Query 021482
Match_columns 312
No_of_seqs 133 out of 211
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 04:47:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021482.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021482hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ybda1 c.73.1.3 (A:6-241) Uri 59.5 12 0.00085 29.9 7.2 46 252-297 2-51 (236)
2 d1ybha1 c.31.1.3 (A:281-459) A 51.6 7.4 0.00054 30.8 4.5 29 28-56 20-48 (179)
3 d2b8na1 c.118.1.1 (A:4-417) Pu 39.3 64 0.0046 29.2 9.5 104 143-282 35-145 (414)
4 d1f74a_ c.1.10.1 (A:) N-acetyl 38.8 28 0.0021 28.9 6.5 73 232-309 20-93 (293)
5 d2a1fa1 c.73.1.3 (A:2-237) Uri 37.9 40 0.0029 26.7 7.1 44 255-298 6-53 (236)
6 d1iowa1 c.30.1.2 (A:1-96) D-Al 37.4 10 0.00076 27.6 2.9 37 255-294 3-39 (96)
7 d1z9da1 c.73.1.3 (A:4-241) Uri 32.2 45 0.0033 25.8 6.4 47 255-301 5-55 (238)
8 d1zaia1 c.1.10.1 (A:1-363) Fru 29.2 36 0.0026 30.6 5.7 63 230-298 240-303 (363)
9 d1ehia1 c.30.1.2 (A:3-134) D-a 28.6 17 0.0013 27.5 3.0 31 254-284 1-31 (132)
10 d1o5ka_ c.1.10.1 (A:) Dihydrod 28.5 50 0.0036 27.2 6.3 71 233-309 19-90 (295)
11 d2a6na1 c.1.10.1 (A:1-292) Dih 27.6 74 0.0054 26.1 7.3 73 232-310 18-91 (292)
12 d1a5ca_ c.1.10.1 (A:) Fructose 27.1 28 0.0021 31.0 4.6 64 229-298 234-297 (342)
13 d1u7na_ c.77.1.4 (A:) Fatty ac 25.6 69 0.005 28.1 7.0 99 139-270 86-189 (329)
14 d1pn3a_ c.87.1.5 (A:) TDP-epi- 25.4 14 0.001 30.4 2.0 27 29-55 1-27 (391)
15 d1iira_ c.87.1.5 (A:) UDP-gluc 24.4 18 0.0013 29.6 2.5 26 29-54 1-26 (401)
16 d1jrla_ c.23.10.5 (A:) Thioest 22.7 95 0.0069 22.7 6.5 45 255-299 64-109 (179)
17 d2bz2a1 d.58.7.1 (A:35-113) Ne 22.3 71 0.0051 21.0 5.1 71 219-301 4-78 (79)
18 d1lcia_ e.23.1.1 (A:) Lucifera 21.6 56 0.0041 28.2 5.5 80 222-307 3-89 (541)
19 d1viaa_ c.37.1.2 (A:) Shikimat 20.6 87 0.0064 23.1 5.9 45 266-310 114-158 (161)
20 d1q2la1 d.185.1.1 (A:504-732) 20.6 83 0.006 23.9 5.9 56 226-292 172-228 (229)
21 d1rrva_ c.87.1.5 (A:) TDP-vanc 20.5 21 0.0015 29.5 2.1 27 29-55 1-27 (401)
22 d2fug61 e.19.1.2 (6:15-175) NA 20.4 34 0.0025 27.4 3.4 95 174-309 39-138 (161)
No 1
>d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]}
Probab=59.48 E-value=12 Score=29.89 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=37.9
Q ss_pred CCCCeEEEEEcCCC----CCcccCHHHHHHHHHHHHHHHHcCCeEEEEcC
Q 021482 252 LPKPLVVVNVGGPT----GCCRYGSDLAKQLTAHLLNVLVSCGSIRISFS 297 (312)
Q Consensus 252 lp~p~vaVLIGG~s----k~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtS 297 (312)
+...+|+|=|||.+ ..+.++.+...+++++|.++.+.|..+.|.+|
T Consensus 2 mk~krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVss 51 (236)
T d1ybda1 2 IKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVG 51 (236)
T ss_dssp CSCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 34478999999942 34558999999999999998888889999888
No 2
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=51.59 E-value=7.4 Score=30.75 Aligned_cols=29 Identities=17% Similarity=0.295 Sum_probs=24.9
Q ss_pred eeEEEEEcCCCccchhhHHHHHHHhCCCc
Q 021482 28 IRRAVVIGNGYPGSENQCVGLVRALGLSD 56 (312)
Q Consensus 28 ~~~~wVLsDG~aG~~nQ~~GLaeALg~~~ 56 (312)
-+.+.+++.|......+..-|||.+|.+.
T Consensus 20 krPvii~G~G~~~a~~~l~~lae~~~~Pv 48 (179)
T d1ybha1 20 KKPVLYVGGGCLNSSDELGRFVELTGIPV 48 (179)
T ss_dssp SSEEEEECGGGTTCHHHHHHHHHHHCCCE
T ss_pred CCeEEEECHHHHHHHHHHHHHHhhhcccc
Confidence 46688888888888899999999999864
No 3
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=39.26 E-value=64 Score=29.22 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=61.6
Q ss_pred CCcEEEEecCccHHHHHHHHHHhCCCceEEEEcCCCCCCCCccEEeeccCCCCCCCccccccchhhhhcccCCCCCCCCc
Q 021482 143 GPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGH 222 (312)
Q Consensus 143 ~PdLvIsaGr~T~~~~~~lrr~~gg~~~~V~i~~P~~~~~~FDlVi~P~HD~~~l~~~~~~~~p~~~~~~~~~~~~~~~N 222 (312)
..-+|||.|-.+...+..+.+..+.+... -+|++| |.... .+-++
T Consensus 35 ~~i~vvg~GKAa~~MA~~~~~~lg~~i~~-------------g~vv~~-~~~~~---------------------~~~~~ 79 (414)
T d2b8na1 35 DRVILVAVGKAAWRMAKAAYEVLGKKIRK-------------GVVVTK-YGHSE---------------------GPIDD 79 (414)
T ss_dssp CSEEEEEESTTHHHHHHHHHHHHGGGEEE-------------EEEEEE-TTCCC---------------------SCCTT
T ss_pred CCEEEEEEhHHHHHHHHHHHHHhCccCCc-------------eEEEeC-CCcCC---------------------CCCCC
Confidence 34678999999999999888887654211 234444 22110 02234
Q ss_pred EEEecCCCccCCHHHHHHHHhhchhhhCCCCCC-e-EEEEEcCCCC-----CcccCHHHHHHHHHHH
Q 021482 223 VVLTTGALHQIDSAALRSAASAWHEEFAPLPKP-L-VVVNVGGPTG-----CCRYGSDLAKQLTAHL 282 (312)
Q Consensus 223 Vl~t~Galh~vtp~~L~~a~~~~~~~la~lp~p-~-vaVLIGG~sk-----~~~~~~~~a~~L~~~l 282 (312)
+-+..+. |++-.+.=-.|+.+..+.+..++.. . ++++-||-|. .-.++-++-.++.+.|
T Consensus 80 i~v~~a~-HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~L 145 (414)
T d2b8na1 80 FEIYEAG-HPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSAL 145 (414)
T ss_dssp CEEEEEC-SSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHH
T ss_pred eEEEECC-CCCCCHHHHHHHHHHHHHHhcCCCCCeEEEEeeCCcccchhcCCCCCCHHHHHHHHHHH
Confidence 4444455 8887776666777766666665433 3 4555566543 3347777765555444
No 4
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=38.82 E-value=28 Score=28.95 Aligned_cols=73 Identities=11% Similarity=0.018 Sum_probs=50.2
Q ss_pred cCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCC-CCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHHHh
Q 021482 232 QIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPT-GCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLL 309 (312)
Q Consensus 232 ~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~s-k~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP~~~~~~L~ 309 (312)
.++.+.+++--+.+-+ . ...-+++++|.+ -.+.++.++-.++++...+.......+++.+|--+.+++.+..+
T Consensus 20 ~iD~~~l~~~i~~li~---~--~Gv~gi~v~GttGE~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~s~~~~iela~ 93 (293)
T d1f74a_ 20 TINEKGLRQIIRHNID---K--MKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGK 93 (293)
T ss_dssp CBCHHHHHHHHHHHHH---T--SCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH---h--CCCCEEEECccCcchhhCCHHHHhhhhheeeccccCccccccccccccHHHHHHHHH
Confidence 3677777654433211 1 134467777776 57889999988888887776655578999998888888776554
No 5
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]}
Probab=37.91 E-value=40 Score=26.70 Aligned_cols=44 Identities=2% Similarity=0.130 Sum_probs=35.7
Q ss_pred CeEEEEEcCCC----CCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 021482 255 PLVVVNVGGPT----GCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298 (312)
Q Consensus 255 p~vaVLIGG~s----k~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSR 298 (312)
+||++=|||.+ ..+.++.+....+++++.++.+.|..+.|.+|-
T Consensus 6 kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg 53 (236)
T d2a1fa1 6 KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGG 53 (236)
T ss_dssp SEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 57999999832 355588999999999999988778888887775
No 6
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=37.43 E-value=10 Score=27.58 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=27.1
Q ss_pred CeEEEEEcCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEE
Q 021482 255 PLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRI 294 (312)
Q Consensus 255 p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~l~~~~~sl~I 294 (312)
.+|+||-||.|.-+..+-.-++.+...|.+ .+..+..
T Consensus 3 ~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~---~~~~v~~ 39 (96)
T d1iowa1 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLRE---GGIDAYP 39 (96)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHH---TTCEEEE
T ss_pred ceEEEEeCcCchhhHhHHhhHHHHHHHHHH---cCeeEee
Confidence 479999999999988888877766666553 3444443
No 7
>d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]}
Probab=32.21 E-value=45 Score=25.82 Aligned_cols=47 Identities=11% Similarity=0.114 Sum_probs=36.6
Q ss_pred CeEEEEEcCC----CCCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 021482 255 PLVVVNVGGP----TGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTP 301 (312)
Q Consensus 255 p~vaVLIGG~----sk~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP 301 (312)
.+|+|=|||. ...+.++.+...+++++|.++.+.|..+.+..|-...
T Consensus 5 krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~ 55 (238)
T d1z9da1 5 QRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNL 55 (238)
T ss_dssp SEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred CEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 4788899994 2345588999999999999987778888777776543
No 8
>d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]}
Probab=29.18 E-value=36 Score=30.58 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=44.2
Q ss_pred CccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEEEcCC
Q 021482 230 LHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLV-SCGSIRISFSM 298 (312)
Q Consensus 230 lh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~l~~-~~~sl~ITtSR 298 (312)
...++++.+++.--....+--+-.-|.|+.|-|| +++++|......++++-. ..+.+.-|+||
T Consensus 240 ~~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGG------qS~eeAt~~LnamNk~~~~~pW~lsfSfgR 303 (363)
T d1zaia1 240 TQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGG------QSEEEASINLNAINKCPLLKPWALTFSYGR 303 (363)
T ss_dssp CSCCCHHHHHHHHHHHHHTTSCTTSCEEEECCTT------CCHHHHHHHHHHHHHCSSCCCSEEEEEESH
T ss_pred cccCChhHhhhhhhhhhhhcCCCCCCeeeecCCC------ccHHHHHHHHHHHhhccCCCCCeEEEEccH
Confidence 4567888888877666555556667899999999 567887766666665422 23567777776
No 9
>d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=28.61 E-value=17 Score=27.51 Aligned_cols=31 Identities=16% Similarity=0.141 Sum_probs=25.9
Q ss_pred CCeEEEEEcCCCCCcccCHHHHHHHHHHHHH
Q 021482 254 KPLVVVNVGGPTGCCRYGSDLAKQLTAHLLN 284 (312)
Q Consensus 254 ~p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~ 284 (312)
|.+|+||-||.|.-+.-+-.-|+.+.+.|.+
T Consensus 1 Kk~Iavl~GG~S~EheVSl~Sa~~v~~~L~~ 31 (132)
T d1ehia1 1 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEA 31 (132)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCcCcchhHHHHHHHHHHHHhhhc
Confidence 4689999999999998888888877777664
No 10
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=28.53 E-value=50 Score=27.15 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=46.9
Q ss_pred CCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCC-CcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHHHh
Q 021482 233 IDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTG-CCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLL 309 (312)
Q Consensus 233 vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk-~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP~~~~~~L~ 309 (312)
+|.+.+++--+.+-+ ...-.++++|.++ .+.++.++-+++++...+.......+++.+|--+-+++.+..+
T Consensus 19 iD~~~~~~~i~~l~~------~Gv~Gi~v~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~st~~ai~~a~ 90 (295)
T d1o5ka_ 19 LDLESYERLVRYQLE------NGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVK 90 (295)
T ss_dssp ECHHHHHHHHHHHHH------TTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH------cCCCEEEECeeccchhhCCHHHHHHHhhhhccccccCCceEeecccccHHHHHHHHH
Confidence 566666554433321 2345677777664 7778999988887776665544467888888877777666544
No 11
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=27.63 E-value=74 Score=26.13 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=51.6
Q ss_pred cCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCC-CcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHHHhh
Q 021482 232 QIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTG-CCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLI 310 (312)
Q Consensus 232 ~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk-~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP~~~~~~L~~ 310 (312)
.++.+.++.-.+.+.+ ...-.++++|.++ .+.++.++-.++++.+.+.......+.+.++--+.+++.+..+.
T Consensus 18 ~iD~~~~~~~i~~l~~------~Gv~Gl~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~g~~~~s~~~~i~~~~~ 91 (292)
T d2a6na1 18 NVCRASLKKLIDYHVA------SGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQR 91 (292)
T ss_dssp SBCHHHHHHHHHHHHH------HTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH------cCCCEEEECeeccchhhCCHHHHHHHhhhhhhhccccceeEeecccchHHHHHHHhcc
Confidence 3677777766544433 2344678888776 56689999888888777765445788999988888887776553
No 12
>d1a5ca_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Plasmodium falciparum [TaxId: 5833]}
Probab=27.09 E-value=28 Score=31.04 Aligned_cols=64 Identities=13% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCC
Q 021482 229 ALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSM 298 (312)
Q Consensus 229 alh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSR 298 (312)
.....+++.++++-...-.+--+-.-|.|++|-|| +++++|..-+..++++....+.+.-|+||
T Consensus 234 ~~~~~~~~~vA~~Tv~~l~~~vp~~VpgIvfLSGG------qS~eeAt~~LnaiNk~~~~pw~lsfSygR 297 (342)
T d1a5ca_ 234 CTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGG------QSEEEASVNLNSINALGPHPWALTFSYGR 297 (342)
T ss_dssp CCSCCCHHHHHHHHHHHHHTTCCTTSCEEEEBCTT------CCHHHHHHHHHHHHTSCCCSSEEEECCSH
T ss_pred ccccCCHHHHhhhHHHHHhhcCCCCCceeeecCCC------CCHHHHHHHHHHhhcCCCCCCeEEEechH
Confidence 35678888888776554444445567899999999 55788765555555432223455555555
No 13
>d1u7na_ c.77.1.4 (A:) Fatty acid/phospholipid synthesis protein PlsX {Enterococcus faecalis [TaxId: 1351]}
Probab=25.61 E-value=69 Score=28.08 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=56.6
Q ss_pred cCCCCCcEEEEecCccHHHHHHHHHHhCCCceEEEEcCCCCCCCCccEEeeccCCCCCCCccccccchhhhhcccCCCCC
Q 021482 139 YEKDGPLLVVASGRDTISIASSIKRLASDNVFVVQIQHPRVHLNRFDLVITPRHDYYPLTPEGQEKIPQFLRRWITPCEP 218 (312)
Q Consensus 139 ~~~p~PdLvIsaGr~T~~~~~~lrr~~gg~~~~V~i~~P~~~~~~FDlVi~P~HD~~~l~~~~~~~~p~~~~~~~~~~~~ 218 (312)
.....-|-+||||...+.++.+.-.. + +.. -|.+|.+ ..+.|...+ +
T Consensus 86 vk~g~ada~VSaGnTGAl~a~a~~~l-~-~i~--gv~RPai------a~~~Pt~~~-----------------------~ 132 (329)
T d1u7na_ 86 VKNGEADAIFSAGNTGALLAAGLFIV-G-RIK--NVERPGL------MSTLPVMGE-----------------------P 132 (329)
T ss_dssp HHHTSCSEEEESSCHHHHHHHHHHTT-C-BCT--TCSSCEE------EEEEECTTC-----------------------T
T ss_pred HHhhccceEeecCCCcceEeeeeehh-c-ccc--cccceee------eEeccccCC-----------------------C
Confidence 34467899999998766655444322 1 110 0223321 223332221 1
Q ss_pred CCCcEEEecCCCccCCHHHHHHHH---hhchhhhCCCCCCeEEEE-EcC-CCCCccc
Q 021482 219 PDGHVVLTTGALHQIDSAALRSAA---SAWHEEFAPLPKPLVVVN-VGG-PTGCCRY 270 (312)
Q Consensus 219 ~~~NVl~t~Galh~vtp~~L~~a~---~~~~~~la~lp~p~vaVL-IGG-~sk~~~~ 270 (312)
.+.-+++..|+=-..+|+.|.+=+ ..+.+..-....|+|++| ||- .+|.-.+
T Consensus 133 ~~~~~llD~GAN~~~~~~~L~qFA~mG~~ya~~v~~~~~P~VgLLNiG~E~~KG~~~ 189 (329)
T d1u7na_ 133 DKGFDMLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNGTEETKGSEL 189 (329)
T ss_dssp TCEEEEECSSSCSCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEECSCC----CCHH
T ss_pred CCceEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhCCCccceEeeecchhhhccccHH
Confidence 344578899999999998887643 355666667788998776 444 4455443
No 14
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=25.39 E-value=14 Score=30.42 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=24.0
Q ss_pred eEEEEEcCCCccchhhHHHHHHHhCCC
Q 021482 29 RRAVVIGNGYPGSENQCVGLVRALGLS 55 (312)
Q Consensus 29 ~~~wVLsDG~aG~~nQ~~GLaeALg~~ 55 (312)
+||++.+-|-.||.+-+++||++|...
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~r 27 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLREL 27 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHC
Confidence 478899999999999999999999654
No 15
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=24.40 E-value=18 Score=29.55 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=23.3
Q ss_pred eEEEEEcCCCccchhhHHHHHHHhCC
Q 021482 29 RRAVVIGNGYPGSENQCVGLVRALGL 54 (312)
Q Consensus 29 ~~~wVLsDG~aG~~nQ~~GLaeALg~ 54 (312)
+|+++.+=|-.||.+-+++||++|-.
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~ 26 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRD 26 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHH
Confidence 47889999999999999999999944
No 16
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=22.73 E-value=95 Score=22.74 Aligned_cols=45 Identities=16% Similarity=0.184 Sum_probs=29.6
Q ss_pred CeEEEEEcCCCCCcccCHHHHHHHHHHHHHHHH-cCCeEEEEcCCC
Q 021482 255 PLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLV-SCGSIRISFSMR 299 (312)
Q Consensus 255 p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~l~~-~~~sl~ITtSRR 299 (312)
..+.+.+|+++....++.+...+-..++.+.++ .+..+.+..-..
T Consensus 64 d~vii~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~~ 109 (179)
T d1jrla_ 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRP 109 (179)
T ss_dssp SEEEEECCTTTTTTTCCHHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred cEEEEEEeccccccccchhhhhhhHHHHHHHHHhccCcEEEEeccc
Confidence 577888888877667778776665555555444 667766654433
No 17
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.35 E-value=71 Score=21.05 Aligned_cols=71 Identities=20% Similarity=0.350 Sum_probs=39.8
Q ss_pred CCCcEEEecCCCccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCc---ccC-HHHHHHHHHHHHHHHHcCCeEEE
Q 021482 219 PDGHVVLTTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCC---RYG-SDLAKQLTAHLLNVLVSCGSIRI 294 (312)
Q Consensus 219 ~~~NVl~t~Galh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~---~~~-~~~a~~L~~~l~~l~~~~~sl~I 294 (312)
.+.+|++. .++ +|.+.|.+.-.. ++.... +-++ .++.| .|. .++|..-...++...-.|..+.|
T Consensus 4 ~~~ti~V~--~~~-~te~~L~~~F~~----~G~I~~----v~~~-~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V 71 (79)
T d2bz2a1 4 KGNTLYVY--GED-MTPTLLRGAFSP----FGNIID----LSMD-PPRNCAFVTYEKMESADQAVAELNGTQVESVQLKV 71 (79)
T ss_dssp CCCEEEEE--CSS-CCHHHHHHHHST----TCCCSC----EEEE-TTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEE
T ss_pred CCCEEEEE--CCC-CCHHHHHHHHhc----cCccce----eeec-cCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEE
Confidence 45556554 354 899988766433 343322 2222 33444 333 55554444444432225679999
Q ss_pred EcCCCCc
Q 021482 295 SFSMRTP 301 (312)
Q Consensus 295 TtSRRTP 301 (312)
..+|+.|
T Consensus 72 ~~a~~~P 78 (79)
T d2bz2a1 72 NIARKQP 78 (79)
T ss_dssp EECCSSC
T ss_pred EEecCCC
Confidence 9999987
No 18
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=21.60 E-value=56 Score=28.16 Aligned_cols=80 Identities=11% Similarity=0.153 Sum_probs=39.4
Q ss_pred cEEEecCCCccCCH----HHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCcccCH--HHHHHHHHHHHHH-HHcCCeEEE
Q 021482 222 HVVLTTGALHQIDS----AALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGS--DLAKQLTAHLLNV-LVSCGSIRI 294 (312)
Q Consensus 222 NVl~t~Galh~vtp----~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~~~~~--~~a~~L~~~l~~l-~~~~~sl~I 294 (312)
|+..-..+.+++.+ +.|+++.++| ++.| -.+++.=++......|.+ +.+.+++..|.++ ++.|..+ .
T Consensus 3 ~~~~~p~p~~p~~~~t~~~~l~~~~~~~----~~~P-~~~a~~d~~~~~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~V-a 76 (541)
T d1lcia_ 3 NIKKGPAPFYPLEDGTAGEQLHKAMKRY----ALVP-GTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRI-V 76 (541)
T ss_dssp TSEECCCCSSCCCSSCHHHHHHHHHHHH----HTST-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEE-E
T ss_pred CCCcCCCCCCCCCCCCHHHHHHHHHHhh----CCCC-CeEEEEeCCCCeEeeHHHHHHHHHHHHHHHHHcCcCCCCEE-E
Confidence 44444445555543 5566665554 3333 235555566666666654 3344444444432 1233344 4
Q ss_pred EcCCCCcHHHHHH
Q 021482 295 SFSMRTPEKVLQQ 307 (312)
Q Consensus 295 TtSRRTP~~~~~~ 307 (312)
..+..+++-+...
T Consensus 77 i~~~ns~e~~v~~ 89 (541)
T d1lcia_ 77 VCSENSLQFFMPV 89 (541)
T ss_dssp EECSSCSSTHHHH
T ss_pred EEeCCCHHHHHHH
Confidence 4556666655443
No 19
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=20.63 E-value=87 Score=23.11 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=31.3
Q ss_pred CCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHHHhh
Q 021482 266 GCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLLI 310 (312)
Q Consensus 266 k~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP~~~~~~L~~ 310 (312)
+..-.+.+...++..+-..+.+....+.|.||-.||+++.+.|.+
T Consensus 114 Rp~~~~~~~~~~l~~~r~~~Y~~~ad~~Idt~~~s~eei~~~I~~ 158 (161)
T d1viaa_ 114 RPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEIKK 158 (161)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHCSEEEECTTCCHHHHHHHHHH
T ss_pred cccccCchHHHHHHHHHHHHHHhhCCEEEECCCCCHHHHHHHHHH
Confidence 334456666666766554544445678899999999998887754
No 20
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]}
Probab=20.61 E-value=83 Score=23.87 Aligned_cols=56 Identities=14% Similarity=0.006 Sum_probs=38.2
Q ss_pred ecCCCccCCHHHHHHHHhhchhhhCCCCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHHHH-cCCeE
Q 021482 226 TTGALHQIDSAALRSAASAWHEEFAPLPKPLVVVNVGGPTGCCRYGSDLAKQLTAHLLNVLV-SCGSI 292 (312)
Q Consensus 226 t~Galh~vtp~~L~~a~~~~~~~la~lp~p~vaVLIGG~sk~~~~~~~~a~~L~~~l~~l~~-~~~sl 292 (312)
+.-.+..+|.+.+.+-...+- . ...+.++|-|+ ++.+++.++++.+.+.+. .|.+|
T Consensus 172 ~~~~l~~it~~dl~~f~~~~~----~--~~~~~~~i~Gn-----~~~~~a~~l~~~~~~~L~~~~~~~ 228 (229)
T d1q2la1 172 RRKILPSITLKEVLAYRDALK----S--GARPEFMVIGN-----MTEAQATTLARDVQKQLGADGSEW 228 (229)
T ss_dssp HHHHGGGCCHHHHHHHHHHHH----T--TCEEEEEEEES-----CCHHHHHHHHHHHHHHHTCCCSCC
T ss_pred hHHHHhhhhHHHHHHHHHHhc----C--ccCEEEEEEcC-----CCHHHHHHHHHHHHhhcCCCCCcC
Confidence 345678889888866443332 1 23555666665 899999999999999876 45444
No 21
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=20.47 E-value=21 Score=29.45 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=23.9
Q ss_pred eEEEEEcCCCccchhhHHHHHHHhCCC
Q 021482 29 RRAVVIGNGYPGSENQCVGLVRALGLS 55 (312)
Q Consensus 29 ~~~wVLsDG~aG~~nQ~~GLaeALg~~ 55 (312)
+||.+.+=|-.||.+.+++||++|--.
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~r 27 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKAL 27 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHC
Confidence 478899999999999999999999544
No 22
>d2fug61 e.19.1.2 (6:15-175) NAD-quinone oxidoreductase chain 6, Nqo6 {Thermus thermophilus [TaxId: 274]}
Probab=20.37 E-value=34 Score=27.37 Aligned_cols=95 Identities=20% Similarity=0.409 Sum_probs=49.6
Q ss_pred EcCCCCCCCCccE-Ee--eccCCCCCCCccccccchhhhhcccCCCCCCCCcEEEecCCCccCCHHHHHHHHhhchhhhC
Q 021482 174 IQHPRVHLNRFDL-VI--TPRHDYYPLTPEGQEKIPQFLRRWITPCEPPDGHVVLTTGALHQIDSAALRSAASAWHEEFA 250 (312)
Q Consensus 174 i~~P~~~~~~FDl-Vi--~P~HD~~~l~~~~~~~~p~~~~~~~~~~~~~~~NVl~t~Galh~vtp~~L~~a~~~~~~~la 250 (312)
+..|+.+.++|-. ++ .|+| .+|++..|.+..-....|..+ +.
T Consensus 39 ~~~p~yD~eRfG~~~~~~sPR~----------------------------ADvllVtG~vT~km~~~l~~~-------y~ 83 (161)
T d2fug61 39 STDARNDLARFGSEVFRASPRQ----------------------------ADVMIVAGRLSKKMAPVMRRV-------WE 83 (161)
T ss_dssp GCCC-----------------C----------------------------CCCEEEESCCBTTTHHHHHHH-------HH
T ss_pred ccCCccchhhhcccccCCCccc----------------------------CcEEEEeccchHHHHHHHHHH-------HH
Confidence 4468888888876 44 3444 556888899988777777544 35
Q ss_pred CCCCCeEEEEEcC--CCCCcccCHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHHHh
Q 021482 251 PLPKPLVVVNVGG--PTGCCRYGSDLAKQLTAHLLNVLVSCGSIRISFSMRTPEKVLQQLL 309 (312)
Q Consensus 251 ~lp~p~vaVLIGG--~sk~~~~~~~~a~~L~~~l~~l~~~~~sl~ITtSRRTP~~~~~~L~ 309 (312)
.+|.|+++|-+|- .++.+ |+.-. ....+.+++ -..++|-.-+=+|+++.+.|.
T Consensus 84 qmPePK~VIA~GaCa~sGG~-f~~y~---v~~gvd~~i--PVDvyIPGCPPrPeail~gl~ 138 (161)
T d2fug61 84 QMPDPKWVISMGACASSGGM-FNNYA---IVQNVDSVV--PVDVYVPGCPPRPEALIYAVM 138 (161)
T ss_dssp TSCSSCCEEEEHHHHHSCTT-CCSTT---BCSCGGGTS--CCSEEECCSSCCHHHHHHHHH
T ss_pred hCCCCceEEEecccccCCCc-cCCcc---ccCCcCccC--cCceeCCCCCcCHHHHHHHHH
Confidence 6889999999875 23332 32211 111222211 256888888888888776654
Done!