BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021482
MRPIRLPEPPTQTMGVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVL
YRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGL
SSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVH
LNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRS
AASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRT
PEKVLQQLLICH

High Scoring Gene Products

Symbol, full name Information P value
ELM1
ELONGATED MITOCHONDRIA 1
protein from Arabidopsis thaliana 4.1e-120
AT5G06180 protein from Arabidopsis thaliana 1.2e-85

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021482
        (312 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2176332 - symbol:ELM1 "ELONGATED MITOCHONDRIA ...  1182  4.1e-120  1
TAIR|locus:2160737 - symbol:AT5G06180 "AT5G06180" species...   662  1.2e-85   2


>TAIR|locus:2176332 [details] [associations]
            symbol:ELM1 "ELONGATED MITOCHONDRIA 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0000266 "mitochondrial fission" evidence=IMP] [GO:0005741
            "mitochondrial outer membrane" evidence=IDA] EMBL:CP002688
            GO:GO:0005741 GO:GO:0000266 ProtClustDB:CLSN2689497
            InterPro:IPR009367 Pfam:PF06258 EMBL:AY059915 EMBL:AY128808
            EMBL:AB379589 IPI:IPI00533715 RefSeq:NP_568417.1 UniGene:At.25246
            ProteinModelPortal:Q93YN4 STRING:Q93YN4 PRIDE:Q93YN4
            EnsemblPlants:AT5G22350.1 GeneID:832295 KEGG:ath:AT5G22350
            TAIR:At5g22350 HOGENOM:HOG000240785 InParanoid:Q93YN4 OMA:NTHQAIA
            PhylomeDB:Q93YN4 Genevestigator:Q93YN4 Uniprot:Q93YN4
        Length = 427

 Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
 Identities = 219/306 (71%), Positives = 262/306 (85%)

Query:     1 MRPIRLPEPPTQTMGVPEIFA-AGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHV 59
             MRPI LP+PP+ + GVP+IF   G+++V+RRAVVIGNG+PGSENQC+GLVRALGLSD H+
Sbjct:     1 MRPILLPDPPSLSTGVPDIFEQGGSHNVVRRAVVIGNGFPGSENQCIGLVRALGLSDNHL 60

Query:    60 LYRVTRPRGGINEWLHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCH-PLENGGNV 118
             LYRVTRP+GG+NEWLHWLPV  HKKL++++R I  YSRL+  ++  K +   P ENGGNV
Sbjct:    61 LYRVTRPKGGLNEWLHWLPVGFHKKLDFILRHIYLYSRLMLGSKQSKYISSVPSENGGNV 120

Query:   119 GLSSVLEADVRQIVTMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPR 178
             GL+S+LEADV+ IV +AR+TYEKDGPL+V+A GRDTISIASSI+RLAS+NVFVVQIQHPR
Sbjct:   121 GLASILEADVKGIVNLARQTYEKDGPLIVIACGRDTISIASSIRRLASENVFVVQIQHPR 180

Query:   179 VHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAAL 238
              HLNRFD+VITPRHDYYPLT E QE++P+F+R WITP EPP  HVVLTTGALHQID A+L
Sbjct:   181 SHLNRFDMVITPRHDYYPLTLEAQEQVPRFMRSWITPREPPQDHVVLTTGALHQIDYASL 240

Query:   239 RSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298
             R AASAWH+EFA LPKPLVVVN+G P   CRYG+DLAKQLT  LLNVL +CGS+RI+ S 
Sbjct:   241 RKAASAWHDEFAALPKPLVVVNIGWPRSNCRYGADLAKQLTDSLLNVLATCGSVRITLSY 300

Query:   299 RTPEKV 304
             +TP KV
Sbjct:   301 KTPAKV 306


>TAIR|locus:2160737 [details] [associations]
            symbol:AT5G06180 "AT5G06180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AY084218 EMBL:BT026438 EMBL:AK317011
            IPI:IPI00539757 RefSeq:NP_568162.1 RefSeq:NP_974738.1
            UniGene:At.28498 UniGene:At.66666 ProteinModelPortal:Q8LGK6
            EnsemblPlants:AT5G06180.1 EnsemblPlants:AT5G06180.2 GeneID:830505
            KEGG:ath:AT5G06180 TAIR:At5g06180 eggNOG:COG3660 InParanoid:Q8LGK6
            OMA:AGAENQC PhylomeDB:Q8LGK6 ProtClustDB:CLSN2689497
            Genevestigator:Q8LGK6 InterPro:IPR009367 Pfam:PF06258
            Uniprot:Q8LGK6
        Length = 404

 Score = 662 (238.1 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
 Identities = 137/234 (58%), Positives = 169/234 (72%)

Query:    74 LHWLPVSVHKKLEYVIRQICGYSRLLSAARGEKPVCHPLENGGNVGLSSVLEAD-VRQIV 132
             L WLP+S++K++   I  IC     LS             N    G+++V E D  +QI 
Sbjct:    69 LQWLPISLYKRIHRFISTICAG---LSI------------NA--TGITNVFEVDDAKQIA 111

Query:   133 TMARETYEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRH 192
              MAR+T+EK+GPLLVVASG DTIS+ASSI+RLA +NVFVVQ+QHPR HL RFDLVITP+H
Sbjct:   112 AMARKTFEKNGPLLVVASGSDTISVASSIRRLAMENVFVVQVQHPRSHLERFDLVITPQH 171

Query:   193 DYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFAPL 252
             DY+ LTPEG+ +IP FLR W+TP E P  +V LTTGALH  D++ LR+A S W  EFA L
Sbjct:   172 DYFSLTPEGKRQIPFFLRPWVTPREHPGRNVFLTTGALHYADASTLRNATSEWKNEFASL 231

Query:   253 PKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQ 306
             PKPLVVVN+GGPT  C YG DLAKQL   L ++L SCGS+RISFS RTP+KV++
Sbjct:   232 PKPLVVVNIGGPTRNCLYGVDLAKQLCGMLQSILWSCGSLRISFSRRTPKKVVE 285

 Score = 214 (80.4 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
 Identities = 39/79 (49%), Positives = 56/79 (70%)

Query:    15 GVPEIFAAGAYSVIRRAVVIGNGYPGSENQCVGLVRALGLSDKHVLYRVTRPRGGINEWL 74
             G+ E      +  ++RAV+IGNG  G+ENQC+GL+R+LGL D+H+ YRV +PRGGI   L
Sbjct:    13 GLSENLQGCVFRTVKRAVLIGNGCAGAENQCIGLLRSLGLFDRHLYYRVAKPRGGI---L 69

Query:    75 HWLPVSVHKKLEYVIRQIC 93
              WLP+S++K++   I  IC
Sbjct:    70 QWLPISLYKRIHRFISTIC 88


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      312       312   0.00080  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  227 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.35u 0.16s 24.51t   Elapsed:  00:00:01
  Total cpu time:  24.35u 0.16s 24.51t   Elapsed:  00:00:01
  Start:  Thu May  9 21:08:25 2013   End:  Thu May  9 21:08:26 2013

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