--C--CccEEEeccCCCccCccCCCC
Q 021479 19 SNVSIYTAEVLEIEAD-----DPKLHVLFVPGNPGVITFYKDFVQSLYEHL--G--G--NASISAIGSAAQTKKNYDHGR 87 (312)
Q Consensus 19 ~~~~g~~~~~~~~~~~-----~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l--~--~--~~~vi~~D~~G~G~s~~~~~~ 87 (312)
.++.|.++++++..+. +...+|+++||++|+-..|-.++..|.+.- + . -|.||++.+||+|-|+.+...
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 4678999999998763 223579999999999999888666665541 1 1 389999999999999966666
Q ss_pred CcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEE
Q 021479 88 LFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIG 141 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 141 (312)
.++-.+.+.-+..++-.+ +.+ ++++=|-.||+.|+..+|..+|++|.|+-+
T Consensus 209 GFn~~a~ArvmrkLMlRL--g~n-kffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 209 GFNAAATARVMRKLMLRL--GYN-KFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred CccHHHHHHHHHHHHHHh--Ccc-eeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 777778888888877777 555 899999999999999999999999988765
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.58 E-value=9.5e-14 Score=121.53 Aligned_cols=121 Identities=7% Similarity=-0.071 Sum_probs=83.1
Q ss_pred ccccceeeeecC--CCCceEEEEEcCCCCchh---cH-HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHH
Q 021479 22 SIYTAEVLEIEA--DDPKLHVLFVPGNPGVIT---FY-KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQV 95 (312)
Q Consensus 22 ~g~~~~~~~~~~--~~~~~~iv~~HG~~~~~~---~~-~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 95 (312)
+|.++....+.+ .++.|+||++||++.+.. .+ ......+++. ||.|+++|+||+|.|..... ..+ .+.+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~---Gy~vv~~D~RG~g~S~g~~~-~~~-~~~~ 79 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ---GYAVVIQDTRGRGASEGEFD-LLG-SDEA 79 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhC---CcEEEEEeccccccCCCceE-ecC-cccc
Confidence 555665444433 346789999999987653 11 1222334444 99999999999999974322 222 4455
Q ss_pred HHHHHHHHHHhh--cCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 96 EHKMDFIRQELQ--NTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 96 ~~~~~~i~~~~~--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
+|+.++|+.+.. ..+.++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 555555555421 1235899999999999999999999999999998776543
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.56 E-value=5.4e-14 Score=123.75 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=86.7
Q ss_pred cccceeeeeccccceeeeecCC--------CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC
Q 021479 13 SVNLRLSNVSIYTAEVLEIEAD--------DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD 84 (312)
Q Consensus 13 ~~~~~~~~~~g~~~~~~~~~~~--------~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~ 84 (312)
.++.++...++.++.++..+.. .+.|+|||+||++++...|..+...+.+. +|+|+++|+||||.|...
T Consensus 417 ~vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~---Gy~VIaiDlpGHG~S~~~ 493 (792)
T TIGR03502 417 NVPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAA---GVATIAIDHPLHGARSFD 493 (792)
T ss_pred ccceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhC---CcEEEEeCCCCCCccccc
Confidence 4566677777777666654332 22468999999999999999965555544 899999999999999432
Q ss_pred ---------CCCC-------------cchHHHHHHHHHHHHHHh------h-------cCCCcEEEEeechHHHHHHHHH
Q 021479 85 ---------HGRL-------------FSLDEQVEHKMDFIRQEL------Q-------NTEVPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 85 ---------~~~~-------------~~~~~~~~~~~~~i~~~~------~-------~~~~~~~lvGhS~Gg~ia~~~a 129 (312)
.... .++++.+.|+..+...+. . ....+++++||||||.++..++
T Consensus 494 ~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 494 ANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred cccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 1111 277889999988887763 0 1134899999999999999999
Q ss_pred Hhc
Q 021479 130 KRS 132 (312)
Q Consensus 130 ~~~ 132 (312)
...
T Consensus 574 ~~a 576 (792)
T TIGR03502 574 AYA 576 (792)
T ss_pred Hhc
Confidence 753
No 101
>COG0400 Predicted esterase [General function prediction only]
Probab=99.54 E-value=5.4e-13 Score=99.83 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=69.6
Q ss_pred ecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccC--CCccC---ccCCCCCcchHH---HHHHHHHHH
Q 021479 31 IEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSA--AQTKK---NYDHGRLFSLDE---QVEHKMDFI 102 (312)
Q Consensus 31 ~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~--G~G~s---~~~~~~~~~~~~---~~~~~~~~i 102 (312)
.+.+...|+||++||.|++...+.+ +...+..++.++.+-=+ -.|.- .+.....++.++ ..+.+.+++
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~----~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVP----LPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhh----hhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 3344557789999999999888777 44444445666655211 01100 001112233333 333333444
Q ss_pred HHHhh--cC-CCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 103 RQELQ--NT-EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 103 ~~~~~--~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
+.... ++ .++++++|+|-||++++....++|+.++++++.+|+.
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 33211 22 3489999999999999999999999999999888644
No 102
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.50 E-value=3.4e-12 Score=104.65 Aligned_cols=288 Identities=15% Similarity=0.089 Sum_probs=153.1
Q ss_pred ccceee-eeccccceeeeecCC-CCceEEEEEcCCCCchhcHH------HHHHHHHHHcCCCccEEEeccCCCccCcc--
Q 021479 14 VNLRLS-NVSIYTAEVLEIEAD-DPKLHVLFVPGNPGVITFYK------DFVQSLYEHLGGNASISAIGSAAQTKKNY-- 83 (312)
Q Consensus 14 ~~~~~~-~~~g~~~~~~~~~~~-~~~~~iv~~HG~~~~~~~~~------~~~~~l~~~l~~~~~vi~~D~~G~G~s~~-- 83 (312)
++...+ +.+|+-+....++.. +++|+|++.||...++..|- .+.-.+++. ||+|+.-+.||...|..
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lada---GYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADA---GYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHc---CCceeeecCcCcccchhhc
Confidence 344433 345554344444433 77899999999999988883 333444455 99999999999887742
Q ss_pred --CC-----CCCcchHHHHH-HHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHhccc---cceEEEEecccccccCC
Q 021479 84 --DH-----GRLFSLDEQVE-HKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKRSSE---KVIYYIGLYPFLALIRP 151 (312)
Q Consensus 84 --~~-----~~~~~~~~~~~-~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~ 151 (312)
.+ -..+++++++. |+-+.|+..+. ...++++.+|||.|+.+...++...|+ +|+.+++++|.......
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~ 204 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHI 204 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhccc
Confidence 11 11346666332 34444443221 234689999999999999999998875 79999999997633211
Q ss_pred CCc-ccccchh-hhhhhh------------hHHHHHHHHHhcC---CcHHHHHHHHHcccCCCCchhHHHH-----HHhh
Q 021479 152 SVT-QSIIGRV-AASNIA------------STALSYIIASLGI---LPSKALRFLVSNSLGRSWSATAVEA-----ACTH 209 (312)
Q Consensus 152 ~~~-~~~~~~~-~~~~~~------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 209 (312)
... ....... .....+ ..+...+...... ....+...++....+. ....... ....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~--~~~~~n~~~~~~~~~h 282 (403)
T KOG2624|consen 205 KSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGW--NSNNWNTTLLPVYLAH 282 (403)
T ss_pred ccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCc--chHhhhhcccchhhcc
Confidence 110 0000000 000000 0000001110100 1111111111111111 1111111 1111
Q ss_pred ccchhHHHHHHHHHHH----HHh-----------hhcC-CCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc
Q 021479 210 LSQYHVMRNVLFMTMT----EFK-----------QLKN-TPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP 273 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~----~~~-----------~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 273 (312)
.......++..++..- .+. .... .+..-.+.++++|+.+.+|++|.++.++..+.+....+++.
T Consensus 283 ~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~ 362 (403)
T KOG2624|consen 283 LPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSV 362 (403)
T ss_pred CCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccc
Confidence 1111222333333210 000 0000 01112456789999999999999999999998887777654
Q ss_pred e---e-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 274 L---A-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 274 ~---~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
+ . +++-.|.-++-. ....++|.+.|.+.++...
T Consensus 363 ~~~~~~~~~ynHlDFi~g-~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWG-LDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccccCCCccceeeeec-cCcHHHHHHHHHHHHHhhh
Confidence 3 2 577788666554 4556678888877777543
No 103
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.48 E-value=7.4e-12 Score=96.91 Aligned_cols=183 Identities=15% Similarity=0.089 Sum_probs=125.5
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCC-ccCccCCCC----------CcchHHHHHHHHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQ-TKKNYDHGR----------LFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~-G~s~~~~~~----------~~~~~~~~~~~~~~i~~~ 105 (312)
.|.||++|++.|-....+.+...++.. ||.|+++|+-+. |.+...... ..+..+...|+...++.+
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~---Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L 103 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKA---GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYL 103 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhC---CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHH
Confidence 389999999999888999977777777 999999998863 333211100 012245666666666665
Q ss_pred hhcC---CCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCc
Q 021479 106 LQNT---EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILP 182 (312)
Q Consensus 106 ~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (312)
.... ..++.++|+||||.+++.++.+.| .|++.+..-|...
T Consensus 104 ~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~----------------------------------- 147 (236)
T COG0412 104 ARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI----------------------------------- 147 (236)
T ss_pred HhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC-----------------------------------
Confidence 3222 357999999999999999999988 6888885433110
Q ss_pred HHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHH
Q 021479 183 SKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELY 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 262 (312)
. .......++++|+++++|+.|..+|....
T Consensus 148 ------------------------------------------------~--~~~~~~~~~~~pvl~~~~~~D~~~p~~~~ 177 (236)
T COG0412 148 ------------------------------------------------A--DDTADAPKIKVPVLLHLAGEDPYIPAADV 177 (236)
T ss_pred ------------------------------------------------C--CcccccccccCcEEEEecccCCCCChhHH
Confidence 0 00001246899999999999999999988
Q ss_pred HHHHHhCC----CCcee-ecCCCcccccc-------ccccchHHHHHHHHHHHHhhcc
Q 021479 263 EEISEQVP----DVPLA-IERHGHTHNFC-------CSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 263 ~~~~~~~~----~~~~~-i~~~gH~~~~~-------~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
..+.+.+. ..+++ ++++.|.-+-. ......+.-.+.+.+|+++.+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 178 DALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 77777553 34556 66766754422 1234456677888889887653
No 104
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.47 E-value=1.4e-12 Score=98.21 Aligned_cols=211 Identities=13% Similarity=0.113 Sum_probs=127.7
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCcc----CCC----------------CCcchHHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNY----DHG----------------RLFSLDEQ 94 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~----~~~----------------~~~~~~~~ 94 (312)
++.|.||-.||.++....|.. +...-..||.|+.+|-||.|.|+. .+. +.+-+...
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~----~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v 156 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHD----MLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGV 156 (321)
T ss_pred CccceEEEEeeccCCCCCccc----cccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeee
Confidence 567899999999999988877 333334499999999999998832 111 11112233
Q ss_pred HHHHHHHHHHH---hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHH
Q 021479 95 VEHKMDFIRQE---LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTAL 171 (312)
Q Consensus 95 ~~~~~~~i~~~---~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (312)
..|+...++.+ .+-..+++.+.|.|.||.+++..++..| ++++++..-|+++.-.... .-.. ..
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i-----~~~~-~~------ 223 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAI-----ELAT-EG------ 223 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhhe-----eecc-cC------
Confidence 44555555543 2223458999999999999999998776 6999998888775322110 0000 00
Q ss_pred HHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCCh-hhhhhcCCcEEEEe
Q 021479 172 SYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDW-AFMRENQSKIAFLF 250 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~ 250 (312)
+-.-...+++. ....+..+ +..+. ..|. ....++++|+|+..
T Consensus 224 ----------~ydei~~y~k~---h~~~e~~v-----------------------~~TL~-yfD~~n~A~RiK~pvL~sv 266 (321)
T COG3458 224 ----------PYDEIQTYFKR---HDPKEAEV-----------------------FETLS-YFDIVNLAARIKVPVLMSV 266 (321)
T ss_pred ----------cHHHHHHHHHh---cCchHHHH-----------------------HHHHh-hhhhhhHHHhhccceEEee
Confidence 00000111111 00000011 11111 1222 34568999999999
Q ss_pred ecCCCCCChhHHHHHHHhCCCCc-ee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 251 GVDDHWGPQELYEEISEQVPDVP-LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 251 G~~D~~~~~~~~~~~~~~~~~~~-~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
|--|+++||.-.-...+.++..+ ++ .+.-+|.- .| .-..+.+..|++..
T Consensus 267 gL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~---~p----~~~~~~~~~~l~~l 317 (321)
T COG3458 267 GLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG---GP----GFQSRQQVHFLKIL 317 (321)
T ss_pred cccCCCCCChhhHHHhhcccCCceEEEeecccccc---Cc----chhHHHHHHHHHhh
Confidence 99999999999999998887755 44 66666732 22 23345566666654
No 105
>PRK10115 protease 2; Provisional
Probab=99.45 E-value=7e-12 Score=111.75 Aligned_cols=126 Identities=11% Similarity=0.090 Sum_probs=86.4
Q ss_pred eeeecccccee-eeecC----CCCceEEEEEcCCCCchh--cHHHHHHHHHHHcCCCccEEEeccCCCccCc---cC---
Q 021479 18 LSNVSIYTAEV-LEIEA----DDPKLHVLFVPGNPGVIT--FYKDFVQSLYEHLGGNASISAIGSAAQTKKN---YD--- 84 (312)
Q Consensus 18 ~~~~~g~~~~~-~~~~~----~~~~~~iv~~HG~~~~~~--~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~---~~--- 84 (312)
+..-+|.++.+ +.+.+ .++.|+||++||.++... .|......++++ ||.|+.++.||-|.-. ..
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r---G~~v~~~n~RGs~g~G~~w~~~g~ 497 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR---GFVYAIVHVRGGGELGQQWYEDGK 497 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC---CcEEEEEEcCCCCccCHHHHHhhh
Confidence 34457777664 33322 345799999999887663 355555555555 9999999999765431 11
Q ss_pred -CCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 85 -HGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 85 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
.....+++|.++.+..+++.-+. ...++.+.|-|.||.++...+.++|++++++|...|++.
T Consensus 498 ~~~k~~~~~D~~a~~~~Lv~~g~~-d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 498 FLKKKNTFNDYLDACDALLKLGYG-SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred hhcCCCcHHHHHHHHHHHHHcCCC-ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 11234555555555444444221 235899999999999999999999999999998887654
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.44 E-value=1.9e-11 Score=90.42 Aligned_cols=90 Identities=16% Similarity=0.273 Sum_probs=61.8
Q ss_pred EEEEcCCCCchhcHHH-HHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 40 VLFVPGNPGVITFYKD-FVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~-~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
|+++||+.+++...+. .+....+......+++++|++- ...+.++.+.+.|+.. ..+.+.|||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~------------~p~~a~~~l~~~i~~~---~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP------------FPEEAIAQLEQLIEEL---KPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc------------CHHHHHHHHHHHHHhC---CCCCeEEEEE
Confidence 7999999998877543 1122222222245666666542 3566667777777776 2335999999
Q ss_pred chHHHHHHHHHHhccccceEEEEeccccc
Q 021479 119 SIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 119 S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
||||..|..+|.+++ ++. ||++|.+.
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 999999999999886 444 88998663
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.42 E-value=1.3e-11 Score=119.52 Aligned_cols=99 Identities=22% Similarity=0.191 Sum_probs=84.7
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
+++++|+||++++...|.. +.+.|..+++|+++|++|+|.+. ...++++++++++.+.++.. ....+++++
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~----l~~~l~~~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~--~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSV----LSRYLDPQWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQ--QPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCchHHHHH----HHHhcCCCCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhh--CCCCCEEEE
Confidence 4679999999999999998 77778778999999999998652 34579999999999999886 445589999
Q ss_pred eechHHHHHHHHHHh---ccccceEEEEecc
Q 021479 117 GHSIGAYVALEMLKR---SSEKVIYYIGLYP 144 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~---~p~~v~~lvl~~p 144 (312)
||||||.+|.++|.+ .++++..++++.+
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 999999999999986 4678999998774
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.41 E-value=4.5e-11 Score=95.57 Aligned_cols=111 Identities=9% Similarity=0.083 Sum_probs=71.4
Q ss_pred CCCCceEEEEEcCCCCchhcHHHHH----------HHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHH---HHH
Q 021479 33 ADDPKLHVLFVPGNPGVITFYKDFV----------QSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVE---HKM 99 (312)
Q Consensus 33 ~~~~~~~iv~~HG~~~~~~~~~~~~----------~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~---~~~ 99 (312)
..++.|+||..|+.+.....-.... ..+++. ||.|+..|.||.|.|.+..... ..+.++ +++
T Consensus 16 ~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~---GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I 90 (272)
T PF02129_consen 16 GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER---GYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTI 90 (272)
T ss_dssp TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT---T-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHH
T ss_pred CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC---CCEEEEECCcccccCCCccccC--ChhHHHHHHHHH
Confidence 3566899999999886431111111 014444 9999999999999997543331 344444 455
Q ss_pred HHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccccc
Q 021479 100 DFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALI 149 (312)
Q Consensus 100 ~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~ 149 (312)
+++... +-.+.+|.++|.|++|..++..|+..|..+++++...+..+..
T Consensus 91 ~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 91 EWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred HHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 555543 2234589999999999999999998888999999877654433
No 109
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.40 E-value=2.4e-12 Score=92.83 Aligned_cols=196 Identities=13% Similarity=0.042 Sum_probs=124.4
Q ss_pred ccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHH
Q 021479 22 SIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDF 101 (312)
Q Consensus 22 ~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~ 101 (312)
.+....+-.|++....+.+||+||.......-+..+...-..++.||+|..++ ++.+. ...++++.+.++...
T Consensus 52 ~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~----q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 52 EGGRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCP----QVHTLEQTMTQFTHG 124 (270)
T ss_pred CCCceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCc----ccccHHHHHHHHHHH
Confidence 34467788888877788999999965433332333333444455599999875 45553 334677777666655
Q ss_pred HHH---HhhcCCCcEEEEeechHHHHHHHHHHhc-cccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHH
Q 021479 102 IRQ---ELQNTEVPIVLVGHSIGAYVALEMLKRS-SEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIAS 177 (312)
Q Consensus 102 i~~---~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (312)
++. +.++. +.+.+-|||.|+.+|+....+. ..+|.|++|++.... +..+..
T Consensus 125 v~filk~~~n~-k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~-------------------l~EL~~----- 179 (270)
T KOG4627|consen 125 VNFILKYTENT-KVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD-------------------LRELSN----- 179 (270)
T ss_pred HHHHHHhcccc-eeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh-------------------HHHHhC-----
Confidence 544 33333 3688889999999999877654 357999998775332 011000
Q ss_pred hcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCC
Q 021479 178 LGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWG 257 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 257 (312)
...... +.+...+.. .. ..+...+..++.|++++.|+.|.--
T Consensus 180 --------------te~g~d----------------------lgLt~~~ae-~~-Scdl~~~~~v~~~ilVv~~~~espk 221 (270)
T KOG4627|consen 180 --------------TESGND----------------------LGLTERNAE-SV-SCDLWEYTDVTVWILVVAAEHESPK 221 (270)
T ss_pred --------------Cccccc----------------------cCcccchhh-hc-CccHHHhcCceeeeeEeeecccCcH
Confidence 000000 000000000 11 1455667788999999999999766
Q ss_pred ChhHHHHHHHhCCCCcee-ecCCCccccccc
Q 021479 258 PQELYEEISEQVPDVPLA-IERHGHTHNFCC 287 (312)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~ 287 (312)
-.+..++++.....+.++ +++.+|+-.++.
T Consensus 222 lieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 222 LIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 667778888888889999 999999877774
No 110
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=9.3e-11 Score=90.66 Aligned_cols=98 Identities=23% Similarity=0.269 Sum_probs=82.7
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
++|+++||.+|....|.+ |...+.+...|+.++.||.|.- .....+++++++..++.|... +...|++|+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~----L~~~l~~~~~v~~l~a~g~~~~---~~~~~~l~~~a~~yv~~Ir~~--QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAP----LAAALGPLLPVYGLQAPGYGAG---EQPFASLDDMAAAYVAAIRRV--QPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHHHHHH----HHHHhccCceeeccccCccccc---ccccCCHHHHHHHHHHHHHHh--CCCCCEEEEe
Confidence 469999999999999999 6666777799999999999853 234568999999999999998 6677999999
Q ss_pred echHHHHHHHHHHhcc---ccceEEEEecc
Q 021479 118 HSIGAYVALEMLKRSS---EKVIYYIGLYP 144 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~p---~~v~~lvl~~p 144 (312)
||+||.+|...|.+.- +.|..++++.+
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~ 101 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDA 101 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 9999999999997644 46888888764
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.37 E-value=1.1e-10 Score=82.65 Aligned_cols=155 Identities=17% Similarity=0.148 Sum_probs=104.3
Q ss_pred eEEEEEcCCCCch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEE
Q 021479 38 LHVLFVPGNPGVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 38 ~~iv~~HG~~~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lv 116 (312)
+.+|.+||+.++. .+|...+ ...+.. +-.+++ .......++++++.+.+.+... .++++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~w---e~~l~~---a~rveq--------~~w~~P~~~dWi~~l~~~v~a~----~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRW---ESALPN---ARRVEQ--------DDWEAPVLDDWIARLEKEVNAA----EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHHHH---HhhCcc---chhccc--------CCCCCCCHHHHHHHHHHHHhcc----CCCeEEE
Confidence 4589999988775 4566532 223331 222222 2333457899999998888886 3479999
Q ss_pred eechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCC
Q 021479 117 GHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGR 196 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (312)
+||+|+.+++.++.+...+|+|+.|++|+-...+... +..
T Consensus 65 AHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~----------------------------~~~------------ 104 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR----------------------------PKH------------ 104 (181)
T ss_pred EecccHHHHHHHHHhhhhccceEEEecCCCccccccc----------------------------hhh------------
Confidence 9999999999999888889999999997431100000 000
Q ss_pred CCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCceee
Q 021479 197 SWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLAI 276 (312)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~i 276 (312)
. +. .+........-|.+++.+++|++++.+.++.+++..++.-+.+
T Consensus 105 ------------------------------~--~t--f~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~~ 150 (181)
T COG3545 105 ------------------------------L--MT--FDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVDV 150 (181)
T ss_pred ------------------------------c--cc--cCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhheec
Confidence 0 00 0101112345599999999999999999999999887665558
Q ss_pred cCCCcccc
Q 021479 277 ERHGHTHN 284 (312)
Q Consensus 277 ~~~gH~~~ 284 (312)
.++||..-
T Consensus 151 g~~GHiN~ 158 (181)
T COG3545 151 GEGGHINA 158 (181)
T ss_pred ccccccch
Confidence 88888544
No 112
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.36 E-value=6e-11 Score=95.51 Aligned_cols=238 Identities=15% Similarity=0.102 Sum_probs=133.2
Q ss_pred ceEEEEEcCCCCchhcH-----HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHH-HHHHHHHHHHhh-cC
Q 021479 37 KLHVLFVPGNPGVITFY-----KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQV-EHKMDFIRQELQ-NT 109 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~-----~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~-~~~~~~i~~~~~-~~ 109 (312)
+.+++++|-+-.....+ +.++..+.+. |+.|+.+|+++=..+.. ..++++++ +.+.+.++...+ ..
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~---g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg 179 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQ---GLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITG 179 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHc---CCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhC
Confidence 56789999876554443 4556666666 99999999987766642 45677777 555555544321 23
Q ss_pred CCcEEEEeechHHHHHHHHHHhcccc-ceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHH-
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRSSEK-VIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALR- 187 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (312)
.+++.++|||.||.++..+++.++.+ |++++++...++............. ..+..+.... .....+|.....
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~----~~~~~~~~~i-~~~g~lpg~~ma~ 254 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANE----ATIEALDADI-VQKGILPGWYMAI 254 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCH----HHHHHHHhhh-hhccCCChHHHHH
Confidence 35899999999999999999988877 9999987644554443332211111 0011111000 001122222221
Q ss_pred -------------HHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHH--HHHHh--hhcC-C----CChhhhhhcCCc
Q 021479 188 -------------FLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMT--MTEFK--QLKN-T----PDWAFMRENQSK 245 (312)
Q Consensus 188 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~-~----~~~~~l~~i~~P 245 (312)
.+++.++..+.+.. .+...+..+...+....+.. .+.+. .+.. . ...-.+.+|+||
T Consensus 255 ~F~mLrpndliw~~fV~nyl~ge~pl~--fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~p 332 (445)
T COG3243 255 VFFLLRPNDLIWNYFVNNYLDGEQPLP--FDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCP 332 (445)
T ss_pred HHHhcCccccchHHHHHHhcCCCCCCc--hhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccc
Confidence 22222221111111 11111111111111111100 00000 0110 0 012357899999
Q ss_pred EEEEeecCCCCCChhHHHHHHHhCCC-CceeecCCCcccccccc
Q 021479 246 IAFLFGVDDHWGPQELYEEISEQVPD-VPLAIERHGHTHNFCCS 288 (312)
Q Consensus 246 ~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~~~~ 288 (312)
++++.|++|+++|.+......+.+++ +++++-++||......|
T Consensus 333 vy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 333 VYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNP 376 (445)
T ss_pred eEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCC
Confidence 99999999999999999999999888 44446789998887763
No 113
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.34 E-value=1.8e-11 Score=94.01 Aligned_cols=103 Identities=23% Similarity=0.304 Sum_probs=67.9
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHH-----cCCCccEEEeccCCCccCccCCCCCcchHHHHHHHH---HHHHHHh--
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEH-----LGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKM---DFIRQEL-- 106 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~-----l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~---~~i~~~~-- 106 (312)
+.+||||||..|+...++.+.....+. ....++++++|+......- . ...+.+..+.+. +.+...+
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~--g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--H--GRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc--c--cccHHHHHHHHHHHHHHHHHhhhh
Confidence 567999999999999888866665222 1235889999987653221 1 123333333333 3333322
Q ss_pred -hcCCCcEEEEeechHHHHHHHHHHhcc---ccceEEEEec
Q 021479 107 -QNTEVPIVLVGHSIGAYVALEMLKRSS---EKVIYYIGLY 143 (312)
Q Consensus 107 -~~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~ 143 (312)
....++++||||||||.+|-.++...+ +.|+++|.++
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 124568999999999999988886544 4699999776
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.32 E-value=5.2e-11 Score=91.69 Aligned_cols=98 Identities=21% Similarity=0.204 Sum_probs=64.2
Q ss_pred EEEEcCCCC---chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc------CC
Q 021479 40 VLFVPGNPG---VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN------TE 110 (312)
Q Consensus 40 iv~~HG~~~---~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~ 110 (312)
||++||++. +......+...++.. .++.|+.+|+|=.. ..++.+.++|+.+.++.+..+ ..
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~--~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE--RGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH--HTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh--ccEEEEEeeccccc--------cccccccccccccceeeeccccccccccc
Confidence 799999763 445556666666652 28999999998321 234555555555555544322 13
Q ss_pred CcEEEEeechHHHHHHHHHHhccc----cceEEEEeccccc
Q 021479 111 VPIVLVGHSIGAYVALEMLKRSSE----KVIYYIGLYPFLA 147 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~ 147 (312)
++++|+|+|.||.+|+.++....+ .++++++++|...
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cceEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 489999999999999999976554 3899999998543
No 115
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.32 E-value=5.6e-10 Score=95.04 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=79.3
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHH-----------HHHH---HcCCCccEEEeccC-CCccCccCCCC-CcchHHHHHH
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQ-----------SLYE---HLGGNASISAIGSA-AQTKKNYDHGR-LFSLDEQVEH 97 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~-----------~l~~---~l~~~~~vi~~D~~-G~G~s~~~~~~-~~~~~~~~~~ 97 (312)
+.+.|+||+++|++|++..+--|.+ .+.. ...+..+++.+|.| |+|.|...... ..+.++.++|
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 3457999999999999876533110 0000 01235899999986 88888633222 3456788899
Q ss_pred HHHHHHHHhh---c-CCCcEEEEeechHHHHHHHHHHhc----------cccceEEEEeccccccc
Q 021479 98 KMDFIRQELQ---N-TEVPIVLVGHSIGAYVALEMLKRS----------SEKVIYYIGLYPFLALI 149 (312)
Q Consensus 98 ~~~~i~~~~~---~-~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~p~~~~~ 149 (312)
+.++++..+. . ...+++|+|||+||..+-.+|.+. .-.++|+++-+|++++.
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 9998886531 1 235899999999999998887652 12578999888766543
No 116
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.30 E-value=8.5e-10 Score=76.56 Aligned_cols=189 Identities=13% Similarity=0.095 Sum_probs=120.2
Q ss_pred cCCCCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEeccCCCccC-----ccCCCCCcchHHHHHHHHHHHHHH
Q 021479 32 EADDPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGSAAQTKK-----NYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 32 ~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~~G~G~s-----~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
+......+||+.||.+.+.+. +++...+..| ..|+.|..++++-.-.. .+++....-...++..+.++...+
T Consensus 9 pag~~~~tilLaHGAGasmdS--t~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l 86 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDS--TSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL 86 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCC--HHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc
Confidence 334456789999999987765 4444455555 34899999998743221 112233333456777777777666
Q ss_pred hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHH
Q 021479 106 LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKA 185 (312)
Q Consensus 106 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (312)
...|.++-|+||||-++...+......|.++++++-.+.+... |+.
T Consensus 87 ---~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK------------------------------Pe~- 132 (213)
T COG3571 87 ---AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK------------------------------PEQ- 132 (213)
T ss_pred ---cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCC------------------------------ccc-
Confidence 2348999999999999999998776679999987611110000 000
Q ss_pred HHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHH
Q 021479 186 LRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEI 265 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 265 (312)
+ .-+.|..++.|++|.+|+.|.+=..+....
T Consensus 133 --------------------------------------------~----Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~- 163 (213)
T COG3571 133 --------------------------------------------L----RTEHLTGLKTPTLITQGTRDEFGTRDEVAG- 163 (213)
T ss_pred --------------------------------------------c----hhhhccCCCCCeEEeecccccccCHHHHHh-
Confidence 0 012345678899999999999876664432
Q ss_pred HHhCCCCcee-ecCCCccccccc------cccchHHHHHHHHHHHHh
Q 021479 266 SEQVPDVPLA-IERHGHTHNFCC------SEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 266 ~~~~~~~~~~-i~~~gH~~~~~~------~~~~~~~v~~~v~~~l~~ 305 (312)
....+..+++ ++++.|..---+ -++.-...++.|+.|...
T Consensus 164 y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 164 YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 2233567777 888888542211 122334677778888764
No 117
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.30 E-value=3.5e-11 Score=92.10 Aligned_cols=166 Identities=16% Similarity=0.132 Sum_probs=93.6
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCC-CccEEEeccC-----CCccCc------------------cCC----CC
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGG-NASISAIGSA-----AQTKKN------------------YDH----GR 87 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~-~~~vi~~D~~-----G~G~s~------------------~~~----~~ 87 (312)
.++.|||+||++.++..++.....+.+.|.+ +++++.+|-| +-|... ... ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4677999999999999999989999999987 8999998855 121110 001 11
Q ss_pred CcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc--------ccceEEEEecccccccCCCCcccccc
Q 021479 88 LFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS--------EKVIYYIGLYPFLALIRPSVTQSIIG 159 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p--------~~v~~lvl~~p~~~~~~~~~~~~~~~ 159 (312)
...+++.++.+.+++++. .. -..|+|+|.||.+|..++.... ..++-+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~---GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN---GP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHhc---CC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 234566666666766665 22 3679999999999999885432 246777877643210000
Q ss_pred hhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhh
Q 021479 160 RVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFM 239 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (312)
.. ... .-
T Consensus 151 ----------------------------------------------------------------------~~--~~~-~~ 157 (212)
T PF03959_consen 151 ----------------------------------------------------------------------YQ--ELY-DE 157 (212)
T ss_dssp ----------------------------------------------------------------------GT--TTT---
T ss_pred ----------------------------------------------------------------------hh--hhh-cc
Confidence 00 000 12
Q ss_pred hhcCCcEEEEeecCCCCCChhHHHHHHHhCCC-CceeecCCCcccccc
Q 021479 240 RENQSKIAFLFGVDDHWGPQELYEEISEQVPD-VPLAIERHGHTHNFC 286 (312)
Q Consensus 240 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~~ 286 (312)
..|++|+|.++|++|.+++++..+.+.+.+.+ ..+..-++||.....
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~ 205 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRK 205 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCC
Confidence 35789999999999999999999999988766 555544689987765
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.27 E-value=2.2e-10 Score=103.03 Aligned_cols=78 Identities=8% Similarity=-0.058 Sum_probs=57.2
Q ss_pred CccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-----------------cCCCcEEEEeechHHHHHHHHH
Q 021479 67 NASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-----------------NTEVPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 67 ~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-----------------~~~~~~~lvGhS~Gg~ia~~~a 129 (312)
||.|+..|.||+|.|++.. .... .+..+|..+.|+.+.. -.+.+|.++|.|+||.+++..|
T Consensus 279 GYaVV~~D~RGtg~SeG~~-~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aA 356 (767)
T PRK05371 279 GFAVVYVSGIGTRGSDGCP-TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVA 356 (767)
T ss_pred CeEEEEEcCCCCCCCCCcC-ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHH
Confidence 9999999999999997432 2221 3344444444444321 0145899999999999999999
Q ss_pred HhccccceEEEEecccc
Q 021479 130 KRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 130 ~~~p~~v~~lvl~~p~~ 146 (312)
...|+.++++|..+++.
T Consensus 357 a~~pp~LkAIVp~a~is 373 (767)
T PRK05371 357 TTGVEGLETIIPEAAIS 373 (767)
T ss_pred hhCCCcceEEEeeCCCC
Confidence 99998999999877653
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.27 E-value=1e-09 Score=87.37 Aligned_cols=243 Identities=11% Similarity=0.082 Sum_probs=124.1
Q ss_pred CCceEEEEEcCCCCchhcHHH-H-HHHHHHHcCCCccEEEeccCCCccCccCCC---CCcchHH-------HHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKD-F-VQSLYEHLGGNASISAIGSAAQTKKNYDHG---RLFSLDE-------QVEHKMDFI 102 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~-~-~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~---~~~~~~~-------~~~~~~~~i 102 (312)
+.+|..|.++|.|.+....+. + +..+. .+|+..+.+..|-||...+... ...+..| .+.+...++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl---~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLL---KEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHH---HcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 348888899998885543322 1 33344 3499999999999997642211 1223333 233333344
Q ss_pred HHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCc
Q 021479 103 RQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILP 182 (312)
Q Consensus 103 ~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (312)
..+..+...++.+.|.||||.+|...|...|..+..+-.+++...... ... +.+...-.+..+...+ . .
T Consensus 167 ~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v--Ft~---Gvls~~i~W~~L~~q~---~---~ 235 (348)
T PF09752_consen 167 HWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV--FTE---GVLSNSINWDALEKQF---E---D 235 (348)
T ss_pred HHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc--hhh---hhhhcCCCHHHHHHHh---c---c
Confidence 443333455999999999999999999999988776666654322111 111 1111111111111100 0 0
Q ss_pred HHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHH
Q 021479 183 SKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELY 262 (312)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 262 (312)
...... ... ................... .....+....++..++..+... ..-.-.+.++.+++|..+|....
T Consensus 236 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~----~Ea~~~m~~~md~~T~l~nf~~-P~dp~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 236 TVYEEE-ISD-IPAQNKSLPLDSMEERRRD----REALRFMRGVMDSFTHLTNFPV-PVDPSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred cchhhh-hcc-cccCcccccchhhccccch----HHHHHHHHHHHHhhccccccCC-CCCCCcEEEEEecCceEechhhc
Confidence 000000 000 0000000000000000000 1111111112222222111111 12233589999999999999999
Q ss_pred HHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHH
Q 021479 263 EEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGL 302 (312)
Q Consensus 263 ~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~ 302 (312)
..+.+..|++++. ++ +||...+-... +.+.+.|.+=
T Consensus 309 ~~Lq~~WPGsEvR~l~-gGHVsA~L~~q---~~fR~AI~Da 345 (348)
T PF09752_consen 309 LSLQEIWPGSEVRYLP-GGHVSAYLLHQ---EAFRQAIYDA 345 (348)
T ss_pred chHHHhCCCCeEEEec-CCcEEEeeech---HHHHHHHHHH
Confidence 9999999999999 76 59977665422 3555555443
No 120
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.27 E-value=3.3e-10 Score=84.39 Aligned_cols=220 Identities=14% Similarity=0.130 Sum_probs=101.2
Q ss_pred ccccceeeeecCC----CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCC-ccCccCCCCCcchHHHHH
Q 021479 22 SIYTAEVLEIEAD----DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQ-TKKNYDHGRLFSLDEQVE 96 (312)
Q Consensus 22 ~g~~~~~~~~~~~----~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~-G~s~~~~~~~~~~~~~~~ 96 (312)
+|.++++.+-.+. ...++||+.+|++.....|..++.+++.. ||+|+.+|.-.| |.|+ ..-..+++....+
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~N---GFhViRyDsl~HvGlSs-G~I~eftms~g~~ 86 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSAN---GFHVIRYDSLNHVGLSS-GDINEFTMSIGKA 86 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTT---T--EEEE---B--------------HHHHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhC---CeEEEeccccccccCCC-CChhhcchHHhHH
Confidence 4445555554442 23589999999999999999966665555 999999998866 7787 4455678877777
Q ss_pred HHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHH
Q 021479 97 HKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIA 176 (312)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (312)
++...++.+......++-|+.-|+.|-+|+..|.+- .+.-+|..-..+. .+.. +.+... ..
T Consensus 87 sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVn--------------lr~T-Le~al~--~D 147 (294)
T PF02273_consen 87 SLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVN--------------LRDT-LEKALG--YD 147 (294)
T ss_dssp HHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S---------------HHHH-HHHHHS--S-
T ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeee--------------HHHH-HHHHhc--cc
Confidence 766666655333445799999999999999999954 3666665433221 0000 000000 00
Q ss_pred HhcCCcHHHHHHHHHcccCCCCc-hhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCC
Q 021479 177 SLGILPSKALRFLVSNSLGRSWS-ATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDH 255 (312)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 255 (312)
+++......... . .+.+-... +..+.+. .... +..+. .....++.+++|++.+++++|.
T Consensus 148 yl~~~i~~lp~d-l-dfeGh~l~~~vFv~dc-------------~e~~---w~~l~--ST~~~~k~l~iP~iaF~A~~D~ 207 (294)
T PF02273_consen 148 YLQLPIEQLPED-L-DFEGHNLGAEVFVTDC-------------FEHG---WDDLD--STINDMKRLSIPFIAFTANDDD 207 (294)
T ss_dssp GGGS-GGG--SE-E-EETTEEEEHHHHHHHH-------------HHTT----SSHH--HHHHHHTT--S-EEEEEETT-T
T ss_pred hhhcchhhCCCc-c-cccccccchHHHHHHH-------------HHcC---Cccch--hHHHHHhhCCCCEEEEEeCCCc
Confidence 000000000000 0 00000000 0000000 0000 00000 0124566789999999999999
Q ss_pred CCChhHHHHHHHhCC--CCcee-ecCCCcccc
Q 021479 256 WGPQELYEEISEQVP--DVPLA-IERHGHTHN 284 (312)
Q Consensus 256 ~~~~~~~~~~~~~~~--~~~~~-i~~~gH~~~ 284 (312)
|+......++...+. .+++. +++++|...
T Consensus 208 WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 208 WVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp TS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred cccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999988888554 45566 899999654
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.25 E-value=5.2e-11 Score=91.39 Aligned_cols=106 Identities=20% Similarity=0.246 Sum_probs=76.3
Q ss_pred cCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHH----Hh-
Q 021479 32 EADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQ----EL- 106 (312)
Q Consensus 32 ~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~----~~- 106 (312)
...+.-|++||+||+......|..++++++.. ||-|+++|+...+... .... -+.+..+++|+.+ .+
T Consensus 12 ~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvASh---GyIVV~~d~~~~~~~~-~~~~----~~~~~~vi~Wl~~~L~~~l~ 83 (259)
T PF12740_consen 12 SSAGTYPVVLFLHGFLLINSWYSQLLEHVASH---GYIVVAPDLYSIGGPD-DTDE----VASAAEVIDWLAKGLESKLP 83 (259)
T ss_pred CCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhC---ceEEEEecccccCCCC-cchh----HHHHHHHHHHHHhcchhhcc
Confidence 33455799999999998888899988888888 9999999976543321 1111 1223333343332 11
Q ss_pred ----hcCCCcEEEEeechHHHHHHHHHHhc-----cccceEEEEecccc
Q 021479 107 ----QNTEVPIVLVGHSIGAYVALEMLKRS-----SEKVIYYIGLYPFL 146 (312)
Q Consensus 107 ----~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~p~~ 146 (312)
.+. .++.|.|||-||-+|..++..+ +.++++++++.|+-
T Consensus 84 ~~v~~D~-s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 84 LGVKPDF-SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccc-cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 112 3799999999999999999887 56899999999864
No 122
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.25 E-value=1.7e-09 Score=87.12 Aligned_cols=240 Identities=13% Similarity=0.101 Sum_probs=133.5
Q ss_pred eccccceeeeecC--C-CCceEEEEEcCCCC-----chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchH
Q 021479 21 VSIYTAEVLEIEA--D-DPKLHVLFVPGNPG-----VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLD 92 (312)
Q Consensus 21 ~~g~~~~~~~~~~--~-~~~~~iv~~HG~~~-----~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~ 92 (312)
.+++..+++.... . ...|.||++||++. ....|+.+...++..+ +..|+.+|+|=- + ....+..++
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~--~~vvvSVdYRLA---P-Eh~~Pa~y~ 144 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAEL--NCVVVSVDYRLA---P-EHPFPAAYD 144 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHc--CeEEEecCcccC---C-CCCCCccch
Confidence 3444555444433 2 45799999999874 2557888888877664 588899998732 2 222345566
Q ss_pred HHHHHHHHHHHH-Hhh--cCCCcEEEEeechHHHHHHHHHHhc------cccceEEEEecccccccCCCCcccccchhhh
Q 021479 93 EQVEHKMDFIRQ-ELQ--NTEVPIVLVGHSIGAYVALEMLKRS------SEKVIYYIGLYPFLALIRPSVTQSIIGRVAA 163 (312)
Q Consensus 93 ~~~~~~~~~i~~-~~~--~~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 163 (312)
|-.+.+.-+.+. ... ....+++|+|-|.||.+|..+|.+. +-+++|.||+-|+...........+.. ...
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~-~~~ 223 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQN-LNG 223 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHh-hcC
Confidence 666665555553 111 1224799999999999999988653 347999999999765443322111000 000
Q ss_pred hhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCc---hhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhh
Q 021479 164 SNIASTALSYIIASLGILPSKALRFLVSNSLGRSWS---ATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMR 240 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (312)
. ..........+.+.+++.... ...+.. ... .......
T Consensus 224 ~--------------~~~~~~~~~~~w~~~lP~~~~~~~~p~~np------------------------~~~-~~~~d~~ 264 (336)
T KOG1515|consen 224 S--------------PELARPKIDKWWRLLLPNGKTDLDHPFINP------------------------VGN-SLAKDLS 264 (336)
T ss_pred C--------------cchhHHHHHHHHHHhCCCCCCCcCCccccc------------------------ccc-ccccCcc
Confidence 0 000111111111121121110 000000 000 0000111
Q ss_pred hcC-CcEEEEeecCCCCCChh--HHHHHHHhCCCCcee-ecCCCccccccccc-cchHHHHHHHHHHHHhh
Q 021479 241 ENQ-SKIAFLFGVDDHWGPQE--LYEEISEQVPDVPLA-IERHGHTHNFCCSE-AGSAWVASHVAGLIKNK 306 (312)
Q Consensus 241 ~i~-~P~lii~G~~D~~~~~~--~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~-~~~~~v~~~v~~~l~~~ 306 (312)
... .|++++.++.|.+.+.. +++.+++.--.+++. .+++.|..++-.|. ..+..+.+.+.+||++.
T Consensus 265 ~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 265 GLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 223 36999999999887544 344444432234444 78888977766654 55678888889999864
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.24 E-value=1.8e-09 Score=88.26 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=67.7
Q ss_pred CCceEEEEEcCCCC---chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHh---hc
Q 021479 35 DPKLHVLFVPGNPG---VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQEL---QN 108 (312)
Q Consensus 35 ~~~~~iv~~HG~~~---~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~---~~ 108 (312)
.+.|+||++||.+. +......+...++.. .|+.|+.+|+|=--+- .....+++ +.+...++.+.. ..
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~--~g~~vv~vdYrlaPe~----~~p~~~~d-~~~a~~~l~~~~~~~g~ 149 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAA--AGAVVVSVDYRLAPEH----PFPAALED-AYAAYRWLRANAAELGI 149 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHH--cCCEEEecCCCCCCCC----CCCchHHH-HHHHHHHHHhhhHhhCC
Confidence 34799999999764 333443333333332 3899999999843211 11222333 333334444321 11
Q ss_pred CCCcEEEEeechHHHHHHHHHHhccc----cceEEEEecccccccC
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSE----KVIYYIGLYPFLALIR 150 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~ 150 (312)
..+++.++|+|.||.+++.++..-.+ ...+.+++.|......
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 24589999999999999999977654 4688899998765443
No 124
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.17 E-value=2.7e-09 Score=82.91 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=64.3
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHH-HHcCCCccEEEec--cCCC----cc--Cc-c--------CCCCCcchHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLY-EHLGGNASISAIG--SAAQ----TK--KN-Y--------DHGRLFSLDEQVEHK 98 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~l~~~~~vi~~D--~~G~----G~--s~-~--------~~~~~~~~~~~~~~~ 98 (312)
..|.||+||++++...+..++..+. +. ...-.++.++ --|+ |. .. . ......++...+..+
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 4568999999999999999877776 32 1123443333 2232 11 00 0 111113556666666
Q ss_pred HHHHHHHhh--cCCCcEEEEeechHHHHHHHHHHhccc-----cceEEEEecccc
Q 021479 99 MDFIRQELQ--NTEVPIVLVGHSIGAYVALEMLKRSSE-----KVIYYIGLYPFL 146 (312)
Q Consensus 99 ~~~i~~~~~--~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~p~~ 146 (312)
...+..+.. +.. ++.+|||||||..++.|+..+.. ++.++|.|+.+.
T Consensus 90 ~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 90 KKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 666655432 234 89999999999999999987542 589999987433
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.16 E-value=3.1e-09 Score=80.65 Aligned_cols=107 Identities=8% Similarity=0.020 Sum_probs=65.9
Q ss_pred CceEEEEEcCCCCchhcHHHHH--HHHHHHcCCCccEEEeccCCCccCc--cC--CCCC---cchHHHHHHHHHHHHHHh
Q 021479 36 PKLHVLFVPGNPGVITFYKDFV--QSLYEHLGGNASISAIGSAAQTKKN--YD--HGRL---FSLDEQVEHKMDFIRQEL 106 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~--~~l~~~l~~~~~vi~~D~~G~G~s~--~~--~~~~---~~~~~~~~~~~~~i~~~~ 106 (312)
+.|.||++||.+++...+.... ..+++. .+|-|+.++........ +. .... ..-...+..+++.+...+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~--~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADR--EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhc--CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 5689999999999988765421 223333 46888888754211110 00 0000 011112333333333322
Q ss_pred hcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 107 QNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 107 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
.-...+|++.|+|.||.++..++..+|+.+.++...+.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 22235899999999999999999999999999887664
No 126
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.13 E-value=1.1e-09 Score=84.63 Aligned_cols=112 Identities=18% Similarity=0.055 Sum_probs=76.0
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc-CCCcE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN-TEVPI 113 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 113 (312)
+++..+||+||+..+.+.--.-+..+...+.-...++.+.||+.|.-........+.......+.++|+.+... ...++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 45788999999998865533323334455543448999999988864322222234555667777777776433 34689
Q ss_pred EEEeechHHHHHHHHHHhc----c-----ccceEEEEecccc
Q 021479 114 VLVGHSIGAYVALEMLKRS----S-----EKVIYYIGLYPFL 146 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~----p-----~~v~~lvl~~p~~ 146 (312)
+|++||||+.+.+...... + .++..++|++|-+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999999886431 1 3678899888744
No 127
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.13 E-value=2.7e-09 Score=78.61 Aligned_cols=197 Identities=13% Similarity=0.101 Sum_probs=121.2
Q ss_pred ceeeeeccccceeeeecCCCCceEEEEEcCCCCchhc-HHHHHHHHHHHcCCCccEEEeccC-CCccCccCCC-------
Q 021479 16 LRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITF-YKDFVQSLYEHLGGNASISAIGSA-AQTKKNYDHG------- 86 (312)
Q Consensus 16 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~-~~~~~~~l~~~l~~~~~vi~~D~~-G~G~s~~~~~------- 86 (312)
.+..++.|.++. ..++..++..||.+--.-|.... -+..+..++.. ||.|+.+|+- |=-.|.....
T Consensus 20 g~~~~v~gldaY--v~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~---Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~ 94 (242)
T KOG3043|consen 20 GREEEVGGLDAY--VVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALN---GYTVLVPDFFRGDPWSPSLQKSERPEWM 94 (242)
T ss_pred CceEeecCeeEE--EecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcC---CcEEEcchhhcCCCCCCCCChhhhHHHH
Confidence 455666776643 34444444566666655444333 34433334333 9999999975 4111110000
Q ss_pred CCcc---hHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccccccCCCCcccccchhhh
Q 021479 87 RLFS---LDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALIRPSVTQSIIGRVAA 163 (312)
Q Consensus 87 ~~~~---~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 163 (312)
...+ ....+..++++|+.. ....++-++|.+|||.++..+....| .+.+.+..-|..
T Consensus 95 ~~~~~~~~~~~i~~v~k~lk~~--g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~----------------- 154 (242)
T KOG3043|consen 95 KGHSPPKIWKDITAVVKWLKNH--GDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF----------------- 154 (242)
T ss_pred hcCCcccchhHHHHHHHHHHHc--CCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc-----------------
Confidence 0112 223444555555544 33668999999999999998888887 577777544311
Q ss_pred hhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcC
Q 021479 164 SNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQ 243 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (312)
.+.+...+++
T Consensus 155 ----------------------------------------------------------------------~d~~D~~~vk 164 (242)
T KOG3043|consen 155 ----------------------------------------------------------------------VDSADIANVK 164 (242)
T ss_pred ----------------------------------------------------------------------CChhHHhcCC
Confidence 1122345678
Q ss_pred CcEEEEeecCCCCCChhHHHHHHHhCCC-----Ccee-ecCCCcccc-----ccccc--cchHHHHHHHHHHHHhhc
Q 021479 244 SKIAFLFGVDDHWGPQELYEEISEQVPD-----VPLA-IERHGHTHN-----FCCSE--AGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~~~~~~~~-----~~~~-i~~~gH~~~-----~~~~~--~~~~~v~~~v~~~l~~~~ 307 (312)
+|++++.|+.|.++|++....+.+.+.. .+++ +++-+|--+ .+.|+ ...++..+.+.+|+++.+
T Consensus 165 ~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 165 APILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988887775532 2467 788888433 33344 345677778888988764
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.13 E-value=7.8e-09 Score=76.21 Aligned_cols=185 Identities=19% Similarity=0.212 Sum_probs=119.5
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCC----CccCcc-------------------------CCC
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAA----QTKKNY-------------------------DHG 86 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G----~G~s~~-------------------------~~~ 86 (312)
.++.|||+||+-.+...|..=...+.+.+.+-+..+.+|-|- -+.++. ...
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 356799999999999988776666777777678888888762 011100 001
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--------cceEEEEecccccccCCCCccccc
Q 021479 87 RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--------KVIYYIGLYPFLALIRPSVTQSII 158 (312)
Q Consensus 87 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~ 158 (312)
....++...+.+.+++.+. .. ==-|+|+|.|+.++..++..... .++=+|+++.+..
T Consensus 84 ~~~~~eesl~yl~~~i~en---GP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~----------- 148 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKEN---GP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKF----------- 148 (230)
T ss_pred cccChHHHHHHHHHHHHHh---CC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCC-----------
Confidence 1223555667777777775 21 24599999999999988872110 2344444432110
Q ss_pred chhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhh
Q 021479 159 GRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAF 238 (312)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (312)
+. .. + .....
T Consensus 149 -----------------------~~-----------------~~------------------------~------~~~~~ 158 (230)
T KOG2551|consen 149 -----------------------PS-----------------KK------------------------L------DESAY 158 (230)
T ss_pred -----------------------Cc-----------------ch------------------------h------hhhhh
Confidence 00 00 0 00011
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCceeecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLAIERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
...+++|.|.|.|+.|.++|...++.+++.+++..+..-.+||...-. ....+.+++++..++++.+
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~--~~~~~~i~~fi~~~~~~~~ 225 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNK--AKYKEKIADFIQSFLQEES 225 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCc--hHHHHHHHHHHHHHHHhhh
Confidence 246899999999999999999999999999999955555689987665 3445566666666665544
No 129
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=8.9e-09 Score=92.60 Aligned_cols=227 Identities=11% Similarity=0.131 Sum_probs=136.4
Q ss_pred cccceeeeeccccceeeeecC-----CCCceEEEEEcCCCCchh-------cHHHHHHHHHHHcCCCccEEEeccCCCcc
Q 021479 13 SVNLRLSNVSIYTAEVLEIEA-----DDPKLHVLFVPGNPGVIT-------FYKDFVQSLYEHLGGNASISAIGSAAQTK 80 (312)
Q Consensus 13 ~~~~~~~~~~g~~~~~~~~~~-----~~~~~~iv~~HG~~~~~~-------~~~~~~~~l~~~l~~~~~vi~~D~~G~G~ 80 (312)
......+..+|+...+...-+ .++-|.+|.+||.+++.. .|..+ ... ..++.|+.+|.||-|.
T Consensus 497 ~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s---~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 497 IVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVS---SRGFAVLQVDGRGSGG 571 (755)
T ss_pred cceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhc---cCCeEEEEEcCCCcCC
Confidence 344444555777776666544 234588999999997322 23332 111 2389999999998886
Q ss_pred Ccc-------CCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEE-EEecccccccCCC
Q 021479 81 KNY-------DHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYY-IGLYPFLALIRPS 152 (312)
Q Consensus 81 s~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~p~~~~~~~~ 152 (312)
... ..-.....+|....+..+++..+. ...++.++|+|.||.+++..+...|+.+.++ +.++|+....-..
T Consensus 572 ~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~i-D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yd 650 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFI-DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYD 650 (755)
T ss_pred cchhHHHHhhhhcCCcchHHHHHHHHHHHhcccc-cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeec
Confidence 532 122234667777777777776533 2348999999999999999999998666555 8889865422110
Q ss_pred CcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHHHHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcC
Q 021479 153 VTQSIIGRVAASNIASTALSYIIASLGILPSKALRFLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKN 232 (312)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (312)
... ..++++........ . ...
T Consensus 651 s~~----------------------------------terymg~p~~~~~~--y---------------------~e~-- 671 (755)
T KOG2100|consen 651 STY----------------------------------TERYMGLPSENDKG--Y---------------------EES-- 671 (755)
T ss_pred ccc----------------------------------cHhhcCCCccccch--h---------------------hhc--
Confidence 000 00000000000000 0 000
Q ss_pred CCChhhhhhcCCcE-EEEeecCCCCCChhHHHHHHHhCC--C--Ccee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 233 TPDWAFMRENQSKI-AFLFGVDDHWGPQELYEEISEQVP--D--VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 233 ~~~~~~l~~i~~P~-lii~G~~D~~~~~~~~~~~~~~~~--~--~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
.....+..++.|. |++||+.|..+..+....+.+.+. + .+.. +++.+|...-.. ....+...+..|+...
T Consensus 672 -~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~---~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 672 -SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE---VISHLYEKLDRFLRDC 747 (755)
T ss_pred -cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc---chHHHHHHHHHHHHHH
Confidence 0112233455555 999999999998887777776442 2 3444 788988755442 1247778888898865
Q ss_pred cc
Q 021479 307 IP 308 (312)
Q Consensus 307 ~~ 308 (312)
+.
T Consensus 748 ~~ 749 (755)
T KOG2100|consen 748 FG 749 (755)
T ss_pred cC
Confidence 54
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.06 E-value=1.4e-08 Score=84.17 Aligned_cols=107 Identities=24% Similarity=0.265 Sum_probs=58.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccC------cc----CC-------C-------CC--
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKK------NY----DH-------G-------RL-- 88 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s------~~----~~-------~-------~~-- 88 (312)
+.-|+|||-||++++...|..+...|+.. ||-|+++|.|..-.. +. .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~---GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASH---GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHT---T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhC---CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 44799999999999999999988888888 999999999954211 00 00 0 00
Q ss_pred ---cc-----hHHHHHHHH---HHHHHHhhc-------------------C-CCcEEEEeechHHHHHHHHHHhccccce
Q 021479 89 ---FS-----LDEQVEHKM---DFIRQELQN-------------------T-EVPIVLVGHSIGAYVALEMLKRSSEKVI 137 (312)
Q Consensus 89 ---~~-----~~~~~~~~~---~~i~~~~~~-------------------~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 137 (312)
+. ++.-+.++. +.+..+..+ + -.++.++|||+||..++..+.+. .+++
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~ 253 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFK 253 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcc
Confidence 00 111222333 333321100 0 13699999999999999888776 5788
Q ss_pred EEEEeccc
Q 021479 138 YYIGLYPF 145 (312)
Q Consensus 138 ~lvl~~p~ 145 (312)
..|++.|+
T Consensus 254 ~~I~LD~W 261 (379)
T PF03403_consen 254 AGILLDPW 261 (379)
T ss_dssp EEEEES--
T ss_pred eEEEeCCc
Confidence 88887753
No 131
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.05 E-value=2.1e-09 Score=84.07 Aligned_cols=123 Identities=13% Similarity=0.093 Sum_probs=79.8
Q ss_pred ccceeeeeccccceeeee--cCC---CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCC
Q 021479 14 VNLRLSNVSIYTAEVLEI--EAD---DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRL 88 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~--~~~---~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~ 88 (312)
...+...++|-.+..+.. .++ +....|||+-|..|--+. ..+..=++. ||.|+.+++||++.|.+ ....
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~l---gYsvLGwNhPGFagSTG-~P~p 288 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQL---GYSVLGWNHPGFAGSTG-LPYP 288 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHh---CceeeccCCCCccccCC-CCCc
Confidence 344444555544333332 222 225678888886553221 111112334 89999999999999973 3333
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 89 FSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
..-...++.++++.-+.+.-..+.++|+|+|.||..++..|..||+ |+++||-+
T Consensus 289 ~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred ccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 3444566677777666443334589999999999999999999997 99999755
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.01 E-value=2.4e-09 Score=80.84 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHH----Hhh--
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQ----ELQ-- 107 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~----~~~-- 107 (312)
.+.-|+|+|+||+.-....|..++.+++.. ||-|+++++-.- .. + ....--+++..+.+|+.. .++
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASH---GfIVVAPQl~~~--~~--p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASH---GFIVVAPQLYTL--FP--P-DGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhc---CeEEEechhhcc--cC--C-CchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 455689999999999999999999998888 999999998642 11 1 111111334444444433 221
Q ss_pred ---cCCCcEEEEeechHHHHHHHHHHhcc--ccceEEEEeccccccc
Q 021479 108 ---NTEVPIVLVGHSIGAYVALEMLKRSS--EKVIYYIGLYPFLALI 149 (312)
Q Consensus 108 ---~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~p~~~~~ 149 (312)
+. .++.|+|||.||-+|..+|..+. -++.++|.+.|+....
T Consensus 115 V~~nl-~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 115 VEANL-SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred ccccc-ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 12 48999999999999999998774 2589999988865544
No 133
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.00 E-value=1e-09 Score=88.98 Aligned_cols=113 Identities=20% Similarity=0.188 Sum_probs=62.2
Q ss_pred CCCceEEEEEcCCCCch--hcH-HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHh---h
Q 021479 34 DDPKLHVLFVPGNPGVI--TFY-KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQEL---Q 107 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~--~~~-~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~---~ 107 (312)
+..+|++|++||+.++. ..| ..+...+.+....+++||++|+...-... ..............+.++|..+. .
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 45689999999999887 234 44333222221147999999996332111 00001112223333444444432 1
Q ss_pred cCCCcEEEEeechHHHHHHHHHHhccc--cceEEEEeccccc
Q 021479 108 NTEVPIVLVGHSIGAYVALEMLKRSSE--KVIYYIGLYPFLA 147 (312)
Q Consensus 108 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~p~~~ 147 (312)
-..++++|||||+||.+|-..+..... +|.+++.+.|...
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 123589999999999999999988877 8999999887543
No 134
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.99 E-value=2.3e-09 Score=89.94 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=68.0
Q ss_pred CchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHH
Q 021479 48 GVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVAL 126 (312)
Q Consensus 48 ~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~ 126 (312)
.....|..++..|.+. ||.+ ..|++|+|.+.... ...++.++++.++++..+. ...++++|+||||||.+++
T Consensus 105 ~~~~~~~~li~~L~~~---GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW---GYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVK 177 (440)
T ss_pred chHHHHHHHHHHHHHc---CCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHH
Confidence 4557788866666655 6654 89999999986322 2345666666666666432 2345899999999999999
Q ss_pred HHHHhcccc----ceEEEEecccccc
Q 021479 127 EMLKRSSEK----VIYYIGLYPFLAL 148 (312)
Q Consensus 127 ~~a~~~p~~----v~~lvl~~p~~~~ 148 (312)
.++..+|+. |+++|.+++....
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCCCC
Confidence 999988863 7889988865443
No 135
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.98 E-value=9.1e-10 Score=83.38 Aligned_cols=89 Identities=19% Similarity=0.235 Sum_probs=53.8
Q ss_pred EEEEEcCCCC-chhcHHHHHHHHHHHcCCCcc---EEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCcE
Q 021479 39 HVLFVPGNPG-VITFYKDFVQSLYEHLGGNAS---ISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVPI 113 (312)
Q Consensus 39 ~iv~~HG~~~-~~~~~~~~~~~l~~~l~~~~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~ 113 (312)
||||+||..+ ....|..+.+.|.+. ||. |+++++-...... .........+.+.++.++|+..+. ... +|
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~---GY~~~~vya~tyg~~~~~~-~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAA---GYCDSEVYALTYGSGNGSP-SVQNAHMSCESAKQLRAFIDAVLAYTGA-KV 77 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHT---T--CCCEEEE--S-CCHHT-HHHHHHB-HHHHHHHHHHHHHHHHHHT---E
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHc---CCCcceeEeccCCCCCCCC-cccccccchhhHHHHHHHHHHHHHhhCC-EE
Confidence 5999999998 567798977777766 999 7999985444322 111111234555677777776542 234 89
Q ss_pred EEEeechHHHHHHHHHHhc
Q 021479 114 VLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~ 132 (312)
.||||||||.++-.+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999988887644
No 136
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.96 E-value=5.4e-08 Score=70.87 Aligned_cols=98 Identities=19% Similarity=0.234 Sum_probs=71.4
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc-CCCcEEEE
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN-TEVPIVLV 116 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~lv 116 (312)
..+||+.|=+|-...=+.+...|.+. |+.|+.+|-+-|--+. .+.++.+.|+.++++.+... ..++++|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~---G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQ---GVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHC---CCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEE
Confidence 45788899887655545544445444 9999999976554442 35567777777777765322 34589999
Q ss_pred eechHHHHHHHHHHhcc----ccceEEEEecc
Q 021479 117 GHSIGAYVALEMLKRSS----EKVIYYIGLYP 144 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p----~~v~~lvl~~p 144 (312)
|+|+|+-+.-....+.| ++|+.++|++|
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEecc
Confidence 99999988888777777 47999999886
No 137
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.92 E-value=3.3e-07 Score=72.50 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=71.2
Q ss_pred eeeccccceeeeecC--CCCceEEEEEcCCCCchhcH------HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcc
Q 021479 19 SNVSIYTAEVLEIEA--DDPKLHVLFVPGNPGVITFY------KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFS 90 (312)
Q Consensus 19 ~~~~g~~~~~~~~~~--~~~~~~iv~~HG~~~~~~~~------~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~ 90 (312)
...+++.+..++..- .++.-.||+.-|.++.-+.. ..-+..+++.+ +-+|+.+++||.|.|.+.. ...+
T Consensus 117 Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~--~aNvl~fNYpGVg~S~G~~-s~~d 193 (365)
T PF05677_consen 117 IQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKEL--GANVLVFNYPGVGSSTGPP-SRKD 193 (365)
T ss_pred EeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHc--CCcEEEECCCccccCCCCC-CHHH
Confidence 345777766666553 34455789989987765541 12233355553 7999999999999997433 2334
Q ss_pred hHHHHHHHHHHHHHHhhc-CCCcEEEEeechHHHHHHHHHHhcc
Q 021479 91 LDEQVEHKMDFIRQELQN-TEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 91 ~~~~~~~~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+-...+.++++++....+ ..+.+++.|||+||.++.+.+.++.
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 444444455555432111 1257999999999999998776654
No 138
>PRK04940 hypothetical protein; Provisional
Probab=98.91 E-value=6.1e-07 Score=65.26 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=54.9
Q ss_pred EEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc-CCCcEEEE
Q 021479 40 VLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN-TEVPIVLV 116 (312)
Q Consensus 40 iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~lv 116 (312)
|+++||+.+++.. .+- ..+. .+..+.+++ +++ +....+.++.+.+.+..+... ..+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l~-~~~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQLQ-FIDPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhhe-eeCCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 7999999998877 432 1111 222233333 221 123344555555666543211 11479999
Q ss_pred eechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 117 GHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 117 GhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
|.|+||+.|..+|.++. + ..||++|.+.
T Consensus 66 GSSLGGyyA~~La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred EeChHHHHHHHHHHHHC--C-CEEEECCCCC
Confidence 99999999999999986 4 5678888653
No 139
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.90 E-value=3e-07 Score=73.78 Aligned_cols=61 Identities=13% Similarity=0.165 Sum_probs=42.1
Q ss_pred hcCCcEEEEeecCCCCCChhHHHHHHHhC--C---CCcee-ecCCCccccccccccchHHHHHHHHHHHHhhcc
Q 021479 241 ENQSKIAFLFGVDDHWGPQELYEEISEQV--P---DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 241 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~---~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~~ 308 (312)
..+.|+++.+|..|.++|......+.+.. . +++++ ++..+|...... -.....+||++++.
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFA 283 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHC
Confidence 34789999999999999999888766643 2 34444 567888765432 11345577777764
No 140
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.85 E-value=1.2e-08 Score=78.09 Aligned_cols=53 Identities=23% Similarity=0.311 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 93 EQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 93 ~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
++.+..++++..+-.-..+++.|+|.|.||-+|+.+|..+| .|+.+|.++|..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 34566667777652222358999999999999999999999 699999988743
No 141
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.82 E-value=6.5e-08 Score=74.35 Aligned_cols=94 Identities=23% Similarity=0.196 Sum_probs=69.8
Q ss_pred EEcCCC--CchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 021479 42 FVPGNP--GVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 42 ~~HG~~--~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
++|+.+ ++...|.. +...+...+.|+++|++|++.+.. ...++++.++...+.+... ....+++++|||
T Consensus 2 ~~~~~~~~~~~~~~~~----~~~~l~~~~~v~~~~~~g~~~~~~---~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s 72 (212)
T smart00824 2 CFPSTAAPSGPHEYAR----LAAALRGRRDVSALPLPGFGPGEP---LPASADALVEAQAEAVLRA--AGGRPFVLVGHS 72 (212)
T ss_pred ccCCCCCCCcHHHHHH----HHHhcCCCccEEEecCCCCCCCCC---CCCCHHHHHHHHHHHHHHh--cCCCCeEEEEEC
Confidence 445543 56677888 777777789999999999987642 2346777777776666655 334589999999
Q ss_pred hHHHHHHHHHHhc---cccceEEEEecc
Q 021479 120 IGAYVALEMLKRS---SEKVIYYIGLYP 144 (312)
Q Consensus 120 ~Gg~ia~~~a~~~---p~~v~~lvl~~p 144 (312)
+||.++..++.+. ++.+.+++++.+
T Consensus 73 ~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 73 SGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 9999999998763 456889987764
No 142
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.81 E-value=1.2e-07 Score=69.80 Aligned_cols=107 Identities=21% Similarity=0.215 Sum_probs=72.1
Q ss_pred CCCceEEEEEcCCCCchh---cHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cC
Q 021479 34 DDPKLHVLFVPGNPGVIT---FYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NT 109 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~---~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~ 109 (312)
+..+..|||+-|.+..-- +-.++..++-+ .+|.++-+-++.+ ...-...++.++++|+..++++... +.
T Consensus 33 gv~~~~vvfiGGLgdgLl~~~y~~~L~~~lde---~~wslVq~q~~Ss----y~G~Gt~slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 33 GVESVKVVFIGGLGDGLLICLYTTMLNRYLDE---NSWSLVQPQLRSS----YNGYGTFSLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred CceEEEEEEEcccCCCccccccHHHHHHHHhh---ccceeeeeecccc----ccccccccccccHHHHHHHHHHhhccCc
Confidence 334567899988876432 22443333333 3899999887622 1112245789999999999997521 12
Q ss_pred CCcEEEEeechHHHHHHHHHHh--ccccceEEEEeccccc
Q 021479 110 EVPIVLVGHSIGAYVALEMLKR--SSEKVIYYIGLYPFLA 147 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~p~~~ 147 (312)
...++|+|||-|+.=.+.|..+ .|..+...|+.+|+.+
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 2489999999999999998833 4567888898888654
No 143
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.80 E-value=5.4e-06 Score=70.85 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=81.3
Q ss_pred ceeeeec---cccceeeeecC---CCCceEEEEEcCCCCchhcHHHHHHHHHHH-------------------cCCCccE
Q 021479 16 LRLSNVS---IYTAEVLEIEA---DDPKLHVLFVPGNPGVITFYKDFVQSLYEH-------------------LGGNASI 70 (312)
Q Consensus 16 ~~~~~~~---g~~~~~~~~~~---~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~-------------------l~~~~~v 70 (312)
.-++.++ +..+.|...++ .+.+|+||++.|.||++..+-. +.+. ..+..++
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~----f~e~GP~~~~~~~~~~l~~n~~sW~~~an~ 88 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGL----FGENGPFRINPDGPYTLEDNPYSWNKFANL 88 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHH----HCTTSSEEEETTSTSEEEE-TT-GGGTSEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccccc----ccccCceEEeecccccccccccccccccce
Confidence 3445555 33444444444 3558999999999999988754 2221 0124788
Q ss_pred EEeccC-CCccCccCCC--CCcchHHHHHHHHHHHHHHhh---c-CCCcEEEEeechHHHHHHHHHHh----c------c
Q 021479 71 SAIGSA-AQTKKNYDHG--RLFSLDEQVEHKMDFIRQELQ---N-TEVPIVLVGHSIGAYVALEMLKR----S------S 133 (312)
Q Consensus 71 i~~D~~-G~G~s~~~~~--~~~~~~~~~~~~~~~i~~~~~---~-~~~~~~lvGhS~Gg~ia~~~a~~----~------p 133 (312)
+-+|.| |.|.|..... ...+.++.++++.++|+.++. + ...+++|.|-|+||..+-.+|.. . +
T Consensus 89 l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~ 168 (415)
T PF00450_consen 89 LFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPK 168 (415)
T ss_dssp EEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STT
T ss_pred EEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccc
Confidence 999966 9999864333 245788899999999888642 2 23489999999999987766632 2 2
Q ss_pred ccceEEEEecccccc
Q 021479 134 EKVIYYIGLYPFLAL 148 (312)
Q Consensus 134 ~~v~~lvl~~p~~~~ 148 (312)
-.++|+++.+|++.+
T Consensus 169 inLkGi~IGng~~dp 183 (415)
T PF00450_consen 169 INLKGIAIGNGWIDP 183 (415)
T ss_dssp SEEEEEEEESE-SBH
T ss_pred cccccceecCccccc
Confidence 358999998887654
No 144
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.80 E-value=2e-06 Score=71.80 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=59.7
Q ss_pred HHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHh---hcCCCcEEEEeechHHHHHHHHHHhccccc
Q 021479 60 LYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQEL---QNTEVPIVLVGHSIGAYVALEMLKRSSEKV 136 (312)
Q Consensus 60 l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 136 (312)
+-..|..|+.||.+.+.- .+....++.+.+....+|+++.. ++.. +++|+|.+.||+.++.+|+.+|+.+
T Consensus 93 vG~AL~~GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHcCCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcCcc
Confidence 444566688888776531 23334588887777777777642 2233 8999999999999999999999999
Q ss_pred eEEEEeccccccc
Q 021479 137 IYYIGLYPFLALI 149 (312)
Q Consensus 137 ~~lvl~~p~~~~~ 149 (312)
.-+|+-+.+++..
T Consensus 166 gplvlaGaPlsyw 178 (581)
T PF11339_consen 166 GPLVLAGAPLSYW 178 (581)
T ss_pred CceeecCCCcccc
Confidence 9888875444433
No 145
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.76 E-value=9.6e-08 Score=75.64 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=69.7
Q ss_pred CCCceEEEEEcCCCCchhcH--HHHHHHHHHHc-CCCccEEEeccCCCccC--ccC-----------CCCCcch-HHHHH
Q 021479 34 DDPKLHVLFVPGNPGVITFY--KDFVQSLYEHL-GGNASISAIGSAAQTKK--NYD-----------HGRLFSL-DEQVE 96 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~--~~~~~~l~~~l-~~~~~vi~~D~~G~G~s--~~~-----------~~~~~~~-~~~~~ 96 (312)
.++-|+|+++||.......+ ...+..+...- -...-+++++..+.+.. ... ......+ +...+
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 45579999999973222222 12222222221 01245666776555511 100 0111122 33557
Q ss_pred HHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 97 HKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
++..+|+..+.....+..|+|+||||..|+.++.++|+.+.+++.++|.+.
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 888888886542232389999999999999999999999999999998654
No 146
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.73 E-value=8.5e-08 Score=77.43 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=56.6
Q ss_pred CCCceEEEEEcCCCCchhc--------------H----HHHHHHHHHHcCCCccEEEeccCCCccCccCCC----CCcch
Q 021479 34 DDPKLHVLFVPGNPGVITF--------------Y----KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHG----RLFSL 91 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~--------------~----~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~----~~~~~ 91 (312)
.++-|.||++||-++..+. + ..+...+++. ||-|+++|.+|+|+...... ..++.
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~---GYVvla~D~~g~GER~~~e~~~~~~~~~~ 188 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR---GYVVLAPDALGFGERGDMEGAAQGSNYDC 188 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT---TSEEEEE--TTSGGG-SSCCCTTTTS--H
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC---CCEEEEEccccccccccccccccccchhH
Confidence 3567999999997765422 1 1234445544 99999999999998742211 11121
Q ss_pred HHHHH---------------H---HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 92 DEQVE---------------H---KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 92 ~~~~~---------------~---~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
+..+. + +++++..+-.-..++|.++|+||||..++.+|+.. ++|+..|..+
T Consensus 189 ~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 189 QALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 11111 1 22333332111235899999999999999999876 4788877544
No 147
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.72 E-value=7.2e-07 Score=65.56 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=70.1
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCCC--------ccC---------ccCCCCCcchHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAAQ--------TKK---------NYDHGRLFSLDEQVEHK 98 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G~--------G~s---------~~~~~~~~~~~~~~~~~ 98 (312)
..+||++||.+.+...|.+++.. +. ++..-|++..|-. +.. .....+...+...++.+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~----l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i 78 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQ----LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNI 78 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHc----CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHH
Confidence 46899999999999999884444 32 2566677644421 111 10122334555666677
Q ss_pred HHHHHHHhhcC--CCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 99 MDFIRQELQNT--EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 99 ~~~i~~~~~~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
..+++...... ..++.+-|.|+||.+++..+..+|..+.+++-.++
T Consensus 79 ~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 79 ANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 77777653321 24689999999999999999999988888885543
No 148
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.70 E-value=4.8e-08 Score=75.05 Aligned_cols=93 Identities=19% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh--cC-CC
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ--NT-EV 111 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~ 111 (312)
++.-.|||+||+.|+...|..+...+... .+++.--.+...++... ......+++..++.+.+.|..... .. ..
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~-~~~~~~~~i~~~~~~~n--~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKI-PEDLPNARIVVLGYSNN--EFKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHh-hhhcchhhhhhhccccc--ccccchhhHHHHHHHHHHHHHhccccccccc
Confidence 34568999999999999998765555541 11111111222222111 111223456555555555444321 11 24
Q ss_pred cEEEEeechHHHHHHHHHH
Q 021479 112 PIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~ 130 (312)
++.+|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 7999999999999865543
No 149
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.63 E-value=8.2e-07 Score=68.79 Aligned_cols=124 Identities=9% Similarity=-0.048 Sum_probs=77.4
Q ss_pred eeccccceeeeecC---CCCceEEEEEcCCCCchhcHHHHH--HHHHHHcCCCccEEEeccC-------CCccCccCCCC
Q 021479 20 NVSIYTAEVLEIEA---DDPKLHVLFVPGNPGVITFYKDFV--QSLYEHLGGNASISAIGSA-------AQTKKNYDHGR 87 (312)
Q Consensus 20 ~~~g~~~~~~~~~~---~~~~~~iv~~HG~~~~~~~~~~~~--~~l~~~l~~~~~vi~~D~~-------G~G~s~~~~~~ 87 (312)
.++|..-.|..+.+ +++.|.||++||..++...+.... +.+++. .+|-|+.+|-- |++.+. .+..
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn~~~~~~~~-~p~~ 117 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWNANGCGNWF-GPAD 117 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccCCCcccccC-Cccc
Confidence 44555544444443 344689999999999887765533 335554 47888888522 111121 0111
Q ss_pred CcchHHHHHHHHHHHHHHhh--cC-CCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 88 LFSLDEQVEHKMDFIRQELQ--NT-EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~--~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
...=.+.+..+.+++..+.. .+ ..+|++.|.|-||.++..++..+|+.+.++..++.+.
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11112344445555444321 12 3589999999999999999999999999998887544
No 150
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.60 E-value=7.4e-07 Score=71.02 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=69.6
Q ss_pred CCceEEEEEcCCCCchhc-HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCc
Q 021479 35 DPKLHVLFVPGNPGVITF-YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVP 112 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~-~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~ 112 (312)
..+.++||+||+..+-.. -.++.+ +...+......+.+-||-.|.--....+..+......++..+|+.+.. ....+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aq-I~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQ-IVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHH-HHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 457889999998876433 122122 333344467788999998776432222223344444555555555422 22458
Q ss_pred EEEEeechHHHHHHHHHHh--------ccccceEEEEecccc
Q 021479 113 IVLVGHSIGAYVALEMLKR--------SSEKVIYYIGLYPFL 146 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~p~~ 146 (312)
++|++||||.+++++...+ .+.+++.+||.+|=+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999988754 234688888877643
No 151
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.59 E-value=1.9e-06 Score=72.83 Aligned_cols=185 Identities=21% Similarity=0.220 Sum_probs=117.1
Q ss_pred ceEEEEEcCCC--CchhcHHHHHHHHHHHcCCCccEEEeccCC-CccCccCCCCCcchHHHHHHHHHHHHHHh-----hc
Q 021479 37 KLHVLFVPGNP--GVITFYKDFVQSLYEHLGGNASISAIGSAA-QTKKNYDHGRLFSLDEQVEHKMDFIRQEL-----QN 108 (312)
Q Consensus 37 ~~~iv~~HG~~--~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G-~G~s~~~~~~~~~~~~~~~~~~~~i~~~~-----~~ 108 (312)
.|.++++||.+ .....|...|........+-..|-++|++. .|. .++..-++.++.+.+..+ ..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 57899999988 233344444555555555557777788762 221 356666666666655321 11
Q ss_pred CCCcEEEEeechHHHHHHHHHHhcc-ccceEEEEecccccccCCCCcccccchhhhhhhhhHHHHHHHHHhcCCcHHHHH
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSS-EKVIYYIGLYPFLALIRPSVTQSIIGRVAASNIASTALSYIIASLGILPSKALR 187 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (312)
...+++|+|.|||+.++........ ..|.++|.++=+.. ...+ ++
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~----~vdg--------------------------pr---- 293 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD----TVDG--------------------------PR---- 293 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc----CCCc--------------------------cc----
Confidence 3458999999999887777665443 34788776541010 0000 00
Q ss_pred HHHHcccCCCCchhHHHHHHhhccchhHHHHHHHHHHHHHhhhcCCCChhhhhhcCCcEEEEeecCCCCCChhHHHHHHH
Q 021479 188 FLVSNSLGRSWSATAVEAACTHLSQYHVMRNVLFMTMTEFKQLKNTPDWAFMRENQSKIAFLFGVDDHWGPQELYEEISE 267 (312)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 267 (312)
. ++ .+.+-.++.|+||+.|.+|..+++...+.+.+
T Consensus 294 ---------g--------------------------------ir----DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vre 328 (784)
T KOG3253|consen 294 ---------G--------------------------------IR----DEALLDMKQPVLFVIGSNDHMCSPNSMEEVRE 328 (784)
T ss_pred ---------C--------------------------------Cc----chhhHhcCCceEEEecCCcccCCHHHHHHHHH
Confidence 0 11 13344678899999999999999999999999
Q ss_pred hCCC-Ccee-ecCCCccccccc-----cccchHHHHHHHHHHHHhhcc
Q 021479 268 QVPD-VPLA-IERHGHTHNFCC-----SEAGSAWVASHVAGLIKNKIP 308 (312)
Q Consensus 268 ~~~~-~~~~-i~~~gH~~~~~~-----~~~~~~~v~~~v~~~l~~~~~ 308 (312)
+... .+++ |.+++|..-.-+ ......+|...+.+||++...
T Consensus 329 KMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt 376 (784)
T KOG3253|consen 329 KMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVT 376 (784)
T ss_pred HhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHH
Confidence 7654 5566 888999766544 123455677777777776643
No 152
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.49 E-value=6.2e-07 Score=73.54 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=69.6
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCcc---EEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCc
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNAS---ISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVP 112 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~ 112 (312)
.-+++++||+......|..+...+... ++. ++++++++.. ..++.....+.+...++..+. ...++
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~-------~~~~~~~~~~ql~~~V~~~l~~~ga~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAIL---GWLTNGVYAFELSGGD-------GTYSLAVRGEQLFAYVDEVLAKTGAKK 128 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcch---HHHhcccccccccccC-------CCccccccHHHHHHHHHHHHhhcCCCc
Confidence 457999999988888888865554444 666 8888887651 122333444444444444321 23358
Q ss_pred EEEEeechHHHHHHHHHHhcc--ccceEEEEecc
Q 021479 113 IVLVGHSIGAYVALEMLKRSS--EKVIYYIGLYP 144 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~p 144 (312)
+.|+||||||.++..++...+ .+|+.++.+++
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 999999999999999999888 78999998774
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.45 E-value=2.5e-06 Score=66.00 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=68.3
Q ss_pred cccceeeeecC-----CCCc-eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCc---cCcc--------CC
Q 021479 23 IYTAEVLEIEA-----DDPK-LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQT---KKNY--------DH 85 (312)
Q Consensus 23 g~~~~~~~~~~-----~~~~-~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G---~s~~--------~~ 85 (312)
|..+.|.-+.+ +++- |.+||+||.+.....-.. .+..+.--++.+.|-.+ .++. ..
T Consensus 171 gneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~-------~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 171 GNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDK-------VLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred CceeeEEEecccccCCCCccccEEEEEecCCCCCchhhh-------hhhcCccceeeecccCceEEEccccccccccccc
Confidence 44555555544 2333 899999999877665332 12123444444444333 1110 11
Q ss_pred CCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 86 GRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 86 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
....-+...++.+.+.+...+.-...+++++|.|+||.-++.++.++|+.+++.++++.
T Consensus 244 ~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 244 KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 11112333444444344443322235899999999999999999999999999998873
No 154
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.44 E-value=4e-06 Score=71.52 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=74.4
Q ss_pred CCceEEEEEcCCCCchhcH-----HHHH--HHHHHHcCCCccEEEeccCCCccCcc-------CCCCCcchHHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFY-----KDFV--QSLYEHLGGNASISAIGSAAQTKKNY-------DHGRLFSLDEQVEHKMD 100 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~-----~~~~--~~l~~~l~~~~~vi~~D~~G~G~s~~-------~~~~~~~~~~~~~~~~~ 100 (312)
++-|+++++-|+++-.-.+ ..++ ..|+.. ||-|+.+|-||...... ..-....++|+++-+.-
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl---Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~ 716 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL---GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQM 716 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhc---ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHH
Confidence 4468999999998743222 1111 123333 99999999998754321 22234567888888876
Q ss_pred HHHHH-hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccc
Q 021479 101 FIRQE-LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 101 ~i~~~-~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
+.+.. +... ++|.+-|+|.||.+++....++|+.++..|.=+|+
T Consensus 717 Laeq~gfidm-drV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 717 LAEQTGFIDM-DRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred HHHhcCcccc-hheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 66665 2223 48999999999999999999999988877755553
No 155
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.40 E-value=2.7e-06 Score=64.26 Aligned_cols=106 Identities=12% Similarity=0.216 Sum_probs=69.6
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCC--CccEEEeccCCCccC----cc-------------CCCCCcchHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGG--NASISAIGSAAQTKK----NY-------------DHGRLFSLDEQVEH 97 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~--~~~vi~~D~~G~G~s----~~-------------~~~~~~~~~~~~~~ 97 (312)
.-|.||+||.+|+......++..+.+.-.. .--++.+|--|-=.. +. ..........+...
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 446899999999999999966666555311 123455555551100 00 11122234556666
Q ss_pred HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc-----cceEEEEecc
Q 021479 98 KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE-----KVIYYIGLYP 144 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~p 144 (312)
+...+...+. +. ++.++||||||.-...|+..+.+ .++++|.++.
T Consensus 125 ~msyL~~~Y~-i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 125 AMSYLQKHYN-IP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHHHhcC-Cc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 6677766543 55 79999999999999999987653 4899998863
No 156
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.37 E-value=1.5e-05 Score=68.36 Aligned_cols=108 Identities=17% Similarity=0.150 Sum_probs=70.2
Q ss_pred ceEEEEEcCCCCchhc---HHHHHHHHHHHcCCCccEEEeccCCCccCcc------CCCCCcchHHHHHHHHHHHHHHhh
Q 021479 37 KLHVLFVPGNPGVITF---YKDFVQSLYEHLGGNASISAIGSAAQTKKNY------DHGRLFSLDEQVEHKMDFIRQELQ 107 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~---~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~------~~~~~~~~~~~~~~~~~~i~~~~~ 107 (312)
+|++|++-| -+.... ...++..+++.+ +--|+++.+|-+|.|.+ ..-...+.++.++|+..+++....
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~--~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEF--GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHH--TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHc--CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 676666654 443332 133455566664 57899999999999953 122346889999999999988631
Q ss_pred ----cCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 108 ----NTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 108 ----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
..+.|++++|-|.||.+|.-+-.+||+.|.|.+..++++.
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 1345899999999999999999999999999998765544
No 157
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.37 E-value=8.6e-06 Score=66.42 Aligned_cols=110 Identities=18% Similarity=0.261 Sum_probs=68.2
Q ss_pred CceEEEEEcCCCCchhc---HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCc
Q 021479 36 PKLHVLFVPGNPGVITF---YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVP 112 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~---~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 112 (312)
..|+||++||+|-.... .-.++..+...+. ...++++|+--...-+.....+..+.+.++....+++. ...++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~---~G~~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVES---EGNKN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhc---cCCCe
Confidence 46999999998743222 2233444556666 66899999864431111111233344444444444433 34568
Q ss_pred EEEEeechHHHHHHHHHHhcc--c---cceEEEEeccccccc
Q 021479 113 IVLVGHSIGAYVALEMLKRSS--E---KVIYYIGLYPFLALI 149 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p--~---~v~~lvl~~p~~~~~ 149 (312)
++|+|-|.||.+++.+++... + .-+++||++|++...
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998875321 1 247999999987765
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.33 E-value=8.7e-06 Score=68.62 Aligned_cols=110 Identities=13% Similarity=0.000 Sum_probs=64.3
Q ss_pred CCceEEEEEcCCCCchh-cHHHHHHHHHHH-cCCCccEEEeccCCCc-cCccCCCCCcc-hHHHHHHHHHHHHHHhh--c
Q 021479 35 DPKLHVLFVPGNPGVIT-FYKDFVQSLYEH-LGGNASISAIGSAAQT-KKNYDHGRLFS-LDEQVEHKMDFIRQELQ--N 108 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~-~~~~~~~~l~~~-l~~~~~vi~~D~~G~G-~s~~~~~~~~~-~~~~~~~~~~~i~~~~~--~ 108 (312)
++.|+|+++||...... .....+..+... ...-.-++.+|..+.. ++. ....... ....+++++-+|++.+. .
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~-el~~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ-ELPCNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccc-cCCchHHHHHHHHHHHHHHHHHhCCCCC
Confidence 34689999999542111 112222223322 0011345677753211 111 1111112 23355777777777532 1
Q ss_pred CCCcEEEEeechHHHHHHHHHHhccccceEEEEeccc
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
..++.+|+|+||||..|+.++.++|+.+.+++.++|.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 2347899999999999999999999999999988863
No 159
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.29 E-value=0.00021 Score=60.31 Aligned_cols=131 Identities=11% Similarity=0.057 Sum_probs=80.7
Q ss_pred eeeeec---cccceeeeecC---CCCceEEEEEcCCCCchhcHHHHHHHHHHHc---------------CCCccEEEecc
Q 021479 17 RLSNVS---IYTAEVLEIEA---DDPKLHVLFVPGNPGVITFYKDFVQSLYEHL---------------GGNASISAIGS 75 (312)
Q Consensus 17 ~~~~~~---g~~~~~~~~~~---~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l---------------~~~~~vi~~D~ 75 (312)
-|+.++ +..+.|...++ +..+|.||.+-|+||++..- .++..+-+.. .+..+++-+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 466665 45565655555 23489999999999998764 3111111110 12367889999
Q ss_pred C-CCccCccCCCC--CcchHHHHHHHHHHHHHHh----hcCCCcEEEEeechHHHHHHHHHH----hc-----c-ccceE
Q 021479 76 A-AQTKKNYDHGR--LFSLDEQVEHKMDFIRQEL----QNTEVPIVLVGHSIGAYVALEMLK----RS-----S-EKVIY 138 (312)
Q Consensus 76 ~-G~G~s~~~~~~--~~~~~~~~~~~~~~i~~~~----~~~~~~~~lvGhS~Gg~ia~~~a~----~~-----p-~~v~~ 138 (312)
| |.|.|-..... ..+-+..++|...++...+ .-...+++|.|-|.+|...-.+|. .. | -.++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 8 88877422222 2344556677766666543 223468999999999976666553 22 1 35889
Q ss_pred EEEecccccc
Q 021479 139 YIGLYPFLAL 148 (312)
Q Consensus 139 lvl~~p~~~~ 148 (312)
+++=+|....
T Consensus 206 ~~IGNg~td~ 215 (454)
T KOG1282|consen 206 YAIGNGLTDP 215 (454)
T ss_pred EEecCcccCc
Confidence 8876765543
No 160
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.26 E-value=3.2e-06 Score=68.01 Aligned_cols=95 Identities=18% Similarity=0.171 Sum_probs=62.4
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCC--ccCccC---CC--CCcchHH---HHHHHHHHHHHH
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQ--TKKNYD---HG--RLFSLDE---QVEHKMDFIRQE 105 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~--G~s~~~---~~--~~~~~~~---~~~~~~~~i~~~ 105 (312)
..|+|++-||.+++...|..+...+++. ||-|.++|.||- |..+.. +. .+.-+-+ ++..+++.+.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~---Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASY---GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhC---ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 5789999999999999999977777777 999999999984 333211 10 1111222 222233332222
Q ss_pred -----hh-c-CCCcEEEEeechHHHHHHHHHHhcc
Q 021479 106 -----LQ-N-TEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 106 -----~~-~-~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+. . ...+|.++|||+||+.+++.+....
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 00 0 1248999999999999999986544
No 161
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.25 E-value=8.8e-05 Score=56.63 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=42.5
Q ss_pred EEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCcccccc-ccccchHHHHHHHHHHHH
Q 021479 246 IAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFC-CSEAGSAWVASHVAGLIK 304 (312)
Q Consensus 246 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~-~~~~~~~~v~~~v~~~l~ 304 (312)
++++.+++|..+|......+.+..|++++. ++ +||...+. +.+ ++.+.|.+-|+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~d----lfRR~I~d~L~ 364 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQD----LFRRAIVDGLD 364 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhch----HHHHHHHHHHH
Confidence 678889999999999999999999999999 66 89966654 334 55555555554
No 162
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.24 E-value=5.7e-06 Score=72.24 Aligned_cols=103 Identities=24% Similarity=0.230 Sum_probs=61.6
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHH-------------cCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEH-------------LGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIR 103 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~-------------l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~ 103 (312)
+-+|+|++|..|+-.+-+.++..-... ....|+..++|+-+-- ..-+..++.++++.+.+.|+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~----tAm~G~~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF----TAMHGHILLDQTEYVNDAIK 164 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh----hhhccHhHHHHHHHHHHHHH
Confidence 568999999999988877765554421 1224666677653210 11122356666665555544
Q ss_pred ---HHhhc-C------CCcEEEEeechHHHHHHHHHHh---ccccceEEEEec
Q 021479 104 ---QELQN-T------EVPIVLVGHSIGAYVALEMLKR---SSEKVIYYIGLY 143 (312)
Q Consensus 104 ---~~~~~-~------~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~ 143 (312)
.++.+ . .+.++|+||||||.+|...+.. .++.|+-++-++
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 33332 1 2349999999999999887753 234455555443
No 163
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.23 E-value=4.2e-06 Score=71.49 Aligned_cols=124 Identities=7% Similarity=-0.056 Sum_probs=83.4
Q ss_pred eccccceeeeecCC--CCceEEEEEcCCCCchh---cHHHHHHHHHH----HcCCCccEEEeccCCCccCccCCCCCcc-
Q 021479 21 VSIYTAEVLEIEAD--DPKLHVLFVPGNPGVIT---FYKDFVQSLYE----HLGGNASISAIGSAAQTKKNYDHGRLFS- 90 (312)
Q Consensus 21 ~~g~~~~~~~~~~~--~~~~~iv~~HG~~~~~~---~~~~~~~~l~~----~l~~~~~vi~~D~~G~G~s~~~~~~~~~- 90 (312)
-+|.++....+-++ ++.|+++..+-++-... .+.... ... ..+.||.|+..|.||.|.|++.-....+
T Consensus 27 RDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~--~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~ 104 (563)
T COG2936 27 RDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLS--ALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSR 104 (563)
T ss_pred cCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhh--cccccceeecCceEEEEecccccccCCcccceeccc
Confidence 37888877777664 66888888883332222 111100 111 1245999999999999999854433444
Q ss_pred hHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 91 LDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 91 ~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
=.++.-|++++|.+. +..+.+|..+|.|++|...+.+|+..|..++.++-.+++.+
T Consensus 105 E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 105 EAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 223445666666663 23566899999999999999999999988888887665444
No 164
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.22 E-value=7.7e-05 Score=56.22 Aligned_cols=79 Identities=20% Similarity=0.112 Sum_probs=53.3
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccE-EEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASI-SAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~v-i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
+..|||..|++.+...+.+ |. ++.++.| +++|+|---. +. + + ...+.++|
T Consensus 11 ~~LilfF~GWg~d~~~f~h----L~--~~~~~D~l~~yDYr~l~~-----------d~---~-------~--~~y~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSH----LI--LPENYDVLICYDYRDLDF-----------DF---D-------L--SGYREIYL 61 (213)
T ss_pred CeEEEEEecCCCChHHhhh----cc--CCCCccEEEEecCccccc-----------cc---c-------c--ccCceEEE
Confidence 4689999999999988776 42 2335555 5667753311 10 1 1 12347999
Q ss_pred EeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 116 VGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 116 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
||+|||-++|..+....| ++..|.++.+.
T Consensus 62 vAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 999999999988876654 67777777543
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.18 E-value=5.2e-05 Score=61.51 Aligned_cols=125 Identities=16% Similarity=0.053 Sum_probs=74.8
Q ss_pred eeeccccceeeeecC--CCCceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCC--CccCcc----------
Q 021479 19 SNVSIYTAEVLEIEA--DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAA--QTKKNY---------- 83 (312)
Q Consensus 19 ~~~~g~~~~~~~~~~--~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G--~G~s~~---------- 83 (312)
...++.++-.+..+. ..+...||++||.+.+.. |..++..|...|. .|+..+.+.+|. ......
T Consensus 67 L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d-~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~ 145 (310)
T PF12048_consen 67 LQAGEERFLALWRPANSAKPQGAVIILPDWGEHPD-WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPS 145 (310)
T ss_pred eecCCEEEEEEEecccCCCCceEEEEecCCCCCCC-cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCC
Confidence 344444444444433 455778999999998764 4455555666663 489999998887 111100
Q ss_pred C---CCCC-------------cchHHHHHHHH----HHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc-cceEEEEe
Q 021479 84 D---HGRL-------------FSLDEQVEHKM----DFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE-KVIYYIGL 142 (312)
Q Consensus 84 ~---~~~~-------------~~~~~~~~~~~----~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~ 142 (312)
. .... .....+.+.+. +.+.........+++|+||+.|+..++.|....+. .+.++|+|
T Consensus 146 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I 225 (310)
T PF12048_consen 146 AGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLI 225 (310)
T ss_pred CCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEE
Confidence 0 0000 01112222222 22222222234359999999999999999988774 58999998
Q ss_pred cc
Q 021479 143 YP 144 (312)
Q Consensus 143 ~p 144 (312)
+|
T Consensus 226 ~a 227 (310)
T PF12048_consen 226 NA 227 (310)
T ss_pred eC
Confidence 86
No 166
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.18 E-value=1e-05 Score=59.44 Aligned_cols=110 Identities=11% Similarity=0.142 Sum_probs=66.1
Q ss_pred CCceEEEEEcCCCCchhcHH--HHHHHHHHHcCCCccEEEeccCCCccC-----cc----------------CCCCCcch
Q 021479 35 DPKLHVLFVPGNPGVITFYK--DFVQSLYEHLGGNASISAIGSAAQTKK-----NY----------------DHGRLFSL 91 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~--~~~~~l~~~l~~~~~vi~~D~~G~G~s-----~~----------------~~~~~~~~ 91 (312)
++.|++.++.|+..+.+.+- ..+...+. ..++.|+++|---.|.. +. +....|.+
T Consensus 42 k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As--~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 42 KRCPVLFYLSGLTCTHENFIEKSGFQQQAS--KHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CcCceEEEecCCcccchhhHhhhhHHHhHh--hcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 34689999999998876552 22222322 24788899884322221 10 00011222
Q ss_pred HH-HHHHHHHHHHHH-hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 92 DE-QVEHKMDFIRQE-LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 92 ~~-~~~~~~~~i~~~-~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
.+ .++.+.+++..- .+-...++.+.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 22 223344444421 11112369999999999999999999999999988877744
No 167
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.14 E-value=1e-05 Score=70.82 Aligned_cols=108 Identities=11% Similarity=0.071 Sum_probs=63.1
Q ss_pred CCceEEEEEcCCCC---chhcHHHHHHHHHHHcCCCccEEEeccC----CCccCccC-CCCCcchHHHHHHHHHHHHHHh
Q 021479 35 DPKLHVLFVPGNPG---VITFYKDFVQSLYEHLGGNASISAIGSA----AQTKKNYD-HGRLFSLDEQVEHKMDFIRQEL 106 (312)
Q Consensus 35 ~~~~~iv~~HG~~~---~~~~~~~~~~~l~~~l~~~~~vi~~D~~----G~G~s~~~-~~~~~~~~~~~~~~~~~i~~~~ 106 (312)
++.|+||++||.+. +...+ ....++.... ++-|+.+++| |+..+... ......+.| ...++++++...
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D-~~~al~wv~~~i 168 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKD-QRLALKWVQDNI 168 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHH-HHHHHHHHHHHH
Confidence 45799999999642 22222 1122444322 4899999999 44433211 111223333 333344554432
Q ss_pred ---hcCCCcEEEEeechHHHHHHHHHHh--ccccceEEEEecccc
Q 021479 107 ---QNTEVPIVLVGHSIGAYVALEMLKR--SSEKVIYYIGLYPFL 146 (312)
Q Consensus 107 ---~~~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 146 (312)
.....+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 169 ~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 169 AAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 1223589999999999999888765 234688888876533
No 168
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.06 E-value=1.1e-05 Score=63.02 Aligned_cols=44 Identities=25% Similarity=0.343 Sum_probs=37.9
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccC
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKK 81 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s 81 (312)
++-|++||-||.+++...|..+.-.++.. ||-|.++..|-+...
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LASh---G~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASH---GFVVAAVEHRDRSAC 159 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhC---ceEEEEeecccCcce
Confidence 34589999999999999999988888877 999999999977644
No 169
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.04 E-value=1.2e-05 Score=67.48 Aligned_cols=85 Identities=15% Similarity=0.224 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHcCCCccE------EEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHH
Q 021479 52 FYKDFVQSLYEHLGGNASI------SAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVA 125 (312)
Q Consensus 52 ~~~~~~~~l~~~l~~~~~v------i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia 125 (312)
.|..++..|.+. ||.. .-+|+|= +. ...++....+.+.|+..+...+++++||||||||.++
T Consensus 66 ~~~~li~~L~~~---GY~~~~~l~~~pYDWR~---~~------~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKL---GYDRGKDLFAAPYDWRL---SP------AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhc---CcccCCEEEEEeechhh---ch------hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 688866666543 4332 2256652 11 1345666777777776543336799999999999999
Q ss_pred HHHHHhccc------cceEEEEecccccc
Q 021479 126 LEMLKRSSE------KVIYYIGLYPFLAL 148 (312)
Q Consensus 126 ~~~a~~~p~------~v~~lvl~~p~~~~ 148 (312)
..+....+. .|+++|.++++...
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 999988753 59999999865543
No 170
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.03 E-value=2.9e-05 Score=60.75 Aligned_cols=103 Identities=15% Similarity=0.171 Sum_probs=57.3
Q ss_pred eEEEEEcCCCCch---hcHHHHHHHHHHHcCCCccEEEeccCCCccC-ccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE
Q 021479 38 LHVLFVPGNPGVI---TFYKDFVQSLYEHLGGNASISAIGSAAQTKK-NYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI 113 (312)
Q Consensus 38 ~~iv~~HG~~~~~---~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 113 (312)
.+||+.||++.+. .....+...+.+.++ |--|.+++. |-+.+ +....-.-.+.+.++.+.+.+..- +....-+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~-p~L~~G~ 82 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLAND-PELANGF 82 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH--GGGTT-E
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhC-hhhhcce
Confidence 3589999999753 245554444444444 778888876 33321 111111234566666666666652 1233469
Q ss_pred EEEeechHHHHHHHHHHhccc-cceEEEEec
Q 021479 114 VLVGHSIGAYVALEMLKRSSE-KVIYYIGLY 143 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~ 143 (312)
+++|+|-||.++=.++.+.|+ .|+.+|.++
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 999999999999999999875 699999876
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.03 E-value=6.4e-05 Score=59.43 Aligned_cols=100 Identities=20% Similarity=0.252 Sum_probs=66.6
Q ss_pred ceEEEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 37 KLHVLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
..++|+.||+|.+... ...+.+ +++.++ |..+.++.. | .+. .....-.+.++++.+.+.+.. .+....-++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~-l~~~~~-g~~~~~i~i-g--~~~-~~s~~~~~~~Qve~vce~l~~-~~~l~~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQ-LLTNLS-GSPGFCLEI-G--NGV-GDSWLMPLTQQAEIACEKVKQ-MKELSQGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHH-HHHhCC-CCceEEEEE-C--CCc-cccceeCHHHHHHHHHHHHhh-chhhhCcEE
Confidence 3458999999876543 333333 334444 566666543 3 222 333455677777777776665 222334599
Q ss_pred EEeechHHHHHHHHHHhccc--cceEEEEec
Q 021479 115 LVGHSIGAYVALEMLKRSSE--KVIYYIGLY 143 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 143 (312)
++|+|.||.++=.++.+.|+ .|+.+|-++
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 99999999999999999987 599999876
No 172
>COG3150 Predicted esterase [General function prediction only]
Probab=98.02 E-value=2.7e-05 Score=55.09 Aligned_cols=89 Identities=12% Similarity=0.108 Sum_probs=61.5
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
||++||+.+++...+..+ +.+. +.-|.|-.+.+. +....+..+.++.+...|... .++...|||-|
T Consensus 2 ilYlHGFnSSP~shka~l--~~q~-------~~~~~~~i~y~~--p~l~h~p~~a~~ele~~i~~~---~~~~p~ivGss 67 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LLQF-------IDEDVRDIEYST--PHLPHDPQQALKELEKAVQEL---GDESPLIVGSS 67 (191)
T ss_pred eEEEecCCCCcccHHHHH--HHHH-------Hhccccceeeec--CCCCCCHHHHHHHHHHHHHHc---CCCCceEEeec
Confidence 899999999988876522 2233 223333344442 334557788888888888887 33469999999
Q ss_pred hHHHHHHHHHHhccccceEEEEeccc
Q 021479 120 IGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 120 ~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
+||..|..++.++. ++.++ ++|.
T Consensus 68 LGGY~At~l~~~~G--irav~-~NPa 90 (191)
T COG3150 68 LGGYYATWLGFLCG--IRAVV-FNPA 90 (191)
T ss_pred chHHHHHHHHHHhC--Chhhh-cCCC
Confidence 99999999999876 55544 5553
No 173
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.99 E-value=3.2e-05 Score=51.63 Aligned_cols=60 Identities=22% Similarity=0.249 Sum_probs=51.1
Q ss_pred cCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 242 NQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 242 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
-..|+|++.++.|+.+|.+.++.+++.++++.++ +++.||...... ..-+.+.+.+||.+
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGG----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCC----ChHHHHHHHHHHHc
Confidence 3589999999999999999999999999999988 999999887532 24677888888764
No 174
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.98 E-value=0.00013 Score=59.12 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=51.2
Q ss_pred hhhhhcC-CcEEEEeecCCCCCChhHHHHHHHhCCC--Ccee-ecCCCccccccccccchHHHHHHHHHHHHhhc
Q 021479 237 AFMRENQ-SKIAFLFGVDDHWGPQELYEEISEQVPD--VPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNKI 307 (312)
Q Consensus 237 ~~l~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~~ 307 (312)
..+..+. +|+++++|++|..+|......+.+.... .... +++++|...... .....+....+.+|+.+.+
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 4455565 7999999999999999999998886655 2344 788888777643 2223467777888887764
No 175
>PLN02606 palmitoyl-protein thioesterase
Probab=97.90 E-value=0.00013 Score=57.72 Aligned_cols=99 Identities=16% Similarity=0.166 Sum_probs=63.4
Q ss_pred eEEEEEcCCC--CchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 38 LHVLFVPGNP--GVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 38 ~~iv~~HG~~--~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
.+||+.||++ .+......+.+.+ +..+ ++-+.++- .|-+. ...-.-.+.++++.+.+.|.. .+...+-+++
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i-~~~~-~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~-~~~L~~G~na 99 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFL-INHS-GYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQ-MKELSEGYNI 99 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHH-HhCC-CCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhc-chhhcCceEE
Confidence 4589999999 4444566655444 3221 44443333 23221 122234566777776666655 2223446999
Q ss_pred EeechHHHHHHHHHHhccc--cceEEEEec
Q 021479 116 VGHSIGAYVALEMLKRSSE--KVIYYIGLY 143 (312)
Q Consensus 116 vGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 143 (312)
+|+|-||.++=.++.+.|+ .|+.+|-++
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlg 129 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLG 129 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEec
Confidence 9999999999999999887 599999776
No 176
>COG0627 Predicted esterase [General function prediction only]
Probab=97.90 E-value=3.6e-05 Score=62.11 Aligned_cols=114 Identities=10% Similarity=0.074 Sum_probs=68.3
Q ss_pred CCCceEEEEEcCCCCchhcHH--HHHHHHHHHcCCCccEEEec--------------cCCCccCcc------CCCC-Ccc
Q 021479 34 DDPKLHVLFVPGNPGVITFYK--DFVQSLYEHLGGNASISAIG--------------SAAQTKKNY------DHGR-LFS 90 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~--~~~~~l~~~l~~~~~vi~~D--------------~~G~G~s~~------~~~~-~~~ 90 (312)
+.+-|+++++||..++...+. .=+...+.. .+..++++| ..|-+.|-. +... .+.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~--~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADE--SGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhh--cCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 355789999999887742221 111112222 256666652 224333311 0111 255
Q ss_pred hHHH-HHHHHHHHHHHhhcCC--CcEEEEeechHHHHHHHHHHhccccceEEEEeccccccc
Q 021479 91 LDEQ-VEHKMDFIRQELQNTE--VPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLALI 149 (312)
Q Consensus 91 ~~~~-~~~~~~~i~~~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~ 149 (312)
++.. .+++-+.+++.+.... +...++||||||.=|+.+|.++|+++..+.-.+|++.+.
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 5553 3445545555432112 268999999999999999999999999999888876544
No 177
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.88 E-value=0.0013 Score=51.76 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=43.0
Q ss_pred hcCCcEEEEeecCCCCCChhHHHHHHHhC--CC--Ccee-ecCCCccccccccccchHHHHHHHHHH
Q 021479 241 ENQSKIAFLFGVDDHWGPQELYEEISEQV--PD--VPLA-IERHGHTHNFCCSEAGSAWVASHVAGL 302 (312)
Q Consensus 241 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~--~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~ 302 (312)
...+|-++++++.|.+++.+..+.+++.. .+ ++.+ +++++|..++-. ..++..+.+.+|
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~---~p~~Y~~~v~~f 239 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRK---HPDRYWRAVDEF 239 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhccc---CHHHHHHHHHhh
Confidence 44689999999999999999888877643 22 4445 788999777653 245777777665
No 178
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.85 E-value=0.0054 Score=47.94 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=72.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
.+.|.|+++-...|+ |..+++...+.|-....|+..|+-.--.-+ -....++++|+++.+++++..+ +. ..+
T Consensus 101 ~pdPkvLivapmsGH---~aTLLR~TV~alLp~~~vyitDW~dAr~Vp-~~~G~FdldDYIdyvie~~~~~--Gp--~~h 172 (415)
T COG4553 101 KPDPKVLIVAPMSGH---YATLLRGTVEALLPYHDVYITDWVDARMVP-LEAGHFDLDDYIDYVIEMINFL--GP--DAH 172 (415)
T ss_pred CCCCeEEEEeccccc---HHHHHHHHHHHhccccceeEeeccccceee-cccCCccHHHHHHHHHHHHHHh--CC--CCc
Confidence 345667777665543 445555567776668999999987654443 3445789999999999999998 33 477
Q ss_pred EEeechHH-----HHHHHHHHhccccceEEEEecccccc
Q 021479 115 LVGHSIGA-----YVALEMLKRSSEKVIYYIGLYPFLAL 148 (312)
Q Consensus 115 lvGhS~Gg-----~ia~~~a~~~p~~v~~lvl~~p~~~~ 148 (312)
+++.+.-+ .+++.-+...|..-..+++++..++.
T Consensus 173 v~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 173 VMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred EEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 77777544 44444555667777889988755543
No 179
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=0.00029 Score=54.10 Aligned_cols=99 Identities=21% Similarity=0.238 Sum_probs=70.5
Q ss_pred eEEEEEcCCCCchhc--HHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 38 LHVLFVPGNPGVITF--YKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~--~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
.++|++||++.+... ...+.+.+.+ ++ |..|+++|. |-| . .......+.++++.+.+.+.. .+...+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~~-g~~v~~lei-g~g--~-~~s~l~pl~~Qv~~~ce~v~~-m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-LP-GSPVYCLEI-GDG--I-KDSSLMPLWEQVDVACEKVKQ-MPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-CC-CCeeEEEEe-cCC--c-chhhhccHHHHHHHHHHHHhc-chhccCceEE
Confidence 458899999987766 6676666666 65 888999986 444 1 233344567777777666663 2234456999
Q ss_pred EeechHHHHHHHHHHhccc-cceEEEEec
Q 021479 116 VGHSIGAYVALEMLKRSSE-KVIYYIGLY 143 (312)
Q Consensus 116 vGhS~Gg~ia~~~a~~~p~-~v~~lvl~~ 143 (312)
+|.|.||.++-.++..-++ .|+.+|-++
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 9999999999988877654 588888765
No 180
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.67 E-value=0.00023 Score=58.00 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=78.8
Q ss_pred eEEEEEcCCCCchhcHH---HHHHHHHHHcCCCccEEEeccCCCccCccC---------CCCCcchHHHHHHHHHHHHHH
Q 021479 38 LHVLFVPGNPGVITFYK---DFVQSLYEHLGGNASISAIGSAAQTKKNYD---------HGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~---~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~~~~~~~i~~~ 105 (312)
.+|+|--|.-|+.+.|. .|+-.+++.+ +--++.++.|-+|+|.+= .-...+.++...|...+|..+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~--~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL--KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh--CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 56999999999877763 3444466665 467888999999998521 011235666777777777766
Q ss_pred hhc---CCCcEEEEeechHHHHHHHHHHhccccceEEEEe-ccccccc
Q 021479 106 LQN---TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGL-YPFLALI 149 (312)
Q Consensus 106 ~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~-~p~~~~~ 149 (312)
..+ ...+++.+|-|.||++|.-+=.+||..|.|.... +|.+...
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLYFE 206 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEeec
Confidence 322 3458999999999999999999999988776654 4554433
No 181
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.66 E-value=0.00072 Score=59.95 Aligned_cols=118 Identities=11% Similarity=0.031 Sum_probs=64.2
Q ss_pred ccccceeeeecCCC---CceEEEEEcCCCC---ch--hcHHHHHHHHHHHcCCCccEEEeccC----CCccCccCC-C-C
Q 021479 22 SIYTAEVLEIEADD---PKLHVLFVPGNPG---VI--TFYKDFVQSLYEHLGGNASISAIGSA----AQTKKNYDH-G-R 87 (312)
Q Consensus 22 ~g~~~~~~~~~~~~---~~~~iv~~HG~~~---~~--~~~~~~~~~l~~~l~~~~~vi~~D~~----G~G~s~~~~-~-~ 87 (312)
+.+.+.+....... +.|++|+|||.+. +. ..|.. ...+... +.-|+.+++| |+-.+.... . .
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~---~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASK---DVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHH---TSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCC---CEEEEEecccccccccccccccccCch
Confidence 34555555544432 4699999999653 22 23322 2223334 8999999999 554432111 1 3
Q ss_pred CcchHHHHHHHHHHHHHHhh---cCCCcEEEEeechHHHHHHHHHHhcc--ccceEEEEecc
Q 021479 88 LFSLDEQVEHKMDFIRQELQ---NTEVPIVLVGHSIGAYVALEMLKRSS--EKVIYYIGLYP 144 (312)
Q Consensus 88 ~~~~~~~~~~~~~~i~~~~~---~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~p 144 (312)
.+.+.|+... ++++++... +..++|.|+|||.||..+...+..-. ..++++|+.++
T Consensus 183 N~Gl~Dq~~A-L~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 183 NYGLLDQRLA-LKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp THHHHHHHHH-HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhhhhhHHH-HHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 4455555533 366665431 22358999999999998887766522 46999998875
No 182
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.66 E-value=0.0026 Score=52.45 Aligned_cols=64 Identities=9% Similarity=0.094 Sum_probs=50.0
Q ss_pred hhhhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCc-ee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 236 WAFMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVP-LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 236 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
+....++++|.++|.|.+|....+.....+.+.+|+.+ +. +|+++|.... ..+.+.+..|+...
T Consensus 255 ~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-------~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 255 YSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-------SDVVQSLRAFYNRI 320 (367)
T ss_pred HHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-------HHHHHHHHHHHHHH
Confidence 34556789999999999999999999999999999866 45 8999997655 24455566666554
No 183
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.62 E-value=0.00063 Score=57.87 Aligned_cols=113 Identities=13% Similarity=0.117 Sum_probs=69.7
Q ss_pred CCceEEEEEcCCCCchhcHHHH---HHHHH---------HHc-------CCCccEEEeccC-CCccCccCCCCCcc-hHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDF---VQSLY---------EHL-------GGNASISAIGSA-AQTKKNYDHGRLFS-LDE 93 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~---~~~l~---------~~l-------~~~~~vi~~D~~-G~G~s~~~~~~~~~-~~~ 93 (312)
...|+|+.+-|++|++..+--+ ...-. ..+ .+..+++-+|.| |.|.|........+ -.+
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 4479999999999988754221 11100 011 124889999966 99988532222111 123
Q ss_pred HHHHHHHHHHHHh---hc-CCCcEEEEeechHHHHHHHHHHh----c------cccceEEEEeccccc
Q 021479 94 QVEHKMDFIRQEL---QN-TEVPIVLVGHSIGAYVALEMLKR----S------SEKVIYYIGLYPFLA 147 (312)
Q Consensus 94 ~~~~~~~~i~~~~---~~-~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~p~~~ 147 (312)
.++++.+++...+ ++ ...+++|.|.|.||..+-.+|.. . +-.++|+++-+|...
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 4466666666643 11 34589999999999876666643 1 126889998777543
No 184
>PLN02209 serine carboxypeptidase
Probab=97.61 E-value=0.00057 Score=58.17 Aligned_cols=114 Identities=15% Similarity=0.208 Sum_probs=73.2
Q ss_pred CCceEEEEEcCCCCchhcHHHHHH---HHHH---------Hc-------CCCccEEEeccC-CCccCccCCC-CCcchHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQ---SLYE---------HL-------GGNASISAIGSA-AQTKKNYDHG-RLFSLDE 93 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~---~l~~---------~l-------~~~~~vi~~D~~-G~G~s~~~~~-~~~~~~~ 93 (312)
...|+|+++-|++|++..+-.+.. .... .+ .+..+++-+|.| |.|.|-.... ...+-++
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 145 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTS 145 (437)
T ss_pred CCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 347999999999999887643211 0000 01 124788999966 8888852222 2223345
Q ss_pred HHHHHHHHHHHHhhc----CCCcEEEEeechHHHHHHHHHHh----c------cccceEEEEecccccc
Q 021479 94 QVEHKMDFIRQELQN----TEVPIVLVGHSIGAYVALEMLKR----S------SEKVIYYIGLYPFLAL 148 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~----~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~p~~~~ 148 (312)
.++++.+++...+.. ...+++|.|.|.||..+-.+|.. . +-.++|+++.+|+...
T Consensus 146 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 146 EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 678888888775421 23489999999999876666643 1 1257899988876543
No 185
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.58 E-value=0.00036 Score=52.32 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCCCccEEEeccCCCccC-----ccCCC---CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHH
Q 021479 54 KDFVQSLYEHLGGNASISAIGSAAQTKK-----NYDHG---RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVA 125 (312)
Q Consensus 54 ~~~~~~l~~~l~~~~~vi~~D~~G~G~s-----~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia 125 (312)
+..+...+..+....+|+++=+|=.... ..... ......|..+....+|++. +.++|++|+|||.|+.+.
T Consensus 32 ~~~~~~qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~--n~GRPfILaGHSQGs~~l 109 (207)
T PF11288_consen 32 RGVVRNQASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY--NNGRPFILAGHSQGSMHL 109 (207)
T ss_pred HHHHHHHhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc--CCCCCEEEEEeChHHHHH
Confidence 4445555666666789999988732211 10111 1223445555566677776 566799999999999999
Q ss_pred HHHHHhc
Q 021479 126 LEMLKRS 132 (312)
Q Consensus 126 ~~~a~~~ 132 (312)
.++..++
T Consensus 110 ~~LL~e~ 116 (207)
T PF11288_consen 110 LRLLKEE 116 (207)
T ss_pred HHHHHHH
Confidence 9998765
No 186
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.56 E-value=0.00028 Score=51.13 Aligned_cols=52 Identities=13% Similarity=0.147 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHhccc----cceEEEEec
Q 021479 92 DEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKRSSE----KVIYYIGLY 143 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~ 143 (312)
......+...++.... ....+++++|||+||.+|..++..... .+..++.++
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg 64 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFG 64 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeC
Confidence 3344455555555421 134589999999999999999987764 455566554
No 187
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.53 E-value=0.00047 Score=57.93 Aligned_cols=116 Identities=16% Similarity=0.161 Sum_probs=65.9
Q ss_pred ccceeeeec-CCCCceEEEEEcCCC---Cchhc--HHHHHHHHHHHcCCC-ccEEEeccC----CCcc-CccC----CCC
Q 021479 24 YTAEVLEIE-ADDPKLHVLFVPGNP---GVITF--YKDFVQSLYEHLGGN-ASISAIGSA----AQTK-KNYD----HGR 87 (312)
Q Consensus 24 ~~~~~~~~~-~~~~~~~iv~~HG~~---~~~~~--~~~~~~~l~~~l~~~-~~vi~~D~~----G~G~-s~~~----~~~ 87 (312)
+.+.+.... +.++.|++|+|||.+ |+... |+. ..|++. | +-|+.+++| ||=. |... ...
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~---g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAAR---GDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccCh--HHHHhc---CCEEEEEeCcccccceeeehhhccccccccc
Confidence 333444433 334579999999964 33332 443 234444 5 888889988 3211 1101 111
Q ss_pred CcchHHHH---HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc---ccceEEEEecccc
Q 021479 88 LFSLDEQV---EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS---EKVIYYIGLYPFL 146 (312)
Q Consensus 88 ~~~~~~~~---~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~p~~ 146 (312)
...+.|.+ +.+.+-|+++ .+..++|.|+|+|.||+.++.+++. | ..++++|+.+|..
T Consensus 155 n~Gl~DqilALkWV~~NIe~F-GGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAF-GGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHh-CCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 23444443 3334444554 2234589999999999988877664 4 3577778777543
No 188
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.53 E-value=0.00027 Score=58.81 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=53.3
Q ss_pred hcHHHHHHHHHHHcCCCcc------EEEeccC-CCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCcEEEEeechHH
Q 021479 51 TFYKDFVQSLYEHLGGNAS------ISAIGSA-AQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGA 122 (312)
Q Consensus 51 ~~~~~~~~~l~~~l~~~~~------vi~~D~~-G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg 122 (312)
..|+.+++.++.. ||. -..+|+| ++-. ....+++...+...|+..+. ..++|++||+|||||
T Consensus 124 ~~w~~~i~~lv~~---GYe~~~~l~ga~YDwRls~~~-------~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~ 193 (473)
T KOG2369|consen 124 WYWHELIENLVGI---GYERGKTLFGAPYDWRLSYHN-------SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGG 193 (473)
T ss_pred HHHHHHHHHHHhh---CcccCceeeccccchhhccCC-------hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCcc
Confidence 3567755555554 555 3456665 2211 22345666666666666432 344699999999999
Q ss_pred HHHHHHHHhccc--------cceEEEEec
Q 021479 123 YVALEMLKRSSE--------KVIYYIGLY 143 (312)
Q Consensus 123 ~ia~~~a~~~p~--------~v~~lvl~~ 143 (312)
.+.+.+...+++ -+++++-++
T Consensus 194 l~~lyFl~w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 194 LYVLYFLKWVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred HHHHHHHhcccccchhHHHHHHHHHHccC
Confidence 999999988876 255666554
No 189
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.50 E-value=0.00036 Score=58.69 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=69.9
Q ss_pred CceEEEEEcCCCCchhcHHHHHHH----HHHH-----------cCCCccEEEeccC-CCccCcc-CCCC---CcchHHHH
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQS----LYEH-----------LGGNASISAIGSA-AQTKKNY-DHGR---LFSLDEQV 95 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~----l~~~-----------l~~~~~vi~~D~~-G~G~s~~-~~~~---~~~~~~~~ 95 (312)
++|+|+.+.|++|++..|-.+... +... ....-.++-+|+| |.|.|.. .... .....+++
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 489999999999999987763111 0000 0113578999965 8888863 1122 23344445
Q ss_pred HHHHHHHHHHhh---cCCCcEEEEeechHHHHHHHHHHhccc---cceEEEEeccccc
Q 021479 96 EHKMDFIRQELQ---NTEVPIVLVGHSIGAYVALEMLKRSSE---KVIYYIGLYPFLA 147 (312)
Q Consensus 96 ~~~~~~i~~~~~---~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~ 147 (312)
..+.+++-..+. ....+.+|+|-|+||.-+-.+|...-+ ..++++++.+.+.
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 444444333221 233489999999999999888865544 3677777765443
No 190
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.41 E-value=0.0004 Score=59.89 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=55.7
Q ss_pred cHHHHHHHHHHHcCCCccEEEeccCCCccCccCC-CCCcchHHHHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHH
Q 021479 52 FYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDH-GRLFSLDEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 52 ~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a 129 (312)
.|..+++.|++. ||. --|+.|........ .....-+++...+.+.|+..+. +.+++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~i---GY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARI---GYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHc---CCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 457766666655 665 34554444332111 1112234555566666665432 3356999999999999999987
Q ss_pred Hhcc---------------ccceEEEEecccccc
Q 021479 130 KRSS---------------EKVIYYIGLYPFLAL 148 (312)
Q Consensus 130 ~~~p---------------~~v~~lvl~~p~~~~ 148 (312)
..-. ..|++.|.++|+...
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 6321 248889998865443
No 191
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.41 E-value=0.0038 Score=46.37 Aligned_cols=105 Identities=12% Similarity=0.162 Sum_probs=58.3
Q ss_pred CCceEEEEEcCCCCc-hhcHHH------------HHHHHHHHcCCCccEEEeccCC---CccCc-cCCCCCcchHHHHHH
Q 021479 35 DPKLHVLFVPGNPGV-ITFYKD------------FVQSLYEHLGGNASISAIGSAA---QTKKN-YDHGRLFSLDEQVEH 97 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~-~~~~~~------------~~~~l~~~l~~~~~vi~~D~~G---~G~s~-~~~~~~~~~~~~~~~ 97 (312)
.+...+|+|||.|-- +.+|.+ .+..+......||.|+..+.-- +-.+. .+.....+-.+.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 456689999998743 334532 1112222333489999887431 11111 011112233333333
Q ss_pred HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--cceEEEE
Q 021479 98 KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--KVIYYIG 141 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 141 (312)
+-..+-. +.....++++.||.||...+.+..+.|+ +|.++.|
T Consensus 179 vw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aial 222 (297)
T KOG3967|consen 179 VWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIAL 222 (297)
T ss_pred HHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEe
Confidence 3222222 1334579999999999999999999985 4555554
No 192
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.40 E-value=0.0022 Score=55.13 Aligned_cols=125 Identities=11% Similarity=0.102 Sum_probs=81.5
Q ss_pred eeeccccceeeeecC---CCCceEEEEEcCCCCch--hcHHHHHHHHHHHcCCCccEEEeccCCCccCcc-------CCC
Q 021479 19 SNVSIYTAEVLEIEA---DDPKLHVLFVPGNPGVI--TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNY-------DHG 86 (312)
Q Consensus 19 ~~~~g~~~~~~~~~~---~~~~~~iv~~HG~~~~~--~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~-------~~~ 86 (312)
.+-+|.++.|+.... .++.|++|+--|.-.-+ -.|......+.++ |...+..+.||-|+-.. ..+
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLer---Gg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLER---GGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhc---CCeEEEEecccCCccCHHHHHHHhhhc
Confidence 345788898888852 22577777666543322 1344444555555 88888999999886531 122
Q ss_pred CCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 87 RLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 87 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
....++|.+.-+.++++.-+. ..+++.+-|-|-||.+.-....++|+.+.++|.--|.++
T Consensus 477 rq~vfdDf~AVaedLi~rgit-spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGIT-SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred chhhhHHHHHHHHHHHHhCCC-CHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 233455555544444444221 234799999999999999999999999988886666543
No 193
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.36 E-value=0.00039 Score=53.86 Aligned_cols=50 Identities=22% Similarity=0.270 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccc
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
+++.-+|++.+.-..++-.++|||+||.+++.....+|+.+....+++|.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 34444555533223346999999999999999999999999999998873
No 194
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.35 E-value=0.0026 Score=48.83 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=58.8
Q ss_pred CCCceEEEEEcCCC--Cch-hcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHH-------HHHHHH
Q 021479 34 DDPKLHVLFVPGNP--GVI-TFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEH-------KMDFIR 103 (312)
Q Consensus 34 ~~~~~~iv~~HG~~--~~~-~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~-------~~~~i~ 103 (312)
.+|+.+|-|+-|.. ..+ -.|+.+++.+++. ||.|++.=+.- | ++-...+.. +.+.+.
T Consensus 14 ~~P~gvihFiGGaf~ga~P~itYr~lLe~La~~---Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~~L~ 80 (250)
T PF07082_consen 14 PRPKGVIHFIGGAFVGAAPQITYRYLLERLADR---GYAVIATPYVV-T---------FDHQAIAREVWERFERCLRALQ 80 (250)
T ss_pred CCCCEEEEEcCcceeccCcHHHHHHHHHHHHhC---CcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHHHHH
Confidence 35677787877743 222 3588877777766 99999875421 1 111222222 222222
Q ss_pred HHhh--cCCCcEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 104 QELQ--NTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 104 ~~~~--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
.... ...-|++-+|||+||-+-+.+...++..-++-++++
T Consensus 81 ~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 81 KRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 2100 011378999999999999998888775557777765
No 195
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.32 E-value=0.00083 Score=47.84 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=20.3
Q ss_pred CCcEEEEeechHHHHHHHHHHhcc
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+.++++.|||+||.+|..++....
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhh
Confidence 357999999999999999886543
No 196
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.27 E-value=0.00094 Score=52.56 Aligned_cols=112 Identities=13% Similarity=0.017 Sum_probs=63.8
Q ss_pred CCceEEEEEcCCC--CchhcHHHHHHHHHHHcCCCccEEEeccCCCccCcc-CCCCCcchHHHHHHHHHHHHHHhh--cC
Q 021479 35 DPKLHVLFVPGNP--GVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNY-DHGRLFSLDEQVEHKMDFIRQELQ--NT 109 (312)
Q Consensus 35 ~~~~~iv~~HG~~--~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~-~~~~~~~~~~~~~~~~~~i~~~~~--~~ 109 (312)
.+.|++++.||-- .+...+..+-..+.+..-..-.++.+|.----.... -..........+++++=++++.++ ..
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 4478999999832 122223332223333322345556665432100000 011112334455555556666432 12
Q ss_pred CCcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
...-+|.|.|+||.+++..+..+|+.+-.++..+|..
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 3357899999999999999999999999999777643
No 197
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.26 E-value=0.0024 Score=49.79 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHhcc-----ccceEEEEeccc
Q 021479 91 LDEQVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKRSS-----EKVIYYIGLYPF 145 (312)
Q Consensus 91 ~~~~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~p~ 145 (312)
+....+++...+..... ..+.++++.|||+||.+|..++.... ..+..+.+-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 34444444554444321 23458999999999999999887543 345555544443
No 198
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.17 E-value=0.0059 Score=50.51 Aligned_cols=30 Identities=27% Similarity=0.261 Sum_probs=28.1
Q ss_pred CcEEEEeechHHHHHHHHHHhccccceEEE
Q 021479 111 VPIVLVGHSIGAYVALEMLKRSSEKVIYYI 140 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 140 (312)
-|++++|+|.||.+|...|.-.|-.+.+++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~i 213 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVI 213 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEE
Confidence 389999999999999999999999999888
No 199
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.15 E-value=0.0013 Score=50.62 Aligned_cols=45 Identities=13% Similarity=0.229 Sum_probs=31.2
Q ss_pred HHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc----ccceEEEEec
Q 021479 99 MDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS----EKVIYYIGLY 143 (312)
Q Consensus 99 ~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~ 143 (312)
.++++......+.++++.|||.||.+|...|...+ ++|.++....
T Consensus 72 ~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fD 120 (224)
T PF11187_consen 72 LAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFD 120 (224)
T ss_pred HHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEee
Confidence 34444433223447999999999999999988743 4677777543
No 200
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.13 E-value=0.012 Score=43.74 Aligned_cols=103 Identities=20% Similarity=0.226 Sum_probs=56.8
Q ss_pred eEEEEEcCCCCchhc---HHHHHHHHHHHcC-CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCc
Q 021479 38 LHVLFVPGNPGVITF---YKDFVQSLYEHLG-GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVP 112 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~---~~~~~~~l~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~ 112 (312)
..||+..|.+..... -..+...+..... ....+..+++|-..... ....+..+=+..+...|+.... ..+.+
T Consensus 6 v~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~k 82 (179)
T PF01083_consen 6 VHVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTK 82 (179)
T ss_dssp EEEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSE
T ss_pred EEEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCC
Confidence 346677776654332 2233334444432 23556667776432221 1222444555556666654321 34568
Q ss_pred EEEEeechHHHHHHHHHHh------ccccceEEEEec
Q 021479 113 IVLVGHSIGAYVALEMLKR------SSEKVIYYIGLY 143 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~ 143 (312)
++|+|+|.||.++..++.. ..++|.++++++
T Consensus 83 ivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp EEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred EEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 9999999999999999877 235799999876
No 201
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.08 E-value=0.067 Score=50.39 Aligned_cols=94 Identities=26% Similarity=0.203 Sum_probs=68.8
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
+..|+++|+|-.-|.....+. ++..|. .|.||.--...-...++++.+...+.-+++. +...|+.
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~----la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkv--QP~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALES----LASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKV--QPEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchHHHHH----HHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhc--CCCCCee
Confidence 446789999999988877777 666542 3555544323444567888888888888887 5667999
Q ss_pred EEeechHHHHHHHHHHhccc--cceEEEEec
Q 021479 115 LVGHSIGAYVALEMLKRSSE--KVIYYIGLY 143 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 143 (312)
|+|+|+|+.++.++|....+ ....+|++.
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 99999999999999965442 345577764
No 202
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.94 E-value=0.044 Score=40.39 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=63.0
Q ss_pred ceEEEEEcCCCCchhcHH--------HHHHHHHHH---cCCCccEEEeccCCCccCccC---CCCCcchHHHHHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYK--------DFVQSLYEH---LGGNASISAIGSAAQTKKNYD---HGRLFSLDEQVEHKMDFI 102 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~--------~~~~~l~~~---l~~~~~vi~~D~~G~G~s~~~---~~~~~~~~~~~~~~~~~i 102 (312)
+-+.++++|.+.+..... .+...+... ...+-++-++-|.||-.-... .....--++-+.++..|+
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~ 98 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFL 98 (177)
T ss_pred CeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHH
Confidence 567899999887654321 111112221 222346666666665322100 111112244556666776
Q ss_pred HHHhh--cCCCcEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 103 RQELQ--NTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 103 ~~~~~--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
+.+.. ....++.++|||+|+.++-..+...+..+..+|++.
T Consensus 99 ~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~G 141 (177)
T PF06259_consen 99 DGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVG 141 (177)
T ss_pred HHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEEC
Confidence 66521 134589999999999999988888677899999875
No 203
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.89 E-value=0.009 Score=50.40 Aligned_cols=108 Identities=9% Similarity=-0.001 Sum_probs=76.0
Q ss_pred CCceEEEEEcCCCCchhcH----HHHHHHHHHHcCCCccEEEeccCCCccCccCC------CCCcchHHHHHHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFY----KDFVQSLYEHLGGNASISAIGSAAQTKKNYDH------GRLFSLDEQVEHKMDFIRQ 104 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~----~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~------~~~~~~~~~~~~~~~~i~~ 104 (312)
...|..|||-|=+.....| ...+..+++.+ |-.|+-+++|-+|.|.+.. -...+..+...|+.++|++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 4467788887755444333 11122244443 6899999999999885311 1234677888999999988
Q ss_pred Hhh--cCC--CcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 105 ELQ--NTE--VPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 105 ~~~--~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
... +.. .|++.+|-|.-|.++.-+=.++|+.+.|-|..+.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 521 112 3899999999999999999999999988887553
No 204
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.86 E-value=0.0023 Score=43.15 Aligned_cols=42 Identities=10% Similarity=0.205 Sum_probs=26.0
Q ss_pred ccceeeeeccccceeeeecCCC-CceEEEEEcCCCCchhcHHH
Q 021479 14 VNLRLSNVSIYTAEVLEIEADD-PKLHVLFVPGNPGVITFYKD 55 (312)
Q Consensus 14 ~~~~~~~~~g~~~~~~~~~~~~-~~~~iv~~HG~~~~~~~~~~ 55 (312)
...-.++++|.++++++..+.+ +..+|||+||++|+--.|.+
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHH
T ss_pred CCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHh
Confidence 3444567889999999988754 46789999999999877665
No 205
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.72 E-value=0.0035 Score=54.58 Aligned_cols=110 Identities=12% Similarity=0.121 Sum_probs=77.4
Q ss_pred CCCceEEEEEcCCCCchh--cHHHHHHHHHHHcCCCccEEEeccCCCccCcc-------CCCCCcchHHHHHHHHHHHHH
Q 021479 34 DDPKLHVLFVPGNPGVIT--FYKDFVQSLYEHLGGNASISAIGSAAQTKKNY-------DHGRLFSLDEQVEHKMDFIRQ 104 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~--~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~-------~~~~~~~~~~~~~~~~~~i~~ 104 (312)
.++.|.+|..=|.-|... .|.. .-...+..|+-......||-|.-.. ......++.|.++....+++.
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~---~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSI---ARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCCcEEEEEeccccccCCcCccc---ceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHc
Confidence 456788888887665432 2222 1223334477666677788775421 223356888888888787777
Q ss_pred HhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 105 ELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 105 ~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
-+. ..+.++++|-|.||++.-..+.+.|+.++++|+-.|++.
T Consensus 522 g~~-~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 522 GYT-SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred CcC-CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 533 234799999999999999999999999999999888765
No 206
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.57 E-value=0.0034 Score=37.33 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=20.5
Q ss_pred eeeeccccceeeeecCCC-------CceEEEEEcCCCCchhcH
Q 021479 18 LSNVSIYTAEVLEIEADD-------PKLHVLFVPGNPGVITFY 53 (312)
Q Consensus 18 ~~~~~g~~~~~~~~~~~~-------~~~~iv~~HG~~~~~~~~ 53 (312)
..+-+|+-+.+..+...+ ++|+|+|.||+.+++..|
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 344567777777666544 589999999999999887
No 207
>PLN02454 triacylglycerol lipase
Probab=96.56 E-value=0.0077 Score=50.24 Aligned_cols=20 Identities=45% Similarity=0.519 Sum_probs=18.0
Q ss_pred cEEEEeechHHHHHHHHHHh
Q 021479 112 PIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~ 131 (312)
++++.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999999854
No 208
>PLN02571 triacylglycerol lipase
Probab=96.48 E-value=0.0077 Score=50.28 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHh
Q 021479 93 EQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 93 ~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
+..+++..+++.. +....++++.|||+||.+|+..|..
T Consensus 209 qvl~eV~~L~~~y-~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKY-KDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhc-CcccccEEEeccchHHHHHHHHHHH
Confidence 3445555555543 1112269999999999999998865
No 209
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.35 E-value=0.22 Score=35.49 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=53.7
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccE-EEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASI-SAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~v-i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
.-.||++-|++..+..... +. +++.+.+ +++|+...... +++. .-+.+.|
T Consensus 11 d~LIvyFaGwgtpps~v~H----Li--lpeN~dl~lcYDY~dl~ld-------fDfs----------------Ay~hirl 61 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNH----LI--LPENHDLLLCYDYQDLNLD-------FDFS----------------AYRHIRL 61 (214)
T ss_pred CEEEEEEecCCCCHHHHhh----cc--CCCCCcEEEEeehhhcCcc-------cchh----------------hhhhhhh
Confidence 4478999999999888766 33 3445554 67887654322 1110 1125889
Q ss_pred EeechHHHHHHHHHHhccccceEEEEeccc
Q 021479 116 VGHSIGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 116 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
|.+|||-.+|-+.....+ ++..+.++.+
T Consensus 62 vAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 62 VAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 999999999999998876 6777777644
No 210
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.31 E-value=0.048 Score=45.00 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=60.8
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCcEE
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVPIV 114 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~ 114 (312)
....-||+.|=+|....=+.+..++.+. |+.|+.+|-.-|--|. .+.++.++|+..+++.+.. -...++.
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~---gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~ 329 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQ---GVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVL 329 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHC---CCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEE
Confidence 3556788888888666556655555555 9999999955443332 3567777777777766421 2345899
Q ss_pred EEeechHHHHHHHHHHhccc
Q 021479 115 LVGHSIGAYVALEMLKRSSE 134 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~ 134 (312)
|+|+|+|+=+--..-.+.|.
T Consensus 330 liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 330 LIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred EEeecccchhhHHHHHhCCH
Confidence 99999999876655555553
No 211
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.23 E-value=0.0043 Score=53.79 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=71.6
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHH-HHHHcCCCccEEEeccCCCccC---ccCCC----CCcchHHHHHHHHHHHHHH
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQS-LYEHLGGNASISAIGSAAQTKK---NYDHG----RLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~-l~~~l~~~~~vi~~D~~G~G~s---~~~~~----~~~~~~~~~~~~~~~i~~~ 105 (312)
.+++|.+|..+|.-+-. ..+.+.. -...+..|+-....|.||-|+- ....+ ...+++|.+.-+..+++.-
T Consensus 467 dg~~P~LLygYGay~is--l~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGIS--LDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred cCCCceEEEEeccccee--eccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 34678777777654422 1111111 1112234787888899987753 22222 2446777776666666654
Q ss_pred hhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEeccccc
Q 021479 106 LQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 106 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 147 (312)
+-+ ..+..+.|.|.||.++.....++|+.+..+|+-.|+++
T Consensus 545 yt~-~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 545 YTQ-PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred CCC-ccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 332 34899999999999999999999999999997776554
No 212
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.11 E-value=0.04 Score=49.15 Aligned_cols=105 Identities=14% Similarity=0.047 Sum_probs=55.2
Q ss_pred ceEEEEEcCCCCchh---cHHHHHHHHHHHcCCCccEEEeccC----CCccCcc-CCCCCcchHHHHHHH---HHHHHHH
Q 021479 37 KLHVLFVPGNPGVIT---FYKDFVQSLYEHLGGNASISAIGSA----AQTKKNY-DHGRLFSLDEQVEHK---MDFIRQE 105 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~---~~~~~~~~l~~~l~~~~~vi~~D~~----G~G~s~~-~~~~~~~~~~~~~~~---~~~i~~~ 105 (312)
.|++|++||.+-... .+..... -.-...++.-|+.+.+| |+..... .....+.+.|++..+ .+.|...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~-~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISP-AYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCc-hhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 699999999764222 2211111 11111224667777777 4433321 112344455444333 3333333
Q ss_pred hhcCCCcEEEEeechHHHHHHHHHHhcc--ccceEEEEec
Q 021479 106 LQNTEVPIVLVGHSIGAYVALEMLKRSS--EKVIYYIGLY 143 (312)
Q Consensus 106 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~ 143 (312)
.+..++|.|+|||.||..+..+...-. ..+.++|..+
T Consensus 191 -GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 191 -GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMS 229 (545)
T ss_pred -CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhc
Confidence 223458999999999998877664321 3455555443
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.06 E-value=0.01 Score=48.85 Aligned_cols=88 Identities=20% Similarity=0.294 Sum_probs=47.0
Q ss_pred CCCceEEEEEcCCCC-chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccC--CCCCcchHHHHHHHHHHHHHHhhcCC
Q 021479 34 DDPKLHVLFVPGNPG-VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD--HGRLFSLDEQVEHKMDFIRQELQNTE 110 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~-~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~ 110 (312)
.+++-.+|+.||+-+ +...|..-+........ +. .+..+|+-..... .+...==...++++.+.+... .+.
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p-~~---~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~--si~ 150 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMP-DK---LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY--SIE 150 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCC-cc---eEeeeccccchhhccccceeeecccHHHHhhhhhcc--ccc
Confidence 345678999999888 56666663333333322 33 3333433222111 111111123444455544444 344
Q ss_pred CcEEEEeechHHHHHHHH
Q 021479 111 VPIVLVGHSIGAYVALEM 128 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~ 128 (312)
++..+|||+||.++..+
T Consensus 151 -kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 151 -KISFVGHSLGGLVARYA 167 (405)
T ss_pred -eeeeeeeecCCeeeeEE
Confidence 89999999999876543
No 214
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.97 E-value=0.038 Score=45.38 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=52.2
Q ss_pred ccEEEeccC-CCccCccCCCCCc-chHHHHHHHHHHHHHHhh----cCCCcEEEEeechHHHHHHHHHHhc---------
Q 021479 68 ASISAIGSA-AQTKKNYDHGRLF-SLDEQVEHKMDFIRQELQ----NTEVPIVLVGHSIGAYVALEMLKRS--------- 132 (312)
Q Consensus 68 ~~vi~~D~~-G~G~s~~~~~~~~-~~~~~~~~~~~~i~~~~~----~~~~~~~lvGhS~Gg~ia~~~a~~~--------- 132 (312)
.+++-+|.| |.|.|-......+ +=+..++++..++..++. -.+.+++|.|-|.||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999999 9998853222222 222345777777776432 1345899999999998777666432
Q ss_pred -cccceEEEEeccccc
Q 021479 133 -SEKVIYYIGLYPFLA 147 (312)
Q Consensus 133 -p~~v~~lvl~~p~~~ 147 (312)
+-.++|+++-+|+..
T Consensus 82 ~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 82 PPINLQGYMLGNPVTY 97 (319)
T ss_pred CceeeeEEEeCCCCCC
Confidence 125788887776554
No 215
>PLN00413 triacylglycerol lipase
Probab=95.93 E-value=0.015 Score=49.21 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHH
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
..+.+.++++.. .+.++++.|||+||.+|..+|.
T Consensus 270 i~~~Lk~ll~~~---p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQN---PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHC---CCCeEEEEecCHHHHHHHHHHH
Confidence 444555555543 3458999999999999999885
No 216
>PLN02162 triacylglycerol lipase
Probab=95.85 E-value=0.015 Score=49.06 Aligned_cols=22 Identities=27% Similarity=0.459 Sum_probs=18.8
Q ss_pred CCCcEEEEeechHHHHHHHHHH
Q 021479 109 TEVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
.+.++++.|||+||.+|+.+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 3458999999999999999865
No 217
>PLN02408 phospholipase A1
Probab=95.79 E-value=0.017 Score=47.57 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+.+..+++.. +....++++.|||+||.+|+..|....
T Consensus 186 ~eI~~ll~~y-~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 186 EEIARLLQSY-GDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHhc-CCCCceEEEeccchHHHHHHHHHHHHH
Confidence 4444444443 111225999999999999999886543
No 218
>PLN02934 triacylglycerol lipase
Probab=95.58 E-value=0.022 Score=48.66 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHH
Q 021479 95 VEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
...+.++++.. .+.++++.|||+||.+|..+|.
T Consensus 308 ~~~lk~ll~~~---p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 308 RSKLKSLLKEH---KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHC---CCCeEEEeccccHHHHHHHHHH
Confidence 33344444443 3458999999999999999874
No 219
>PLN02324 triacylglycerol lipase
Probab=95.56 E-value=0.044 Score=45.86 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHh
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
+.+..+++.. +.....+++.|||+||.+|+..|..
T Consensus 201 ~eV~~L~~~Y-p~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 201 GELKRLLELY-KNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHC-CCCCceEEEecCcHHHHHHHHHHHH
Confidence 3344444443 2112369999999999999998854
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.55 E-value=0.047 Score=44.85 Aligned_cols=36 Identities=36% Similarity=0.427 Sum_probs=28.8
Q ss_pred CCCcEEEEeechHHHHHHHHHHhcccc-----ceEEEEecc
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSEK-----VIYYIGLYP 144 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvl~~p 144 (312)
..+|+.|||||+|+.+....+....++ |+.++|++.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 456899999999999999877665543 788888763
No 221
>PLN02310 triacylglycerol lipase
Probab=95.50 E-value=0.028 Score=46.93 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHh
Q 021479 94 QVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 94 ~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
..+.+..+++.+.. +...++++.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 33444444444311 122379999999999999998854
No 222
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.38 E-value=0.077 Score=42.36 Aligned_cols=109 Identities=12% Similarity=0.129 Sum_probs=71.1
Q ss_pred CCceEEEEEcCCCCchhc----HHHHHHHHHHHcC-------CCccEEEeccC-CCccCccC--CCCCcchHHHHHHHHH
Q 021479 35 DPKLHVLFVPGNPGVITF----YKDFVQSLYEHLG-------GNASISAIGSA-AQTKKNYD--HGRLFSLDEQVEHKMD 100 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~----~~~~~~~l~~~l~-------~~~~vi~~D~~-G~G~s~~~--~~~~~~~~~~~~~~~~ 100 (312)
..+|..+.+.|.++.+.. |+.+-+. --.++ +.-.++.+|-| |.|.|-.. .....+..+.+.|+.+
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl-~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPL-DLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCc-ccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 447888999998875532 2321111 00010 24678889988 88888422 2234467889999999
Q ss_pred HHHHHhhc----CCCcEEEEeechHHHHHHHHHHhccc---------cceEEEEecc
Q 021479 101 FIRQELQN----TEVPIVLVGHSIGAYVALEMLKRSSE---------KVIYYIGLYP 144 (312)
Q Consensus 101 ~i~~~~~~----~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~p 144 (312)
+++.++.. ...|++|+.-|.||-+|..++...-+ .+.+++|=.+
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 99987532 23589999999999999998865432 3566666333
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.30 E-value=0.033 Score=47.78 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhh-cCCCcEEEEeechHHHHHHHHHHh
Q 021479 94 QVEHKMDFIRQELQ-NTEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 94 ~~~~~~~~i~~~~~-~~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
..+++..+++.+.. ....++++.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34455555554311 112369999999999999998854
No 224
>PLN02802 triacylglycerol lipase
Probab=95.28 E-value=0.03 Score=47.87 Aligned_cols=21 Identities=38% Similarity=0.559 Sum_probs=18.6
Q ss_pred cEEEEeechHHHHHHHHHHhc
Q 021479 112 PIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
.+++.|||+||.+|+..|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 699999999999999988654
No 225
>PLN02753 triacylglycerol lipase
Probab=95.26 E-value=0.035 Score=47.72 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.7
Q ss_pred CcEEEEeechHHHHHHHHHHh
Q 021479 111 VPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
.++++.|||+||.+|+..|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999998853
No 226
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.09 E-value=0.053 Score=45.01 Aligned_cols=107 Identities=10% Similarity=0.037 Sum_probs=77.9
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCC--CcchHHHHHHHHHHHHHHhhcCCC
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGR--LFSLDEQVEHKMDFIRQELQNTEV 111 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~ 111 (312)
+..+|+|+.--|.+.+..-... .+...| +-+-+.+.+|-+|.|.+.+.+ ..++.+.+.|...+++.+..--..
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~---Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRS---EPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCcccccCcccc---chhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 4457888888887765432211 133333 467899999999999744333 457888888888777775432345
Q ss_pred cEEEEeechHHHHHHHHHHhccccceEEEE-eccc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEKVIYYIG-LYPF 145 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl-~~p~ 145 (312)
+.+--|-|=||+.++.+=.-||+-|.+.|. ++|.
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 899999999999999999999999998886 4553
No 227
>PLN02847 triacylglycerol lipase
Probab=94.79 E-value=0.4 Score=42.17 Aligned_cols=22 Identities=32% Similarity=0.407 Sum_probs=19.0
Q ss_pred CCcEEEEeechHHHHHHHHHHh
Q 021479 110 EVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
+-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3479999999999999988754
No 228
>PLN02719 triacylglycerol lipase
Probab=94.77 E-value=0.074 Score=45.66 Aligned_cols=20 Identities=30% Similarity=0.449 Sum_probs=18.2
Q ss_pred cEEEEeechHHHHHHHHHHh
Q 021479 112 PIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~ 131 (312)
++.+.|||+||.+|+..|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 79999999999999998854
No 229
>PLN02761 lipase class 3 family protein
Probab=94.46 E-value=0.085 Score=45.41 Aligned_cols=21 Identities=38% Similarity=0.561 Sum_probs=18.4
Q ss_pred CcEEEEeechHHHHHHHHHHh
Q 021479 111 VPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
.++++.|||+||.+|+..|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999998853
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.41 E-value=0.29 Score=37.86 Aligned_cols=65 Identities=26% Similarity=0.217 Sum_probs=39.2
Q ss_pred CccEEEeccCCC-ccCc--cCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc
Q 021479 67 NASISAIGSAAQ-TKKN--YDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 67 ~~~vi~~D~~G~-G~s~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
++++..+++|.. +--. .......+..+=++.+.+.|+.... .+++++++|+|.|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 577788888852 1110 0111223444444555555555322 456899999999999999887654
No 231
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.29 E-value=0.12 Score=38.33 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=46.6
Q ss_pred CCcEEEEeecCCCCCChhHHHH---HHHhCCCCc---eeecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 243 QSKIAFLFGVDDHWGPQELYEE---ISEQVPDVP---LAIERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~---~~~~~~~~~---~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
+++.+-|-|++|.++.+..... ++..+|... ...+++||+..|.- ....++|.-.|.+||.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G-~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNG-SRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccc-hhhhhhhhHHHHHHHHh
Confidence 4578889999999998876555 444455422 22789999999996 46777889999999875
No 232
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.15 E-value=1.5 Score=36.30 Aligned_cols=88 Identities=11% Similarity=0.061 Sum_probs=55.8
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
+||++=|+.|..+.| +.+...-...+|+.++.+-.|-+-..........++......+.+++..... ...+++.--.
T Consensus 40 ~Iv~~~gWag~~~r~--l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~-~~~pi~fh~F 116 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRN--LMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNS-DPCPIIFHVF 116 (350)
T ss_pred cEEEEeeeccccchh--HHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccC-CcCceEEEEe
Confidence 466666766666553 2233333345589999988887765543344455666666777777777631 2347777799
Q ss_pred chHHHHHHHHH
Q 021479 119 SIGAYVALEML 129 (312)
Q Consensus 119 S~Gg~ia~~~a 129 (312)
|+||...+...
T Consensus 117 S~ng~~~~~si 127 (350)
T KOG2521|consen 117 SGNGVRLMYSI 127 (350)
T ss_pred cCCceeehHHH
Confidence 99998776543
No 233
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.98 E-value=0.12 Score=45.00 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=61.5
Q ss_pred HHcCCCccEEEeccCCCccCcc----CCC-CC--------cchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHH
Q 021479 62 EHLGGNASISAIGSAAQTKKNY----DHG-RL--------FSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEM 128 (312)
Q Consensus 62 ~~l~~~~~vi~~D~~G~G~s~~----~~~-~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~ 128 (312)
..+..||.++.-|- ||..+.. ... .. ..+.+.+....++++.++....+.-+..|-|-||.-++..
T Consensus 54 ~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~ 132 (474)
T PF07519_consen 54 TALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMA 132 (474)
T ss_pred hhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHH
Confidence 44566999999984 6654431 011 11 1233455555567777766566689999999999999999
Q ss_pred HHhccccceEEEEeccccc
Q 021479 129 LKRSSEKVIYYIGLYPFLA 147 (312)
Q Consensus 129 a~~~p~~v~~lvl~~p~~~ 147 (312)
|++||+-+.|++.-+|.+.
T Consensus 133 AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 133 AQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHhChhhcCeEEeCCchHH
Confidence 9999999999999888764
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.36 E-value=0.15 Score=42.16 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHh
Q 021479 93 EQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 93 ~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
++.+++..+++.. .+-.+.+-|||+||.+|...|..
T Consensus 156 ~~~~~~~~L~~~~---~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELY---PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhc---CCcEEEEecCChHHHHHHHHHHH
Confidence 4445555555554 35589999999999999998854
No 235
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.14 E-value=0.35 Score=35.04 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=31.7
Q ss_pred CcEEEEeechHHHHHHHHHHhccccceEEEEecccc
Q 021479 111 VPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 146 (312)
...++-|-||||..|..+.-++|+.+.++|.++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 468889999999999999999999999999877543
No 236
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=92.65 E-value=0.45 Score=41.53 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=57.7
Q ss_pred CceEEEEEcCCCC---chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHH---HhhcC
Q 021479 36 PKLHVLFVPGNPG---VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQ---ELQNT 109 (312)
Q Consensus 36 ~~~~iv~~HG~~~---~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~---~~~~~ 109 (312)
.+-.|+-+||.|. ++...+.+++.++..| +.-|+.+|+-=- + ...-+..+++.. -..-|+-. ++..-
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL--~cPiiSVdYSLA---P-EaPFPRaleEv~-fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL--GCPIISVDYSLA---P-EAPFPRALEEVF-FAYCWAINNCALLGST 467 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh--CCCeEEeeeccC---C-CCCCCcHHHHHH-HHHHHHhcCHHHhCcc
Confidence 3567888999874 3445566777788777 589999997221 1 111122222211 11112111 22223
Q ss_pred CCcEEEEeechHHHHHHHHHHhc---c-ccceEEEEec
Q 021479 110 EVPIVLVGHSIGAYVALEMLKRS---S-EKVIYYIGLY 143 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~~~---p-~~v~~lvl~~ 143 (312)
+++++++|-|.||.+.+..|.+. . ..-.|+++.-
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY 505 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAY 505 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEec
Confidence 56999999999999776665432 1 1236788754
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.62 E-value=0.25 Score=43.06 Aligned_cols=54 Identities=24% Similarity=0.342 Sum_probs=34.6
Q ss_pred chHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHh-----ccc------cceEEEEec
Q 021479 90 SLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKR-----SSE------KVIYYIGLY 143 (312)
Q Consensus 90 ~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~ 143 (312)
++..-...+.+.+....-+.+++++.+||||||.++=.+... .|+ ..+|+++++
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls 569 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLS 569 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEe
Confidence 444455555555555422335799999999999988766532 232 467888765
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.51 E-value=0.34 Score=38.19 Aligned_cols=47 Identities=21% Similarity=0.183 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
.+-|+..-++..+ .+.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 261 a~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 261 AALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344555555553 3558999999999999999888765 334444343
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.51 E-value=0.34 Score=38.19 Aligned_cols=47 Identities=21% Similarity=0.183 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
.+-|+..-++..+ .+.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 261 a~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 261 AALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344555555553 3558999999999999999888765 334444343
No 240
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.38 E-value=1.4 Score=36.25 Aligned_cols=44 Identities=7% Similarity=-0.019 Sum_probs=38.3
Q ss_pred hhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee--ecCCCccc
Q 021479 240 RENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA--IERHGHTH 283 (312)
Q Consensus 240 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~--i~~~gH~~ 283 (312)
.+...|-.++.|..|.+.++..+....+.+|+.+.. +|+..|..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~ 371 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL 371 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh
Confidence 467889999999999999999999999999998744 89988853
No 241
>PRK12467 peptide synthase; Provisional
Probab=90.54 E-value=1.4 Score=49.25 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=67.4
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEe
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVG 117 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvG 117 (312)
+.+++.|...++...|.. +...+..+..++.+..++.-... ....+++..+....+++... ....+..+.|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~----l~~~l~~~~~~~~l~~~~~~~d~---~~~~~~~~~~~~y~~~~~~~--~~~~p~~l~g 3763 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEP----LAVILEGDRHVLGLTCRHLLDDG---WQDTSLQAMAVQYADYILWQ--QAKGPYGLLG 3763 (3956)
T ss_pred cceeeechhhcchhhhHH----HHHHhCCCCcEEEEecccccccc---CCccchHHHHHHHHHHHHHh--ccCCCeeeee
Confidence 459999998888777777 66666667888888776553221 13446778888888888776 4455899999
Q ss_pred echHHHHHHHHHHhc---cccceEEEE
Q 021479 118 HSIGAYVALEMLKRS---SEKVIYYIG 141 (312)
Q Consensus 118 hS~Gg~ia~~~a~~~---p~~v~~lvl 141 (312)
+|+||.++.+++... .+.+.-+.+
T Consensus 3764 ~s~g~~~a~~~~~~l~~~g~~~~~~~~ 3790 (3956)
T PRK12467 3764 WSLGGTLARLVAELLEREGESEAFLGL 3790 (3956)
T ss_pred eecchHHHHHHHHHHHHcCCceeEEEE
Confidence 999999999988643 334444433
No 242
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.85 E-value=1.2 Score=36.82 Aligned_cols=59 Identities=15% Similarity=0.077 Sum_probs=43.3
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHHhCC------------C-------------Ccee-ecCCCccccccccccchHHHH
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISEQVP------------D-------------VPLA-IERHGHTHNFCCSEAGSAWVA 296 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------~-------------~~~~-i~~~gH~~~~~~~~~~~~~v~ 296 (312)
.++||+..|+.|.+++....+.+.+.+. + -.+. |.++||+.. .+|+ ...
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~----~al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPN----ETF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHH----HHH
Confidence 4799999999999999887777665432 1 2234 668999985 4665 777
Q ss_pred HHHHHHHHhh
Q 021479 297 SHVAGLIKNK 306 (312)
Q Consensus 297 ~~v~~~l~~~ 306 (312)
+.+..||+..
T Consensus 308 ~m~~~fi~~~ 317 (319)
T PLN02213 308 IMFQRWISGQ 317 (319)
T ss_pred HHHHHHHcCC
Confidence 8888888653
No 243
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=85.62 E-value=9.2 Score=31.16 Aligned_cols=94 Identities=17% Similarity=0.072 Sum_probs=58.9
Q ss_pred CCCceEEEEEcCCCCc----h-hcHHHHHHHHHHHcC--CCccEEEeccCCCccCcc-------------CC--CCCcch
Q 021479 34 DDPKLHVLFVPGNPGV----I-TFYKDFVQSLYEHLG--GNASISAIGSAAQTKKNY-------------DH--GRLFSL 91 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~----~-~~~~~~~~~l~~~l~--~~~~vi~~D~~G~G~s~~-------------~~--~~~~~~ 91 (312)
+.++-.|+|+-|.... . ..--. |...|. ++.+++++=.+|.|.-.. .. .-.+.+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~----Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL 103 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVL----LYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGL 103 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHH----HHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHH
Confidence 3456778888884322 1 11222 222332 467888887788875410 00 112356
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
.+.+.....|+...+. .++.|+++|+|-|+.+|-.+|...
T Consensus 104 ~~nI~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 104 VQNIREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHHH
Confidence 6777777777776554 566899999999999998888653
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.39 E-value=2 Score=37.09 Aligned_cols=37 Identities=30% Similarity=0.333 Sum_probs=27.8
Q ss_pred cCCCcEEEEeechHHHHHHHHHHhcc-----ccceEEEEecc
Q 021479 108 NTEVPIVLVGHSIGAYVALEMLKRSS-----EKVIYYIGLYP 144 (312)
Q Consensus 108 ~~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~p 144 (312)
...+|+.|||+|+|+-+......... +.|..++|++.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~Ga 485 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGA 485 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccC
Confidence 35679999999999999886654322 35888888763
No 245
>PLN02209 serine carboxypeptidase
Probab=85.06 E-value=2.5 Score=36.53 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=43.5
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHHhCC------------------------C-Ccee-ecCCCccccccccccchHHHH
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISEQVP------------------------D-VPLA-IERHGHTHNFCCSEAGSAWVA 296 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~-i~~~gH~~~~~~~~~~~~~v~ 296 (312)
.+++|+..|+.|-+++....+.+.+.+. + -.+. |.++||+.. .+|+ +..
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~----~al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPE----ESS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHH----HHH
Confidence 5799999999999999887777666332 1 2344 778999985 4766 677
Q ss_pred HHHHHHHHh
Q 021479 297 SHVAGLIKN 305 (312)
Q Consensus 297 ~~v~~~l~~ 305 (312)
+.+..|+..
T Consensus 426 ~m~~~fi~~ 434 (437)
T PLN02209 426 IMFQRWISG 434 (437)
T ss_pred HHHHHHHcC
Confidence 788888764
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.52 E-value=11 Score=30.36 Aligned_cols=43 Identities=21% Similarity=0.392 Sum_probs=32.9
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc
Q 021479 89 FSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
..+++.+.....++...+ ....+++++|.|-|+.+|=.+|..-
T Consensus 71 ~g~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 71 WGIEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred cchHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 467778887777775544 3455899999999999999988654
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=83.36 E-value=11 Score=25.00 Aligned_cols=71 Identities=10% Similarity=0.031 Sum_probs=40.1
Q ss_pred CccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHH--HHHHHHHhccccceEEE
Q 021479 67 NASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAY--VALEMLKRSSEKVIYYI 140 (312)
Q Consensus 67 ~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~--ia~~~a~~~p~~v~~lv 140 (312)
++-.=.+.++..|.+....-....-+.=...+..+++.+ .+.+++|||-|--.= +-..+|.++|++|.++.
T Consensus 24 ~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f---P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~ 96 (100)
T PF09949_consen 24 GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF---PERKFILIGDSGQHDPEIYAEIARRFPGRILAIY 96 (100)
T ss_pred CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC---CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEE
Confidence 444444556666544211111111123334444555554 456899999885543 44467899999998876
No 248
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=82.99 E-value=3.8 Score=35.41 Aligned_cols=59 Identities=15% Similarity=0.077 Sum_probs=43.8
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHHhCC------------C-------------Ccee-ecCCCccccccccccchHHHH
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISEQVP------------D-------------VPLA-IERHGHTHNFCCSEAGSAWVA 296 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------~-------------~~~~-i~~~gH~~~~~~~~~~~~~v~ 296 (312)
..+||+..|+.|.+++....+.+.+.+. + ..+. |.++||+.. .+|+ ...
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~----~al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPN----ETF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHH----HHH
Confidence 5799999999999999988877665331 1 1234 678999986 4665 777
Q ss_pred HHHHHHHHhh
Q 021479 297 SHVAGLIKNK 306 (312)
Q Consensus 297 ~~v~~~l~~~ 306 (312)
+.+..||+..
T Consensus 422 ~m~~~Fi~~~ 431 (433)
T PLN03016 422 IMFQRWISGQ 431 (433)
T ss_pred HHHHHHHcCC
Confidence 8888888653
No 249
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=81.82 E-value=15 Score=25.54 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=38.4
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCC---ccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcC
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGN---ASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNT 109 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~---~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 109 (312)
+..+|.|+-+||++|+...|- ...+++.| .+| --|-.+...-| -.....++++-+++.++|.......
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v--~~liA~~ly~~G~~S~~V~~f~~~~h------FP~~~~v~~Yk~~L~~~I~~~v~~C 120 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFV--SRLIAEHLYKSGMKSPFVHQFIATHH------FPHNSNVDEYKEQLKSWIRGNVSRC 120 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHH--HHHHHHHHHhcccCCCceeeeccccc------CCCchHHHHHHHHHHHHHHHHHHhC
Confidence 455889999999999987752 12233332 212 11222111111 1122356677777777777654333
Q ss_pred CCcEEE
Q 021479 110 EVPIVL 115 (312)
Q Consensus 110 ~~~~~l 115 (312)
.+.+++
T Consensus 121 ~rslFI 126 (127)
T PF06309_consen 121 PRSLFI 126 (127)
T ss_pred CcCeee
Confidence 333443
No 250
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=79.75 E-value=3.2 Score=35.01 Aligned_cols=64 Identities=17% Similarity=0.339 Sum_probs=41.7
Q ss_pred hhhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccc-cccchHHHHHHHHHHH
Q 021479 238 FMRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCC-SEAGSAWVASHVAGLI 303 (312)
Q Consensus 238 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~-~~~~~~~v~~~v~~~l 303 (312)
.+++-...+++|+|++|++...... +.+-..+..+. .++++|...+.. |++-.++....|.+|-
T Consensus 346 Wvr~~~~rmlFVYG~nDPW~A~~f~--l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 346 WVRNNGPRMLFVYGENDPWSAEPFR--LGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HHHhCCCeEEEEeCCCCCcccCccc--cCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 4555667899999999999654421 11111234455 799999776653 4555667777888884
No 251
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=79.14 E-value=43 Score=29.29 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=59.3
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHH-HHHHHHHHHHHhhcCCCcEE
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQ-VEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~ 114 (312)
+.|..|.+.|+-. ++-|+.+. +.+.|. .=-.+.-|.|=-|.+=.-. ...+++- ++-+.+.++.+-- ..+.++
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~--MMk~Lg-~PfLL~~DpRleGGaFYlG--s~eyE~~I~~~I~~~L~~LgF-~~~qLI 360 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYF--MMKRLG-APFLLIGDPRLEGGAFYLG--SDEYEQGIINVIQEKLDYLGF-DHDQLI 360 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHH--HHHhcC-CCeEEeeccccccceeeeC--cHHHHHHHHHHHHHHHHHhCC-CHHHee
Confidence 4577888888765 44444422 224554 2334555887666653111 1123443 3334455566521 234799
Q ss_pred EEeechHHHHHHHHHHhccccceEEEEeccc
Q 021479 115 LVGHSIGAYVALEMLKRSSEKVIYYIGLYPF 145 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p~ 145 (312)
|-|-|||..-|+.|+++.. -.++|+--|.
T Consensus 361 LSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 361 LSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred eccccccchhhhhhcccCC--CceEEEcCcc
Confidence 9999999999999998764 2466654454
No 252
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=73.55 E-value=13 Score=32.70 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=50.5
Q ss_pred CChhhhhhcCCcEEEEeecCCCCCChhHHHHHHH----hCCC--------Ccee-ecCCCccccccccccchHHHHHHHH
Q 021479 234 PDWAFMRENQSKIAFLFGVDDHWGPQELYEEISE----QVPD--------VPLA-IERHGHTHNFCCSEAGSAWVASHVA 300 (312)
Q Consensus 234 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~----~~~~--------~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~ 300 (312)
+|...+++---++++.||..|.++|+.....+.+ ..+. .++. +|+.+|...-.-+..+ .+...|.
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~--d~l~aL~ 421 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF--DALTALV 421 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC--CHHHHHH
Confidence 3455566667799999999999999887666554 3332 2355 8999998765543322 5677888
Q ss_pred HHHHhhc
Q 021479 301 GLIKNKI 307 (312)
Q Consensus 301 ~~l~~~~ 307 (312)
+|+++-.
T Consensus 422 ~WVE~G~ 428 (474)
T PF07519_consen 422 DWVENGK 428 (474)
T ss_pred HHHhCCC
Confidence 9998654
No 253
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.02 E-value=5.7 Score=31.69 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHH---HhccccceEEEEecccc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEML---KRSSEKVIYYIGLYPFL 146 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a---~~~p~~v~~lvl~~p~~ 146 (312)
..+.+.+.+..+-.+...+++|.|.|+|+.-+...- ...-+++.|.++.+|+.
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 333444444443222334799999999988666543 23335799999888643
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=70.10 E-value=7.1 Score=32.01 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=25.0
Q ss_pred HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 98 KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+++.+++. ++. .-.++|-|+|+.++..||..++
T Consensus 33 vL~aLee~--gi~-~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEA--GIP-VDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHc--CCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 44555555 454 6789999999999999998753
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=68.28 E-value=9.4 Score=28.13 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 99 MDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 99 ~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.+.+++. +.. .-.+.|-|.|+.++..++...+
T Consensus 17 l~aL~e~--gi~-~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRER--GPL-IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHc--CCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 3444444 344 7899999999999999998755
No 256
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=68.19 E-value=45 Score=26.85 Aligned_cols=98 Identities=14% Similarity=-0.046 Sum_probs=51.3
Q ss_pred EEcCCCCchhcHHHHHHHHHHHcCCCccEEEe------ccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 42 FVPGNPGVITFYKDFVQSLYEHLGGNASISAI------GSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 42 ~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~------D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
.+||.-|+...--+ +... |++|+++ ..+|||...+. ....++.+++++-++..-....-..++
T Consensus 10 Vv~G~vGn~AA~f~----lq~~---G~~V~~vpTV~fSnHtgyg~~~g~----v~~~e~l~~~l~~l~~~~~~~~~davl 78 (281)
T COG2240 10 VVYGSVGNSAAIFP----LQRL---GLDVWAVPTVQFSNHTGYGKWTGI----VMPPEQLADLLNGLEAIDKLGECDAVL 78 (281)
T ss_pred EeecccccHhHHHH----HHHc---CCceeeeceEEecCCCCCCCCCCc----CCCHHHHHHHHHHHHhcccccccCEEE
Confidence 35777777766444 4444 7888776 58899876422 233444444444444410012225778
Q ss_pred EeechHHHHHHHHH----HhccccceEEEEecccccccC
Q 021479 116 VGHSIGAYVALEML----KRSSEKVIYYIGLYPFLALIR 150 (312)
Q Consensus 116 vGhS~Gg~ia~~~a----~~~p~~v~~lvl~~p~~~~~~ 150 (312)
-|+=-.+..+-..+ +-..++-+.++++.|+.+...
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 77733332222222 111122347788888877554
No 257
>PRK10279 hypothetical protein; Provisional
Probab=67.38 E-value=8.4 Score=31.46 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc
Q 021479 99 MDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE 134 (312)
Q Consensus 99 ~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 134 (312)
++.+++. ++. .-.++|-|+|+.++..||....+
T Consensus 24 L~aL~E~--gi~-~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 24 INALKKV--GIE-IDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHc--CCC-cCEEEEEcHHHHHHHHHHcCChH
Confidence 3444444 454 78899999999999999976543
No 258
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=65.59 E-value=10 Score=30.41 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=24.2
Q ss_pred HHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc
Q 021479 98 KMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
+++.+++. ++. .=.+.|-|+|+.++..||...
T Consensus 28 VL~aLeE~--gi~-~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA--GIP-IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc--CCC-ccEEEEECHHHHHHHHHHcCC
Confidence 34445554 455 678999999999999999864
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=62.84 E-value=12 Score=28.03 Aligned_cols=22 Identities=27% Similarity=0.160 Sum_probs=19.2
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+=.++|-|.||.+|..++....
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred cceEEEECHHHHHHHHHHcCCC
Confidence 6789999999999999997543
No 260
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=62.80 E-value=14 Score=28.61 Aligned_cols=22 Identities=32% Similarity=0.320 Sum_probs=19.1
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.-.++|-|.|+.+|..+|...+
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCCC
Confidence 6789999999999999997554
No 261
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=62.54 E-value=40 Score=28.43 Aligned_cols=86 Identities=17% Similarity=0.111 Sum_probs=57.1
Q ss_pred CceEEEEEcCCCCc-------hhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhc
Q 021479 36 PKLHVLFVPGNPGV-------ITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQN 108 (312)
Q Consensus 36 ~~~~iv~~HG~~~~-------~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~ 108 (312)
+...||++||-..+ .++|..++..+. +.--+-.+|..-+|..+ .+++++..+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~----~r~lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~--- 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIK----ERGLIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG--- 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHH----HcCCeeeeehhhhhhcc-------chHHHHHHHHHHHHhC---
Confidence 34569999985544 457887444444 34556677877666554 4778887777766664
Q ss_pred CCCcEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
+-.++..|+-=.. ..|.+||-++.+++
T Consensus 236 ---~~~lva~S~SKnf-----gLYgERVGa~~vva 262 (396)
T COG1448 236 ---PELLVASSFSKNF-----GLYGERVGALSVVA 262 (396)
T ss_pred ---CcEEEEehhhhhh-----hhhhhccceeEEEe
Confidence 3378888865443 34788999999876
No 262
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=62.05 E-value=12 Score=30.48 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=17.8
Q ss_pred cCCCcEEEEeechHHHHHHHHHH
Q 021479 108 NTEVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 108 ~~~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
+.. +-.++|||+|-..|+..+.
T Consensus 80 Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCc-ccEEEecCHHHHHHHHHhC
Confidence 344 8899999999998887764
No 263
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=60.29 E-value=74 Score=24.47 Aligned_cols=42 Identities=7% Similarity=0.040 Sum_probs=25.4
Q ss_pred CCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCc-cEEEeccCC
Q 021479 34 DDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNA-SISAIGSAA 77 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~-~vi~~D~~G 77 (312)
+++..+|++.||...++..+...+..+... .+| .|+..-.-|
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~--~~f~~v~v~~ve~ 177 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDE--YGFDNVFVAAVEG 177 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHh--cCCCceEEEEecC
Confidence 355678999999888776554444444433 256 555544433
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.20 E-value=14 Score=30.10 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=17.2
Q ss_pred CcEEEEeechHHHHHHHHHH
Q 021479 111 VPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~ 130 (312)
+|-.++|||+|=..|+..+.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 58999999999988887764
No 265
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=59.89 E-value=33 Score=25.81 Aligned_cols=14 Identities=14% Similarity=0.060 Sum_probs=10.7
Q ss_pred cEEEeccCCCccCcc
Q 021479 69 SISAIGSAAQTKKNY 83 (312)
Q Consensus 69 ~vi~~D~~G~G~s~~ 83 (312)
.+|++| ||||..++
T Consensus 1 k~I~iD-pGHGg~d~ 14 (189)
T TIGR02883 1 KIIVID-PGHGGIDG 14 (189)
T ss_pred CEEEEe-CCCCCCCC
Confidence 367788 89998863
No 266
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.73 E-value=7.6 Score=32.03 Aligned_cols=19 Identities=42% Similarity=0.733 Sum_probs=16.1
Q ss_pred CcEEEEeechHHHHHHHHH
Q 021479 111 VPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a 129 (312)
.|-.++|||+|=..|+..+
T Consensus 84 ~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp CESEEEESTTHHHHHHHHT
T ss_pred ccceeeccchhhHHHHHHC
Confidence 4899999999988877665
No 267
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=59.62 E-value=45 Score=24.08 Aligned_cols=61 Identities=10% Similarity=0.095 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHH
Q 021479 54 KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALE 127 (312)
Q Consensus 54 ~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~ 127 (312)
+.-...+.+.++++-.|++.|.+|--.|+ ++.++.+ +.......+=.+++|-|.|=.-++.
T Consensus 54 ~~E~~~il~~i~~~~~vi~Ld~~Gk~~sS---------e~fA~~l----~~~~~~G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 54 KKEGEAILAAIPKGSYVVLLDIRGKALSS---------EEFADFL----ERLRDDGRDISFLIGGADGLSEAVK 114 (155)
T ss_pred HHHHHHHHHhcCCCCeEEEEecCCCcCCh---------HHHHHHH----HHHHhcCCeEEEEEeCcccCCHHHH
Confidence 34445577778888899999998865543 3444333 3221122446889999988444433
No 268
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.10 E-value=17 Score=26.82 Aligned_cols=22 Identities=27% Similarity=0.244 Sum_probs=19.5
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.=.+.|-|.|+.+|..++...+
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCC
Confidence 6789999999999999998655
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.82 E-value=18 Score=27.86 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 99 MDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 99 ~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.+.+.+. +. ..-.+.|.|.|+.+|..+|...+
T Consensus 17 l~aL~e~--g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEA--GI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHc--CC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 3444444 33 36789999999999999999875
No 270
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=55.73 E-value=18 Score=29.71 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=23.6
Q ss_pred HHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 100 DFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 100 ~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+.+++. ++. +-.+.|-|+|+.++..+|....
T Consensus 31 ~aL~e~--gi~-~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 31 KALEEA--GIP-IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHc--CCC-ccEEEecCHHHHHHHHHHcCCC
Confidence 444444 344 7899999999999999998644
No 271
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=55.56 E-value=86 Score=23.50 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=28.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEec
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIG 74 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D 74 (312)
..++.+|++-|.+|+... .++..+.+.| ..|++++..|
T Consensus 20 ~~~~~viW~TGLSGsGKS--TiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKS--TIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHH--HHHHHHHHHHHHcCCeEEEec
Confidence 446789999999998765 5555565555 4599999998
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=54.20 E-value=18 Score=29.19 Aligned_cols=21 Identities=38% Similarity=0.525 Sum_probs=17.5
Q ss_pred CcEEEEeechHHHHHHHHHHh
Q 021479 111 VPIVLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~ 131 (312)
.+-.++|||+|=..|+..+..
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCC
Confidence 488999999999888877743
No 273
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.38 E-value=12 Score=30.90 Aligned_cols=21 Identities=33% Similarity=0.441 Sum_probs=17.8
Q ss_pred EEEEeechHHHHHHHHHHhcc
Q 021479 113 IVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p 133 (312)
=.+.|.|+||.+|..++..++
T Consensus 34 D~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 34 DWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred cEEEeeChHHHHHHHHHcCCC
Confidence 368999999999999997544
No 274
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=52.68 E-value=94 Score=25.06 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=41.4
Q ss_pred CccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE-EeechHHHHHHHHHHhcc-ccceEEEE
Q 021479 67 NASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL-VGHSIGAYVALEMLKRSS-EKVIYYIG 141 (312)
Q Consensus 67 ~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-vGhS~Gg~ia~~~a~~~p-~~v~~lvl 141 (312)
++.++.+|-+|....+ .+..+.+.++++.. ... .++| +.-++++.-+...+..+. -.+.++|+
T Consensus 154 ~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~--~~~-~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYRA---------SETVEEMIETMGQV--EPD-YICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcCC---------HHHHHHHHHHHhhh--CCC-eEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 6899999998875332 34555566666654 333 3555 445678888888877754 35788885
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=52.51 E-value=27 Score=25.75 Aligned_cols=21 Identities=24% Similarity=0.140 Sum_probs=18.5
Q ss_pred cEEEEeechHHHHHHHHHHhc
Q 021479 112 PIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
.-.++|-|.|+.+|..++...
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCC
Confidence 678999999999999998654
No 276
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.30 E-value=26 Score=27.46 Aligned_cols=23 Identities=26% Similarity=0.163 Sum_probs=19.6
Q ss_pred cEEEEeechHHHHHHHHHHhccc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSE 134 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~ 134 (312)
.-.+.|-|.|+.++..++...+.
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCCH
Confidence 34899999999999999987653
No 277
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=51.60 E-value=29 Score=25.17 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=26.3
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEecc
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGS 75 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~ 75 (312)
++.+|++-|.+++... .++..+.+.| ..++.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKt--TlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKT--TLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHH--HHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHH--HHHHHHHHHHHHcCCcEEEecC
Confidence 3679999999998765 5566666666 44899999873
No 278
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=51.03 E-value=10 Score=31.67 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=40.1
Q ss_pred hhhhhcCCcEEEEeecCCCCCChhH-HHHHHHhCCCC--cee-ecCCCcccccccccc
Q 021479 237 AFMRENQSKIAFLFGVDDHWGPQEL-YEEISEQVPDV--PLA-IERHGHTHNFCCSEA 290 (312)
Q Consensus 237 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~--~~~-i~~~gH~~~~~~~~~ 290 (312)
..+.+++.|++++.|..|...|... +......+++. .+. ++++.|.-+++-.++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 3566899999999999999776653 33445566776 344 899999888876554
No 279
>COG0218 Predicted GTPase [General function prediction only]
Probab=50.91 E-value=22 Score=26.91 Aligned_cols=59 Identities=12% Similarity=0.185 Sum_probs=34.4
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHH---HHHHhC---CCCc--ee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYE---EISEQV---PDVP--LA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~---~~~~~~---~~~~--~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
+.....|++++.-.-|.+-..+..+ ..++.+ +... +. +.-.. ....+++.+.|.+|+..
T Consensus 131 l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~--------k~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 131 LLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLK--------KKGIDELKAKILEWLKE 198 (200)
T ss_pred HHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccc--------ccCHHHHHHHHHHHhhc
Confidence 4456789999999999987666543 333322 2222 22 22111 12245788888888764
No 280
>PLN02748 tRNA dimethylallyltransferase
Probab=50.21 E-value=1.3e+02 Score=26.49 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=49.8
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEecc----CCC----ccC--------------ccCCCCCcchHH
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGS----AAQ----TKK--------------NYDHGRLFSLDE 93 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~----~G~----G~s--------------~~~~~~~~~~~~ 93 (312)
+++.+|+|-|-.++... .++..++..+ +..||..|- +|. ..- -..+...|+..+
T Consensus 20 ~~~~~i~i~GptgsGKs--~la~~la~~~--~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 20 GKAKVVVVMGPTGSGKS--KLAVDLASHF--PVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCEEEEECCCCCCHH--HHHHHHHHhc--CeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 34558888887777654 4444566654 356888772 222 111 113446788889
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeec
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
+..++...|+....... ..+|||-|
T Consensus 96 F~~~A~~~I~~I~~rgk-~PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRNG-LPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcCC-CeEEEcCh
Confidence 99999998888654344 57777755
No 281
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=50.13 E-value=18 Score=31.18 Aligned_cols=29 Identities=24% Similarity=0.338 Sum_probs=23.1
Q ss_pred CCCcEEEEeechHHHHHHHHHHhccccceE
Q 021479 109 TEVPIVLVGHSIGAYVALEMLKRSSEKVIY 138 (312)
Q Consensus 109 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 138 (312)
+. +=++.|-|.|+.+|..++...++.+..
T Consensus 100 l~-p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 100 LL-PRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred CC-CCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 44 568999999999999999876665443
No 282
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.83 E-value=66 Score=23.48 Aligned_cols=48 Identities=10% Similarity=0.152 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEE
Q 021479 92 DEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYI 140 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 140 (312)
++.-+.+.++++.+... +.++.++|-|..|.+-+.++...++.+..++
T Consensus 51 ~~~~~~l~~~L~~~~~~-gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAE-GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHT-T--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHc-CCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 33444555666555443 3479999999999999999877666666666
No 283
>COG3933 Transcriptional antiterminator [Transcription]
Probab=49.48 E-value=1.4e+02 Score=25.92 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=52.2
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 114 (312)
+...+||..||...-+.. .. .+.+|-..--+.++|+|= ..+..+..+.+.+.+++. ... +=.
T Consensus 107 ~~v~vIiiAHG~sTASSm-ae----vanrLL~~~~~~aiDMPL----------dvsp~~vle~l~e~~k~~--~~~-~Gl 168 (470)
T COG3933 107 PRVKVIIIAHGYSTASSM-AE----VANRLLGEEIFIAIDMPL----------DVSPSDVLEKLKEYLKER--DYR-SGL 168 (470)
T ss_pred CceeEEEEecCcchHHHH-HH----HHHHHhhccceeeecCCC----------cCCHHHHHHHHHHHHHhc--Ccc-Cce
Confidence 335689999998765443 44 333333246788999862 346788888888888887 333 456
Q ss_pred EEeechHHHHHHHHH
Q 021479 115 LVGHSIGAYVALEML 129 (312)
Q Consensus 115 lvGhS~Gg~ia~~~a 129 (312)
++=..||......=.
T Consensus 169 llLVDMGSL~~f~~~ 183 (470)
T COG3933 169 LLLVDMGSLTSFGSI 183 (470)
T ss_pred EEEEecchHHHHHHH
Confidence 777899998777544
No 284
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=49.38 E-value=59 Score=24.77 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=44.4
Q ss_pred ccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeech----HHHHHHHHHHhcc-ccceEEEEe
Q 021479 68 ASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSI----GAYVALEMLKRSS-EKVIYYIGL 142 (312)
Q Consensus 68 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~lvl~ 142 (312)
-+|+..|.++. ..++.+.+++.+.++++.. + . .++|+|+|. |..++-++|.+.. ..+..++-+
T Consensus 78 d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~--~-p-~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAF--------AGADTLATAKALAAAIKKI--G-V-DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccc--------cCCChHHHHHHHHHHHHHh--C-C-CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 36777765433 2356788888888888776 3 3 699999999 8889999887754 234555433
No 285
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=49.28 E-value=31 Score=26.03 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=23.2
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCc
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQT 79 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G 79 (312)
|.++.|.+|+...+.-+...+.+.+.+|..|++ +.+|--
T Consensus 2 I~~~~G~pGsGKS~~av~~~i~~~l~~gr~V~t-ni~gL~ 40 (193)
T PF05707_consen 2 IYLITGKPGSGKSYYAVSYVIIPALKKGRPVYT-NIPGLN 40 (193)
T ss_dssp EEEEE--TTSSHHHHHHHHHHH-GGGS---EEE---TTB-
T ss_pred EEEEEcCCCCcHhHHHHHHHHHHHHhCCCEEEE-ccCCcc
Confidence 678999999998877766657777877777777 887664
No 286
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=47.73 E-value=1.6e+02 Score=24.26 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=48.6
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEecc----CCC----ccC--------------ccCCCCCcchHHHHH
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGS----AAQ----TKK--------------NYDHGRLFSLDEQVE 96 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~----~G~----G~s--------------~~~~~~~~~~~~~~~ 96 (312)
.||++-|-.++... .++-.+++. ...||..|- +|. .+- -..+...++..++.+
T Consensus 5 ~ii~I~GpTasGKS--~LAl~LA~~---~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~ 79 (300)
T PRK14729 5 KIVFIFGPTAVGKS--NILFHFPKG---KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYK 79 (300)
T ss_pred cEEEEECCCccCHH--HHHHHHHHh---CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHH
Confidence 37888887777655 445556666 348888883 332 211 113555788888999
Q ss_pred HHHHHHHHHhhcCCCcEEEEeec
Q 021479 97 HKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
+..+.|+...... ...+|+|-|
T Consensus 80 ~a~~~i~~i~~~g-k~PilvGGT 101 (300)
T PRK14729 80 EALKIIKELRQQK-KIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHCC-CCEEEEeCc
Confidence 9999998864433 356788755
No 287
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=47.48 E-value=19 Score=28.72 Aligned_cols=13 Identities=38% Similarity=0.731 Sum_probs=11.2
Q ss_pred CcEEEEeechHHH
Q 021479 111 VPIVLVGHSIGAY 123 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ 123 (312)
..++++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 4799999999964
No 288
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=47.07 E-value=61 Score=29.17 Aligned_cols=49 Identities=12% Similarity=0.339 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEee------chHHHHHHHHHHhccccceEEEEecc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGH------SIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
-+..+-+.+.......+ +|+++|| +.|+.+++..-+..-++ .+.+.+.|
T Consensus 322 RaRvis~al~d~i~e~d-~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKESD-NVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhhcC-cEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 44455555555443344 7999999 78999999765544443 45555543
No 289
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=46.39 E-value=43 Score=26.82 Aligned_cols=39 Identities=3% Similarity=0.040 Sum_probs=28.6
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEecc
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGS 75 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~ 75 (312)
+..|+||++.|+.++... ..+..+.+.+ +.+++|.++.-
T Consensus 53 ~~~~vlIv~eG~DaAGKG--~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKD--GTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCCcEEEEEECCCCCCch--HHHHHHHHhcCCCeeEEEeCCC
Confidence 346899999999887655 4455577777 45899988744
No 290
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.10 E-value=35 Score=27.25 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=20.2
Q ss_pred cEEEEeechHHHHHHHHHHhcccc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEK 135 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~ 135 (312)
.=.++|.|.|+.++..++...+.+
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcch
Confidence 348999999999999999876643
No 291
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=44.67 E-value=26 Score=27.36 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=27.1
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEeccC
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGSA 76 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~~ 76 (312)
.|+||++.|+.++... ..+..+...| +.+++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg--~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKG--GTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHH--HHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCch--HHHHHHHHhCCCCeeEEEeCCCC
Confidence 5799999999988765 4455566666 458999988755
No 292
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=43.70 E-value=61 Score=21.46 Aligned_cols=43 Identities=14% Similarity=0.247 Sum_probs=30.7
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccC
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKK 81 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s 81 (312)
.++||++.|-.....-|.. ...+.+.|. +-+++..+-.|||-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~-a~~~~~~l~-~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG-ARAMAARLP-GSRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHH-HHHHHHHCC-CceEEEEeccCccee
Confidence 4679999998665554443 444667776 478888888899866
No 293
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=43.63 E-value=94 Score=20.87 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=39.2
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEecc--CCCccCccCCCCCcchHHHHHHHHHHHHHHhh-cCCCcEEEE
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGS--AAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQ-NTEVPIVLV 116 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~--~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~lv 116 (312)
+|++.|.+++... .+++.|++.+ ++.++..|- +-.+................+.+.+.++.... .....+++-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~--~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~ 76 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERL--GFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQLQNKPDNDNWIID 76 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHH--TCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHHHETTT--EEEEE
T ss_pred CEEEECCCCCCHH--HHHHHHHHHH--CCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhhhccCCCCeEEEe
Confidence 5888999988776 5556677765 688888887 44444421111111123344444455554411 012235565
Q ss_pred e
Q 021479 117 G 117 (312)
Q Consensus 117 G 117 (312)
|
T Consensus 77 g 77 (121)
T PF13207_consen 77 G 77 (121)
T ss_dssp C
T ss_pred C
Confidence 6
No 294
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B.
Probab=43.63 E-value=75 Score=22.88 Aligned_cols=68 Identities=12% Similarity=0.011 Sum_probs=33.5
Q ss_pred chhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHH
Q 021479 49 VITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVA 125 (312)
Q Consensus 49 ~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia 125 (312)
+.+-|+. +.+.++ +.+|+++|.-=....++.+....-+...+.+....+... +.++.|+=..+|+..-
T Consensus 39 NGRTydH----LRe~~p-~R~I~vfDR~l~~hp~~~P~~~~~ilGdi~~tl~~~~~~----g~~a~laHaD~G~g~~ 106 (160)
T PF12692_consen 39 NGRTYDH----LREIFP-DRRIYVFDRALACHPSSTPPEEDLILGDIRETLPALARF----GAGAALAHADIGTGDK 106 (160)
T ss_dssp TSHHHHH----HHHH---SS-EEEEESS--S-GGG---GGGEEES-HHHHHHHHHHH-----S-EEEEEE----S-H
T ss_pred CCccHHH----HHHhCC-CCeEEEEeeecccCCCCCCchHheeeccHHHHhHHHHhc----CCceEEEEeecCCCCc
Confidence 4566777 777777 799999997633222223444444555666666654444 3479999999998753
No 295
>PF04270 Strep_his_triad: Streptococcal histidine triad protein ; InterPro: IPR006270 This entry represents a repeated sequence region that includes a His-X-X-His-X-His (histidine triad) motif, which is found in family of Streptococcal proteins. Members of the family are suggested to cleave human complement component 3, and family member PhpA has been shown in vaccine studies to be a protective antigen in mice []. ; PDB: 2CS7_C.
Probab=42.99 E-value=40 Score=19.27 Aligned_cols=32 Identities=9% Similarity=0.056 Sum_probs=20.3
Q ss_pred ceeecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 273 PLAIERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 273 ~~~i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
-++++.++|+|.+-+.+.-. .=.+...+|+++
T Consensus 21 gy~vpHgdH~HyI~k~dLs~-~E~~aA~~~~~~ 52 (53)
T PF04270_consen 21 GYVVPHGDHFHYIPKSDLSA-SELKAAQAYLAG 52 (53)
T ss_dssp EEEEEETTEEEEEEGGGS-H-HHHHHHHHHHH-
T ss_pred eEEeeCCCcccCCchhhCCH-HHHHHHHHHHhc
Confidence 35588899999998854333 334555666654
No 296
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.78 E-value=28 Score=29.98 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=23.4
Q ss_pred cEEEEeechHHHHHHHHHHhccccceEEE
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEKVIYYI 140 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 140 (312)
+=++.|-|.|+.+|..++...++.+..++
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 66799999999999999987666654443
No 297
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=42.69 E-value=50 Score=25.82 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=43.2
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEeccCCCccCccCCCCCcchHHHHH-HHHHHHHHHhhcCCCcEE
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIGSAAQTKKNYDHGRLFSLDEQVE-HKMDFIRQELQNTEVPIV 114 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~ 114 (312)
.|+||++.|+.++... ..+..+...+ +.+++|.++.-|-- ++... -+-.+-..+ + ....+.
T Consensus 30 ~~vlIv~eG~DaAGKg--~~I~~l~~~lDPRg~~v~~~~~pt~-------------eE~~~p~lwRfw~~l-P-~~G~i~ 92 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKG--GTIKRITEHLNPRGARVVALPKPSD-------------RERTQWYFQRYVQHL-P-AAGEIV 92 (230)
T ss_pred CCEEEEEeCCCCCCch--HHHHHHHHhcCCCeeEEEeCCCCCH-------------HHHcChHHHHHHHhC-C-CCCeEE
Confidence 5899999999887655 4455577776 45899988754321 11111 233444444 3 234688
Q ss_pred EEeechHHHH
Q 021479 115 LVGHSIGAYV 124 (312)
Q Consensus 115 lvGhS~Gg~i 124 (312)
++=-|+=+-+
T Consensus 93 IF~rSwY~~~ 102 (230)
T TIGR03707 93 LFDRSWYNRA 102 (230)
T ss_pred EEeCchhhhH
Confidence 8877775543
No 298
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=42.58 E-value=1.7e+02 Score=24.21 Aligned_cols=74 Identities=18% Similarity=0.162 Sum_probs=43.0
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccC--CCccC--------------------ccCCCCCcchHHHH
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSA--AQTKK--------------------NYDHGRLFSLDEQV 95 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~--G~G~s--------------------~~~~~~~~~~~~~~ 95 (312)
+.+|++-|-.++... .++..+++.+ +..++..|-. -.|.+ ...+...++..++.
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~--~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~ 79 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRL--NGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQ 79 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhC--CCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHH
Confidence 457888888777654 5555566665 3566766652 11111 11223356777788
Q ss_pred HHHHHHHHHHhhcCCCcEEEE
Q 021479 96 EHKMDFIRQELQNTEVPIVLV 116 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lv 116 (312)
+++.+.++....... .++|+
T Consensus 80 ~~a~~~i~~i~~~gk-~pIlv 99 (307)
T PRK00091 80 RDALAAIADILARGK-LPILV 99 (307)
T ss_pred HHHHHHHHHHHhCCC-CEEEE
Confidence 888888887543333 45666
No 299
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=42.57 E-value=92 Score=25.23 Aligned_cols=72 Identities=19% Similarity=0.319 Sum_probs=41.3
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccC----------CCccCcc---CCCCCc-chHHHHHHHHHH
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSA----------AQTKKNY---DHGRLF-SLDEQVEHKMDF 101 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~----------G~G~s~~---~~~~~~-~~~~~~~~~~~~ 101 (312)
+-|.|+|.-|.++.-+ . ++.. ||.|+..|+- |.--+-. .++..| +.+...+.+.+.
T Consensus 251 ~vPmi~fakG~g~~Le---~----l~~t---G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~m 320 (359)
T KOG2872|consen 251 PVPMILFAKGSGGALE---E----LAQT---GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQM 320 (359)
T ss_pred CCceEEEEcCcchHHH---H----HHhc---CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHH
Confidence 3588999999765432 2 6665 9999999974 1111100 122223 344455556666
Q ss_pred HHHHhhcCCCcEEEEeec
Q 021479 102 IRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 102 i~~~~~~~~~~~~lvGhS 119 (312)
++.. +..+.+.=+||-
T Consensus 321 v~~f--G~~ryI~NLGHG 336 (359)
T KOG2872|consen 321 VKDF--GKSRYIANLGHG 336 (359)
T ss_pred HHHh--CccceEEecCCC
Confidence 7776 445456667774
No 300
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=41.18 E-value=56 Score=25.87 Aligned_cols=20 Identities=30% Similarity=0.273 Sum_probs=17.8
Q ss_pred EEEeechHHHHHHHHHHhcc
Q 021479 114 VLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~p 133 (312)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999998755
No 301
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=41.00 E-value=85 Score=25.57 Aligned_cols=16 Identities=0% Similarity=0.046 Sum_probs=12.9
Q ss_pred CccEEEeccCCCccCcc
Q 021479 67 NASISAIGSAAQTKKNY 83 (312)
Q Consensus 67 ~~~vi~~D~~G~G~s~~ 83 (312)
+-.+|++| ||||..++
T Consensus 55 ~~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDT 70 (287)
T ss_pred CCeEEEEE-CCCCCCCC
Confidence 45789999 89998863
No 302
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=40.74 E-value=22 Score=29.26 Aligned_cols=22 Identities=32% Similarity=0.581 Sum_probs=18.6
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+-++.|-|.|+.+|..++...+
T Consensus 97 p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred CCEEEEECHHHHHHHHHHcCCH
Confidence 5679999999999999987543
No 303
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=40.25 E-value=34 Score=29.16 Aligned_cols=29 Identities=21% Similarity=0.484 Sum_probs=22.7
Q ss_pred cEEEEeechHHHHHHHHHHhccccceEEE
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEKVIYYI 140 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 140 (312)
+=++.|-|.|+.+|..+|...++.+..+.
T Consensus 112 p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 112 PRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred CceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 66799999999999999996555444433
No 304
>PHA00350 putative assembly protein
Probab=38.82 E-value=56 Score=28.00 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=28.4
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCC
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQ 78 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~ 78 (312)
|.+++|.+|+...+.-+...+.+.+.+|..|++ +.+|-
T Consensus 3 I~l~tG~pGSGKT~~aV~~~i~palk~GR~V~T-NI~Gl 40 (399)
T PHA00350 3 IYAIVGRPGSYKSYEAVVYHIIPALKDGRKVIT-NIPGL 40 (399)
T ss_pred eEEEecCCCCchhHHHHHHHHHHHHHCCCEEEE-CCCCC
Confidence 678899999988887777677788877765543 66653
No 305
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=37.89 E-value=43 Score=30.00 Aligned_cols=24 Identities=21% Similarity=0.106 Sum_probs=19.2
Q ss_pred cCCCcEEEEeechHHHHHHHHHHhc
Q 021479 108 NTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 108 ~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
++. |-.++|||+|=..|+..|--.
T Consensus 263 GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCC-CCEEeecCHHHHHHHHHhCCC
Confidence 344 889999999999888887544
No 306
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=37.36 E-value=46 Score=27.17 Aligned_cols=22 Identities=36% Similarity=0.446 Sum_probs=18.7
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+-++.|.|.|+.+|..++....
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCCc
Confidence 5679999999999999987544
No 307
>COG4099 Predicted peptidase [General function prediction only]
Probab=36.83 E-value=15 Score=29.81 Aligned_cols=26 Identities=19% Similarity=0.163 Sum_probs=21.1
Q ss_pred CCcEEEEeecCCCCCChhHHHHHHHh
Q 021479 243 QSKIAFLFGVDDHWGPQELYEEISEQ 268 (312)
Q Consensus 243 ~~P~lii~G~~D~~~~~~~~~~~~~~ 268 (312)
+.|++++|+.+|+++|.+.+.-+.+.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~ 340 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYER 340 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHH
Confidence 67999999999999999876554443
No 308
>PF03283 PAE: Pectinacetylesterase
Probab=36.76 E-value=89 Score=26.47 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHH-hhcCCCcEEEEeechHHHHHHHHHH
Q 021479 94 QVEHKMDFIRQE-LQNTEVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 94 ~~~~~~~~i~~~-~~~~~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
.++.+++.+... +++ .++++|-|-|.||.-++..+.
T Consensus 139 i~~avl~~l~~~gl~~-a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPN-AKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHhcCcc-cceEEEeccChHHHHHHHHHH
Confidence 444444444443 222 347999999999998887653
No 309
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.60 E-value=49 Score=27.27 Aligned_cols=21 Identities=38% Similarity=0.582 Sum_probs=17.7
Q ss_pred CCcEEEEeechHHHHHHHHHH
Q 021479 110 EVPIVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~ia~~~a~ 130 (312)
..+.++.|||+|=+.|+..+.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 457899999999988887765
No 310
>PLN02840 tRNA dimethylallyltransferase
Probab=36.13 E-value=2.9e+02 Score=24.12 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=48.1
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccC----CCc----cC--------------ccCCCCCcchHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSA----AQT----KK--------------NYDHGRLFSLDEQ 94 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~----G~G----~s--------------~~~~~~~~~~~~~ 94 (312)
+..+|++-|-.++... .+...+++.+. ..++..|-. |.- .. -..+...|+..++
T Consensus 20 ~~~vi~I~GptgsGKT--tla~~La~~~~--~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 20 KEKVIVISGPTGAGKS--RLALELAKRLN--GEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred CCeEEEEECCCCCCHH--HHHHHHHHHCC--CCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 4457888887777654 44555666654 356776642 221 11 1134456788889
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeec
Q 021479 95 VEHKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 95 ~~~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
.++..+.++....... ..+|+|-+
T Consensus 96 ~~~A~~~I~~i~~rgk-iPIvVGGT 119 (421)
T PLN02840 96 FDDARRATQDILNRGR-VPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHhcCC-CEEEEcCc
Confidence 8999988888654344 56777754
No 311
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.10 E-value=33 Score=28.77 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=16.7
Q ss_pred EEEeechHHHHHHHHHHhc
Q 021479 114 VLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~ 132 (312)
.+.|.|.||.+|+.++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 6899999999999998643
No 312
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=36.03 E-value=2.4e+02 Score=22.99 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=25.9
Q ss_pred CCCcc--EEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHH
Q 021479 65 GGNAS--ISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVA 125 (312)
Q Consensus 65 ~~~~~--vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia 125 (312)
..|.. =|.+|. |.|.+. +.++..+ ++.-++.+. ..+ ..+++|+|-=.++.
T Consensus 174 ~~GI~~~~IilDP-GiGF~k-------~~~~n~~-ll~~l~~l~-~lg-~Pilvg~SRKsfig 225 (282)
T PRK11613 174 AAGIAKEKLLLDP-GFGFGK-------NLSHNYQ-LLARLAEFH-HFN-LPLLVGMSRKSMIG 225 (282)
T ss_pred HcCCChhhEEEeC-CCCcCC-------CHHHHHH-HHHHHHHHH-hCC-CCEEEEecccHHHH
Confidence 34654 567784 676553 2233222 233334332 234 57899999555444
No 313
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=36.03 E-value=39 Score=29.62 Aligned_cols=58 Identities=19% Similarity=0.021 Sum_probs=34.6
Q ss_pred CcEEEEeecCCCCCChhHHHHHHHhCC------CCcee-ecCCCccccccccccchHHHHHHHHHHHHh
Q 021479 244 SKIAFLFGVDDHWGPQELYEEISEQVP------DVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~~~~~~~------~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~ 305 (312)
.+++...|-.|..+|.-....-.+..+ +-.+. +-++||+..+.+|+ ...+++..|+..
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~----~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPE----SSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChH----HHHHHHHHHHhh
Confidence 355555555665555544333222222 22234 67899999999988 666677777654
No 314
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=35.18 E-value=53 Score=23.84 Aligned_cols=51 Identities=10% Similarity=0.208 Sum_probs=28.8
Q ss_pred HHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechH
Q 021479 59 SLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIG 121 (312)
Q Consensus 59 ~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~G 121 (312)
.+.+.+.++-.++++|-.|.-.|+ ++.++.+.++...- ..+-+++||-+.|
T Consensus 59 ~il~~i~~~~~~i~Ld~~Gk~~sS---------~~fA~~l~~~~~~g---~~~i~F~IGG~~G 109 (155)
T PF02590_consen 59 RILKKIPPNDYVILLDERGKQLSS---------EEFAKKLERWMNQG---KSDIVFIIGGADG 109 (155)
T ss_dssp HHHCTSHTTSEEEEE-TTSEE--H---------HHHHHHHHHHHHTT---S-EEEEEE-BTTB
T ss_pred HHHhhccCCCEEEEEcCCCccCCh---------HHHHHHHHHHHhcC---CceEEEEEecCCC
Confidence 355555567788999987765443 44554444433332 2246899999998
No 315
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=34.53 E-value=1.4e+02 Score=22.58 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=35.2
Q ss_pred CceEEEEEcCCCCchhcH---HHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHH
Q 021479 36 PKLHVLFVPGNPGVITFY---KDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~---~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
.+++++++||.....-.+ ..+...|.+. .....++.+.--|||... .....+..+.+.+|+++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~~~~~~~~p~~gH~~~~-----~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GKPVELLIFPGEGHGFGN-----PENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TSSEEEEEETT-SSSTTS-----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CCCEEEEEcCcCCCCCCC-----chhHHHHHHHHHHHHHHH
Confidence 467899999976543222 3333334333 223555555555775543 112336777778888775
No 316
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.46 E-value=2.3e+02 Score=22.30 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=42.9
Q ss_pred CceEEEEEcCCCCc--hhcH-HHHHHHHHHHcCCCccEEEeccCCCc-----cCcc---CCCCCcchHHHHH--HHHHHH
Q 021479 36 PKLHVLFVPGNPGV--ITFY-KDFVQSLYEHLGGNASISAIGSAAQT-----KKNY---DHGRLFSLDEQVE--HKMDFI 102 (312)
Q Consensus 36 ~~~~iv~~HG~~~~--~~~~-~~~~~~l~~~l~~~~~vi~~D~~G~G-----~s~~---~~~~~~~~~~~~~--~~~~~i 102 (312)
.++.|+||+=.... ...| +.+...+.+. |+.|..++...-- ..+. ..+....+-+... .+.+.|
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~l---G~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l 106 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPL---GIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPI 106 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHC---CCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHH
Confidence 35679999976633 3333 2222222222 7888877765210 0000 1111222222221 233445
Q ss_pred HHHhhcCCCcEEEEeechHHHHHHHH
Q 021479 103 RQELQNTEVPIVLVGHSIGAYVALEM 128 (312)
Q Consensus 103 ~~~~~~~~~~~~lvGhS~Gg~ia~~~ 128 (312)
++... . -..++|.|.|+.++...
T Consensus 107 ~~~~~--~-G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 107 REAVK--N-GTPYIGWSAGANVAGPT 129 (233)
T ss_pred HHHHH--C-CCEEEEECHHHHhhhcc
Confidence 54422 2 37899999999885543
No 317
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=34.44 E-value=1.5e+02 Score=21.60 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=33.0
Q ss_pred HHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHH
Q 021479 57 VQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGA 122 (312)
Q Consensus 57 ~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg 122 (312)
...+.+.++.+-.+|++|-+|--.|+ ++.++.+.++... +..+-+++||-+.|=
T Consensus 57 ~~~il~~l~~~~~~i~LDe~Gk~~sS---------~~fA~~l~~~~~~---g~~~i~F~IGGa~G~ 110 (157)
T PRK00103 57 GERILAALPKGARVIALDERGKQLSS---------EEFAQELERWRDD---GRSDVAFVIGGADGL 110 (157)
T ss_pred HHHHHhhCCCCCEEEEEcCCCCcCCH---------HHHHHHHHHHHhc---CCccEEEEEcCcccc
Confidence 34455566656679999987765443 4555555444222 223468899988883
No 318
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=34.39 E-value=2.7e+02 Score=23.09 Aligned_cols=62 Identities=10% Similarity=0.076 Sum_probs=37.4
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHH
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
..-++|.+.|.-.++-.-.- |..+ ||+|..+-++..-.-+ ..+.....+.+..|+..+++.+
T Consensus 5 ~~~VvvamSgGVDSsVaa~L----l~~~---g~~v~gv~M~nWd~~d-e~~s~cp~e~D~~da~~Vc~~L 66 (377)
T KOG2805|consen 5 PDRVVVAMSGGVDSSVAARL----LAAR---GYNVTGVFMKNWDSLD-EFGSQCPAERDWKDAKRVCKQL 66 (377)
T ss_pred cceEEEEecCCchHHHHHHH----HHhc---CCCeeEEeeecccccc-ccccCCCchhhHHHHHHHHHHh
Confidence 34567777776665533222 4444 8999998888763222 3333556666666666666665
No 319
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.86 E-value=37 Score=27.60 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=18.0
Q ss_pred EEEEeechHHHHHHHHHHhcc
Q 021479 113 IVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p 133 (312)
=.++|.|.||.+|+.++..++
T Consensus 36 D~i~GTSaGaiia~~la~g~~ 56 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGYS 56 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCcC
Confidence 478999999999999987653
No 320
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=33.29 E-value=85 Score=22.64 Aligned_cols=19 Identities=37% Similarity=0.440 Sum_probs=16.9
Q ss_pred CcEEEEeechHHHHHHHHH
Q 021479 111 VPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a 129 (312)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3678899999999999998
No 321
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=32.79 E-value=1e+02 Score=21.16 Aligned_cols=40 Identities=8% Similarity=-0.115 Sum_probs=28.8
Q ss_pred CceEEEEEcC--------CCCchhcHHHHHHHHHHHcCCCccEEEecc
Q 021479 36 PKLHVLFVPG--------NPGVITFYKDFVQSLYEHLGGNASISAIGS 75 (312)
Q Consensus 36 ~~~~iv~~HG--------~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~ 75 (312)
+++++|.+.+ +.+......+.+..+.+.++.+.+++.+|.
T Consensus 21 ~~~vvV~F~A~~~~~~~~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdv 68 (119)
T cd02952 21 GKPIFILFYGDKDPDGQSWCPDCVKAEPVVREALKAAPEDCVFIYCDV 68 (119)
T ss_pred CCeEEEEEEccCCCCCCCCCHhHHhhchhHHHHHHHCCCCCEEEEEEc
Confidence 4677887777 566666667777778777765678888873
No 322
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=32.54 E-value=41 Score=24.79 Aligned_cols=22 Identities=27% Similarity=0.080 Sum_probs=17.5
Q ss_pred CcEEEEeechHHHHHHHHHHhc
Q 021479 111 VPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 111 ~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
..-.+.|-|.||.+|+.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3677999999999998888763
No 323
>PRK13938 phosphoheptose isomerase; Provisional
Probab=32.47 E-value=1.7e+02 Score=22.27 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 93 EQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 93 ~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+.++++.+.+...+. .+.+++++|..-.|.+|..++.+..
T Consensus 29 ~~~~~~a~~~~~~l~-~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 29 EAARAIGDRLIAGYR-AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 334444443333232 3458999999999999999998764
No 324
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=32.47 E-value=1.4e+02 Score=20.00 Aligned_cols=78 Identities=18% Similarity=0.271 Sum_probs=44.4
Q ss_pred CceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEE
Q 021479 36 PKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVL 115 (312)
Q Consensus 36 ~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 115 (312)
..|+|+|.--+.. |-..++.+...+...+.|+-+|...+|. .+++.. .++.... ... .+++
T Consensus 13 ~~~VVifSKs~C~----~c~~~k~ll~~~~v~~~vvELD~~~~g~---------eiq~~l---~~~tg~~--tvP-~vFI 73 (104)
T KOG1752|consen 13 ENPVVIFSKSSCP----YCHRAKELLSDLGVNPKVVELDEDEDGS---------EIQKAL---KKLTGQR--TVP-NVFI 73 (104)
T ss_pred cCCEEEEECCcCc----hHHHHHHHHHhCCCCCEEEEccCCCCcH---------HHHHHH---HHhcCCC--CCC-EEEE
Confidence 3567777663222 2233555666676678899888765442 122211 1111111 234 6999
Q ss_pred EeechHHHHHHHHHHhc
Q 021479 116 VGHSIGAYVALEMLKRS 132 (312)
Q Consensus 116 vGhS~Gg~ia~~~a~~~ 132 (312)
-|.+.||.--+.-+...
T Consensus 74 ~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 74 GGKFIGGASDLMALHKS 90 (104)
T ss_pred CCEEEcCHHHHHHHHHc
Confidence 99999998766655543
No 325
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=32.28 E-value=1.5e+02 Score=21.69 Aligned_cols=47 Identities=11% Similarity=-0.021 Sum_probs=22.4
Q ss_pred EEeccCCCccCccCCCCC--cchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 71 SAIGSAAQTKKNYDHGRL--FSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 71 i~~D~~G~G~s~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
|++| +|||..+...... ..=.+...++...+...+...+-++++.--
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~~l~~~L~~~G~~v~~~r~ 50 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIALKLAKLLEAAGAKVVLTRD 50 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 4455 8999886322222 222234445555555443322334555544
No 326
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=32.00 E-value=39 Score=27.76 Aligned_cols=17 Identities=29% Similarity=0.313 Sum_probs=15.4
Q ss_pred EEEeechHHHHHHHHHH
Q 021479 114 VLVGHSIGAYVALEMLK 130 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~ 130 (312)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999986
No 327
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=31.89 E-value=1.2e+02 Score=24.31 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=43.3
Q ss_pred CcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCccccccccccchHHHHHHHHHHHHhh
Q 021479 244 SKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCSEAGSAWVASHVAGLIKNK 306 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v~~~l~~~ 306 (312)
.|+.++=+. +=-....+++.+.+|+.++. +-+..+++.=+++++.-.+....+.+||.++
T Consensus 6 ~~IgvFDSG---VGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~ 66 (269)
T COG0796 6 PPIGVFDSG---VGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLER 66 (269)
T ss_pred CeEEEEECC---CCcHHHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 456665332 23456788999999999999 8889999998887755556666666777654
No 328
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=31.58 E-value=1.7e+02 Score=19.81 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=23.7
Q ss_pred EEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCc
Q 021479 41 LFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQT 79 (312)
Q Consensus 41 v~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G 79 (312)
|++||-+|+... .++..+++.+ ++.++.+|..-..
T Consensus 1 ill~G~~G~GKT--~l~~~la~~l--~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKT--TLARALAQYL--GFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHH--HHHHHHHHHT--TSEEEEEETTHHH
T ss_pred CEEECcCCCCee--HHHHHHHhhc--ccccccccccccc
Confidence 688999888765 4455566665 4777777765443
No 329
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.06 E-value=51 Score=26.03 Aligned_cols=21 Identities=38% Similarity=0.314 Sum_probs=18.7
Q ss_pred EEEEeechHHHHHHHHHHhcc
Q 021479 113 IVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p 133 (312)
-.++|-|.|+.+|..+|...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999999998765
No 330
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=31.03 E-value=2.5e+02 Score=22.96 Aligned_cols=75 Identities=23% Similarity=0.263 Sum_probs=42.8
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccC----C----CccC--------------ccCCCCCcchHHHHHH
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSA----A----QTKK--------------NYDHGRLFSLDEQVEH 97 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~----G----~G~s--------------~~~~~~~~~~~~~~~~ 97 (312)
||++-|-+++... .+...+++.+ +..++..|-. | ..+- -..+...++..++..+
T Consensus 1 vi~i~G~t~~GKs--~la~~l~~~~--~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~ 76 (287)
T TIGR00174 1 VIFIMGPTAVGKS--QLAIQLAKKL--NAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTL 76 (287)
T ss_pred CEEEECCCCCCHH--HHHHHHHHhC--CCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHH
Confidence 3566676665543 4444465554 3567777742 2 1111 1123345677778888
Q ss_pred HHHHHHHHhhcCCCcEEEEeec
Q 021479 98 KMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 98 ~~~~i~~~~~~~~~~~~lvGhS 119 (312)
..+.|+....... .++++|-|
T Consensus 77 a~~~i~~~~~~g~-~pi~vGGT 97 (287)
T TIGR00174 77 ALNAIADITARGK-IPLLVGGT 97 (287)
T ss_pred HHHHHHHHHhCCC-CEEEEcCc
Confidence 8888887644333 57788755
No 331
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=30.91 E-value=2.4e+02 Score=23.85 Aligned_cols=37 Identities=11% Similarity=-0.067 Sum_probs=23.4
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCcc
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTK 80 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~ 80 (312)
..+|+.+.|.-.|+-.-.- |.+. ||.|+.+-+.-+..
T Consensus 4 ~kV~v~mSGGVDSSVaA~l----Lk~Q---GyeViGl~m~~~~~ 40 (356)
T COG0482 4 KKVLVGMSGGVDSSVAAYL----LKEQ---GYEVIGLFMKNWDE 40 (356)
T ss_pred cEEEEEccCCHHHHHHHHH----HHHc---CCeEEEEEEEeecc
Confidence 3457777776665533222 4444 99999998876653
No 332
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.71 E-value=96 Score=24.70 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=19.1
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3579999999999999998765
No 333
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.57 E-value=82 Score=24.93 Aligned_cols=23 Identities=35% Similarity=0.492 Sum_probs=18.3
Q ss_pred EEEEeechHHHHHHHHHHhccccc
Q 021479 113 IVLVGHSIGAYVALEMLKRSSEKV 136 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p~~v 136 (312)
=.+.|-|+|+.+|..++. .++++
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChHHH
Confidence 379999999999999984 34433
No 334
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=30.42 E-value=73 Score=27.71 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=23.6
Q ss_pred CcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCCCcccccccc
Q 021479 244 SKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERHGHTHNFCCS 288 (312)
Q Consensus 244 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~gH~~~~~~~ 288 (312)
.-+++..|+.|++......... -+..... |++++|+.-+-.+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~~---~~~~~~~~I~g~~Hc~Dl~~~ 419 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSDS---SDSVPAIVIPGGAHCSDLYPP 419 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-S---SSSEEEEEETT--TTGGGS--
T ss_pred CeEEeeCCCCCCcccccCCCCC---CCCcccEEECCCeeeccccCC
Confidence 3799999999999877733321 1222233 8999998777643
No 335
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=30.12 E-value=3.2e+02 Score=22.70 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=43.9
Q ss_pred HHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--cce
Q 021479 60 LYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--KVI 137 (312)
Q Consensus 60 l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~ 137 (312)
+.....++|.++.+|-+|....+ ..+-+....+...++...+.....++++-.+.-|.-++.-+..+-+ .+.
T Consensus 189 l~~~~~~~~D~ViIDTaGr~~~~------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~~ 262 (318)
T PRK10416 189 IQAAKARGIDVLIIDTAGRLHNK------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGLT 262 (318)
T ss_pred HHHHHhCCCCEEEEeCCCCCcCC------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCCC
Confidence 33444558999999999875442 1222233344444443322223357788888777777766655432 467
Q ss_pred EEEE
Q 021479 138 YYIG 141 (312)
Q Consensus 138 ~lvl 141 (312)
++|+
T Consensus 263 giIl 266 (318)
T PRK10416 263 GIIL 266 (318)
T ss_pred EEEE
Confidence 7774
No 336
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=30.12 E-value=51 Score=24.71 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=19.0
Q ss_pred EEEEEcC---CCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 39 HVLFVPG---NPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 39 ~iv~~HG---~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
.||++|. ...+......++..+.+ +||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~---~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKE---KGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHH---CCCEEEEHH
Confidence 4888994 22333444454444333 499998764
No 337
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=30.08 E-value=3.5e+02 Score=23.03 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=24.9
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCcc
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTK 80 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~ 80 (312)
|||+|+..- ..|+.++..|.+. |+.|..+-..+.+.
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~---G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQ---GHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHC---CCEEEEEecCCCCC
Confidence 789987442 4578877776665 88888876665544
No 338
>PF07931 CPT: Chloramphenicol phosphotransferase-like protein; InterPro: IPR012853 The members of this family are all similar to chloramphenicol 3-O phosphotransferase (CPT, Q56148 from SWISSPROT) expressed by Streptomyces venezuelae. Chloramphenicol (Cm) is a metabolite produced by this bacterium that can inhibit ribosomal peptidyl transferase activity and therefore protein production. By transferring a phosphate group to the C-3 hydroxyl group of Cm, CPT inactivates this potentially lethal metabolite [, ]. ; GO: 0005524 ATP binding, 0016740 transferase activity; PDB: 1QHX_A 1QHN_A 1GRR_A 1QHY_A 1QHS_A 1GRQ_A.
Probab=29.71 E-value=66 Score=23.91 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=25.1
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
||+++|.+++... .+++.|.+.+...|-.+.+|
T Consensus 3 iI~LNG~sSSGKS--sia~~Lq~~~~~p~~~l~~D 35 (174)
T PF07931_consen 3 IIILNGPSSSGKS--SIARALQERLPEPWLHLSVD 35 (174)
T ss_dssp EEEEEE-TTSSHH--HHHHHHHHHSSS-EEEEEHH
T ss_pred EEEEeCCCCCCHH--HHHHHHHHhCcCCeEEEecC
Confidence 8999999988776 77777888887677777777
No 339
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=28.91 E-value=1.4e+02 Score=23.90 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=39.3
Q ss_pred HHHHcCCCccEEEeccCCC-ccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHH----HHHHhccc
Q 021479 60 LYEHLGGNASISAIGSAAQ-TKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVAL----EMLKRSSE 134 (312)
Q Consensus 60 l~~~l~~~~~vi~~D~~G~-G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~----~~a~~~p~ 134 (312)
+++. |-.|+++.+--. |.+. ......++++.++.+.++.+.... .+..++++.| ||.++. .+..++-.
T Consensus 166 M~~A---GaDiiv~H~GlT~gG~~-Ga~~~~sl~~a~~~~~~i~~aa~~-v~~dii~l~h--GGPI~~p~D~~~~l~~t~ 238 (268)
T PF09370_consen 166 MAEA---GADIIVAHMGLTTGGSI-GAKTALSLEEAAERIQEIFDAARA-VNPDIIVLCH--GGPIATPEDAQYVLRNTK 238 (268)
T ss_dssp HHHH---T-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHC-C-TT-EEEEE--CTTB-SHHHHHHHHHH-T
T ss_pred HHHc---CCCEEEecCCccCCCCc-CccccCCHHHHHHHHHHHHHHHHH-hCCCeEEEEe--CCCCCCHHHHHHHHhcCC
Confidence 4555 889998876322 1221 223356888888888887777533 5557888888 888764 33444444
Q ss_pred cceEEEE
Q 021479 135 KVIYYIG 141 (312)
Q Consensus 135 ~v~~lvl 141 (312)
.+.|.+-
T Consensus 239 ~~~Gf~G 245 (268)
T PF09370_consen 239 GIHGFIG 245 (268)
T ss_dssp TEEEEEE
T ss_pred CCCEEec
Confidence 4677773
No 340
>PRK06762 hypothetical protein; Provisional
Probab=28.59 E-value=82 Score=22.82 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=22.5
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
|.+|++-|.+|+... .++..+.+.++.++.++..|
T Consensus 2 ~~li~i~G~~GsGKS--T~A~~L~~~l~~~~~~i~~D 36 (166)
T PRK06762 2 TTLIIIRGNSGSGKT--TIAKQLQERLGRGTLLVSQD 36 (166)
T ss_pred CeEEEEECCCCCCHH--HHHHHHHHHhCCCeEEecHH
Confidence 468888999988775 55555666664344444434
No 341
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=28.57 E-value=65 Score=27.61 Aligned_cols=62 Identities=19% Similarity=0.288 Sum_probs=38.2
Q ss_pred HHHHHHcCCCccEEEeccCCCccCcc---------CCCCCcc--hHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHH
Q 021479 58 QSLYEHLGGNASISAIGSAAQTKKNY---------DHGRLFS--LDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVAL 126 (312)
Q Consensus 58 ~~l~~~l~~~~~vi~~D~~G~G~s~~---------~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~ 126 (312)
..+++.|.++-.|-.+-+||.-..+. ..+...+ +..- +++.++++.+ +++-+|.||||.=++
T Consensus 273 ~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L------~l~~~a~SlGgveSL 345 (396)
T COG0626 273 LKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSL------KLFKLAESLGGVESL 345 (396)
T ss_pred HHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhC------CccEEeccCCCcccc
Confidence 34556666667777777777322210 0111222 3333 7788888887 799999999987544
No 342
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=28.36 E-value=2.7e+02 Score=21.15 Aligned_cols=64 Identities=17% Similarity=0.120 Sum_probs=41.6
Q ss_pred CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--cceEEEE
Q 021479 66 GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--KVIYYIG 141 (312)
Q Consensus 66 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 141 (312)
++++++.+|-+|....+ .+..+.+.++++.. ... .++|+=-+..+.-.+..+..+-+ .+.++|+
T Consensus 82 ~~~D~vlIDT~Gr~~~d---------~~~~~el~~~~~~~--~~~-~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIl 147 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPRD---------EELLEELKKLLEAL--NPD-EVHLVLSATMGQEDLEQALAFYEAFGIDGLIL 147 (196)
T ss_dssp TTSSEEEEEE-SSSSTH---------HHHHHHHHHHHHHH--SSS-EEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEE
T ss_pred cCCCEEEEecCCcchhh---------HHHHHHHHHHhhhc--CCc-cceEEEecccChHHHHHHHHHhhcccCceEEE
Confidence 37999999998875432 55667777777776 344 56666666666666655544332 4789885
No 343
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=28.21 E-value=1e+02 Score=21.19 Aligned_cols=34 Identities=6% Similarity=0.057 Sum_probs=18.4
Q ss_pred CCCceEEEEEc-CCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 34 DDPKLHVLFVP-GNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 34 ~~~~~~iv~~H-G~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
++.+++||++. |...+...+.. +... ||+|+.+|
T Consensus 84 ~~~~~vvvyC~~~G~rs~~a~~~----L~~~---G~~v~~L~ 118 (128)
T cd01520 84 ERDPKLLIYCARGGMRSQSLAWL----LESL---GIDVPLLE 118 (128)
T ss_pred CCCCeEEEEeCCCCccHHHHHHH----HHHc---CCceeEeC
Confidence 45567888884 44444444322 3223 78766543
No 344
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=27.86 E-value=1.2e+02 Score=23.47 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=22.8
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEecc
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGS 75 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~ 75 (312)
++.|.|++=.+.+.+. +.+.....+.|. .|..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~-~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSED-DFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccch-HHHHHHHHHHHHHcCCeeeeeec
Confidence 5679999987776554 333333444442 2677766654
No 345
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=27.67 E-value=1.7e+02 Score=18.73 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=27.2
Q ss_pred CCceEEEEEc-CCCCchhcHHHHHHHHHHHcCCCccEEEecc
Q 021479 35 DPKLHVLFVP-GNPGVITFYKDFVQSLYEHLGGNASISAIGS 75 (312)
Q Consensus 35 ~~~~~iv~~H-G~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~ 75 (312)
.++++++++. .+........+.+..+.+.+..++.++.+|.
T Consensus 12 ~~~~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~ 53 (97)
T cd02949 12 SDRLILVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDI 53 (97)
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEEC
Confidence 3456666666 4555556667777777777765677777774
No 346
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=27.48 E-value=3e+02 Score=21.43 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=34.9
Q ss_pred ccccceeeeeccccceeeeecCCCCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEE
Q 021479 12 KSVNLRLSNVSIYTAEVLEIEADDPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISA 72 (312)
Q Consensus 12 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~ 72 (312)
.....-|.+++-++.......-.+-+|.+|.+||.+... -++++..+++. ++...++
T Consensus 169 t~RalvFT~VstGRSPMVAirV~~lKP~aVVlHGi~~~~--vD~lAikiAe~--e~IpLvv 225 (241)
T COG1709 169 TERALVFTKVSTGRSPMVAIRVSPLKPAAVVLHGIPPDN--VDELAIKIAEI--ERIPLVV 225 (241)
T ss_pred cceEEEEEeccCCCCceEEEEccCCCccEEEEecCCccc--hhHHHHHHHhh--cCCceEE
Confidence 344455666666666666666666788999999987642 34545555554 2455544
No 347
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=27.16 E-value=62 Score=19.84 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=30.5
Q ss_pred EEEeecCCCCCChhHHHHHHHh--CCCCcee-ecCCCccccccccccchHHHHHHH
Q 021479 247 AFLFGVDDHWGPQELYEEISEQ--VPDVPLA-IERHGHTHNFCCSEAGSAWVASHV 299 (312)
Q Consensus 247 lii~G~~D~~~~~~~~~~~~~~--~~~~~~~-i~~~gH~~~~~~~~~~~~~v~~~v 299 (312)
.+=.|..|.+.|......+.+. ++..++- +.=..++..++-|++..+.+.+.+
T Consensus 4 ~in~Gr~dg~~~~~iv~~i~~~~gi~~~~IG~I~I~~~~S~vev~~~~a~~v~~~l 59 (74)
T PF03880_consen 4 FINVGRKDGLTPRDIVGAICNEAGIPGRDIGRIDIFDNFSFVEVPEEVAEKVLEAL 59 (74)
T ss_dssp EES-SGGGT--HHHHHHHHHTCTTB-GGGEEEEEE-SS-EEEEE-TT-HHHHHHHH
T ss_pred EEEcccccCCCHHHHHHHHHhccCCCHHhEEEEEEeeeEEEEEECHHHHHHHHHHh
Confidence 4446889999999988888886 3555555 555566777888775554444443
No 348
>COG5023 Tubulin [Cytoskeleton]
Probab=27.16 E-value=1.2e+02 Score=25.64 Aligned_cols=53 Identities=23% Similarity=0.410 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCC-CcEEEEeechHHHHHH--------HHHHhccccceEEEEecc
Q 021479 92 DEQVEHKMDFIRQELQNTE-VPIVLVGHSIGAYVAL--------EMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~-~~~~lvGhS~Gg~ia~--------~~a~~~p~~v~~lvl~~p 144 (312)
.+.++++.+.|+..-+..+ -.=+++=||+||.... ++..++|+++..-.-+.|
T Consensus 110 ~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P 171 (443)
T COG5023 110 KEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFP 171 (443)
T ss_pred HHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEecc
Confidence 5678888888877532221 1357888888876443 344678877665555555
No 349
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=26.78 E-value=4.2e+02 Score=22.95 Aligned_cols=98 Identities=8% Similarity=0.053 Sum_probs=58.8
Q ss_pred EEEcCCCCchh-cHHHHHHHHHHHcCCCccEEEeccCCCccCccC----------------------CCCCcchHHHHHH
Q 021479 41 LFVPGNPGVIT-FYKDFVQSLYEHLGGNASISAIGSAAQTKKNYD----------------------HGRLFSLDEQVEH 97 (312)
Q Consensus 41 v~~HG~~~~~~-~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s~~~----------------------~~~~~~~~~~~~~ 97 (312)
|++=|...+.. .+..+-..+.+ .|.+++.+|.==.|..... ......++.+++.
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~---~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEA---QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHH---CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 33445555443 34443333333 4899999996433332110 0011234446666
Q ss_pred HHHHHHHHhhcCC-CcEEEEeechHHHHHHHHHHhccccceEEEE
Q 021479 98 KMDFIRQELQNTE-VPIVLVGHSIGAYVALEMLKRSSEKVIYYIG 141 (312)
Q Consensus 98 ~~~~i~~~~~~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 141 (312)
+..++..++.+.. .-++-+|-|.|..++.......|--+-+++.
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 6777777654221 2588999999999999999999976777764
No 350
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=26.74 E-value=1.1e+02 Score=18.74 Aligned_cols=10 Identities=20% Similarity=0.438 Sum_probs=7.8
Q ss_pred eEEEEEcCCC
Q 021479 38 LHVLFVPGNP 47 (312)
Q Consensus 38 ~~iv~~HG~~ 47 (312)
|.++++||..
T Consensus 32 ~~~~lvhGga 41 (71)
T PF10686_consen 32 PDMVLVHGGA 41 (71)
T ss_pred CCEEEEECCC
Confidence 5678999866
No 351
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=26.22 E-value=1.4e+02 Score=22.96 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhhc-CCCcEEEEeechHHHHHHHH
Q 021479 93 EQVEHKMDFIRQELQN-TEVPIVLVGHSIGAYVALEM 128 (312)
Q Consensus 93 ~~~~~~~~~i~~~~~~-~~~~~~lvGhS~Gg~ia~~~ 128 (312)
...+.+.+.|++.... ..-..+++-||+||....-+
T Consensus 105 ~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~ 141 (216)
T PF00091_consen 105 EALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGL 141 (216)
T ss_dssp HHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHH
T ss_pred ccccccccccchhhccccccccceecccccceecccc
Confidence 3556666666665421 13368999999988754433
No 352
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=25.99 E-value=4.2e+02 Score=22.65 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=27.0
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
|+.-.|-+.+....+..+..|...|...|.|..++
T Consensus 3 VlVY~G~G~~~~sv~~~~~~Lr~~l~p~y~V~~v~ 37 (367)
T PF09825_consen 3 VLVYNGPGTSPESVRHTLESLRRLLSPHYAVIPVT 37 (367)
T ss_pred EEEEecCCCCHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 56667888888887787777777676689998876
No 353
>PRK14974 cell division protein FtsY; Provisional
Probab=25.84 E-value=4e+02 Score=22.40 Aligned_cols=64 Identities=13% Similarity=0.201 Sum_probs=40.9
Q ss_pred CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc--ccceEEEE
Q 021479 66 GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS--EKVIYYIG 141 (312)
Q Consensus 66 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl 141 (312)
.++.++.+|-+|....+ .+..+.+..+.+.. ... .++++.-+.-|.-+..-+..+. -.+.++|+
T Consensus 221 ~~~DvVLIDTaGr~~~~---------~~lm~eL~~i~~~~--~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 221 RGIDVVLIDTAGRMHTD---------ANLMDELKKIVRVT--KPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred CCCCEEEEECCCccCCc---------HHHHHHHHHHHHhh--CCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 36889999988765432 34455555555554 334 5778877777776776665543 25788885
No 354
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=25.69 E-value=1.3e+02 Score=19.64 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=28.6
Q ss_pred ccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 021479 68 ASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHS 119 (312)
Q Consensus 68 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS 119 (312)
--.+.++++|..-.. -..++.+++.+.....++.+ .++.+++|.=
T Consensus 29 TGFfl~eYrGvsPd~---wkgf~~~EDpE~aik~i~D~----s~~AVlI~tV 73 (110)
T COG4075 29 TGFFLHEYRGVSPDK---WKGFSKEEDPESAIKAIRDL----SDKAVLIGTV 73 (110)
T ss_pred ceEEEEEecCcChhH---hcCcccccCHHHHHHHHHHh----hhceEEEEEe
Confidence 345778888864332 23456677777777777776 2367777754
No 355
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=25.67 E-value=2.8e+02 Score=24.76 Aligned_cols=15 Identities=33% Similarity=0.423 Sum_probs=12.5
Q ss_pred CCcEEEEeechHHHH
Q 021479 110 EVPIVLVGHSIGAYV 124 (312)
Q Consensus 110 ~~~~~lvGhS~Gg~i 124 (312)
..++.|+|-|.|+.-
T Consensus 217 p~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 217 PSRVTLFGESAGAAS 231 (601)
T ss_pred cceEEEeccccchhh
Confidence 358999999999763
No 356
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=25.58 E-value=56 Score=27.33 Aligned_cols=18 Identities=39% Similarity=0.484 Sum_probs=14.9
Q ss_pred EEEEeechHHHHHHHHHH
Q 021479 113 IVLVGHSIGAYVALEMLK 130 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~ 130 (312)
-.++|||+|=+.|+..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 468999999988888774
No 357
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=25.49 E-value=2.9e+02 Score=22.34 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=20.3
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCCCc
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAAQT 79 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G~G 79 (312)
++|++-|.|+++.. .++..+.+.+. .++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKT--t~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKT--TRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHH--HHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHH--HHHHHHHHHHHhcCCEEEEEcccccc
Confidence 48889999998765 33334444442 36888888754444
No 358
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.01 E-value=71 Score=25.37 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=18.9
Q ss_pred cEEEEeechHHHHHHHHHHhcc
Q 021479 112 PIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999998765
No 359
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=24.94 E-value=1.3e+02 Score=16.37 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=22.9
Q ss_pred CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHH
Q 021479 66 GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 66 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
.+|.+.++|+||+-.. ..++++..+.+.+.+...
T Consensus 12 ~~y~~~~pdlpg~~t~------G~t~eea~~~~~eal~~~ 45 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQ------GDTLEEALENAKEALELW 45 (48)
T ss_dssp SSEEEEETTCCTCEEE------ESSHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhc------CCCHHHHHHHHHHHHHHH
Confidence 3799999999987522 235677666666666543
No 360
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=24.91 E-value=2.7e+02 Score=20.21 Aligned_cols=51 Identities=10% Similarity=0.180 Sum_probs=30.5
Q ss_pred HHHHHcCCCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHH
Q 021479 59 SLYEHLGGNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAY 123 (312)
Q Consensus 59 ~l~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ 123 (312)
.+...+. +-.||++|-+|--.|+ .+.++.+.++... ..+-++++|-+.|=.
T Consensus 58 ~il~~~~-~~~~i~LDe~Gk~~sS---------~~fA~~l~~~~~~----g~~i~FvIGGa~G~~ 108 (153)
T TIGR00246 58 RILAAIG-KAHVVTLDIPGKPWTT---------PQLADTLEKWKTD----GRDVTLLIGGPEGLS 108 (153)
T ss_pred HHHHhCC-CCeEEEEcCCCCcCCH---------HHHHHHHHHHhcc----CCeEEEEEcCCCcCC
Confidence 3555565 3568999988765443 4455444443222 234688999888843
No 361
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=24.48 E-value=91 Score=25.09 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=21.9
Q ss_pred EEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 39 HVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 39 ~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
.||++|-...+......++..+.+. ||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~k---Gy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEK---GYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHC---CCEEEeHH
Confidence 4788897666655556644444444 89998764
No 362
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=24.22 E-value=3.8e+02 Score=23.47 Aligned_cols=64 Identities=17% Similarity=0.122 Sum_probs=41.2
Q ss_pred CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccc--cceEEEE
Q 021479 66 GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSE--KVIYYIG 141 (312)
Q Consensus 66 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 141 (312)
.+|.++.+|-+|.-..+ +...+.+..+.+.. ... .++|+--++-|.-+...|..+.+ .+.++|+
T Consensus 181 ~~~DvViIDTaGr~~~d---------~~lm~El~~i~~~~--~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 181 ENFDIIIVDTSGRHKQE---------DSLFEEMLQVAEAI--QPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCCEEEEECCCCCcch---------HHHHHHHHHHhhhc--CCc-EEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 37899999988853221 34555555555444 233 57888878877777766666543 4778886
No 363
>PLN02200 adenylate kinase family protein
Probab=23.97 E-value=1.5e+02 Score=23.32 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=18.3
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHc
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHL 64 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l 64 (312)
.|.+|++.|.+|+... .+...+++.+
T Consensus 42 ~~~ii~I~G~PGSGKs--T~a~~La~~~ 67 (234)
T PLN02200 42 TPFITFVLGGPGSGKG--TQCEKIVETF 67 (234)
T ss_pred CCEEEEEECCCCCCHH--HHHHHHHHHh
Confidence 5779999999998865 4334455553
No 364
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.51 E-value=57 Score=26.83 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=15.2
Q ss_pred EEEeechHHHHHHHHHH
Q 021479 114 VLVGHSIGAYVALEMLK 130 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~ 130 (312)
.++|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68999999999998874
No 365
>PF10691 DUF2497: Protein of unknown function (DUF2497) ; InterPro: IPR019632 Members of this family belong to the Alphaproteobacteria. The function of the family is not known.
Probab=23.50 E-value=43 Score=20.65 Aligned_cols=21 Identities=5% Similarity=0.208 Sum_probs=16.1
Q ss_pred ccchHHHHHHHHHHHHhhccC
Q 021479 289 EAGSAWVASHVAGLIKNKIPS 309 (312)
Q Consensus 289 ~~~~~~v~~~v~~~l~~~~~~ 309 (312)
+-..+.+.-.+.+||+++++.
T Consensus 37 ~lvremLRPmLkeWLD~nLP~ 57 (73)
T PF10691_consen 37 DLVREMLRPMLKEWLDENLPG 57 (73)
T ss_pred HHHHHHHHHHHHHHHHhccHH
Confidence 445667788889999998864
No 366
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=23.34 E-value=1e+02 Score=23.90 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=21.1
Q ss_pred eEEEEEcCC-CCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 38 LHVLFVPGN-PGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 38 ~~iv~~HG~-~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
..||++|.. ..+......++..+.+ +||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~---~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKE---QGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHH---CCCEEEEhH
Confidence 358888974 4444555554444444 499998875
No 367
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=23.28 E-value=2e+02 Score=22.08 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=31.2
Q ss_pred cCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ecCC
Q 021479 242 NQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IERH 279 (312)
Q Consensus 242 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~~~ 279 (312)
...|++++.|..+...+++..+.+.+.+.+.-+. ++..
T Consensus 52 ~~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 52 FFYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred HhCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 3679999999999988888888899887777766 6655
No 368
>PF08348 PAS_6: YheO-like PAS domain; InterPro: IPR013559 This domain is found in various hypothetical bacterial proteins that are similar to the Escherichia coli protein YheO (P64624 from SWISSPROT). Their function is unknown, but a few members are annotated as being HTH-containing proteins and putative DNA-binding proteins.
Probab=23.09 E-value=1.4e+02 Score=20.52 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=25.8
Q ss_pred hcHHHHHHHHHHHcCCCccEEEeccCCCccC
Q 021479 51 TFYKDFVQSLYEHLGGNASISAIGSAAQTKK 81 (312)
Q Consensus 51 ~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s 81 (312)
..|.+++..+.+.|.+.+.|+.-|+.....|
T Consensus 3 ~~y~~l~~~l~~~lG~~~EVVLHDl~~~~~s 33 (118)
T PF08348_consen 3 KSYIPLVDFLAATLGPNCEVVLHDLSDPEHS 33 (118)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEECCCCCCE
Confidence 4578889999999998999999999865444
No 369
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=22.96 E-value=4.5e+02 Score=21.98 Aligned_cols=81 Identities=17% Similarity=0.267 Sum_probs=44.6
Q ss_pred EEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec--cCCCccC-----------ccCCCCCcchHHHHHHHHHHHHHHhh
Q 021479 41 LFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG--SAAQTKK-----------NYDHGRLFSLDEQVEHKMDFIRQELQ 107 (312)
Q Consensus 41 v~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D--~~G~G~s-----------~~~~~~~~~~~~~~~~~~~~i~~~~~ 107 (312)
|+++|+|+-...-..|+......-. .+.|+.++ .|+.... ........+..+.++.+.+.++..
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~-~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~-- 133 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWG-DGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESR-- 133 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccC-CCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhcc--
Confidence 6778888766665664443222200 06677765 2222211 001122335566666666666665
Q ss_pred cCCCcEEEEeechHHHH
Q 021479 108 NTEVPIVLVGHSIGAYV 124 (312)
Q Consensus 108 ~~~~~~~lvGhS~Gg~i 124 (312)
....+++|+=|++=|..
T Consensus 134 ~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 134 PSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCCCceEEEEECCCChh
Confidence 32558999999987664
No 370
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=22.89 E-value=2.5e+02 Score=22.13 Aligned_cols=63 Identities=10% Similarity=0.195 Sum_probs=38.7
Q ss_pred CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcE--EEEeechHHH-HHHHHHHh
Q 021479 66 GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPI--VLVGHSIGAY-VALEMLKR 131 (312)
Q Consensus 66 ~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~lvGhS~Gg~-ia~~~a~~ 131 (312)
+.=-|..+|-+|+..+. ......+......+.+.+...... +.|+ .++|++|+|. ++..|.++
T Consensus 64 krpIv~lVD~~sQa~gr--reEllGi~~alAhla~a~a~AR~~-GHpvI~Lv~G~A~SGaFLA~GlqA~ 129 (234)
T PF06833_consen 64 KRPIVALVDVPSQAYGR--REELLGINQALAHLAKAYALARLA-GHPVIGLVYGKAMSGAFLAHGLQAN 129 (234)
T ss_pred CCCEEEEEeCCccccch--HHHHhhHHHHHHHHHHHHHHHHHc-CCCeEEEEecccccHHHHHHHHHhc
Confidence 34567789999998884 445666776665555544443222 3344 4789998655 55555553
No 371
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.87 E-value=70 Score=25.41 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=16.4
Q ss_pred EEEeechHHHHHHHHHHh
Q 021479 114 VLVGHSIGAYVALEMLKR 131 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~ 131 (312)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999876
No 372
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=22.76 E-value=1.8e+02 Score=25.47 Aligned_cols=14 Identities=29% Similarity=0.245 Sum_probs=11.4
Q ss_pred cEEEeccCCCccCcc
Q 021479 69 SISAIGSAAQTKKNY 83 (312)
Q Consensus 69 ~vi~~D~~G~G~s~~ 83 (312)
-+|++| ||||..+.
T Consensus 192 ~vIvID-pGHGG~Dp 205 (445)
T PRK10431 192 VIIAID-AGHGGQDP 205 (445)
T ss_pred eEEEEe-CCCCCCCC
Confidence 378888 89999874
No 373
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=22.62 E-value=3.5e+02 Score=20.59 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=31.2
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHcC-CCccEEEeccCCCccCccCCCCCcchHHHHHHHHHHHHHH
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHLG-GNASISAIGSAAQTKKNYDHGRLFSLDEQVEHKMDFIRQE 105 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~i~~~ 105 (312)
+.+|+++||-....--+.. .....+.|. .+.+|-...++|-|-+- ..+.+.++.++|++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~-~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEW-AEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHH-HHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHH-HHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhhh
Confidence 4579999998765433221 222333442 25566666666544332 256777777877764
No 374
>PRK00889 adenylylsulfate kinase; Provisional
Probab=22.47 E-value=1.8e+02 Score=21.23 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=23.1
Q ss_pred ceEEEEEcCCCCchhcHHHHHHHHHHHc-CCCccEEEec
Q 021479 37 KLHVLFVPGNPGVITFYKDFVQSLYEHL-GGNASISAIG 74 (312)
Q Consensus 37 ~~~iv~~HG~~~~~~~~~~~~~~l~~~l-~~~~~vi~~D 74 (312)
++.++.+.|.+|+... .++..++..+ ..+..++.+|
T Consensus 3 ~g~~i~~~G~~GsGKS--T~a~~la~~l~~~g~~v~~id 39 (175)
T PRK00889 3 RGVTVWFTGLSGAGKT--TIARALAEKLREAGYPVEVLD 39 (175)
T ss_pred CCeEEEEECCCCCCHH--HHHHHHHHHHHHcCCeEEEEc
Confidence 3458888899988764 4444555555 2356676665
No 375
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=22.16 E-value=1.4e+02 Score=19.21 Aligned_cols=29 Identities=10% Similarity=0.027 Sum_probs=14.1
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccE
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASI 70 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~v 70 (312)
..+++||++++...+..... .|... ||++
T Consensus 60 ~~~~ivv~C~~G~rs~~aa~----~L~~~---G~~~ 88 (100)
T cd01523 60 DDQEVTVICAKEGSSQFVAE----LLAER---GYDV 88 (100)
T ss_pred CCCeEEEEcCCCCcHHHHHH----HHHHc---Ccee
Confidence 34566666664433322222 24444 8883
No 376
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.00 E-value=3.2e+02 Score=22.13 Aligned_cols=61 Identities=13% Similarity=0.100 Sum_probs=40.4
Q ss_pred hhhcCCcEEEEeecCCCCCChhHHHHHHHhCCCCcee-ec-CCCcccccc-ccccchHHHHHHHHHHHHh
Q 021479 239 MRENQSKIAFLFGVDDHWGPQELYEEISEQVPDVPLA-IE-RHGHTHNFC-CSEAGSAWVASHVAGLIKN 305 (312)
Q Consensus 239 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-i~-~~gH~~~~~-~~~~~~~~v~~~v~~~l~~ 305 (312)
.....+|+.++.|++ ...++..+.+|....+ ++ .-|++...+ .|++..+.+.+.+.+=+++
T Consensus 143 Ag~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~Al~~ 206 (270)
T cd08769 143 AGEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKEALER 206 (270)
T ss_pred HhhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 346789999999965 3456666677998877 65 355444444 3455566677777666653
No 377
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=21.88 E-value=1.1e+02 Score=22.76 Aligned_cols=11 Identities=27% Similarity=0.658 Sum_probs=9.3
Q ss_pred cEEEEeechHH
Q 021479 112 PIVLVGHSIGA 122 (312)
Q Consensus 112 ~~~lvGhS~Gg 122 (312)
..+|||||+--
T Consensus 102 ~tILVGHsL~n 112 (174)
T cd06143 102 GCIFVGHGLAK 112 (174)
T ss_pred CCEEEeccchh
Confidence 57999999875
No 378
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=21.74 E-value=2.6e+02 Score=19.94 Aligned_cols=60 Identities=13% Similarity=0.049 Sum_probs=29.4
Q ss_pred HcCCCccEEEeccCCCccCc--cCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHH
Q 021479 63 HLGGNASISAIGSAAQTKKN--YDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEML 129 (312)
Q Consensus 63 ~l~~~~~vi~~D~~G~G~s~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a 129 (312)
.+.++.+++.+|.|--..-. .-++.... ....+.+.+..+ ..+.+++++..| | ..+...+
T Consensus 5 ~l~~~~~~~ivDvR~~~e~~~gHIpgAi~~---~~~~l~~~l~~l--~~~~~vVv~c~~-g-~~a~~aa 66 (145)
T cd01535 5 WLGEGGQTAVVDVTASANYVKRHIPGAWWV---LRAQLAQALEKL--PAAERYVLTCGS-S-LLARFAA 66 (145)
T ss_pred HHhCCCCeEEEECCCHHHHHcCCCCCceeC---CHHHHHHHHHhc--CCCCCEEEEeCC-C-hHHHHHH
Confidence 34346678899988632211 01222111 123334445554 344578888877 4 4444433
No 379
>PRK00131 aroK shikimate kinase; Reviewed
Probab=21.61 E-value=1.4e+02 Score=21.67 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=23.3
Q ss_pred eEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEecc
Q 021479 38 LHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGS 75 (312)
Q Consensus 38 ~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~ 75 (312)
+.+|++.|.+|+... .++..+++.+ ++.++-.|.
T Consensus 4 ~~~i~l~G~~GsGKs--tla~~La~~l--~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGKS--TIGRLLAKRL--GYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHHh--CCCEEEChH
Confidence 457889999888766 5555576665 466666553
No 380
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.60 E-value=47 Score=26.53 Aligned_cols=28 Identities=25% Similarity=0.286 Sum_probs=23.9
Q ss_pred EEEEeechHHHHHHHHHHhccccceEEE
Q 021479 113 IVLVGHSIGAYVALEMLKRSSEKVIYYI 140 (312)
Q Consensus 113 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 140 (312)
-.++|.|+|+.-+..|..+.+.+-++++
T Consensus 42 ~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 42 DLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred CeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 3478999999999999999998776666
No 381
>KOG1753 consensus 40S ribosomal protein S16 [Translation, ribosomal structure and biogenesis]
Probab=21.50 E-value=59 Score=22.48 Aligned_cols=20 Identities=20% Similarity=0.434 Sum_probs=12.9
Q ss_pred HhCCCCcee--ecCCCcccccc
Q 021479 267 EQVPDVPLA--IERHGHTHNFC 286 (312)
Q Consensus 267 ~~~~~~~~~--i~~~gH~~~~~ 286 (312)
+++.++++. +.++||...+.
T Consensus 60 ~rfa~vdi~v~~~ggghvsqiy 81 (145)
T KOG1753|consen 60 ERFAGVDIRVRVKGGGHVSQIY 81 (145)
T ss_pred hhhCCCceEEEEecCchHHHHH
Confidence 456666665 77888855443
No 382
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=21.41 E-value=2.2e+02 Score=26.64 Aligned_cols=82 Identities=10% Similarity=0.076 Sum_probs=46.7
Q ss_pred CCCceEEEEEcCCCCc----------hhcHHHHHHHHHHHcCCCccEEEeccC----CCccCccCCCCCcchHH----HH
Q 021479 34 DDPKLHVLFVPGNPGV----------ITFYKDFVQSLYEHLGGNASISAIGSA----AQTKKNYDHGRLFSLDE----QV 95 (312)
Q Consensus 34 ~~~~~~iv~~HG~~~~----------~~~~~~~~~~l~~~l~~~~~vi~~D~~----G~G~s~~~~~~~~~~~~----~~ 95 (312)
.+++.+||+.|..... .+.|+..+..|.+. ||+++.+|-- --|..-....-..|++| ..
T Consensus 45 ~~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~n---GY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny 121 (672)
T PRK14581 45 QKNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDN---GYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFY 121 (672)
T ss_pred CCCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHC---cCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchH
Confidence 3456789999987532 23466655554444 8999998732 11222111222334444 55
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeech
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSI 120 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~ 120 (312)
..+..+++++ +...-++++|.-.
T Consensus 122 ~~AlPILKky--g~pATfFvVg~wi 144 (672)
T PRK14581 122 RRVYPLLKAY--KWSAVLAPVGTWI 144 (672)
T ss_pred HHHHHHHHHc--CCCEEEEEechhh
Confidence 6677778887 5555567776433
No 383
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.24 E-value=3.4e+02 Score=20.65 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~ 132 (312)
.++.+.+.+...+.+ .++++++|..-.|.+|..++.+.
T Consensus 26 ~i~~a~~~l~~~l~~-~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 26 AISRAAMTLVQSLLN-GNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred HHHHHHHHHHHHHHc-CCEEEEEECcHHHHHHHHHHHHH
Confidence 344444444333332 34899999999999999999864
No 384
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.20 E-value=3.9e+02 Score=20.52 Aligned_cols=88 Identities=24% Similarity=0.313 Sum_probs=42.8
Q ss_pred CCceEEEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEeccCCCccC--------cc---CCCCCcchHHHHH--HHHHH
Q 021479 35 DPKLHVLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIGSAAQTKK--------NY---DHGRLFSLDEQVE--HKMDF 101 (312)
Q Consensus 35 ~~~~~iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D~~G~G~s--------~~---~~~~~~~~~~~~~--~~~~~ 101 (312)
+..+.|+|++=.+.....|........+.+. ++.+..++... ... +. ..+....+-.... .+.+.
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~-G~~~~~~~~~~-~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLR-GVEVSHLHLFD-TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhcc-CcEEEEEeccC-cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 3456799999777654443332333333332 56777666433 100 00 0111111111111 13334
Q ss_pred HHHHhhcCCCcEEEEeechHHHHHHH
Q 021479 102 IRQELQNTEVPIVLVGHSIGAYVALE 127 (312)
Q Consensus 102 i~~~~~~~~~~~~lvGhS~Gg~ia~~ 127 (312)
++... .+...++|.|.|+.+...
T Consensus 107 l~~~~---~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAAL---ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHH---HCCCEEEEECHhHHhhCC
Confidence 44431 224889999999988776
No 385
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=21.10 E-value=3e+02 Score=19.26 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhcc
Q 021479 96 EHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSS 133 (312)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p 133 (312)
+.+.+.+...+.+ +.+++++|..-.+.++.+++.+..
T Consensus 22 ~~aa~~i~~~~~~-gg~i~~~G~G~S~~~a~~~~~~~~ 58 (138)
T PF13580_consen 22 EKAADLIAEALRN-GGRIFVCGNGHSAAIASHFAADLG 58 (138)
T ss_dssp HHHHHHHHHHHHT-T--EEEEESTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCEEEEEcCchhhhHHHHHHHHHh
Confidence 3333444333333 448999999877888888887765
No 386
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=21.08 E-value=82 Score=19.40 Aligned_cols=29 Identities=17% Similarity=0.322 Sum_probs=17.0
Q ss_pred cEEEEeechHHHHHHHHHHhccccceEEEEec
Q 021479 112 PIVLVGHSIGAYVALEMLKRSSEKVIYYIGLY 143 (312)
Q Consensus 112 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 143 (312)
++.++| ||.+++++|......=..+.++.
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~ 29 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIE 29 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEe
Confidence 366777 55666666655544445666544
No 387
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=21.03 E-value=1.2e+02 Score=20.16 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=24.8
Q ss_pred CCceEEEEEcC-CCCchhcHHHHHHHHHHHcCC-CccEEEecc
Q 021479 35 DPKLHVLFVPG-NPGVITFYKDFVQSLYEHLGG-NASISAIGS 75 (312)
Q Consensus 35 ~~~~~iv~~HG-~~~~~~~~~~~~~~l~~~l~~-~~~vi~~D~ 75 (312)
.+++++|.++. +........+.+..+++.+.. ++.+..+|.
T Consensus 20 ~~k~vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~ 62 (109)
T cd02993 20 RNQSTLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNA 62 (109)
T ss_pred cCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEEC
Confidence 44666666664 444455556666667776653 467777764
No 388
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=20.84 E-value=71 Score=26.89 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=16.8
Q ss_pred EEEeechHHHHHHHHHHhc
Q 021479 114 VLVGHSIGAYVALEMLKRS 132 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~~~ 132 (312)
.+.|-|.||.+|+.++...
T Consensus 46 liaGTStGgiiA~~la~~~ 64 (349)
T cd07214 46 VIAGTSTGGLITAMLTAPN 64 (349)
T ss_pred EEeeCCHHHHHHHHHhcCC
Confidence 6899999999999999753
No 389
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=20.81 E-value=4.9e+02 Score=21.54 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=18.4
Q ss_pred EEEEcCCCCchhcHHHHHHHHHHHcCCCccEEEec
Q 021479 40 VLFVPGNPGVITFYKDFVQSLYEHLGGNASISAIG 74 (312)
Q Consensus 40 iv~~HG~~~~~~~~~~~~~~l~~~l~~~~~vi~~D 74 (312)
||+.||. +..-..|+..-.+.- ..|+|++.+
T Consensus 165 viLT~g~---SrTV~~FL~~A~kk~-Rkf~viVaE 195 (353)
T KOG1465|consen 165 VILTLGS---SRTVENFLKHAAKKG-RKFRVIVAE 195 (353)
T ss_pred eEEecCc---cHHHHHHHHHHHhcc-CceEEEEee
Confidence 8999993 333344444433332 369988765
No 390
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=20.73 E-value=5.6e+02 Score=22.20 Aligned_cols=48 Identities=10% Similarity=0.129 Sum_probs=26.7
Q ss_pred CccEEEeccCCC---ccCccCCCCCcchHHHHHHHHHHHHHHhhcCCCcEEEEee
Q 021479 67 NASISAIGSAAQ---TKKNYDHGRLFSLDEQVEHKMDFIRQELQNTEVPIVLVGH 118 (312)
Q Consensus 67 ~~~vi~~D~~G~---G~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvGh 118 (312)
|+.|+-++ +|+ |.. ..+...+.++.+..+...+... +-.+.++.+-|-
T Consensus 146 G~~ii~P~-~g~la~~~~--g~gr~~~~~~I~~~~~~~~~~~-~l~gk~vlITgG 196 (399)
T PRK05579 146 GVEIIGPA-SGRLACGDV--GPGRMAEPEEIVAAAERALSPK-DLAGKRVLITAG 196 (399)
T ss_pred CCEEECCC-CccccCCCc--CCCCCCCHHHHHHHHHHHhhhc-ccCCCEEEEeCC
Confidence 77777554 333 333 3445667777777777766432 012335666665
No 391
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=20.69 E-value=4.3e+02 Score=22.67 Aligned_cols=33 Identities=15% Similarity=0.322 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHhhcCCC-cEEEEeechHHHH
Q 021479 92 DEQVEHKMDFIRQELQNTEV-PIVLVGHSIGAYV 124 (312)
Q Consensus 92 ~~~~~~~~~~i~~~~~~~~~-~~~lvGhS~Gg~i 124 (312)
.+..+++.+.|+......+. .-+++=||+||..
T Consensus 79 ~~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGT 112 (379)
T cd02190 79 HQYIDSILEKIRKAAEKCDSLQSFFILHSLGGGT 112 (379)
T ss_pred hhHHHHHHHHHHHHHhhCcCcceEEEEeecCCCc
Confidence 34555555555554332221 2367778888643
No 392
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.44 E-value=78 Score=26.33 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=15.0
Q ss_pred EEEeechHHHHHHHHHH
Q 021479 114 VLVGHSIGAYVALEMLK 130 (312)
Q Consensus 114 ~lvGhS~Gg~ia~~~a~ 130 (312)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 68999999999998764
No 393
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=20.20 E-value=2.2e+02 Score=25.10 Aligned_cols=46 Identities=17% Similarity=0.325 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeechHHHHHHHHHHhccccceEEEEecc
Q 021479 94 QVEHKMDFIRQELQNTEVPIVLVGHSIGAYVALEMLKRSSEKVIYYIGLYP 144 (312)
Q Consensus 94 ~~~~~~~~i~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~p 144 (312)
.++|...++... ....+++.+| ||.+++++|+..-..-..+.++.|
T Consensus 199 eieda~~l~~~~--~~~~~vV~vG---~G~ig~Evaa~l~~~~~~VT~V~~ 244 (478)
T KOG1336|consen 199 EIEDANRLVAAI--QLGGKVVCVG---GGFIGMEVAAALVSKAKSVTVVFP 244 (478)
T ss_pred cHHHHHHHHHHh--ccCceEEEEC---chHHHHHHHHHHHhcCceEEEEcc
Confidence 445555555555 3333455555 788888888877766777777665
Done!