Citrus Sinensis ID: 021483

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MGLCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNISAA
ccccHHHHHHHHHHHHHHHcccccccccccccEEcccccccHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEcccccEEEEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEEEEEEEccccccccccccccEEEEccccccccccccccccccEEEEcccccccHHHHHcccccccccEEEEcccccccEEEEEccccccccEEEccccccccEEEEEEEEEEccEEEccccccccccccccEEEcc
ccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccEcEEEEEEcccccEEEEEEEcccccEEEEEccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccEEEEEEccccccccEEEEEEEEEcccccccccccccccEEEEccccccccccccccccccEEEEcccccccHHHHHHHccccccEEEEEEcccccccEEEEccccccccEEccccccccEEEEEEEEEEEccEEEcccHHHEEcccccEEEEcc
MGLCLRNCLCIVLIATAAvggvssnhgvfsvkyryagreRSLSLLKEHDARRQQRILAgvdlplggssrpdgvglyyakigigtppkdyyvqvdtgsdimwvnciqckecprrsslgieltlydikdsstgkfvtcdqefchgvyggpltdctantscpyleiygdgssttgyfVQDVVQYdkvsgdlqttstngslifgcgarqsgnldstneeALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLdgingggifaighvvqpevnktplvpnqphysinMTAVQVGLdflnlptdvfgvgdnkdnisaa
MGLCLRNCLCIVLIATaavggvssnhgvFSVKYRYAGRERSLSLLKEHDARRQQRIlagvdlplggssrPDGVGLYYAkigigtppKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPtdvfgvgdnkdnisaa
MGLCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNISAA
**LCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLK*******QRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR************LDGIIGFG***********SSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVG*********
****LRNCLCIVLIATAAVGGV************************************************DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG******TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKD*I***
MGLCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNISAA
MGLCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNISA*
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGLCLRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNISAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
Q9S9K4 475 Aspartic proteinase-like no no 0.935 0.614 0.447 1e-74
Q9LX20 528 Aspartic proteinase-like no no 0.663 0.392 0.333 5e-19
Q3EBM5 447 Probable aspartic proteas no no 0.714 0.498 0.312 1e-17
Q766C2 438 Aspartic proteinase nepen N/A no 0.782 0.557 0.272 2e-16
Q0IU52 410 Aspartic proteinase Asp1 no no 0.657 0.5 0.288 4e-14
Q766C3 437 Aspartic proteinase nepen N/A no 0.602 0.430 0.278 4e-13
Q9LS40 500 Protein ASPARTIC PROTEASE no no 0.451 0.282 0.329 1e-12
A2ZC67 410 Aspartic proteinase Asp1 N/A no 0.666 0.507 0.270 3e-12
Q9LHE3 470 Protein ASPARTIC PROTEASE no no 0.589 0.391 0.291 7e-12
Q6XBF8 437 Aspartic proteinase CDR1 no no 0.509 0.363 0.318 9e-09
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function desciption
 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/295 (44%), Positives = 199/295 (67%), Gaps = 3/295 (1%)

Query: 5   LRNCLCIVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPL 64
           LR  LCIV+     V   +S + VF  ++++AG++++L   K HD RR  R+LA +DLPL
Sbjct: 3   LRRKLCIVVAVFVIVIEFASANFVFKAQHKFAGKKKNLEHFKSHDTRRHSRMLASIDLPL 62

Query: 65  GGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYD 124
           GG SR D VGLY+ KI +G+PPK+Y+VQVDTGSDI+W+NC  C +CP +++L   L+L+D
Sbjct: 63  GGDSRVDSVGLYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPTKTNLNFRLSLFD 122

Query: 125 IKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKV 184
           +  SST K V CD +FC  +       C     C Y  +Y D S++ G F++D++  ++V
Sbjct: 123 MNASSTSKKVGCDDDFCSFISQS--DSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQV 180

Query: 185 SGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMF 244
           +GDL+T      ++FGCG+ QSG L    + A+DG++GFG+SN+S++SQLA++G  +++F
Sbjct: 181 TGDLKTGPLGQEVVFGCGSDQSGQL-GNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVF 239

Query: 245 AHCLDGINGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDV 299
           +HCLD + GGGIFA+G V  P+V  TP+VPNQ HY++ +  + V    L+LP  +
Sbjct: 240 SHCLDNVKGGGIFAVGVVDSPKVKTTPMVPNQMHYNVMLMGMDVDGTSLDLPRSI 294

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
255549236 492 Aspartic proteinase nepenthesin-1 precur 0.926 0.587 0.799 1e-134
224128838 485 predicted protein [Populus trichocarpa] 0.923 0.593 0.774 1e-129
297848856 484 aspartyl protease family protein [Arabid 0.974 0.628 0.726 1e-127
356523724 488 PREDICTED: aspartic proteinase-like prot 0.916 0.586 0.760 1e-126
359478045 502 PREDICTED: aspartic proteinase-like prot 0.916 0.569 0.75 1e-126
449446233 498 PREDICTED: aspartic proteinase-like prot 0.929 0.582 0.737 1e-126
296089645 477 unnamed protein product [Vitis vinifera] 0.916 0.599 0.75 1e-126
449518783 420 PREDICTED: aspartic proteinase-like prot 0.929 0.690 0.744 1e-125
18390579 485 aspartyl protease-like protein [Arabidop 0.974 0.626 0.719 1e-125
6850312388 Contains similarity to nucellin from Hor 0.974 0.783 0.719 1e-125
>gi|255549236|ref|XP_002515672.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223545215|gb|EEF46724.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/289 (79%), Positives = 259/289 (89%)

Query: 21  GVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKI 80
            VSS+ GVFSVKYRYAG++RSLS LK HD RRQ RILAGVDLPLGGS RPD VGLYYAK+
Sbjct: 31  AVSSDSGVFSVKYRYAGQQRSLSDLKAHDDRRQLRILAGVDLPLGGSGRPDTVGLYYAKV 90

Query: 81  GIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEF 140
           GIGTP KDYYVQVDTGSDIMWVNCIQC+ECPR SSLG+ELTLY+IKDS +GK V CD+EF
Sbjct: 91  GIGTPSKDYYVQVDTGSDIMWVNCIQCRECPRTSSLGMELTLYNIKDSVSGKLVPCDEEF 150

Query: 141 CHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFG 200
           C+ V GGPL+ CTAN SCPYLEIYGDGSST GYFV+DVVQYD+VSGDLQTTS+NGS+IFG
Sbjct: 151 CYEVNGGPLSGCTANMSCPYLEIYGDGSSTAGYFVKDVVQYDRVSGDLQTTSSNGSVIFG 210

Query: 201 CGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIG 260
           CGARQSG+L  T+EEALDGI+GFGKSNSSMISQLA++  V+K+FAHCLDGINGGGIFAIG
Sbjct: 211 CGARQSGDLGPTSEEALDGILGFGKSNSSMISQLAATRKVKKIFAHCLDGINGGGIFAIG 270

Query: 261 HVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNI 309
           HVVQP+VN TPL+PNQPHY++NMTAVQVG DFL+LPT+ F  GD K  I
Sbjct: 271 HVVQPKVNMTPLIPNQPHYNVNMTAVQVGEDFLHLPTEEFEAGDRKGAI 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128838|ref|XP_002320434.1| predicted protein [Populus trichocarpa] gi|222861207|gb|EEE98749.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297848856|ref|XP_002892309.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297338151|gb|EFH68568.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356523724|ref|XP_003530485.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] Back     alignment and taxonomy information
>gi|359478045|ref|XP_002267046.2| PREDICTED: aspartic proteinase-like protein 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449446233|ref|XP_004140876.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296089645|emb|CBI39464.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449518783|ref|XP_004166415.1| PREDICTED: aspartic proteinase-like protein 2-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|18390579|ref|NP_563751.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|332189782|gb|AEE27903.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|6850312|gb|AAF29389.1|AC009999_9 Contains similarity to nucellin from Hordeum vulgare gb|U87148. ESTs gb|T22068, gb|F14251, gb|F14237, gb|F14242 come from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
TAIR|locus:2198753 485 AT1G05840 [Arabidopsis thalian 0.955 0.614 0.732 4.7e-119
TAIR|locus:2075512 488 AT3G02740 [Arabidopsis thalian 0.913 0.584 0.524 5.8e-82
TAIR|locus:2183617 482 AT5G36260 [Arabidopsis thalian 0.932 0.603 0.488 6.3e-76
TAIR|locus:2200365 475 AT1G65240 [Arabidopsis thalian 0.935 0.614 0.447 2.5e-72
TAIR|locus:2172661 493 AT5G22850 [Arabidopsis thalian 0.871 0.551 0.419 8.4e-58
TAIR|locus:2040545 512 AT2G36670 [Arabidopsis thalian 0.855 0.521 0.397 5.5e-54
TAIR|locus:2200023 492 AT1G08210 [Arabidopsis thalian 0.846 0.536 0.390 3.5e-52
TAIR|locus:2206184 445 AT1G31450 [Arabidopsis thalian 0.75 0.525 0.343 2.8e-25
TAIR|locus:504955954 447 AT2G35615 [Arabidopsis thalian 0.714 0.498 0.328 1.9e-24
TAIR|locus:2827921 513 AT2G17760 [Arabidopsis thalian 0.721 0.438 0.323 8.1e-24
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 219/299 (73%), Positives = 253/299 (84%)

Query:    11 IVLIATAAVGGVSSNHGVFSVKYRYAGRERSLSLLKEHDARRQQRILAGVDLPLGGSSRP 70
             ++   TA V  VS N GVF+VKYRY   + SL+ LKEHD RRQ  ILAG+DLPLGG+ RP
Sbjct:    16 LIWFLTALVS-VSCNPGVFNVKYRYPRLQGSLTALKEHDDRRQLTILAGIDLPLGGTGRP 74

Query:    71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSST 130
             D  GLYYAKIGIGTP K YYVQVDTGSDIMWVNCIQCK+CPRRS+LGIELTLY+I +S +
Sbjct:    75 DIPGLYYAKIGIGTPAKSYYVQVDTGSDIMWVNCIQCKQCPRRSTLGIELTLYNIDESDS 134

Query:   131 GKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQT 190
             GK V+CD +FC+ + GGPL+ C AN SCPYLEIYGDGSST GYFV+DVVQYD V+GDL+T
Sbjct:   135 GKLVSCDDDFCYQISGGPLSGCKANMSCPYLEIYGDGSSTAGYFVKDVVQYDSVAGDLKT 194

Query:   191 TSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDG 250
              + NGS+IFGCGARQSG+LDS+NEEALDGI+GFGK+NSSMISQLASSG V+K+FAHCLDG
Sbjct:   195 QTANGSVIFGCGARQSGDLDSSNEEALDGILGFGKANSSMISQLASSGRVKKIFAHCLDG 254

Query:   251 INGGGIFAIGHVVQPEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKDNI 309
              NGGGIFAIG VVQP+VN TPLVPNQPHY++NMTAVQVG +FL +P D+F  GD K  I
Sbjct:   255 RNGGGIFAIGRVVQPKVNMTPLVPNQPHYNVNMTAVQVGQEFLTIPADLFQPGDRKGAI 313
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0000303 "response to superoxide" evidence=RCA
GO:0006301 "postreplication repair" evidence=RCA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0006869 "lipid transport" evidence=RCA
GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA
GO:0007165 "signal transduction" evidence=RCA
GO:0008219 "cell death" evidence=RCA
GO:0009755 "hormone-mediated signaling pathway" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0009873 "ethylene mediated signaling pathway" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
GO:0044265 "cellular macromolecule catabolic process" evidence=RCA
GO:0048573 "photoperiodism, flowering" evidence=RCA
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 5e-31
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 8e-28
PLN03146 431 PLN03146, PLN03146, aspartyl protease family prote 2e-27
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 4e-22
cd05472 299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-21
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 1e-16
pfam00026 316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-09
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 1e-08
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 2e-08
cd05490 325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 1e-07
cd05487326 cd05487, renin_like, Renin stimulates production o 8e-07
cd05489 362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 7e-06
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-05
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 2e-05
PTZ00165 482 PTZ00165, PTZ00165, aspartyl protease; Provisional 2e-05
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 1e-04
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 2e-04
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 2e-04
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 6e-04
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 0.002
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  116 bits (294), Expect = 5e-31
 Identities = 59/239 (24%), Positives = 85/239 (35%), Gaps = 75/239 (31%)

Query: 76  YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVT 135
           Y   + IGTPP+ + + VDTGSD+ W  C                               
Sbjct: 2   YLVTLSIGTPPQPFSLIVDTGSDLTWTQC------------------------------- 30

Query: 136 CDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNG 195
                                 C Y   YGDGSST+G    +            +     
Sbjct: 31  ----------------------CSYEYSYGDGSSTSGVLATETF---TFGDSSVSV---P 62

Query: 196 SLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI---N 252
           ++ FGCG    G          DGI+G G+   S++SQL S+G     F++CL       
Sbjct: 63  NVAFGCGTDNEGGSFGGA----DGILGLGRGPLSLVSQLGSTGNK---FSYCLVPHDDTG 115

Query: 253 GGGIFAIG---HVVQPEVNKTPLVPN---QPHYSINMTAVQVGLDFLNLPTDVFGVGDN 305
           G     +G    +    V  TPLV N     +Y +N+  + VG   L +P  VF +  +
Sbjct: 116 GSSPLILGDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSD 174

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
PLN03146 431 aspartyl protease family protein; Provisional 100.0
KOG1339 398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165 482 aspartyl protease; Provisional 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05490 325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05477 318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486 316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05485 329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05487 326 renin_like Renin stimulates production of angioten 100.0
PTZ00147 453 plasmepsin-1; Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00013 450 plasmepsin 4 (PM4); Provisional 100.0
cd05473 364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05472 299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489 362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
PF00026 317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.97
cd05474 295 SAP_like SAPs, pepsin-like proteinases secreted fr 99.97
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.9
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.9
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.85
PF1365090 Asp_protease_2: Aspartyl protease 95.59
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.3
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.23
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 90.63
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 87.12
COG3577215 Predicted aspartyl protease [General function pred 83.59
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-45  Score=351.91  Aligned_cols=287  Identities=28%  Similarity=0.470  Sum_probs=222.0

Q ss_pred             HHHHHHHHHHhhcccCcceeEEeeeecCCc------c----cCHHHHHHHHHHHHHHHhcc--cCcCCCCCCCCCCceeE
Q 021483            9 LCIVLIATAAVGGVSSNHGVFSVKYRYAGR------E----RSLSLLKEHDARRQQRILAG--VDLPLGGSSRPDGVGLY   76 (312)
Q Consensus         9 l~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~Y   76 (312)
                      |.++.+.+.+...+.....+++|.||+++.      .    ..+.+..+++.+|.+++...  ...|+. +.....+++|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Y   85 (431)
T PLN03146          7 LCLFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASPNDPQ-SDLISNGGEY   85 (431)
T ss_pred             HHHHHHhhhhhccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccccCCccc-cCcccCCccE
Confidence            344444455555666677899999988641      1    22344456666666665322  223333 1223457899


Q ss_pred             EEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCCCCCCC
Q 021483           77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANT  156 (312)
Q Consensus        77 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~C~~~~  156 (312)
                      +++|.||||+|++.|++||||+++||+|.+|..|..+.     ++.|||++|+||+.++|.+++|.....  ...|..++
T Consensus        86 ~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~-----~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~~~  158 (431)
T PLN03146         86 LMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQV-----SPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSDEN  158 (431)
T ss_pred             EEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCC-----CCcccCCCCCCCcccCCCCcccccCCC--CCCCCCCC
Confidence            99999999999999999999999999999999998653     379999999999999999999986543  23476667


Q ss_pred             CCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCCcHHHHHHh
Q 021483          157 SCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLAS  236 (312)
Q Consensus       157 ~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~  236 (312)
                      .|.|.+.|++|+.+.|.+++|+|+|++..+.   ...++++.|||+++..+.|.    ...+||||||+++.|+++||..
T Consensus       159 ~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~---~~~v~~~~FGc~~~~~g~f~----~~~~GilGLG~~~~Sl~sql~~  231 (431)
T PLN03146        159 TCTYSYSYGDGSFTKGNLAVETLTIGSTSGR---PVSFPGIVFGCGHNNGGTFD----EKGSGIVGLGGGPLSLISQLGS  231 (431)
T ss_pred             CCeeEEEeCCCCceeeEEEEEEEEeccCCCC---cceeCCEEEeCCCCCCCCcc----CCCceeEecCCCCccHHHHhhH
Confidence            7999999999998799999999999874322   12478999999998776553    2578999999999999999986


Q ss_pred             cCCCCCeeEEeecCC----CCcceEEeCCCCC---CCceeecCCCC--CCcEEEEEEEEEECCEEeccCCcccccCCCCC
Q 021483          237 SGGVRKMFAHCLDGI----NGGGIFAIGHVVQ---PEVNKTPLVPN--QPHYSINMTAVQVGLDFLNLPTDVFGVGDNKD  307 (312)
Q Consensus       237 ~g~i~~~Fs~~l~~~----~~~G~l~fGg~d~---~~~~~~pl~~~--~~~~~v~l~~i~vg~~~~~~~~~~~~~~~~~~  307 (312)
                      +  +.++|||||.+.    ...|.|+||+...   ..+.||||+.+  +.+|.|.|++|+||++++++++..|...+.++
T Consensus       232 ~--~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~  309 (431)
T PLN03146        232 S--IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGN  309 (431)
T ss_pred             h--hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCc
Confidence            3  556999999642    2479999999642   34899999743  46899999999999999999888876555688


Q ss_pred             eEEcC
Q 021483          308 NISAA  312 (312)
Q Consensus       308 ~iiDS  312 (312)
                      +||||
T Consensus       310 ~iiDS  314 (431)
T PLN03146        310 IIIDS  314 (431)
T ss_pred             EEEeC
Confidence            99997

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 4e-07
3oad_A166 Design And Optimization Of New Piperidines As Renin 3e-05
3d91_A341 Human Renin In Complex With Remikiren Length = 341 3e-05
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 3e-05
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 3e-05
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 3e-05
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 3e-05
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 3e-05
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 4e-05
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 1e-04
1lyw_A97 Cathepsin D At Ph 7.5 Length = 97 2e-04
1qdm_A 478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 3e-04
3vla_A 413 Crystal Structure Of Edgp Length = 413 4e-04
3vlb_A 413 Crystal Structure Of Xeg-Edgp Length = 413 4e-04
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 4e-04
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 4e-04
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 6e-04
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 6e-04
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 7e-04
1htr_B329 Crystal And Molecular Structures Of Human Progastri 8e-04
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure 
Iteration: 1

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 33/107 (30%)
Query: 76  YYAKIGIGTPPKDYYVQVDTGSDIMWV---NCIQCKECPRRSSLGIELTLYDIKDSSTGK 132
           Y+ +IGIGTPP+ + V  DTGS ++WV    CI  K C   S       +Y+  DSST K
Sbjct: 15  YFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHS-------MYESSDSSTYK 67
Query: 133 FVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVV 179
                    +G +G                IYG G S TG+F QD V
Sbjct: 68  --------ENGTFGAI--------------IYGTG-SITGFFSQDSV 91
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1LYW|A Chain A, Cathepsin D At Ph 7.5 Length = 97 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-45
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 1e-41
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 2e-39
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 2e-17
1oew_A 329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-16
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 1e-15
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-15
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 8e-15
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-14
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-14
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-14
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 7e-14
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 3e-13
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 5e-13
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 5e-13
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 6e-13
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-12
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 1e-12
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-12
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-12
2x0b_A 383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-12
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 4e-12
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 7e-12
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 9e-12
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 1e-11
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 2e-11
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-11
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-11
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 4e-11
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 9e-11
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 7e-10
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 6e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  158 bits (399), Expect = 2e-45
 Identities = 47/268 (17%), Positives = 80/268 (29%), Gaps = 31/268 (11%)

Query: 57  LAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSL 116
           +  V LP+         GL++A +   TP     V VD   + +WVNC Q        + 
Sbjct: 7   INLVVLPVQNDG---STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAP 63

Query: 117 GIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQ 176
                       S      C               C  NT            +  G   +
Sbjct: 64  -----FCHSTQCSRANTHQCLSCPA-----ASRPGCHKNTCGLMSTNPITQQTGLGELGE 113

Query: 177 DVVQYDKVSGDLQTTSTNGS---LIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQ 233
           DV+      G  Q      +    +F C                 G+ G G +  S+ +Q
Sbjct: 114 DVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL--PRNTQGVAGLGHAPISLPNQ 171

Query: 234 LASSGGVRKMFAHCLDGI-NGGGIFAIG-----------HVVQPEVNKTPLVPN-QPHYS 280
           LAS  G+++ F  CL       G    G             +  ++  TPL    Q  Y+
Sbjct: 172 LASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYN 231

Query: 281 INMTAVQVGLDFLNLPTDVFGVGDNKDN 308
           + + ++++    +     +        +
Sbjct: 232 VRVNSIRINQHSVFPLNKISSTIVGSTS 259
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A 370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A 383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1tzs_A 351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1mpp_A 361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1dpj_A 329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3c9x_A 329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1am5_A 324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1htr_B 329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1oew_A 329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1j71_A 334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3k1w_A 341 Renin; protease, alternative splicing, aspartyl pr 100.0
2qzx_A 342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3pvk_A 342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1miq_A 375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3fv3_A 339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3qvc_A 451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2bju_A 453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1yg9_A 330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3vf3_A 402 Beta-secretase 1; structure-based drug design, hyd 100.0
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1ibq_A 325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.89
1lya_B 241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.65
2hs1_A99 HIV-1 protease; ultra-high resolution active site 89.12
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 88.09
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 87.13
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 85.07
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 84.7
2hah_A116 Protease, retropepsin; retroviral, aspartyl, hydro 81.6
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=8.6e-41  Score=316.41  Aligned_cols=221  Identities=23%  Similarity=0.360  Sum_probs=181.0

Q ss_pred             CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021483           70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL  149 (312)
Q Consensus        70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~  149 (312)
                      +..+++|+++|.||||+|+|.|+|||||+++||+|..|                  .+|+||+.++|.++.|....+...
T Consensus        16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~   77 (413)
T 3vla_A           16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIAC   77 (413)
T ss_dssp             CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEE
T ss_pred             cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCC
Confidence            34689999999999999999999999999999998764                  378999999999999987765322


Q ss_pred             --------CCCCCCCCCccEEEe-CCCCceeEEEEEEEEEEecccCCcc-ccccccceEEEeEEeccCCCCCCCccccce
Q 021483          150 --------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNLDSTNEEALDG  219 (312)
Q Consensus       150 --------~~C~~~~~~~~~~~Y-~~g~~~~G~~~~D~l~~~~~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~~~~~~~G  219 (312)
                              ..|. ++.|.|.+.| ++++.+.|++++|+|+|+...+... ....++++.|||++...+..   ....+||
T Consensus        78 ~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g---~~~~~dG  153 (413)
T 3vla_A           78 GDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN---LASGVVG  153 (413)
T ss_dssp             ECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT---SCTTCCE
T ss_pred             cccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC---ccccccc
Confidence                    2343 4579999999 4777779999999999986443321 11347889999999763211   1246899


Q ss_pred             eeecCCCCCcHHHHHHhcCCCCCeeEEeecCC-CCcceEEeCCCCC---------CC-ceeecCCCCC------------
Q 021483          220 IIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ------------  276 (312)
Q Consensus       220 IlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~fGg~d~---------~~-~~~~pl~~~~------------  276 (312)
                      |||||++++|++.||+++++++++||+||.+. ..+|+|+||++|.         ++ ++||||+.++            
T Consensus       154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~  233 (413)
T 3vla_A          154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP  233 (413)
T ss_dssp             EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred             ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence            99999999999999999988889999999984 5679999999873         35 9999998653            


Q ss_pred             -CcEEEEEEEEEECCEEeccCCcccccC--CCCCeEEcC
Q 021483          277 -PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKDNISAA  312 (312)
Q Consensus       277 -~~~~v~l~~i~vg~~~~~~~~~~~~~~--~~~~~iiDS  312 (312)
                       .+|+|.|++|+||++.+.+++..|...  +++++||||
T Consensus       234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDS  272 (413)
T 3vla_A          234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKIST  272 (413)
T ss_dssp             CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECS
T ss_pred             CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEEC
Confidence             689999999999999999998888643  357899997
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 312
d1t6ex_ 381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 7e-26
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-19
d1eaga_ 342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 8e-18
d1oewa_ 330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-17
g1lya.1 338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 6e-17
d2qp8a1 387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 3e-16
d1mppa_ 357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-16
g1htr.1 372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-15
d1j71a_ 334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-15
d1qdma2 337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-15
d1miqa_ 373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 3e-15
d1dpja_ 329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 4e-15
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 6e-15
d2bjua1 329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-14
g1b5f.1 326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 8e-14
d3cmsa_ 323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-13
d1am5a_ 324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-13
d1hrna_ 337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 4e-13
d1smra_ 335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 7e-13
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 7e-13
d3psga_ 370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 1e-12
d1wkra_ 340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-10
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  103 bits (257), Expect = 7e-26
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 27/238 (11%)

Query: 74  GLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKF 133
            LY      G       + +D    ++W  C   +         I  +      ++    
Sbjct: 14  SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPA-----EIPCSSPTCLLANAYPA 63

Query: 134 VTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTST 193
             C    C        +D        Y      G+   G         +   G    +  
Sbjct: 64  PGCPAPSC-------GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKV 116

Query: 194 NGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGING 253
           N  ++  C   +             G+ G   S  ++ +Q+AS+  V   F  CL     
Sbjct: 117 NVGVLAACAPSKLLASLPRGS---TGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGP 173

Query: 254 GGIFAIGHVVQP-----EVNKTPLVPNQ--PHYSINMTAVQVGLDFLNLPTDVFGVGD 304
           G     G  V        +  TPLV     P + I+  ++ VG   + +P      G 
Sbjct: 174 GVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGG 231
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d3psga_ 370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1 372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_ 329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_ 330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_ 324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1j71a_ 334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_ 335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1mppa_ 357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_ 342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.98
d2qp8a1 387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.97
d1miqa_ 373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.97
d1hrna_ 337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.97
g1lya.1 338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.96
d1t6ex_ 381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.96
d1qdma2 337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.96
g1b5f.1 326 Plant acid proteinase, phytepsin {Cynara carduncul 99.96
d2bjua1 329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.96
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 99.96
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.95
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.95
d1wkra_ 340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.95
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 85.11
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 83.7
d3ecga199 Human immunodeficiency virus type 2 (HIV-2) protea 83.23
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 82.91
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.2e-36  Score=278.38  Aligned_cols=188  Identities=27%  Similarity=0.430  Sum_probs=160.0

Q ss_pred             CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021483           70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL  149 (312)
Q Consensus        70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~  149 (312)
                      ++.+.+|+++|.||||+|+|.|+|||||+++||+|..|..|..+     .++.|||++|+||+.                
T Consensus        52 n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~-----~~~~yd~~~Sst~~~----------------  110 (370)
T d3psga_          52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACS-----DHNQFNPDDSSTFEA----------------  110 (370)
T ss_dssp             GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGT-----TSCCBCGGGCTTCEE----------------
T ss_pred             cccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccc-----cccccCCCccccccc----------------
Confidence            66789999999999999999999999999999999999988654     348999999999997                


Q ss_pred             CCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC-
Q 021483          150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-  228 (312)
Q Consensus       150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-  228 (312)
                            ..|.|.+.|++|+. .|.++.|++.+++..        +.++.|||+....+.+..  ....+||+|||++.. 
T Consensus       111 ------~~~~~~~~Yg~Gs~-~G~~~~d~~~~~~~~--------~~~~~f~~~~~~~~~~~~--~~~~~Gi~gl~~~~~~  173 (370)
T d3psga_         111 ------TSQELSITYGTGSM-TGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFLY--YAPFDGILGLAYPSIS  173 (370)
T ss_dssp             ------EEEEEEEESSSCEE-EEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGGG--GCSCSEEEECSCGGGC
T ss_pred             ------CCCcEEEEeCCceE-EEEEEEEEEeeecee--------eeeeEEEEEeeccCceec--ccccccccccccCccc
Confidence                  45689999999985 899999999998753        678999999887654432  356799999998743 


Q ss_pred             -----cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEeccC
Q 021483          229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP  296 (312)
Q Consensus       229 -----s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~~  296 (312)
                           +++++|.++++| ++.|++|+.+. ..+|.|+||++|+    ++++|+|+. ...+|.|.++++.++++.+...
T Consensus       174 ~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~-~~~~w~v~~~~i~v~g~~~~~~  251 (370)
T d3psga_         174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIACS  251 (370)
T ss_dssp             GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEECT
T ss_pred             ccCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeec-ccceEEEEEeeEEeCCeEEecC
Confidence                 599999999999 89999999876 5678999999984    679999985 5679999999999999887654
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure