Query 021484
Match_columns 312
No_of_seqs 366 out of 2002
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 04:48:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 7E-38 2.4E-42 262.1 24.4 223 1-264 105-332 (344)
2 3ow8_A WD repeat-containing pr 100.0 2.9E-37 9.9E-42 256.3 24.8 248 1-293 60-319 (321)
3 1vyh_C Platelet-activating fac 100.0 1.3E-36 4.4E-41 260.8 24.7 246 1-293 132-409 (410)
4 2ynn_A Coatomer subunit beta'; 100.0 2.9E-36 1E-40 248.5 24.8 234 28-297 11-261 (304)
5 3ow8_A WD repeat-containing pr 100.0 4.4E-36 1.5E-40 249.2 22.7 214 1-261 104-319 (321)
6 1vyh_C Platelet-activating fac 100.0 9.2E-36 3.1E-40 255.5 24.8 235 27-297 105-371 (410)
7 4g56_B MGC81050 protein; prote 100.0 2.9E-36 9.8E-41 253.9 21.1 223 1-264 117-344 (357)
8 1got_B GT-beta; complex (GTP-b 100.0 2E-35 7E-40 247.2 25.3 221 1-264 79-302 (340)
9 3frx_A Guanine nucleotide-bind 100.0 7.1E-35 2.4E-39 241.8 24.6 250 1-295 42-317 (319)
10 4ery_A WD repeat-containing pr 100.0 1.6E-34 5.5E-39 238.8 26.4 236 27-297 20-270 (312)
11 2ynn_A Coatomer subunit beta'; 100.0 8.9E-35 3E-39 239.6 24.2 219 1-265 37-261 (304)
12 4gqb_B Methylosome protein 50; 100.0 2.5E-35 8.5E-40 246.6 20.8 236 29-297 81-333 (344)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-34 4.9E-39 242.5 24.6 238 28-296 13-284 (345)
14 2hes_X YDR267CP; beta-propelle 100.0 2.5E-34 8.6E-39 239.6 25.0 262 1-295 36-328 (330)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 6E-34 2.1E-38 238.8 27.3 259 1-298 40-338 (345)
16 2pbi_B Guanine nucleotide-bind 100.0 4.5E-34 1.5E-38 240.3 25.8 251 1-291 88-353 (354)
17 3iz6_a 40S ribosomal protein R 100.0 9.2E-35 3.1E-39 246.9 21.8 252 27-296 63-376 (380)
18 1got_B GT-beta; complex (GTP-b 100.0 5E-34 1.7E-38 238.8 25.4 238 27-297 52-303 (340)
19 2xzm_R RACK1; ribosome, transl 100.0 1.8E-33 6.1E-38 235.7 25.6 230 28-296 74-341 (343)
20 4g56_B MGC81050 protein; prote 100.0 2.6E-34 8.9E-39 242.0 19.8 237 28-297 92-345 (357)
21 1nr0_A Actin interacting prote 100.0 2.5E-33 8.7E-38 252.1 27.1 217 1-264 41-271 (611)
22 2pbi_B Guanine nucleotide-bind 100.0 3.7E-33 1.3E-37 234.7 26.0 241 27-297 61-317 (354)
23 4ery_A WD repeat-containing pr 100.0 5.1E-33 1.8E-37 229.8 26.3 219 1-265 47-270 (312)
24 2pm7_B Protein transport prote 100.0 5.9E-33 2E-37 228.0 26.0 236 27-294 6-284 (297)
25 2pm7_B Protein transport prote 100.0 1.5E-32 5.2E-37 225.5 26.6 223 1-264 33-286 (297)
26 2hes_X YDR267CP; beta-propelle 100.0 9.2E-33 3.1E-37 230.2 24.6 240 28-296 12-281 (330)
27 1nr0_A Actin interacting prote 100.0 5.3E-33 1.8E-37 250.0 24.8 273 1-297 172-569 (611)
28 1erj_A Transcriptional repress 100.0 6.6E-33 2.2E-37 236.5 24.1 228 30-294 123-388 (393)
29 3frx_A Guanine nucleotide-bind 100.0 5.8E-33 2E-37 230.3 22.9 236 27-294 14-266 (319)
30 1erj_A Transcriptional repress 100.0 1.3E-32 4.3E-37 234.8 23.5 217 1-264 147-390 (393)
31 1gxr_A ESG1, transducin-like e 100.0 6.6E-32 2.2E-36 224.9 26.5 252 1-293 74-335 (337)
32 2xzm_R RACK1; ribosome, transl 100.0 4.9E-32 1.7E-36 227.0 25.7 239 28-297 19-287 (343)
33 3iz6_a 40S ribosomal protein R 100.0 2.6E-32 8.8E-37 231.8 24.2 210 27-265 154-377 (380)
34 3bg1_A Protein SEC13 homolog; 100.0 3.7E-33 1.3E-37 231.2 17.9 236 27-294 10-292 (316)
35 3vl1_A 26S proteasome regulato 100.0 1.9E-32 6.6E-37 235.4 22.6 219 1-264 121-366 (420)
36 4e54_B DNA damage-binding prot 100.0 3.1E-32 1.1E-36 235.4 23.5 204 28-264 117-328 (435)
37 3bg1_A Protein SEC13 homolog; 100.0 1.2E-32 4.3E-37 228.0 19.4 224 1-264 37-294 (316)
38 3dm0_A Maltose-binding peripla 100.0 4.5E-32 1.5E-36 247.6 24.0 250 1-294 407-692 (694)
39 4aow_A Guanine nucleotide-bind 100.0 6.8E-32 2.3E-36 225.3 21.3 255 27-297 35-339 (340)
40 3vl1_A 26S proteasome regulato 100.0 1E-31 3.5E-36 230.8 22.7 229 32-296 99-366 (420)
41 3k26_A Polycomb protein EED; W 100.0 4.8E-32 1.6E-36 228.3 18.9 250 1-293 46-364 (366)
42 4aez_A CDC20, WD repeat-contai 100.0 7.7E-31 2.6E-35 224.3 25.9 252 1-299 115-384 (401)
43 3ei3_B DNA damage-binding prot 100.0 6.9E-31 2.4E-35 223.2 25.1 234 28-297 71-341 (383)
44 2ymu_A WD-40 repeat protein; u 100.0 1.8E-31 6.2E-36 238.5 22.5 194 28-260 383-577 (577)
45 4e54_B DNA damage-binding prot 100.0 2.6E-31 8.9E-36 229.6 22.6 252 1-296 144-431 (435)
46 2ymu_A WD-40 repeat protein; u 100.0 3.9E-31 1.3E-35 236.3 24.4 196 28-262 342-538 (577)
47 2pm9_A Protein WEB1, protein t 100.0 1E-30 3.5E-35 224.2 25.5 267 1-299 47-341 (416)
48 4h5i_A Guanine nucleotide-exch 100.0 4.6E-31 1.6E-35 222.8 23.0 199 29-264 132-344 (365)
49 3jrp_A Fusion protein of prote 100.0 5E-31 1.7E-35 223.1 23.2 234 28-295 9-287 (379)
50 3i2n_A WD repeat-containing pr 100.0 4.7E-31 1.6E-35 221.6 22.8 255 1-296 46-354 (357)
51 3ei3_B DNA damage-binding prot 100.0 9.4E-31 3.2E-35 222.3 24.8 248 1-295 98-382 (383)
52 2j04_B YDR362CP, TAU91; beta p 100.0 2.7E-31 9.2E-36 233.1 21.8 261 1-295 237-517 (524)
53 1r5m_A SIR4-interacting protei 100.0 7E-31 2.4E-35 225.4 23.6 216 28-265 106-363 (425)
54 1gxr_A ESG1, transducin-like e 100.0 1.1E-30 3.7E-35 217.6 23.7 240 28-297 49-298 (337)
55 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-30 3.7E-35 223.5 24.0 238 27-295 78-342 (402)
56 3dm0_A Maltose-binding peripla 100.0 4.6E-31 1.6E-35 240.9 23.0 239 28-297 380-634 (694)
57 3dwl_C Actin-related protein 2 100.0 1.5E-31 5.1E-36 226.7 18.4 221 1-262 35-280 (377)
58 2pm9_A Protein WEB1, protein t 100.0 1.9E-31 6.6E-36 228.7 18.7 214 28-265 111-339 (416)
59 3v7d_B Cell division control p 100.0 2.1E-30 7.2E-35 225.7 24.6 261 1-298 144-424 (464)
60 3dwl_C Actin-related protein 2 100.0 9.2E-32 3.1E-36 228.0 15.4 233 29-294 10-280 (377)
61 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-30 5.7E-35 219.5 22.9 219 1-263 32-274 (372)
62 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-31 8.8E-36 233.2 18.1 232 1-263 185-428 (524)
63 1sq9_A Antiviral protein SKI8; 100.0 3E-30 1E-34 220.0 23.7 224 1-264 38-323 (397)
64 4a11_B DNA excision repair pro 100.0 8.5E-30 2.9E-34 217.7 25.8 228 2-264 26-277 (408)
65 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-30 5.9E-35 219.5 21.3 241 1-266 76-364 (372)
66 3zwl_B Eukaryotic translation 100.0 8.4E-30 2.9E-34 214.7 25.4 262 1-297 56-348 (369)
67 3f3f_A Nucleoporin SEH1; struc 100.0 7.2E-30 2.5E-34 213.1 23.8 248 27-297 8-339 (351)
68 3dw8_B Serine/threonine-protei 100.0 7.7E-30 2.6E-34 220.8 24.2 217 31-266 94-376 (447)
69 3k26_A Polycomb protein EED; W 100.0 2.5E-30 8.4E-35 217.8 20.5 238 28-297 16-320 (366)
70 3f3f_A Nucleoporin SEH1; struc 100.0 6.3E-30 2.2E-34 213.5 22.4 233 1-267 35-341 (351)
71 3jrp_A Fusion protein of prote 100.0 1.1E-29 3.8E-34 214.9 24.1 224 1-265 35-289 (379)
72 3dw8_B Serine/threonine-protei 100.0 6.2E-30 2.1E-34 221.4 22.9 259 29-297 27-375 (447)
73 3gre_A Serine/threonine-protei 100.0 4.4E-30 1.5E-34 221.9 21.9 240 28-298 61-362 (437)
74 3mkq_A Coatomer beta'-subunit; 100.0 7.1E-30 2.4E-34 236.9 23.8 235 28-297 11-261 (814)
75 4gga_A P55CDC, cell division c 100.0 1.6E-29 5.4E-34 217.5 23.6 251 1-297 127-397 (420)
76 4aow_A Guanine nucleotide-bind 100.0 3.2E-29 1.1E-33 209.1 24.8 235 1-264 63-338 (340)
77 1sq9_A Antiviral protein SKI8; 100.0 6E-30 2.1E-34 218.1 19.9 203 30-264 121-396 (397)
78 3i2n_A WD repeat-containing pr 100.0 4.6E-30 1.6E-34 215.5 18.5 239 28-299 16-295 (357)
79 3lrv_A PRE-mRNA-splicing facto 100.0 2.1E-29 7.2E-34 211.0 22.4 223 1-264 60-293 (343)
80 1r5m_A SIR4-interacting protei 100.0 2.4E-29 8.2E-34 215.9 22.2 214 28-262 147-424 (425)
81 2xyi_A Probable histone-bindin 100.0 2.3E-29 8E-34 217.1 21.6 251 28-296 126-411 (430)
82 3zwl_B Eukaryotic translation 100.0 5.1E-29 1.8E-33 209.9 22.9 202 27-265 29-251 (369)
83 2xyi_A Probable histone-bindin 100.0 6.4E-29 2.2E-33 214.3 23.5 212 28-264 179-411 (430)
84 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-28 4.2E-33 212.9 24.7 243 1-300 155-419 (435)
85 4ggc_A P55CDC, cell division c 100.0 2.6E-28 8.8E-33 201.7 25.3 237 1-264 47-316 (318)
86 3jro_A Fusion protein of prote 100.0 2.4E-29 8.1E-34 231.2 20.5 236 27-296 6-286 (753)
87 3jro_A Fusion protein of prote 100.0 1.4E-28 4.7E-33 226.2 25.1 223 1-264 33-286 (753)
88 1pgu_A Actin interacting prote 100.0 5.7E-29 1.9E-33 223.7 22.0 253 1-295 41-328 (615)
89 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-28 4E-33 238.4 25.0 250 1-297 639-994 (1249)
90 3gre_A Serine/threonine-protei 100.0 5.3E-29 1.8E-33 215.2 20.1 214 29-267 110-363 (437)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.9E-28 9.9E-33 211.5 24.6 203 27-261 99-337 (450)
92 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-28 9.7E-33 208.5 24.2 243 32-297 36-301 (402)
93 4h5i_A Guanine nucleotide-exch 100.0 1.1E-28 3.7E-33 208.2 21.2 180 1-222 159-344 (365)
94 4a11_B DNA excision repair pro 100.0 6E-28 2E-32 206.2 25.7 262 1-297 68-367 (408)
95 3sfz_A APAF-1, apoptotic pepti 100.0 4.1E-29 1.4E-33 241.5 20.6 244 1-294 985-1248(1249)
96 4aez_A CDC20, WD repeat-contai 100.0 1.8E-28 6.1E-33 209.7 22.0 217 1-266 158-383 (401)
97 3odt_A Protein DOA1; ubiquitin 100.0 4.4E-28 1.5E-32 199.8 23.3 248 1-300 41-301 (313)
98 3v7d_B Cell division control p 100.0 4E-28 1.4E-32 211.3 23.5 229 1-266 185-424 (464)
99 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-28 4.6E-33 228.3 21.7 218 1-264 37-260 (814)
100 1yfq_A Cell cycle arrest prote 100.0 9.6E-29 3.3E-33 206.5 17.4 232 28-297 9-284 (342)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-27 4.2E-32 207.2 24.4 240 1-297 141-393 (445)
102 4gq1_A NUP37; propeller, trans 100.0 1.5E-28 5.1E-33 209.5 18.1 237 1-263 113-389 (393)
103 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-27 5.1E-32 206.7 24.3 238 1-295 181-442 (445)
104 2w18_A PALB2, fancn, partner a 100.0 5.4E-28 1.9E-32 196.5 20.0 210 30-261 111-355 (356)
105 3odt_A Protein DOA1; ubiquitin 100.0 2E-27 6.8E-32 195.8 23.3 229 28-297 16-257 (313)
106 1yfq_A Cell cycle arrest prote 100.0 9.3E-28 3.2E-32 200.5 19.4 217 1-265 35-284 (342)
107 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-28 5.1E-33 212.1 14.8 189 29-262 84-296 (588)
108 2j04_A TAU60, YPL007P, hypothe 100.0 1E-27 3.6E-32 206.8 20.0 208 30-266 15-257 (588)
109 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-28 2.7E-32 207.8 19.5 212 1-266 195-417 (435)
110 3mmy_A MRNA export factor; mRN 100.0 4.1E-27 1.4E-31 198.1 21.9 206 27-265 36-306 (368)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-27 9.6E-32 205.3 20.8 215 30-265 4-273 (450)
112 3vu4_A KMHSV2; beta-propeller 100.0 2.8E-26 9.4E-31 192.9 26.2 213 32-265 60-338 (355)
113 2oaj_A Protein SNI1; WD40 repe 100.0 5.2E-28 1.8E-32 225.6 17.2 198 28-265 15-244 (902)
114 4gq1_A NUP37; propeller, trans 100.0 1.3E-27 4.3E-32 203.8 17.8 221 36-286 95-381 (393)
115 3mmy_A MRNA export factor; mRN 100.0 3.5E-27 1.2E-31 198.6 19.5 234 1-262 66-345 (368)
116 4gga_A P55CDC, cell division c 100.0 4.8E-26 1.6E-30 195.8 25.0 220 1-265 171-397 (420)
117 1pgu_A Actin interacting prote 99.9 7.8E-27 2.7E-31 209.7 20.1 238 28-297 16-285 (615)
118 3lrv_A PRE-mRNA-splicing facto 99.9 2E-26 6.8E-31 192.9 21.2 194 29-261 124-331 (343)
119 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-26 3.7E-31 195.4 19.7 209 28-264 17-272 (355)
120 2w18_A PALB2, fancn, partner a 99.9 7.2E-27 2.5E-31 189.9 17.1 156 28-219 176-355 (356)
121 4ggc_A P55CDC, cell division c 99.9 3.3E-26 1.1E-30 189.0 20.5 244 33-296 28-316 (318)
122 1l0q_A Surface layer protein; 99.9 1.9E-25 6.3E-30 190.1 24.8 247 1-297 14-277 (391)
123 2oaj_A Protein SNI1; WD40 repe 99.9 4.2E-27 1.4E-31 219.5 14.7 184 27-219 432-659 (902)
124 3bws_A Protein LP49; two-domai 99.9 1.2E-24 4E-29 187.6 20.5 250 1-294 146-431 (433)
125 1l0q_A Surface layer protein; 99.9 1E-23 3.5E-28 179.4 25.0 213 1-264 56-276 (391)
126 3bws_A Protein LP49; two-domai 99.9 1.6E-23 5.6E-28 180.4 20.8 202 31-264 123-335 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.5E-23 2.9E-27 175.1 24.8 196 29-264 177-388 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3E-23 1E-27 177.9 19.9 264 1-312 95-406 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 2.1E-22 7.1E-27 173.4 16.5 223 30-264 36-279 (434)
130 2ojh_A Uncharacterized protein 99.9 1.3E-20 4.4E-25 153.5 23.5 215 1-266 24-261 (297)
131 2oit_A Nucleoporin 214KDA; NH2 99.9 6.5E-21 2.2E-25 164.1 21.8 169 29-222 91-279 (434)
132 3vgz_A Uncharacterized protein 99.9 5.2E-20 1.8E-24 154.1 24.2 255 1-295 71-335 (353)
133 3u4y_A Uncharacterized protein 99.9 8.6E-20 2.9E-24 151.6 22.1 249 1-297 22-306 (331)
134 1ri6_A Putative isomerase YBHE 99.8 2.1E-19 7.3E-24 149.6 21.6 202 29-262 36-261 (343)
135 1nir_A Nitrite reductase; hemo 99.8 3.5E-19 1.2E-23 157.4 23.9 249 1-299 161-462 (543)
136 2ecf_A Dipeptidyl peptidase IV 99.8 2.1E-19 7E-24 165.2 19.1 213 30-265 36-323 (741)
137 1pby_B Quinohemoprotein amine 99.8 4.7E-19 1.6E-23 147.1 19.4 221 1-267 13-314 (337)
138 2ecf_A Dipeptidyl peptidase IV 99.8 9.3E-20 3.2E-24 167.5 16.3 195 32-262 110-366 (741)
139 1xfd_A DIP, dipeptidyl aminope 99.8 1.6E-19 5.4E-24 165.5 16.1 221 1-260 39-341 (723)
140 2z3z_A Dipeptidyl aminopeptida 99.8 2.1E-19 7.1E-24 164.3 16.8 196 31-262 82-341 (706)
141 1nir_A Nitrite reductase; hemo 99.8 1.3E-18 4.5E-23 153.7 19.2 229 1-266 250-517 (543)
142 2ojh_A Uncharacterized protein 99.8 9E-19 3.1E-23 142.5 16.5 206 1-253 64-292 (297)
143 1jmx_B Amine dehydrogenase; ox 99.8 2.4E-18 8.3E-23 143.6 19.1 217 1-265 23-327 (349)
144 2z3z_A Dipeptidyl aminopeptida 99.8 1.1E-18 3.7E-23 159.6 16.0 263 1-296 103-436 (706)
145 1xfd_A DIP, dipeptidyl aminope 99.8 1E-18 3.5E-23 160.1 14.5 195 32-264 18-290 (723)
146 3vgz_A Uncharacterized protein 99.8 9.3E-18 3.2E-22 140.3 19.1 233 30-296 40-304 (353)
147 3u4y_A Uncharacterized protein 99.8 4.2E-17 1.4E-21 135.3 22.0 225 36-297 3-254 (331)
148 3hfq_A Uncharacterized protein 99.8 5E-17 1.7E-21 135.9 21.3 206 30-263 39-271 (347)
149 1z68_A Fibroblast activation p 99.8 1.3E-18 4.4E-23 159.4 11.9 230 1-263 38-346 (719)
150 1ri6_A Putative isomerase YBHE 99.8 2.6E-17 8.8E-22 137.0 18.3 198 32-263 85-308 (343)
151 1k32_A Tricorn protease; prote 99.8 4.6E-18 1.6E-22 161.7 14.6 193 29-261 294-500 (1045)
152 3o4h_A Acylamino-acid-releasin 99.8 3.5E-17 1.2E-21 146.4 18.3 189 31-261 65-274 (582)
153 3hfq_A Uncharacterized protein 99.7 3.8E-16 1.3E-20 130.5 21.5 227 1-263 65-317 (347)
154 1k32_A Tricorn protease; prote 99.7 2.1E-16 7.2E-21 150.4 22.2 154 29-220 335-501 (1045)
155 1jmx_B Amine dehydrogenase; ox 99.7 7.9E-17 2.7E-21 134.4 16.7 153 35-223 4-177 (349)
156 4a5s_A Dipeptidyl peptidase 4 99.7 2.1E-16 7.3E-21 145.1 19.8 233 1-264 38-354 (740)
157 1pby_B Quinohemoprotein amine 99.7 4E-16 1.4E-20 129.4 19.1 146 44-223 2-165 (337)
158 3o4h_A Acylamino-acid-releasin 99.7 1.4E-16 4.6E-21 142.5 14.8 194 30-265 21-229 (582)
159 3scy_A Hypothetical bacterial 99.7 3.5E-14 1.2E-18 119.2 27.1 201 31-262 50-290 (361)
160 3scy_A Hypothetical bacterial 99.7 6.9E-15 2.3E-19 123.5 22.0 214 30-263 99-337 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.2E-15 7.5E-20 126.9 18.9 202 33-264 85-342 (365)
162 4a5s_A Dipeptidyl peptidase 4 99.7 1.7E-15 5.7E-20 139.2 18.5 194 32-265 18-296 (740)
163 3pe7_A Oligogalacturonate lyas 99.7 9.7E-15 3.3E-19 123.7 21.3 227 36-297 41-331 (388)
164 1z68_A Fibroblast activation p 99.7 2.4E-16 8.1E-21 144.4 11.4 203 32-263 111-391 (719)
165 1q7f_A NHL, brain tumor CG1071 99.7 3.3E-14 1.1E-18 115.4 22.1 199 29-263 75-280 (286)
166 3pe7_A Oligogalacturonate lyas 99.7 3.2E-15 1.1E-19 126.6 15.7 199 29-264 79-330 (388)
167 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.7E-14 5.9E-19 121.4 19.4 199 31-262 40-290 (365)
168 3azo_A Aminopeptidase; POP fam 99.6 1.8E-14 6E-19 130.8 20.0 191 35-262 81-322 (662)
169 3fvz_A Peptidyl-glycine alpha- 99.6 7.9E-14 2.7E-18 115.6 21.4 201 30-265 23-279 (329)
170 1q7f_A NHL, brain tumor CG1071 99.6 2.2E-13 7.7E-18 110.4 22.7 204 27-262 26-237 (286)
171 3fvz_A Peptidyl-glycine alpha- 99.6 8.4E-14 2.9E-18 115.5 18.9 206 30-264 90-323 (329)
172 3azo_A Aminopeptidase; POP fam 99.6 3.4E-14 1.2E-18 128.9 17.2 199 29-262 128-366 (662)
173 1rwi_B Serine/threonine-protei 99.5 1.1E-12 3.7E-17 105.4 19.9 197 31-264 67-265 (270)
174 2xdw_A Prolyl endopeptidase; a 99.5 1.1E-12 3.8E-17 119.9 21.9 234 29-297 123-416 (710)
175 3c5m_A Oligogalacturonate lyas 99.5 4.9E-14 1.7E-18 119.5 11.8 191 35-265 85-331 (396)
176 3c5m_A Oligogalacturonate lyas 99.5 4.3E-14 1.5E-18 119.9 11.0 198 31-264 36-274 (396)
177 2dg1_A DRP35, lactonase; beta 99.5 3.4E-12 1.2E-16 105.8 22.2 198 29-262 43-262 (333)
178 2gop_A Trilobed protease; beta 99.5 3.4E-13 1.2E-17 112.4 16.2 180 32-262 60-290 (347)
179 1rwi_B Serine/threonine-protei 99.5 1E-12 3.4E-17 105.6 18.1 197 32-264 25-223 (270)
180 3e5z_A Putative gluconolactona 99.5 1.4E-12 4.7E-17 106.4 18.9 189 29-254 67-278 (296)
181 2bkl_A Prolyl endopeptidase; m 99.5 9E-13 3.1E-17 120.2 19.3 199 28-262 118-348 (695)
182 3dsm_A Uncharacterized protein 99.5 7.8E-12 2.7E-16 103.5 21.9 216 1-262 66-301 (328)
183 1xip_A Nucleoporin NUP159; bet 99.5 9.6E-13 3.3E-17 110.1 16.1 184 31-252 38-233 (388)
184 3e5z_A Putative gluconolactona 99.5 3.6E-12 1.2E-16 103.9 18.6 194 30-262 27-245 (296)
185 2oiz_A Aromatic amine dehydrog 99.5 2.7E-12 9.1E-17 107.8 16.0 66 153-222 259-335 (361)
186 2dg1_A DRP35, lactonase; beta 99.5 5.3E-11 1.8E-15 98.6 23.7 160 29-223 85-265 (333)
187 3no2_A Uncharacterized protein 99.4 5.7E-12 2E-16 101.6 16.0 183 44-264 6-196 (276)
188 2xdw_A Prolyl endopeptidase; a 99.4 2.6E-11 8.9E-16 110.9 20.2 221 1-265 153-416 (710)
189 2gop_A Trilobed protease; beta 99.4 8.1E-12 2.8E-16 104.0 14.6 180 33-262 106-330 (347)
190 3no2_A Uncharacterized protein 99.4 6.7E-11 2.3E-15 95.3 19.3 176 1-224 17-198 (276)
191 2z2n_A Virginiamycin B lyase; 99.4 3E-10 1E-14 92.3 22.7 195 29-261 13-211 (299)
192 1yr2_A Prolyl oligopeptidase; 99.4 1.7E-11 6E-16 112.5 16.9 197 29-262 161-392 (741)
193 1xip_A Nucleoporin NUP159; bet 99.4 1.5E-11 5.3E-16 102.8 15.0 134 29-208 87-231 (388)
194 1qks_A Cytochrome CD1 nitrite 99.4 8.8E-10 3E-14 97.5 26.1 213 1-263 179-421 (567)
195 2bkl_A Prolyl endopeptidase; m 99.3 5.3E-11 1.8E-15 108.6 17.7 198 34-265 171-399 (695)
196 3hrp_A Uncharacterized protein 99.3 1.9E-10 6.4E-15 98.1 19.9 196 31-264 131-355 (409)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 6.9E-10 2.4E-14 90.9 21.8 199 29-263 69-299 (314)
198 2z2n_A Virginiamycin B lyase; 99.3 2.1E-09 7.1E-14 87.2 23.8 194 30-261 56-253 (299)
199 3dsm_A Uncharacterized protein 99.3 2.7E-10 9.3E-15 94.2 17.2 223 31-292 44-285 (328)
200 2oiz_A Aromatic amine dehydrog 99.2 2.9E-09 1E-13 89.2 22.5 176 51-264 29-231 (361)
201 2qc5_A Streptogramin B lactona 99.2 5.4E-09 1.8E-13 84.8 22.9 194 30-261 19-216 (300)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.1E-09 3.7E-14 89.7 18.4 200 32-264 19-257 (314)
203 3g4e_A Regucalcin; six bladed 99.2 4.5E-09 1.6E-13 85.6 20.2 226 32-296 14-264 (297)
204 3hrp_A Uncharacterized protein 99.2 1.9E-09 6.6E-14 91.8 18.2 157 36-224 176-357 (409)
205 2qc5_A Streptogramin B lactona 99.2 1.7E-08 5.9E-13 81.8 23.1 194 30-261 61-258 (300)
206 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-09 4.4E-14 96.4 17.3 187 40-265 165-375 (567)
207 2ghs_A AGR_C_1268P; regucalcin 99.2 6E-09 2E-13 86.0 20.3 189 33-261 51-258 (326)
208 3g4e_A Regucalcin; six bladed 99.1 1.2E-08 4.1E-13 83.0 20.6 162 30-224 53-232 (297)
209 3sjl_D Methylamine dehydrogena 99.1 1.9E-08 6.4E-13 84.0 21.7 190 36-264 38-257 (386)
210 1yr2_A Prolyl oligopeptidase; 99.1 2.3E-09 7.9E-14 98.5 17.8 219 1-264 191-442 (741)
211 2ghs_A AGR_C_1268P; regucalcin 99.1 3.1E-08 1.1E-12 81.7 20.4 155 31-222 90-261 (326)
212 3iuj_A Prolyl endopeptidase; h 99.1 1.6E-09 5.3E-14 98.8 13.7 198 28-262 126-358 (693)
213 2hz6_A Endoplasmic reticulum t 99.1 7.7E-11 2.6E-15 99.1 3.9 180 44-265 10-194 (369)
214 3dr2_A Exported gluconolactona 99.0 2.3E-08 7.8E-13 81.7 18.5 153 32-222 46-225 (305)
215 3iuj_A Prolyl endopeptidase; h 99.0 1.2E-08 4.2E-13 92.9 18.2 217 1-264 157-406 (693)
216 2mad_H Methylamine dehydrogena 99.0 4.5E-07 1.5E-11 76.2 23.8 230 35-297 70-352 (373)
217 3sjl_D Methylamine dehydrogena 99.0 4.2E-08 1.5E-12 81.8 17.2 157 35-223 82-258 (386)
218 2qe8_A Uncharacterized protein 98.9 5.1E-09 1.7E-13 87.1 10.5 182 29-223 65-280 (343)
219 2mad_H Methylamine dehydrogena 98.9 7.7E-07 2.6E-11 74.7 23.6 146 37-223 27-197 (373)
220 3dr2_A Exported gluconolactona 98.9 1.4E-07 4.7E-12 77.0 17.3 187 30-254 85-298 (305)
221 2ece_A 462AA long hypothetical 98.9 1.4E-06 4.9E-11 73.5 22.9 158 33-220 140-351 (462)
222 2ece_A 462AA long hypothetical 98.9 9.6E-07 3.3E-11 74.5 21.7 202 40-264 93-353 (462)
223 2iwa_A Glutamine cyclotransfer 98.9 3.9E-07 1.3E-11 72.1 18.3 195 32-264 22-238 (266)
224 3c75_H MADH, methylamine dehyd 98.9 2.8E-07 9.6E-12 78.2 18.6 174 53-264 99-296 (426)
225 2qe8_A Uncharacterized protein 98.8 3.8E-07 1.3E-11 75.8 17.5 201 2-218 96-318 (343)
226 1npe_A Nidogen, entactin; glyc 98.8 3.6E-06 1.2E-10 67.1 22.3 196 32-264 37-239 (267)
227 3c75_H MADH, methylamine dehyd 98.8 1.4E-07 4.7E-12 80.1 14.2 252 2-297 102-404 (426)
228 2hz6_A Endoplasmic reticulum t 98.7 1.1E-08 3.7E-13 86.0 3.7 140 100-266 9-152 (369)
229 1mda_H Methylamine dehydrogena 98.7 4.9E-07 1.7E-11 75.4 13.6 70 153-224 269-349 (368)
230 3nol_A Glutamine cyclotransfer 98.6 6E-06 2.1E-10 64.6 18.1 152 32-224 44-204 (262)
231 1fwx_A Nitrous oxide reductase 98.6 4.4E-06 1.5E-10 73.0 18.6 188 2-221 115-361 (595)
232 2iwa_A Glutamine cyclotransfer 98.6 3.1E-06 1E-10 67.0 15.9 152 35-223 70-239 (266)
233 1npe_A Nidogen, entactin; glyc 98.6 1.8E-05 6E-10 63.1 20.1 157 89-264 36-199 (267)
234 3nok_A Glutaminyl cyclase; bet 98.6 7.5E-06 2.6E-10 64.1 16.9 153 32-224 56-213 (268)
235 3nol_A Glutamine cyclotransfer 98.5 4.1E-06 1.4E-10 65.6 15.0 161 1-209 67-243 (262)
236 2xe4_A Oligopeptidase B; hydro 98.5 1.3E-05 4.6E-10 73.6 18.8 193 32-261 175-396 (751)
237 1ijq_A LDL receptor, low-densi 98.5 0.0002 6.7E-09 58.6 24.0 196 32-261 31-236 (316)
238 3mbr_X Glutamine cyclotransfer 98.5 6.6E-05 2.3E-09 58.2 19.7 154 31-224 21-182 (243)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.4 1.9E-05 6.6E-10 66.2 18.0 224 44-297 54-298 (376)
240 1yiq_A Quinohemoprotein alcoho 98.4 7.6E-06 2.6E-10 74.4 15.7 196 52-266 182-508 (689)
241 3nok_A Glutaminyl cyclase; bet 98.4 1.4E-05 4.7E-10 62.7 15.0 158 1-209 77-253 (268)
242 2fp8_A Strictosidine synthase; 98.4 8E-05 2.7E-09 61.0 20.4 170 32-222 20-217 (322)
243 3hxj_A Pyrrolo-quinoline quino 98.4 8.5E-06 2.9E-10 66.8 14.4 174 45-261 109-282 (330)
244 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00012 4.2E-09 61.2 21.7 187 44-266 144-340 (376)
245 1kb0_A Quinohemoprotein alcoho 98.4 6.2E-06 2.1E-10 74.8 14.5 54 170-224 457-510 (677)
246 3mbr_X Glutamine cyclotransfer 98.4 4.2E-05 1.4E-09 59.3 16.7 132 42-209 74-222 (243)
247 3qqz_A Putative uncharacterize 98.4 0.00018 6E-09 56.5 20.2 164 30-222 26-205 (255)
248 1fwx_A Nitrous oxide reductase 98.4 3.2E-05 1.1E-09 67.6 17.3 187 40-263 99-361 (595)
249 1kb0_A Quinohemoprotein alcoho 98.4 1E-05 3.4E-10 73.4 14.9 197 52-267 189-511 (677)
250 1mda_H Methylamine dehydrogena 98.3 1.4E-05 4.9E-10 66.6 14.4 102 44-179 33-158 (368)
251 3v64_C Agrin; beta propeller, 98.3 0.00038 1.3E-08 57.8 23.0 191 32-260 74-272 (349)
252 2fp8_A Strictosidine synthase; 98.3 8.7E-05 3E-09 60.8 18.9 198 32-264 81-314 (322)
253 3v65_B Low-density lipoprotein 98.3 0.00024 8.2E-09 59.8 21.9 192 32-260 117-315 (386)
254 3p5b_L Low density lipoprotein 98.3 0.00035 1.2E-08 59.1 22.7 198 31-260 112-317 (400)
255 3sov_A LRP-6, low-density lipo 98.3 0.00022 7.7E-09 58.3 20.8 197 32-264 36-239 (318)
256 3hxj_A Pyrrolo-quinoline quino 98.3 1.9E-05 6.5E-10 64.7 14.1 144 32-222 61-204 (330)
257 1yiq_A Quinohemoprotein alcoho 98.2 4E-05 1.4E-09 69.7 16.2 55 169-224 454-508 (689)
258 2p4o_A Hypothetical protein; p 98.2 0.00046 1.6E-08 56.0 20.7 225 31-294 32-278 (306)
259 3v64_C Agrin; beta propeller, 98.2 0.00082 2.8E-08 55.7 22.0 196 31-264 34-235 (349)
260 1k3i_A Galactose oxidase precu 98.2 0.00014 4.9E-09 65.8 18.4 202 33-264 245-498 (656)
261 3m0c_C LDL receptor, low-densi 98.1 0.0015 5.2E-08 60.0 24.0 198 31-261 424-630 (791)
262 2p9w_A MAL S 1 allergenic prot 98.0 0.00061 2.1E-08 55.2 16.7 161 33-221 15-215 (334)
263 3s94_A LRP-6, low-density lipo 98.0 0.0044 1.5E-07 55.5 24.1 196 32-263 41-243 (619)
264 1n7d_A LDL receptor, low-densi 98.0 3E-05 1E-09 70.5 10.2 199 32-262 407-613 (699)
265 4a2l_A BT_4663, two-component 98.0 0.0016 5.3E-08 60.4 21.9 163 30-224 309-483 (795)
266 1ijq_A LDL receptor, low-densi 98.0 0.0026 8.8E-08 51.9 20.7 180 53-264 10-196 (316)
267 3v65_B Low-density lipoprotein 98.0 0.0019 6.4E-08 54.4 20.1 193 33-264 79-278 (386)
268 3tc9_A Hypothetical hydrolase; 98.0 0.0009 3.1E-08 57.2 18.3 154 32-221 138-301 (430)
269 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0054 1.8E-07 55.0 23.1 193 32-262 38-236 (628)
270 3p5b_L Low density lipoprotein 97.9 0.0048 1.6E-07 52.1 21.7 182 51-264 90-278 (400)
271 2ad6_A Methanol dehydrogenase 97.9 0.0011 3.9E-08 58.7 18.1 107 158-266 311-497 (571)
272 4a2l_A BT_4663, two-component 97.9 0.0067 2.3E-07 56.1 23.4 165 30-224 262-439 (795)
273 2xe4_A Oligopeptidase B; hydro 97.8 0.00052 1.8E-08 63.1 15.5 112 90-222 175-305 (751)
274 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0098 3.4E-07 53.3 22.2 180 51-264 13-198 (628)
275 4hw6_A Hypothetical protein, I 97.8 0.002 6.9E-08 55.0 16.9 153 32-220 140-303 (433)
276 3v9f_A Two-component system se 97.7 0.0095 3.3E-07 55.0 22.1 160 30-226 406-573 (781)
277 3kya_A Putative phosphatase; s 97.7 0.0047 1.6E-07 53.3 18.4 163 32-220 140-340 (496)
278 1n7d_A LDL receptor, low-densi 97.7 0.00051 1.7E-08 62.5 13.0 160 90-264 407-572 (699)
279 1kv9_A Type II quinohemoprotei 97.7 0.001 3.5E-08 60.2 14.9 56 168-224 436-491 (668)
280 3sov_A LRP-6, low-density lipo 97.7 0.016 5.3E-07 47.3 21.7 156 32-223 80-240 (318)
281 1k3i_A Galactose oxidase precu 97.7 0.0015 5.3E-08 59.0 15.6 102 151-252 402-530 (656)
282 1flg_A Protein (quinoprotein e 97.6 0.003 1E-07 56.2 16.3 135 158-295 331-549 (582)
283 1w6s_A Methanol dehydrogenase 97.6 0.0075 2.6E-07 53.7 18.8 135 158-295 318-536 (599)
284 4hw6_A Hypothetical protein, I 97.6 0.0046 1.6E-07 52.8 16.7 114 90-220 229-373 (433)
285 3v9f_A Two-component system se 97.6 0.0054 1.9E-07 56.6 18.4 159 31-224 363-527 (781)
286 2p4o_A Hypothetical protein; p 97.5 0.025 8.5E-07 45.7 19.0 148 34-210 120-277 (306)
287 3m0c_C LDL receptor, low-densi 97.5 0.021 7.3E-07 52.5 20.3 161 88-264 423-590 (791)
288 2xbg_A YCF48-like protein; pho 97.4 0.019 6.4E-07 47.0 17.4 152 29-219 161-320 (327)
289 1flg_A Protein (quinoprotein e 97.4 0.0095 3.2E-07 52.9 16.5 55 169-224 465-519 (582)
290 1tl2_A L10, protein (tachylect 97.3 0.027 9.2E-07 42.8 15.8 154 32-214 42-203 (236)
291 1kv9_A Type II quinohemoprotei 97.3 0.0075 2.6E-07 54.6 15.3 153 44-224 118-336 (668)
292 2ad6_A Methanol dehydrogenase 97.3 0.0081 2.8E-07 53.3 14.8 56 168-224 442-497 (571)
293 3tc9_A Hypothetical hydrolase; 97.2 0.0044 1.5E-07 52.9 12.3 152 90-263 138-301 (430)
294 3qqz_A Putative uncharacterize 97.2 0.058 2E-06 42.2 20.8 166 32-219 71-251 (255)
295 3pbp_A Nucleoporin NUP82; beta 97.1 0.041 1.4E-06 46.2 16.4 109 95-221 27-158 (452)
296 3s94_A LRP-6, low-density lipo 97.1 0.065 2.2E-06 48.0 19.1 156 88-263 39-202 (619)
297 3kya_A Putative phosphatase; s 97.1 0.089 3E-06 45.4 18.9 123 91-220 249-409 (496)
298 1w6s_A Methanol dehydrogenase 97.1 0.022 7.4E-07 50.8 15.4 56 168-224 451-506 (599)
299 3amr_A 3-phytase; beta-propell 97.0 0.09 3.1E-06 43.0 17.5 119 89-220 128-262 (355)
300 2vpj_A Kelch-like protein 12; 97.0 0.04 1.4E-06 44.2 15.4 64 159-224 159-234 (301)
301 2xzh_A Clathrin heavy chain 1; 96.9 0.11 3.8E-06 42.0 17.3 150 93-264 71-237 (365)
302 3sre_A PON1, serum paraoxonase 96.9 0.11 3.7E-06 42.9 17.4 164 32-221 51-252 (355)
303 3ii7_A Kelch-like protein 7; p 96.8 0.098 3.4E-06 42.0 16.0 185 44-264 57-273 (306)
304 2p9w_A MAL S 1 allergenic prot 96.6 0.055 1.9E-06 43.9 13.1 156 92-263 16-215 (334)
305 2vpj_A Kelch-like protein 12; 96.6 0.078 2.7E-06 42.5 14.2 104 159-264 112-232 (301)
306 1zgk_A Kelch-like ECH-associat 96.6 0.12 3.9E-06 41.7 15.0 64 159-224 168-243 (308)
307 2xn4_A Kelch-like protein 2; s 96.6 0.13 4.4E-06 41.2 15.2 64 159-224 155-232 (302)
308 1tl2_A L10, protein (tachylect 96.5 0.077 2.6E-06 40.3 12.4 111 89-216 41-158 (236)
309 3ei3_A DNA damage-binding prot 96.5 0.15 5.1E-06 49.2 17.2 153 32-221 830-999 (1158)
310 3pbp_A Nucleoporin NUP82; beta 96.5 0.15 5.2E-06 42.8 15.1 134 32-176 67-209 (452)
311 1zgk_A Kelch-like ECH-associat 96.4 0.1 3.4E-06 42.1 13.7 104 159-264 121-241 (308)
312 2xbg_A YCF48-like protein; pho 96.3 0.33 1.1E-05 39.5 21.5 154 30-222 121-279 (327)
313 3ii7_A Kelch-like protein 7; p 96.2 0.12 4E-06 41.5 13.1 145 44-224 13-181 (306)
314 4asc_A Kelch repeat and BTB do 96.1 0.16 5.6E-06 40.9 13.6 64 159-224 98-177 (315)
315 2xn4_A Kelch-like protein 2; s 96.1 0.3 1E-05 39.1 14.8 103 159-263 108-229 (302)
316 3das_A Putative oxidoreductase 96.0 0.52 1.8E-05 38.7 15.7 157 32-208 33-219 (347)
317 1cru_A Protein (soluble quinop 95.9 0.58 2E-05 40.1 16.3 64 32-105 28-97 (454)
318 4asc_A Kelch repeat and BTB do 95.8 0.35 1.2E-05 38.9 14.1 64 159-224 148-224 (315)
319 2ism_A Putative oxidoreductase 95.7 0.7 2.4E-05 38.0 21.0 151 32-209 32-221 (352)
320 2woz_A Kelch repeat and BTB do 95.7 0.28 9.6E-06 39.6 13.2 64 159-224 109-187 (318)
321 2ism_A Putative oxidoreductase 95.7 0.37 1.3E-05 39.7 13.9 104 89-209 31-153 (352)
322 2xzh_A Clathrin heavy chain 1; 95.6 0.7 2.4E-05 37.5 24.5 195 35-265 71-292 (365)
323 3a9g_A Putative uncharacterize 95.6 0.76 2.6E-05 37.9 16.2 152 32-209 30-216 (354)
324 2be1_A Serine/threonine-protei 95.5 0.14 4.8E-06 41.9 10.5 146 44-218 11-181 (339)
325 3sre_A PON1, serum paraoxonase 95.0 1.3 4.3E-05 36.6 18.2 156 32-220 113-297 (355)
326 1bpo_A Protein (clathrin); cla 95.0 1.4 4.9E-05 37.2 24.9 195 35-265 70-291 (494)
327 3a9g_A Putative uncharacterize 95.0 1.3 4.4E-05 36.5 16.4 101 89-209 29-153 (354)
328 1xi4_A Clathrin heavy chain; a 94.9 1.3 4.4E-05 43.4 16.2 206 32-270 107-338 (1630)
329 2g8s_A Glucose/sorbosone dehyd 94.5 1.7 5.7E-05 35.8 15.1 153 32-208 19-215 (353)
330 2woz_A Kelch repeat and BTB do 94.3 1.6 5.6E-05 35.0 17.9 65 159-225 158-235 (318)
331 1xi4_A Clathrin heavy chain; a 94.1 0.67 2.3E-05 45.3 12.4 150 93-264 70-236 (1630)
332 3amr_A 3-phytase; beta-propell 94.0 2.2 7.4E-05 35.0 22.3 143 44-220 41-209 (355)
333 1cru_A Protein (soluble quinop 93.9 1.9 6.7E-05 36.8 14.2 106 89-209 27-162 (454)
334 1bpo_A Protein (clathrin); cla 93.7 2.9 9.9E-05 35.5 21.0 192 1-223 127-333 (494)
335 3s25_A Hypothetical 7-bladed b 93.6 2.3 8E-05 34.0 16.3 136 95-263 110-255 (302)
336 3das_A Putative oxidoreductase 93.4 2.6 8.9E-05 34.5 13.4 105 88-209 31-158 (347)
337 2uvk_A YJHT; unknown function, 91.9 3.8 0.00013 33.4 12.8 52 171-224 286-345 (357)
338 3ott_A Two-component system se 91.8 7.5 0.00026 35.6 21.2 173 31-227 373-551 (758)
339 3ott_A Two-component system se 91.8 7.7 0.00026 35.5 19.9 154 30-224 62-223 (758)
340 3sbq_A Nitrous-oxide reductase 91.1 7.5 0.00026 34.1 14.7 113 90-209 324-453 (638)
341 2g8s_A Glucose/sorbosone dehyd 91.0 5.7 0.00019 32.5 16.3 108 89-209 18-148 (353)
342 2uvk_A YJHT; unknown function, 90.9 5 0.00017 32.7 12.5 21 41-62 19-40 (357)
343 3sbq_A Nitrous-oxide reductase 88.0 5.1 0.00017 35.1 10.3 84 32-118 324-408 (638)
344 4gq2_M Nucleoporin NUP120; bet 86.6 18 0.0006 34.3 14.2 38 149-187 237-274 (950)
345 2wg3_C Hedgehog-interacting pr 86.3 15 0.00051 31.4 14.5 29 89-117 14-44 (463)
346 2be1_A Serine/threonine-protei 86.2 0.74 2.5E-05 37.6 4.2 106 160-266 10-133 (339)
347 3ei3_A DNA damage-binding prot 85.2 29 0.00098 33.7 16.4 69 149-218 555-633 (1158)
348 2zwa_A Leucine carboxyl methyl 84.4 23 0.0008 32.0 14.9 68 41-119 500-578 (695)
349 2zwa_A Leucine carboxyl methyl 83.3 26 0.0009 31.7 16.3 152 41-225 451-639 (695)
350 3qhy_B Beta-lactamase inhibito 82.1 17 0.00057 28.6 16.4 144 89-263 102-246 (282)
351 2wg3_C Hedgehog-interacting pr 80.1 27 0.00093 29.8 11.8 29 33-61 16-44 (463)
352 3q6k_A 43.2 kDa salivary prote 79.1 26 0.0009 29.0 19.0 183 2-208 126-341 (381)
353 3f7f_A Nucleoporin NUP120; nuc 78.1 13 0.00043 33.7 9.2 36 150-188 224-259 (729)
354 4gq2_M Nucleoporin NUP120; bet 77.9 11 0.00036 35.7 9.2 37 31-68 236-272 (950)
355 4fhn_B Nucleoporin NUP120; pro 74.7 15 0.0005 35.6 9.4 37 150-187 240-276 (1139)
356 3zwu_A Alkaline phosphatase PH 66.8 32 0.0011 30.5 9.0 58 150-208 478-548 (592)
357 3qhy_B Beta-lactamase inhibito 64.2 50 0.0017 25.9 14.9 144 32-222 103-247 (282)
358 3s25_A Hypothetical 7-bladed b 60.9 61 0.0021 25.7 12.5 66 155-225 59-142 (302)
359 4a9v_A PHOX; hydrolase, beta-p 58.3 63 0.0021 28.5 9.1 59 150-209 478-549 (592)
360 3zwu_A Alkaline phosphatase PH 58.1 36 0.0012 30.2 7.7 59 90-166 477-548 (592)
361 4a9v_A PHOX; hydrolase, beta-p 55.3 64 0.0022 28.5 8.6 61 89-167 476-549 (592)
362 1xks_A Nuclear pore complex pr 50.0 1.2E+02 0.0041 25.8 15.5 104 2-117 60-171 (450)
363 4fhn_B Nucleoporin NUP120; pro 47.8 14 0.00047 35.8 3.7 36 32-68 239-274 (1139)
364 3f7f_A Nucleoporin NUP120; nuc 46.2 29 0.001 31.5 5.3 37 31-70 222-258 (729)
365 3q6k_A 43.2 kDa salivary prote 35.3 1.9E+02 0.0065 23.9 15.4 173 30-221 86-306 (381)
366 1q47_A Semaphorin 3A; beta pro 34.5 1.1E+02 0.0038 26.4 6.9 55 162-216 423-487 (495)
367 3al9_A Plexin-A2; beta-propell 27.8 1.2E+02 0.0041 26.5 6.1 66 150-216 402-476 (539)
368 2zux_A YESW protein; beta-prop 27.6 3.2E+02 0.011 24.1 11.5 24 87-110 177-202 (591)
369 3nvq_A Semaphorin-7A; beta-pro 26.6 2.1E+02 0.0071 25.4 7.3 57 161-217 381-445 (590)
370 1ukf_A Avirulence protein AVRP 25.5 87 0.003 22.8 4.0 35 30-64 118-152 (188)
371 4gz8_A Semaphorin-3A; multi-do 23.2 2.9E+02 0.01 24.9 7.8 55 162-216 431-495 (667)
372 1ukf_A Avirulence protein AVRP 21.1 68 0.0023 23.3 2.7 35 191-225 119-154 (188)
373 3b7f_A Glycosyl hydrolase, BNR 21.0 3.4E+02 0.011 22.0 17.4 67 149-218 178-259 (394)
374 3b7f_A Glycosyl hydrolase, BNR 20.5 3.4E+02 0.012 21.9 16.8 67 150-218 117-205 (394)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=262.10 Aligned_cols=223 Identities=12% Similarity=0.120 Sum_probs=180.6
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+++++....+.... .+|...|++++|+|++ ++|++|+.|++|++||+.++++ .
T Consensus 105 v~lWd~~~~~~~~~~~~~~-------~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~--------------~ 162 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCK-------YEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVV--------------L 162 (344)
T ss_dssp EEEEEECTTSSCEEEEEEE-------ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------------E
T ss_pred EEEEeccCCCceeEeeccc-------cCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcE--------------E
Confidence 6899999877554443321 2489999999999999 8999999999999999998872 2
Q ss_pred cccccCCCccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+ .+|...|.+++|+|++. +|+++ .|+.|++||++++ +....+..+.....+.+++| +|
T Consensus 163 ~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~~~-~p 224 (344)
T 4gqb_B 163 SSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP----------------KPASQIGCSAPGYLPTSLAW-HP 224 (344)
T ss_dssp EEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS----------------SCEEECC----CCCEEEEEE-CS
T ss_pred EEE-cCcCCceEEEEecCCCCCceeeecccccccccccccc----------------ceeeeeecceeeccceeeee-cC
Confidence 222 78999999999999985 77776 5999999999887 55555543332234899999 66
Q ss_pred -CCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhh
Q 021484 159 -NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 236 (312)
Q Consensus 159 -~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 236 (312)
++++|++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||++++++..+.+|...+..
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~ 304 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRD 304 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEE
T ss_pred CCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEE
Confidence 56788999999999999999999999999999999999999998 5799999999999999999887777788887755
Q ss_pred hhccCCCCc-eeEEecCCceEEEEEeccc
Q 021484 237 ANKQGREDH-SRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 237 ~~~~~~~~~-~l~s~~~d~~i~i~~~~~~ 264 (312)
. .+++++. ++++++.|+.|++|++...
T Consensus 305 v-~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 305 A-TWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp E-EECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred E-EEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 4 4677654 5678999999999998765
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=256.26 Aligned_cols=248 Identities=15% Similarity=0.216 Sum_probs=202.6
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||++..+....... .||...|.+++|+|++ .++++++.|++|++||+.+++. .
T Consensus 60 v~vW~~~~~~~~~~~~l---------~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~--------------~ 115 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSL---------EGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQ--------------I 115 (321)
T ss_dssp EEEEEEETTEEEEEEEE---------CCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--------------E
T ss_pred EEEEECCCCCeeeeeee---------ccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCE--------------E
Confidence 57888876543222222 3589999999999998 7999999999999999998873 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ ..|...+.+++|+|++++|+++ .++.|++|++.++ +....+..+... +.+++| +|+
T Consensus 116 ~~~-~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~----------------~~~~~~~~~~~~--v~~~~~-spd 175 (321)
T 3ow8_A 116 KSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG----------------KKEYSLDTRGKF--ILSIAY-SPD 175 (321)
T ss_dssp EEE-ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC----------------SEEEEEECSSSC--EEEEEE-CTT
T ss_pred EEE-eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC----------------ceeEEecCCCce--EEEEEE-CCC
Confidence 222 5667788899999999999997 5999999999887 566677777755 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKAN 238 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~ 238 (312)
+++|++|+.||.|++||+++++++..+.+|..+|.+++|+|++++|++++.|++|++||++.... ..+.+|...+.. .
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~-~ 254 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN-V 254 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE-E
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE-E
Confidence 99999999999999999999999999999999999999999999999999999999999988764 556667766644 4
Q ss_pred ccCCCCceeEEecCCceEEEEEecccCcc---------ce-eEeecCCCccCCCCCCCeEEEeec
Q 021484 239 KQGREDHSRITLTPDVIMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEGETYLLGF 293 (312)
Q Consensus 239 ~~~~~~~~l~s~~~d~~i~i~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~ 293 (312)
.+++++.++++++.|+.+++||+.+.... ++ ..+.+++..+.+...++.|.+||.
T Consensus 255 ~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 255 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 47888999999999999999998754321 11 255666666777667777777764
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=260.80 Aligned_cols=246 Identities=14% Similarity=0.195 Sum_probs=202.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|++++|+|++ .+|++|+.|++|++||+.++++ .
T Consensus 132 i~vwd~~~~~~~~~l~-----------~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~~--------------~ 185 (410)
T 1vyh_C 132 IKVWDYETGDFERTLK-----------GHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFEC--------------I 185 (410)
T ss_dssp EEEEETTTCCCCEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSCE--------------E
T ss_pred EEEEECCCCcEEEEEe-----------ccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCce--------------e
Confidence 5789988766444332 488899999999998 7999999999999999988762 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ .+|...|.+++|+|++.+|+++ .|+.|++||+.++ ..+..+.+|... |.++.| +++
T Consensus 186 ~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~ 245 (410)
T 1vyh_C 186 RTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG----------------YCVKTFTGHREW--VRMVRP-NQD 245 (410)
T ss_dssp ECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CTT
T ss_pred EEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEEeCCCcc--EEEEEE-CCC
Confidence 222 7899999999999999988886 5999999999987 778889999866 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCC--------------------CCeEEEEeCCCcEEEccC
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH--------------------IPMFATCGIEKTVKLWAP 219 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~--------------------~~~l~t~~~d~~i~iwd~ 219 (312)
+.+|++|+.|+.|++||+.++++...+.+|...|.+++|+|+ +.+|++++.|++|++||+
T Consensus 246 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~ 325 (410)
T 1vyh_C 246 GTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325 (410)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999999999996 668999999999999999
Q ss_pred CCCC-CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccCccce----------eEeecCCCccCCCCCCCeE
Q 021484 220 MPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFESDEEEGET 288 (312)
Q Consensus 220 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v 288 (312)
+++. +..+.+|...+.. ..+++++.++++++.|+.|++||+........ ..+.++...+.++..++.|
T Consensus 326 ~~~~~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i 404 (410)
T 1vyh_C 326 STGMCLMTLVGHDNWVRG-VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 404 (410)
T ss_dssp TTTEEEEEEECCSSCEEE-EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCCceEEEEECCCCcEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 8876 3556667666643 45788899999999999999999865432211 1445556666666666666
Q ss_pred EEeec
Q 021484 289 YLLGF 293 (312)
Q Consensus 289 ~~~~~ 293 (312)
.+|+.
T Consensus 405 ~vW~~ 409 (410)
T 1vyh_C 405 KVWEC 409 (410)
T ss_dssp EEEC-
T ss_pred EEEeC
Confidence 66653
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.9e-36 Score=248.46 Aligned_cols=234 Identities=17% Similarity=0.239 Sum_probs=192.4
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|..+|++++|+|++ .+|++|+.||+|++||+.+++. ...+ ..|..+|.+++|+|++++|+++
T Consensus 11 ~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~--------------~~~~-~~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVE--------------VRSI-QVTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp EECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--------------EEEE-ECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCce--------------eEEe-eccCCcEEEEEEeCCCCEEEEEC
Confidence 488899999999999 8999999999999999998862 2222 6788999999999999999987
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC-eeEEE
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRL 185 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~ 185 (312)
.|+.|++||+.++ +.+..+.+|... |.+++| +|++++|++|+.|++|++||++++ .....
T Consensus 75 ~d~~i~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 135 (304)
T 2ynn_A 75 DDFRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (304)
T ss_dssp TTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEEGGGTTEEEEE
T ss_pred CCCEEEEEECCCC----------------cEEEEEeCCCCc--EEEEEE-cCCCCEEEEECCCCeEEEEECCCCcchhhh
Confidence 5999999999987 788889999876 999999 999999999999999999999877 55677
Q ss_pred eecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCC-CCCC-CChhhhhhhhccC--CCCceeEEecCCceEEEEE
Q 021484 186 MVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLP-DNAEKIMKANKQG--REDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~~~~--~~~~~l~s~~~d~~i~i~~ 260 (312)
+.+|...|.+++|+| ++..|++++.|++|++||++.... ..+. .+...+ ....+. +++.++++++.|+.+++||
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV-NYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCE-EEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcE-EEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 889999999999999 578899999999999999976653 2222 232333 222233 3677999999999999999
Q ss_pred ecccCcc---------c-eeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 261 LQRRQTL---------A-YRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 261 ~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
++..... + ...+.|+...+.+...++.|.+||...+.
T Consensus 215 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 8754211 1 22667788888888889999999987654
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=249.18 Aligned_cols=214 Identities=17% Similarity=0.315 Sum_probs=185.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+.. |...+.+++|+|++ ++|++|+.|+.|++|++.+++. .
T Consensus 104 i~lWd~~~~~~~~~~~~-----------~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~--------------~ 157 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDA-----------GPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKK--------------E 157 (321)
T ss_dssp EEEEETTTTEEEEEEEC-----------CTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSE--------------E
T ss_pred EEEEECCCCCEEEEEeC-----------CCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCce--------------e
Confidence 57999988765444432 56678999999999 8999999999999999998762 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
.. +..|...|.+++|+|++++|+++ .|+.|++||+.++ +.+..+.+|... |.+++| +|+
T Consensus 158 ~~-~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~----------------~~~~~~~~h~~~--v~~l~~-spd 217 (321)
T 3ow8_A 158 YS-LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG----------------KLLHTLEGHAMP--IRSLTF-SPD 217 (321)
T ss_dssp EE-EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--CCEEEE-CTT
T ss_pred EE-ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC----------------cEEEEEcccCCc--eeEEEE-cCC
Confidence 22 25677889999999999999997 5999999999887 677888888866 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC-CCCCCCChhhhhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKAN 238 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~ 238 (312)
+++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++ +..+.+|...+.. .
T Consensus 218 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~-v 296 (321)
T 3ow8_A 218 SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG-V 296 (321)
T ss_dssp SCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE-E
T ss_pred CCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEE-E
Confidence 9999999999999999999999999999999999999999999999999999999999998876 3556667776644 4
Q ss_pred ccCCCCceeEEecCCceEEEEEe
Q 021484 239 KQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 239 ~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
.+++++..+++++.|+.+++||+
T Consensus 297 ~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 297 KYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EECTTSSEEEEEETTCCEEEEEC
T ss_pred EECCCCCEEEEEeCCCeEEEEeC
Confidence 47888999999999999999985
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.2e-36 Score=255.50 Aligned_cols=235 Identities=15% Similarity=0.246 Sum_probs=198.3
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.+|..+|++++|+|++ .+|++|+.||+|++||+.+++ .... +.+|...|.+++|+|++++|+++
T Consensus 105 ~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~--------------~~~~-l~~h~~~V~~v~~~~~~~~l~sg 168 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGD--------------FERT-LKGHTDSVQDISFDHSGKLLASC 168 (410)
T ss_dssp ECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCC--------------CCEE-ECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEE-EeccCCcEEEEEEcCCCCEEEEE
Confidence 4799999999999998 799999999999999999886 2222 27899999999999999999987
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|+.|++||+.+. +.+..+.+|... |.+++| +|++++|++|+.|+.|++||+++++++..
T Consensus 169 s~D~~i~iwd~~~~----------------~~~~~~~~h~~~--V~~v~~-~p~~~~l~s~s~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 169 SADMTIKLWDFQGF----------------ECIRTMHGHDHN--VSSVSI-MPNGDHIVSASRDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp ETTSCCCEEETTSS----------------CEEECCCCCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eCCCeEEEEeCCCC----------------ceeEEEcCCCCC--EEEEEE-eCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 5999999999887 677888888866 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCC--------------------C
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGRE--------------------D 244 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~--------------------~ 244 (312)
+.+|...|.++.|+|++.++++++.|++|++||+.++.. ..+.+|...+.. ..+.++ +
T Consensus 230 ~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC-ISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE-EEECCSCGGGGGGGCCSCC-------C
T ss_pred EeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEE-EEEcCcccccchhhhccccccccCCCC
Confidence 999999999999999999999999999999999988763 344445544432 223332 5
Q ss_pred ceeEEecCCceEEEEEecccCcc---------c-eeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 245 HSRITLTPDVIMHVLRLQRRQTL---------A-YRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 245 ~~l~s~~~d~~i~i~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
.++++++.|+.+++||++..... + -..+.+++..+.+...++.|.+||...+.
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 68999999999999998754221 1 12667788888888899999999986653
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-36 Score=253.93 Aligned_cols=223 Identities=11% Similarity=0.104 Sum_probs=175.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+.+.+......... .+|...|++++|+|++ ++|++|+.|+.|++||+.++++ .
T Consensus 117 v~lWd~~~~~~~~~~~~~~-------~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~--------------~ 174 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAK-------YEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAV--------------L 174 (357)
T ss_dssp EEEC--------CCCCEEE-------CCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEE--------------E
T ss_pred EEEeeccccceeEEEeecc-------CCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcE--------------E
Confidence 5899998776443332221 2489999999999998 8999999999999999998872 2
Q ss_pred cccccCCCccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+ .+|...|.+++|+|++. +++++ .|+.|++||++++ +....+..+.....+.+++| +|
T Consensus 175 ~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~----------------~~~~~~~~~~~~~~v~~v~~-sp 236 (357)
T 4g56_B 175 KSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP----------------KPATRIDFCASDTIPTSVTW-HP 236 (357)
T ss_dssp EEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS----------------SCBCBCCCTTCCSCEEEEEE-CT
T ss_pred EEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC----------------ceeeeeeeccccccccchhh-hh
Confidence 222 78999999999999985 66665 6999999999887 44444443333344999999 77
Q ss_pred C-CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhh
Q 021484 159 N-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 236 (312)
Q Consensus 159 ~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 236 (312)
+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++ ++|++++.|++|+|||++++++....+|...+..
T Consensus 237 ~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~ 316 (357)
T 4g56_B 237 EKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTG 316 (357)
T ss_dssp TSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEE
T ss_pred cccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEE
Confidence 6 5788999999999999999999999999999999999999987 5799999999999999999886555578777755
Q ss_pred hhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 237 ANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 237 ~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
. .++| ++.++++++.|+.|++|++...
T Consensus 317 v-afsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 317 V-AWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp E-EECSSSTTEEEEEETTSCEEEEECC--
T ss_pred E-EEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 4 4665 7889999999999999998765
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-35 Score=247.22 Aligned_cols=221 Identities=14% Similarity=0.231 Sum_probs=181.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|.+++|+|++ ++|++|+.|+.|++|++.+.+.. ...
T Consensus 79 v~iWd~~~~~~~~~~~-----------~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~-----------~~~ 135 (340)
T 1got_B 79 LIIWDSYTTNKVHAIP-----------LRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGN-----------VRV 135 (340)
T ss_dssp EEEEETTTCCEEEEEE-----------CSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBS-----------CEE
T ss_pred EEEEECCCCCcceEee-----------cCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCc-----------cee
Confidence 5789887765433333 267889999999998 89999999999999999865310 011
Q ss_pred cccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND 160 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~ 160 (312)
...+.+|...|.++.|++++.+++++.|+.|++||+.++ +....+.+|... |.+++| +|++
T Consensus 136 ~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~ 196 (340)
T 1got_B 136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG----------------QQTTTFTGHTGD--VMSLSL-APDT 196 (340)
T ss_dssp EEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTS
T ss_pred EEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC----------------cEEEEEcCCCCc--eEEEEE-CCCC
Confidence 222368999999999999887555567999999999887 677888889866 999999 9999
Q ss_pred CEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCC--CChhhhhhh
Q 021484 161 EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP--DNAEKIMKA 237 (312)
Q Consensus 161 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~--~~~~~~~~~ 237 (312)
++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.|++|++||++.... ..+. .+... +..
T Consensus 197 ~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~-v~~ 275 (340)
T 1got_B 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG-ITS 275 (340)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC-EEE
T ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccc-eEE
Confidence 9999999999999999999999999999999999999999999999999999999999987653 2221 11122 344
Q ss_pred hccCCCCceeEEecCCceEEEEEeccc
Q 021484 238 NKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 238 ~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
..+++++.++++++.|+.+++||+...
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccC
Confidence 567889999999999999999997654
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.1e-35 Score=241.78 Aligned_cols=250 Identities=13% Similarity=0.151 Sum_probs=197.2
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.......-.....+ .+|...|.+++|+|++ .+|++|+.|++|++||+.+++. .
T Consensus 42 v~~W~~~~~~~~~~~~~~~~------~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~~--------------~ 100 (319)
T 3frx_A 42 LISWKLTGDDQKFGVPVRSF------KGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGET--------------Y 100 (319)
T ss_dssp EEEEEEEEETTEEEEEEEEE------ECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE--------------E
T ss_pred EEEecCCCCCccccccceEE------eCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCe--------------e
Confidence 57888865432211111111 3589999999999998 8999999999999999998872 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ .+|...|.+++|+|++.+|+++ .|+.|++||++. ..+..+.+|... |.+++| .|.
T Consensus 101 ~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-----------------~~~~~~~~h~~~--v~~~~~-~~~ 159 (319)
T 3frx_A 101 QRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-----------------QCLATLLGHNDW--VSQVRV-VPN 159 (319)
T ss_dssp EEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-----------------CEEEEECCCSSC--EEEEEE-CCC
T ss_pred EEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------------CeEEEEeccCCc--EEEEEE-ccC
Confidence 222 7899999999999999999987 599999999975 466778888866 999999 774
Q ss_pred ------CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChh
Q 021484 160 ------DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAE 232 (312)
Q Consensus 160 ------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~ 232 (312)
+.+|++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|++|++||+.+.+. ..+. ...
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 238 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQD 238 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCS
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCC
Confidence 45899999999999999999999999999999999999999999999999999999999988763 3332 223
Q ss_pred hhhhhhccCCCCceeEEecCCceEEEEEecccCc------------------cceeEeecCCCccCCCCCCCeEEEeecC
Q 021484 233 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT------------------LAYRERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
.+ ....+++++.++++++.+ .+++|++..... ..-..++|++..+.++..++.|.+|++.
T Consensus 239 ~v-~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 239 EV-FSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CE-EEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cE-EEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 33 445578888888777655 589998754211 1123678888888888888889888875
Q ss_pred C
Q 021484 295 D 295 (312)
Q Consensus 295 ~ 295 (312)
.
T Consensus 317 t 317 (319)
T 3frx_A 317 T 317 (319)
T ss_dssp E
T ss_pred e
Confidence 4
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-34 Score=238.84 Aligned_cols=236 Identities=17% Similarity=0.296 Sum_probs=196.3
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.+|..+|++++|+|++ ++|++|+.||.|++|++.+++. .. .+.+|...|.+++|+|++++|+++
T Consensus 20 ~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~--------------~~-~~~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKF--------------EK-TISGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE--------------EE-EECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCccc--------------ch-hhccCCCceEEEEEcCCCCEEEEE
Confidence 4699999999999998 8999999999999999987762 22 227889999999999999999886
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|+.|++||+.++ +.+..+.+|... |.+++| +|++++|++|+.|+.|++||+++++.+..
T Consensus 84 ~~d~~i~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 84 SDDKTLKIWDVSSG----------------KCLKTLKGHSNY--VFCCNF-NPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCC----------------cEEEEEcCCCCC--EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 5999999999887 677888888866 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+..|..+|.+++|+|++++|++++.|+.|++||+++++. ..+.......+....+++++.++++++.|+.+++||+...
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 999999999999999999999999999999999988763 3332233333455668889999999999999999998754
Q ss_pred Cccce------------eEe-ecCCCccCCCCCCCeEEEeecCCCC
Q 021484 265 QTLAY------------RER-RYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 265 ~~~~~------------~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..... ... .++...+.+...++.|++++...+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 32211 111 2344556777788899999987664
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.9e-35 Score=239.60 Aligned_cols=219 Identities=17% Similarity=0.196 Sum_probs=180.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+......+.. |..+|.+++|+|++ ++|++|+.|++|++||+.+++ +.
T Consensus 37 v~lWd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~--------------~~ 90 (304)
T 2ynn_A 37 VELWNYETQVEVRSIQV-----------TETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE--------------KV 90 (304)
T ss_dssp EEEEETTTTEEEEEEEC-----------CSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC--------------EE
T ss_pred EEEEECCCCceeEEeec-----------cCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCc--------------EE
Confidence 58999987654444432 67789999999998 899999999999999999886 22
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP- 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~- 158 (312)
..+ .+|...|.+++|+|++.+|+++ .|+.|++||++++. .....+.+|... |.+++| +|
T Consensus 91 ~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---------------~~~~~~~~h~~~--v~~v~~-~p~ 151 (304)
T 2ynn_A 91 VDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF-NPK 151 (304)
T ss_dssp EEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT---------------EEEEEECCCCSC--EEEEEE-CTT
T ss_pred EEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc---------------chhhhhcccCCc--EEEEEE-CCC
Confidence 222 7899999999999999999987 59999999998651 344667888866 999999 77
Q ss_pred CCCEEEEeccCceEEEEeccCCeeEEEee-cCccceEEEEEcC--CCCeEEEEeCCCcEEEccCCCCC-CCCCCCChhhh
Q 021484 159 NDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKI 234 (312)
Q Consensus 159 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 234 (312)
++.+|++|+.|+.|++||++++++...+. +|...+..+.|+| ++++|++++.|++|++||+++++ +..+.+|...+
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE
Confidence 67899999999999999998877766654 4567899999987 67899999999999999999876 35566677666
Q ss_pred hhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 235 MKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 235 ~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
....+++++.++++++.|+.+++||+.+..
T Consensus 232 -~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 232 -SFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp -EEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred -EEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 444578888999999999999999987653
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=246.61 Aligned_cols=236 Identities=10% Similarity=0.070 Sum_probs=186.0
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-c
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 107 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 107 (312)
|..+|.+++|+|++ .|++|+.||+|++||+.+++... .......+|...|++++|+|+|++|+++ .
T Consensus 81 ~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~~~~~-----------~~~~~~~~H~~~V~~v~~spdg~~l~sgs~ 147 (344)
T 4gqb_B 81 TEAGVADLTWVGER--GILVASDSGAVELWELDENETLI-----------VSKFCKYEHDDIVSTVSVLSSGTQAVSGSK 147 (344)
T ss_dssp ESSCEEEEEEETTT--EEEEEETTSEEEEEEECTTSSCE-----------EEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCCCcee-----------EeeccccCCCCCEEEEEECCCCCEEEEEeC
Confidence 45679999999975 68899999999999999876210 1122235899999999999999999997 5
Q ss_pred CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC-CEEEEeccCceEEEEeccCCeeEEEe
Q 021484 108 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 108 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
|+.|++||+.++ +.+..+.+|... |.+++| ++++ .+|++++.|+.|++||++++++...+
T Consensus 148 d~~i~iwd~~~~----------------~~~~~~~~h~~~--V~~~~~-~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 148 DICIKVWDLAQQ----------------VVLSSYRAHAAQ--VTCVAA-SPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp TSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred CCeEEEEECCCC----------------cEEEEEcCcCCc--eEEEEe-cCCCCCceeeeccccccccccccccceeeee
Confidence 999999999988 788899999976 999999 7877 57899999999999999999988877
Q ss_pred e--cCccceEEEEEcCC-CCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCC-ceeEEecCCceEEEEEe
Q 021484 187 V--GDRHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGRED-HSRITLTPDVIMHVLRL 261 (312)
Q Consensus 187 ~--~~~~~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~~~ 261 (312)
. .|...+.+++|+|+ +++|++|+.|++|++||+++++. ..+.+|...+... .+++++ .++++++.|+.|++||+
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v-~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL-VFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE-EECSSSSCCEEEEETTSCEEEECT
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE-EEccCCCeEEEEEeCCCeEEEEEC
Confidence 4 35567899999995 46789999999999999998764 5667777776444 467765 67899999999999997
Q ss_pred cccCcc--------ce-eEeecCCCc-cCCCCCCCeEEEeecCCCC
Q 021484 262 QRRQTL--------AY-RERRYNAAD-FESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 262 ~~~~~~--------~~-~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 297 (312)
...... +. ..+.|+... +.+...++.|.++++....
T Consensus 288 ~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 288 SLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 654322 12 256777665 4566778889999886543
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=242.54 Aligned_cols=238 Identities=17% Similarity=0.240 Sum_probs=190.5
Q ss_pred CCcc-ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 28 MNSI-RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 28 ~h~~-~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
+|.. .|.+++|+|++ .+|++|+.|++|++||+.++... +...+..+|...|.+++|+|++++|+++
T Consensus 13 ~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~------------~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWI------------CKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp CSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEE------------EEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcce------------eeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 4777 89999999999 89999999999999999876521 1222336899999999999999999997
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC---ee
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG---KL 182 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~---~~ 182 (312)
.|+.+++|++..+. .+....+.+|... |.+++| +|++++|++|+.|+.|++||++++ ++
T Consensus 80 s~D~~v~iw~~~~~~--------------~~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 80 SFDATTCIWKKNQDD--------------FECVTTLEGHENE--VKSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp ETTSCEEEEEECCC---------------EEEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred ECCCcEEEEEccCCC--------------eEEEEEccCCCCC--ceEEEE-eCCCCEEEEEECCCeEEEEECCCCCCeEE
Confidence 59999999987641 1245677888866 999999 999999999999999999999875 34
Q ss_pred EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC---CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEE
Q 021484 183 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 259 (312)
Q Consensus 183 ~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~ 259 (312)
+..+.+|...|.+++|+|++++|++++.|++|++|+...+. ...+.+|...+.. ..+++++.++++++.|+.+++|
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~-l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWS-LAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE-EEECTTSSEEEEEETTSCEEEE
T ss_pred EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEE-EEECCCCCEEEEEeCCCeEEEe
Confidence 66778899999999999999999999999999999988764 2456667766644 4578899999999999999999
Q ss_pred EecccC-------------------------ccce-eEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 260 RLQRRQ-------------------------TLAY-RERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 260 ~~~~~~-------------------------~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
+..... ..++ ..+.+....+.+...++.+.+++...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 964321 1111 145556666666666777888876544
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=239.60 Aligned_cols=262 Identities=16% Similarity=0.204 Sum_probs=183.4
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.......+..... .+|...|++++|+|++ .+|++|+.|++|++||+...... ......
T Consensus 36 i~lw~~~~~~~~~~~~~~~-------~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~--------~~~~~~ 99 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDE-------TAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADR--------TFEMDL 99 (330)
T ss_dssp EEEEECSSSCCEEEEEECT-------TCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------CCCEE
T ss_pred EEEEEecCCCeEEEEEEec-------CCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCc--------ccccee
Confidence 5789987653222221111 1288899999999998 89999999999999998643200 000012
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+.+|...|.+++|+|++++|+++ .|+.|++||+.... ...+.+..+.+|... |.+++| +|+
T Consensus 100 ~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~------------~~~~~~~~~~~h~~~--v~~v~~-~p~ 164 (330)
T 2hes_X 100 LAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG------------EEYECISVLQEHSQD--VKHVIW-HPS 164 (330)
T ss_dssp EEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTC------------CCCEEEEEECCCSSC--EEEEEE-CSS
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC------------CCeEEEEEeccCCCc--eEEEEE-CCC
Confidence 22337899999999999999999997 59999999995320 001345667788866 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCC--eeEEEeecCccceEEEEEcCC--CCeEEEEeCCCcEEEccCCCCC---------CCC
Q 021484 160 DEYVMSGSDCGHLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPH--IPMFATCGIEKTVKLWAPMPTD---------FPP 226 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~l~t~~~d~~i~iwd~~~~~---------~~~ 226 (312)
+++|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +..|++++.|++|++|++.... ...
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence 999999999999999998876 678889999999999999998 6789999999999999987542 122
Q ss_pred CCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc-------------cce-eEeec--CCCccCCCCCCCeEE
Q 021484 227 LPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT-------------LAY-RERRY--NAADFESDEEEGETY 289 (312)
Q Consensus 227 ~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~-------------~~~-~~~~~--~~~~~~~~~~~~~v~ 289 (312)
+.. |...+.... +++ +.++++++.|+.+++|+...... .+. ..+.+ ++..+++...++.|.
T Consensus 245 ~~~~h~~~v~~v~-~s~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~ 322 (330)
T 2hes_X 245 LPDVHKRQVYNVA-WGF-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVN 322 (330)
T ss_dssp CCSCCSSCEEEEE-ECT-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEE
T ss_pred cccccccceEEEE-EcC-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEE
Confidence 333 555554443 443 45899999999999999764310 111 13344 455677777778888
Q ss_pred EeecCC
Q 021484 290 LLGFSD 295 (312)
Q Consensus 290 ~~~~~~ 295 (312)
+|++..
T Consensus 323 ~W~~~~ 328 (330)
T 2hes_X 323 FWSLEK 328 (330)
T ss_dssp EEEC--
T ss_pred EEEecc
Confidence 887643
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=238.76 Aligned_cols=259 Identities=15% Similarity=0.192 Sum_probs=194.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+........... ..+|...|++++|+|++ ++|++|+.|+++++|++..+.. ..
T Consensus 40 i~iw~~~~~~~~~~~~~--------~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~-------------~~ 97 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVL--------SEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDF-------------EC 97 (345)
T ss_dssp EEEEEEETTEEEEEEEE--------CSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-E-------------EE
T ss_pred EEEEEcCCCcceeeeee--------ccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCe-------------EE
Confidence 57888876542211111 12589999999999998 8999999999999999886642 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+.+|...|.+++|+|++++|+++ .|+.|++||+..+. .......+.+|... |.+++| +|+
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~-~p~ 161 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-------------EYECVSVLNSHTQD--VKHVVW-HPS 161 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-------------CEEEEEEECCCCSC--EEEEEE-CSS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-------------CeEEEEEecCcCCC--eEEEEE-CCC
Confidence 22237899999999999999999997 59999999997651 00234566778766 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCe--eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC-CCC----------
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPP---------- 226 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~---------- 226 (312)
+++|++++.|+.|++||.++++ +...+.+|...|.+++|+|++++|++++.|++|++|+..... ...
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 9999999999999999998875 456788999999999999999999999999999999964321 111
Q ss_pred -----CCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEecccC------------------ccce-eEeecCC-CccC
Q 021484 227 -----LPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ------------------TLAY-RERRYNA-ADFE 280 (312)
Q Consensus 227 -----~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~------------------~~~~-~~~~~~~-~~~~ 280 (312)
+.+ |...+ ....+++++..+++++.|+.+++|+..... ..+. ..+.|+. ..++
T Consensus 242 ~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 320 (345)
T 3fm0_A 242 KCICTLSGFHSRTI-YDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLA 320 (345)
T ss_dssp EEEEEECSSCSSCE-EEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEE
T ss_pred ceeEEecCCCCCcE-EEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEE
Confidence 111 33333 344467788899999999999999975431 1111 2566665 3677
Q ss_pred CCCCCCeEEEeecCCCCC
Q 021484 281 SDEEEGETYLLGFSDSDA 298 (312)
Q Consensus 281 ~~~~~~~v~~~~~~~~~~ 298 (312)
+..+++.|.+|+...+..
T Consensus 321 S~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 321 SCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEETTSCEEEEEECC---
T ss_pred EcCCCCcEEEEEecCCCC
Confidence 888888899998876554
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.5e-34 Score=240.32 Aligned_cols=251 Identities=14% Similarity=0.152 Sum_probs=193.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||..+.+....+.. |...|.+++|+|++ .+|++|+.|+.+++|++...... .. ...
T Consensus 88 v~vWd~~~~~~~~~~~~-----------~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~-------~~--~~~ 146 (354)
T 2pbi_B 88 VIVWDSFTTNKEHAVTM-----------PCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNE-------NM--AAK 146 (354)
T ss_dssp EEEEETTTCCEEEEEEC-----------SSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTC-------CS--GGG
T ss_pred EEEEECCCCCcceEEec-----------CCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEeccccc-------cc--ccc
Confidence 57899877654444332 56789999999999 89999999999999998754310 00 011
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP- 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~- 158 (312)
...+..|...|.+++|+|++..|+++ .|++|++||+.++ +.+..+.+|... |.+++| +|
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~ 207 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG----------------QLLQSFHGHGAD--VLCLDL-APS 207 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CCC
T ss_pred ceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC----------------eEEEEEcCCCCC--eEEEEE-EeC
Confidence 22236799999999999999988886 5999999999987 788889999866 999998 66
Q ss_pred -CCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCCh-hhhh
Q 021484 159 -NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA-EKIM 235 (312)
Q Consensus 159 -~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~-~~~~ 235 (312)
++++|++|+.||.|++||+++++++..+.+|...|++++|+|++.+|++++.|++|++||++.... ..+..+. ....
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 578999999999999999999999999999999999999999999999999999999999987642 1111111 1112
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCcc---------c-eeEeecCCCccCCCCCCCeEEEe
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQTL---------A-YRERRYNAADFESDEEEGETYLL 291 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~ 291 (312)
....+++++.++++++.|+.+++||+...... + ...+.|++..+.+...++.|.+|
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 34457788999999999999999998654322 1 11455555555555555555554
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.2e-35 Score=246.90 Aligned_cols=252 Identities=13% Similarity=0.112 Sum_probs=196.0
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.||..+|++++|+|++ ++|++|+.|++|++||+.+++. ...+ ..|...|.+++|+|++++|+++
T Consensus 63 ~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~--------------~~~~-~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQK--------------THAI-KLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEE--------------EEEE-ECCCTTCCCCEECTTSSEEEEC
T ss_pred cccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcc--------------ceEE-ecCCCCEEEEEECCCCCEEEEe
Confidence 4699999999999998 8999999999999999988762 2222 6778888899999999988886
Q ss_pred -cCCcEEEEEcCCCc----------------------------------CCCCCcCCcccccCCCCCceE-----ecccC
Q 021484 107 -NDELVYLFEKNMGL----------------------------------GPSPLSLSPEDLQKREEPQVY-----SGHRN 146 (312)
Q Consensus 107 -~d~~i~iwd~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 146 (312)
.|+.+++|++.+.. +..+..+..|++.+.+.+..+ .+|..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 59999999875421 011233455556655555555 45665
Q ss_pred CceeeEEEEecCCCCEEEEeccCceEEEEecc-CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-
Q 021484 147 SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK-GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF- 224 (312)
Q Consensus 147 ~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~- 224 (312)
. |.+++|.++++++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|++|++||++++..
T Consensus 207 ~--v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 207 D--VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp C--EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred C--eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 5 99999944589999999999999999998 5577888999999999999999999999999999999999988652
Q ss_pred CCCCCC------hhhhhhhhccCCCCceeEEecCCceEEEEEecccCc-------------c-ceeEeecCCCccCCCCC
Q 021484 225 PPLPDN------AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT-------------L-AYRERRYNAADFESDEE 284 (312)
Q Consensus 225 ~~~~~~------~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~ 284 (312)
..+..+ ....+....+++++.++++++.|+.+++||+..... . ....+.|++..+.++..
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 111111 112345566888999999999999999999643221 1 12267888888999988
Q ss_pred CCeEEEeecCCC
Q 021484 285 EGETYLLGFSDS 296 (312)
Q Consensus 285 ~~~v~~~~~~~~ 296 (312)
++.+.+|+++..
T Consensus 365 D~~i~iW~~~~~ 376 (380)
T 3iz6_a 365 DKNLKIWAFSGH 376 (380)
T ss_dssp TSCEEEEECCSS
T ss_pred CCCEEEEecCCC
Confidence 999999998654
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5e-34 Score=238.76 Aligned_cols=238 Identities=12% Similarity=0.145 Sum_probs=196.5
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.+|..+|++++|+|++ ++|++|+.||+|++||+.+++. ...+ ..|...|.+++|+|++++|+++
T Consensus 52 ~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~--------------~~~~-~~~~~~v~~~~~s~~~~~l~s~ 115 (340)
T 1got_B 52 RGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTNK--------------VHAI-PLRSSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCE--------------EEEE-ECSSSCEEEEEECTTSSEEEEE
T ss_pred cCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCCc--------------ceEe-ecCCccEEEEEECCCCCEEEEE
Confidence 4799999999999998 8999999999999999988762 2222 6788899999999999999987
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|+.+++|++.+... .......+.+|... |.++.| ++++. +++++.|+.|++||+.+++++..
T Consensus 116 ~~d~~v~iw~~~~~~~------------~~~~~~~~~~h~~~--v~~~~~-~~~~~-l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 116 GLDNICSIYNLKTREG------------NVRVSRELAGHTGY--LSCCRF-LDDNQ-IVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ETTCEEEEEETTTCSB------------SCEEEEEEECCSSC--EEEEEE-EETTE-EEEEETTSCEEEEETTTTEEEEE
T ss_pred eCCCeEEEEECccCCC------------cceeEEEecCCCcc--EEEEEE-CCCCc-EEEEECCCcEEEEECCCCcEEEE
Confidence 599999999976410 01234567788866 999999 66665 88999999999999999999999
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+.+|.+.|.+++|+|+++++++++.|++|++||++++.. ..+.+|...+ ....+++++.++++++.|+.+++||++..
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI-NAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE-EEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCE-EEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999999999999999999999999999988763 5566666666 44457889999999999999999998654
Q ss_pred Ccc------------ceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 265 QTL------------AYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 265 ~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
... ....+.|++..+.++..++.+.++|...+.
T Consensus 259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 221 112677888888888888999999976553
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-33 Score=235.72 Aligned_cols=230 Identities=14% Similarity=0.148 Sum_probs=177.1
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|...|++++|+|++ .++++|+.|++|++||+++++. ...+ .+|...|.+++|+|++++|+++
T Consensus 74 ~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~--------------~~~~-~~h~~~v~~v~~sp~~~~l~s~~ 137 (343)
T 2xzm_R 74 GHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTT--------------YKRF-VGHQSEVYSVAFSPDNRQILSAG 137 (343)
T ss_dssp CCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCE--------------EEEE-ECCCSCEEEEEECSSTTEEEEEE
T ss_pred cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcE--------------EEEE-cCCCCcEEEEEECCCCCEEEEEc
Confidence 589999999999998 8999999999999999998862 2222 7899999999999999988886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE---ecccCCceeeEEEEecCCC----------CEEEEeccCceEE
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SGHRNSQTVKGVNFFGPND----------EYVMSGSDCGHLF 173 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~v~~~s~~~----------~~l~~~~~dg~v~ 173 (312)
.|+.|++||+... ..... .+|... |.+++| +|++ .+|++++.||.|+
T Consensus 138 ~d~~i~~wd~~~~-----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 138 AEREIKLWNILGE-----------------CKFSSAEKENHSDW--VSCVRY-SPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp TTSCEEEEESSSC-----------------EEEECCTTTSCSSC--EEEEEE-CCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CCCEEEEEeccCC-----------------ceeeeecccCCCce--eeeeee-ccccccccccCCCCCEEEEEcCCCEEE
Confidence 5999999999743 21112 245544 999999 8876 7899999999999
Q ss_pred EEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC-CCCCCCChhhhhhhhccCCCCceeEEecC
Q 021484 174 IWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTP 252 (312)
Q Consensus 174 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 252 (312)
+||. ..+....+.+|...|.+++|+|++++|++++.|++|++||+.... ......+... +....+++++.+++ ++.
T Consensus 198 iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~-v~~v~~sp~~~~la-~~~ 274 (343)
T 2xzm_R 198 VWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGST-INQIAFNPKLQWVA-VGT 274 (343)
T ss_dssp EEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSC-EEEEEECSSSCEEE-EEE
T ss_pred EEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCc-EEEEEECCCCCEEE-EEC
Confidence 9994 567778889999999999999999999999999999999995432 2211112222 34455777776654 556
Q ss_pred CceEEEEEecccCccc-----------------------eeEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 253 DVIMHVLRLQRRQTLA-----------------------YRERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 253 d~~i~i~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
|+.+++|++....... -..+.|++..+.++..++.|.+|++..+
T Consensus 275 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 275 DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 8889999986532211 1256677777777777778888876543
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-34 Score=241.99 Aligned_cols=237 Identities=11% Similarity=0.110 Sum_probs=181.2
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|...|++++|+|++ .+++++.||+|++||+.+++.... ......+|...|.+++|+|++++|+++
T Consensus 92 ~~~~~V~~~~~s~d~--~~l~~s~dg~v~lWd~~~~~~~~~-----------~~~~~~~h~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 92 QTEAGVTDVAWVSEK--GILVASDSGAVELWEILEKESLLV-----------NKFAKYEHDDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp ECSSCEEEEEEETTT--EEEEEETTSCEEEC--------CC-----------CCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCCCEEEEEEcCCC--CEEEEECCCEEEEeeccccceeEE-----------EeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence 378899999999987 456778899999999988763211 111225789999999999999999987
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCC-EEEEeccCceEEEEeccCCeeEEE
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|+.|++||+.++ +.+..+.+|... |.+++| ++++. ++++++.||.|++||+++++++..
T Consensus 159 ~dg~v~iwd~~~~----------------~~~~~~~~h~~~--v~~v~~-s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~ 219 (357)
T 4g56_B 159 KDFSVKVWDLSQK----------------AVLKSYNAHSSE--VNCVAA-CPGKDTIFLSCGEDGRILLWDTRKPKPATR 219 (357)
T ss_dssp TTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTCSSCEEEEETTSCEEECCTTSSSCBCB
T ss_pred CCCeEEEEECCCC----------------cEEEEEcCCCCC--EEEEEE-ccCCCceeeeeccCCceEEEECCCCceeee
Confidence 5999999999987 788888899866 999999 78764 789999999999999999887765
Q ss_pred ee--cCccceEEEEEcCCC-CeEEEEeCCCcEEEccCCCCC-CCCCCCChhhhhhhhccCCC-CceeEEecCCceEEEEE
Q 021484 186 MV--GDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGRE-DHSRITLTPDVIMHVLR 260 (312)
Q Consensus 186 ~~--~~~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~i~~ 260 (312)
+. .|...+.+++|+|++ .+|++++.|+.|++||+++++ ...+..+...+... .++++ ..++++++.|+.|++||
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l-~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL-AYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE-EECSSSSCCEEEEETTSCEEEEC
T ss_pred eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE-EEcCCCCCEEEEEeCCCEEEEEE
Confidence 54 466789999999985 568899999999999998876 35566677666444 46665 46889999999999999
Q ss_pred ecccCcc--------ce-eEeec-CCCccCCCCCCCeEEEeecCCCC
Q 021484 261 LQRRQTL--------AY-RERRY-NAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 261 ~~~~~~~--------~~-~~~~~-~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
++..... +. ..+.| +...+++...++.|++|++....
T Consensus 299 ~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 299 ADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp TTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 8764322 11 25666 56778888888899999985543
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.5e-33 Score=252.09 Aligned_cols=217 Identities=15% Similarity=0.256 Sum_probs=175.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+ .+|...|++++|+|++ ++||+|+.|++|++||+.+++. ..
T Consensus 41 v~l~~~~~~~~~~~~-----------~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~-------------~~ 95 (611)
T 1nr0_A 41 VYTVPVGSLTDTEIY-----------TEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTH-------------IL 95 (611)
T ss_dssp EEEEETTCSSCCEEE-----------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTC-------------CE
T ss_pred EEEecCCCcccCeEe-----------cCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcc-------------ee
Confidence 457777654433333 2488999999999999 8999999999999999975531 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEec-C----CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISYN-D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
...+..|...|.+++|+|++++|++++ + +.|++||. + .....+.+|... |.+++|
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~----------------~~~~~l~gh~~~--v~~v~f 155 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--G----------------TSNGNLTGQARA--MNSVDF 155 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--C----------------CBCBCCCCCSSC--EEEEEE
T ss_pred eEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--C----------------CCcceecCCCCC--ceEEEE
Confidence 222367899999999999999888754 3 36788874 3 455667888866 999999
Q ss_pred ecCCCC-EEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCC-----
Q 021484 156 FGPNDE-YVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP----- 228 (312)
Q Consensus 156 ~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~----- 228 (312)
+|++. .|++|+.|++|++||..+++++..+.+|...|.+++|+|++++|++++.|++|++||+.+++. ..+.
T Consensus 156 -~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~ 234 (611)
T 1nr0_A 156 -KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 234 (611)
T ss_dssp -CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred -CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccccc
Confidence 89987 599999999999999999999999999999999999999999999999999999999887653 2221
Q ss_pred --CChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 229 --DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 229 --~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+|...+. ...+++++.++++++.|+.+++||+...
T Consensus 235 ~~~h~~~V~-~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 235 NVAHSGSVF-GLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp SCSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ccccCCCEE-EEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4666664 4457889999999999999999997643
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-33 Score=234.72 Aligned_cols=241 Identities=10% Similarity=0.117 Sum_probs=196.8
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.||..+|++++|+|++ .+|++|+.||+|++||..+++. ...+ ..|...|.+++|+|++.+|+++
T Consensus 61 ~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~--------------~~~~-~~~~~~v~~~~~sp~g~~lasg 124 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNK--------------EHAV-TMPCTWVMACAYAPSGCAIACG 124 (354)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE--------------EEEE-ECSSSCCCEEEECTTSSEEEEE
T ss_pred cCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCc--------------ceEE-ecCCCCEEEEEECCCCCEEEEe
Confidence 4799999999999998 8999999999999999987752 2222 5577889999999999999997
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|+.+++|++...... ........+.+|... |.+++| +|++..|++++.|++|++||+.+++++..
T Consensus 125 ~~d~~i~v~~~~~~~~~----------~~~~~~~~~~~h~~~--v~~~~~-~~~~~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNE----------NMAAKKKSVAMHTNY--LSACSF-TNSDMQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp STTSEEEEEECCCCTTC----------CSGGGCEEEEECSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eCCCCEEEEEEeccccc----------cccccceeeeccCCc--EEEEEE-eCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 5999999998653110 001344567788866 999999 99999999999999999999999999999
Q ss_pred eecCccceEEEEEcC--CCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 186 MVGDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
+.+|...|.+++|+| ++++|++++.|++|++||++++.. ..+..|...+. ...+++++.++++++.|+.+++||++
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN-SVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999988 467999999999999999998764 45566666664 44578889999999999999999986
Q ss_pred ccCcc------------ceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 263 RRQTL------------AYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 263 ~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..... ....+.+++..+.+...++.+.+||...+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 54211 122567778888888888889999986654
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.1e-33 Score=229.82 Aligned_cols=219 Identities=15% Similarity=0.248 Sum_probs=179.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|.+++|+|++ ++|++++.|+.|++||+.++++ .
T Consensus 47 i~iw~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~--------------~ 100 (312)
T 4ery_A 47 IKIWGAYDGKFEKTIS-----------GHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKC--------------L 100 (312)
T ss_dssp EEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE--------------E
T ss_pred EEEEeCCCcccchhhc-----------cCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCcE--------------E
Confidence 5788887665433332 378899999999998 8999999999999999998762 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ .+|...|.+++|+|++++|+++ .|+.|++||++++ +....+..|... |.+++| +|+
T Consensus 101 ~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~ 160 (312)
T 4ery_A 101 KTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG----------------KCLKTLPAHSDP--VSAVHF-NRD 160 (312)
T ss_dssp EEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----------------CEEEEECCCSSC--EEEEEE-CTT
T ss_pred EEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----------------EEEEEecCCCCc--EEEEEE-cCC
Confidence 222 6789999999999999999987 5999999999887 677788888866 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEee-cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhh--
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIM-- 235 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~-- 235 (312)
+++|++++.||.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+++++. ..+.++.....
T Consensus 161 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 161 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 240 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCC
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEE
Confidence 9999999999999999999998887764 4567899999999999999999999999999988753 33444433321
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
......+++.++++++.|+.+++|++....
T Consensus 241 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp CEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 222233567899999999999999987653
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.9e-33 Score=227.95 Aligned_cols=236 Identities=14% Similarity=0.158 Sum_probs=187.2
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC--CCeEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLI 104 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 104 (312)
.+|...|++++|+|++ ++|++|+.|++|++||+..... .....+.+|...|.+++|+|+ +++|+
T Consensus 6 ~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-------------KLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp CSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-------------CCCEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred cCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-------------EEEEEEccccCCeEEEEecCCCcCCEEE
Confidence 4699999999999999 8999999999999999975321 112223789999999999864 78899
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC--CCEEEEeccCceEEEEeccCCe
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~--~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
++ .|++|++||+.++. ......+.+|... |.+++| +|+ +.+|++++.|+.|++||++++.
T Consensus 72 s~s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGR--------------WSQIAVHAVHSAS--VNSVQW-APHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEETTTEEEEEEBSSSC--------------BCCCEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred EEcCCCEEEEEEcCCCc--------------eEEEEEeecCCCc--eeEEEe-CcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 87 59999999998751 0244566778766 999999 887 8899999999999999998753
Q ss_pred --eEEEeecCccceEEEEEcCC-------------CCeEEEEeCCCcEEEccCCCCC-----CCCCCCChhhhhhhhccC
Q 021484 182 --LVRLMVGDRHVVNQLEPHPH-------------IPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQG 241 (312)
Q Consensus 182 --~~~~~~~~~~~v~~~~~~p~-------------~~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~ 241 (312)
....+.+|...|.+++|+|+ +++|++++.|++|++||+++.. ...+.+|...+.... ++
T Consensus 135 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~-~s 213 (297)
T 2pm7_B 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA-WS 213 (297)
T ss_dssp CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-EC
T ss_pred ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEE-EC
Confidence 24567789999999999997 4689999999999999988754 245667777775444 66
Q ss_pred CC---CceeEEecCCceEEEEEecccC--------------ccce-eEeecCCCccCCCCCCCeEEEeecC
Q 021484 242 RE---DHSRITLTPDVIMHVLRLQRRQ--------------TLAY-RERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 242 ~~---~~~l~s~~~d~~i~i~~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
++ +.++++++.|+.+++|++.... ..++ ..+.|++..+++...++.|.+|+..
T Consensus 214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 65 4899999999999999986531 1111 2667788888888888889998864
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-32 Score=225.49 Aligned_cols=223 Identities=11% Similarity=0.149 Sum_probs=172.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|+|||+.......+... .+|..+|++++|+|. + ++|++|+.|++|++||+.+++..
T Consensus 33 v~iw~~~~~~~~~~~~l---------~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~------------ 90 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWS------------ 90 (297)
T ss_dssp EEEEEBCSSCBCCCEEE---------CCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBC------------
T ss_pred EEEEecCCCCcEEEEEE---------ccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceE------------
Confidence 57888764322222221 358999999999864 5 79999999999999999876421
Q ss_pred cccccccCCCccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
....+..|...|.+++|+|+ +.+|+++ .|+.|++||+++.. ......+.+|... |.+++|
T Consensus 91 -~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~--------------~~~~~~~~~h~~~--v~~~~~ 153 (297)
T 2pm7_B 91 -QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW 153 (297)
T ss_dssp -CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS--------------CBCCEEEECCSSC--EEEEEE
T ss_pred -EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC--------------ceeeeeeecccCc--cceEee
Confidence 11122678999999999997 7888886 59999999997641 0123566788866 999999
Q ss_pred ecCC-------------CCEEEEeccCceEEEEeccCCe----eEEEeecCccceEEEEEcCCC---CeEEEEeCCCcEE
Q 021484 156 FGPN-------------DEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPHI---PMFATCGIEKTVK 215 (312)
Q Consensus 156 ~s~~-------------~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~~---~~l~t~~~d~~i~ 215 (312)
+|+ +++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|++|+
T Consensus 154 -~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 154 -APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp -CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred -cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 786 5799999999999999998765 567788999999999999985 7899999999999
Q ss_pred EccCCCCCC----CCC--CCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 216 LWAPMPTDF----PPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 216 iwd~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+||++.... ..+ ..+...+ ....+++++.+|++++.|+.+++|+....
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCE-EEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EEEeCCCCCccceeeeecccCCCcE-EEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 999876421 112 2344444 34457889999999999999999997643
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-33 Score=230.16 Aligned_cols=240 Identities=15% Similarity=0.228 Sum_probs=178.0
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccccccc-ccCCCccEEEEEEccCCCeEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
+|..+|.+++|+|+ +|++|+.|++|++||+..+... ....+ ..+|...|.+++|+|++++|+++
T Consensus 12 ~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~------------~~~~~~~~~h~~~v~~v~~sp~~~~las~ 76 (330)
T 2hes_X 12 LYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT------------LIDVLDETAHKKAIRSVAWRPHTSLLAAG 76 (330)
T ss_dssp CCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE------------EEEEECTTCCCSCEEEEEECTTSSEEEEE
T ss_pred cCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE------------EEEEEecCCccCCEEEEEECCCCCEEEEE
Confidence 58999999999985 8999999999999999865310 11112 13489999999999999999997
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccC----Ce
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG----GK 181 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~----~~ 181 (312)
.|+.|++||+..... .....+....+.+|... |.+++| +|++++|++|+.|+.|++||++. .+
T Consensus 77 s~D~~v~iw~~~~~~~---------~~~~~~~~~~~~~h~~~--V~~v~~-sp~g~~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 77 SFDSTVSIWAKEESAD---------RTFEMDLLAIIEGHENE--VKGVAW-SNDGYYLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp ETTSCEEEEEC----------------CCCEEEEEEC----C--EEEEEE-CTTSCEEEEEETTSCEEEEECCTTCCCCE
T ss_pred eCCCcEEEEEcccCcC---------ccccceeEEEEcCCCCc--EEEEEE-CCCCCEEEEEeCCCEEEEEeccCCCCCeE
Confidence 599999999864210 00011345667888866 999999 99999999999999999999943 35
Q ss_pred eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCC---CCCCCCCChhhhhhhhccCCC--CceeEEecCCceE
Q 021484 182 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT---DFPPLPDNAEKIMKANKQGRE--DHSRITLTPDVIM 256 (312)
Q Consensus 182 ~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i 256 (312)
++..+.+|...|.+++|+|++.+|++++.|++|++||...+ .+..+.+|...+.... ++++ +..+++++.|+.+
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD-FDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE-ECCSSSSCEEEEEETTSCE
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE-ecCCCCeeEEEEEeCCCeE
Confidence 67788899999999999999999999999999999998765 2455667777765444 5665 5689999999999
Q ss_pred EEEEecccCc------------------ccee-EeecCCCccCCCCCCCeEEEeecCCC
Q 021484 257 HVLRLQRRQT------------------LAYR-ERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 257 ~i~~~~~~~~------------------~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
++|++..... .++. .+.+ ...+.+...++.|.+++..++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TSCEEEEETTSCEEEEEEETT
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcC-CCEEEEEeCCCEEEEEEcCCC
Confidence 9999865311 1111 2332 235666667778888886544
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.3e-33 Score=249.99 Aligned_cols=273 Identities=10% Similarity=0.061 Sum_probs=201.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||.++.+....+ .+|...|++++|+|++ ++|++|+.|++|++||+.+++...... ..
T Consensus 172 v~lwd~~~~~~~~~l-----------~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~--------~~ 231 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTF-----------GEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFE--------DD 231 (611)
T ss_dssp EEEEETTTBEEEEEE-----------CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECB--------CT
T ss_pred EEEEECCCCeEeeee-----------ccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeec--------cc
Confidence 467887654432222 2489999999999998 899999999999999998876322110 00
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCC---------------------------CCCcCCcccc
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGP---------------------------SPLSLSPEDL 132 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~---------------------------~~~~~~~~~~ 132 (312)
.....+|...|.+++|+|++++|+++ .|++|++||+.++... .+..+..|+.
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~ 311 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 311 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence 00112799999999999999999997 5999999999865310 0112223333
Q ss_pred cCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe-e------------------------
Q 021484 133 QKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-V------------------------ 187 (312)
Q Consensus 133 ~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~------------------------ 187 (312)
........+.+|... |.+++| +|++++|++++.|+.|++||+.+++....+ .
T Consensus 312 ~~~~~~~~~~gh~~~--v~~l~~-spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~ 388 (611)
T 1nr0_A 312 ELGSIDQVRYGHNKA--ITALSS-SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDD 388 (611)
T ss_dssp TTTEEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTT
T ss_pred CCCCcceEEcCCCCC--EEEEEE-eCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCC
Confidence 333444566788866 999999 999999999999999999998776543221 0
Q ss_pred ---------------------------------------------------------cCccceEEEEEcCCCCeEEEEeC
Q 021484 188 ---------------------------------------------------------GDRHVVNQLEPHPHIPMFATCGI 210 (312)
Q Consensus 188 ---------------------------------------------------------~~~~~v~~~~~~p~~~~l~t~~~ 210 (312)
.|...+.+++|+|++++|++++.
T Consensus 389 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~ 468 (611)
T 1nr0_A 389 HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ 468 (611)
T ss_dssp EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred ceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCC
Confidence 02234678999999999999999
Q ss_pred CCcEEEccCCCCCCC--CCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecc-cC-----------ccce-eEeecC
Q 021484 211 EKTVKLWAPMPTDFP--PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR-RQ-----------TLAY-RERRYN 275 (312)
Q Consensus 211 d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~-~~-----------~~~~-~~~~~~ 275 (312)
|++|++||+.++... ...+|...+ ....+++++.++++++.|+.+++|++.. .. ..+. ..++|+
T Consensus 469 D~~v~lwd~~~~~~~~~~~~~h~~~v-~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspd 547 (611)
T 1nr0_A 469 DSKVHVYKLSGASVSEVKTIVHPAEI-TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 547 (611)
T ss_dssp TSEEEEEEEETTEEEEEEEEECSSCE-EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT
T ss_pred CCeEEEEEccCCceeeeeccCCCCce-EEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCC
Confidence 999999999875431 113455555 4456889999999999999999999875 11 1112 278899
Q ss_pred CCccCCCCCCCeEEEeecCCCC
Q 021484 276 AADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 276 ~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
+..+++...++.|.+|++..+.
T Consensus 548 g~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 548 NVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp SSEEEEEETTSCEEEEETTCTT
T ss_pred CCEEEEEECCCcEEEEECCCcc
Confidence 9999999899999999997655
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.6e-33 Score=236.51 Aligned_cols=228 Identities=16% Similarity=0.269 Sum_probs=175.9
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 108 (312)
...|++++|+|++ ++|++|+.|+.|++||+.++++ ... +.+|...|.+++|+|++.+|+++ .|
T Consensus 123 ~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~~--------------~~~-~~~h~~~v~~~~~~p~~~~l~s~s~d 186 (393)
T 1erj_A 123 DLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKI--------------VMI-LQGHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp CCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------------EEE-ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcE--------------EEE-EccCCCCEEEEEEcCCCCEEEEecCC
Confidence 4459999999999 8999999999999999998762 222 37899999999999999988886 59
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEe-
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM- 186 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~- 186 (312)
+.|++||+.++ +....+. +... +.+++| +| ++++|++|+.|+.|++||+++++.+..+
T Consensus 187 ~~v~iwd~~~~----------------~~~~~~~-~~~~--v~~~~~-~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~ 246 (393)
T 1erj_A 187 RTVRIWDLRTG----------------QCSLTLS-IEDG--VTTVAV-SPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp SEEEEEETTTT----------------EEEEEEE-CSSC--EEEEEE-CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CcEEEEECCCC----------------eeEEEEE-cCCC--cEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcEEEeec
Confidence 99999999887 4555554 3333 899999 77 8999999999999999999999887776
Q ss_pred ------ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-------------CCCCCChhhhhhhhccCCCCcee
Q 021484 187 ------VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-------------PPLPDNAEKIMKANKQGREDHSR 247 (312)
Q Consensus 187 ------~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l 247 (312)
.+|...|.+++|+|++++|++++.|++|++||++.... ..+.+|...+. ...+++++.++
T Consensus 247 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l 325 (393)
T 1erj_A 247 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL-SVATTQNDEYI 325 (393)
T ss_dssp ------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEE-EEEECGGGCEE
T ss_pred ccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEE-EEEECCCCCEE
Confidence 57889999999999999999999999999999876432 12234444443 34467788899
Q ss_pred EEecCCceEEEEEecccCcccee----------Eee------cCCCccCCCCCCCeEEEeecC
Q 021484 248 ITLTPDVIMHVLRLQRRQTLAYR----------ERR------YNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 248 ~s~~~d~~i~i~~~~~~~~~~~~----------~~~------~~~~~~~~~~~~~~v~~~~~~ 294 (312)
++++.|+.+++||+......... .+. |+...++++..++.+.+|++.
T Consensus 326 ~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 326 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 99999999999998765432111 111 233445566666667777653
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.8e-33 Score=230.27 Aligned_cols=236 Identities=14% Similarity=0.188 Sum_probs=187.4
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.||.++|++++|+|+++++|++|+.|++|++|++...... .. .+...+.+|...|.+++|+|++++|+++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~---------~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK---------FG-VPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE---------EE-EEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc---------cc-ccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 3699999999999977689999999999999998753210 00 1122237899999999999999999997
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|++|++||+.++ +....+.+|... |.+++| +|++++|++|+.|+.|++||++ ++++..
T Consensus 84 s~D~~v~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~s~s~D~~i~vwd~~-~~~~~~ 143 (319)
T 3frx_A 84 SWDKTLRLWDVATG----------------ETYQRFVGHKSD--VMSVDI-DKKASMIISGSRDKTIKVWTIK-GQCLAT 143 (319)
T ss_dssp ETTSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSCEEEEEETTSCEEEEETT-SCEEEE
T ss_pred eCCCEEEEEECCCC----------------CeeEEEccCCCc--EEEEEE-cCCCCEEEEEeCCCeEEEEECC-CCeEEE
Confidence 5999999999988 778889999976 999999 9999999999999999999997 567788
Q ss_pred eecCccceEEEEEcCCC------CeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEE
Q 021484 186 MVGDRHVVNQLEPHPHI------PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHV 258 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~------~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 258 (312)
+.+|...|.++.|+|.. ..+++++.|++|++||++.... ..+.+|...+. ...+++++.++++++.|+.+++
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNIN-TLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEE-EEEECTTSSEEEEEETTCEEEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEE-EEEEcCCCCEEEEEeCCCeEEE
Confidence 88999999999999954 4799999999999999987753 44556766664 4457889999999999999999
Q ss_pred EEecccCccc---------eeEeecCCCccCCCCCCCeEEEeecC
Q 021484 259 LRLQRRQTLA---------YRERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 259 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
||+....... -..+.|++..+....++ .+.+++++
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEET
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeC
Confidence 9987653221 12455665555544332 35555543
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-32 Score=234.77 Aligned_cols=217 Identities=15% Similarity=0.218 Sum_probs=174.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+ .+|...|++++|+|++ .+|++++.|++|++||++++++.
T Consensus 147 i~iwd~~~~~~~~~~-----------~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~-------------- 200 (393)
T 1erj_A 147 IRIWDIENRKIVMIL-----------QGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCS-------------- 200 (393)
T ss_dssp EEEEETTTTEEEEEE-----------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE--------------
T ss_pred EEEEECCCCcEEEEE-----------ccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeE--------------
Confidence 578998876533332 2488899999999998 79999999999999999988732
Q ss_pred cccccCCCccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE-------ecccCCceee
Q 021484 81 RHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-------SGHRNSQTVK 151 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~ 151 (312)
.. ..+...+.+++|+| ++++|+++ .|+.|++||+.++ ..+..+ .+|... |.
T Consensus 201 ~~--~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~----------------~~~~~~~~~~~~~~~h~~~--v~ 260 (393)
T 1erj_A 201 LT--LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG----------------FLVERLDSENESGTGHKDS--VY 260 (393)
T ss_dssp EE--EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC----------------CEEEEEC------CCCSSC--EE
T ss_pred EE--EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC----------------cEEEeecccccCCCCCCCC--EE
Confidence 11 12456799999999 88888887 5999999999876 344443 456655 99
Q ss_pred EEEEecCCCCEEEEeccCceEEEEeccCC------------eeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccC
Q 021484 152 GVNFFGPNDEYVMSGSDCGHLFIWKKKGG------------KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 219 (312)
Q Consensus 152 ~v~~~s~~~~~l~~~~~dg~v~iwd~~~~------------~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~ 219 (312)
+++| +|++++|++|+.|+.|++||+++. .+...+.+|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 261 ~v~~-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 261 SVVF-TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEE-CTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEE-CCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 9999 999999999999999999998753 345677889999999999999999999999999999999
Q ss_pred CCCCC-CCCCCChhhhhhhhcc-----CCCCceeEEecCCceEEEEEeccc
Q 021484 220 MPTDF-PPLPDNAEKIMKANKQ-----GREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 220 ~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.++.. ..+.+|...+....+. .+++.++++++.|+.+++|++...
T Consensus 340 ~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 340 KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 88764 5566777776554432 246789999999999999998654
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.6e-32 Score=224.92 Aligned_cols=252 Identities=10% Similarity=0.073 Sum_probs=197.2
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+......+..... .+|...|.+++|+|++ ++|++++.|+.|++||+.+++. ..
T Consensus 74 i~iw~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~-------------~~ 133 (337)
T 1gxr_A 74 VKVWDISHPGNKSPVSQLDC------LNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP-------------RI 133 (337)
T ss_dssp EEEEETTSTTCCSCSEEEEC------SCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC---------------EE
T ss_pred EEEEECCCCCceeeeecccc------cCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc-------------ce
Confidence 57899887653333222111 1378899999999998 8999999999999999987651 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+..|...|.+++|+|++++++++ .|+.|++||+.++ +....+..|... +.+++| +|+
T Consensus 134 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~ 194 (337)
T 1gxr_A 134 KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ----------------TLVRQFQGHTDG--ASCIDI-SND 194 (337)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTT
T ss_pred eeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------------ceeeeeecccCc--eEEEEE-CCC
Confidence 22236788899999999999988886 6999999999887 677788888866 999999 999
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhc
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANK 239 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 239 (312)
+++|++++.||.|++||+++++.+..+. +...+.+++|+|+++++++++.|+.|++||+.+.+...+..|...+. ...
T Consensus 195 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~-~~~ 272 (337)
T 1gxr_A 195 GTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL-SLK 272 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEE-EEE
T ss_pred CCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCcccee-EEE
Confidence 9999999999999999999999887775 67889999999999999999999999999999887666666666554 445
Q ss_pred cCCCCceeEEecCCceEEEEEecccCccce---------eEeecCCCccCCCCCCCeEEEeec
Q 021484 240 QGREDHSRITLTPDVIMHVLRLQRRQTLAY---------RERRYNAADFESDEEEGETYLLGF 293 (312)
Q Consensus 240 ~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~ 293 (312)
+++++.++++++.|+.+++|++........ ..+.+++..+.+...++.+.++++
T Consensus 273 ~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 273 FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 788899999999999999999876543311 134445555555555555555553
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.9e-32 Score=226.99 Aligned_cols=239 Identities=14% Similarity=0.168 Sum_probs=186.0
Q ss_pred CCccceEEEEE-----cC-CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC
Q 021484 28 MNSIRLNAIVI-----DP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE 101 (312)
Q Consensus 28 ~h~~~v~~~~~-----~p-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 101 (312)
||...|++++| ++ ++ .+|++|+.|++|++||+.+.+.... ...+...+.+|...|.+++|+|++.
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~~--------~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNGY--------FGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSSB--------SEEEEEEECCCSSCEEEEEECSSTT
T ss_pred cchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCcccc--------cccccchhccCCCceEEEEECCCCC
Confidence 69999999999 77 66 8999999999999999976531100 0012223478999999999999999
Q ss_pred eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC
Q 021484 102 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 180 (312)
Q Consensus 102 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~ 180 (312)
+++++ .|+.|++||+.++ +....+.+|... |.+++| +|++++|++++.|+.|++||+..
T Consensus 90 ~l~s~s~D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~~~d~~i~~wd~~~- 149 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTG----------------TTYKRFVGHQSE--VYSVAF-SPDNRQILSAGAEREIKLWNILG- 149 (343)
T ss_dssp EEEEEETTSEEEEEETTSS----------------CEEEEEECCCSC--EEEEEE-CSSTTEEEEEETTSCEEEEESSS-
T ss_pred EEEEEcCCCcEEEEECCCC----------------cEEEEEcCCCCc--EEEEEE-CCCCCEEEEEcCCCEEEEEeccC-
Confidence 99987 5999999999987 678889999876 999999 99999999999999999999984
Q ss_pred eeEEEee---cCccceEEEEEcCCC----------CeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCcee
Q 021484 181 KLVRLMV---GDRHVVNQLEPHPHI----------PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSR 247 (312)
Q Consensus 181 ~~~~~~~---~~~~~v~~~~~~p~~----------~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (312)
+...... .|...|.+++|+|++ .+|++++.|++|++||........+.+|...+. ...+++++.++
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~-~~~~s~~g~~l 228 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVN-HLSISPNGKYI 228 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEE-EEEECTTSSEE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccce-EEEECCCCCEE
Confidence 3333443 688899999999987 689999999999999965544445556666654 44578899999
Q ss_pred EEecCCceEEEEEecccCcc----------ceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 248 ITLTPDVIMHVLRLQRRQTL----------AYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 248 ~s~~~d~~i~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
++++.|+.+++||+...... ....+.|+...+... .++.+.+++...+.
T Consensus 229 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 229 ATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQS 287 (343)
T ss_dssp EEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCC
T ss_pred EEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCC
Confidence 99999999999998432211 112556666555544 34458888876543
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-32 Score=231.83 Aligned_cols=210 Identities=14% Similarity=0.214 Sum_probs=172.7
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLIS 105 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s 105 (312)
.+|...|.++.|+|+++..|++|+.|++|++||+.+++.... + ......+|...|.+++|++ ++.+|++
T Consensus 154 ~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~---------~-~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 154 TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI---------F-GSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE---------E-CCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE---------e-ecccCCCCccCeEEEEeecCCCCEEEE
Confidence 579999999999998667899999999999999998863211 1 1112257889999999987 6788888
Q ss_pred e-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE
Q 021484 106 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 184 (312)
Q Consensus 106 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 184 (312)
+ .|+.|++||++... +....+.+|... |.+++| +|++++|++|+.||+|++||+++++.+.
T Consensus 224 gs~D~~v~~wd~~~~~---------------~~~~~~~~h~~~--v~~v~~-~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITS---------------RAVRTYHGHEGD--INSVKF-FPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp EETTSCEEEEETTTTC---------------CCCEEECCCSSC--CCEEEE-CTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred EECCCeEEEEECCCCC---------------cceEEECCcCCC--eEEEEE-ecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 7 59999999997431 567788899876 999999 9999999999999999999999999988
Q ss_pred EeecCc-------cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-C---CC-CCChhhhhhhhccCCCCceeEEecC
Q 021484 185 LMVGDR-------HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-P---PL-PDNAEKIMKANKQGREDHSRITLTP 252 (312)
Q Consensus 185 ~~~~~~-------~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~---~~-~~~~~~~~~~~~~~~~~~~l~s~~~ 252 (312)
.+..+. ..|++++|+|++++|++|+.||.|++||+..++. . .+ .+|...+ ....+++++.++++++.
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI-SCLGLSSDGSALCTGSW 364 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC-CEEEECSSSSEEEEECT
T ss_pred EecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce-EEEEECCCCCEEEEeeC
Confidence 876543 2489999999999999999999999999887653 1 22 3455555 55568899999999999
Q ss_pred CceEEEEEecccC
Q 021484 253 DVIMHVLRLQRRQ 265 (312)
Q Consensus 253 d~~i~i~~~~~~~ 265 (312)
|+.+++|++....
T Consensus 365 D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 365 DKNLKIWAFSGHR 377 (380)
T ss_dssp TSCEEEEECCSSS
T ss_pred CCCEEEEecCCCc
Confidence 9999999987653
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.7e-33 Score=231.17 Aligned_cols=236 Identities=16% Similarity=0.192 Sum_probs=183.4
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc--CCCeEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLI 104 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~ 104 (312)
.+|..+|++++|+|++ ++|++|+.|++|++||+.+++. .....+.+|...|.+++|+| ++++|+
T Consensus 10 ~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~-------------~~~~~l~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQ-------------ILIADLRGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ----CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEE-------------EEEEEEECCSSCEEEEEECCGGGSSCEE
T ss_pred ccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCc-------------EEEEEEcCCCccEEEEEeCCCCCCCEEE
Confidence 3699999999999998 8999999999999999987641 11122378999999999986 378888
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC--CCEEEEeccCceEEEEeccCCe
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~--~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
++ .|++|++||++++. ......+.+|... |.+++| +|+ +.+|++|+.|+.|++||++.+.
T Consensus 76 s~s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGT--------------WEKSHEHAGHDSS--VNSVCW-APHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp EEETTSCEEEECCSSSC--------------CCEEEEECCCSSC--CCEEEE-CCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred EEECCCEEEEEECCCCc--------------ceEEEEccCCCCc--eEEEEE-CCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 86 59999999998751 0234456678766 999999 887 7899999999999999998753
Q ss_pred e---EEEeecCccceEEEEEcCC-----------------CCeEEEEeCCCcEEEccCCCC----CCCCCCCChhhhhhh
Q 021484 182 L---VRLMVGDRHVVNQLEPHPH-----------------IPMFATCGIEKTVKLWAPMPT----DFPPLPDNAEKIMKA 237 (312)
Q Consensus 182 ~---~~~~~~~~~~v~~~~~~p~-----------------~~~l~t~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~ 237 (312)
. ...+.+|...|.+++|+|+ +++|++++.|++|++||++.. ....+.+|...+...
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence 2 3445678899999999997 468999999999999999754 235667777776544
Q ss_pred hccCCCC----ceeEEecCCceEEEEEecccC-------------ccce-eEeecCCCccCCCCCCCeEEEeecC
Q 021484 238 NKQGRED----HSRITLTPDVIMHVLRLQRRQ-------------TLAY-RERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 238 ~~~~~~~----~~l~s~~~d~~i~i~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
.+++++ .++++++.|+.+++|++.... ..++ ..+.|++..+++...++.|.+|+..
T Consensus 219 -~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 219 -AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp -ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred -EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 466654 789999999999999986521 1112 2667888888888888889999864
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.9e-32 Score=235.38 Aligned_cols=219 Identities=11% Similarity=0.123 Sum_probs=173.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+ .+|...|++++|+|++ .+|++|+.|+.|++||+.+++ ..
T Consensus 121 i~iwd~~~~~~~~~~-----------~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~--------------~~ 174 (420)
T 3vl1_A 121 IKVLDSNFNLQREID-----------QAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS--------------NP 174 (420)
T ss_dssp EEEECTTSCEEEEET-----------TSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------CC
T ss_pred EEEEeCCCcceeeec-----------ccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc--------------Cc
Confidence 578888765432221 2488999999999998 799999999999999999876 22
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc---CC---------
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---NS--------- 147 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------- 147 (312)
..+ .+|...|.+++|+|++++|+++ .|+.|++||+.++ +....+..+. ..
T Consensus 175 ~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 175 RTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG----------------TTIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp EEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT----------------EEEEEECBTTBTTCCEEEEEEEEC
T ss_pred eEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC----------------ceeEEeecCCCCCCCccEEEEecC
Confidence 222 6899999999999999988886 5999999999877 4555554321 11
Q ss_pred ----------ceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee-cCccceEEEEEcCCCC-eEEEEeCCCcEE
Q 021484 148 ----------QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIP-MFATCGIEKTVK 215 (312)
Q Consensus 148 ----------~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~-~l~t~~~d~~i~ 215 (312)
..+.+++| +|++++|++++.||.|++||+++++.+..+. .|...|.+++|+|+++ +|++++.||.|+
T Consensus 238 ~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~ 316 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEF-GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLA 316 (420)
T ss_dssp CCSSCGGGCCCCCCTTCS-SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CcceeeecccCcccceEE-cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEE
Confidence 22566666 8999999999999999999999988877764 5788999999999999 999999999999
Q ss_pred EccCCCCC--CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 216 LWAPMPTD--FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 216 iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+||++++. +..+..+....+...++ +++.++++++.|+.+++|++...
T Consensus 317 vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 317 QWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred EEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 99998864 34444444444455433 46789999999999999998764
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.1e-32 Score=235.43 Aligned_cols=204 Identities=14% Similarity=0.147 Sum_probs=164.8
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~ 106 (312)
+|..+|++++|+|.++++||+|+.||.|+|||+.+++.. ......+|...|++++|+| ++.+|+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-------------~~~~~~gH~~~V~~l~f~p~~~~~l~s~ 183 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-------------TFIKGIGAGGSITGLKFNPLNTNQFYAS 183 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-------------EEECCCSSSCCCCEEEECSSCTTEEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-------------eEEEccCCCCCEEEEEEeCCCCCEEEEE
Confidence 477889999999977689999999999999999876521 1112268999999999998 57888887
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 184 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 184 (312)
.|++|++||+++. ....+. .+.....+.+++| ++++++|++|+.||.|++||++ ++.+.
T Consensus 184 s~D~~v~iwd~~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~dg~i~~wd~~-~~~~~ 244 (435)
T 4e54_B 184 SMEGTTRLQDFKGN-----------------ILRVFASSDTINIWFCSLDV-SASSRMVVTGDNVGNVILLNMD-GKELW 244 (435)
T ss_dssp CSSSCEEEEETTSC-----------------EEEEEECCSSCSCCCCCEEE-ETTTTEEEEECSSSBEEEEESS-SCBCC
T ss_pred eCCCEEEEeeccCC-----------------ceeEEeccCCCCccEEEEEE-CCCCCEEEEEeCCCcEeeeccC-cceeE
Confidence 5999999999765 333333 3333334789999 8999999999999999999997 56677
Q ss_pred EeecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCCCC----CCCCCChhhhhhhhccCCCCceeEEecCCceEEEE
Q 021484 185 LMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTDF----PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 259 (312)
Q Consensus 185 ~~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~ 259 (312)
.+.+|...|++++|+|++. ++++++.|++|++||++.... ....+|...+ ....+++++.+|++++.|+.|++|
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v-~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPV-NAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCE-EECCBCTTSSEEEEEESSSCEEEE
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccc-cceeECCCCCeeEEEcCCCEEEEE
Confidence 8889999999999999987 588999999999999987652 2223455555 445578899999999999999999
Q ss_pred Eeccc
Q 021484 260 RLQRR 264 (312)
Q Consensus 260 ~~~~~ 264 (312)
++...
T Consensus 324 d~~~~ 328 (435)
T 4e54_B 324 SASQW 328 (435)
T ss_dssp ESSSS
T ss_pred ECCCC
Confidence 98764
No 37
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-32 Score=227.97 Aligned_cols=224 Identities=13% Similarity=0.131 Sum_probs=171.4
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|+|||+++.....+... .+|..+|++++|+|. + ++|++|+.|++|++||+++++.
T Consensus 37 v~lwd~~~~~~~~~~~l---------~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~------------- 93 (316)
T 3bg1_A 37 VKIFDVRNGGQILIADL---------RGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTW------------- 93 (316)
T ss_dssp EEEEEEETTEEEEEEEE---------ECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCC-------------
T ss_pred EEEEEecCCCcEEEEEE---------cCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcc-------------
Confidence 58999876543222222 248999999999863 5 7999999999999999987641
Q ss_pred cccccccCCCccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
.....+.+|...|.+++|+|+ +.+|+++ .|+.|++||+.... .......+.+|... +.+++|
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~ 158 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG-------------QWEVKKINNAHTIG--CNAVSW 158 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS-------------CEEECCBTTSSSSC--BCCCEE
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC-------------CcceeeeeccccCC--cceEEE
Confidence 111123678999999999998 6788887 59999999997641 00113344567655 899999
Q ss_pred ecCC-----------------CCEEEEeccCceEEEEeccCC---eeEEEeecCccceEEEEEcCCC----CeEEEEeCC
Q 021484 156 FGPN-----------------DEYVMSGSDCGHLFIWKKKGG---KLVRLMVGDRHVVNQLEPHPHI----PMFATCGIE 211 (312)
Q Consensus 156 ~s~~-----------------~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~p~~----~~l~t~~~d 211 (312)
+|+ +++|++|+.|+.|++||++.. +++..+.+|...|.+++|+|++ .+|++++.|
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 159 -APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp -CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred -ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 776 478999999999999999755 4677788999999999999987 789999999
Q ss_pred CcEEEccCCCCC-----CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 212 KTVKLWAPMPTD-----FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 212 ~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
++|++|++.... ...+..|...+ ....+++++.++++++.|+.+++|+....
T Consensus 238 ~~v~iw~~~~~~~~~~~~~~~~~~~~~v-~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 238 GRVFIWTCDDASSNTWSPKLLHKFNDVV-WHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp CEEEEEECSSTTCCCCBCCEEEECSSCE-EEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred CeEEEEEccCccccchhhhhhhcCCCcE-EEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 999999987631 12233344444 44557889999999999999999997643
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.5e-32 Score=247.57 Aligned_cols=250 Identities=17% Similarity=0.194 Sum_probs=190.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.....-..... ..+|...|.+++|+|++ ++|++|+.|++|++||+.+++ +.
T Consensus 407 i~~W~~~~~~~~~~~~~~~------~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~--------------~~ 465 (694)
T 3dm0_A 407 IILWKLTKDDKAYGVAQRR------LTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV--------------ST 465 (694)
T ss_dssp EEEEECCCSTTCSCEEEEE------EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--------------EE
T ss_pred EEEEEccCCCcccccccce------ecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc--------------ce
Confidence 5789887643211111111 12589999999999998 899999999999999999886 22
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCc---eEecccCCceeeEEEEe
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ---VYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~v~~~ 156 (312)
..+ .+|...|.+++|+|++++|+++ .|++|++||+... .... ...+|... |.+++|
T Consensus 466 ~~~-~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~----------------~~~~~~~~~~~h~~~--v~~~~~- 525 (694)
T 3dm0_A 466 RRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE----------------CKYTISEGGEGHRDW--VSCVRF- 525 (694)
T ss_dssp EEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC----------------EEEEECSSTTSCSSC--EEEEEE-
T ss_pred eEE-eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC----------------cceeeccCCCCCCCc--EEEEEE-
Confidence 222 7899999999999999988886 5999999998653 1111 11346654 999999
Q ss_pred cCCC--CEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhh
Q 021484 157 GPND--EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEK 233 (312)
Q Consensus 157 s~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~ 233 (312)
+|++ ..|++++.|+.|++||++++++...+.+|.+.|++++|+|++++|++++.|++|++||+.+++. ..+. +..
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~- 603 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANS- 603 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSS-
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCC-
Confidence 8876 5899999999999999999999999999999999999999999999999999999999988763 3332 222
Q ss_pred hhhhhccCCCCceeEEecCCceEEEEEecccCcc-----------------------------ceeEeecCCCccCCCCC
Q 021484 234 IMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL-----------------------------AYRERRYNAADFESDEE 284 (312)
Q Consensus 234 ~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~ 284 (312)
.+....+++++.++++++ ++.+++||+...... ....++|++..+.++..
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 344555777776666554 566999998654221 01256777888888888
Q ss_pred CCeEEEeecC
Q 021484 285 EGETYLLGFS 294 (312)
Q Consensus 285 ~~~v~~~~~~ 294 (312)
++.|.+|++.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 8888888864
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.8e-32 Score=225.31 Aligned_cols=255 Identities=12% Similarity=0.129 Sum_probs=187.4
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.||.+.|++++|+|+++++|++|+.|++|++||+.+.+... . .+...+.+|...|.+++|+|++++|+++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~---------~-~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY---------G-IPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS---------E-EEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc---------c-eeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 36999999999999866899999999999999998764210 0 1222337899999999999999999986
Q ss_pred -cCCcEEEEEcCCCcC--------------------------CCCCcCCcccccCCCC-CceEecccCCceeeEEEEecC
Q 021484 107 -NDELVYLFEKNMGLG--------------------------PSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~--------------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~s~ 158 (312)
.|+.|++|+...... ..+..+..|+...... .....+|... +..++| ++
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~--v~~~~~-~~ 181 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW--VSCVRF-SP 181 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC--EEEEEE-CS
T ss_pred cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc--ccceEE-cc
Confidence 599999999876540 0111222333222211 1222345544 888888 65
Q ss_pred C--CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhh
Q 021484 159 N--DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIM 235 (312)
Q Consensus 159 ~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~ 235 (312)
+ ..++++++.|+.|++||+++++.+..+.+|...|++++|+|++++|++++.|++|++||+++... ..+. +...+
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v- 259 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDII- 259 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCE-
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCceE-
Confidence 5 45788999999999999999999999999999999999999999999999999999999988764 2222 22223
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCc------------------cc-eeEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQT------------------LA-YRERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~------------------~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
....++++ ..+++++.|+.+++|+++.... .+ ...+.|++..+.+...++.|.+|+++.|
T Consensus 260 ~~~~~~~~-~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 260 NALCFSPN-RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEEECSS-SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred EeeecCCC-CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 33445554 4566777899999999764311 11 1256778888888888888999998766
Q ss_pred C
Q 021484 297 D 297 (312)
Q Consensus 297 ~ 297 (312)
.
T Consensus 339 t 339 (340)
T 4aow_A 339 T 339 (340)
T ss_dssp -
T ss_pred C
Confidence 4
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-31 Score=230.84 Aligned_cols=229 Identities=16% Similarity=0.118 Sum_probs=183.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCc
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~ 110 (312)
.+....|+|++ ++|++|+.||.|++||+.+++. ...+..|...|.+++|+|++++|+++ .|+.
T Consensus 99 ~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~---------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 99 YTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQ---------------REIDQAHVSEITKLKFFPSGEALISSSQDMQ 162 (420)
T ss_dssp EEEEEEECSSS-CEEEEEETTSCEEEECTTSCEE---------------EEETTSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceEEEEEecCC-CEEEEEECCCCEEEEeCCCcce---------------eeecccccCccEEEEECCCCCEEEEEeCCCe
Confidence 34555788888 8999999999999999997762 22336899999999999999988887 5999
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecC-
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD- 189 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~- 189 (312)
|++||+.++ +....+.+|... |.+++| +|++++|++++.||.|++||+++++.+..+..|
T Consensus 163 i~iwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 223 (420)
T 3vl1_A 163 LKIWSVKDG----------------SNPRTLIGHRAT--VTDIAI-IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKE 223 (420)
T ss_dssp EEEEETTTC----------------CCCEEEECCSSC--EEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTT
T ss_pred EEEEeCCCC----------------cCceEEcCCCCc--EEEEEE-cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCC
Confidence 999999987 788889999876 999999 899999999999999999999999999888753
Q ss_pred --c---------------------cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCC-CChhhhhhhhccCCCC
Q 021484 190 --R---------------------HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP-DNAEKIMKANKQGRED 244 (312)
Q Consensus 190 --~---------------------~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 244 (312)
. ..+.+++|+|++++|++++.||.|++||++++.. ..+. .|...+ ....+++++
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~~~ 302 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC-NSLTVDGNN 302 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE-EEEEECSSC
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc-eeEEEeCCC
Confidence 2 3445556689999999999999999999988763 3332 244444 445577777
Q ss_pred c-eeEEecCCceEEEEEecccCccce-----------eEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 245 H-SRITLTPDVIMHVLRLQRRQTLAY-----------RERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 245 ~-~l~s~~~d~~i~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
. ++++++.|+.+++||++....... ....++...+.+...++.+.+|++.+.
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 6 999999999999999876533211 123345566777788889999998764
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.8e-32 Score=228.32 Aligned_cols=250 Identities=13% Similarity=0.125 Sum_probs=191.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCC---cEEEEEeCCCeEEEEEccCCeecCCCCCCCCccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNP---NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT 77 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 77 (312)
|++||+.+.+....+...... .|...|++++|+|++. .+|++|+.||.|++||+.+++.
T Consensus 46 v~vw~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~------------ 107 (366)
T 3k26_A 46 VTLYECHSQGEIRLLQSYVDA------DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC------------ 107 (366)
T ss_dssp EEEEEECGGGCEEEEEEEECS------CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE------------
T ss_pred EEEEEcCCCcEEEeeeecccc------CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE------------
Confidence 579999877655555443222 2678899999999831 6999999999999999998762
Q ss_pred ccccccccCCCccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE---ecccCCceeeE
Q 021484 78 FCPRHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SGHRNSQTVKG 152 (312)
Q Consensus 78 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~ 152 (312)
... +.+|...|.+++|+| ++.+|+++ .|+.|++||+.++ +....+ .+|... |.+
T Consensus 108 --~~~-~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~~--v~~ 166 (366)
T 3k26_A 108 --IKH-YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD----------------TLVAIFGGVEGHRDE--VLS 166 (366)
T ss_dssp --EEE-EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT----------------EEEEEECSTTSCSSC--EEE
T ss_pred --eee-ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC----------------eEEEEecccccccCc--eeE
Confidence 222 267899999999999 88888886 5999999999887 566666 567755 999
Q ss_pred EEEecCCCCEEEEeccCceEEEEeccCCeeEEEee----------------------------cCccceEEEEEcCCCCe
Q 021484 153 VNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV----------------------------GDRHVVNQLEPHPHIPM 204 (312)
Q Consensus 153 v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~----------------------------~~~~~v~~~~~~p~~~~ 204 (312)
++| +|++++|++++.||.|++||+++++.+..+. .|...|.+++|+ +++
T Consensus 167 ~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 167 ADY-DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EEE-CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EEE-CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 999 9999999999999999999998765543333 388999999998 779
Q ss_pred EEEEeCCCcEEEccCCCCCC---------------CCCCCChhhhhhhhccCCC--CceeEEecCCceEEEEEecccCcc
Q 021484 205 FATCGIEKTVKLWAPMPTDF---------------PPLPDNAEKIMKANKQGRE--DHSRITLTPDVIMHVLRLQRRQTL 267 (312)
Q Consensus 205 l~t~~~d~~i~iwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~i~~~~~~~~~ 267 (312)
+++++.|+.|++||+.+... ..+..|...+ ....++++ +.++++++.|+.+++|++......
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDI-WYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCS-SCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcE-EEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 99999999999999877542 1112233333 34446667 899999999999999998764321
Q ss_pred ----------------ceeEeecCCCccCCCCCCCeEEEeec
Q 021484 268 ----------------AYRERRYNAADFESDEEEGETYLLGF 293 (312)
Q Consensus 268 ----------------~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (312)
....+.+++..+.+...++.|++||+
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 11255666677777777777777775
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.7e-31 Score=224.35 Aligned_cols=252 Identities=13% Similarity=0.199 Sum_probs=198.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+... |...|++++|+|++ .+|++|+.||.|++||+.+++. .
T Consensus 115 v~lw~~~~~~~~~~~~~~----------~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~--------------~ 169 (401)
T 4aez_A 115 VYVWNADSGSVSALAETD----------ESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTK--------------L 169 (401)
T ss_dssp EEEEETTTCCEEEEEECC----------TTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE--------------E
T ss_pred EEEeeCCCCcEeEeeecC----------CCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeE--------------E
Confidence 578999887655444432 67889999999998 8999999999999999988762 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ ..|...|.+++|+ +.+|+++ .|+.|++||++... .....+.+|... |.+++| +|+
T Consensus 170 ~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~--v~~~~~-~~~ 228 (401)
T 4aez_A 170 RTM-AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN---------------HQIGTLQGHSSE--VCGLAW-RSD 228 (401)
T ss_dssp EEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE-CTT
T ss_pred EEe-cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc---------------ceeeEEcCCCCC--eeEEEE-cCC
Confidence 222 6889999999994 5678776 69999999998531 566778888866 999999 899
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEe--CCCcEEEccCCCCCCCCCCCChhhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCG--IEKTVKLWAPMPTDFPPLPDNAEKIMK 236 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~t~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~ 236 (312)
+++|++++.||.|++||+++++++..+..|...|.+++|+|++.. +++++ .|+.|++||+.++.......+...+ .
T Consensus 229 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v-~ 307 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQV-T 307 (401)
T ss_dssp SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCE-E
T ss_pred CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcE-E
Confidence 999999999999999999999999999999999999999998765 56654 7999999999987642222233333 4
Q ss_pred hhccCCCCceeEE--ecCCceEEEEEecccCcc------------ceeEeecCCCccCCCCCCCeEEEeecCCCCCC
Q 021484 237 ANKQGREDHSRIT--LTPDVIMHVLRLQRRQTL------------AYRERRYNAADFESDEEEGETYLLGFSDSDAS 299 (312)
Q Consensus 237 ~~~~~~~~~~l~s--~~~d~~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 299 (312)
...+++++..+++ +..|+.+++|++...... ....+.+++..+.+...++.+.+|++.++...
T Consensus 308 ~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 308 SLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred EEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 5557888888888 558999999998763211 11266778888888888899999999877643
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.9e-31 Score=223.16 Aligned_cols=234 Identities=14% Similarity=0.115 Sum_probs=183.3
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccccccc-ccCCCccEEEEEEcc-CCCeEEE
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN-TSELLIS 105 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~s 105 (312)
+|...|++++|+|+++++|++|+.||.|++||+.+++. ...+ ..+|...|.+++|+| ++.+|++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--------------TSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--------------EEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--------------ceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 58999999999999867999999999999999997752 1111 146899999999999 6678888
Q ss_pred e-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc-CCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE
Q 021484 106 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 106 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
+ .|+.|++||+.+. ....+..+. ....|.+++| +|++++|++++.|+.|++||+ +++++
T Consensus 137 ~~~d~~i~iwd~~~~-----------------~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 137 SSIRGATTLRDFSGS-----------------VIQVFAKTDSWDYWYCCVDV-SVSRQMLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp EETTTEEEEEETTSC-----------------EEEEEECCCCSSCCEEEEEE-ETTTTEEEEEETTSEEEEEET-TSCEE
T ss_pred EeCCCEEEEEECCCC-----------------ceEEEeccCCCCCCeEEEEE-CCCCCEEEEECCCCCEEEEEC-CCCEE
Confidence 6 5999999999863 444554443 1133999999 899999999999999999999 57888
Q ss_pred EEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCCC----CCCCCCChhhhhhhhccCC-CCceeEEecCCceEE
Q 021484 184 RLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD----FPPLPDNAEKIMKANKQGR-EDHSRITLTPDVIMH 257 (312)
Q Consensus 184 ~~~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~ 257 (312)
..+.+|...|.+++|+|+++ ++++++.|++|++||+++.. .....+|...+ ....+++ ++.++++++.|+.++
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPV-NAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCE-EEEEECTTTSCEEEEEESSSEEE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCce-EEEEEcCCCCCEEEEEcCCCcEE
Confidence 89999999999999999999 89999999999999998732 22222455555 4445777 899999999999999
Q ss_pred EEEecccCcccee---------------------------EeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 258 VLRLQRRQTLAYR---------------------------ERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 258 i~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
+||++........ .+.+++.. +...++.|+++|...+.
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 9998765432221 22333333 45577889999987664
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-31 Score=238.47 Aligned_cols=194 Identities=20% Similarity=0.362 Sum_probs=169.8
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|...|++++|+|++ ++|++++.|+.|++||.. ++ .... +.+|...|++++|+|++++|+++
T Consensus 383 ~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~--------------~~~~-~~~~~~~v~~~~~s~d~~~l~~~~ 445 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--------------LLQT-LTGHSSSVWGVAFSPDDQTIASAS 445 (577)
T ss_dssp CCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CC--------------EEEE-EECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CC--------------EEEE-ecCCCCCeEEEEECCCCCEEEEEc
Confidence 378899999999999 899999999999999964 33 1122 26789999999999999999986
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.|+.|++||... +.+..+.+|... |.+++| +|++++|++++.|+.|++||. +++++..+
T Consensus 446 ~d~~v~~w~~~~-----------------~~~~~~~~~~~~--v~~~~~-spd~~~las~~~d~~i~iw~~-~~~~~~~~ 504 (577)
T 2ymu_A 446 DDKTVKLWNRNG-----------------QLLQTLTGHSSS--VRGVAF-SPDGQTIASASDDKTVKLWNR-NGQLLQTL 504 (577)
T ss_dssp TTSEEEEEETTS-----------------CEEEEEECCSSC--EEEEEE-CTTSCEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred CCCEEEEEECCC-----------------CEEEEEcCCCCC--EEEEEE-cCCCCEEEEEeCCCEEEEEcC-CCCEEEEE
Confidence 599999999754 477788888866 999999 999999999999999999995 68889999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEE
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~ 260 (312)
.+|...|++++|+|++++|++++.|+.|++||.....+..+.+|...+... .+++++++|++++.|+.|++||
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~-~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV-AFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEE-EECTTSSCEEEEETTSCEEEEC
T ss_pred eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEE-EEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999999999998766667777888777544 4788999999999999999996
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.6e-31 Score=229.62 Aligned_cols=252 Identities=14% Similarity=0.098 Sum_probs=179.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+.+.+....+.. .+|...|++++|+|.++++|++|+.||+|++||+++..+. .
T Consensus 144 i~lWd~~~~~~~~~~~~---------~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~-------------~ 201 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKG---------IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR-------------V 201 (435)
T ss_dssp EEEECSSCCSCCEEECC---------CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-------------E
T ss_pred EEEEECCCCCceeEEEc---------cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-------------E
Confidence 57899887654333322 2589999999999965589999999999999999866421 0
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
......+...+.+++|+|++++|+++ .|+.|++||++. +.+..+.+|... |.+++| +|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-----------------~~~~~~~~h~~~--v~~v~~-~p~ 261 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-----------------KELWNLRMHKKK--VTHVAL-NPC 261 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-----------------CBCCCSBCCSSC--EEEEEE-CTT
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-----------------ceeEEEecccce--EEeeee-cCC
Confidence 11112344567899999999999997 599999999975 356677888866 999999 888
Q ss_pred CC-EEEEeccCceEEEEeccCCeeEEE---eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChh--
Q 021484 160 DE-YVMSGSDCGHLFIWKKKGGKLVRL---MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAE-- 232 (312)
Q Consensus 160 ~~-~l~~~~~dg~v~iwd~~~~~~~~~---~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~-- 232 (312)
+. +|++|+.|+.|++||+++.+.... ..+|...|++++|+|++.+|++++.|++|+|||+.++.. ..+..|..
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~ 341 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRH 341 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCC
T ss_pred CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccc
Confidence 76 688999999999999987664433 357899999999999999999999999999999987642 11111111
Q ss_pred ----hhhhhhccCCCCceeEEe------------cCCceEEEEEecccCccce------------eEeecCCCccCCCCC
Q 021484 233 ----KIMKANKQGREDHSRITL------------TPDVIMHVLRLQRRQTLAY------------RERRYNAADFESDEE 284 (312)
Q Consensus 233 ----~~~~~~~~~~~~~~l~s~------------~~d~~i~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 284 (312)
..+.. .+.++...++.+ ..++.|++|+..++..... ..+.|++..++++.
T Consensus 342 ~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~- 419 (435)
T 4e54_B 342 FQHLTPIKA-AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM- 419 (435)
T ss_dssp CSSSCCCBC-EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-
T ss_pred cccceeEEE-EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-
Confidence 11111 233333333332 2346799999765432211 14677777777665
Q ss_pred CCeEEEeecCCC
Q 021484 285 EGETYLLGFSDS 296 (312)
Q Consensus 285 ~~~v~~~~~~~~ 296 (312)
++.|.+|+..++
T Consensus 420 d~~i~iW~~~~g 431 (435)
T 4e54_B 420 GYHILIWSQQEA 431 (435)
T ss_dssp SSEEEECCCC--
T ss_pred CCcEEEEECCcC
Confidence 557999988765
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.9e-31 Score=236.31 Aligned_cols=196 Identities=20% Similarity=0.344 Sum_probs=169.6
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|..+|.+++|+|++ +.|++++.|+.|++|+.. ++ .... +..|...|.+++|+|++++|+++
T Consensus 342 ~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~-~~--------------~~~~-~~~~~~~v~~~~~s~dg~~l~~~~ 404 (577)
T 2ymu_A 342 GHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--------------LLQT-LTGHSSSVRGVAFSPDGQTIASAS 404 (577)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT-CC--------------EEEE-EECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC-CC--------------EEEE-ecCCCCCeEEEEECCCCCEEEEEe
Confidence 478899999999999 899999999999999964 33 1122 26789999999999999998886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.|+.|++||... +.+..+.+|... |.+++| +|++++|++++.|+.|++||. +++.+..+
T Consensus 405 ~d~~v~~~~~~~-----------------~~~~~~~~~~~~--v~~~~~-s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~ 463 (577)
T 2ymu_A 405 DDKTVKLWNRNG-----------------QLLQTLTGHSSS--VWGVAF-SPDDQTIASASDDKTVKLWNR-NGQLLQTL 463 (577)
T ss_dssp TTSEEEEECTTC-----------------CEEEEEECCSSC--EEEEEE-CTTSSEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred CCCEEEEEeCCC-----------------CEEEEecCCCCC--eEEEEE-CCCCCEEEEEcCCCEEEEEEC-CCCEEEEE
Confidence 599999999643 567788888866 999999 999999999999999999996 57788899
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
.+|...|.+++|+|++++|++++.|++|++||.....+..+.+|...+.. ..+++++.+|++++.|+.|++||..
T Consensus 464 ~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~-l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRG-VAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEE-EEECTTSSCEEEEETTSEEEEECTT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEE-EEEcCCCCEEEEEECcCEEEEEeCC
Confidence 99999999999999999999999999999999766656677777777644 4578899999999999999999953
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-30 Score=224.22 Aligned_cols=267 Identities=11% Similarity=0.133 Sum_probs=200.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+....+.+.. .+|...|++++|+|++ .+|++|+.||.|++|++.+.... . ..
T Consensus 47 v~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~-----~------~~ 105 (416)
T 2pm9_A 47 LELWSLLAADSEKPIAS---------LQVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNA-----I------NS 105 (416)
T ss_dssp CEEEESSSGGGCSCSCC---------CCCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSC-----C------CE
T ss_pred EEEEEccCCCCCcEEEE---------EecCCceEEEEECCCC-CeEEEEccCCeEEEeeccccccc-----c------cc
Confidence 57888876543212111 1378899999999998 79999999999999999872100 0 12
Q ss_pred cccccCCCccEEEEEEccC-CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNT-SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
...+..|...|.+++|+|+ +.+|+++ .|+.|++||+.+....... . .......+..|... |.+++| +|
T Consensus 106 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~------~-~~~~~~~~~~~~~~--v~~~~~-~~ 175 (416)
T 2pm9_A 106 MARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN------Y-TPLTPGQSMSSVDE--VISLAW-NQ 175 (416)
T ss_dssp EEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT------C-CCBCCCCSCCSSCC--CCEEEE-CS
T ss_pred hhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc------c-cccccccccCCCCC--eeEEEe-CC
Confidence 2223779999999999998 7888887 5999999999876200000 0 00011223456655 999999 88
Q ss_pred C-CCEEEEeccCceEEEEeccCCeeEEEeecC------ccceEEEEEcCCC-CeEEEEeCCC---cEEEccCCCC-C-CC
Q 021484 159 N-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGD------RHVVNQLEPHPHI-PMFATCGIEK---TVKLWAPMPT-D-FP 225 (312)
Q Consensus 159 ~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~p~~-~~l~t~~~d~---~i~iwd~~~~-~-~~ 225 (312)
+ +.+|++++.||.|++||+++++.+..+..| ...|.+++|+|++ .++++++.|+ .|++||+++. . ..
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 8 789999999999999999999999888876 7889999999997 5799999998 9999999985 3 45
Q ss_pred CCC-CChhhhhhhhccCC-CCceeEEecCCceEEEEEecccCccc----------eeEeecCC-CccCCCCCCCeEEEee
Q 021484 226 PLP-DNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRRQTLA----------YRERRYNA-ADFESDEEEGETYLLG 292 (312)
Q Consensus 226 ~~~-~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~v~~~~ 292 (312)
.+. +|...+.... +++ ++.++++++.|+.+++|++....... ...+.|+. ..+.+...++.|.+++
T Consensus 256 ~~~~~~~~~v~~~~-~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 256 TLNQGHQKGILSLD-WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp CCCSCCSSCEEEEE-ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEE
T ss_pred EeecCccCceeEEE-eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEE
Confidence 555 6766665444 666 89999999999999999987643221 12566766 6778888889999999
Q ss_pred cCCCCCC
Q 021484 293 FSDSDAS 299 (312)
Q Consensus 293 ~~~~~~~ 299 (312)
+......
T Consensus 335 ~~~~~~~ 341 (416)
T 2pm9_A 335 LQNLTNT 341 (416)
T ss_dssp SCCCCCS
T ss_pred ccCCCCC
Confidence 9776543
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.6e-31 Score=222.80 Aligned_cols=199 Identities=9% Similarity=0.060 Sum_probs=160.9
Q ss_pred CccceEEEEEcCCCCcEEE--EEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 29 NSIRLNAIVIDPRNPNYFA--VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~--~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
+...+.+++|+|+| ++++ +++.|++|++||+.++++ ...+ .|...|.+++|+|+|++++++
T Consensus 132 ~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~--------------~~~~--~~~~~V~~v~fspdg~~l~s~ 194 (365)
T 4h5i_A 132 ADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTE--------------KFEI--ETRGEVKDLHFSTDGKVVAYI 194 (365)
T ss_dssp TTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEE--------------EEEE--ECSSCCCEEEECTTSSEEEEE
T ss_pred cccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcE--------------EEEe--CCCCceEEEEEccCCceEEec
Confidence 45668999999999 6655 455799999999998873 2222 366789999999999999999
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCc--eEecccCCceeeEEEEecCCCCEEEEeccCc----eEEEEeccCC
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ--VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG----HLFIWKKKGG 180 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg----~v~iwd~~~~ 180 (312)
+++.+.+|+..++ +... ...+|. ..|.+++| +|+++++++++.|+ .+++|++...
T Consensus 195 s~~~~~~~~~~~~----------------~~~~~~~~~~~~--~~v~~v~f-spdg~~l~~~s~d~~~~~~i~~~~~~~~ 255 (365)
T 4h5i_A 195 TGSSLEVISTVTG----------------SCIARKTDFDKN--WSLSKINF-IADDTVLIAASLKKGKGIVLTKISIKSG 255 (365)
T ss_dssp CSSCEEEEETTTC----------------CEEEEECCCCTT--EEEEEEEE-EETTEEEEEEEESSSCCEEEEEEEEETT
T ss_pred cceeEEEEEeccC----------------cceeeeecCCCC--CCEEEEEE-cCCCCEEEEEecCCcceeEEeecccccc
Confidence 8888888888765 3332 223455 34999999 89999999999887 6888998766
Q ss_pred ee----EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CC-CCCChhhhhhhhccCCCCceeEEecCCc
Q 021484 181 KL----VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PP-LPDNAEKIMKANKQGREDHSRITLTPDV 254 (312)
Q Consensus 181 ~~----~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 254 (312)
.. ...+.+|...|++++|+|+|++||+|+.|++|+|||+++++. .. +.+|...+ ....+++++.+|++++.|+
T Consensus 256 ~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V-~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 256 NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI-TEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCE-EEEEECTTSCEEEEEETTS
T ss_pred eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCE-EEEEECCCCCEEEEEeCCC
Confidence 53 345678999999999999999999999999999999998874 44 45677776 4455899999999999999
Q ss_pred eEEEEEeccc
Q 021484 255 IMHVLRLQRR 264 (312)
Q Consensus 255 ~i~i~~~~~~ 264 (312)
+|+||++...
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999998644
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-31 Score=223.09 Aligned_cols=234 Identities=14% Similarity=0.151 Sum_probs=189.5
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC--CCeEEE
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLIS 105 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~s 105 (312)
+|..+|++++|+|++ .+|++|+.||.|++||+..... .....+.+|...|++++|+++ +.+|++
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 9 AHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-------------KLIDTLTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp ECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc-------------eeeeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence 589999999999998 8999999999999999984331 122223789999999999987 888888
Q ss_pred e-cCCcEEEEEcCCCcCCCCCcCCcccccCCC--CCceEecccCCceeeEEEEecCC--CCEEEEeccCceEEEEeccCC
Q 021484 106 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGG 180 (312)
Q Consensus 106 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~~~s~~--~~~l~~~~~dg~v~iwd~~~~ 180 (312)
+ .|+.|++||+.++ + ....+..|... |.+++| +|+ +++|++++.|+.|++||++++
T Consensus 75 ~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 75 CSYDGKVLIWKEENG----------------RWSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EETTSCEEEEEEETT----------------EEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred eccCCEEEEEEcCCC----------------ceeEeeeecCCCcc--eEEEEe-CCCCCCCEEEEecCCCcEEEEecCCC
Confidence 6 5999999999876 4 55666677765 999999 898 999999999999999999877
Q ss_pred e--eEEEeecCccceEEEEEcC-------------CCCeEEEEeCCCcEEEccCCCCCC-----CCCCCChhhhhhhhcc
Q 021484 181 K--LVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTDF-----PPLPDNAEKIMKANKQ 240 (312)
Q Consensus 181 ~--~~~~~~~~~~~v~~~~~~p-------------~~~~l~t~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~ 240 (312)
. ....+..|...|.+++|+| ++.++++++.|+.|++||+++... ..+.+|...+. ...+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~-~~~~ 214 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAW 214 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE-EEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEe-EEEE
Confidence 3 4456678999999999999 689999999999999999986542 34455666554 4457
Q ss_pred CCC---CceeEEecCCceEEEEEecccC--------------ccc-eeEeecCCCccCCCCCCCeEEEeecCC
Q 021484 241 GRE---DHSRITLTPDVIMHVLRLQRRQ--------------TLA-YRERRYNAADFESDEEEGETYLLGFSD 295 (312)
Q Consensus 241 ~~~---~~~l~s~~~d~~i~i~~~~~~~--------------~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~ 295 (312)
+++ +.++++++.|+.+++|++.... ..+ ...+.+++..+.+...++.++++++..
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 777 8999999999999999987642 111 126778888888877888899999863
No 50
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.7e-31 Score=221.59 Aligned_cols=255 Identities=9% Similarity=0.095 Sum_probs=193.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCC--CcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.+.+........ |..+|++++|+|++ +.+|++|+.||.|++||+.+++
T Consensus 46 v~iw~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------------- 101 (357)
T 3i2n_A 46 IQLYEIQHGDLKLLREIE----------KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-------------- 101 (357)
T ss_dssp EEEEEECSSSEEEEEEEE----------ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--------------
T ss_pred EEEEeCCCCcccceeeec----------ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--------------
Confidence 578999877654444332 67899999999983 3799999999999999999775
Q ss_pred cccccccCCCccEEEEEE------ccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC--Cce
Q 021484 79 CPRHLIGKNNIHITGLAY------SNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQT 149 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~------~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 149 (312)
.....+.+|...|.+++| +|++++|+++ .|+.|++||+.++. .....+..+.. ...
T Consensus 102 ~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~---------------~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 102 MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD---------------DPVANMEPVQGENKRD 166 (357)
T ss_dssp SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS---------------SCSEEECCCTTSCCCC
T ss_pred ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC---------------CcceeccccCCCCCCc
Confidence 122223689999999955 6788888886 59999999998861 25566655443 124
Q ss_pred eeEEEE---ecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcC---CCCeEEEEeCCCcEEEccCCCCC
Q 021484 150 VKGVNF---FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP---HIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 150 v~~v~~---~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p---~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+.+++| +++++++|++++.||.|++||+++++.... ..|...|.+++|+| ++.++++++.||.|++||+++..
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 888883 279999999999999999999999887544 56888999999999 89999999999999999998765
Q ss_pred C-CCCC-----CChhhhhhhhccCCCCc-eeEEecCCceEEEEEecccCcc-----------------------------
Q 021484 224 F-PPLP-----DNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQTL----------------------------- 267 (312)
Q Consensus 224 ~-~~~~-----~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~i~~~~~~~~~----------------------------- 267 (312)
. ..+. +|...+.. ..+++++. ++++++.|+.+++|+++.....
T Consensus 246 ~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQ-VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp TTTEEEEEEEECCSSCEEE-EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred cccceeeeccCCCcCCEEE-EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 3 2232 56555544 44677766 8999999999999998743211
Q ss_pred ceeEeecCCCccC-CCCCCCeEEEeecCCC
Q 021484 268 AYRERRYNAADFE-SDEEEGETYLLGFSDS 296 (312)
Q Consensus 268 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~ 296 (312)
.-..+.+++..+. +...++.+.+|++...
T Consensus 325 ~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 325 SSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 1126677777777 6777888999888654
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.4e-31 Score=222.32 Aligned_cols=248 Identities=11% Similarity=0.067 Sum_probs=185.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+.. .+|...|.+++|+|+++.+|++++.|+.|++||+.+.... .
T Consensus 98 i~iwd~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-------------~ 155 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQG---------MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQ-------------V 155 (383)
T ss_dssp EEEEETTSTTCEEEECC---------CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEE-------------E
T ss_pred EEEEeCCCcccceeeec---------CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceE-------------E
Confidence 57899987665444432 1388899999999943389999999999999999864321 1
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
......|...|.+++|+|++++|+++ .|+.|++||+.. +....+.+|... |.+++| +|+
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------------~~~~~~~~h~~~--v~~~~~-~~~ 215 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-----------------HEIFKEKLHKAK--VTHAEF-NPR 215 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-----------------CEEEEEECSSSC--EEEEEE-CSS
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-----------------CEEEEeccCCCc--EEEEEE-CCC
Confidence 11113456889999999999999887 599999999953 577888888866 999999 899
Q ss_pred CC-EEEEeccCceEEEEeccC----CeeEEEeecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCC-CCCCCC--
Q 021484 160 DE-YVMSGSDCGHLFIWKKKG----GKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDN-- 230 (312)
Q Consensus 160 ~~-~l~~~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~-- 230 (312)
++ +|++++.|+.|++||+++ ++++..+ +|...|.+++|+| ++.+|++++.|+.|++||+++... ..+..+
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCB
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccc
Confidence 98 899999999999999987 5666666 6999999999999 999999999999999999987653 222212
Q ss_pred -----hhhhhhh----------hccCCCCceeEEecCCceEEEEEecccCcc-----------cee-EeecCCCccCCCC
Q 021484 231 -----AEKIMKA----------NKQGREDHSRITLTPDVIMHVLRLQRRQTL-----------AYR-ERRYNAADFESDE 283 (312)
Q Consensus 231 -----~~~~~~~----------~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~-----------~~~-~~~~~~~~~~~~~ 283 (312)
...+ .. ..+++++.+ +++.|+.+++||+.+.... ... .+.+++..+++..
T Consensus 295 ~~~~~~~~~-~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 295 RQFQHLTPI-KATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CCCTTSCCC-CCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred cccccccce-EEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 1111 11 223344444 6778999999998654321 111 5666777776664
Q ss_pred CCCeEEEeecCC
Q 021484 284 EEGETYLLGFSD 295 (312)
Q Consensus 284 ~~~~v~~~~~~~ 295 (312)
++.|.+|++++
T Consensus 372 -d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 -GFNILIWNRED 382 (383)
T ss_dssp -TTEEEEEECC-
T ss_pred -CCcEEEEecCC
Confidence 67788887753
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.7e-31 Score=233.11 Aligned_cols=261 Identities=9% Similarity=0.059 Sum_probs=180.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+...............+.....+|...|++++|+|. ..|++|+.||+|++||+++++ .+
T Consensus 237 vrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~--------------~~ 300 (524)
T 2j04_B 237 INFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPE--------------VP 300 (524)
T ss_dssp EEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCS--------------SC
T ss_pred EEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCC--------------Cc
Confidence 57899876542210000000011112458899999999985 479999999999999998764 23
Q ss_pred cccccCCCccEEEE--EEccCC-CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEe
Q 021484 81 RHLIGKNNIHITGL--AYSNTS-ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 81 ~~~~~~~~~~i~~~--~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 156 (312)
...+.+|...|.++ +|+|++ .+|+++ .|++|++||++++ +....+.+|.....|.+++|
T Consensus 301 ~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~----------------~~~~~~~~~~~~~~v~~v~f- 363 (524)
T 2j04_B 301 SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI----------------ATTKTTVSRFRGSNLVPVVY- 363 (524)
T ss_dssp SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH----------------HHHCEEEEECSCCSCCCEEE-
T ss_pred eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC----------------CcccccccccccCcccceEe-
Confidence 33337899999999 578888 788887 5999999999886 56667777754223789999
Q ss_pred cCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChh----
Q 021484 157 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAE---- 232 (312)
Q Consensus 157 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~---- 232 (312)
+|+++.+++++.|++|++||+++++++..+.+|.+.|++++|+|++++|++|+.|++|++||+....+........
T Consensus 364 sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~ 443 (524)
T 2j04_B 364 CPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKS 443 (524)
T ss_dssp ETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCC
T ss_pred CCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceee
Confidence 8999999999999999999999999888888999999999999999999999999999999987654333221110
Q ss_pred hhhhhhccCCCCceeEEecCCceEEEEE--------ecccCcccee-EeecCCC---ccCCCCCCCeEEEeecCC
Q 021484 233 KIMKANKQGREDHSRITLTPDVIMHVLR--------LQRRQTLAYR-ERRYNAA---DFESDEEEGETYLLGFSD 295 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~~~d~~i~i~~--------~~~~~~~~~~-~~~~~~~---~~~~~~~~~~v~~~~~~~ 295 (312)
..+....+++++..+ ....+..+..|+ +......++. .+.|+.. .++++..+|.|.++++.-
T Consensus 444 ~~v~~v~~sp~g~~~-~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 444 LRLWKWDYSIKDDKY-RIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CEEEECBCCSSSCEE-EECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eEEEEeccCCCCCeE-EccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 011122345554433 222222222222 2222233333 7777753 678888888898888743
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7e-31 Score=225.44 Aligned_cols=216 Identities=13% Similarity=0.207 Sum_probs=175.1
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|...|++++|+|++ .+|++++.||.|++||. +++ .... +..|...|.+++|+|++++|+++
T Consensus 106 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~-~~~--------------~~~~-~~~~~~~v~~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDG-NSIVTGVENGELRLWNK-TGA--------------LLNV-LNFHRAPIVSVKWNKDGTHIISMD 168 (425)
T ss_dssp --CBCEEEEEECTTS-SEEEEEETTSCEEEEET-TSC--------------EEEE-ECCCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEEEcCCC-CEEEEEeCCCeEEEEeC-CCC--------------eeee-ccCCCccEEEEEECCCCCEEEEEe
Confidence 368899999999998 89999999999999993 343 1222 26789999999999999988886
Q ss_pred cCCcEEEEEcCCCcCC----------------------------------------CCCcCCcccccCCCCCceEecccC
Q 021484 107 NDELVYLFEKNMGLGP----------------------------------------SPLSLSPEDLQKREEPQVYSGHRN 146 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 146 (312)
.|+.|++||+.++... ....+..+++...+....+..|..
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHG 248 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSS
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCC
Confidence 5999999999765310 011334445556666777777876
Q ss_pred CceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-C
Q 021484 147 SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-P 225 (312)
Q Consensus 147 ~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~ 225 (312)
. |.+++| +|++++|++++.||.|++||+++++.+..+..|...|.+++|+|++ .+++++.|+.|++||+.+++. .
T Consensus 249 ~--i~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 249 P--ISVLEF-NDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp C--EEEEEE-ETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred c--eEEEEE-CCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 5 999999 8999999999999999999999999999999999999999999999 999999999999999988763 3
Q ss_pred CCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 226 PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
.+..+...+ ....+++++.++++++.|+.+++|++....
T Consensus 325 ~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 325 LSIVDGVPI-FAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEECTTCCE-EEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred ecccCCccE-EEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 344444444 444578889999999999999999987654
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.98 E-value=1.1e-30 Score=217.59 Aligned_cols=240 Identities=14% Similarity=0.104 Sum_probs=192.0
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|..+|++++|+|++ ++|++++ ||.|++||+.+++.... +..+ ....|...|.+++|+|++++|+++
T Consensus 49 ~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~------~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 49 NHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSP------VSQL----DCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp CCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSC------SEEE----ECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred cCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceee------eecc----cccCCCCcEEEEEEcCCCCEEEEEc
Confidence 489999999999998 7999988 99999999987652111 1100 012688999999999999988886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.|+.|++||+.++. ......+..|... +.+++| +|++++|++++.||.|++||+++++.+..+
T Consensus 117 ~d~~i~~~d~~~~~--------------~~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 117 EASTLSIWDLAAPT--------------PRIKAELTSSAPA--CYALAI-SPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp SSSEEEEEECCCC----------------EEEEEEECSSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCcEEEEECCCCC--------------cceeeecccCCCc--eEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCceeeee
Confidence 59999999998761 0144556677755 999999 999999999999999999999999999999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
..|...|.+++|+|+++++++++.|+.|++||+++++......+...+ ....+++++.++++++.++.+++|++.....
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI-FSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCce-EEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 999999999999999999999999999999999887642222233333 4445778899999999999999999875432
Q ss_pred c---------ceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 267 L---------AYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 267 ~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
. ....+.+++..+.+...++.+.+++...+.
T Consensus 259 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 2 122667777788888888899999987664
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=1.1e-30 Score=223.48 Aligned_cols=238 Identities=13% Similarity=0.119 Sum_probs=181.9
Q ss_pred CCCccceEEEEEcC-CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCC-CeEE
Q 021484 27 PMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLI 104 (312)
Q Consensus 27 ~~h~~~v~~~~~~p-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 104 (312)
.+|..+|++++|+| ++ ++|++|+.||+|++||+.++...... . .....+.+|...|.+++|+|++ .+|+
T Consensus 78 ~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~--~------~~~~~~~~h~~~v~~~~~~p~~~~~l~ 148 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPL--R------EPVITLEGHTKRVGIVAWHPTAQNVLL 148 (402)
T ss_dssp CCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCB--C------SCSEEEECCSSCEEEEEECSSBTTEEE
T ss_pred ecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCcccc--C------CceEEecCCCCeEEEEEECcCCCCEEE
Confidence 46999999999999 66 89999999999999999987532110 0 1112237899999999999998 5888
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE--ecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCe
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY--SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
++ .|+.|++||+.++ +....+ .+|... |.+++| +|++++|++++.||.|++||+++++
T Consensus 149 s~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 149 SAGCDNVILVWDVGTG----------------AAVLTLGPDVHPDT--IYSVDW-SRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEETTSCEEEEETTTT----------------EEEEEECTTTCCSC--EEEEEE-CTTSSCEEEEETTSEEEEEETTTTE
T ss_pred EEcCCCEEEEEECCCC----------------CccEEEecCCCCCc--eEEEEE-CCCCCEEEEEecCCcEEEEeCCCCc
Confidence 86 5999999999987 677777 667765 999999 9999999999999999999999999
Q ss_pred eEEEe-ecCccc-eEEEEEcCCCCeEEEE---eCCCcEEEccCCCCCC-C-CC-CCChhhhhhhhccCCCCceeE-EecC
Q 021484 182 LVRLM-VGDRHV-VNQLEPHPHIPMFATC---GIEKTVKLWAPMPTDF-P-PL-PDNAEKIMKANKQGREDHSRI-TLTP 252 (312)
Q Consensus 182 ~~~~~-~~~~~~-v~~~~~~p~~~~l~t~---~~d~~i~iwd~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~l~-s~~~ 252 (312)
.+..+ ..|.+. +..++|+|++.+|+++ +.|+.|++||+++... . .. ..+...+ ....+++++.+++ +++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC-EEEEEETTTTEEEEEETT
T ss_pred eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce-eEEEEcCCCCEEEEEEcC
Confidence 99888 678765 8999999999999999 7899999999987653 1 11 1233334 3345677777775 6778
Q ss_pred CceEEEEEecccCc-cce------------eEeecCCCccCCCCCCCeEEEeecCC
Q 021484 253 DVIMHVLRLQRRQT-LAY------------RERRYNAADFESDEEEGETYLLGFSD 295 (312)
Q Consensus 253 d~~i~i~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~v~~~~~~~ 295 (312)
|+.|++|++..... ... ..+.|+...+.+.++ .+.++++..
T Consensus 289 dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~--~~~~~~l~~ 342 (402)
T 2aq5_A 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCE--IARFYKLHE 342 (402)
T ss_dssp CSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTE--EEEEEEEET
T ss_pred CCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecce--eEEEEEcCC
Confidence 99999999987652 111 134555555555444 355666544
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=4.6e-31 Score=240.89 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=190.2
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|...|++++|+|++..+|++|+.|++|++|++.+.... .. .....+.+|...|.+++|+|++++|+++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---------~~-~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---------YG-VAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---------SC-EEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---------cc-cccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 599999999999987689999999999999999865310 00 1122337899999999999999999997
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.|+.|++||+.++ .....+.+|... |.+++| +|++++|++++.|++|++||..........
T Consensus 450 ~Dg~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 450 WDGELRLWDLAAG----------------VSTRRFVGHTKD--VLSVAF-SLDNRQIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp TTSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred CCCcEEEEECCCC----------------cceeEEeCCCCC--EEEEEE-eCCCCEEEEEeCCCEEEEEECCCCcceeec
Confidence 5999999999887 677888999976 999999 999999999999999999998755443332
Q ss_pred ---ecCccceEEEEEcCCC--CeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEE
Q 021484 187 ---VGDRHVVNQLEPHPHI--PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 187 ---~~~~~~v~~~~~~p~~--~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~ 260 (312)
.+|...|.+++|+|++ ..+++++.|++|++||+++.+. ..+.+|...+ ....+++++.++++++.|+.|++||
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v-~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV-STVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETTSBCEEEE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE-EEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3688899999999987 5799999999999999998764 4566676666 4445788999999999999999999
Q ss_pred ecccCcc---------ceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 261 LQRRQTL---------AYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 261 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
+...... ....++++...+.... ++.+.++|+..+.
T Consensus 590 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 590 LAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp TTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred CCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence 8765322 1125566655555443 3458888886653
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.5e-31 Score=226.70 Aligned_cols=221 Identities=10% Similarity=0.034 Sum_probs=165.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.....+.. +.+|..+|++++|+|++ ++|++++.|+.|++||+.+++. +..
T Consensus 35 i~iw~~~~~~~~~~~~---------~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~------------~~~ 92 (377)
T 3dwl_C 35 VELYEQDGNGWKHART---------FSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGT------------WKQ 92 (377)
T ss_dssp BCEEEEETTEEEECCC---------BCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------C------------CCC
T ss_pred EEEEEccCCceEEEEE---------EecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCc------------eee
Confidence 5788887652111111 13489999999999998 8999999999999999987650 012
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec-ccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~s~ 158 (312)
...+..|...|.+++|+|++++|+++ .|+.|++||+.++. .......+.+ |... |.+++| +|
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------------~~~~~~~~~~~h~~~--v~~~~~-~~ 156 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN-------------DWWVSKHLKRPLRST--ILSLDW-HP 156 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------------------CCCCEEECSSCCSC--EEEEEE-CT
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc-------------cceeeeEeecccCCC--eEEEEE-cC
Confidence 22236789999999999999988886 59999999998761 0014566776 7755 999999 99
Q ss_pred CCCEEEEeccCceEEEEecc------------------CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCC
Q 021484 159 NDEYVMSGSDCGHLFIWKKK------------------GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 220 (312)
Q Consensus 159 ~~~~l~~~~~dg~v~iwd~~------------------~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~ 220 (312)
++++|++++.|+.|++||+. .++++..+ .|...|.+++|+|++++|++++.|++|++||+.
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 99999999999999999985 35566666 899999999999999999999999999999998
Q ss_pred CCCC-----CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 221 PTDF-----PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 221 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
++.. ..+..|...+. ...+++++.++++++.++.+ +|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 236 APEQPPRALITVKLSQLPLR-SLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp STTSCEEECCCEECSSSCEE-EEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCcceeeEeecCCCCceE-EEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 8763 55566666554 44577888899988877766 66544
No 58
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.9e-31 Score=228.69 Aligned_cols=214 Identities=17% Similarity=0.275 Sum_probs=169.4
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC-CCeEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~s~ 106 (312)
+|...|++++|+|+++++|++++.|+.|++||+.+++.... ....+.. .....|...|.+++|+|+ +.+|+++
T Consensus 111 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 111 NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS-----NYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT-----TCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc-----ccccccc-ccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 48899999999998448999999999999999987751100 0000011 112578899999999999 5788886
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC----CceeeEEEEecCCC-CEEEEeccCc---eEEEEec
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVNFFGPND-EYVMSGSDCG---HLFIWKK 177 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~~~s~~~-~~l~~~~~dg---~v~iwd~ 177 (312)
.|+.|++||+.++ +....+..+.. ...+.+++| +|++ .+|++++.|+ .|++||+
T Consensus 185 ~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 185 GSSNFASIWDLKAK----------------KEVIHLSYTSPNSGIKQQLSVVEW-HPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp SSSSCEEEEETTTT----------------EEEEEECCCCCSSCCCCCEEEEEE-CSSCTTEEEEEECCSSSCCCCEEET
T ss_pred cCCCCEEEEECCCC----------------CcceEEeccccccccCCceEEEEE-CCCCCCEEEEEECCCCCceEEEEeC
Confidence 5999999999887 56666665520 134999999 8886 6899999998 9999999
Q ss_pred cCC-eeEEEee-cCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCC-ceeEEecC
Q 021484 178 KGG-KLVRLMV-GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGRED-HSRITLTP 252 (312)
Q Consensus 178 ~~~-~~~~~~~-~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~s~~~ 252 (312)
+++ +++..+. +|...|.+++|+| ++++|++++.|++|++||+++++. ..+..|...+.. ..+++++ .++++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~-~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK-TKFAPEAPDLFACASF 326 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC-EEECTTCTTEEEECCS
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEE-EEECCCCCCEEEEEec
Confidence 986 6777787 8999999999999 899999999999999999988764 455566666644 4467776 89999999
Q ss_pred CceEEEEEecccC
Q 021484 253 DVIMHVLRLQRRQ 265 (312)
Q Consensus 253 d~~i~i~~~~~~~ 265 (312)
|+.+++|++....
T Consensus 327 d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 327 DNKIEVQTLQNLT 339 (416)
T ss_dssp SSEEEEEESCCCC
T ss_pred CCcEEEEEccCCC
Confidence 9999999987643
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=2.1e-30 Score=225.67 Aligned_cols=261 Identities=13% Similarity=0.120 Sum_probs=195.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|..+|++++|+|++ +|++|+.||+|++||+.+++. .
T Consensus 144 i~vwd~~~~~~~~~~~-----------~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~--------------~ 196 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLS-----------GHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCC--------------T 196 (464)
T ss_dssp EEEEETTTTEEEEEEC-----------CCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEE--------------E
T ss_pred EEEEECCCCcEEEEEe-----------CCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcE--------------E
Confidence 5789988765433332 489999999999976 899999999999999998862 2
Q ss_pred cccccCCCccEEEEEEcc--CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCc-------ccccCCCCCceEecccCCcee
Q 021484 81 RHLIGKNNIHITGLAYSN--TSELLISY-NDELVYLFEKNMGLGPSPLSLSP-------EDLQKREEPQVYSGHRNSQTV 150 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~v 150 (312)
..+ .+|...|.+++|++ ++.+++++ .|+.|++||+.+........... ...........+.+|... +
T Consensus 197 ~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v 273 (464)
T 3v7d_B 197 HVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS--V 273 (464)
T ss_dssp EEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC--E
T ss_pred EEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce--E
Confidence 222 67999999999994 66788886 59999999998763110000000 000000123456667654 7
Q ss_pred eEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCC
Q 021484 151 KGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD 229 (312)
Q Consensus 151 ~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~ 229 (312)
.++ +++++++++++.||.|++||+++++++..+.+|...|.+++|+|+++++++++.|++|++||+++++. ..+.+
T Consensus 274 ~~~---~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 274 RTV---SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 350 (464)
T ss_dssp EEE---EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEE---cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC
Confidence 766 45789999999999999999999999999999999999999999999999999999999999988763 55666
Q ss_pred ChhhhhhhhccCCCCceeEEecCCceEEEEEecccCccc---------eeEeecCCCccCCCCCCCeEEEeecCCCCC
Q 021484 230 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA---------YRERRYNAADFESDEEEGETYLLGFSDSDA 298 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 298 (312)
|...+.... + ++.++++++.|+.+++|++....... ...+.+++..+.+.. ++.+.++++..+..
T Consensus 351 h~~~v~~~~-~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 351 HTALVGLLR-L--SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL 424 (464)
T ss_dssp CSSCEEEEE-E--CSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE
T ss_pred CCCcEEEEE-E--cCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE
Confidence 666664333 3 36799999999999999987643221 124566666666665 67899999988763
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=9.2e-32 Score=227.97 Aligned_cols=233 Identities=12% Similarity=0.122 Sum_probs=174.1
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-c
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 107 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~ 107 (312)
|..+|++++|+|++ ++|++|+.|+.|++||+.++... .... +.+|...|.+++|+|++++|+++ .
T Consensus 10 ~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~------------~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 10 LPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWK------------HART-FSDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp CSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEE------------ECCC-BCCCSSCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceE------------EEEE-EecCCceEEEEEEeCCCCEEEEEeC
Confidence 45689999999998 89999999999999999977310 1222 26899999999999999988887 5
Q ss_pred CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCe---eEE
Q 021484 108 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK---LVR 184 (312)
Q Consensus 108 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~---~~~ 184 (312)
|+.|++||+.++. .......+.+|... |.+++| +|++++|++++.|+.|++||+++++ ...
T Consensus 76 d~~v~vwd~~~~~-------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 76 DRNAYVYEKRPDG-------------TWKQTLVLLRLNRA--ATFVRW-SPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp TSSEEEC-------------------CCCCEEECCCCSSC--EEEEEC-CTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred CCeEEEEEcCCCC-------------ceeeeeEecccCCc--eEEEEE-CCCCCEEEEEecCCeEEEEEECCcccceeee
Confidence 9999999998761 01245556677765 999999 9999999999999999999999877 367
Q ss_pred Eeec-CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC-------------------CCCCCCChhhhhhhhccCCCC
Q 021484 185 LMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-------------------FPPLPDNAEKIMKANKQGRED 244 (312)
Q Consensus 185 ~~~~-~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 244 (312)
.+.. |...|.+++|+|++++|++++.|++|++||+.... ...+ .|...+ ....+++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-~~~~~sp~~ 217 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV-HAVGFSPSG 217 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE-EEEEECTTS
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE-EEEEECCCC
Confidence 7777 99999999999999999999999999999986322 1222 454444 445578899
Q ss_pred ceeEEecCCceEEEEEecccCc----c----------ceeEeecCCCccCCCCCCCeEEEeecC
Q 021484 245 HSRITLTPDVIMHVLRLQRRQT----L----------AYRERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 245 ~~l~s~~~d~~i~i~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
.++++++.|+.+++|++..... . ....+.+++..+.+..+++ +++++..
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~ 280 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGN 280 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeC
Confidence 9999999999999999987644 1 1125566776676665554 4466554
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.7e-30 Score=219.53 Aligned_cols=219 Identities=13% Similarity=0.080 Sum_probs=174.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+...+... .+|...|++++|+|++ ++|++++.||.|++||+.+++.. .
T Consensus 32 v~i~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~-------------~ 88 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHEL---------KEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWK-------------P 88 (372)
T ss_dssp EEEEEEETTEEEEEEEE---------ECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEE-------------E
T ss_pred EEEEeCCCCcEEeeeee---------cCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeee-------------e
Confidence 57888876642122222 1378899999999988 89999999999999999887621 1
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCC---CceE-ecccCCceeeEEEE
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREE---PQVY-SGHRNSQTVKGVNF 155 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~v~~v~~ 155 (312)
......|...|.+++|+|++++|+++ .|+.|++||+... .. ...+ ..|... |.+++|
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~----------------~~~~~~~~~~~~~~~~--i~~~~~ 150 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE----------------NDWWVCKHIKKPIRST--VLSLDW 150 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT----------------TTEEEEEEECTTCCSC--EEEEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC----------------CcceeeeeeecccCCC--eeEEEE
Confidence 11225688899999999999988886 5999999999876 22 2222 345544 999999
Q ss_pred ecCCCCEEEEeccCceEEEEec------------------cCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEc
Q 021484 156 FGPNDEYVMSGSDCGHLFIWKK------------------KGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 217 (312)
Q Consensus 156 ~s~~~~~l~~~~~dg~v~iwd~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iw 217 (312)
+|++++|++++.||.|++||+ ..++++..+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 151 -~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 229 (372)
T 1k8k_C 151 -HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA 229 (372)
T ss_dssp -CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred -cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 999999999999999999995 4678888998999999999999999999999999999999
Q ss_pred cCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 218 APMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 218 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
|+++++. ..+..+...+ ....+++++.+++++ .|+.+++|++..
T Consensus 230 d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 230 DADKKMAVATLASETLPL-LAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EGGGTTEEEEEECSSCCE-EEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ECCCCceeEEEccCCCCe-EEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9987763 4454455444 344467778877777 999999999977
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.6e-31 Score=233.22 Aligned_cols=232 Identities=9% Similarity=0.015 Sum_probs=175.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCC-----CcEEEEEeCCCeEEEEEccCCeecCCCCCCCCc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRN-----PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 75 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 75 (312)
|+|||+.+.+....... .. .+|...|.+++|+|++ ..+||+++.||+|++||+.++..... ...
T Consensus 185 I~iWd~~~~~~~~~~~~-~l------~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~----~~~ 253 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQ-TI------VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH----VFK 253 (524)
T ss_dssp EEEEEEETTTCCEEEEE-EE------EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS----EEE
T ss_pred EEEEEccCCCCCceEEE-EE------EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc----cce
Confidence 57999876553211100 00 1256789999999961 26999999999999999986642100 000
Q ss_pred ccccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEE-
Q 021484 76 DTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV- 153 (312)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v- 153 (312)
....+...+.+|...|++++|++++ .|+++ .||+|++||++++. .+...+.+|... |.++
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~---------------~~~~~~~~H~~~--V~sv~ 315 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE---------------VPSFYDQVHDSY--ILSVS 315 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS---------------SCSEEEECSSSC--EEEEE
T ss_pred eecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC---------------CceEEeeccccc--EEEEE
Confidence 0001112236789999999999865 67776 69999999998651 344568889866 9999
Q ss_pred -EEecCCC-CEEEEeccCceEEEEeccCCeeEEEeecCcc--ceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCC
Q 021484 154 -NFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP 228 (312)
Q Consensus 154 -~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~ 228 (312)
+| ++++ ++|++|+.|++|++||+++++++..+.+|.. .|.+++|+|+++.+++++.|++|++||++.+.. ..+.
T Consensus 316 ~~~-s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 316 TAY-SDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp EEC-CTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred EEc-CCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee
Confidence 45 8887 8999999999999999998887777776653 578999999999999999999999999988764 5566
Q ss_pred CChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 229 DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
+|...+... .+++++.++++++.|+.+++|++..
T Consensus 395 gH~~~V~sv-a~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 395 SRETTITAI-GVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp ECSSCEEEE-ECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cCCCceEEE-EeCCCCCeEEEEECCCEEEEEechH
Confidence 777777554 4788999999999999999999754
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3e-30 Score=220.03 Aligned_cols=224 Identities=8% Similarity=0.034 Sum_probs=173.2
Q ss_pred CeeecccCccc----eeeEEecccccCCcCCCCccceEEEEEcCC---CC---cEEEEEeCCCeEEEEEccCCeecCCCC
Q 021484 1 MWQFDLRSDSA----TRLFYCSSFSENSKQPMNSIRLNAIVIDPR---NP---NYFAVGGSDEYARVYDIRKCHWYSPIS 70 (312)
Q Consensus 1 v~~wd~~~~~~----~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~ 70 (312)
|++||+.+.+. ..+... .+|..+|++++|+|+ .+ .+|++++.||.|++|++.+++...
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~--- 105 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSH---------FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK--- 105 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEE---------ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC---
T ss_pred EEEEECCCcccccCCCcceEE---------ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc---
Confidence 57899987651 112222 137889999999997 23 589999999999999998775200
Q ss_pred CCCCcccccccccccCC-----CccEEEEEEc----cCCCe-EEEe-cCCcEEEEEcCC------CcCCCCCcCCccccc
Q 021484 71 SDTPVDTFCPRHLIGKN-----NIHITGLAYS----NTSEL-LISY-NDELVYLFEKNM------GLGPSPLSLSPEDLQ 133 (312)
Q Consensus 71 ~~~~~~~~~~~~~~~~~-----~~~i~~~~~~----~~~~~-l~s~-~d~~i~iwd~~~------~~~~~~~~~~~~~~~ 133 (312)
. .....+..| ...|.+++|+ |++.+ |+++ .|+.|++||+.+ +
T Consensus 106 ------~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------- 164 (397)
T 1sq9_A 106 ------K-VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS-------------- 164 (397)
T ss_dssp ------C-EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH--------------
T ss_pred ------c-ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc--------------
Confidence 0 001222556 5899999999 99998 8886 599999999987 4
Q ss_pred CCCCCc-----eEec-------ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec---C---ccceEE
Q 021484 134 KREEPQ-----VYSG-------HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG---D---RHVVNQ 195 (312)
Q Consensus 134 ~~~~~~-----~~~~-------~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---~---~~~v~~ 195 (312)
+.+. .+.+ |.. .+.+++| +|++ +|++++.||.|++||+++++++..+.. | ...|.+
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~-~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 165 --LTLNWSPTLELQGTVESPMTPSQ--FATSVDI-SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp --TTTCCCCEEEEEEEECCSSSSCC--CCCEEEE-CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred --ceeeccCcceeeeeeccccCCCC--CceEEEE-CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 3444 5644 454 4999999 8999 999999999999999999999999998 8 999999
Q ss_pred EEEcCCCCeEEEEeCC---CcEEEccCCCCCC-CCCCC-------------ChhhhhhhhccCCCCceeEEecCCceEEE
Q 021484 196 LEPHPHIPMFATCGIE---KTVKLWAPMPTDF-PPLPD-------------NAEKIMKANKQGREDHSRITLTPDVIMHV 258 (312)
Q Consensus 196 ~~~~p~~~~l~t~~~d---~~i~iwd~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 258 (312)
++|+|++++|++++.| +.|++||+++++. ..+.. |...+ ....+++++.++++++.|+.+++
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV-MSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE-EEEEECSSSSEEEEEETTSEEEE
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE-EEEEECCCCCEEEEEeCCCeEEE
Confidence 9999999999999999 9999999988763 44444 55555 44457888999999999999999
Q ss_pred EEeccc
Q 021484 259 LRLQRR 264 (312)
Q Consensus 259 ~~~~~~ 264 (312)
|++...
T Consensus 318 wd~~~~ 323 (397)
T 1sq9_A 318 WDVKTK 323 (397)
T ss_dssp EETTTT
T ss_pred EEcCCC
Confidence 998654
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=8.5e-30 Score=217.66 Aligned_cols=228 Identities=16% Similarity=0.243 Sum_probs=172.5
Q ss_pred eeecccCccceeeEEecccccCCcCCCCccceEEEEEcC-CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 2 WQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 2 ~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
++|++...+...++. +|..+|++++|+| ++ ++|++|+.||.|++||+.+++......... ... ..
T Consensus 26 ~v~~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~-~~ 91 (408)
T 4a11_B 26 RVLGLELNKDRDVER-----------IHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSYYTCKA-VCS-IG 91 (408)
T ss_dssp HHHTEEECTTEEECC-----------CCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSCEEECE-EEE-EC
T ss_pred eeeccccCcceeeee-----------ccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccceEeccc-ccc-cc
Confidence 566666555443332 3889999999999 77 899999999999999999876322110000 000 00
Q ss_pred cccccCCCccEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
.....+|...|.+++|+| ++.+|+++ .|+.|++||+.++ +....+. +... +.++.| .+
T Consensus 92 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------------~~~~~~~-~~~~--~~~~~~-~~ 151 (408)
T 4a11_B 92 RDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----------------QTADVFN-FEET--VYSHHM-SP 151 (408)
T ss_dssp TTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT----------------EEEEEEE-CSSC--EEEEEE-CS
T ss_pred ccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC----------------ccceecc-CCCc--eeeeEe-ec
Confidence 111145899999999999 66688886 5999999999887 5555555 4433 888888 66
Q ss_pred ---CCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCC--CCC------
Q 021484 159 ---NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTD--FPP------ 226 (312)
Q Consensus 159 ---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~--~~~------ 226 (312)
++.++++++.+|.|++||+++++.+..+..|...|.+++|+|+++. +++++.||.|++||++... ...
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 231 (408)
T 4a11_B 152 VSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNG 231 (408)
T ss_dssp SCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT
T ss_pred CCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccc
Confidence 4559999999999999999999999999999999999999999995 8999999999999997653 111
Q ss_pred ---------CCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 227 ---------LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 227 ---------~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
...|...+ ....+++++.++++++.|+.+++|++...
T Consensus 232 ~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 232 KKSQAVESANTAHNGKV-NGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp CSCCCTTTSSCSCSSCE-EEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ccceeeccccccccCce-eEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 12344444 44457788999999999999999998653
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.7e-30 Score=219.46 Aligned_cols=241 Identities=12% Similarity=0.050 Sum_probs=182.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+... +|...|.+++|+|++ ++|++++.|+.|++||+..++.. ...
T Consensus 76 i~vwd~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~-----------~~~ 134 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVIL---------RINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDW-----------WVC 134 (372)
T ss_dssp EEEEEEETTEEEEEEECC---------CCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTE-----------EEE
T ss_pred EEEEECCCCeeeeeEEee---------cCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcc-----------eee
Confidence 578998776543333321 378899999999998 89999999999999999876410 012
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCccc--ccCCCCCceEecccCCceeeEEEEec
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPED--LQKREEPQVYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~~s 157 (312)
......|...|.+++|+|++++|+++ .|+.|++||+.............+. ....+....+.+|... +.+++| +
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~ 211 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--VHGVCF-S 211 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--EEEEEE-C
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe--EEEEEE-C
Confidence 23336788999999999999988886 5999999997532110000000000 1122455666677755 999999 9
Q ss_pred CCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC--CC------------
Q 021484 158 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP--TD------------ 223 (312)
Q Consensus 158 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~--~~------------ 223 (312)
|++++|++++.|+.|++||+++++++..+..|...|.+++|+|++.+++++ .|+.|++|++.. +.
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 290 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ 290 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence 999999999999999999999999999999999999999999999988887 899999999877 31
Q ss_pred --------------------C-------CCC-CCChhhhhhhhccCCCC---ceeEEecCCceEEEEEecccCc
Q 021484 224 --------------------F-------PPL-PDNAEKIMKANKQGRED---HSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 224 --------------------~-------~~~-~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
. ..+ .+|...+....+.++++ .++++++.|+.|++|++...+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0 222 36677665555555666 8999999999999999876543
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.4e-30 Score=214.71 Aligned_cols=262 Identities=10% Similarity=0.086 Sum_probs=201.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|.+++|+|++ ++|++++.||.|++||+.++++.
T Consensus 56 i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-------------- 109 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLD-----------GHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQCV-------------- 109 (369)
T ss_dssp EEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEE--------------
T ss_pred EEEEeCCCchhhhhhh-----------hcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEE--------------
Confidence 5789888765433332 378899999999988 89999999999999999988632
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cC-----CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEE
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-ND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 154 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 154 (312)
..+ . +...+.+++|+|++++++++ .+ +.|++||+....... ............+..+.....+.+++
T Consensus 110 ~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 110 ATW-K-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH-----ELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp EEE-E-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC-----CEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred EEe-e-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce-----eecccccceeeeccCCcCccceeEEE
Confidence 222 2 67889999999999988886 47 999999998752110 00111112445555665523599999
Q ss_pred EecCCCCEEEEeccCceEEEEeccC-CeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhh
Q 021484 155 FFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEK 233 (312)
Q Consensus 155 ~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~ 233 (312)
| +|++++|++++.||.|++||+++ ++.+..+..|...|.+++|+|++++|++++.|+.|++||++++.......+...
T Consensus 183 ~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 261 (369)
T 3zwl_B 183 W-STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCP 261 (369)
T ss_dssp E-CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred E-cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCC
Confidence 9 99999999999999999999998 788889999999999999999999999999999999999998764222223333
Q ss_pred hhhhhccCCCCceeEEecCCc--------------eEEEEEecccCcc----------ceeEeecCCCccCCCCCCCeEE
Q 021484 234 IMKANKQGREDHSRITLTPDV--------------IMHVLRLQRRQTL----------AYRERRYNAADFESDEEEGETY 289 (312)
Q Consensus 234 ~~~~~~~~~~~~~l~s~~~d~--------------~i~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~ 289 (312)
+ ....+.+++.++++++.++ .+++|++...... ....+.+++..+.+...++.|.
T Consensus 262 ~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 262 L-NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp E-EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred c-eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 3 4455788889999988887 8999997554221 1236777888888888889999
Q ss_pred EeecCCCC
Q 021484 290 LLGFSDSD 297 (312)
Q Consensus 290 ~~~~~~~~ 297 (312)
+|++..+.
T Consensus 341 iw~~~~~~ 348 (369)
T 3zwl_B 341 LHHFEKSY 348 (369)
T ss_dssp EEEECHHH
T ss_pred EEECcccc
Confidence 99986653
No 67
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7.2e-30 Score=213.14 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=189.9
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc--CCCeEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLI 104 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~ 104 (312)
.+|...|++++|+|++ ++|++|+.||.|++||+.++... +.....+.+|...|.+++|+| ++++|+
T Consensus 8 ~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN-----------WELSDSWRAHDSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC-----------EEEEEEEECCSSCEEEEEECCGGGCSEEE
T ss_pred cccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc-----------ceecceeccCCCcEEEEEEcCCCCCCEEE
Confidence 4699999999999998 89999999999999999865310 011222367999999999999 588888
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC--CCEEEEeccCceEEEEeccCCe
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~--~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
++ .|+.|++||+.++..... ....+....+.+|... |.+++| +|+ +++|++++.||.|++||+++++
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~-------~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECS-------GRRWNKLCTLNDSKGS--LYSVKF-APAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTS-------SCSEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEcCCCeEEEEecCCCccccc-------ccCcceeeeecccCCc--eeEEEE-cCCCCCcEEEEecCCCcEEEecCCChH
Confidence 86 599999999987521000 0001235566677765 999999 899 9999999999999999998876
Q ss_pred eEEEee-------------cCccceEEEEEcCC---CCeEEEEeCCCcEEEccCCCCC---CCCCCCChhhhhhhhccCC
Q 021484 182 LVRLMV-------------GDRHVVNQLEPHPH---IPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGR 242 (312)
Q Consensus 182 ~~~~~~-------------~~~~~v~~~~~~p~---~~~l~t~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (312)
.+..+. .|...+.+++|+|+ +..+++++.|+.+.+|+...+. ...+.+|...+. ...+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~~~~~p 224 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIR-SISWAP 224 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEE-EEEECC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCccee-EEEECC
Confidence 543332 57788999999997 8899999999999888877765 345556666664 444677
Q ss_pred CC----ceeEEecCCceEEEEEecccC-----------------------------------------------------
Q 021484 243 ED----HSRITLTPDVIMHVLRLQRRQ----------------------------------------------------- 265 (312)
Q Consensus 243 ~~----~~l~s~~~d~~i~i~~~~~~~----------------------------------------------------- 265 (312)
++ .++++++.|+.+++|+++...
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD 304 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec
Confidence 76 799999999999999987631
Q ss_pred --ccce-eEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 266 --TLAY-RERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 266 --~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..+. ..+.+++..+.+...++.|.+|+++.+.
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 1111 2667777888888888889999886543
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.7e-30 Score=220.82 Aligned_cols=217 Identities=14% Similarity=0.161 Sum_probs=164.9
Q ss_pred cceEEEEEcCCCC-cEEEEEeCCCeEEEEEccCCeecCC-CC---------CCCCcccc---------------cccccc
Q 021484 31 IRLNAIVIDPRNP-NYFAVGGSDEYARVYDIRKCHWYSP-IS---------SDTPVDTF---------------CPRHLI 84 (312)
Q Consensus 31 ~~v~~~~~~p~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-~~---------~~~~~~~~---------------~~~~~~ 84 (312)
.+|++++|+|++. .+|++++.|+.|++||+.+++.... .. ....+..+ +...+.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 7899999999863 4899999999999999987553210 00 00000000 011223
Q ss_pred cCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCc-------eEecccCCceeeEEEEec
Q 021484 85 GKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ-------VYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 85 ~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~v~~~s 157 (312)
.+|...|.+++|+|++++|+++.|+.|++||+.+.. +... .+.+|... |.+++| +
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~---------------~~~~~~~~~~~~~~~~~~~--v~~~~~-~ 235 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITD---------------RSFNIVDIKPANMEELTEV--ITAAEF-H 235 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEE---------------EEEEEEECCCSSGGGCCCC--EEEEEE-C
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCC---------------ceeeeeecccccccccCcc--eEEEEE-C
Confidence 679999999999999999999899999999998431 2222 24567655 999999 8
Q ss_pred CCC-CEEEEeccCceEEEEeccCCee----EEEeecCcc------------ceEEEEEcCCCCeEEEEeCCCcEEEccCC
Q 021484 158 PND-EYVMSGSDCGHLFIWKKKGGKL----VRLMVGDRH------------VVNQLEPHPHIPMFATCGIEKTVKLWAPM 220 (312)
Q Consensus 158 ~~~-~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~------------~v~~~~~~p~~~~l~t~~~d~~i~iwd~~ 220 (312)
|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++||++
T Consensus 236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 236 PNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred CCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 998 9999999999999999999886 778888876 8999999999999999998 999999998
Q ss_pred C-CC-CCCCCCChhhhhh--------------hhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 221 P-TD-FPPLPDNAEKIMK--------------ANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 221 ~-~~-~~~~~~~~~~~~~--------------~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
. +. +..+..|...... ...+++++.++++++.|+.+++|++.....
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 315 MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 6 44 4555555432211 145788999999999999999999876643
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.5e-30 Score=217.84 Aligned_cols=238 Identities=12% Similarity=0.163 Sum_probs=184.5
Q ss_pred CCccceEEEEEcCC---CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC----C
Q 021484 28 MNSIRLNAIVIDPR---NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----S 100 (312)
Q Consensus 28 ~h~~~v~~~~~~p~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~ 100 (312)
+|..+|++++|+|+ +...+++++.++.|++||+.+++.. ..+.. .....|...|.+++|+|+ +
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~---------~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 85 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI---------RLLQS-YVDADADENFYTCAWTYDSNTSH 85 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE---------EEEEE-EECSCTTCCEEEEEEEECTTTCC
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE---------Eeeee-ccccCCCCcEEEEEeccCCCCCC
Confidence 58999999999984 4356777777889999999977522 11111 111236788999999999 5
Q ss_pred CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEecc
Q 021484 101 ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKK 178 (312)
Q Consensus 101 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~ 178 (312)
.+|+++ .|+.|++||+.++ +.+..+.+|... |.+++| +| ++++|++++.||.|++||++
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITM----------------QCIKHYVGHGNA--INELKF-HPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp EEEEEEETTCEEEEECTTTC----------------CEEEEEESCCSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETT
T ss_pred CEEEEecCCCEEEEEEchhc----------------eEeeeecCCCCc--EEEEEE-CCCCCCEEEEEeCCCeEEEEEee
Confidence 678886 6999999999887 678888888866 999999 88 89999999999999999999
Q ss_pred CCeeEEEe---ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCC-CC---------------------------
Q 021484 179 GGKLVRLM---VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PL--------------------------- 227 (312)
Q Consensus 179 ~~~~~~~~---~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~--------------------------- 227 (312)
+++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.. .+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 99998888 679999999999999999999999999999999865321 00
Q ss_pred -CCChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc------------------------cceeEeecC--CCccC
Q 021484 228 -PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT------------------------LAYRERRYN--AADFE 280 (312)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~------------------------~~~~~~~~~--~~~~~ 280 (312)
..|...+.... +. +.++++++.|+.+++|++..... .....+.++ +..+.
T Consensus 227 ~~~~~~~v~~~~-~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 227 RDIHRNYVDCVR-WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp CSSCSSCCCEEE-EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred ccCCcceEEEEE-Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 01333332222 22 67999999999999999876532 001134455 77788
Q ss_pred CCCCCCeEEEeecCCCC
Q 021484 281 SDEEEGETYLLGFSDSD 297 (312)
Q Consensus 281 ~~~~~~~v~~~~~~~~~ 297 (312)
+...++.|++++...+.
T Consensus 304 ~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVED 320 (366)
T ss_dssp EECTTSCEEEEECCSSS
T ss_pred EEecCCcEEEEECCCCC
Confidence 88888899999987764
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=6.3e-30 Score=213.51 Aligned_cols=233 Identities=12% Similarity=0.140 Sum_probs=175.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.+........ ... .+|..+|++++|+|. + ++|++++.||.|++||+.+++.... ...+
T Consensus 35 i~iw~~~~~~~~~~~~-~~~------~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~------~~~~ 100 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELS-DSW------RAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS------GRRW 100 (351)
T ss_dssp EEEEEECSSSCCEEEE-EEE------ECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS------SCSE
T ss_pred EEEEECCCCCCcceec-cee------ccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc------ccCc
Confidence 5789988654321111 111 238899999999994 6 8999999999999999987642111 0001
Q ss_pred cccccccCCCccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-------------
Q 021484 79 CPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS------------- 142 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 142 (312)
.....+..|...|.+++|+|+ +.+|+++ .|+.|++||+.++ +....+.
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP----------------SDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST----------------TCTTCCEEEEEEESCSCCCS
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh----------------HHhccccccccccccccccC
Confidence 112223678999999999999 8888886 6999999999876 2222221
Q ss_pred cccCCceeeEEEEecCC---CCEEEEeccCceEEEEeccCCee--EEEeecCccceEEEEEcCCC----CeEEEEeCCCc
Q 021484 143 GHRNSQTVKGVNFFGPN---DEYVMSGSDCGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHI----PMFATCGIEKT 213 (312)
Q Consensus 143 ~~~~~~~v~~v~~~s~~---~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~~----~~l~t~~~d~~ 213 (312)
.+... +.+++| +|+ +.++++++.++.+.+|+...++. +..+.+|...|++++|+|++ ++|++++.||.
T Consensus 165 ~~~~~--~~~~~~-~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 165 NHLQS--DFCLSW-CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCSCC--CEEEEE-CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred Ccccc--eeEEEe-ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 34433 899999 886 99999999999998888877765 67778899999999999998 78999999999
Q ss_pred EEEccCCCCC-----------------------------------------------CCCCCCChhhhhhhhccCCCCce
Q 021484 214 VKLWAPMPTD-----------------------------------------------FPPLPDNAEKIMKANKQGREDHS 246 (312)
Q Consensus 214 i~iwd~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
|++||++... +..+.+|...+ ....+++++.+
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~ 320 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV-WSVSWNLTGTI 320 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE-EEEEECSSSCC
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE-EEEEEcCCCCE
Confidence 9999987641 12233444554 44457888999
Q ss_pred eEEecCCceEEEEEecccCcc
Q 021484 247 RITLTPDVIMHVLRLQRRQTL 267 (312)
Q Consensus 247 l~s~~~d~~i~i~~~~~~~~~ 267 (312)
+++++.|+.+++|++......
T Consensus 321 l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCE
T ss_pred EEEecCCCcEEEEecCcCcch
Confidence 999999999999999876544
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=214.86 Aligned_cols=224 Identities=11% Similarity=0.144 Sum_probs=175.6
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.......+... .+|..+|++++|+|+ + ++|++++.||.|++||+.+++.
T Consensus 35 i~iw~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~------------- 91 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRW------------- 91 (379)
T ss_dssp EEEEEEETTEEEEEEEE---------CCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEE-------------
T ss_pred EEEEecCCCcceeeeEe---------cCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCce-------------
Confidence 57888874433222222 248899999999976 6 8999999999999999998752
Q ss_pred cccccccCCCccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
........|...|.+++|+|+ +.+|+++ .|+.|++||+.+.. ......+..|... |.+++|
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--------------~~~~~~~~~~~~~--v~~~~~ 155 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW 155 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS--------------CCCEEEEECCTTC--EEEEEE
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC--------------ceeeEEecCCCCc--eEEEEE
Confidence 122223678899999999999 8888886 69999999998751 0233345667755 999999
Q ss_pred ecC-------------CCCEEEEeccCceEEEEeccCCe----eEEEeecCccceEEEEEcCC---CCeEEEEeCCCcEE
Q 021484 156 FGP-------------NDEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPH---IPMFATCGIEKTVK 215 (312)
Q Consensus 156 ~s~-------------~~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~---~~~l~t~~~d~~i~ 215 (312)
+| ++.+|++++.||.|++||+++++ ....+.+|...|.+++|+|+ +.+|++++.||.|+
T Consensus 156 -~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 156 -APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp -CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred -cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEE
Confidence 88 69999999999999999998764 45677789999999999999 89999999999999
Q ss_pred EccCCCCC------CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 216 LWAPMPTD------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 216 iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
+||+.... ......+...+ ....+++++.++++++.|+.+++|++....
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCE-EEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEeCCCCCccceeeeeccccCCCcE-EEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 99998763 12222244444 445588899999999999999999998653
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=6.2e-30 Score=221.42 Aligned_cols=259 Identities=10% Similarity=0.118 Sum_probs=184.0
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCC------------ccEEEEEE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN------------IHITGLAY 96 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~ 96 (312)
|...|++++|+|++ ++|++|+.||.|++|++.+++..... ....+.....+.+|. ..|.+++|
T Consensus 27 ~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~----~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 27 EADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSH----SRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp GGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CC----CCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred ccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcc----cccceeEecccccccccccccccccccCceEEEEE
Confidence 67899999999998 89999999999999999876521100 001111222336777 88999999
Q ss_pred ccCC--CeEEEe-cCCcEEEEEcCCCcCCC-----------------CCcCCccccc------CCCCCce-EecccCCce
Q 021484 97 SNTS--ELLISY-NDELVYLFEKNMGLGPS-----------------PLSLSPEDLQ------KREEPQV-YSGHRNSQT 149 (312)
Q Consensus 97 ~~~~--~~l~s~-~d~~i~iwd~~~~~~~~-----------------~~~~~~~~~~------~~~~~~~-~~~~~~~~~ 149 (312)
+|++ .+|+++ .|+.|++||+.++.... ...+....+. .....+. ..+|...
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-- 179 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH-- 179 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC--
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc--
Confidence 9998 677775 69999999997632100 0000000000 0000112 2467755
Q ss_pred eeEEEEecCCCCEEEEeccCceEEEEeccC-CeeEEE-------eecCccceEEEEEcCCC-CeEEEEeCCCcEEEccCC
Q 021484 150 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRL-------MVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPM 220 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~-------~~~~~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~ 220 (312)
|.+++| +|++++|++| .|+.|++||+++ ++.+.. +.+|...|.+++|+|++ .+|++++.||+|++||++
T Consensus 180 v~~~~~-~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISI-NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEE-CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEE-cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 999999 9999999999 799999999984 444442 45789999999999998 899999999999999998
Q ss_pred CCCC-----CCCCCChhh-----------hhhhhccCCCCceeEEecCCceEEEEEecc-cCccc-e-------------
Q 021484 221 PTDF-----PPLPDNAEK-----------IMKANKQGREDHSRITLTPDVIMHVLRLQR-RQTLA-Y------------- 269 (312)
Q Consensus 221 ~~~~-----~~~~~~~~~-----------~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~-~~~~~-~------------- 269 (312)
++.. ..+..+... .+....+++++.++++++. +.+++||++. ..... +
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccc
Confidence 8764 344445441 3455567889999999999 9999999875 22111 1
Q ss_pred -----------eEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 270 -----------RERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 270 -----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..+.+++..+.+...++.|++||+..+.
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 3577888888888899999999997764
No 73
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-30 Score=221.94 Aligned_cols=240 Identities=7% Similarity=0.143 Sum_probs=180.1
Q ss_pred CCccceEEEEEcC-CCCcEEEEEeCCCeEEEEEccC---CeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeE
Q 021484 28 MNSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRK---CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 103 (312)
Q Consensus 28 ~h~~~v~~~~~~p-~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 103 (312)
+|..+|++++|+| ++ .+|++|+.||+|++||+.+ +... . ......|...|.+++|+|++.+|
T Consensus 61 ~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~------------~-~~~~~~h~~~v~~~~~~~~~~~l 126 (437)
T 3gre_A 61 NEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVY------------S-SSLTYDCSSTVTQITMIPNFDAF 126 (437)
T ss_dssp TTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCC------------S-CSEEEECSSCEEEEEECTTSSEE
T ss_pred CCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCccc------------c-eeeeccCCCCEEEEEEeCCCCEE
Confidence 5899999999999 87 8999999999999999986 3210 0 11112589999999999999988
Q ss_pred EEe-cCCcEEEEEcC---CCcCCCCCcCCcccccCCCCCceEecc--------c--CCceeeEEEE-ecCCCCEEEEecc
Q 021484 104 ISY-NDELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYSGH--------R--NSQTVKGVNF-FGPNDEYVMSGSD 168 (312)
Q Consensus 104 ~s~-~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~v~~v~~-~s~~~~~l~~~~~ 168 (312)
+++ .|+.|++||+. .+ +....+.++ . ....+.++.+ .++++++|++++.
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQE----------------SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp EEEETTSEEEEEEEEEEEET----------------TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred EEEeCCCEEEEEEeccccCC----------------ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 886 59999999995 33 222222222 1 1223566653 1678999999999
Q ss_pred CceEEEEeccCCeeEEEeec--CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCC-CChhhhhhhh---ccC
Q 021484 169 CGHLFIWKKKGGKLVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP-DNAEKIMKAN---KQG 241 (312)
Q Consensus 169 dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~---~~~ 241 (312)
||.|++||+++++++..+.. |...|++++|+|++++|++++.||+|++||++.+.. ..+. .+...+.... .++
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s 270 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYG 270 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTC
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccC
Confidence 99999999999999999988 889999999999999999999999999999998764 3332 3444443332 244
Q ss_pred CCCceeEEecCCceEEEEEecccCcccee------------------------------------EeecCCCccCCCCCC
Q 021484 242 REDHSRITLTPDVIMHVLRLQRRQTLAYR------------------------------------ERRYNAADFESDEEE 285 (312)
Q Consensus 242 ~~~~~l~s~~~d~~i~i~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~ 285 (312)
+++.++++++.|+.+++||+......... .+. +...+.+...+
T Consensus 271 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d 349 (437)
T 3gre_A 271 KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEAT 349 (437)
T ss_dssp TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGG
T ss_pred CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCC
Confidence 56789999999999999998754321111 222 23456677778
Q ss_pred CeEEEeecCCCCC
Q 021484 286 GETYLLGFSDSDA 298 (312)
Q Consensus 286 ~~v~~~~~~~~~~ 298 (312)
+.|.+||+..+..
T Consensus 350 ~~i~~wd~~~~~~ 362 (437)
T 3gre_A 350 SSIVMFSLNELSS 362 (437)
T ss_dssp TEEEEEETTCGGG
T ss_pred CeEEEEECCCccc
Confidence 8999999877653
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=7.1e-30 Score=236.93 Aligned_cols=235 Identities=17% Similarity=0.241 Sum_probs=194.6
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|..+|++++|+|++ .+|++++.||.|++||+.+++. ...+ ..|...|.+++|+|++++|+++
T Consensus 11 ~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~--------------~~~~-~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVE--------------VRSI-QVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp EECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--------------EEEE-ECCSSCEEEEEEEGGGTEEEEEE
T ss_pred cCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCce--------------EEEE-ecCCCcEEEEEEeCCCCEEEEEe
Confidence 488899999999999 7999999999999999998862 2222 6789999999999999988886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC-eeEEE
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRL 185 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~ 185 (312)
.|+.|++||+.++ +....+.+|... |.+++| +|++++|++++.||.|++||+.++ .....
T Consensus 75 ~dg~i~vw~~~~~----------------~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 75 DDFRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp TTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred CCCeEEEEECCCC----------------cEEEEEecCCCC--EEEEEE-eCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 5999999999887 777888888866 999999 999999999999999999999987 77788
Q ss_pred eecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCC--CCceeEEecCCceEEEEEe
Q 021484 186 MVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGR--EDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~i~~~ 261 (312)
+.+|...|.+++|+| ++..+++++.||+|++||+.+... ..+..+....+....+.+ ++.++++++.|+.+++|++
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEET
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 889999999999999 888999999999999999987653 333333323334445666 8889999999999999997
Q ss_pred cccCc----------cceeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 262 QRRQT----------LAYRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 262 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..... .....+.|++..+.+...++.+.+++...+.
T Consensus 216 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 65421 1122567777778888888889999987653
No 75
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.6e-29 Score=217.48 Aligned_cols=251 Identities=14% Similarity=0.210 Sum_probs=195.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+.+.+...++... +|...|++++|+|++ ++|++|+.||+|++||+.++++ .
T Consensus 127 V~lWd~~tg~~~~~~~~~---------~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~--------------~ 182 (420)
T 4gga_A 127 VYLWSASSGDILQLLQME---------QPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR--------------L 182 (420)
T ss_dssp EEEEETTTCCEEEEEECC---------STTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------------E
T ss_pred EEEEECCCCCEEEEEEec---------CCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcE--------------E
Confidence 689999988766666542 377889999999999 8999999999999999998873 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
... .+|...+.+++++ +.+|+++ .|+.+++||..... ..+..+.+|... +..+.| +++
T Consensus 183 ~~~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~---------------~~~~~~~~h~~~--~~~~~~-~~~ 241 (420)
T 4gga_A 183 RNM-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE---------------HHVATLSGHSQE--VCGLRW-APD 241 (420)
T ss_dssp EEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE-CTT
T ss_pred EEE-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc---------------eeeEEecccccc--eeeeee-cCC
Confidence 222 7889999988775 5688886 59999999987652 455678888866 999998 999
Q ss_pred CCEEEEeccCceEEEEeccCCe----eEEEeecCccceEEEEEcCCCCe-EEEE--eCCCcEEEccCCCCCCCCCCCChh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGK----LVRLMVGDRHVVNQLEPHPHIPM-FATC--GIEKTVKLWAPMPTDFPPLPDNAE 232 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~~~~-l~t~--~~d~~i~iwd~~~~~~~~~~~~~~ 232 (312)
++++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+.. ++++ +.|++|++||+.++..........
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~ 321 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS 321 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc
Confidence 9999999999999999998765 35666788999999999997765 5543 479999999999876422222333
Q ss_pred hhhhhhccCCCCceeEEe--cCCceEEEEEecccCcc---------c-eeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 233 KIMKANKQGREDHSRITL--TPDVIMHVLRLQRRQTL---------A-YRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~--~~d~~i~i~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
.+.... +.+++..++++ ..|+.|++|++.+.... + ...++|++..+.+...++.|.+|++.+.+
T Consensus 322 ~v~~~~-~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 322 QVCSIL-WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CEEEEE-EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred ceeeee-ecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 343333 55666666554 47899999998654322 2 23778899999999999999999987654
No 76
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=3.2e-29 Score=209.11 Aligned_cols=235 Identities=14% Similarity=0.203 Sum_probs=171.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCC--------
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSD-------- 72 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------- 72 (312)
|+|||+++.+.......... .+|...|.+++|+|++ ++|++++.|+.|++|+.............
T Consensus 63 i~vWd~~~~~~~~~~~~~~l------~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 63 IIMWKLTRDETNYGIPQRAL------RGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp EEEEEECCSSSCSEEEEEEE------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCcccceeeEEE------eCCCCCEEEEEECCCC-CEEEEEcccccceEEeecccceeeeecCCCCceeEEE
Confidence 68999987654333222222 2589999999999999 89999999999999999876543211100
Q ss_pred --------------CCccccccc------ccccCCCccEEEEEEccCCC--eEEEe-cCCcEEEEEcCCCcCCCCCcCCc
Q 021484 73 --------------TPVDTFCPR------HLIGKNNIHITGLAYSNTSE--LLISY-NDELVYLFEKNMGLGPSPLSLSP 129 (312)
Q Consensus 73 --------------~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~--~l~s~-~d~~i~iwd~~~~~~~~~~~~~~ 129 (312)
..+..+... ....+|...+..++|++++. +++++ .|+.|++||+.++
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---------- 205 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---------- 205 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT----------
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC----------
Confidence 000000000 11235667777888877653 55554 4788888888776
Q ss_pred ccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe
Q 021484 130 EDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~ 209 (312)
+....+.+|... |.+++| +|++++|++|+.||.|++||+++.+++..+..+ ..|..+.|+|++.++ +++
T Consensus 206 ------~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~ 274 (340)
T 4aow_A 206 ------KLKTNHIGHTGY--LNTVTV-SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAA 274 (340)
T ss_dssp ------EEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEE
T ss_pred ------ceeeEecCCCCc--EEEEEE-CCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCcee-ecc
Confidence 677888888866 999999 999999999999999999999999999888754 689999999987655 556
Q ss_pred CCCcEEEccCCCCCC----------CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 210 IEKTVKLWAPMPTDF----------PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 210 ~d~~i~iwd~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.|+.|++||+++... .....|...+ ....+++++.+|++++.|+.|++|++.++
T Consensus 275 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 275 TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC-TSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp ETTEEEEEETTTTEEEEEECCC-------CCCCCE-EEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCCEEEEEECCCCeEEEeccccceeeeccCCCCCE-EEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 799999999986531 1122344555 34457889999999999999999999875
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=6e-30 Score=218.14 Aligned_cols=203 Identities=13% Similarity=0.138 Sum_probs=164.5
Q ss_pred ccceEEEEEc----CCCCcE-EEEEeCCCeEEEEEccC------CeecCCCCCCCCccccccc-cc------ccCCCccE
Q 021484 30 SIRLNAIVID----PRNPNY-FAVGGSDEYARVYDIRK------CHWYSPISSDTPVDTFCPR-HL------IGKNNIHI 91 (312)
Q Consensus 30 ~~~v~~~~~~----p~~~~~-l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~i 91 (312)
...|.+++|+ |++ .+ |++++.||.|++||+.+ ++... +.+. .+ ...|...|
T Consensus 121 ~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i 189 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLN----------WSPTLELQGTVESPMTPSQFA 189 (397)
T ss_dssp GSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC----------CCCEEEEEEEECCSSSSCCCC
T ss_pred CCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccceee----------ccCcceeeeeeccccCCCCCc
Confidence 5889999999 988 67 99999999999999997 44211 0111 11 14578899
Q ss_pred EEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec---c---cCCceeeEEEEecCCCCEEE
Q 021484 92 TGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG---H---RNSQTVKGVNFFGPNDEYVM 164 (312)
Q Consensus 92 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~v~~v~~~s~~~~~l~ 164 (312)
.+++|+|++ +++++ .|+.|++||++++ +.+..+.. | ... +.+++| +|++++|+
T Consensus 190 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~----------------~~~~~~~~~~~h~~~~~~--i~~i~~-~~~~~~l~ 249 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNNGTVQISELSTL----------------RPLYNFESQHSMINNSNS--IRSVKF-SPQGSLLA 249 (397)
T ss_dssp CEEEECTTS-EEEEECTTSEEEEEETTTT----------------EEEEEEECCC---CCCCC--EEEEEE-CSSTTEEE
T ss_pred eEEEECCCc-eEEEEeCCCcEEEEECCCC----------------ceeEEEeccccccccCCc--cceEEE-CCCCCEEE
Confidence 999999999 88887 5999999999887 67778887 7 655 999999 99999999
Q ss_pred EeccC---ceEEEEeccCCeeEEEeec-------------CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCC
Q 021484 165 SGSDC---GHLFIWKKKGGKLVRLMVG-------------DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL 227 (312)
Q Consensus 165 ~~~~d---g~v~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~ 227 (312)
+++.| |.|++||+++++++..+.. |...|.+++|+|++++|++++.|+.|++||+.+++. ..+
T Consensus 250 ~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 99999 9999999999999999988 999999999999999999999999999999987753 333
Q ss_pred C------CC---------------hhhhhhhhccCCCC----------ceeEEecCCceEEEEEeccc
Q 021484 228 P------DN---------------AEKIMKANKQGRED----------HSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 228 ~------~~---------------~~~~~~~~~~~~~~----------~~l~s~~~d~~i~i~~~~~~ 264 (312)
. .| ...+ ....+.+++ .++++++.|+.|++|++..+
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v-~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGV-FDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCE-EEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ecccCcccchhhhhccccccccccCCce-eEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 3 34 4444 344466766 79999999999999998754
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=215.54 Aligned_cols=239 Identities=10% Similarity=0.080 Sum_probs=187.1
Q ss_pred CCccceEEEEEcCCCCcEEEEEeC---CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC---CC
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT---SE 101 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 101 (312)
+|..+|++++|+|++..++++|+. |+.|++||+.+++. .......|...|.+++|+|+ +.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--------------KLLREIEKAKPIKCGTFGATSLQQR 81 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--------------EEEEEEEESSCEEEEECTTCCTTTC
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--------------cceeeecccCcEEEEEEcCCCCCCc
Confidence 388999999999998667777776 99999999998762 22222468899999999998 68
Q ss_pred eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCC-CCceEecccCCceeeEEEEe-----cCCCCEEEEeccCceEEE
Q 021484 102 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFF-----GPNDEYVMSGSDCGHLFI 174 (312)
Q Consensus 102 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~-----s~~~~~l~~~~~dg~v~i 174 (312)
+|+++ .|+.|++||+.++ + ....+.+|... |.+++|. ++++++|++++.||.|++
T Consensus 82 ~l~~~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAP----------------EMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp CEEEEETTSCEEEECTTSC----------------SSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred eEEEecCCCeEEEEeCCCC----------------CccEEEEEecccc--eEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 88886 5999999999887 4 77888888866 9999552 688999999999999999
Q ss_pred EeccCCe-eEEEeecCcc----ceEEEE----EcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCC---
Q 021484 175 WKKKGGK-LVRLMVGDRH----VVNQLE----PHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR--- 242 (312)
Q Consensus 175 wd~~~~~-~~~~~~~~~~----~v~~~~----~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--- 242 (312)
||+++++ ++..+..|.+ .+.+++ |+|+++++++++.|+.|++||+++++......+...+ ....+++
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v-~~~~~~~~~~ 222 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV-CSLEFDRKDI 222 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEESCSSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCce-EEEEcCCCCC
Confidence 9999886 6777766554 788888 7899999999999999999999988754333444444 4445666
Q ss_pred CCceeEEecCCceEEEEEecccCcc--------------ce-eEeecCCC-ccCCCCCCCeEEEeecCCCCCC
Q 021484 243 EDHSRITLTPDVIMHVLRLQRRQTL--------------AY-RERRYNAA-DFESDEEEGETYLLGFSDSDAS 299 (312)
Q Consensus 243 ~~~~l~s~~~d~~i~i~~~~~~~~~--------------~~-~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~ 299 (312)
++.++++++.|+.+++|+++..... +. ..+.|+.. .+.+...++.+.+++...+...
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 7899999999999999998654322 11 25566666 6777888889999998765433
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-29 Score=210.95 Aligned_cols=223 Identities=9% Similarity=-0.030 Sum_probs=165.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. ...|.++.|+|. +++++.|++|++|+.............. ..
T Consensus 60 v~iwd~~~~~~~~~~~-------------~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~-----~~ 117 (343)
T 3lrv_A 60 LHFTQLKDSKTITTIT-------------TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNK-----VL 117 (343)
T ss_dssp EEEEEESSSSCEEEEE-------------EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCC-----EE
T ss_pred EEEEECCCCcEEEEEe-------------cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcc-----ee
Confidence 5789998776544443 125778888885 8999999999999877432111111111 11
Q ss_pred cccccCCCccEEEEEEcc--CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec
Q 021484 81 RHLIGKNNIHITGLAYSN--TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s 157 (312)
......|...|.+++|+| ++++++++ .|+.|++||+.++ +....+..+.. ..+.+++| +
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~----------------~~~~~~~~~~~-~~i~~~~~-~ 179 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD----------------SQYIVHSAKSD-VEYSSGVL-H 179 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS----------------CEEEEECCCSS-CCCCEEEE-C
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC----------------cEEEEEecCCC-CceEEEEE-C
Confidence 122246678899999999 99999986 5999999999887 45444433332 23999999 9
Q ss_pred CCCCEEEEeccCceEEEEeccCCeeE-EEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCC---Ch
Q 021484 158 PNDEYVMSGSDCGHLFIWKKKGGKLV-RLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD---NA 231 (312)
Q Consensus 158 ~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~---~~ 231 (312)
|++++|++|+.||.|++||+++++.+ ..+.. |..+|++++|+|++.+|++++ |++|++||+++... ..+.. +.
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~ 258 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPE 258 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC--
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccc
Confidence 99999999999999999999999887 78887 999999999999999999999 55999999998764 33332 22
Q ss_pred hhhh-hhhccCCCCceeEEecC-CceEEEEEeccc
Q 021484 232 EKIM-KANKQGREDHSRITLTP-DVIMHVLRLQRR 264 (312)
Q Consensus 232 ~~~~-~~~~~~~~~~~l~s~~~-d~~i~i~~~~~~ 264 (312)
..+- ....+++++.++++++. |+.+++|++...
T Consensus 259 ~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 259 FKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp ---CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 2221 13557888999999888 999999998654
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=215.89 Aligned_cols=214 Identities=12% Similarity=0.137 Sum_probs=174.6
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCC----------------cccc-------------
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP----------------VDTF------------- 78 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~~------------- 78 (312)
+|..+|.+++|+|++ ++|++++.|+.|++||+.+++.......... +...
T Consensus 147 ~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (425)
T 1r5m_A 147 FHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP 225 (425)
T ss_dssp CCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG
T ss_pred CCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC
Confidence 378899999999998 7999999999999999988876543322111 1000
Q ss_pred ------------cccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc
Q 021484 79 ------------CPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR 145 (312)
Q Consensus 79 ------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (312)
.....+..|...|.+++|+|++++|+++ .|+.|++||+.++ +....+.+|.
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----------------~~~~~~~~~~ 289 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG----------------NSQNCFYGHS 289 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB----------------SCSEEECCCS
T ss_pred CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC----------------ccceEecCCC
Confidence 0112235788999999999999988886 5999999999887 6778888887
Q ss_pred CCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC--
Q 021484 146 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-- 223 (312)
Q Consensus 146 ~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-- 223 (312)
.. +.+++| +|++ ++++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+.+..
T Consensus 290 ~~--i~~~~~-~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 290 QS--IVSASW-VGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSK 365 (425)
T ss_dssp SC--EEEEEE-ETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-
T ss_pred cc--EEEEEE-CCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccc
Confidence 66 999999 8888 99999999999999999999999999999999999999999999999999999999987654
Q ss_pred -------------------CCCCCCChhh-hhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 224 -------------------FPPLPDNAEK-IMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 224 -------------------~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
+..+..+... .+....+++++.++++++.|+.+++|++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 2344445442 33455578888899999999999999874
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.3e-29 Score=217.06 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=188.0
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~ 106 (312)
+|...|++++|+|+++.+|++++.||.|++|++.+...... +.........+.+|...|.+++|+|++. +|+++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----PSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----TTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----ccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 38899999999998558999999999999999986321000 0000122223368899999999999998 88887
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCC---e
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGG---K 181 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~---~ 181 (312)
.||.|++|++..+... .........+.+|... |.+++| +| ++.+|++++.||.|++||++++ +
T Consensus 201 ~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~h~~~--v~~v~~-~p~~~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 201 SDDHTICLWDINATPKE---------HRVIDAKNIFTGHTAV--VEDVAW-HLLHESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp CTTSCEEEEETTSCCBG---------GGEEECSEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eCCCeEEEEeCCCCCCC---------CceeccceeecCCCCC--EeeeEE-eCCCCCEEEEEeCCCeEEEEECCCCCCCc
Confidence 5999999999874100 0000124556677765 999999 77 7889999999999999999987 5
Q ss_pred eEEEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCCC--CCCCCCChhhhhhhhccCCCC-ceeEEecCCceEE
Q 021484 182 LVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD--FPPLPDNAEKIMKANKQGRED-HSRITLTPDVIMH 257 (312)
Q Consensus 182 ~~~~~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~ 257 (312)
++..+..|...|++++|+|+++ ++++++.||+|++||++... +..+..|...+... .+++++ .++++++.|+.++
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i-~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV-QWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE-EECSSCTTEEEEEETTSCCE
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE-EECCCCCCEEEEEeCCCcEE
Confidence 7778889999999999999998 58899999999999998743 45555566666444 466655 5789999999999
Q ss_pred EEEecccC-------------c-----------cceeEeecCCC-ccCCCCCCCeEEEeecCCC
Q 021484 258 VLRLQRRQ-------------T-----------LAYRERRYNAA-DFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 258 i~~~~~~~-------------~-----------~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~ 296 (312)
+|++.... . .....+.++.. .+.+...++.|.+|++..+
T Consensus 348 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99997621 0 11125566666 6777778888999987654
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-29 Score=209.88 Aligned_cols=202 Identities=11% Similarity=0.090 Sum_probs=168.1
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.+|..+|++++|+|++ ++|++++.||.|++||+.+++. ... +..|...|.+++|+|++++|+++
T Consensus 29 ~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~--------------~~~-~~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGER--------------LGT-LDGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp ECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCCE--------------EEE-ECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCchh--------------hhh-hhhcCCcEEEEEEcCCCCEEEEE
Confidence 3699999999999998 8999999999999999998762 222 26789999999999999988886
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC-----ceEEEEeccCC
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-----GHLFIWKKKGG 180 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d-----g~v~iwd~~~~ 180 (312)
.|+.|++||+.++ +....+. +... +.+++| +|++++|++++.+ +.|++||+..+
T Consensus 93 ~~dg~i~iwd~~~~----------------~~~~~~~-~~~~--v~~~~~-~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 93 SADYSIKLWDVSNG----------------QCVATWK-SPVP--VKRVEF-SPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ETTTEEEEEETTTC----------------CEEEEEE-CSSC--EEEEEE-CTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred eCCCeEEEEECCCC----------------cEEEEee-cCCC--eEEEEE-ccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 5999999999887 5666666 5544 999999 9999999999998 99999998765
Q ss_pred e-----------eEEEeecCcc--ceEEEEEcCCCCeEEEEeCCCcEEEccCCC-CC-CCCCCCChhhhhhhhccCCCCc
Q 021484 181 K-----------LVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TD-FPPLPDNAEKIMKANKQGREDH 245 (312)
Q Consensus 181 ~-----------~~~~~~~~~~--~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
. .+..+..|.. .+.+++|+|++++|++++.||.|++||+++ .. ...+..+...+ ....+++++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-~~~~~~~~~~ 231 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI-SDMQFSPDLT 231 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE-EEEEECTTSS
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce-eEEEECCCCC
Confidence 3 3445556665 899999999999999999999999999987 33 34444455555 4445788899
Q ss_pred eeEEecCCceEEEEEecccC
Q 021484 246 SRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 246 ~l~s~~~d~~i~i~~~~~~~ 265 (312)
++++++.|+.+++||+....
T Consensus 232 ~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEEETTSEEEEEETTTCC
T ss_pred EEEEecCCceEEEEECCCCc
Confidence 99999999999999987653
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=6.4e-29 Score=214.35 Aligned_cols=212 Identities=14% Similarity=0.227 Sum_probs=167.3
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~ 106 (312)
+|...|++++|+|++..+|++|+.||.|++|++.++... .........+..|...|.+++|+| ++.+|+++
T Consensus 179 ~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 179 GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE--------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG--------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC--------CceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 588899999999998459999999999999999874310 000111223368899999999999 55688776
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCC-EEEEeccCceEEEEeccC-CeeE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKG-GKLV 183 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~-~l~~~~~dg~v~iwd~~~-~~~~ 183 (312)
.|+.|++||+++.. ..+....+..|... |++++| +|+++ +|++|+.||.|++||+++ ++++
T Consensus 251 ~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~~~--v~~i~~-~p~~~~~l~tg~~dg~v~vwd~~~~~~~~ 314 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNN-------------TSKPSHTVDAHTAE--VNCLSF-NPYSEFILATGSADKTVALWDLRNLKLKL 314 (430)
T ss_dssp ETTSEEEEEETTCSC-------------SSSCSEEEECCSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred eCCCeEEEEECCCCC-------------CCcceeEeecCCCC--eEEEEe-CCCCCCEEEEEeCCCeEEEEeCCCCCCCe
Confidence 59999999998751 01355667778766 999999 88887 688999999999999997 5678
Q ss_pred EEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCC---------------CCCCCCCChhhhhhhhccCCCCc-e
Q 021484 184 RLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPT---------------DFPPLPDNAEKIMKANKQGREDH-S 246 (312)
Q Consensus 184 ~~~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (312)
..+..|...|.+++|+|+++ +|++++.|+.|++||+... .+..+.+|...+.. ..+++++. +
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~~ 393 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD-FSWNPNEPWI 393 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE-EEECSSSTTE
T ss_pred EEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE-EEECCCCCCE
Confidence 88999999999999999996 5999999999999999862 12334455555544 44677666 8
Q ss_pred eEEecCCceEEEEEeccc
Q 021484 247 RITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 247 l~s~~~d~~i~i~~~~~~ 264 (312)
+++++.|+.|++|++...
T Consensus 394 l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEETTSEEEEEEECHH
T ss_pred EEEEECCCCEEEeEcccc
Confidence 999999999999998754
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.2e-28 Score=212.89 Aligned_cols=243 Identities=16% Similarity=0.257 Sum_probs=185.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|..+|.+++| ++ ++|++|+.||.|++||+.++++ .
T Consensus 155 i~iwd~~~~~~~~~~~-----------~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~~--------------~ 206 (435)
T 1p22_A 155 IKIWDKNTLECKRILT-----------GHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGEM--------------L 206 (435)
T ss_dssp EEEEESSSCCEEEEEC-----------CCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCCE--------------E
T ss_pred EEEEeCCCCeEEEEEc-----------CCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCcE--------------E
Confidence 5788887765443332 48889999999 45 7999999999999999998862 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCC---ceEecccCCceeeEEEEe
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~v~~~ 156 (312)
..+ ..|...|.+++|++ .+++++ .|+.|++||+.++ ... ..+.+|... |.+++|
T Consensus 207 ~~~-~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~----------------~~~~~~~~~~~~~~~--v~~~~~- 264 (435)
T 1p22_A 207 NTL-IHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASP----------------TDITLRRVLVGHRAA--VNVVDF- 264 (435)
T ss_dssp EEE-CCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSS----------------SCCEEEEEECCCSSC--EEEEEE-
T ss_pred EEE-cCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCC----------------CCceeeeEecCCCCc--EEEEEe-
Confidence 222 67899999999974 477775 6999999999876 333 566677765 999987
Q ss_pred cCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhh
Q 021484 157 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIM 235 (312)
Q Consensus 157 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~ 235 (312)
++++|++|+.||.|++||+++++.+..+.+|...|.++.| ++.++++++.||+|++||++++.. ..+.+|...+.
T Consensus 265 --~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 340 (435)
T 1p22_A 265 --DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 340 (435)
T ss_dssp --ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred --CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEE
Confidence 6889999999999999999999999999999999999999 568999999999999999998763 55666666664
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCc--------cce---------eEeecCCCccCCCCCCCeEEEeecCCCCC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQT--------LAY---------RERRYNAADFESDEEEGETYLLGFSDSDA 298 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~--------~~~---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 298 (312)
... + ++.++++++.|+.+++||+..... ... .....++..+.+...++.|.++++.++..
T Consensus 341 ~~~-~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 341 CIR-F--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp EEE-C--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC------
T ss_pred EEE-e--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCC
Confidence 433 2 678999999999999999865431 000 01122556677788899999999977654
Q ss_pred CC
Q 021484 299 SS 300 (312)
Q Consensus 299 ~~ 300 (312)
..
T Consensus 418 ~~ 419 (435)
T 1p22_A 418 AQ 419 (435)
T ss_dssp --
T ss_pred cc
Confidence 33
No 85
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.6e-28 Score=201.70 Aligned_cols=237 Identities=16% Similarity=0.268 Sum_probs=179.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCC-cccc-
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP-VDTF- 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~- 78 (312)
|+|||+.+.+..+++... +|...|++++|+|++ ++|++|+.||+|++|++.++++......... +..+
T Consensus 47 V~iWd~~tg~~~~~~~~~---------~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQME---------QPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEEETTTCCEEEEEECC---------STTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCEEEEEEec---------CCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 689999988766666542 378889999999999 8999999999999999998886543321110 0000
Q ss_pred ------------------------cccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCccccc
Q 021484 79 ------------------------CPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQ 133 (312)
Q Consensus 79 ------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~ 133 (312)
.....+.+|...+..+++++++++|+++ .|+.|++||+.++...
T Consensus 117 ~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----------- 185 (318)
T 4ggc_A 117 WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG----------- 185 (318)
T ss_dssp EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB-----------
T ss_pred cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc-----------
Confidence 0112235788899999999999999886 5999999999875200
Q ss_pred CCCCCceEecccCCceeeEEEEecCCCCE---EEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-
Q 021484 134 KREEPQVYSGHRNSQTVKGVNFFGPNDEY---VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG- 209 (312)
Q Consensus 134 ~~~~~~~~~~~~~~~~v~~v~~~s~~~~~---l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~- 209 (312)
.........+... |..+++ .+.+.. +++++.++.|++||........... +...+..+.|+|.+..+++++
T Consensus 186 -~~~~~~~~~~~~~--v~~~~~-~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 186 -WVPLQTFTQHQGA--VKAVAW-CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp -SCCSEEECCCCSC--EEEEEE-CTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEEC
T ss_pred -ccceeeecccCCc--eEEEEe-cCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEE
Confidence 0123334445544 899998 666543 3467889999999999887766554 667899999999999877665
Q ss_pred -CCCcEEEccCCCCC-CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 210 -IEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 210 -~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.|+.|++||+++++ +..+.+|...+.. ..+++++.+|++++.|+.|++||+...
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~-l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLS-LTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEE-EEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEE-EEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 79999999999877 4667788877754 457889999999999999999998643
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=231.19 Aligned_cols=236 Identities=14% Similarity=0.153 Sum_probs=190.8
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC--CCeEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLI 104 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 104 (312)
.+|.++|++++|+|++ .+|++|+.||.|++||+.++.. .....+.+|...|++++|+|+ +.+|+
T Consensus 6 ~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~-------------~~~~~l~~h~~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 6 NAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-------------KLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp --CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCTTSCSEEE
T ss_pred ccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-------------ccceeccCCcCceEEEEecCCCCCCEEE
Confidence 4699999999999998 7999999999999999984431 122223789999999999988 88888
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCC--CCceEecccCCceeeEEEEecCC--CCEEEEeccCceEEEEeccC
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKG 179 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~~~s~~--~~~l~~~~~dg~v~iwd~~~ 179 (312)
++ .||.|++||+.++ + ....+.+|... |.+++| +|+ ++++++|+.||.|++||+++
T Consensus 72 s~s~Dg~I~vwd~~~~----------------~~~~~~~~~~h~~~--V~~v~~-sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 72 SCSYDGKVLIWKEENG----------------RWSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp EEETTSCEEEEEEETT----------------EEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCS
T ss_pred EEeCCCeEEEEECCCC----------------cccccccccCCCCC--eEEEEE-CCCCCCCEEEEEeCCCcEEEEEeec
Confidence 86 5999999999876 3 55666777766 999999 898 99999999999999999987
Q ss_pred C--eeEEEeecCccceEEEEEcC-------------CCCeEEEEeCCCcEEEccCCCCC-----CCCCCCChhhhhhhhc
Q 021484 180 G--KLVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANK 239 (312)
Q Consensus 180 ~--~~~~~~~~~~~~v~~~~~~p-------------~~~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~ 239 (312)
+ .....+.+|...|.+++|+| ++.++++++.||+|++||+++.. ...+.+|...+.. ..
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~-l~ 211 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD-VA 211 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE-EE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE-EE
Confidence 6 34456678999999999999 58899999999999999998763 1344556666644 44
Q ss_pred cCCC---CceeEEecCCceEEEEEecccC-----c---------cc-eeEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 240 QGRE---DHSRITLTPDVIMHVLRLQRRQ-----T---------LA-YRERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 240 ~~~~---~~~l~s~~~d~~i~i~~~~~~~-----~---------~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
++++ +.++++++.|+.+++|++.... . .+ ...+.|++..+.+...++.|+++++..+
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred eccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 6777 8999999999999999987642 0 11 1266778888888888899999998743
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=226.16 Aligned_cols=223 Identities=11% Similarity=0.144 Sum_probs=177.4
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.......+... .+|..+|++++|+|+ + ++|++|+.||.|++||+.+++.
T Consensus 33 I~vwd~~~~~~~~~~~l---------~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~------------- 89 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTL---------TGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRW------------- 89 (753)
T ss_dssp EEEEEEETTEEEEEEEE---------CCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEE-------------
T ss_pred EEEEecCCCCCccceec---------cCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcc-------------
Confidence 57888875433222222 248899999999987 6 8999999999999999998752
Q ss_pred cccccccCCCccEEEEEEccC--CCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNT--SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
........|...|.+++|+|+ +.+++++ .||.|++||+.++. ......+.+|... |.+++|
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~--------------~~~~~~~~~~~~~--v~~l~~ 153 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW 153 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS--------------CCCCEEEECCSSC--EEEEEE
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC--------------CcceeEeecCCCc--eEEEEe
Confidence 122223678999999999999 8888886 59999999998751 0234456677755 999999
Q ss_pred ecC-------------CCCEEEEeccCceEEEEeccCC----eeEEEeecCccceEEEEEcCC---CCeEEEEeCCCcEE
Q 021484 156 FGP-------------NDEYVMSGSDCGHLFIWKKKGG----KLVRLMVGDRHVVNQLEPHPH---IPMFATCGIEKTVK 215 (312)
Q Consensus 156 ~s~-------------~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~p~---~~~l~t~~~d~~i~ 215 (312)
+| ++.+|++|+.||.|++||++++ .+...+.+|...|++++|+|+ ++++++++.||.|+
T Consensus 154 -~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 154 -APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp -CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred -cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence 78 5899999999999999999877 566778899999999999999 89999999999999
Q ss_pred EccCCCCC------CCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 216 LWAPMPTD------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 216 iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+||+.++. ......+...+ ....+++++.++++++.|+.+++|++...
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v-~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCC-CCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EecCCCCCCcceeEEeccCCCCCce-EEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99998763 22233344444 44557889999999999999999998754
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=5.7e-29 Score=223.66 Aligned_cols=253 Identities=11% Similarity=0.124 Sum_probs=192.5
Q ss_pred CeeecccCc----cceeeEEecccccCCcCCCCccc-eEEEEEcC--CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCC
Q 021484 1 MWQFDLRSD----SATRLFYCSSFSENSKQPMNSIR-LNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDT 73 (312)
Q Consensus 1 v~~wd~~~~----~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~p--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 73 (312)
|++||+.+. +....+ .+|... |++++|+| ++ ++|++++.||.|++||+.+++...
T Consensus 41 v~v~~~~~~~~~~~~~~~~-----------~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~------ 102 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQF-----------TGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESN------ 102 (615)
T ss_dssp EEEEECCSSCCSSCSEEEE-----------CTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGT------
T ss_pred EEEEECCCCCCccccceEE-----------ecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccc------
Confidence 468888765 322222 248889 99999999 98 899999999999999997551000
Q ss_pred CcccccccccccCCCccEEEEEEccCCCeEEEec-C----CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCc
Q 021484 74 PVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 148 (312)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (312)
.... .....+..|...|.+++|+|++++|+++. + +.|++|| .+ +....+.+|...
T Consensus 103 ~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~----------------~~~~~~~~~~~~- 162 (615)
T 1pgu_A 103 SVEV-NVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG----------------NSLGEVSGHSQR- 162 (615)
T ss_dssp EEEE-EEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC----------------CEEEECCSCSSC-
T ss_pred cccc-cccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CC----------------CcceeeecCCcc-
Confidence 0000 11222267889999999999999888864 4 5788888 33 466777788866
Q ss_pred eeeEEEEecCCCC-EEEEeccCceEEEEeccCCeeEEEeecCcc---ceEEEEEcCC-CCeEEEEeCCCcEEEccCCCCC
Q 021484 149 TVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVRLMVGDRH---VVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 149 ~v~~v~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
|.+++| +|+++ ++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.|+.|++||+.+++
T Consensus 163 -v~~~~~-~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 163 -INACHL-KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp -EEEEEE-CSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred -EEEEEE-CCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 999999 89987 799999999999999999999999999998 9999999999 9999999999999999998877
Q ss_pred C-CCC-C---CChhhhhhhhccCCCCceeEEecCCceEEEEEecccCccceeE-------------eecCCCccCCCCCC
Q 021484 224 F-PPL-P---DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE-------------RRYNAADFESDEEE 285 (312)
Q Consensus 224 ~-~~~-~---~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 285 (312)
. ..+ . .|...+.... +. ++.++++++.|+.+++|++.......... ..++...+.....+
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~-~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALS-WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEE-ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred EeEEecccccccCCceEEEE-Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC
Confidence 4 444 3 5666664444 55 88999999999999999987543221111 11145556666667
Q ss_pred CeEEEeecCC
Q 021484 286 GETYLLGFSD 295 (312)
Q Consensus 286 ~~v~~~~~~~ 295 (312)
+.+++++...
T Consensus 319 g~i~~~d~~~ 328 (615)
T 1pgu_A 319 GTLNFYELGH 328 (615)
T ss_dssp SCEEEEETTE
T ss_pred CCEEEEECCC
Confidence 7788887654
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.2e-28 Score=238.38 Aligned_cols=250 Identities=16% Similarity=0.195 Sum_probs=199.0
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|++++|+|++ .+|++++.|+.|++||+.++++ .
T Consensus 639 i~vw~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~~--------------~ 692 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIK-----------AHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGKL--------------V 692 (1249)
T ss_dssp EEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE--------------E
T ss_pred EEEEECCCCCEEEEec-----------cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCce--------------E
Confidence 5789988765433332 388999999999998 8999999999999999998862 2
Q ss_pred cccccCCCccEEEEEEccCC--CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec
Q 021484 81 RHLIGKNNIHITGLAYSNTS--ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~--~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s 157 (312)
..+ .+|...|.+++|+|++ .+++++ .|+.|++||+.++ +....+.+|... |.+++| +
T Consensus 693 ~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-s 752 (1249)
T 3sfz_A 693 HTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK----------------ECRNTMFGHTNS--VNHCRF-S 752 (1249)
T ss_dssp EEE-ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS----------------SEEEEECCCSSC--EEEEEE-C
T ss_pred EEE-cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc----------------chhheecCCCCC--EEEEEE-e
Confidence 222 6789999999999954 477776 5999999999987 677888889876 999999 9
Q ss_pred CCCCEEEEeccCceEEEEeccCCeeEEEee--------------------------------------------------
Q 021484 158 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMV-------------------------------------------------- 187 (312)
Q Consensus 158 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------------------------------------------------- 187 (312)
|++++|++++.||.|++||+.+++....+.
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 999999999999999999988765443321
Q ss_pred -----cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 188 -----GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 188 -----~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
+|...|.+++|+|+++++++++.|+.|++|++.++.. ..+.+|...+. ...+++++..+++++.|+.+++|++
T Consensus 833 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~-~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH-GVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEH
T ss_pred eEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE-EEEECCCCCEEEEEeCCCeEEEEEc
Confidence 5677899999999999999999999999999988763 45556666664 4457889999999999999999996
Q ss_pred cccC-----------------------------------------------ccceeEeecCCCccCCCCCCCeEEEeecC
Q 021484 262 QRRQ-----------------------------------------------TLAYRERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 262 ~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
.... ......+++++..+..+..++.+++++..
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 5310 11112456666777777777888888876
Q ss_pred CCC
Q 021484 295 DSD 297 (312)
Q Consensus 295 ~~~ 297 (312)
.+.
T Consensus 992 ~~~ 994 (1249)
T 3sfz_A 992 NNR 994 (1249)
T ss_dssp TTS
T ss_pred CCc
Confidence 553
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.3e-29 Score=215.17 Aligned_cols=214 Identities=14% Similarity=0.160 Sum_probs=161.5
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEcc---CCeecCCCCCCCCcccccccccccCCCccEEEEE--EccCCCeE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR---KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLA--YSNTSELL 103 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l 103 (312)
|..+|++++|+|++ .+|++|+.||.|++||+. +++........ .+..+... ..++...+.++. +++++.+|
T Consensus 110 h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 110 CSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-CIRKINLK--NFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-EEEEEEGG--GGSSCCCEEEEEEEECSSCEEE
T ss_pred CCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccccc-eeEEEEcc--CcccccCceEEEEEEcCCCCEE
Confidence 78899999999988 899999999999999995 44322110000 11111000 011566777877 56788888
Q ss_pred EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec--ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC
Q 021484 104 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 180 (312)
Q Consensus 104 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~ 180 (312)
+++ .|+.|++||++++ +.+..+.+ |... |.+++| +|++++|++|+.||.|++||++++
T Consensus 186 ~~~~~d~~i~iwd~~~~----------------~~~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTL----------------ERLQIIENSPRHGA--VSSICI-DEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp EEEETTSEEEEEETTTC----------------CEEEEEECCGGGCC--EEEEEE-CTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEeCCCeEEEEeCCCC----------------eeeEEEccCCCCCc--eEEEEE-CCCCCEEEEEcCCCeEEEEEcCCc
Confidence 886 5999999999887 77888887 6654 999999 999999999999999999999999
Q ss_pred eeEEEee-cCccceEEEEEc----CCCCeEEEEeCCCcEEEccCCCCCC-CCCC------------------------C-
Q 021484 181 KLVRLMV-GDRHVVNQLEPH----PHIPMFATCGIEKTVKLWAPMPTDF-PPLP------------------------D- 229 (312)
Q Consensus 181 ~~~~~~~-~~~~~v~~~~~~----p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~------------------------~- 229 (312)
+++..+. .|..+|.+++|+ |++.+|++++.|++|++||+++++. ..+. +
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 9998886 788899999665 4677999999999999999986541 1111 1
Q ss_pred -ChhhhhhhhccCCCCceeEEecCCceEEEEEecccCcc
Q 021484 230 -NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 267 (312)
Q Consensus 230 -~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~ 267 (312)
|...+. ...+. ++.++++++.|+.|++|++......
T Consensus 327 ~~~~~v~-~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 327 RSLNALS-TISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp CSGGGGC-CEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred ccCCceE-EEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 333332 23344 5689999999999999998776433
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.9e-28 Score=211.45 Aligned_cols=203 Identities=12% Similarity=0.102 Sum_probs=160.1
Q ss_pred CCCccceEEEEEcCCCCcE-EEEEeCCCeEEEEEcc--CCeecCCCCCCCCcccccccccc-cCCCccEEEEEEccCCCe
Q 021484 27 PMNSIRLNAIVIDPRNPNY-FAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNTSEL 102 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~-l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 102 (312)
++|...|++++|+|++ .+ +++++.||.|++||+. +++. ...+. ..|...|.+++|+|++++
T Consensus 99 ~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~--------------~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNV--------------LKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp -CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSC--------------EEEEEEEECSSCEEEEEECTTSSE
T ss_pred CccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCce--------------eeeeecccCCCCceEEEEcCCCCE
Confidence 3567789999999999 56 5999999999999998 6652 12111 256788999999999998
Q ss_pred EEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCC-CCceEecccCCceeeEEEEecCC---CCEEEEeccCceEEEEec
Q 021484 103 LISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFFGPN---DEYVMSGSDCGHLFIWKK 177 (312)
Q Consensus 103 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~s~~---~~~l~~~~~dg~v~iwd~ 177 (312)
|+++ .++.+++|++.++.. .. ....+.+|... |.+++| +|+ +++|++++.|+.|++||+
T Consensus 164 l~~~~~~g~v~~~~~~~~~~-------------~~~~~~~~~~h~~~--v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPE-------------EKFTQEPILGHVSM--LTDVHL-IKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp EEEEETTSEEEEEETTSCCC-------------SSCCCCCSEECSSC--EEEEEE-EECTTSCEEEEEEETTSCEEEEEE
T ss_pred EEEEeCCCcEEEEecCCccc-------------ccccceeeecccCc--eEEEEE-cCCCCCCcEEEEEcCCCcEEEEEC
Confidence 8887 599999999987610 01 22367788866 999999 899 999999999999999999
Q ss_pred cCCeeEEE-eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCCh------------------------
Q 021484 178 KGGKLVRL-MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA------------------------ 231 (312)
Q Consensus 178 ~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~------------------------ 231 (312)
++++.+.. +.+|...|.+++|+ ++++|++++.|++|++||+.+++. ..+..+.
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 99988877 56899999999999 999999999999999999998763 2222110
Q ss_pred hhhhhhhccCCCCceeEEec-CCceEEEEEe
Q 021484 232 EKIMKANKQGREDHSRITLT-PDVIMHVLRL 261 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~l~s~~-~d~~i~i~~~ 261 (312)
...+....+.+++.++++++ .++.+++|++
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 01122334566788888887 8999999999
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.8e-28 Score=208.45 Aligned_cols=243 Identities=12% Similarity=0.064 Sum_probs=186.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~-~d~ 109 (312)
....++++|+...++++++.||.|++|++...... . .....+.+|...|.+++|+| ++.+|+++ .|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-----~------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV-----D------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC-----C------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC-----C------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 34568899977445556889999999999654311 0 11222378999999999999 88899987 599
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC-CEEEEeccCceEEEEeccCCeeEEEe--
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLM-- 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~-- 186 (312)
.|++||+.++.... ........+.+|... |.+++| +|++ ++|++++.||.|++||+.+++.+..+
T Consensus 105 ~v~vw~~~~~~~~~---------~~~~~~~~~~~h~~~--v~~~~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 105 TVMVWEIPDGGLVL---------PLREPVITLEGHTKR--VGIVAW-HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp EEEEEECCTTCCSS---------CBCSCSEEEECCSSC--EEEEEE-CSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred eEEEEEccCCCCcc---------ccCCceEEecCCCCe--EEEEEE-CcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 99999998752100 000356778888866 999999 8997 69999999999999999999999999
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCC-CCChhhhhhhhccCCCCceeEEe---cCCceEEEEEe
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL-PDNAEKIMKANKQGREDHSRITL---TPDVIMHVLRL 261 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~i~~~ 261 (312)
..|...|.+++|+|++++|++++.|+.|++||+++++. ..+ ..|....+....+.+++.+++++ +.|+.+++||+
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 78999999999999999999999999999999998764 334 44555434455577888899998 89999999998
Q ss_pred cccCccc------------eeEeecCCCccC-CCCCCCeEEEeecCCCC
Q 021484 262 QRRQTLA------------YRERRYNAADFE-SDEEEGETYLLGFSDSD 297 (312)
Q Consensus 262 ~~~~~~~------------~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 297 (312)
+...... ...+.+++..+. ++..++.|.++++..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 7643311 114566666664 44567789999887654
No 93
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-28 Score=208.24 Aligned_cols=180 Identities=9% Similarity=0.064 Sum_probs=141.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+|||+++.+.... .. |...|++++|+|++ +++++++.+ .+++|+..+++. ..
T Consensus 159 i~iwd~~~~~~~~~--~~----------~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~-------------~~ 211 (365)
T 4h5i_A 159 MRIIDPSDLTEKFE--IE----------TRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSC-------------IA 211 (365)
T ss_dssp EEEEETTTTEEEEE--EE----------CSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCE-------------EE
T ss_pred EEEeECCCCcEEEE--eC----------CCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcc-------------ee
Confidence 58999987654332 22 56789999999999 799988755 566677666552 12
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCC----cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDE----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
......|...|.+++|+|++++++++ .|+ .+++|++.... ........+.+|... |++++|
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~------------~~~~~~~~~~~~~~~--V~~~~~ 277 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN------------TSVLRSKQVTNRFKG--ITSMDV 277 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE------------EEEEEEEEEESSCSC--EEEEEE
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce------------ecceeeeeecCCCCC--eEeEEE
Confidence 22336788899999999999988886 455 58888886541 000123455677755 999999
Q ss_pred ecCCCCEEEEeccCceEEEEeccCCeeEEEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCC
Q 021484 156 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 156 ~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
+|++++|++|+.|+.|+|||+++++++..+ .+|...|++++|+|++++||++|.|++||||++...
T Consensus 278 -Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 278 -DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999999999999875 789999999999999999999999999999998643
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=6e-28 Score=206.18 Aligned_cols=262 Identities=13% Similarity=0.153 Sum_probs=187.9
Q ss_pred CeeecccCccceeeEEeccccc--CCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSE--NSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.+......+....... .....+|...|.+++|+|+++.+|++++.||.|++||+.+++..
T Consensus 68 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------ 135 (408)
T 4a11_B 68 IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA------------ 135 (408)
T ss_dssp EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE------------
T ss_pred EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc------------
Confidence 5789998776555544322110 01113589999999999955589999999999999999988632
Q ss_pred cccccccCCCccEEEEEEccCC---CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNTS---ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 154 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~---~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 154 (312)
.. ..+...+.+++|+|.+ .+++++ .++.|++||+.++ +....+.+|... |.+++
T Consensus 136 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~--v~~~~ 193 (408)
T 4a11_B 136 --DV--FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG----------------SCSHILQGHRQE--ILAVS 193 (408)
T ss_dssp --EE--EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS----------------CCCEEECCCCSC--EEEEE
T ss_pred --ee--ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc----------------ceeeeecCCCCc--EEEEE
Confidence 11 2356788999999855 477776 6999999999887 677888888866 99999
Q ss_pred EecCCCC-EEEEeccCceEEEEeccCCe-eEEEe---------------ecCccceEEEEEcCCCCeEEEEeCCCcEEEc
Q 021484 155 FFGPNDE-YVMSGSDCGHLFIWKKKGGK-LVRLM---------------VGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 217 (312)
Q Consensus 155 ~~s~~~~-~l~~~~~dg~v~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iw 217 (312)
| +|+++ +|++++.||.|++||+++++ ++..+ ..|...|.+++|+|++++|++++.|+.|++|
T Consensus 194 ~-~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 194 W-SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp E-CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred E-CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9 89988 58899999999999998765 44444 5688899999999999999999999999999
Q ss_pred cCCCCCCC-CCCCC----hhhhhhhhccCCCCceeEEecCCceEEEEEecccC---------ccc-eeEeecCCCccCCC
Q 021484 218 APMPTDFP-PLPDN----AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ---------TLA-YRERRYNAADFESD 282 (312)
Q Consensus 218 d~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~---------~~~-~~~~~~~~~~~~~~ 282 (312)
|+.+++.. ....+ ................++.++.++.+++|++.... ..+ ...+.+++..+.+.
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 99876532 11111 11111111122234566666777888888764321 112 23677777777777
Q ss_pred CCCCeEEEeecCCCC
Q 021484 283 EEEGETYLLGFSDSD 297 (312)
Q Consensus 283 ~~~~~v~~~~~~~~~ 297 (312)
..++.+.+|++..+.
T Consensus 353 ~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 353 SRDCNILAWVPSLYE 367 (408)
T ss_dssp ETTSCEEEEEECC--
T ss_pred CCCCeEEEEeCCCCC
Confidence 777778888876654
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=4.1e-29 Score=241.55 Aligned_cols=244 Identities=10% Similarity=0.077 Sum_probs=198.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+ .+|...|++++|+|++ +++++++.||.|++||+.+++..
T Consensus 985 i~i~d~~~~~~~~~~-----------~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~-------------- 1038 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSG-----------VGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYV-------------- 1038 (1249)
T ss_dssp CEEEETTTTSCEEEC-----------CCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEE--------------
T ss_pred EEEEEcCCCceeeec-----------ccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceE--------------
Confidence 467777665432221 2488999999999999 89999999999999999988732
Q ss_pred cccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND 160 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~ 160 (312)
....|...|.+++|+|++.+++.+.|+.|++||+.++ +....+.+|... |.+++| +|++
T Consensus 1039 --~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-s~d~ 1097 (1249)
T 3sfz_A 1039 --FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITG----------------RIERDFTCHQGT--VLSCAI-SSDA 1097 (1249)
T ss_dssp --CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTT----------------CCCEEEECCSSC--CCCEEE-CSSS
T ss_pred --EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCC----------------ceeEEEcccCCc--EEEEEE-CCCC
Confidence 1257889999999999887766678999999999988 788889999866 999999 9999
Q ss_pred CEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCC---------CCC
Q 021484 161 EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL---------PDN 230 (312)
Q Consensus 161 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~---------~~~ 230 (312)
++|++++.||.|++||+.+++++..+.+|...|++++|+|++++|++++.||+|++||+.+++. ..+ ..|
T Consensus 1098 ~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 1177 (1249)
T 3sfz_A 1098 TKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATH 1177 (1249)
T ss_dssp SSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------C
T ss_pred CEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEecccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988764 322 234
Q ss_pred hhhhhhhhccCCCCceeEEecCCceEEEEEecccCcc----------ceeEeecCCCccCCCCCCCeEEEeecC
Q 021484 231 AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL----------AYRERRYNAADFESDEEEGETYLLGFS 294 (312)
Q Consensus 231 ~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~ 294 (312)
...+ ....+++++.++++++ +.+++|++...... ....+++++..+.+...+|.++++++.
T Consensus 1178 ~~~v-~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1178 GGWV-TDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp CSCC-CEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred CceE-EEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 4444 4455788999998886 89999998664322 112667777777777778888888763
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.8e-28 Score=209.68 Aligned_cols=217 Identities=15% Similarity=0.242 Sum_probs=172.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|.+++|++ ++|++|+.||.|++||++... ..
T Consensus 158 i~iwd~~~~~~~~~~~-----------~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~--------------~~ 209 (401)
T 4aez_A 158 VDIYDVESQTKLRTMA-----------GHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIAN--------------HQ 209 (401)
T ss_dssp EEEEETTTCCEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS--------------CE
T ss_pred EEEEECcCCeEEEEec-----------CCCCceEEEEECC---CEEEEEcCCCCEEEEecccCc--------------ce
Confidence 5788887765433332 3788999999954 699999999999999998543 22
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+..|...|.+++|+|++.+|+++ .|+.|++||+.++ +....+..|... |.+++| +|+
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~p~ 270 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS----------------IPKFTKTNHNAA--VKAVAW-CPW 270 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS----------------SEEEEECCCSSC--CCEEEE-CTT
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC----------------CccEEecCCcce--EEEEEE-CCC
Confidence 22337789999999999999999887 5999999999887 677777788766 999999 886
Q ss_pred C-CEEEEec--cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe--CCCcEEEccCCCCCC---CCCCCCh
Q 021484 160 D-EYVMSGS--DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTDF---PPLPDNA 231 (312)
Q Consensus 160 ~-~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~--~d~~i~iwd~~~~~~---~~~~~~~ 231 (312)
+ .++++++ .|+.|++||+.+++++..+. +...|.+++|+|+++++++++ .||.|++|++.++.. ..+.+|.
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~ 349 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD 349 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC
Confidence 6 4556654 79999999999999988886 567899999999999998854 899999999987642 2344566
Q ss_pred hhhhhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 232 EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
..+. ...+++++.++++++.|+.+++|++.....
T Consensus 350 ~~v~-~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 350 TRVL-YSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SCCC-EEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred CCEE-EEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 5554 345788999999999999999999887643
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.4e-28 Score=199.76 Aligned_cols=248 Identities=13% Similarity=0.152 Sum_probs=190.4
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+.. |...|.+++|+|++ .+|++++.||.|++|++..... . ..
T Consensus 41 v~vw~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~------~------~~ 96 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYT-----------GQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSG------E------DP 96 (313)
T ss_dssp EEEEEESSSEEEEEEEE-----------CSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTT------S------CC
T ss_pred EEEEECCCCEEEEEeec-----------CCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCC------C------Cc
Confidence 57899977654444433 67889999999998 8999999999999999976531 0 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+..|...|.+++| ++.+++++ .|+.|++|| .. +....+..|... +.+++|++++
T Consensus 97 ~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~----------------~~~~~~~~~~~~--v~~~~~~~~~ 154 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG----------------SLVYNLQAHNAS--VWDAKVVSFS 154 (313)
T ss_dssp -CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT----------------EEEEEEECCSSC--EEEEEEEETT
T ss_pred ccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC----------------cEEEecccCCCc--eeEEEEccCC
Confidence 1222678999999999 46677776 699999999 33 566778888866 9999995559
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKA 237 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~ 237 (312)
++++++++.||.|++|| ..+....+.. |...|.+++|+|++. +++++.|+.|++||+++++. ..+..|...+. .
T Consensus 155 ~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-~ 230 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY-C 230 (313)
T ss_dssp TTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE-E
T ss_pred CCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEE-E
Confidence 99999999999999999 4567777776 889999999999998 99999999999999998764 44555666554 3
Q ss_pred hccCCCCceeEEecCCceEEEEEecccCccce----------eEeecCCCccCCCCCCCeEEEeecCCCCCCC
Q 021484 238 NKQGREDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFESDEEEGETYLLGFSDSDASS 300 (312)
Q Consensus 238 ~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 300 (312)
..+++++ .+++++.|+.+++|++........ ..+.+++. +.....++.+.++++..+....
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred EEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 4466766 689999999999999866532211 24555555 4456677889999987765443
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=4e-28 Score=211.29 Aligned_cols=229 Identities=12% Similarity=0.174 Sum_probs=175.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcC--CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCC--cc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP--VD 76 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~ 76 (312)
|++||+++.+....+. +|..+|.+++|++ ++ .++++|+.|+.|++||+.+............ ..
T Consensus 185 i~vwd~~~~~~~~~~~-----------~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFE-----------GHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp EEEEETTTTEEEEEEC-----------CCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred EEEEECCCCcEEEEEC-----------CCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 5789998776433332 3788999999984 55 8999999999999999987764322111100 00
Q ss_pred ------cccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCce
Q 021484 77 ------TFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT 149 (312)
Q Consensus 77 ------~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (312)
.........+|...+.++ ++++.+++++ .|+.|++||+.++ +.+..+.+|...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~----------------~~~~~~~~~~~~-- 312 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM----------------KCLYILSGHTDR-- 312 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT----------------EEEEEECCCSSC--
T ss_pred eeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC----------------cEEEEecCCCCC--
Confidence 000122336788888877 5778888886 5999999999887 678888888866
Q ss_pred eeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCC
Q 021484 150 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD 229 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~ 229 (312)
|.+++| +|++++|++|+.||.|++||+++++++..+.+|...|.+++|+ +.++++++.||+|++||+.+...... .
T Consensus 313 v~~~~~-~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~-~ 388 (464)
T 3v7d_B 313 IYSTIY-DHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS-Y 388 (464)
T ss_dssp EEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE-E
T ss_pred EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee-e
Confidence 999999 8999999999999999999999999999999999999999997 57999999999999999987653211 1
Q ss_pred ChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 230 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
+.........+.+++.++++++ |+.+++|++.+...
T Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 389 HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL 424 (464)
T ss_dssp ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE
T ss_pred cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE
Confidence 2233334455677888888888 89999999887643
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1.4e-28 Score=228.33 Aligned_cols=218 Identities=17% Similarity=0.183 Sum_probs=181.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+. +|..+|++++|+|++ ++|++|+.||.|++||+.+++. .
T Consensus 37 v~iwd~~~~~~~~~~~-----------~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~--------------~ 90 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQ-----------VTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEK--------------V 90 (814)
T ss_dssp EEEEETTTTEEEEEEE-----------CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCE--------------E
T ss_pred EEEEECCCCceEEEEe-----------cCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE--------------E
Confidence 5789988765444433 278899999999998 8999999999999999998862 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP- 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~- 158 (312)
..+ .+|...|++++|+|++.+|+++ .|+.|++||+.++. .....+.+|... |.+++| +|
T Consensus 91 ~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---------------~~~~~~~~~~~~--v~~~~~-~p~ 151 (814)
T 3mkq_A 91 VDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF-NPK 151 (814)
T ss_dssp EEE-ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS---------------EEEEEEECCSSC--EEEEEE-ETT
T ss_pred EEE-ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc---------------eEEEEEcCCCCc--EEEEEE-EcC
Confidence 222 6789999999999999988886 59999999998651 455677788866 999999 88
Q ss_pred CCCEEEEeccCceEEEEeccCCeeEEEeecCc-cceEEEEEcC--CCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhh
Q 021484 159 NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKI 234 (312)
Q Consensus 159 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~ 234 (312)
+++.|++++.||.|++||+.+++....+..+. ..+..++|+| ++.++++++.||.|++||+.++.. ..+.+|...+
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v 231 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 88999999999999999999888877776555 8899999999 999999999999999999987763 4444555555
Q ss_pred hhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 235 MKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 235 ~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
....+++++.++++++.|+.+++|++...
T Consensus 232 -~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 232 -SFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp -EEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred -EEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 44557888999999999999999998764
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=9.6e-29 Score=206.45 Aligned_cols=232 Identities=8% Similarity=-0.050 Sum_probs=183.5
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~ 106 (312)
+|...|++++|+|++ .+|++++.|+.|++|++.+++.. ...... ..|...|.+++|+|+++ +|+++
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~-----------~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 9 APKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKN-----------VDLLQS-LRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTE-----------EEEEEE-EECSSCEEEEEEEESSSEEEEEE
T ss_pred CCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcc-----------ccceee-eecCCceEEEEECCCCCcEEEEE
Confidence 589999999999998 79999999999999999876400 011222 57889999999999999 88886
Q ss_pred -cCCcEEEEEc-CCCcCCCCCcCCcccccCCCCCceEec--ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccC---
Q 021484 107 -NDELVYLFEK-NMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG--- 179 (312)
Q Consensus 107 -~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~--- 179 (312)
.|+.|++||+ .++ ....+.+ |... |.+++| +| +++|++++.|+.|++||+++
T Consensus 76 ~~dg~i~~wd~~~~~-----------------~~~~~~~~~~~~~--v~~l~~-~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 76 TVQGEILKVDLIGSP-----------------SFQALTNNEANLG--ICRICK-YG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp ETTSCEEEECSSSSS-----------------SEEECBSCCCCSC--EEEEEE-ET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred cCCCeEEEEEeccCC-----------------ceEeccccCCCCc--eEEEEe-CC-CCEEEEEcCCCeEEEEccccccc
Confidence 5999999999 775 3466677 7765 999999 78 99999999999999999987
Q ss_pred ------CeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC-CCCC---CCCCChhhhhhhhccCC-CCceeE
Q 021484 180 ------GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDFP---PLPDNAEKIMKANKQGR-EDHSRI 248 (312)
Q Consensus 180 ------~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~~~---~~~~~~~~~~~~~~~~~-~~~~l~ 248 (312)
++++..+. |...|.+++|+|++ +++++.|+.|++||++. .... ....+...+ ....+.+ ++.+++
T Consensus 135 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i-~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI-RDVALLPKEQEGYA 210 (342)
T ss_dssp BCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCE-EEEEECSGGGCEEE
T ss_pred ccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCce-eEEEECCCCCCEEE
Confidence 66666666 88899999999987 99999999999999988 4421 112233333 4455777 889999
Q ss_pred EecCCceEEEEEeccc------Cc------------------cc-eeEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 249 TLTPDVIMHVLRLQRR------QT------------------LA-YRERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 249 s~~~d~~i~i~~~~~~------~~------------------~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
+++.|+.+++|++... .. .+ ...+.+++..+.+...++.|+++|...+.
T Consensus 211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 9999999999998654 11 11 12566677778888888889999987654
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=1.2e-27 Score=207.22 Aligned_cols=240 Identities=13% Similarity=0.190 Sum_probs=190.2
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+ .+|..+|.+++|++ .++++|+.||+|++||+.+++. .
T Consensus 141 i~vwd~~~~~~~~~~-----------~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~--------------~ 192 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTL-----------VGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGEC--------------I 192 (445)
T ss_dssp EEEEETTTCCEEEEC-----------CCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEE--------------E
T ss_pred EEEEECCCCcEEEEE-----------cCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcE--------------E
Confidence 578888876533322 24889999999983 6999999999999999998872 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ .+|...|.+++|+ +..++++ .|+.|++||+.++ +....+.+|... +.+++| +
T Consensus 193 ~~~-~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~----------------~~~~~~~~~~~~--v~~~~~---~ 248 (445)
T 2ovr_B 193 HTL-YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG----------------QCLHVLMGHVAA--VRCVQY---D 248 (445)
T ss_dssp EEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC----------------CEEEEEECCSSC--EEEEEE---C
T ss_pred EEE-CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC----------------cEEEEEcCCccc--EEEEEE---C
Confidence 222 6789999999996 4567775 6999999999987 677888888866 999987 6
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKAN 238 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~ 238 (312)
++++++|+.||.|++||+++++++..+.+|...|.+++| ++.++++++.|+.|++||+++++. ..+.+|...+..
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-- 324 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-- 324 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE--
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE--
Confidence 889999999999999999999999999999999999999 888999999999999999988763 445555544432
Q ss_pred ccCCCCceeEEecCCceEEEEEecccCcccee-----------EeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 239 KQGREDHSRITLTPDVIMHVLRLQRRQTLAYR-----------ERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 239 ~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
...++.++++++.|+.+++||++........ .....+..+.+...++.|.++++.++.
T Consensus 325 -~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 325 -MELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp -EEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred -EEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc
Confidence 2335679999999999999998654322111 122245567777788899999987765
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.5e-28 Score=209.53 Aligned_cols=237 Identities=11% Similarity=0.032 Sum_probs=150.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcC--------CCCcEEEEEeCCCeEEEEEccCCeecCCCCCC
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--------RNPNYFAVGGSDEYARVYDIRKCHWYSPISSD 72 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p--------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 72 (312)
|+|||++............ ..||...|++++|+| ++ ++||+|+.|++|++||+.++.
T Consensus 113 v~lw~~~~~~~~~~~~~~~------~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~-------- 177 (393)
T 4gq1_A 113 VRLIITKNETIITQHVLGG------KSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEG-------- 177 (393)
T ss_dssp EEEEEEETTEEEEEEEECT------TTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTE--------
T ss_pred EEEEECCCCccceeeeecc------cCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCc--------
Confidence 5889988765433333322 246999999999998 56 899999999999999998775
Q ss_pred CCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcC-----Ccc----cccCCCCCceE
Q 021484 73 TPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSL-----SPE----DLQKREEPQVY 141 (312)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~-----~~~----~~~~~~~~~~~ 141 (312)
+.... ..|...+.+++|+|++. +|+++ .|+.|++||+.++........ ..+ ...........
T Consensus 178 ------~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 178 ------PILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp ------EEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred ------eeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 22222 56788999999999885 77776 599999999987632111000 000 00000111223
Q ss_pred ecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEc------------------C--C
Q 021484 142 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH------------------P--H 201 (312)
Q Consensus 142 ~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~------------------p--~ 201 (312)
.+|... +.++.|++++++.|++++.|+.+++||+.+++....+..|...+..+.+. | +
T Consensus 251 ~~~~~~--v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 4gq1_A 251 SGIASS--LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYM 328 (393)
T ss_dssp -CCSSS--CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCT
T ss_pred cccccc--ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCC
Confidence 455544 89999977999999999999999999998887766666555444443333 3 2
Q ss_pred CCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 202 IPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 202 ~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
+.++++++.||+|++||+.++.. ..+..+...+ ....|++++++|++++.++ +.+|++..
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V-~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPI-VDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTTCCEEEEECSSCE-EEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEecCCCCcE-EEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 23567788999999999988764 3334455555 4556899999999988766 56666543
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=1.5e-27 Score=206.65 Aligned_cols=238 Identities=16% Similarity=0.241 Sum_probs=185.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+. +|...|.+++|++ ..+++|+.||.|++||+.+++. .
T Consensus 181 i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~--------------~ 232 (445)
T 2ovr_B 181 LKVWNAETGECIHTLY-----------GHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQC--------------L 232 (445)
T ss_dssp EEEEETTTTEEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCE--------------E
T ss_pred EEEEECCcCcEEEEEC-----------CCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcE--------------E
Confidence 5789988765433332 3788999999964 5799999999999999998762 2
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
..+ .+|...|.+++| ++.+++++ .|+.|++||+.++ +....+.+|... +.+++| +
T Consensus 233 ~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~---~ 288 (445)
T 2ovr_B 233 HVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE----------------TCLHTLQGHTNR--VYSLQF---D 288 (445)
T ss_dssp EEE-ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT----------------EEEEEECCCSSC--EEEEEE---C
T ss_pred EEE-cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC----------------cEeEEecCCCCc--eEEEEE---C
Confidence 222 678999999999 67777776 6999999999887 677888888866 999987 6
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCC---Chhhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD---NAEKIM 235 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~---~~~~~~ 235 (312)
++++++++.||.|++||+++++++..+.+|...+.++.+ +++++++++.||.|++||+++++. ..+.. |...+.
T Consensus 289 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 289 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEE
Confidence 899999999999999999999999999999999988877 567999999999999999987763 33332 444443
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCccce---------------eEeecCCCccCCCCCCCe----EEEeecCC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY---------------RERRYNAADFESDEEEGE----TYLLGFSD 295 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~----v~~~~~~~ 295 (312)
... + ++.++++++.|+.+++|++........ ..+.+++..++....+|. ++++||+.
T Consensus 367 ~~~-~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 367 CLQ-F--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEE-E--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEE-E--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 332 2 467999999999999999876532211 145566666666655554 78888754
No 104
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.4e-28 Score=196.48 Aligned_cols=210 Identities=14% Similarity=0.071 Sum_probs=146.7
Q ss_pred ccceEEEEEcCC----CCcEEEEEeCCCeEEEEEccCCeecCCCC--CCCCcccccc------cccccCCCccEEEEEEc
Q 021484 30 SIRLNAIVIDPR----NPNYFAVGGSDEYARVYDIRKCHWYSPIS--SDTPVDTFCP------RHLIGKNNIHITGLAYS 97 (312)
Q Consensus 30 ~~~v~~~~~~p~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~i~~~~~~ 97 (312)
...|.+++|+|+ + +.+++++. .+++|++.+++++.... .+..++.+.. ...+..|...+..++|+
T Consensus 111 ~~~v~sla~spd~~~~~-~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 111 IREIRALFCSSDDESEK-QVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp EEEEEEECC------CC-EEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred ccceEEEEECCCccccc-cEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 457889999998 7 67777664 25555555555433211 1222211111 11114677778888888
Q ss_pred c---CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC-CceeeEEEEecCCCCEE---------
Q 021484 98 N---TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-SQTVKGVNFFGPNDEYV--------- 163 (312)
Q Consensus 98 ~---~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~s~~~~~l--------- 163 (312)
+ ++.+|+++ .|++|+|||+.++ ++++++.+|.. ...+.+++| +|+++++
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TG----------------k~l~tL~g~~~~v~~v~~vaf-SpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTG----------------QLLKKMHIDDSYQASVCHKAY-SEMGLLFIVLSHPCAK 250 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTC----------------CEEEEEECCC---CCCEEEEE-EETTEEEEEEC-----
T ss_pred ccCCCCceEEEecCCCcEEEEECCCC----------------cEEEEEcCCCcceeeeEEEEE-CCCCCEEEEeccCCCc
Confidence 8 56789986 5999999999998 78888886542 123778889 8999886
Q ss_pred ---EEeccCceEEEEeccCCeeEEEe-----ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhh
Q 021484 164 ---MSGSDCGHLFIWKKKGGKLVRLM-----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKI 234 (312)
Q Consensus 164 ---~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~ 234 (312)
++|+.|++|++||..+++.+..+ .+|...+.+..+ ++..+++++.|++|+|||+.+++. .++.+|...+
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CC
T ss_pred ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCe
Confidence 56788999999999999987765 256555544444 478899999999999999999874 6677788777
Q ss_pred hhhhccCCCCceeEEecCCceEEEEEe
Q 021484 235 MKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 235 ~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
+....+++++.+|++++.|++|++|++
T Consensus 329 vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 329 WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 666679999999999999999999985
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=195.82 Aligned_cols=229 Identities=17% Similarity=0.203 Sum_probs=180.1
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
+|..+|++++| |++ .+|++++.||.|++||+.+++. .. .+..|...|.+++|+|++++|+++
T Consensus 16 ~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~~--------------~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 16 GHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQWL--------------GT-VVYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSEE--------------EE-EEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCEE--------------EE-EeecCCccEEEEEECCCCCEEEEec
Confidence 58999999999 887 7999999999999999987752 22 226788999999999999988886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.|+.|++|++.... ..+....+.+|... |.+++| ++++|++++.||.|++|| .++.+..+
T Consensus 79 ~dg~i~~~~~~~~~-------------~~~~~~~~~~~~~~--i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 79 KDTMINGVPLFATS-------------GEDPLYTLIGHQGN--VCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp TTSCEEEEETTCCT-------------TSCC-CEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred CCCeEEEEEeeecC-------------CCCcccchhhcccC--EEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 59999999997641 12456677788866 999998 477999999999999999 67888899
Q ss_pred ecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 187 VGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 187 ~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
..|...+.+++|+| ++..+++++.|+.|++||.... ...+.. +... +....+++++. +++++.|+.+++|+++..
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV-IKTFSGIHNDV-VRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE-EEEECSSCSSC-EEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce-EEEEeccCccc-EEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 99999999999988 8999999999999999994332 223333 3333 34455666666 999999999999998754
Q ss_pred Cccce----------eEeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 265 QTLAY----------RERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 265 ~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
..... ..+.+++ .+.+...++.|.++++..+.
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 216 DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 32211 2455555 57777788899999987664
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=9.3e-28 Score=200.46 Aligned_cols=217 Identities=11% Similarity=0.040 Sum_probs=167.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCc-EEEEEeCCCeEEEEEc-cCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPN-YFAVGGSDEYARVYDI-RKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~ 78 (312)
|++||+.+.......... .+|...|++++|+|++ + +|++|+.||.|++||+ .+++.
T Consensus 35 v~iw~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~------------- 92 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQS--------LRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPSF------------- 92 (342)
T ss_dssp EEEEEEETTTTEEEEEEE--------EECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSSE-------------
T ss_pred EEEEEeCCCCccccceee--------eecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCce-------------
Confidence 578998876522221111 0278899999999998 8 9999999999999999 77652
Q ss_pred cccccccC--CCccEEEEEEccCCCeEEEe-cCCcEEEEEcCC---------CcCCCCCcCCcccccCCCCCceEecccC
Q 021484 79 CPRHLIGK--NNIHITGLAYSNTSELLISY-NDELVYLFEKNM---------GLGPSPLSLSPEDLQKREEPQVYSGHRN 146 (312)
Q Consensus 79 ~~~~~~~~--~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (312)
..+.. |...|.+++|+| +.+|+++ .|+.|++||+.+ . +.+..+. +..
T Consensus 93 ---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~-~~~ 151 (342)
T 1yfq_A 93 ---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKN----------------LNSNNTK-VKN 151 (342)
T ss_dssp ---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEE----------------SCSSSSS-SCC
T ss_pred ---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccC----------------CeeeEEe-eCC
Confidence 12256 899999999999 8888886 699999999976 4 4445554 554
Q ss_pred CceeeEEEEecCCCCEEEEeccCceEEEEeccC-Ce--eEEEeecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCC
Q 021484 147 SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GK--LVRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 147 ~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~-~~--~~~~~~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
. +.+++| ++++ +++++.++.|++||+++ ++ .......|...|.+++|+| +++++++++.||.|++|++...
T Consensus 152 ~--v~~~~~-~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 152 K--IFTMDT-NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp C--EEEEEE-CSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred c--eEEEEe-cCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 4 999999 7776 99999999999999987 44 3334456788999999999 9999999999999999998765
Q ss_pred ------C-CCCCCCChh--------hhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 223 ------D-FPPLPDNAE--------KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 223 ------~-~~~~~~~~~--------~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
. ...+..|.. ..+....+++++.++++++.|+.+++||+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 2 223333322 123445578889999999999999999987654
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=212.07 Aligned_cols=189 Identities=11% Similarity=0.081 Sum_probs=150.7
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCc-----cEEEEEEccCCCeE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-----HITGLAYSNTSELL 103 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l 103 (312)
|...|.+++|+|+| .+||+++.||.|++||... . ...+ . |.. .+.+++|||+|++|
T Consensus 84 ~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~-~---------------l~~l-~-~~~~~~~~sv~svafSPDG~~L 144 (588)
T 2j04_A 84 PVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK-M---------------LTNL-D-SKGNLSSRTYHCFEWNPIESSI 144 (588)
T ss_dssp CSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE-E---------------EEEC-C-CSSCSTTTCEEEEEECSSSSCE
T ss_pred CCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc-e---------------eeec-c-CCCccccccEEEEEEcCCCCEE
Confidence 56789999999999 8999999999999999543 1 1111 3 333 59999999999999
Q ss_pred EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCC-------CceE----ecccCCceeeEEEEecCCCCEEEEeccCce
Q 021484 104 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREE-------PQVY----SGHRNSQTVKGVNFFGPNDEYVMSGSDCGH 171 (312)
Q Consensus 104 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~ 171 (312)
+++ .||+|++||+.++ .. +..+ .+|... |.+++| +|+| +++++.|+.
T Consensus 145 Asgs~DGtVkIWd~~~~----------------~l~~~~~i~l~ti~~~~~gh~~~--V~sVaw-SPdg--Laass~D~t 203 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKN----------------SENTPEFYFESSIRLSDAGSKDW--VTHIVW-YEDV--LVAALSNNS 203 (588)
T ss_dssp EEEETTSEEEEEECCCC----------------TTTCCCCEEEEEEECSCTTCCCC--EEEEEE-ETTE--EEEEETTCC
T ss_pred EEEcCCCEEEEEECCCC----------------ccccccceeeeeeeccccccccc--EEEEEE-cCCc--EEEEeCCCe
Confidence 997 5999999999876 22 3555 455544 999999 8999 888899999
Q ss_pred EEEEeccCCee---EEEee-cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCC-CChhhhhhhhcc--CCCC
Q 021484 172 LFIWKKKGGKL---VRLMV-GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQ--GRED 244 (312)
Q Consensus 172 v~iwd~~~~~~---~~~~~-~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~--~~~~ 244 (312)
|++||+..++. ..+++ +|...|.+++|+ +..+|+++ +++|++||+.++....+. +|...+... .+ ++++
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v-a~~~s~d~ 279 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII-PLNHEKES 279 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE-EETTCSSC
T ss_pred EEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE-EeeeCCCC
Confidence 99999987763 35664 788899999999 68899887 799999999988763333 677666543 45 6777
Q ss_pred ceeEEecCCceEEEEEec
Q 021484 245 HSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 245 ~~l~s~~~d~~i~i~~~~ 262 (312)
..++++..+|. ++|.++
T Consensus 280 ~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEECSSCEE-EEEESS
T ss_pred CEEEEEcCCCC-EEEeec
Confidence 88999999999 999865
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=206.82 Aligned_cols=208 Identities=12% Similarity=0.065 Sum_probs=152.1
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCC---------CCCCccccc------ccccccCCCccEEEE
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPIS---------SDTPVDTFC------PRHLIGKNNIHITGL 94 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~------~~~~~~~~~~~i~~~ 94 (312)
...|.+++|+|+| +++|+++.|++|+ |....+.+..-. +.+....+. ...+...|...|.++
T Consensus 15 ~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 15 EDWKNNLTWARDG-TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp SSSSCCEEECTTS-CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred hccEEEEEECCCC-CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 4579999999999 8999999999998 655554331000 000000000 011112557889999
Q ss_pred EEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC---CceeeEEEEecCCCCEEEEeccCc
Q 021484 95 AYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMSGSDCG 170 (312)
Q Consensus 95 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~v~~~s~~~~~l~~~~~dg 170 (312)
+|+|+|+.||++ .||.|++||..+ ++..+. |.. ...+.+++| +|+|++|++|+.||
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~------------------~l~~l~-~~~~~~~~sv~svaf-SPDG~~LAsgs~DG 151 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK------------------MLTNLD-SKGNLSSRTYHCFEW-NPIESSIVVGNEDG 151 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE------------------EEEECC-CSSCSTTTCEEEEEE-CSSSSCEEEEETTS
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc------------------eeeecc-CCCccccccEEEEEE-cCCCCEEEEEcCCC
Confidence 999999999986 599999999532 333334 332 123999999 99999999999999
Q ss_pred eEEEEeccCCe-------eEEEe----ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCC----C-CCChhhh
Q 021484 171 HLFIWKKKGGK-------LVRLM----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP----L-PDNAEKI 234 (312)
Q Consensus 171 ~v~iwd~~~~~-------~~~~~----~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~----~-~~~~~~~ 234 (312)
+|++||+.+++ .+.++ .+|...|.+++|+|+| +++++.|++|++|++.++...+ + .+|...+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 99999999875 35666 5677899999999999 8888999999999998887543 4 3455556
Q ss_pred hhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 235 MKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 235 ~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
.... ++ +..+++++ ++.+++|++.....
T Consensus 230 ~sva-Fs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 230 TDLK-IV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCEE-EE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred EEEE-EE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 5554 44 46777776 69999999876544
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=7.9e-28 Score=207.82 Aligned_cols=212 Identities=11% Similarity=0.258 Sum_probs=169.1
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+. +|...|.+++|++ ..+++|+.||.|++||+.+++.. ..
T Consensus 195 i~vwd~~~~~~~~~~~-----------~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~------------~~ 248 (435)
T 1p22_A 195 VRVWDVNTGEMLNTLI-----------HHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDI------------TL 248 (435)
T ss_dssp EEEEESSSCCEEEEEC-----------CCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCC------------EE
T ss_pred EEEEECCCCcEEEEEc-----------CCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCc------------ee
Confidence 5789998776433332 3788999999975 58999999999999999877521 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
.....+|...|.+++| ++++++++ .|+.|++||+.++ +.+..+.+|... +.+++| +
T Consensus 249 ~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~---~ 305 (435)
T 1p22_A 249 RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC----------------EFVRTLNGHKRG--IACLQY---R 305 (435)
T ss_dssp EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE---E
T ss_pred eeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC----------------cEEEEEcCCCCc--EEEEEe---C
Confidence 2334788999999999 67788886 6999999999987 788888888866 999988 4
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC----------CCCCCC
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD----------FPPLPD 229 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~----------~~~~~~ 229 (312)
++++++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++++.||.|++||+.++. +..+.+
T Consensus 306 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 383 (435)
T 1p22_A 306 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 383 (435)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC
Confidence 789999999999999999999999999999999999999 78899999999999999986543 233455
Q ss_pred ChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 230 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
|...+....+ ++..+++++.|+.+++|++.....
T Consensus 384 h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 384 HSGRVFRLQF---DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CSSCCCCEEE---CSSCEEECCSSSEEEEEC------
T ss_pred CCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence 6666654443 678899999999999999876643
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=4.1e-27 Score=198.15 Aligned_cols=206 Identities=13% Similarity=0.162 Sum_probs=159.9
Q ss_pred CCCccceEEEEEcCCC--CcEEEEEeCCCeEEEEEccC-CeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeE
Q 021484 27 PMNSIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRK-CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 103 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~--~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 103 (312)
.+|...|++++|+|++ +++|++|+.||.|++||+.+ +. .....+.+|...|.+++|+|++++|
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--------------TIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC--------------EEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc--------------eeEEEeccccCCEEEEEECcCCCEE
Confidence 4699999999999984 38999999999999999987 33 2223337799999999999999988
Q ss_pred EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEe-cCCCCEEEEeccCceEEEEeccCCe
Q 021484 104 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 104 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~-s~~~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
+++ .|+.|++||+.++ +. ..+..|... |.+++|. ++++++|++++.||.|++||+++++
T Consensus 102 ~s~~~dg~v~iwd~~~~----------------~~-~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSN----------------QA-IQIAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEETTSEEEEEETTTT----------------EE-EEEEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EEEcCCCcEEEEEcCCC----------------Cc-eeeccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 886 5999999999886 33 345667765 9999983 6788999999999999999999887
Q ss_pred eEEEeecCc-----------------------------------------cceEEEEEcCCCCe----EEEEeCCCcEEE
Q 021484 182 LVRLMVGDR-----------------------------------------HVVNQLEPHPHIPM----FATCGIEKTVKL 216 (312)
Q Consensus 182 ~~~~~~~~~-----------------------------------------~~v~~~~~~p~~~~----l~t~~~d~~i~i 216 (312)
++..+..+. ..+..+.+.++... +++++.|+.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 766665432 22344444444433 999999999999
Q ss_pred ccCCCCC----CCCCCCChhh-----------hhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 217 WAPMPTD----FPPLPDNAEK-----------IMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 217 wd~~~~~----~~~~~~~~~~-----------~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
|++.... ...+..|... .+....+++++.++++++.|+.|++||+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence 9998763 2333334331 23455678889999999999999999987653
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.8e-27 Score=205.26 Aligned_cols=215 Identities=9% Similarity=0.060 Sum_probs=162.5
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe---ecCCCCCCCC--------------------------------
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH---WYSPISSDTP-------------------------------- 74 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~-------------------------------- 74 (312)
..++++++|+|++ ++|+++ .++.|++||+.+++ .+........
T Consensus 4 ~~p~~~v~~s~dg-~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDG-SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSS-SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCC-CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 3478999999999 555555 57899999998887 3322211100
Q ss_pred --c-----ccccccccccCCCccEEEEEEccCCCeE-EEe-cCCcEEEEEcC--CCcCCCCCcCCcccccCCCCCceEec
Q 021484 75 --V-----DTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKN--MGLGPSPLSLSPEDLQKREEPQVYSG 143 (312)
Q Consensus 75 --~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (312)
+ ...........|...|.+++|+|++++| +++ .|+.|++||+. ++ +....+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~----------------~~~~~~~~ 145 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK----------------NVLKLRKR 145 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS----------------SCEEEEEE
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC----------------ceeeeeec
Confidence 0 0000001112456689999999999985 776 59999999998 65 56677764
Q ss_pred ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE----EeecCccceEEEEEcCC---CCeEEEEeCCCcEEE
Q 021484 144 HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR----LMVGDRHVVNQLEPHPH---IPMFATCGIEKTVKL 216 (312)
Q Consensus 144 ~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~p~---~~~l~t~~~d~~i~i 216 (312)
+.....|.+++| +|++++|++++.+|.|++|++.+++... .+.+|...|++++|+|+ +++|++++.|++|++
T Consensus 146 ~~~~~~v~~~~~-sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 146 FCFSKRPNAISI-AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI 224 (450)
T ss_dssp EECSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE
T ss_pred ccCCCCceEEEE-cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE
Confidence 432244999999 9999999999999999999998876543 77789999999999999 999999999999999
Q ss_pred ccCCCCCC-CC-CCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 217 WAPMPTDF-PP-LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 217 wd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
||+.++.. .. +.+|...+... .++ ++.++++++.|+.|++||+....
T Consensus 225 wd~~~~~~~~~~~~~h~~~v~~~-~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 225 SHYPQCFIVDKWLFGHKHFVSSI-CCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEESCTTCEEEECCCCSSCEEEE-EEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred EECCCCceeeeeecCCCCceEEE-EEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 99988764 33 44566666444 466 89999999999999999987654
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2.8e-26 Score=192.88 Aligned_cols=213 Identities=16% Similarity=0.135 Sum_probs=155.8
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 111 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 111 (312)
.+..+++.+.+..++++++.|++|++||+.+++++.. + .+...|.+++|+++. ++.+.++.|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~--------------~--~~~~~v~~v~~~~~~--~~~~~~~~i 121 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR--------------I--KVDAPVKDLFLSREF--IVVSYGDVI 121 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE--------------E--ECSSCEEEEEECSSE--EEEEETTEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE--------------E--ECCCceEEEEEcCCE--EEEEEcCEE
Confidence 4777888887744457788899999999998874322 1 234567777776653 334456667
Q ss_pred EEEEcCCC-c-----------------------CCCCCcCCcccccCCC----------------CCceEecccCCceee
Q 021484 112 YLFEKNMG-L-----------------------GPSPLSLSPEDLQKRE----------------EPQVYSGHRNSQTVK 151 (312)
Q Consensus 112 ~iwd~~~~-~-----------------------~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~v~ 151 (312)
++||+.+. . +.....+..|++.+.. ....+.+|... |.
T Consensus 122 ~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~--v~ 199 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP--IK 199 (355)
T ss_dssp EEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC--EE
T ss_pred EEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc--eE
Confidence 77776654 1 2233444555554433 26778899876 99
Q ss_pred EEEEecCCCCEEEEeccCce-EEEEeccCCeeEEEee-c-CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCC--
Q 021484 152 GVNFFGPNDEYVMSGSDCGH-LFIWKKKGGKLVRLMV-G-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP-- 226 (312)
Q Consensus 152 ~v~~~s~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~-- 226 (312)
+++| +|++++|++|+.|++ |++||+++++++..+. + |...|.+++|+|++++|++++.|++|++||++......
T Consensus 200 ~~~~-s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 200 MVRL-NRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp EEEE-CTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred EEEE-CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc
Confidence 9999 999999999999998 9999999999999998 5 99999999999999999999999999999997653211
Q ss_pred -CCC--------------------ChhhhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 227 -LPD--------------------NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 227 -~~~--------------------~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
+.. ..........+++++..+++++.|+.+++|++....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 100 000001234577888899999999999999987653
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.2e-28 Score=225.61 Aligned_cols=198 Identities=10% Similarity=0.094 Sum_probs=161.4
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
||...|++++|+|++ ++||+|+.||+|++|+..+.+.. .. ..|...|.+++|+| +++|+++
T Consensus 15 gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~~--------------~~--~~~~~~V~~l~fsp-g~~L~S~s 76 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEVV--------------IK--LEDRSAIKEMRFVK-GIYLVVIN 76 (902)
T ss_dssp ECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEEE--------------EE--CSSCCCEEEEEEET-TTEEEEEE
T ss_pred CCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEEE--------------EE--cCCCCCEEEEEEcC-CCEEEEEE
Confidence 488899999999999 89999999999999998766521 11 34678999999999 8888886
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE---
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV--- 183 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--- 183 (312)
.|+.|++||+.++ +.+..+. +... |++++| +|++++|++|+.||.|++||+++++..
T Consensus 77 ~D~~v~lWd~~~~----------------~~~~~~~-~~~~--V~~v~~-sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 77 AKDTVYVLSLYSQ----------------KVLTTVF-VPGK--ITSIDT-DASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp TTCEEEEEETTTC----------------SEEEEEE-CSSC--EEEEEC-CTTCSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CcCeEEEEECCCC----------------cEEEEEc-CCCC--EEEEEE-CCCCCEEEEEcCCCcEEEEECCCCccccce
Confidence 6999999999887 5666665 4444 999999 999999999999999999999988764
Q ss_pred --------EEeecCccceEEEEEcCCC-CeEEEEeCCCcEEEccCCCCCC-CCCCCC------------------hhhhh
Q 021484 184 --------RLMVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDF-PPLPDN------------------AEKIM 235 (312)
Q Consensus 184 --------~~~~~~~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~-~~~~~~------------------~~~~~ 235 (312)
..+.+|.+.|.+++|+|++ ..+++++.|++| +||+++++. ..+..+ ... +
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~-V 214 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK-V 214 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC-E
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC-e
Confidence 1235688999999999964 679999999999 999987652 222212 233 3
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
....+++++.++++++.|+.+++||+++..
T Consensus 215 ~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 215 IQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 555688899999999999999999987653
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.3e-27 Score=203.82 Aligned_cols=221 Identities=9% Similarity=0.035 Sum_probs=152.3
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc--------CCCeEEEe-
Q 021484 36 IVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--------TSELLISY- 106 (312)
Q Consensus 36 ~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~l~s~- 106 (312)
..+.+++ .+|++++.|++|++||..+++... ......+.+|...|.+++|+| ++++|+++
T Consensus 95 ~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~----------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 95 NSSPVYS-LFLACVCQDNTVRLIITKNETIIT----------QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp --CCEEE-EEEEEEETTSCEEEEEEETTEEEE----------EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred eecCCCC-CEEEEEeCCCcEEEEECCCCccce----------eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 3334444 789999999999999999876321 012233489999999999998 78899997
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC-CEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.|++|+|||+.++ .....+.+|... +.+++| +|++ .+|++++.|+.|++||+++++....
T Consensus 164 ~D~tv~~Wd~~~~----------------~~~~~~~~~~~~--v~~v~~-~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~ 224 (393)
T 4gq1_A 164 DDCTLIIWRLTDE----------------GPILAGYPLSSP--GISVQF-RPSNPNQLIVGERNGNIRIFDWTLNLSAEE 224 (393)
T ss_dssp TTSEEEEEEEETT----------------EEEEEEEECSSC--EEEEEE-ETTEEEEEEEEETTSEEEEEETTCCC----
T ss_pred CCCeEEEEECCCC----------------ceeeeecCCCCC--cEEEEE-CCCCCceEEecCCCCEEEEEECCCCccccc
Confidence 5999999999876 566667777765 999999 7876 5899999999999999987764332
Q ss_pred -------------------------eecCccceEEEEEc-CCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhh----
Q 021484 186 -------------------------MVGDRHVVNQLEPH-PHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKI---- 234 (312)
Q Consensus 186 -------------------------~~~~~~~v~~~~~~-p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~---- 234 (312)
..+|...+.++.|+ |+++.+++++.|+++++||+..... ..+..+...+
T Consensus 225 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~ 304 (393)
T 4gq1_A 225 NSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKN 304 (393)
T ss_dssp ------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------C
T ss_pred ccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEE
Confidence 23566778889986 8999999999999999999876542 2222222111
Q ss_pred --------------hhhhccCC-CCceeEEecCCceEEEEEecccCccc---------e-eEeecCCCccCCCCCCC
Q 021484 235 --------------MKANKQGR-EDHSRITLTPDVIMHVLRLQRRQTLA---------Y-RERRYNAADFESDEEEG 286 (312)
Q Consensus 235 --------------~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~ 286 (312)
....+..+ ++.++++++.|+.|++||+.+..... . ..++|++..+++..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 305 LLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp CSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred EccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 11111222 44567889999999999987653321 1 25667777776665543
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=198.56 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=163.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+......... .+|..+|++++|+|++ ++|++++.||.|++||+.++++.
T Consensus 66 i~iw~~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~-------------- 121 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQ---------QMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQAI-------------- 121 (368)
T ss_dssp EEEEEECTTSCEEEEEE---------EECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE--------------
T ss_pred EEEEEcCCCCceeEEEe---------ccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCce--------------
Confidence 57899986332211111 1278899999999988 89999999999999999988632
Q ss_pred cccccCCCccEEEEEE--ccCCCeEEEe-cCCcEEEEEcCCCcCCCC-----------------------CcCCcccccC
Q 021484 81 RHLIGKNNIHITGLAY--SNTSELLISY-NDELVYLFEKNMGLGPSP-----------------------LSLSPEDLQK 134 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~--~~~~~~l~s~-~d~~i~iwd~~~~~~~~~-----------------------~~~~~~~~~~ 134 (312)
. ...|...|.+++| +|++.+|+++ .|+.|++||++++..... ..+..+++..
T Consensus 122 ~--~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 122 Q--IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLEN 199 (368)
T ss_dssp E--EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSS
T ss_pred e--eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecc
Confidence 1 1568899999999 8888888886 599999999987631100 0011111111
Q ss_pred CCCCceEecccCCceeeEEEEecCCCCE----EEEeccCceEEEEeccCC---eeEEEeecCcc------------ceEE
Q 021484 135 REEPQVYSGHRNSQTVKGVNFFGPNDEY----VMSGSDCGHLFIWKKKGG---KLVRLMVGDRH------------VVNQ 195 (312)
Q Consensus 135 ~~~~~~~~~~~~~~~v~~v~~~s~~~~~----l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~------------~v~~ 195 (312)
...............+.++++ .++... +++++.||.|++|+++.. +.+..+..|.. .|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 200 QPSEFRRIESPLKHQHRCVAI-FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SCEEEEECCCSCSSCEEEEEE-EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE
T ss_pred ccchhhhccccccCCCceEEE-cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE
Confidence 100000000000011444444 333333 999999999999999887 56777777776 7999
Q ss_pred EEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 196 LEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 196 ~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
++|+|++++|++++.||.|++||+.+++. ..+..|...+ ....+++++.++++++.|+..+.|++.
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPI-SACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCE-EEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCc-eEEEECCCCCeEEEEeccccccccccc
Confidence 99999999999999999999999998763 5566666665 445588999999999998765555443
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=4.8e-26 Score=195.76 Aligned_cols=220 Identities=16% Similarity=0.259 Sum_probs=174.2
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+++.+....+. +|...+.++++++ .+|++|+.|+.+++||..... ..
T Consensus 171 v~iWd~~~~~~~~~~~-----------~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~--------------~~ 222 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMT-----------SHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAE--------------HH 222 (420)
T ss_dssp EEEEETTTTEEEEEEC-----------CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSS--------------CE
T ss_pred EEEEEcCCCcEEEEEe-----------CCCCceEEEeeCC---CEEEEEeCCCceeEeeecccc--------------ee
Confidence 5789998765433322 3788999998865 689999999999999988654 22
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN 159 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~ 159 (312)
...+.+|...+..+.|+|++.+++++ .|+.+++|+..++.. ....+.....|... |.+++| +|.
T Consensus 223 ~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~------------~~~~~~~~~~~~~~--V~~~~~-~p~ 287 (420)
T 4gga_A 223 VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG------------GWVPLQTFTQHQGA--VKAVAW-CPW 287 (420)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS------------CSCCSEEECCCSSC--EEEEEE-CTT
T ss_pred eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc------------cceeeeeecccCCc--eeeeee-CCC
Confidence 23337899999999999999999986 699999999987521 01234556667755 999999 665
Q ss_pred C-CEEEE--eccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe--CCCcEEEccCCCCC-CCCCCCChhh
Q 021484 160 D-EYVMS--GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTD-FPPLPDNAEK 233 (312)
Q Consensus 160 ~-~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~--~d~~i~iwd~~~~~-~~~~~~~~~~ 233 (312)
+ .++++ |+.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++++ .|+.|+|||+.+++ +..+.+|...
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~ 366 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR 366 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 4 45554 568999999999999999888765 5788999999999987765 79999999998876 4667788887
Q ss_pred hhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 234 IMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 234 ~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
+..+ .+++++.++++++.|++|++|++....
T Consensus 367 V~~l-~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 367 VLSL-TMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEE-EECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEE-EEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 7554 578999999999999999999987553
No 117
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=7.8e-27 Score=209.74 Aligned_cols=238 Identities=13% Similarity=0.134 Sum_probs=184.9
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCC----eecCCCCCCCCcccccccccccCCCcc-EEEEEEcc--CC
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKC----HWYSPISSDTPVDTFCPRHLIGKNNIH-ITGLAYSN--TS 100 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~--~~ 100 (312)
+|...|++++|+|++ ++|++++ ++.|++|++.++ + .... +.+|... |.+++|+| ++
T Consensus 16 ~~~~~v~~~~~spdg-~~l~~~~-~~~v~v~~~~~~~~~~~--------------~~~~-~~~h~~~~v~~~~~sp~~~~ 78 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTT-NAIAYPC-GKSAFVRCLDDGDSKVP--------------PVVQ-FTGHGSSVVTTVKFSPIKGS 78 (615)
T ss_dssp CCTTCCCCCEEETTT-TEEEEEE-TTEEEEEECCSSCCSSC--------------SEEE-ECTTTTSCEEEEEECSSTTC
T ss_pred CccCceeEEEECCCC-CEEEEec-CCeEEEEECCCCCCccc--------------cceE-EecCCCceEEEEEECcCCCC
Confidence 488999999999999 7888887 789999999876 3 2222 2788999 99999999 99
Q ss_pred CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC----ceEEEE
Q 021484 101 ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIW 175 (312)
Q Consensus 101 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d----g~v~iw 175 (312)
++|+++ .|+.|++||+.++... .....+....+..|... |.+++| +|++++|++++.+ +.|++|
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~--------~~~~~~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKES--------NSVEVNVKSEFQVLAGP--ISDISW-DFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGG--------TEEEEEEEEEEECCSSC--EEEEEE-CTTSSEEEEEECCSSCSEEEEET
T ss_pred CEEEEecCCCEEEEEeCCCCccc--------ccccccccchhhccccc--EEEEEE-eCCCCEEEEeccCCCCccEEEEE
Confidence 999997 5999999999632000 00000455667777765 999999 9999999999987 788888
Q ss_pred eccCCeeEEEeecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCCCC-CCCCCChh---hhhhhhccCCC-CceeEE
Q 021484 176 KKKGGKLVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTDF-PPLPDNAE---KIMKANKQGRE-DHSRIT 249 (312)
Q Consensus 176 d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~---~~~~~~~~~~~-~~~l~s 249 (312)
| .++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.+.+. ..+..|.. .+ ....++++ +.++++
T Consensus 148 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 148 D--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFV-RDVEFSPDSGEFVIT 224 (615)
T ss_dssp T--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCE-EEEEECSTTCCEEEE
T ss_pred E--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceE-EEEEECCCCCCEEEE
Confidence 8 5778889999999999999999998 799999999999999887763 44555555 44 44557888 999999
Q ss_pred ecCCceEEEEEecccCcccee--------------EeecCCCccCCCCCCCeEEEeecCCCC
Q 021484 250 LTPDVIMHVLRLQRRQTLAYR--------------ERRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 250 ~~~d~~i~i~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
++.|+.+++|++......... .+. +...+.+...++.+.+++...+.
T Consensus 225 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 225 VGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred EeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence 999999999997654322111 333 55566666677788888876543
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-26 Score=192.89 Aligned_cols=194 Identities=7% Similarity=0.008 Sum_probs=146.8
Q ss_pred CccceEEEEEcC--CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 29 NSIRLNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~p--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
|..+|.+++|+| ++ ++|++++.||+|++||+++++. .......|...+.+++|+|++.+|+++
T Consensus 124 ~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~--------------~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQ--------------YIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCE--------------EEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred CCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcE--------------EEEEecCCCCceEEEEECCCCCEEEEE
Confidence 678899999999 88 8999999999999999998862 121223456679999999999999996
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCC-ceEec-ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP-QVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
.|+.|++||++++ +.. ..+.. |... |.+++| +|++.+|++++ ++.|++||+++++.+
T Consensus 189 ~~dg~i~iwd~~~~----------------~~~~~~~~~~h~~~--v~~l~f-s~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 189 SPDGILDVYNLSSP----------------DQASSRFPVDEEAK--IKEVKF-ADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp CTTSCEEEEESSCT----------------TSCCEECCCCTTSC--EEEEEE-CTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred cCCCEEEEEECCCC----------------CCCccEEeccCCCC--EEEEEE-eCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 5999999999987 455 66777 7765 999999 99999999999 559999999988766
Q ss_pred EEeec---CccceE--EEEEcCCCCeEEEEeC-CCcEEEccCCCCCCCCCCCChhhhhhhhccCC---CCceeEEecCCc
Q 021484 184 RLMVG---DRHVVN--QLEPHPHIPMFATCGI-EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR---EDHSRITLTPDV 254 (312)
Q Consensus 184 ~~~~~---~~~~v~--~~~~~p~~~~l~t~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~s~~~d~ 254 (312)
..+.. |...+. +++|+|++++|++++. |+.|++|++...... .. ... .....+.+ +...+++++.|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 249 LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN-WT--KDE-ESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS-EE--EEE-EEECCC----CCCCEEEEEEETT
T ss_pred eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc-eE--ecC-ceeEecCccccccceeEEEecCC
Confidence 55443 333443 6999999999999998 999999998654321 10 011 12223444 667888899999
Q ss_pred eEEEEEe
Q 021484 255 IMHVLRL 261 (312)
Q Consensus 255 ~i~i~~~ 261 (312)
.+.++-.
T Consensus 325 ~~~~~~~ 331 (343)
T 3lrv_A 325 GIAAILK 331 (343)
T ss_dssp EEEEEEE
T ss_pred ceEEEEe
Confidence 8888753
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.1e-26 Score=195.35 Aligned_cols=209 Identities=9% Similarity=0.092 Sum_probs=146.4
Q ss_pred CCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE-Ee
Q 021484 28 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-SY 106 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~ 106 (312)
+|..+|++++|+|++ .+|++|+.++ +++|++.+.+.. . ..+...+..+++.+++..++ ++
T Consensus 17 ~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~--------------~---~~~~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHI--------------M---SQEMRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp --CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEE--------------E---EEECSCCCEEEECTTSSEEEEEC
T ss_pred cCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCccee--------------e---eeecCCeEEEEEcCCCCEEEEEE
Confidence 488999999999999 7999988765 789998876521 1 11112467788888888664 34
Q ss_pred -cCCcEEEEEcCCCcCC----------------------CCCcCCcccccCC-CCCceEecccCCceeeEEEEecCCCCE
Q 021484 107 -NDELVYLFEKNMGLGP----------------------SPLSLSPEDLQKR-EEPQVYSGHRNSQTVKGVNFFGPNDEY 162 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~----------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~v~~~s~~~~~ 162 (312)
.|+.|++||..++... ....+..|++.+. +.+..+.. . ...+++ ++ .+
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~--~~~~~~-s~--~~ 149 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---F--GGVCEF-SN--GL 149 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---E--EEEEEE-ET--TE
T ss_pred CCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---C--CceEEE-Ec--cE
Confidence 5889999999876200 0011222222222 22222222 1 222333 33 45
Q ss_pred EEE--eccCceEEEEeccCCe---------------e-EEEeecCccceEEEEEcCCCCeEEEEeCCCc-EEEccCCCCC
Q 021484 163 VMS--GSDCGHLFIWKKKGGK---------------L-VRLMVGDRHVVNQLEPHPHIPMFATCGIEKT-VKLWAPMPTD 223 (312)
Q Consensus 163 l~~--~~~dg~v~iwd~~~~~---------------~-~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~-i~iwd~~~~~ 223 (312)
+++ |+.+|.|++||+.+++ + +..+.+|...|++++|+|++++|++++.|++ |++||+++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 555 6889999999998765 2 6788899999999999999999999999998 9999999876
Q ss_pred C-CCCC-C-ChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 224 F-PPLP-D-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 224 ~-~~~~-~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
. ..+. + |...+ ....+++++.++++++.|+.+++|++...
T Consensus 230 ~~~~~~~g~h~~~v-~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 230 LVREFRRGLDRADV-VDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEECTTCCSCE-EEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEEcCCCCCcE-EEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 4 4454 3 55555 45568899999999999999999998654
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=7.2e-27 Score=189.91 Aligned_cols=156 Identities=8% Similarity=0.009 Sum_probs=119.1
Q ss_pred CCccceEEEEEcC---CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccC--CCccEEEEEEccCCCe
Q 021484 28 MNSIRLNAIVIDP---RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK--NNIHITGLAYSNTSEL 102 (312)
Q Consensus 28 ~h~~~v~~~~~~p---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~ 102 (312)
+|+..++.++|+| ++ .+|++|+.|++|+|||+.++++ ...+..+ +...+.+++|+|+|++
T Consensus 176 ~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~--------------l~tL~g~~~~v~~v~~vafSpdG~~ 240 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQL--------------LKKMHIDDSYQASVCHKAYSEMGLL 240 (356)
T ss_dssp ECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCE--------------EEEEECCC---CCCEEEEEEETTEE
T ss_pred cCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcE--------------EEEEcCCCcceeeeEEEEECCCCCE
Confidence 3667778888887 55 7999999999999999999983 2333112 2346778899999986
Q ss_pred E------------EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE-----ecccCCceeeEEEEecCCCCEEE
Q 021484 103 L------------ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTVKGVNFFGPNDEYVM 164 (312)
Q Consensus 103 l------------~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~v~~~s~~~~~l~ 164 (312)
+ +++ .|++|++||..++ +.+..+ .+|... +.+..+ ++.+++
T Consensus 241 lvs~s~~~~~w~laSGs~D~tIklWd~~tg----------------k~l~v~~~~~p~Gh~~~--~lsg~~---sg~~lA 299 (356)
T 2w18_A 241 FIVLSHPCAKESESLRSPVFQLIVINPKTT----------------LSVGVMLYCLPPGQAGR--FLEGDV---KDHCAA 299 (356)
T ss_dssp EEEEC------------CCEEEEEEETTTT----------------EEEEEEEECCCTTCCCC--EEEEEE---ETTEEE
T ss_pred EEEeccCCCcceeeccCCCcEEEEEECCCC----------------EEEEEEEeeccCCCcce--eEcccc---CCCEEE
Confidence 6 445 3899999999877 454443 244433 444444 388999
Q ss_pred EeccCceEEEEeccCCeeEEEeecCccceE-EEEEcCCCCeEEEEeCCCcEEEccC
Q 021484 165 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVN-QLEPHPHIPMFATCGIEKTVKLWAP 219 (312)
Q Consensus 165 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~-~~~~~p~~~~l~t~~~d~~i~iwd~ 219 (312)
+++.|++|+|||+.+++++.++.+|...+. .++|+|+|++|++|+.|++|||||+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999999998887655 6899999999999999999999985
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=189.03 Aligned_cols=244 Identities=12% Similarity=0.141 Sum_probs=174.0
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcE
Q 021484 33 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 111 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i 111 (312)
+++|+||+++ +||+| .|++|+|||+.++++... ....+|...|++++|+|++++|+++ .|+.|
T Consensus 28 ~~~l~WS~~~--~lAvg-~D~tV~iWd~~tg~~~~~-------------~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVA-LDNSVYLWSASSGDILQL-------------LQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTTS--EEEEE-ETTEEEEEETTTCCEEEE-------------EECCSTTCCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceEEEECCCC--EEEEE-eCCEEEEEECCCCCEEEE-------------EEecCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 5789999975 77776 599999999999873211 1125788899999999999999997 59999
Q ss_pred EEEEcCCCcCC------------------------CCCcCCcccc-cCCCCCceEecccCCceeeEEEEecCCCCEEEEe
Q 021484 112 YLFEKNMGLGP------------------------SPLSLSPEDL-QKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG 166 (312)
Q Consensus 112 ~iwd~~~~~~~------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~ 166 (312)
++|++.++... ....+..+.. ........+.+|... +..+.+ ++++++|+++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~l~s~ 168 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRW-APDGRHLASG 168 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEE-CTTSSEEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc--eEEEEE-cCCCCEEEEE
Confidence 99999876410 0000111111 112334556677755 889998 8999999999
Q ss_pred ccCceEEEEeccCCee----EEEeecCccceEEEEEcCCCCeE---EEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhc
Q 021484 167 SDCGHLFIWKKKGGKL----VRLMVGDRHVVNQLEPHPHIPMF---ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANK 239 (312)
Q Consensus 167 ~~dg~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l---~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 239 (312)
+.|+.|++||+++++. ......|.+.|..++++|.+..+ ++++.+++|++||...........+...+.. ..
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~-~~ 247 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCS-IL 247 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEE-EE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeee-ee
Confidence 9999999999987653 34555678899999999987653 4566889999999988764333333333333 33
Q ss_pred cCCCCceeEE--ecCCceEEEEEecccCcc---------ce-eEeecCCCccCCCCCCCeEEEeecCCC
Q 021484 240 QGREDHSRIT--LTPDVIMHVLRLQRRQTL---------AY-RERRYNAADFESDEEEGETYLLGFSDS 296 (312)
Q Consensus 240 ~~~~~~~l~s--~~~d~~i~i~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~ 296 (312)
+.+.+..+++ ++.|+.+++||+++.... +. ..+.|++..+++...++.|.+|++.+.
T Consensus 248 ~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 248 WSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred ecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 4555555554 457999999998654322 22 267888888998888999999998654
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.9e-25 Score=190.10 Aligned_cols=247 Identities=7% Similarity=0.023 Sum_probs=181.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+.. ...+.+++|+|++..++++++.|+.|++||+.++++.
T Consensus 14 v~v~d~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~-------------- 67 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPV------------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI-------------- 67 (391)
T ss_dssp EEEEETTTTEEEEEEEC------------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--------------
T ss_pred EEEEECCCCeEEEEeec------------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--------------
Confidence 57999987764444332 2358999999999445578889999999999988732
Q ss_pred cccccCCCccEEEEEEccCCCeEE-Eec-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLI-SYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~-s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+ .. ...+.+++|+|++++|+ ++. ++.|++||+.++ +....+..+. . +.+++| +|
T Consensus 68 ~~~-~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~----------------~~~~~~~~~~-~--~~~~~~-s~ 125 (391)
T 1l0q_A 68 ATV-PA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN----------------TVAGTVKTGK-S--PLGLAL-SP 125 (391)
T ss_dssp EEE-EC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----------------EEEEEEECSS-S--EEEEEE-CT
T ss_pred EEE-EC-CCCccceEECCCCCEEEEEECCCCEEEEEECCCC----------------eEEEEEeCCC-C--cceEEE-CC
Confidence 222 22 23899999999999665 454 799999999887 5655665443 3 899999 99
Q ss_pred CCCEE-EEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEccCCCCCCCCCCCChhhhhh
Q 021484 159 NDEYV-MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMK 236 (312)
Q Consensus 159 ~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 236 (312)
++++| ++++.++.|++||+.+++.+..+..+. .+..++|+|+++.+ ++++.++.|++||+++++......+...+ .
T Consensus 126 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~ 203 (391)
T 1l0q_A 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAP-S 203 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEE-E
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCc-c
Confidence 99977 688889999999999999988887664 56899999999986 67778999999999887642222222233 3
Q ss_pred hhccCCCCceeEEec---CCceEEEEEecccCcc---------ceeEeecCCCcc-CCCCCCCeEEEeecCCCC
Q 021484 237 ANKQGREDHSRITLT---PDVIMHVLRLQRRQTL---------AYRERRYNAADF-ESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 237 ~~~~~~~~~~l~s~~---~d~~i~i~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 297 (312)
...+++++.++++++ .++.+++||+...... ....+.+++..+ .+...++.+.++|...+.
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 345677888777776 7899999998654222 122556666656 455667889999887653
No 123
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.2e-27 Score=219.50 Aligned_cols=184 Identities=13% Similarity=0.097 Sum_probs=134.6
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.||...+.+++|+|++ ++|++|+.|++|++||+.++.+... .....-....+..+|...|.+++|+|++++||++
T Consensus 432 ~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~----~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg 506 (902)
T 2oaj_A 432 KGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDN----ASFEVNLSRTLNKAKELAVDKISFAAETLELAVS 506 (902)
T ss_dssp CCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTT----BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred cCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCC----ceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence 4667777778889988 8999999999999999988742100 0000000001113788999999999999999997
Q ss_pred -cCCcEEEEEcCCCcCC--------CCCcCCc--ccc-------------------cCCCCCceEecccCCceeeEEEEe
Q 021484 107 -NDELVYLFEKNMGLGP--------SPLSLSP--EDL-------------------QKREEPQVYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~--------~~~~~~~--~~~-------------------~~~~~~~~~~~~~~~~~v~~v~~~ 156 (312)
.|++|++|++.++... ....+.. .++ ...+++..+.+|... |++++|
T Consensus 507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~--V~svaf- 583 (902)
T 2oaj_A 507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK--TSAINN- 583 (902)
T ss_dssp ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS--EEEEEE-
T ss_pred ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc--EEEEEe-
Confidence 5999999999765210 0000000 000 001235667778866 999999
Q ss_pred cCCCCEEEEeccCceEEEEeccCCeeEE--E---ee-cCccceEEEEEc-----CCC---CeEEEEeCCCcEEEccC
Q 021484 157 GPNDEYVMSGSDCGHLFIWKKKGGKLVR--L---MV-GDRHVVNQLEPH-----PHI---PMFATCGIEKTVKLWAP 219 (312)
Q Consensus 157 s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~---~~-~~~~~v~~~~~~-----p~~---~~l~t~~~d~~i~iwd~ 219 (312)
+|+| +|++|+.|++|++||++++..+. . +. +|...|++++|+ |+| ++|++++.|++|++||+
T Consensus 584 SpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 584 SNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp CBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred cCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 9999 99999999999999998877654 2 32 788899999999 886 78999999999999998
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.2e-24 Score=187.64 Aligned_cols=250 Identities=10% Similarity=0.048 Sum_probs=178.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+..... .+|...|.+++|+|++ .++++++.|+.|++||+.+++. .
T Consensus 146 i~~~d~~~g~~~~~~~~~~~------~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~--------------~ 204 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKY------KKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAY--------------K 204 (433)
T ss_dssp EEEEETTTCCEEEECCCHHH------HTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCE--------------E
T ss_pred EEEEECCCCeEeeecCcccc------cccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceE--------------E
Confidence 57888887654432222111 2478899999999988 8999999999999999988762 2
Q ss_pred cccccCCCccEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+ ..|...+.+++|+|+++.+ +++ .++.|++||+.++ +....+..+ ..+.+++| +|
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~----------------~~~~~~~~~---~~~~~~~~-~~ 263 (433)
T 3bws_A 205 ATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK----------------LEIRKTDKI---GLPRGLLL-SK 263 (433)
T ss_dssp EEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT----------------EEEEECCCC---SEEEEEEE-CT
T ss_pred EEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC----------------cEEEEecCC---CCceEEEE-cC
Confidence 222 4677889999999999866 455 5999999999876 455554443 23899999 99
Q ss_pred CCCEEEEec--------cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCCCCCCCC
Q 021484 159 NDEYVMSGS--------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPPLPD 229 (312)
Q Consensus 159 ~~~~l~~~~--------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~~~~~~ 229 (312)
++++|++++ .||.|++||+.+++.+..+ .|...+..++|+|+++. +++++.|+.|++||+.+++......
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 999999888 4889999999999887665 35568899999999986 5666899999999998775422111
Q ss_pred ChhhhhhhhccCCCCceeEEecC---------------CceEEEEEecccCccce---------eEeecCCCccCCC-CC
Q 021484 230 NAEKIMKANKQGREDHSRITLTP---------------DVIMHVLRLQRRQTLAY---------RERRYNAADFESD-EE 284 (312)
Q Consensus 230 ~~~~~~~~~~~~~~~~~l~s~~~---------------d~~i~i~~~~~~~~~~~---------~~~~~~~~~~~~~-~~ 284 (312)
+...+ ....+++++.++++++. |+.+++||+.+...... ..+.|++..+... ..
T Consensus 343 ~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 421 (433)
T 3bws_A 343 VFDKP-NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp CSSSE-EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETT
T ss_pred CCCCC-CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECC
Confidence 22223 34456777777766655 56999999865432211 2445555555433 33
Q ss_pred CCeEEEeecC
Q 021484 285 EGETYLLGFS 294 (312)
Q Consensus 285 ~~~v~~~~~~ 294 (312)
++.+.+++++
T Consensus 422 d~~i~v~~~~ 431 (433)
T 3bws_A 422 DHQIRVYRRD 431 (433)
T ss_dssp TTEEEEEEET
T ss_pred CCeEEEEEec
Confidence 5666666653
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1e-23 Score=179.35 Aligned_cols=213 Identities=12% Similarity=0.101 Sum_probs=160.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+.. ...+.+++|+|++..++++++.++.|++||+.+++..
T Consensus 56 i~v~d~~~~~~~~~~~~------------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~-------------- 109 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPA------------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA-------------- 109 (391)
T ss_dssp EEEEETTTTEEEEEEEC------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--------------
T ss_pred EEEEECCCCeEEEEEEC------------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE--------------
Confidence 57899887664443332 2379999999999445566667899999999988732
Q ss_pred cccccCCCccEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+ . +...+.+++|+|+++.+ +++ .++.|++||+.++ +....+..+. . +.+++| +|
T Consensus 110 ~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----------------~~~~~~~~~~-~--~~~~~~-~~ 167 (391)
T 1l0q_A 110 GTV-K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK----------------AVINTVSVGR-S--PKGIAV-TP 167 (391)
T ss_dssp EEE-E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----------------EEEEEEECCS-S--EEEEEE-CT
T ss_pred EEE-e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC----------------cEEEEEecCC-C--cceEEE-CC
Confidence 111 2 23468999999999966 565 4999999999887 5666666543 2 789999 99
Q ss_pred CCCEE-EEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe---CCCcEEEccCCCCCC-CCCCCChhh
Q 021484 159 NDEYV-MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTDF-PPLPDNAEK 233 (312)
Q Consensus 159 ~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~---~d~~i~iwd~~~~~~-~~~~~~~~~ 233 (312)
++++| ++++.++.|++||+++++.+..+. +...+.+++|+|+++++++++ .++.|++||+.+++. ..+..+. .
T Consensus 168 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~ 245 (391)
T 1l0q_A 168 DGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-D 245 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-S
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-C
Confidence 99887 677889999999999998887776 456789999999999988887 689999999987753 2332222 2
Q ss_pred hhhhhccCCCCcee-EEecCCceEEEEEeccc
Q 021484 234 IMKANKQGREDHSR-ITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 234 ~~~~~~~~~~~~~l-~s~~~d~~i~i~~~~~~ 264 (312)
+ ....+++++..+ ++++.|+.+++||+...
T Consensus 246 ~-~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 246 P-AGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp E-EEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred c-cEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 2 334467777666 78899999999998754
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=1.6e-23 Score=180.45 Aligned_cols=202 Identities=11% Similarity=-0.000 Sum_probs=157.3
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 109 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 109 (312)
..+.+++|+|++ .++++++.++.|++||+.+++.... .......+|...|.+++|++++.+++++ .|+
T Consensus 123 ~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 123 FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRL----------SPPEKYKKKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEE----------CCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeee----------cCcccccccCCceeEEEEcCCCEEEEEECCCC
Confidence 346689999955 7888888999999999998864211 1111225788899999999999988887 599
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEE-EeccCceEEEEeccCCeeEEEeec
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWKKKGGKLVRLMVG 188 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~ 188 (312)
.|++||+.++ +....+..+... +.+++| +|++++++ +++.++.|++||+++++.+..+..
T Consensus 192 ~v~~~d~~~~----------------~~~~~~~~~~~~--~~~~~~-~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 192 AVHVFDLKTL----------------AYKATVDLTGKW--SKILLY-DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp EEEEEETTTC----------------CEEEEEECSSSS--EEEEEE-ETTTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred EEEEEECCCc----------------eEEEEEcCCCCC--eeEEEE-cCCCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 9999999887 677777777755 999999 89998875 555899999999999998888875
Q ss_pred CccceEEEEEcCCCCeEEEEe--------CCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCc-eeEEecCCceEEEE
Q 021484 189 DRHVVNQLEPHPHIPMFATCG--------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVL 259 (312)
Q Consensus 189 ~~~~v~~~~~~p~~~~l~t~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~i~ 259 (312)
+ ..+.+++|+|+++.+++++ .|+.|++||+.+++......+...+ ....+++++. ++++++.++.+++|
T Consensus 253 ~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 253 I-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK-RHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp C-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE-EEEEECSSTTEEEEEETTTTEEEEE
T ss_pred C-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc-ceEEECCCCCEEEEEecCCCEEEEE
Confidence 5 4589999999999988887 5889999999887643322233333 2334667664 56777999999999
Q ss_pred Eeccc
Q 021484 260 RLQRR 264 (312)
Q Consensus 260 ~~~~~ 264 (312)
++...
T Consensus 331 d~~~~ 335 (433)
T 3bws_A 331 DLKEK 335 (433)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98754
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=8.5e-23 Score=175.09 Aligned_cols=196 Identities=10% Similarity=0.105 Sum_probs=150.9
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCC---eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE-
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDE---YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI- 104 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~- 104 (312)
|...+.+++|+|++ +.|++++.++ .|++||+.+++. ..+ ..|...+.+++|+|+|+.|+
T Consensus 177 ~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~---------------~~l-~~~~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 177 SPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAV---------------RQV-ASFPRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp ESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE---------------EEE-ECCSSCEEEEEECTTSSEEEE
T ss_pred CCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcE---------------EEe-ecCCCcccCEEEcCCCCEEEE
Confidence 56789999999999 7888888775 999999998762 111 45677899999999999776
Q ss_pred Eec-CC--cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc-Cc--eEEEEecc
Q 021484 105 SYN-DE--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CG--HLFIWKKK 178 (312)
Q Consensus 105 s~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~-dg--~v~iwd~~ 178 (312)
++. ++ .|++||+.++ + ...+..+... +.+++| +|++++|++++. ++ .|++||+.
T Consensus 240 ~~~~~g~~~i~~~d~~~~----------------~-~~~l~~~~~~--~~~~~~-spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASG----------------Q-IRQVTDGRSN--NTEPTW-FPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp EECTTSSCEEEEEETTTC----------------C-EEECCCCSSC--EEEEEE-CTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEecCCCceEEEEECCCC----------------C-EEeCcCCCCc--ccceEE-CCCCCEEEEEECCCCCcEEEEEECC
Confidence 443 44 4999999876 3 3555666644 899999 999999888776 44 78888998
Q ss_pred CCeeEEEeecCccceEEEEEcCCCCeEEEEeCC---CcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCc-
Q 021484 179 GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE---KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV- 254 (312)
Q Consensus 179 ~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~- 254 (312)
+++. ..+..+...+..++|+|+|++|++++.+ ..|++||+.+++...+..+. ......+++++..++.++.++
T Consensus 300 ~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 300 GGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp SSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS--SCEEEEECTTSSEEEEEEEETT
T ss_pred CCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC--CcCCeEEcCCCCEEEEEEcCCC
Confidence 7764 4455577788999999999998888754 58999999988765555443 334456788888888877766
Q ss_pred --eEEEEEeccc
Q 021484 255 --IMHVLRLQRR 264 (312)
Q Consensus 255 --~i~i~~~~~~ 264 (312)
.+++|++...
T Consensus 377 ~~~l~~~d~~g~ 388 (415)
T 2hqs_A 377 GSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEEEETTSC
T ss_pred ccEEEEEECCCC
Confidence 7888887643
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=3e-23 Score=177.87 Aligned_cols=264 Identities=11% Similarity=0.004 Sum_probs=179.5
Q ss_pred Ceeecc--cCccceeeEEecccccCCcCCCCccceEEEEEcC--------------CCCcEEEEEeCC------CeEEEE
Q 021484 1 MWQFDL--RSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP--------------RNPNYFAVGGSD------EYARVY 58 (312)
Q Consensus 1 v~~wd~--~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p--------------~~~~~l~~~~~d------g~i~iw 58 (312)
|+|||+ .+.+....... .+|...+..+++++ .+ ..++.++.+ +.|++|
T Consensus 95 i~lwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~-~~l~~~s~~~~~~~~~~i~i~ 164 (415)
T 2hqs_A 95 YQLVDTGGAPGTVLAQNSY---------KVNKQWLRYAGHTASDEVFEKLTGIKGAFR-TRIAYVVQTNGGQFPYELRVS 164 (415)
T ss_dssp EEEEECSSSTTCEEEEEEE---------EECGGGHHHHHHHHHHHHHHHHHSSCCCTT-CEEEEEEECSSSSCCEEEEEE
T ss_pred EEEEeCCCCCCCEEeeeEE---------EcChhHHHHHHHHHHHHHHHHHcCCCCcCC-CEEEEEEecCCCCccceEEEE
Confidence 578999 66653211111 12555666666664 14 355555443 799999
Q ss_pred EccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC---cEEEEEcCCCcCCCCCcCCcccccC
Q 021484 59 DIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE---LVYLFEKNMGLGPSPLSLSPEDLQK 134 (312)
Q Consensus 59 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~---~i~iwd~~~~~~~~~~~~~~~~~~~ 134 (312)
|+.... ...+ ..|...+.+++|+|+|+.|+++ .++ .|++||+.++
T Consensus 165 d~~g~~---------------~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg--------------- 213 (415)
T 2hqs_A 165 DYDGYN---------------QFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG--------------- 213 (415)
T ss_dssp ETTSCS---------------CEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---------------
T ss_pred cCCCCC---------------CEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC---------------
Confidence 997542 2222 5678899999999999988886 353 8999999886
Q ss_pred CCCCceEecccCCceeeEEEEecCCCCEEE-EeccCc--eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeC-
Q 021484 135 REEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCG--HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGI- 210 (312)
Q Consensus 135 ~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~-~~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~- 210 (312)
+. ..+..+... +.+++| +|+|++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|+|+.|++++.
T Consensus 214 -~~-~~l~~~~~~--~~~~~~-spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 214 -AV-RQVASFPRH--NGAPAF-SPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp -CE-EEEECCSSC--EEEEEE-CTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred -cE-EEeecCCCc--ccCEEE-cCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECC
Confidence 33 456666654 999999 99999887 666655 499999998876 567778889999999999999888875
Q ss_pred CC--cEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCC---ceEEEEEecccCcc--------ceeEeecCCC
Q 021484 211 EK--TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD---VIMHVLRLQRRQTL--------AYRERRYNAA 277 (312)
Q Consensus 211 d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~i~~~~~~~~~--------~~~~~~~~~~ 277 (312)
++ .|.+||+.+++...+..+...+ ....+++++.+++..+.+ ..+++|++...... ....+.|++.
T Consensus 288 ~g~~~i~~~d~~~~~~~~l~~~~~~~-~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~ 366 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAPQRITWEGSQN-QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGT 366 (415)
T ss_dssp TSSCEEEEEETTSSCCEECCCSSSEE-EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSS
T ss_pred CCCcEEEEEECCCCCEEEEecCCCcc-cCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCC
Confidence 45 6778898887765444444333 334578888888877654 68999998654321 1126677777
Q ss_pred ccCCCCCCC---eEEEeecCCCCCCC--CCCCceeeeecC
Q 021484 278 DFESDEEEG---ETYLLGFSDSDASS--EGGGNQRECIIS 312 (312)
Q Consensus 278 ~~~~~~~~~---~v~~~~~~~~~~~~--~~~~~~~~~~~~ 312 (312)
.+.....++ .+++++...+.... ...+.-.++.||
T Consensus 367 ~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 406 (415)
T ss_dssp EEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEEC
T ss_pred EEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccc
Confidence 666554443 78999986543222 222555555543
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=2.1e-22 Score=173.39 Aligned_cols=223 Identities=12% Similarity=0.067 Sum_probs=148.8
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCC-CCCCcccccccccccCCCccEEEEEEccCCCeEE----
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPIS-SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI---- 104 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~---- 104 (312)
...++.+++++++ .++++++.++ +++|+........... ....+..+..... ..+...|.+++|+|+|++|+
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEe
Confidence 4468899999988 6888888887 9998875322110000 0011111111111 23567899999999999888
Q ss_pred Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC-CCEEEEeccCceEEEEeccCCee
Q 021484 105 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKL 182 (312)
Q Consensus 105 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~-~~~l~~~~~dg~v~iwd~~~~~~ 182 (312)
++ .|+.|++||+.+........ .........+.+|... |.+++| +|+ +++|++++.||+|++||+++++.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~h~~~--V~~v~~-~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQ-----KRPFAYHKLLKDAGGM--VIDMKW-NPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSS-----CCCSEEEECCCSGGGS--EEEEEE-CSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred ccCCCceEEEEEccccccCCcCC-----cceeeeeeccCCCCCc--eEEEEE-CCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 65 49999999986531000000 0000112344567755 999999 887 88999999999999999999887
Q ss_pred EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCC-------ChhhhhhhhccCCCCceeEEec-CC-
Q 021484 183 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-------NAEKIMKANKQGREDHSRITLT-PD- 253 (312)
Q Consensus 183 ~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~s~~-~d- 253 (312)
+....+|...|.+++|+|+|++|++++.||+|++||++......+.. |...+... .|.++..++++.+ .+
T Consensus 185 ~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v-~w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDV-LWIGTYVFAIVYAAADG 263 (434)
T ss_dssp EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEE-EEEETTEEEEEEEETTC
T ss_pred eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEE-EEecCceEEEEEccCCC
Confidence 77777888999999999999999999999999999998332211111 11234333 3555666664433 33
Q ss_pred -----ceEEEEEeccc
Q 021484 254 -----VIMHVLRLQRR 264 (312)
Q Consensus 254 -----~~i~i~~~~~~ 264 (312)
..+++|++...
T Consensus 264 ~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 264 TLETSPDVVMALLPKK 279 (434)
T ss_dssp CSSSCCEEEEEECCCT
T ss_pred ccCCCCceEEEEeccC
Confidence 23889998754
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.3e-20 Score=153.46 Aligned_cols=215 Identities=9% Similarity=0.061 Sum_probs=149.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccC-CeecCCCCCCCCccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK-CHWYSPISSDTPVDTFC 79 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~ 79 (312)
|++||+.+.+...+.. |...|.+++|+|++ ++|++++ ++.|++||+.+ ++..
T Consensus 24 i~~~d~~~~~~~~~~~------------~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~------------- 76 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQ------------TPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPE------------- 76 (297)
T ss_dssp EEEEETTTTEEEEEEE------------ESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCE-------------
T ss_pred EEEEeCCCCceeeecc------------CCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCce-------------
Confidence 5788887765433222 46679999999999 7888876 78999999988 6521
Q ss_pred ccccccCC-CccEEEEEEccCCCeEEEec---CCcEEEE--EcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEE
Q 021484 80 PRHLIGKN-NIHITGLAYSNTSELLISYN---DELVYLF--EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV 153 (312)
Q Consensus 80 ~~~~~~~~-~~~i~~~~~~~~~~~l~s~~---d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v 153 (312)
.+...+ ...+.+++|+|++++|+++. ++...+| ++.++ ....+..+. . +..+
T Consensus 77 --~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~~~~~-~--~~~~ 134 (297)
T 2ojh_A 77 --KVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG-----------------TPRLMTKNL-P--SYWH 134 (297)
T ss_dssp --ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC-----------------CCEECCSSS-S--EEEE
T ss_pred --EeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC-----------------ceEEeecCC-C--ccce
Confidence 111233 46678899999999887753 3445555 44443 233333332 2 7888
Q ss_pred EEecCCCCEEE-EeccCceEEEEeccC-CeeEEEeecCccceEEEEEcCCCCeEEEEe-CCCcEEEccCC--CCCCCCCC
Q 021484 154 NFFGPNDEYVM-SGSDCGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPM--PTDFPPLP 228 (312)
Q Consensus 154 ~~~s~~~~~l~-~~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~--~~~~~~~~ 228 (312)
+| +|++++|+ ++..++.+.+|+++. +.....+..+...+.+++|+|+++.++.++ .++.+++|++. +.....+.
T Consensus 135 ~~-spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 135 GW-SPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EE-CTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred EE-CCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 99 99999887 778899999998542 233456667778899999999999877666 58999999875 34444454
Q ss_pred CChhhhhhhhccCCCCceeEEecCC-----------ceEEEEEecccCc
Q 021484 229 DNAEKIMKANKQGREDHSRITLTPD-----------VIMHVLRLQRRQT 266 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~s~~~d-----------~~i~i~~~~~~~~ 266 (312)
.+...+ ....+++++.+++.++.+ ..+++|++.....
T Consensus 214 ~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 214 DSAYGD-WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CCSEEE-EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCccc-CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 444333 334578888888877665 5699999876543
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=6.5e-21 Score=164.06 Aligned_cols=169 Identities=9% Similarity=0.063 Sum_probs=126.8
Q ss_pred CccceEEEEEcCCCCcEEE----EEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC-CCeE
Q 021484 29 NSIRLNAIVIDPRNPNYFA----VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELL 103 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~----~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 103 (312)
|...|++++|+|++ ++|+ +|+.|+.|++||+.+..... ......+.....+.+|...|.+++|+|+ +.+|
T Consensus 91 ~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 91 MKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEA----KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTT----CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCC----cCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 56679999999999 6777 78899999999997651000 0000001112333678999999999998 6788
Q ss_pred EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCee
Q 021484 104 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 182 (312)
Q Consensus 104 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~ 182 (312)
+++ .|++|++||++++ .......+|... |.+++| +|++++|++|+.||.|++||++ ++.
T Consensus 166 as~s~Dg~v~iwD~~~~----------------~~~~~~~~~~~~--v~~v~w-spdg~~lasgs~dg~v~iwd~~-~~~ 225 (434)
T 2oit_A 166 AVCLADGSIAVLQVTET----------------VKVCATLPSTVA--VTSVCW-SPKGKQLAVGKQNGTVVQYLPT-LQE 225 (434)
T ss_dssp EEEETTSCEEEEEESSS----------------EEEEEEECGGGC--EEEEEE-CTTSSCEEEEETTSCEEEECTT-CCE
T ss_pred EEEECCCeEEEEEcCCC----------------cceeeccCCCCc--eeEEEE-cCCCCEEEEEcCCCcEEEEccC-Ccc
Confidence 886 5999999999876 444455566655 999999 9999999999999999999998 666
Q ss_pred EEEeecC-------ccceEEEEEcCCCCeEEE-EeCCCc------EEEccCCCC
Q 021484 183 VRLMVGD-------RHVVNQLEPHPHIPMFAT-CGIEKT------VKLWAPMPT 222 (312)
Q Consensus 183 ~~~~~~~-------~~~v~~~~~~p~~~~l~t-~~~d~~------i~iwd~~~~ 222 (312)
...+..| ...|.+++|++++.++++ .+.||. +++|++...
T Consensus 226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 6655443 237999999998887654 334533 899998765
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=5.2e-20 Score=154.06 Aligned_cols=255 Identities=6% Similarity=0.027 Sum_probs=167.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|.+||+.+.+....+.. ...+..++|+|++..++++...++.|.+||..+++............
T Consensus 71 v~~~d~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~---- 134 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHN------------DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR---- 134 (353)
T ss_dssp EEEECTTTCCEEEEEEE------------SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC----
T ss_pred EEEEcCCCCeEEEEEec------------CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc----
Confidence 45777776654444432 22467899999995466666778999999999887432211100000
Q ss_pred cccccCCCccEEEEEEccCCCeEEE-e-c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLIS-Y-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s-~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s 157 (312)
........+..++|+|+++.++. . . ++.|.+||..++ +....+..+... +.+++| +
T Consensus 135 --~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~----------------~~~~~~~~~~~~--~~~~~~-s 193 (353)
T 3vgz_A 135 --TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI----------------KLKTAIQNTGKM--STGLAL-D 193 (353)
T ss_dssp --CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT----------------EEEEEECCCCTT--CCCCEE-E
T ss_pred --ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC----------------ceEEEecCCCCc--cceEEE-C
Confidence 00001123688999999986555 3 2 788999999877 555555534433 788898 9
Q ss_pred CCCCEEEEeccCceEEEEeccCCeeEEEeec----CccceEEEEEcCCCCeEEEEe-CCCcEEEccCCCCCC-CCCCCCh
Q 021484 158 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG----DRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDF-PPLPDNA 231 (312)
Q Consensus 158 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~-~~~~~~~ 231 (312)
|++++|++++.++.|.+||+.+++.+..+.. +...+..++|+|+++.++.++ .++.|.+||+.+++. ..+....
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 9999999999999999999999998877764 455678899999999866665 459999999988764 2221111
Q ss_pred hhhhhhhccCCCCc-eeEEecCCceEEEEEecccCccceeEeecCCCccCCCCCCCeEEEeecCC
Q 021484 232 EKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSD 295 (312)
Q Consensus 232 ~~~~~~~~~~~~~~-~l~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 295 (312)
. ....+++++. ++++...++.+.+||+.+...............+....+...+|+...+.
T Consensus 274 -~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 274 -S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -C--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred -C--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 1 2234566766 55666678999999987664433332222223344444554577766543
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=8.6e-20 Score=151.55 Aligned_cols=249 Identities=6% Similarity=-0.054 Sum_probs=162.6
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+.. +...+ .++|+|++..+++++..++.|.+||+.++++ .
T Consensus 22 v~~~d~~~~~~~~~~~~-----------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--------------~ 75 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITL-----------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--------------K 75 (331)
T ss_dssp EEEEETTTCCEEEEEEC-----------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--------------E
T ss_pred EEEEeCcccceeeeEEc-----------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--------------e
Confidence 57889887765444443 23345 9999999943555555589999999998762 0
Q ss_pred cccccCCCccEEEEEEccCCCeEEEec-C-C--cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEe
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISYN-D-E--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~~-d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 156 (312)
...+..+..+..+++|+|+|++++++. + + .|++||+.++ +....+..+. . ..+++|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~----------------~~~~~~~~~~-~--~~~~~~- 135 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN----------------KFISTIPIPY-D--AVGIAI- 135 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT----------------EEEEEEECCT-T--EEEEEE-
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC----------------CeEEEEECCC-C--ccceEE-
Confidence 111133444444599999999887654 3 3 8999999877 5555555433 2 689999
Q ss_pred cCCCCEEEEe-ccCce-EEEEeccCCeeEE----EeecCccceEEEEEcCCCCeEE-EEeCCCcEEEccCCCCCC---C-
Q 021484 157 GPNDEYVMSG-SDCGH-LFIWKKKGGKLVR----LMVGDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMPTDF---P- 225 (312)
Q Consensus 157 s~~~~~l~~~-~~dg~-v~iwd~~~~~~~~----~~~~~~~~v~~~~~~p~~~~l~-t~~~d~~i~iwd~~~~~~---~- 225 (312)
+|++++|+++ ..++. |.+|++.....+. ........+..++|+|++++++ ++..++.|++||+.+++. .
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~ 215 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLN 215 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceee
Confidence 9999866555 45577 9999987543321 1123345678999999999754 445789999999987764 2
Q ss_pred CCCCChhhhhhhhccCCCCceeE-EecCCceEEEEEecccCc------c---------ce----eEeecCCCccC-CCCC
Q 021484 226 PLPDNAEKIMKANKQGREDHSRI-TLTPDVIMHVLRLQRRQT------L---------AY----RERRYNAADFE-SDEE 284 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~i~~~~~~~~------~---------~~----~~~~~~~~~~~-~~~~ 284 (312)
.+. .... .....+++++++++ +...++.+.+|++.+... . .+ ..+++++..+. +..+
T Consensus 216 ~~~-~~~~-~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 216 AVG-TNNL-PGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp EEE-CSSC-CCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred ecc-CCCC-CceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 222 1122 23344778888655 445678899999765432 0 01 14555665553 3455
Q ss_pred CCeEEEeecCCCC
Q 021484 285 EGETYLLGFSDSD 297 (312)
Q Consensus 285 ~~~v~~~~~~~~~ 297 (312)
++.+.+++++...
T Consensus 294 ~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 294 SRELKVFTISGKV 306 (331)
T ss_dssp TTEEEEEETTSCE
T ss_pred CCcEEEEEecCCc
Confidence 6678888886654
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=2.1e-19 Score=149.60 Aligned_cols=202 Identities=12% Similarity=0.174 Sum_probs=134.3
Q ss_pred CccceEEEEEcCCCCcEEEEEeCC-CeEEEEEcc--CCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSD-EYARVYDIR--KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 105 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 105 (312)
|...+.+++|+|++ ++|++++.+ +.|++|++. +++.. ....+ ..+ ..+..++|+|++++|++
T Consensus 36 ~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~------------~~~~~-~~~-~~~~~~~~s~dg~~l~~ 100 (343)
T 1ri6_A 36 VPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALT------------FAAES-ALP-GSLTHISTDHQGQFVFV 100 (343)
T ss_dssp CSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEE------------EEEEE-ECS-SCCSEEEECTTSSEEEE
T ss_pred cCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCcee------------ecccc-ccC-CCCcEEEEcCCCCEEEE
Confidence 45578899999999 667777665 999999997 44321 01111 222 26789999999996655
Q ss_pred -ec-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec-cCceEEEEeccC-Ce
Q 021484 106 -YN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKG-GK 181 (312)
Q Consensus 106 -~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~-~dg~v~iwd~~~-~~ 181 (312)
+. ++.|++||+..+. ..+....+..+. .+.+++| +|+++++++++ .++.|.+||+.+ ++
T Consensus 101 ~~~~~~~i~~~d~~~~~-------------~~~~~~~~~~~~---~~~~~~~-s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGL-------------PVGVVDVVEGLD---GCHSANI-SPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp EETTTTEEEEEEEETTE-------------EEEEEEEECCCT---TBCCCEE-CTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred EecCCCeEEEEECCCCc-------------cccccccccCCC---CceEEEE-CCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 44 8899999994220 002333333322 2788999 99999888777 899999999987 65
Q ss_pred eEE----Eeec-CccceEEEEEcCCCCeEEEEe-CCCcEEEccCCC--CCCC------CCCCC-h-hhhhhhhccCCCCc
Q 021484 182 LVR----LMVG-DRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMP--TDFP------PLPDN-A-EKIMKANKQGREDH 245 (312)
Q Consensus 182 ~~~----~~~~-~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~--~~~~------~~~~~-~-~~~~~~~~~~~~~~ 245 (312)
... .+.. ....+..++|+|+++++++++ .++.|++|++.. +... .++.. . ........+++++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 432 2232 234788999999999765554 889999999954 3221 11111 0 01111244677776
Q ss_pred eeE-EecCCceEEEEEec
Q 021484 246 SRI-TLTPDVIMHVLRLQ 262 (312)
Q Consensus 246 ~l~-s~~~d~~i~i~~~~ 262 (312)
+++ +...++.+++|++.
T Consensus 244 ~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred EEEEEecCCCEEEEEEEc
Confidence 665 66689999999987
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.85 E-value=3.5e-19 Score=157.38 Aligned_cols=249 Identities=10% Similarity=0.078 Sum_probs=170.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEc--cCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDI--RKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~ 78 (312)
|.+||..+.+....+.. +|. +..++|+|++ ++|++++.|++|++||+ .++++
T Consensus 161 V~v~D~~t~~~~~~i~~----------g~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~------------- 214 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDT----------GYA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTK------------- 214 (543)
T ss_dssp EEEEETTTCCEEEEEEC----------STT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEE-------------
T ss_pred EEEEECCCceEEEEEec----------Ccc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcE-------------
Confidence 46888887765444432 122 7899999999 89999999999999999 66652
Q ss_pred cccccccCCCccEEEEEEcc----CCCeEEEe--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc--------
Q 021484 79 CPRHLIGKNNIHITGLAYSN----TSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-------- 144 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~----~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 144 (312)
...+ . +...+..++|+| +|++|+++ .+++|.+||..+. ++++.+..+
T Consensus 215 -~~~i-~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~----------------~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 215 -VAEI-K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL----------------EPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp -EEEE-E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC----------------CEEEEEECCEECSSSCC
T ss_pred -EEEE-e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc----------------ccceeecccCcccCccc
Confidence 2222 2 345678999999 99987775 3899999999877 566666542
Q ss_pred --cCCceeeEEEEecCCCC-EEEEeccCceEEEEeccCCeeEE--EeecCccceEEEEEcCCCCeEEEEe-CCCcEEEcc
Q 021484 145 --RNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWA 218 (312)
Q Consensus 145 --~~~~~v~~v~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd 218 (312)
.. ..+..+.+ ++++. ++++...++.|.+||+.+.+.+. .+. +...+.++.|+|+++++++++ .+++|.+||
T Consensus 276 ~~~~-~~v~~i~~-s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 276 YHPE-PRVAAIIA-SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp EESC-CCEEEEEE-CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred cccC-CceEEEEE-CCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 11 13788988 77654 56777889999999998765443 443 556678899999999866554 689999999
Q ss_pred CCCCCCC-CCCC----ChhhhhhhhccCCC-CceeEEec-CCceEEEEEeccc-------C----------ccceeEeec
Q 021484 219 PMPTDFP-PLPD----NAEKIMKANKQGRE-DHSRITLT-PDVIMHVLRLQRR-------Q----------TLAYRERRY 274 (312)
Q Consensus 219 ~~~~~~~-~~~~----~~~~~~~~~~~~~~-~~~l~s~~-~d~~i~i~~~~~~-------~----------~~~~~~~~~ 274 (312)
+.++++. .+.. |.... .++..++ +..+++.. .|+.|.+|++... . ....+...|
T Consensus 353 ~~tg~l~~~i~~g~~ph~g~g--~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p 430 (543)
T 1nir_A 353 SKDRRLSALVDVGKTPHPGRG--ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP 430 (543)
T ss_dssp TTTTEEEEEEECSSSBCCTTC--EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT
T ss_pred CCCCeEEEeeccCCCCCCCCC--cccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC
Confidence 9988642 2221 22222 1223454 56667765 6799999998761 1 112234556
Q ss_pred CCCccCCCC----C---CCeEEEeecCCCCCC
Q 021484 275 NAADFESDE----E---EGETYLLGFSDSDAS 299 (312)
Q Consensus 275 ~~~~~~~~~----~---~~~v~~~~~~~~~~~ 299 (312)
++..+..+. + ++.|.++|..+++..
T Consensus 431 dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 431 KSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 665555543 1 456888888776643
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=2.1e-19 Score=165.21 Aligned_cols=213 Identities=12% Similarity=0.096 Sum_probs=145.2
Q ss_pred ccceEEEEEcCCCCcEEEEEeC-CC-----eEEEEEccCCeecCCCCCCCCc---ccccc--ccc----ccCCCccEEEE
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGS-DE-----YARVYDIRKCHWYSPISSDTPV---DTFCP--RHL----IGKNNIHITGL 94 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~---~~~~~--~~~----~~~~~~~i~~~ 94 (312)
...+.+++|+|+| +.|++++. |+ .|++||+.+++........... ..+.. ... .......+..+
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4569999999999 78888887 88 9999999987632211100000 00000 000 00000337789
Q ss_pred EEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCC--CCceEecccCCceeeEEEEecCCCCEEEEeccCceE
Q 021484 95 AYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 172 (312)
Q Consensus 95 ~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v 172 (312)
+|+|+|++|+++.++.|++||+.++ . ....+..+... +..++| +|+|++|+.++ ++.|
T Consensus 115 ~~SpDg~~l~~~~~~~i~~~d~~~~----------------~~~~~~~l~~~~~~--~~~~~~-SPDG~~la~~~-~~~i 174 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGGELYLYDLKQE----------------GKAAVRQLTHGEGF--ATDAKL-SPKGGFVSFIR-GRNL 174 (741)
T ss_dssp EECTTSSEEEEEETTEEEEEESSSC----------------STTSCCBCCCSSSC--EEEEEE-CTTSSEEEEEE-TTEE
T ss_pred EECCCCCEEEEEeCCcEEEEECCCC----------------CcceEEEcccCCcc--cccccC-CCCCCEEEEEe-CCcE
Confidence 9999999999887799999999875 2 34445555544 899999 99999999887 4699
Q ss_pred EEEeccCCeeEEEeecCccc----------------eEEEEEcCCCCeEEEEeCCC------------------------
Q 021484 173 FIWKKKGGKLVRLMVGDRHV----------------VNQLEPHPHIPMFATCGIEK------------------------ 212 (312)
Q Consensus 173 ~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~p~~~~l~t~~~d~------------------------ 212 (312)
++||+.+++.......+... +..++|+|+|+.|++++.|+
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 99999988776554444332 47799999999999988765
Q ss_pred ---------cEEEccCCC-CCCCCCC---CChhhhhhhhccCCCCceeEEec-----CCceEEEEEecccC
Q 021484 213 ---------TVKLWAPMP-TDFPPLP---DNAEKIMKANKQGREDHSRITLT-----PDVIMHVLRLQRRQ 265 (312)
Q Consensus 213 ---------~i~iwd~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~~-----~d~~i~i~~~~~~~ 265 (312)
.|++||+.+ ++...+. .+...+.. ..| +++..++..+ .+..|++||+.+..
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLAR-VNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEE-EEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEE-EEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 889999988 7653322 23333433 346 8777777544 35678888876543
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=4.7e-19 Score=147.12 Aligned_cols=221 Identities=9% Similarity=0.013 Sum_probs=150.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCcc-ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSI-RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFC 79 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 79 (312)
|++||+.+.+....+... +.. .+..++|+|++..+++++..++.|.+||+.+++..... .
T Consensus 13 v~~~d~~~~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~---------~ 73 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIA----------DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI---------D 73 (337)
T ss_dssp EEEEETTTTEEEEEEECT----------TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE---------E
T ss_pred EEEEECCCCcEEEEEEcC----------CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeE---------E
Confidence 578998876544433321 111 36789999998555667777899999999887632111 0
Q ss_pred ccccccCCCccEEEEEEccCCCeEEEe-------------cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC
Q 021484 80 PRHLIGKNNIHITGLAYSNTSELLISY-------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN 146 (312)
Q Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~l~s~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (312)
... ...|...+..++|+|+|++++++ .++.|++||+.++ +....+.. ..
T Consensus 74 ~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~----------------~~~~~~~~-~~ 135 (337)
T 1pby_B 74 LST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL----------------SRRKAFEA-PR 135 (337)
T ss_dssp CCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT----------------EEEEEEEC-CS
T ss_pred cCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC----------------cEEEEEeC-CC
Confidence 000 00012246688999999877665 4699999999876 45555543 22
Q ss_pred CceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc------------------------------------
Q 021484 147 SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR------------------------------------ 190 (312)
Q Consensus 147 ~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------------------------ 190 (312)
. +.+++| +|++++|+++ ++.|.+||+.+++.+..+..+.
T Consensus 136 ~--~~~~~~-s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 210 (337)
T 1pby_B 136 Q--ITMLAW-ARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID 210 (337)
T ss_dssp S--CCCEEE-CTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC
T ss_pred C--cceeEE-CCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccc
Confidence 2 778888 9999988887 6889999998887665443221
Q ss_pred ------------------------------cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhc
Q 021484 191 ------------------------------HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANK 239 (312)
Q Consensus 191 ------------------------------~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~ 239 (312)
..+..++|+|++++++++ ++.|++||+.+++. ..+. ....+ ....
T Consensus 211 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~-~~~~ 286 (337)
T 1pby_B 211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSY-YSVN 286 (337)
T ss_dssp TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCC-CEEE
T ss_pred cccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-CCCce-eeEE
Confidence 134468999999998887 69999999987753 2221 11122 2334
Q ss_pred cCCCCceeEEecCCceEEEEEecccCcc
Q 021484 240 QGREDHSRITLTPDVIMHVLRLQRRQTL 267 (312)
Q Consensus 240 ~~~~~~~l~s~~~d~~i~i~~~~~~~~~ 267 (312)
+++++.++++++.++.+++|++.+....
T Consensus 287 ~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 287 VSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp ECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred ECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 6778888888888999999998776443
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=9.3e-20 Score=167.51 Aligned_cols=195 Identities=7% Similarity=0.026 Sum_probs=143.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCC---eecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKC---HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 108 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d 108 (312)
.|.+++|+|++ +.|++++. +.|++||+.++ +.. . +..|...+..++|+|+|++|+.+.+
T Consensus 110 ~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~---------------~-l~~~~~~~~~~~~SPDG~~la~~~~ 171 (741)
T 2ecf_A 110 GIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVR---------------Q-LTHGEGFATDAKLSPKGGFVSFIRG 171 (741)
T ss_dssp ESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCC---------------B-CCCSSSCEEEEEECTTSSEEEEEET
T ss_pred CcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEE---------------E-cccCCcccccccCCCCCCEEEEEeC
Confidence 48899999999 78888776 99999999877 311 1 1456678999999999999999888
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC--------------ceeeEEEEecCCCCEEEEeccCc----
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS--------------QTVKGVNFFGPNDEYVMSGSDCG---- 170 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~v~~v~~~s~~~~~l~~~~~dg---- 170 (312)
+.|++||+.++ +..+....+... ..+..++| +|+|++|++++.|+
T Consensus 172 ~~i~~~d~~~g----------------~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~-SpDg~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 172 RNLWVIDLASG----------------RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWW-APDDSAIAYARIDESPVP 234 (741)
T ss_dssp TEEEEEETTTT----------------EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEE-CTTSSCEEEEEEECTTSC
T ss_pred CcEEEEecCCC----------------CEEEeccCCccceeccccceeeeeccccccceEE-CCCCCEEEEEEEcCCCCc
Confidence 89999999876 222222212110 01477899 99999999987765
Q ss_pred -----------------------------eEEEEeccC-CeeEEEee--cCccceEEEEEcCCCCeEEEEeC-----CCc
Q 021484 171 -----------------------------HLFIWKKKG-GKLVRLMV--GDRHVVNQLEPHPHIPMFATCGI-----EKT 213 (312)
Q Consensus 171 -----------------------------~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~p~~~~l~t~~~-----d~~ 213 (312)
.|++||+.+ ++...... .|...+..++| |+|+.|++++. +..
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~ 313 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD 313 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE
Confidence 899999998 87655443 36778999999 99999887653 568
Q ss_pred EEEccCCCCCCCCCCC-Chhh---hhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 214 VKLWAPMPTDFPPLPD-NAEK---IMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 214 i~iwd~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
|++||+.+++...+.. +... ......++++++++++.+.++..++|.+.
T Consensus 314 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 314 LVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 9999998876433221 1111 12234577888888888999988888775
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=1.6e-19 Score=165.52 Aligned_cols=221 Identities=12% Similarity=0.053 Sum_probs=149.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCC---------CeEEEEEccCCeecCCCCC
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSPISS 71 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~ 71 (312)
|++||+.+.+...++..... +...|.+++|||++ ++|++++.+ +.+++||+.+++...
T Consensus 39 i~~~d~~~g~~~~~~~~~~~--------~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~---- 105 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKI--------ESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS---- 105 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTT--------TTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE----
T ss_pred EEEEECCCCcEEEEeccccc--------cccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceEe----
Confidence 57899888765544432110 11248999999999 788888764 788899999876210
Q ss_pred CCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC----
Q 021484 72 DTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS---- 147 (312)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 147 (312)
. .....|...+..++|+|+|+.|+.++++.|++||+.++ +..+....+...
T Consensus 106 --------l-~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g----------------~~~~~~~~~~~~~~~~ 160 (723)
T 1xfd_A 106 --------L-DPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGK----------------QAIRVVSTGKEGVIYN 160 (723)
T ss_dssp --------C-CCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSS----------------CCEEEECCCBTTTEEE
T ss_pred --------c-cCCccccccccccEECCCCCEEEEEECCeEEEEECCCC----------------ceEEEecCCCCCceEC
Confidence 0 01134455578899999999999988899999999876 343333332221
Q ss_pred ------------ceeeEEEEecCCCCEEEEeccCc----------------------------------eEEEEeccCCe
Q 021484 148 ------------QTVKGVNFFGPNDEYVMSGSDCG----------------------------------HLFIWKKKGGK 181 (312)
Q Consensus 148 ------------~~v~~v~~~s~~~~~l~~~~~dg----------------------------------~v~iwd~~~~~ 181 (312)
..+.+++| +|+|++|++++.++ .|++||+.+++
T Consensus 161 g~~~~v~~ee~~~~~~~~~~-SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~ 239 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWW-SPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT 239 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEE-CTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred cccceeEEEEeccCcceEEE-CCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc
Confidence 01378999 99999999887543 89999999888
Q ss_pred eEEEeecC------ccceEEEEEcCCCCeEEEEeC----CCcEEEccCCCCCCCCCC-CC-hhhhh---hhhccCCCCce
Q 021484 182 LVRLMVGD------RHVVNQLEPHPHIPMFATCGI----EKTVKLWAPMPTDFPPLP-DN-AEKIM---KANKQGREDHS 246 (312)
Q Consensus 182 ~~~~~~~~------~~~v~~~~~~p~~~~l~t~~~----d~~i~iwd~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~~ 246 (312)
....+..+ ...+..++|+|+|+++++.+. +..|++||+.+++...+. .+ ...+. ....+++++..
T Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 240 HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRK 319 (723)
T ss_dssp CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCS
T ss_pred eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCe
Confidence 65666654 567899999999998876653 357999999887643221 11 11111 23457888886
Q ss_pred eEE--ecCCc------eEEEEE
Q 021484 247 RIT--LTPDV------IMHVLR 260 (312)
Q Consensus 247 l~s--~~~d~------~i~i~~ 260 (312)
++. ...++ .+.+|+
T Consensus 320 l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 320 FFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEEEEECCSSSSCEEEEEEEC
T ss_pred EEEEEecccCCCcceeEEEEEe
Confidence 664 44566 455565
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=2.1e-19 Score=164.31 Aligned_cols=196 Identities=11% Similarity=0.041 Sum_probs=141.8
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCc
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 110 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 110 (312)
..|.+++|+|++ .++++ .++.|++||+.+++.. .+ ..+...+..++|+|+|+.|+++.++.
T Consensus 82 ~~v~~~~~spd~-~~~~~--~~~~i~~~d~~~~~~~---------------~l-~~~~~~~~~~~~SpdG~~la~~~~~~ 142 (706)
T 2z3z_A 82 FPSFRTLDAGRG-LVVLF--TQGGLVGFDMLARKVT---------------YL-FDTNEETASLDFSPVGDRVAYVRNHN 142 (706)
T ss_dssp CCCEEEEETTTT-EEEEE--ETTEEEEEETTTTEEE---------------EE-ECCTTCCTTCEECTTSSEEEEEETTE
T ss_pred cCceeEEECCCC-eEEEE--ECCEEEEEECCCCceE---------------Ec-cCCcccccCCcCCCCCCEEEEEECCe
Confidence 469999999993 55555 3599999999887631 11 23455677889999999999888999
Q ss_pred EEEEEcCC-----CcCCCCCcCCcccccCCCCCceEecccCC------------ceeeEEEEecCCCCEEEEec------
Q 021484 111 VYLFEKNM-----GLGPSPLSLSPEDLQKREEPQVYSGHRNS------------QTVKGVNFFGPNDEYVMSGS------ 167 (312)
Q Consensus 111 i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~v~~~s~~~~~l~~~~------ 167 (312)
|++|++.+ + +..+....+... ..+.+++| +|+|++|++++
T Consensus 143 i~v~~~~~~~~~~g----------------~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~-SpDg~~la~~~~d~~~~ 205 (706)
T 2z3z_A 143 LYIARGGKLGEGMS----------------RAIAVTIDGTETLVYGQAVHQREFGIEKGTFW-SPKGSCLAFYRMDQSMV 205 (706)
T ss_dssp EEEEECBCTTSCCC----------------CCEESCSCCBTTEEESSCCGGGCTTCCCSEEE-CTTSSEEEEEEEECTTS
T ss_pred EEEEecCcccccCC----------------CcEEeccCCCCCeEcccchhhhhcCCCceEEE-CCCCCEEEEEEECCCCC
Confidence 99999987 5 222211111110 11578999 99999999887
Q ss_pred ---------------------------cCceEEEEeccCCeeEEEee--cCccceEEEEEcCCCCeEEEEeCCC-----c
Q 021484 168 ---------------------------DCGHLFIWKKKGGKLVRLMV--GDRHVVNQLEPHPHIPMFATCGIEK-----T 213 (312)
Q Consensus 168 ---------------------------~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~t~~~d~-----~ 213 (312)
.+..|++||+.+++...... .|...+..++|+|+|+.|++++.++ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 285 (706)
T 2z3z_A 206 KPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECK 285 (706)
T ss_dssp CCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEE
T ss_pred ceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeE
Confidence 45789999999888654442 4567799999999999998887775 8
Q ss_pred EEEccCCCC-CCCCCCCCh-hh---hhhhhccCC--CCceeEEecCCceEEEEEec
Q 021484 214 VKLWAPMPT-DFPPLPDNA-EK---IMKANKQGR--EDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 214 i~iwd~~~~-~~~~~~~~~-~~---~~~~~~~~~--~~~~l~s~~~d~~i~i~~~~ 262 (312)
|++||+.++ ....+.... .. ......+++ ++.+++++..++.+++|.+.
T Consensus 286 v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 286 VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 999999887 332221111 11 112345777 88899999999999999876
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=1.3e-18 Score=153.72 Aligned_cols=229 Identities=10% Similarity=0.116 Sum_probs=160.3
Q ss_pred CeeecccCccceeeEEecccc-cCCcCCCCcc-ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFS-ENSKQPMNSI-RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~-~~~~~~~h~~-~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|.+||..+.+....+...... ....+ |+. .+.++.++|+++.++++...+++|.+||+.+.+..
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~--~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l------------ 315 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTY--HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL------------ 315 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCE--ESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC------------
T ss_pred EEEEeccccccceeecccCcccCcccc--ccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc------------
Confidence 468898887766555442110 00000 233 78999999988788888899999999999876521
Q ss_pred cccccccCCCccEEEEEEccCCCeEEE-ec-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec----ccCCceeeE
Q 021484 79 CPRHLIGKNNIHITGLAYSNTSELLIS-YN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG----HRNSQTVKG 152 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~ 152 (312)
.... ..+...+..++|+|+|+++++ +. +++|.+||+.++ ++...+.. |... .
T Consensus 316 ~~~~--i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg----------------~l~~~i~~g~~ph~g~----g 373 (543)
T 1nir_A 316 TVTS--IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR----------------RLSALVDVGKTPHPGR----G 373 (543)
T ss_dssp EEEE--EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT----------------EEEEEEECSSSBCCTT----C
T ss_pred eeEE--eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC----------------eEEEeeccCCCCCCCC----C
Confidence 0001 123456778999999996654 44 899999999987 66666664 3321 2
Q ss_pred EEEecCC-CCEEEEec-cCceEEEEeccC-------CeeEEEeecCccceEEEEEcCCCCeEEEEe-------CCCcEEE
Q 021484 153 VNFFGPN-DEYVMSGS-DCGHLFIWKKKG-------GKLVRLMVGDRHVVNQLEPHPHIPMFATCG-------IEKTVKL 216 (312)
Q Consensus 153 v~~~s~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~-------~d~~i~i 216 (312)
+.|.+|+ +..++++. .|++|.+||+.+ .+++.++.+|...+..++++|++++|++++ .+++|.+
T Consensus 374 ~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 374 ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred cccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 2333566 66667765 589999999998 899999999988888999999999999987 2779999
Q ss_pred ccCCCCCCC-CC---------CCChhhhhhhhccCCCCceeEEe-----cCCceEEEEEecccCc
Q 021484 217 WAPMPTDFP-PL---------PDNAEKIMKANKQGREDHSRITL-----TPDVIMHVLRLQRRQT 266 (312)
Q Consensus 217 wd~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~l~s~-----~~d~~i~i~~~~~~~~ 266 (312)
||+.+.+.. .. ..+...+... .+.+++..+... +.++.|.+||.++...
T Consensus 454 ~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 454 FDLKNLDAKYQVLPIAEWADLGEGAKRVVQP-EYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp EETTCTTSCCEEECHHHHHCCCSSCCEEEEE-EECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred EECCCCCCCeEEeechhhcccCCCCCceEec-cCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 999987743 21 2333444333 366777666643 3579999999877643
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=9e-19 Score=142.47 Aligned_cols=206 Identities=13% Similarity=0.168 Sum_probs=139.4
Q ss_pred CeeecccC-ccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEe--CCCeEEEEEcc--CCeecCCCCCCCCc
Q 021484 1 MWQFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG--SDEYARVYDIR--KCHWYSPISSDTPV 75 (312)
Q Consensus 1 v~~wd~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~--~dg~i~iwd~~--~~~~~~~~~~~~~~ 75 (312)
|++||+.+ .+...+... . +...+.+++|+|++ +.|++++ .++..++|.+. +++
T Consensus 64 i~~~d~~~~~~~~~~~~~---~-------~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~----------- 121 (297)
T 2ojh_A 64 LYRLSLAGDPSPEKVDTG---F-------ATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT----------- 121 (297)
T ss_dssp EEEEESSSCCSCEECCCT---T-------CCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC-----------
T ss_pred EEEEeCCCCCCceEeccc---c-------ccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc-----------
Confidence 46788877 543333211 1 24678899999999 7888887 34556666554 332
Q ss_pred ccccccccccCCCccEEEEEEccCCCeEE-Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEE
Q 021484 76 DTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGV 153 (312)
Q Consensus 76 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v 153 (312)
...+ .. ...+..++|+|+++.|+ ++ .++.+++|++.... .....+..+... +.++
T Consensus 122 ----~~~~-~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---------------~~~~~~~~~~~~--~~~~ 178 (297)
T 2ojh_A 122 ----PRLM-TK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---------------GVETRLTHGEGR--NDGP 178 (297)
T ss_dssp ----CEEC-CS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---------------CCEEECCCSSSC--EEEE
T ss_pred ----eEEe-ec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCC---------------CcceEcccCCCc--cccc
Confidence 1111 22 23488899999999766 44 58989999864320 233444445544 8999
Q ss_pred EEecCCCCEEEEec-cCceEEEEecc-CCeeEEEeecCccceEEEEEcCCCCeEEEEeCC-----------CcEEEccCC
Q 021484 154 NFFGPNDEYVMSGS-DCGHLFIWKKK-GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE-----------KTVKLWAPM 220 (312)
Q Consensus 154 ~~~s~~~~~l~~~~-~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d-----------~~i~iwd~~ 220 (312)
+| +|++++|+.++ .++.+.+|++. .+..+..+..|...+..++|+|++++|++++.+ +.|.+||+.
T Consensus 179 ~~-s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 179 DY-SPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EE-CTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred eE-CCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 99 99999887665 58999999886 556677787788889999999999998888765 569999998
Q ss_pred CCCCCCCC---CChhhhhhhhccCCCCceeEEecCC
Q 021484 221 PTDFPPLP---DNAEKIMKANKQGREDHSRITLTPD 253 (312)
Q Consensus 221 ~~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~~~d 253 (312)
+++...+. ++...+ ....+++++..+++++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 258 GGNVETLFDLFGGQGTM-NSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SCSCEEEEEEEESTTTS-CSCCBCTTSSEEEEEEEC
T ss_pred CCCceeeeccCCCCccc-ccceECCCCCEEEEEEec
Confidence 87653322 233333 334567777777666544
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=2.4e-18 Score=143.57 Aligned_cols=217 Identities=9% Similarity=0.028 Sum_probs=146.3
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||+.+.+....+... ....+..++|+|++..+++++..++.|.+||+.+++....
T Consensus 23 v~~~d~~~~~~~~~~~~~----------~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~------------ 80 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMP----------DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH------------ 80 (349)
T ss_dssp EEEEETTTTEEEEEEECS----------SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE------------
T ss_pred EEEEECCCCcEEEEEecC----------CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE------------
Confidence 578998876644444332 1124678999999944556667789999999998873211
Q ss_pred cccccCC-----CccEEEEEEccCCCeEEEec-C------------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe
Q 021484 81 RHLIGKN-----NIHITGLAYSNTSELLISYN-D------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS 142 (312)
Q Consensus 81 ~~~~~~~-----~~~i~~~~~~~~~~~l~s~~-d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (312)
+...+ ...+..++|+|+|++|+++. + +.|.+||+.++. ..+....+.
T Consensus 81 --~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-------------~~~~~~~~~ 145 (349)
T 1jmx_B 81 --ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL-------------EAKPVRTFP 145 (349)
T ss_dssp --EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG-------------GBCCSEEEE
T ss_pred --EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc-------------ccceeeecc
Confidence 10111 23367889999999877754 4 899999998741 002233333
Q ss_pred cccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc--------------------------------
Q 021484 143 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------------------------- 190 (312)
Q Consensus 143 ~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------------------------- 190 (312)
.+. .+.+++| +|+++ +++++. .|++||+.+++.+..+..+.
T Consensus 146 ~~~---~~~~~~~-s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T 1jmx_B 146 MPR---QVYLMRA-ADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR 218 (349)
T ss_dssp CCS---SCCCEEE-CTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred CCC---cccceeE-CCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence 222 2788999 99999 555544 49999999888776664331
Q ss_pred ------------------------------------cceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCC-CCCCCChh
Q 021484 191 ------------------------------------HVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAE 232 (312)
Q Consensus 191 ------------------------------------~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~ 232 (312)
..+..++|+| ++++++++ ++.|.+||+.+++. ..+. ...
T Consensus 219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~ 295 (349)
T 1jmx_B 219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDH 295 (349)
T ss_dssp C-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSS
T ss_pred cCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCC
Confidence 1345677889 99998887 88999999988764 2221 111
Q ss_pred hhhhhhccCCCCceeEEecCCceEEEEEecccC
Q 021484 233 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
.+ ....+++++.++++.+.++.+++||+.+..
T Consensus 296 ~~-~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 296 TY-YCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CC-CEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred Cc-cceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 12 234567788888878888999999987654
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=1.1e-18 Score=159.60 Aligned_cols=263 Identities=10% Similarity=0.079 Sum_probs=160.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccC-----CeecCCCCCCCC-
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK-----CHWYSPISSDTP- 74 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~- 74 (312)
|++||+.+.+...+.. +...+.+++|+|++ +.|+.+ .++.|++|++.+ ++..........
T Consensus 103 i~~~d~~~~~~~~l~~------------~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFD------------TNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp EEEEETTTTEEEEEEC------------CTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred EEEEECCCCceEEccC------------CcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCC
Confidence 4788887765333221 34567889999999 677774 689999999988 653221110000
Q ss_pred cccccccccccCCCccEEEEEEccCCCeEEEec----------------------------------CCcEEEEEcCCCc
Q 021484 75 VDTFCPRHLIGKNNIHITGLAYSNTSELLISYN----------------------------------DELVYLFEKNMGL 120 (312)
Q Consensus 75 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~----------------------------------d~~i~iwd~~~~~ 120 (312)
+..-.. ....+...+.+++|+|+|++|++++ +..|++||+.++
T Consensus 169 ~~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~- 245 (706)
T 2z3z_A 169 LVYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG- 245 (706)
T ss_dssp EEESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-
T ss_pred eEcccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-
Confidence 000000 0011123357899999999888753 356899999876
Q ss_pred CCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCc-----eEEEEeccCCeeEEEee--cCcc--
Q 021484 121 GPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG-----HLFIWKKKGGKLVRLMV--GDRH-- 191 (312)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~--~~~~-- 191 (312)
+.............+.+++| +|++++|++++.++ .|++||+.+++....+. .+..
T Consensus 246 ---------------~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 246 ---------------KTVYLQTGEPKEKFLTNLSW-SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp ---------------EEEECCCCSCTTCEEEEEEE-CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred ---------------ceEeeccCCCCceeEeeEEE-ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 32222221111234899999 99999999887765 99999999984333332 2222
Q ss_pred -ceEEEEEcC--CCCeEEEEeCCCcEEEccCC--CCCCCCCCCChhhhhhhhccCCCCceeE-EecCCc----eEEEEEe
Q 021484 192 -VVNQLEPHP--HIPMFATCGIEKTVKLWAPM--PTDFPPLPDNAEKIMKANKQGREDHSRI-TLTPDV----IMHVLRL 261 (312)
Q Consensus 192 -~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~----~i~i~~~ 261 (312)
.+..++|+| +|+++++++.|+.++||.+. ++.+..+..+...+.....+++++..++ ++..++ .+..|++
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 246789999 99999999999999999865 3334445444444433345778776665 444444 4555554
Q ss_pred cccCcc-------c-eeEeecCCCccCCC----CCCCeEEEeecCCC
Q 021484 262 QRRQTL-------A-YRERRYNAADFESD----EEEGETYLLGFSDS 296 (312)
Q Consensus 262 ~~~~~~-------~-~~~~~~~~~~~~~~----~~~~~v~~~~~~~~ 296 (312)
...... . ...++|++..+... .....+++++...+
T Consensus 390 ~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 390 KGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp TCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 433211 1 12566666655432 22356888887654
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=1e-18 Score=160.14 Aligned_cols=195 Identities=11% Similarity=0.068 Sum_probs=140.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCc---cEEEEEEccCCCeEEEec-
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI---HITGLAYSNTSELLISYN- 107 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~s~~- 107 (312)
.+.+++|+|++ +++++ +.||+|++||+.+++.. .++..|.. .+.+++|+|+|++|+++.
T Consensus 18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~---------------~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTST---------------VLIEGKKIESLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCE---------------EEECTTTTTTTTCSEEEECTTSSEEEEEES
T ss_pred cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEE---------------EEeccccccccccceEEECCCCCEEEEEec
Confidence 46789999999 56665 78999999999988621 11133333 488999999999888863
Q ss_pred C---------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe---cccCCceeeEEEEecCCCCEEEEeccCceEEEE
Q 021484 108 D---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 175 (312)
Q Consensus 108 d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iw 175 (312)
+ +.+++||+.++ +. +.+. ++... +..++| +|+|++|+.++. +.|++|
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~~----------------~~-~~l~~~~~~~~~--~~~~~~-SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPHG----------------DP-QSLDPPEVSNAK--LQYAGW-GPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSSC----------------CC-EECCCTTCCSCC--CSBCCB-CSSTTCEEEEET-TEEEEE
T ss_pred CccceeecceeeEEEEECCCC----------------ce-EeccCCcccccc--ccccEE-CCCCCEEEEEEC-CeEEEE
Confidence 3 78899999886 33 2232 22222 788999 999999998876 799999
Q ss_pred eccCCeeEEEeecCccce------------------EEEEEcCCCCeEEEEeCCC-------------------------
Q 021484 176 KKKGGKLVRLMVGDRHVV------------------NQLEPHPHIPMFATCGIEK------------------------- 212 (312)
Q Consensus 176 d~~~~~~~~~~~~~~~~v------------------~~~~~~p~~~~l~t~~~d~------------------------- 212 (312)
|+.+++.......+...+ ..++|+|+|+.|++++.|+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999888766655444333 7899999999999887543
Q ss_pred ---------cEEEccCCCCCC-CCCCCCh-----hhhhhhhccCCCCceeEEec----CCceEEEEEeccc
Q 021484 213 ---------TVKLWAPMPTDF-PPLPDNA-----EKIMKANKQGREDHSRITLT----PDVIMHVLRLQRR 264 (312)
Q Consensus 213 ---------~i~iwd~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~l~s~~----~d~~i~i~~~~~~ 264 (312)
.|++||+.+++. ..+..+. ...+....+++++.++++.. .+..+++||+.+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 799999988763 4443321 22234456888888886654 2367899997654
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=9.3e-18 Score=140.32 Aligned_cols=233 Identities=9% Similarity=0.016 Sum_probs=157.7
Q ss_pred ccceEEEEEcCCCCcEEEEEeC-------CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCe
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGS-------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 102 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 102 (312)
...+..++|+|++ +.+++++. ++.|.+||..+++.... + . ....+..++|+|+|+.
T Consensus 40 ~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--------------~-~-~~~~~~~~~~s~dg~~ 102 (353)
T 3vgz_A 40 GKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQA--------------I-H-NDLKPFGATINNTTQT 102 (353)
T ss_dssp ESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEE--------------E-E-ESSCCCSEEEETTTTE
T ss_pred ccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE--------------E-e-cCCCcceEEECCCCCE
Confidence 4468899999998 55665553 67899999998863211 1 1 1234668899999985
Q ss_pred E-EEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC-------ceeeEEEEecCCCCEEEEec--cCce
Q 021484 103 L-ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDEYVMSGS--DCGH 171 (312)
Q Consensus 103 l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~v~~~s~~~~~l~~~~--~dg~ 171 (312)
+ ++. .++.|.+||..++ +....+..+... ..+.+++| +|+++++++++ .++.
T Consensus 103 l~v~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 103 LWFGNTVNSAVTAIDAKTG----------------EVKGRLVLDDRKRTEEVRPLQPRELVA-DDATNTVYISGIGKESV 165 (353)
T ss_dssp EEEEETTTTEEEEEETTTC----------------CEEEEEESCCCCCCSSCCCCEEEEEEE-ETTTTEEEEEEESSSCE
T ss_pred EEEEecCCCEEEEEeCCCC----------------eeEEEEecCCCccccccCCCCCceEEE-CCCCCEEEEEecCCCce
Confidence 4 444 4899999999887 555555543211 12678998 89999877765 4889
Q ss_pred EEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCC-CCCC--C-hhhhhhhhccCCCCcee
Q 021484 172 LFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PLPD--N-AEKIMKANKQGREDHSR 247 (312)
Q Consensus 172 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~--~-~~~~~~~~~~~~~~~~l 247 (312)
|.+||..+++.+..+..+...+..++|+|+++.+++++.++.|.+||+.+++.. .+.. . .........+++++..+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 999999999998888756666889999999999999999999999999887632 1111 0 11112223466776655
Q ss_pred E-EecCCceEEEEEecccCcccee--------EeecCCCcc-CCCCCCCeEEEeecCCC
Q 021484 248 I-TLTPDVIMHVLRLQRRQTLAYR--------ERRYNAADF-ESDEEEGETYLLGFSDS 296 (312)
Q Consensus 248 ~-s~~~d~~i~i~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~v~~~~~~~~ 296 (312)
+ +...++.+.+||+......... .+.+++..+ .+...++.+.++|...+
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 4 4455699999998665432221 334444422 22334566777776554
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=4.2e-17 Score=135.28 Aligned_cols=225 Identities=6% Similarity=0.013 Sum_probs=148.9
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE-ec-CCcEEE
Q 021484 36 IVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-DELVYL 113 (312)
Q Consensus 36 ~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~-d~~i~i 113 (312)
..|.++...++++.+.++.|++||+.++++. ..+ ..+...+ .++|+|+|+++++ +. ++.|++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~--------------~~~-~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~ 66 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEIL--------------NQI-TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQ 66 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEE--------------EEE-ECCCCEE-EEEECSSSCEEEEEESTTCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccccee--------------eeE-EccCCcc-eEEEcCCCCEEEEEeCCCCeEEE
Confidence 3456666577888899999999999988732 111 2234455 9999999985554 44 889999
Q ss_pred EEcCCCcCCCCCcCCcccccCCCC-CceEecccCCceeeEEEEecCCCCEEEEeccCc---eEEEEeccCCeeEEEeecC
Q 021484 114 FEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG---HLFIWKKKGGKLVRLMVGD 189 (312)
Q Consensus 114 wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~ 189 (312)
||+.++ +. ...+..+... ..+++| +|++++|+++..++ .|.+||+.+++.+..+..+
T Consensus 67 ~d~~~~----------------~~~~~~~~~~~~~--~~~~~~-s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 127 (331)
T 3u4y_A 67 IETQLE----------------PPKVVAIQEGQSS--MADVDI-TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP 127 (331)
T ss_dssp EECSSS----------------SCEEEEEEECSSC--CCCEEE-CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCC----------------ceeEEecccCCCC--ccceEE-CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC
Confidence 999887 45 5555555433 444898 99999999666553 8999999999988887654
Q ss_pred ccceEEEEEcCCCCeEEEE-eCCCc-EEEccCCCCCCC-----CCCCChhhhhhhhccCCCCc-eeEEecCCceEEEEEe
Q 021484 190 RHVVNQLEPHPHIPMFATC-GIEKT-VKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRL 261 (312)
Q Consensus 190 ~~~v~~~~~~p~~~~l~t~-~~d~~-i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~i~~~ 261 (312)
..+..++|+|+|++++++ ..++. |.+|++...... ........ .....++++++ ++++...++.+++|++
T Consensus 128 -~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 128 -YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTR-PFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp -TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSS-EEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred -CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCC-ccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 456899999999865544 56688 999998753211 00011111 23344677777 4566667899999998
Q ss_pred cccCc---cce---------eEeecCCCccC-CCCCCCeEEEeecCCCC
Q 021484 262 QRRQT---LAY---------RERRYNAADFE-SDEEEGETYLLGFSDSD 297 (312)
Q Consensus 262 ~~~~~---~~~---------~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 297 (312)
..... ... ..+.|++..+. ....++.++++|...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 206 QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 76544 211 13445555332 23345557777766554
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=5e-17 Score=135.86 Aligned_cols=206 Identities=7% Similarity=0.053 Sum_probs=131.8
Q ss_pred ccceEEEEEcCCCCcEEEEEeC--CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
...+..++|+|++ ++++++.. ++.|++|++.+++.. .......+...+..++|+|+|++|+++
T Consensus 39 ~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~-------------~~~~~~~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 39 TQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAH-------------KLNTVVAPGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEE-------------EEEEEEEESCCCSEEEEETTTTEEEEEE
T ss_pred cCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEE-------------EeeeeecCCCCCEEEEECCCCCEEEEEe
Confidence 3456789999998 64444432 689999999776521 111112345667889999999976664
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc-------CCceeeEEEEecCCCCEEEEeccCceEEEEecc
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-------NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 178 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~ 178 (312)
.++.|.+|++..... ...+..+.... ....+.+++| +|+++++++...++.|.+|++.
T Consensus 105 ~~~~~v~v~~~~~~g~-------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~-spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 105 YHKGTAEVMKIAADGA-------------LTLTDTVQHSGHGPRPEQDGSHIHYTDL-TPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp TTTTEEEEEEECTTSC-------------EEEEEEEECCCCCSSTTCSSCCEEEEEE-CTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCC-------------eeecceeecCCCCCCccccCCCceEEEE-CCCCcEEEEeCCCCEEEEEEEC
Confidence 488999999963200 01111121110 0123778999 9999977777778999999998
Q ss_pred -CCeeE--EEeecC-ccceEEEEEcCCCCeEEE-EeCCCcEEEccCCC--CCCC---CCCCChh-----hhhhhhccCCC
Q 021484 179 -GGKLV--RLMVGD-RHVVNQLEPHPHIPMFAT-CGIEKTVKLWAPMP--TDFP---PLPDNAE-----KIMKANKQGRE 243 (312)
Q Consensus 179 -~~~~~--~~~~~~-~~~v~~~~~~p~~~~l~t-~~~d~~i~iwd~~~--~~~~---~~~~~~~-----~~~~~~~~~~~ 243 (312)
+++.. ..+..+ ...+..++|+|+|+++++ ...++.|++|++.. +++. .+..... .......++++
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 55433 222222 236788999999997555 55788999999874 3211 1110110 11223457788
Q ss_pred Ccee-EEecCCceEEEEEecc
Q 021484 244 DHSR-ITLTPDVIMHVLRLQR 263 (312)
Q Consensus 244 ~~~l-~s~~~d~~i~i~~~~~ 263 (312)
++++ ++...++.+.+|++..
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECG
T ss_pred CCEEEEEeCCCCEEEEEEECC
Confidence 8866 6667789999999863
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=159.39 Aligned_cols=230 Identities=11% Similarity=0.105 Sum_probs=144.4
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeC---------CCeEEEEEccCCeecCCCCC
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS---------DEYARVYDIRKCHWYSPISS 71 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~ 71 (312)
|++||+.+.+...++...... ...+.+++|||+| +.|+.++. ++.|++||+.+++....
T Consensus 38 i~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~--- 105 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTMK--------SVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG--- 105 (719)
T ss_dssp EEEEESSSCCEEEEECHHHHH--------TTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS---
T ss_pred EEEEEcCCCcEEEEEcccccc--------ccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCccccc---
Confidence 578998887755544322110 0138899999999 78887765 78999999998874110
Q ss_pred CCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC----
Q 021484 72 DTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS---- 147 (312)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 147 (312)
..+ ...+..++|+|+|+.|+.+.++.|++|++.++... .+. ........+.++...
T Consensus 106 ---------~~l----~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~---~l~----~~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 106 ---------NEL----PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF---QIT----FNGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp ---------SCC----CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE---ECC----CCCBTTTEEESSCCHHHHH
T ss_pred ---------eec----CcccccceECCCCCEEEEEECCeEEEEeCCCCCcE---EEe----cCCCcCCeEcccccceeee
Confidence 111 23577899999999999988999999999876100 000 000011112222111
Q ss_pred ---ceeeEEEEecCCCCEEEEeccCc----------------------------------eEEEEeccCCeeE--EE---
Q 021484 148 ---QTVKGVNFFGPNDEYVMSGSDCG----------------------------------HLFIWKKKGGKLV--RL--- 185 (312)
Q Consensus 148 ---~~v~~v~~~s~~~~~l~~~~~dg----------------------------------~v~iwd~~~~~~~--~~--- 185 (312)
....+++| +|+|++|++++.|. .|++||+.+++.. ..
T Consensus 166 e~~~~~~~~~w-SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 244 (719)
T 1z68_A 166 EMLATKYALWW-SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV 244 (719)
T ss_dssp HTTCSSCCEEE-CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC
T ss_pred ecccCcccEEE-CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC
Confidence 00258999 99999999887652 7889999887642 12
Q ss_pred ---eecCccceEEEEEcCCCCeEEEEeCC----CcEEEcc----CCCCCCCCCC-----CChhhhh----hhhccCCCCc
Q 021484 186 ---MVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWA----PMPTDFPPLP-----DNAEKIM----KANKQGREDH 245 (312)
Q Consensus 186 ---~~~~~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd----~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~ 245 (312)
+.+|...+..++|+|+++++++.... ..|.+|| +.+++...+. .+...+. ....+++++.
T Consensus 245 ~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 245 PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC
Confidence 23577789999999998777664422 2488899 7776654333 2333232 1345777777
Q ss_pred eeE--EecCCce--EEEEEecc
Q 021484 246 SRI--TLTPDVI--MHVLRLQR 263 (312)
Q Consensus 246 ~l~--s~~~d~~--i~i~~~~~ 263 (312)
.++ +...++. |.+|++..
T Consensus 325 ~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 325 SYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp CEEEEEECTTSCEEEEEESSCS
T ss_pred eEEEEEEccCCceEEEEEECCC
Confidence 544 3445554 44555443
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=2.6e-17 Score=136.95 Aligned_cols=198 Identities=11% Similarity=0.095 Sum_probs=129.1
Q ss_pred ceEEEEEcCCCCcEEE-EEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE-e-cC
Q 021484 32 RLNAIVIDPRNPNYFA-VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-ND 108 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~-~d 108 (312)
.+..++|+|++ +.++ ++..++.|.+||+..+... ....... ....+.+++|+|+++++++ + .+
T Consensus 85 ~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~------------~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 85 SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPV------------GVVDVVE-GLDGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEE------------EEEEEEC-CCTTBCCCEECTTSSEEEEEEGGG
T ss_pred CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccc------------ccccccc-CCCCceEEEECCCCCEEEEecCCC
Confidence 67899999999 5554 4456899999999532210 0111112 2335788999999986655 4 59
Q ss_pred CcEEEEEcCC-CcCCCCCcCCcccccCCCCCc----eEecccCCceeeEEEEecCCCCEEEE-eccCceEEEEeccC--C
Q 021484 109 ELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQ----VYSGHRNSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKG--G 180 (312)
Q Consensus 109 ~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~v~~~s~~~~~l~~-~~~dg~v~iwd~~~--~ 180 (312)
+.|++||+.+ + +... .+..+.. ..+..++| +|+++++++ +..++.|.+|++.. +
T Consensus 151 ~~v~~~d~~~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~-~pdg~~l~~~~~~~~~i~~~~~~~~~g 212 (343)
T 1ri6_A 151 DRICLFTVSDDG----------------HLVAQDPAEVTTVEG-AGPRHMVF-HPNEQYAYCVNELNSSVDVWELKDPHG 212 (343)
T ss_dssp TEEEEEEECTTS----------------CEEEEEEEEEECSTT-CCEEEEEE-CTTSSEEEEEETTTTEEEEEESSCTTS
T ss_pred CEEEEEEecCCC----------------ceeeecccccccCCC-CCcceEEE-CCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 9999999976 3 2221 2222222 23788999 999997754 45899999999953 4
Q ss_pred ee--EEEee---cC---ccceEEEEEcCCCCeEE-EEeCCCcEEEccCC--CCCC---CCCCCChhhhhhhhccCCCCce
Q 021484 181 KL--VRLMV---GD---RHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPM--PTDF---PPLPDNAEKIMKANKQGREDHS 246 (312)
Q Consensus 181 ~~--~~~~~---~~---~~~v~~~~~~p~~~~l~-t~~~d~~i~iwd~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
+. ...+. .. ...+..++|+|++++|+ ++..++.|++|++. ++.. ..+..+.. .....+++++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~ 290 (343)
T 1ri6_A 213 NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ--PRGFNVDHSGKY 290 (343)
T ss_dssp CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS--CCCEEECTTSSE
T ss_pred cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc--cceEEECCCCCE
Confidence 32 22222 11 23567899999999876 44579999999998 3322 11211222 334457778887
Q ss_pred eEEec-CCceEEEEEecc
Q 021484 247 RITLT-PDVIMHVLRLQR 263 (312)
Q Consensus 247 l~s~~-~d~~i~i~~~~~ 263 (312)
++.++ .++.+.+|++..
T Consensus 291 l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 291 LIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEECTTTCEEEEEEEET
T ss_pred EEEecCCCCeEEEEEEcC
Confidence 77666 689999997764
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=4.6e-18 Score=161.72 Aligned_cols=193 Identities=8% Similarity=-0.000 Sum_probs=150.5
Q ss_pred CccceEEEEEc-CCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCc-cEEEEEEccCCCeEEEe
Q 021484 29 NSIRLNAIVID-PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~-p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~s~ 106 (312)
|...+.+++|+ |++ +.|++++ ++.|.+|++.+++.. .+ ..|.. .+..++|+ +|+.|+.+
T Consensus 294 ~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~~---------------~~-~~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYVL---------------KV-PEPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp ECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBEE---------------EC-SCCSCEEEEEECSS-SEEEEEEE
T ss_pred cccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCceE---------------Ec-cCCCcceEEeeeEc-CCCeEEEE
Confidence 44578999999 999 7777776 789999999876521 11 44555 78999999 99877775
Q ss_pred -cCCcEE-EEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE
Q 021484 107 -NDELVY-LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 184 (312)
Q Consensus 107 -~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 184 (312)
.+..+. +|++.++ + ...+.++... +..++| +|+|++|++++.++.|++||+.+++...
T Consensus 355 s~~~~l~~~~d~~~~----------------~-~~~l~~~~~~--~~~~~~-SpDG~~la~~~~~~~v~~~d~~tg~~~~ 414 (1045)
T 1k32_A 355 TREGDFLGIYDYRTG----------------K-AEKFEENLGN--VFAMGV-DRNGKFAVVANDRFEIMTVDLETGKPTV 414 (1045)
T ss_dssp ETTEEEEEEEETTTC----------------C-EEECCCCCCS--EEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ECCCceEEEEECCCC----------------C-ceEecCCccc--eeeeEE-CCCCCEEEEECCCCeEEEEECCCCceEE
Confidence 467788 8898765 2 2334455544 899999 9999999999999999999999999887
Q ss_pred EeecCccceEEEEEcCCCCeEEEEeCCC----------cEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCc
Q 021484 185 LMVGDRHVVNQLEPHPHIPMFATCGIEK----------TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV 254 (312)
Q Consensus 185 ~~~~~~~~v~~~~~~p~~~~l~t~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 254 (312)
.+..|...+..++|+|+|++|++++.++ .|++||+.+++...+..+...... ..+++++..++..+.++
T Consensus 415 ~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~-~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 415 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA-PAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEE-EEECTTSCEEEEEESCC
T ss_pred eccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCC-ceEcCCCCEEEEEeccc
Confidence 7778988999999999999998887644 899999998776555555444433 34788888888888777
Q ss_pred eEEEEEe
Q 021484 255 IMHVLRL 261 (312)
Q Consensus 255 ~i~i~~~ 261 (312)
..++|+.
T Consensus 494 ~~~~~~~ 500 (1045)
T 1k32_A 494 LDPSPDR 500 (1045)
T ss_dssp CCCEECS
T ss_pred CCcCcch
Confidence 6666653
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=3.5e-17 Score=146.38 Aligned_cols=189 Identities=10% Similarity=0.006 Sum_probs=137.1
Q ss_pred cceEEEEEcCCCCcEEEEEeC---CCeEEEEEccC--CeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC--eE
Q 021484 31 IRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRK--CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE--LL 103 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l 103 (312)
..+..++|+|+ +++++++. +...++|.+.. .. ....+ .. ...+...+|+|+|+ .+
T Consensus 65 ~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g--------------~~~~l-~~-~~~~~~~~~s~dg~~~~~ 126 (582)
T 3o4h_A 65 NSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPG--------------EEQRL-EA-VKPMRILSGVDTGEAVVF 126 (582)
T ss_dssp SEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTT--------------CCEEC-TT-SCSBEEEEEEECSSCEEE
T ss_pred cccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCC--------------ccccc-cC-CCCceeeeeCCCCCeEEE
Confidence 57899999997 57777664 55667766654 21 00111 11 12234668888886 44
Q ss_pred EEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC----ceEEEEeccC
Q 021484 104 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWKKKG 179 (312)
Q Consensus 104 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d----g~v~iwd~~~ 179 (312)
+++.++.+.+||+.++ +.. .+..+. ..+++| +|+|++|++++.+ +.|++||+.+
T Consensus 127 ~s~~~~~~~l~d~~~g----------------~~~-~l~~~~----~~~~~~-spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 127 TGATEDRVALYALDGG----------------GLR-ELARLP----GFGFVS-DIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEECSSCEEEEEEETT----------------EEE-EEEEES----SCEEEE-EEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred EecCCCCceEEEccCC----------------cEE-EeecCC----CceEEE-CCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 5556666779999876 333 333332 167888 9999999988877 7899999998
Q ss_pred CeeEEEeecCccceEEEEEcCCCCeEEEEeCCC--cEEEccCCCCCCCCCCCChhhhhhhhc--------cCCCCceeEE
Q 021484 180 GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TVKLWAPMPTDFPPLPDNAEKIMKANK--------QGREDHSRIT 249 (312)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~s 249 (312)
++.. .+..|...+..++|+|+|+.|+++..++ .|++||+.+++...+..+...+. ... +++++.++++
T Consensus 185 g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 185 GGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFS-SYRPTAITWLGYLPDGRLAVV 262 (582)
T ss_dssp CCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHH-HHCCSEEEEEEECTTSCEEEE
T ss_pred CCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChh-hhhhccccceeEcCCCcEEEE
Confidence 8764 6677888899999999999999888888 89999999887654444444443 334 7888888899
Q ss_pred ecCCceEEEEEe
Q 021484 250 LTPDVIMHVLRL 261 (312)
Q Consensus 250 ~~~d~~i~i~~~ 261 (312)
.+.++.+++|++
T Consensus 263 ~~~~g~~~l~~~ 274 (582)
T 3o4h_A 263 ARREGRSAVFID 274 (582)
T ss_dssp EEETTEEEEEET
T ss_pred EEcCCcEEEEEE
Confidence 999999999998
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=3.8e-16 Score=130.48 Aligned_cols=227 Identities=10% Similarity=0.100 Sum_probs=139.7
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEe-CCCeEEEEEccC-CeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRK-CHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~~ 78 (312)
|++||+.+.....+.... .|...+..++|+|++ ++|++++ .++.|.+|++.. +... .+..+
T Consensus 65 v~~~~~~~g~~~~~~~~~---------~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~-------~~~~~ 127 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVV---------APGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALT-------LTDTV 127 (347)
T ss_dssp EEEEEEETTEEEEEEEEE---------EESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEE-------EEEEE
T ss_pred EEEEEecCCcEEEeeeee---------cCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCee-------eccee
Confidence 467887554432222211 134567899999999 6666665 789999999963 2211 00000
Q ss_pred cccc---cccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcC-CCcCCCCCcCCcccccCCCCC--ceEecccCCceee
Q 021484 79 CPRH---LIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKN-MGLGPSPLSLSPEDLQKREEP--QVYSGHRNSQTVK 151 (312)
Q Consensus 79 ~~~~---~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~ 151 (312)
.... ....+...+.+++|+|+|+++++. .++.|++|++. ++ +.. ..+..... ..+.
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g----------------~~~~~~~~~~~~g-~~p~ 190 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG----------------QLSEQSVLTMEAG-FGPR 190 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS----------------CEEEEEEEECCTT-CCEE
T ss_pred ecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC----------------cEEEeeeEEcCCC-CCCc
Confidence 0000 001123458899999999966665 48899999997 33 221 11222222 2367
Q ss_pred EEEEecCCCCEEEE-eccCceEEEEeccC--Cee--EEEeecCc------cceEEEEEcCCCCeE-EEEeCCCcEEEccC
Q 021484 152 GVNFFGPNDEYVMS-GSDCGHLFIWKKKG--GKL--VRLMVGDR------HVVNQLEPHPHIPMF-ATCGIEKTVKLWAP 219 (312)
Q Consensus 152 ~v~~~s~~~~~l~~-~~~dg~v~iwd~~~--~~~--~~~~~~~~------~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~ 219 (312)
.++| +|+|++|++ +..++.|.+|++.. ++. +..+.... ..+..++|+|+|++| ++...++.|.+|++
T Consensus 191 ~~~~-spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 191 HLVF-SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEE-CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred eEEE-CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 8999 999996655 56789999999874 543 22333222 348889999999986 55667899999998
Q ss_pred CCC-CC---CCCCCChhhhhhhhccCCCCceeEEec-CCceEEEEEecc
Q 021484 220 MPT-DF---PPLPDNAEKIMKANKQGREDHSRITLT-PDVIMHVLRLQR 263 (312)
Q Consensus 220 ~~~-~~---~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~i~~~~~ 263 (312)
... .. ..+..+...+ ....+++++++++.+. .++.+.+|++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~-~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFP-RDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp CGGGCEEEEEEEECSSSCC-CEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCcEEEeEEEecCCCCc-CeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 632 21 1122212222 3344778888776655 458999997753
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=2.1e-16 Score=150.36 Aligned_cols=154 Identities=8% Similarity=0.046 Sum_probs=125.6
Q ss_pred Ccc-ceEEEEEcCCCCcEEEEEeCCCeEE-EEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 29 NSI-RLNAIVIDPRNPNYFAVGGSDEYAR-VYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~-~v~~~~~~p~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
|.. .+..++|+ ++ +.|+.++.++.+. +|++.+++. ..+ ..|...+..++|+|+|++|+++
T Consensus 335 ~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~---------------~~l-~~~~~~~~~~~~SpDG~~la~~ 396 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKA---------------EKF-EENLGNVFAMGVDRNGKFAVVA 396 (1045)
T ss_dssp CSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCE---------------EEC-CCCCCSEEEEEECTTSSEEEEE
T ss_pred CCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCc---------------eEe-cCCccceeeeEECCCCCEEEEE
Confidence 455 79999999 88 7888888888888 889886642 222 3567789999999999988886
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCc----------eEEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG----------HLFIW 175 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg----------~v~iw 175 (312)
.++.|++||+.++ +....+.+|... +.+++| +|+|++|++++.++ .|++|
T Consensus 397 ~~~~~v~~~d~~tg----------------~~~~~~~~~~~~--v~~~~~-SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 397 NDRFEIMTVDLETG----------------KPTVIERSREAM--ITDFTI-SDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp ETTSEEEEEETTTC----------------CEEEEEECSSSC--CCCEEE-CTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred CCCCeEEEEECCCC----------------ceEEeccCCCCC--ccceEE-CCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 5899999999887 555556577655 899999 99999998887654 89999
Q ss_pred eccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCC
Q 021484 176 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 220 (312)
Q Consensus 176 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~ 220 (312)
|+.+++ +..+..|...+..++|+|+|+.|++++.++..++|+..
T Consensus 458 d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 458 DMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp ETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred ECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 999887 66777788888999999999999999988777777643
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=7.9e-17 Score=134.37 Aligned_cols=153 Identities=9% Similarity=0.059 Sum_probs=109.5
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeE-EEe-cCCcEE
Q 021484 35 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVY 112 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~-~d~~i~ 112 (312)
.+++++++ .++++++.++.|++||+.+++... .+.......+..++|+|+++.+ ++. .++.|+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYK--------------SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIY 68 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEE--------------EEECSSCCSSCEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEEE--------------EEecCCCCCCceeEECCCCCEEEEEeCCCCcEE
Confidence 45677777 899999999999999999887321 1111111246789999999855 444 489999
Q ss_pred EEEcCCCcCCCCCcCCcccccCCCCCceEecccC----CceeeEEEEecCCCCEEEEeccC------------ceEEEEe
Q 021484 113 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVNFFGPNDEYVMSGSDC------------GHLFIWK 176 (312)
Q Consensus 113 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~~~s~~~~~l~~~~~d------------g~v~iwd 176 (312)
+||+.++ +....+..... ...+..++| +|++++|++++.+ +.|.+||
T Consensus 69 ~~d~~t~----------------~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d 131 (349)
T 1jmx_B 69 GIDLDTC----------------KNTFHANLSSVPGEVGRSMYSFAI-SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS 131 (349)
T ss_dssp EEETTTT----------------EEEEEEESCCSTTEEEECSSCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred EEeCCCC----------------cEEEEEEcccccccccccccceEE-CCCCCEEEEEcccccccccccccCCCeEEEEE
Confidence 9999876 44444442211 122678998 9999999998866 8999999
Q ss_pred ccCCee---EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 177 KKGGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 177 ~~~~~~---~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+.+++. +..+. +...+.+++|+|+++ +++++ +.|.+||+.+++
T Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 132 TADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp GGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCC
T ss_pred CCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCc
Confidence 987443 33444 334688899999999 55554 449999998765
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=2.1e-16 Score=145.11 Aligned_cols=233 Identities=9% Similarity=0.077 Sum_probs=145.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCC---------CeEEEEEccCCeecCCCCC
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSPISS 71 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~ 71 (312)
|++||+.++++..++....... +......++|||++ +.|+.++.+ +.+.+||+.++++..
T Consensus 38 i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---- 106 (740)
T 4a5s_A 38 ILVFNAEYGNSSVFLENSTFDE------FGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---- 106 (740)
T ss_dssp EEEEETTTCCEEEEECTTTTTT------CCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----
T ss_pred EEEEECCCCceEEEEechhhhh------hcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCcEEE----
Confidence 5789999887665554433220 22234568999999 788887765 567799999987321
Q ss_pred CCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC----
Q 021484 72 DTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS---- 147 (312)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 147 (312)
+..|...+...+|||+|+.||...++.|++|++.++.. .++.. .......+.++...
T Consensus 107 ------------l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~---~~lt~----~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 107 ------------EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS---YRITW----TGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp ------------SSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC---EECCS----CCBTTTEEESBCCHHHHH
T ss_pred ------------cccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce---EEEcC----CCCccceecCcccccccc
Confidence 14456789999999999999998899999999987610 00000 00111122222110
Q ss_pred ---ceeeEEEEecCCCCEEEEeccC------------------------------------ceEEEEeccC---Ce--eE
Q 021484 148 ---QTVKGVNFFGPNDEYVMSGSDC------------------------------------GHLFIWKKKG---GK--LV 183 (312)
Q Consensus 148 ---~~v~~v~~~s~~~~~l~~~~~d------------------------------------g~v~iwd~~~---~~--~~ 183 (312)
.....+.| +|+|++|+.++.| ..|++||+.+ ++ ..
T Consensus 168 e~~~~~~~~~w-SpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 168 EVFSAYSALWW-SPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HTSSSSBCEEE-CTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred hhcCCCcceEE-CCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 01235888 9999999887432 1588899988 73 22
Q ss_pred EEee------cCccceEEEEEcCCCCeEEEEe----CCCcEEEccCCCCC-------CCCC--CCChhhhh----hhhcc
Q 021484 184 RLMV------GDRHVVNQLEPHPHIPMFATCG----IEKTVKLWAPMPTD-------FPPL--PDNAEKIM----KANKQ 240 (312)
Q Consensus 184 ~~~~------~~~~~v~~~~~~p~~~~l~t~~----~d~~i~iwd~~~~~-------~~~~--~~~~~~~~----~~~~~ 240 (312)
..+. +|...+..++|+|+|+.++... .+..|++||+.+++ ...+ ..+...+- ....+
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 3343 2777899999999999765543 23479999998876 2222 12222221 12346
Q ss_pred CCCCceeE-Eec-CC--ceEEEEEeccc
Q 021484 241 GREDHSRI-TLT-PD--VIMHVLRLQRR 264 (312)
Q Consensus 241 ~~~~~~l~-s~~-~d--~~i~i~~~~~~ 264 (312)
++++..++ ..+ .+ ..|++|++...
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 78887665 444 34 45666665543
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=4e-16 Score=129.36 Aligned_cols=146 Identities=8% Similarity=0.016 Sum_probs=109.3
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCc-cEEEEEEccCCCeE-EEe-cCCcEEEEEcCCCc
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELL-ISY-NDELVYLFEKNMGL 120 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~ 120 (312)
.++++++.++.|++||+.+++.. ..+...+.. .+..++|+|+++.+ +++ .++.|.+||+.++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~- 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD--------------KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG- 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE--------------EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-
T ss_pred cEEEEcCCCCeEEEEECCCCcEE--------------EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-
Confidence 57899999999999999988732 111112211 36789999999755 445 4889999999876
Q ss_pred CCCCCcCCcccccCCCCCceEeccc-C--CceeeEEEEecCCCCEEEEec------------cCceEEEEeccCCeeEEE
Q 021484 121 GPSPLSLSPEDLQKREEPQVYSGHR-N--SQTVKGVNFFGPNDEYVMSGS------------DCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~v~~v~~~s~~~~~l~~~~------------~dg~v~iwd~~~~~~~~~ 185 (312)
+....+.... . ...+..++| +|++++|+++. .++.|.+||+.+++.+..
T Consensus 67 ---------------~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 67 ---------------ETLGRIDLSTPEERVKSLFGAAL-SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp ---------------CEEEEEECCBTTEEEECTTCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred ---------------CeEeeEEcCCcccccccccceEE-CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 4554444221 0 012678999 99999998886 579999999999988877
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+.. ...+..++|+|++++++++ ++.|++||+.+++
T Consensus 131 ~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 131 FEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp EEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE
T ss_pred EeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 764 3467889999999988877 6899999988664
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.71 E-value=1.4e-16 Score=142.53 Aligned_cols=194 Identities=10% Similarity=0.016 Sum_probs=134.3
Q ss_pred ccceEEEEEcCCCCcEEEEEeC-CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 107 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~- 107 (312)
..+|++++|+|+| +.||.++. ||+++||++.+++. ..+...+...+..++|+|+ ++++++.
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~---------------~~lt~~~~~~~~~~~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGET---------------VKLNREPINSVLDPHYGVG-RVILVRDV 83 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEE---------------EECCSSCCSEECEECTTCS-EEEEEEEC
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCc---------------EeeecccccccccccCCCC-eEEEEecc
Confidence 4579999999999 78887766 99999999876652 2221333357899999999 7666543
Q ss_pred ---CCcEEEEEcCC--CcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCC--EEEEeccCceEEEEeccCC
Q 021484 108 ---DELVYLFEKNM--GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE--YVMSGSDCGHLFIWKKKGG 180 (312)
Q Consensus 108 ---d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~--~l~~~~~dg~v~iwd~~~~ 180 (312)
+....+|.+.. .. .. ..+.... . +...+| +|+++ .++++..+ .+.+||+.++
T Consensus 84 ~~g~~~~~l~~~~~~~~g---------------~~-~~l~~~~-~--~~~~~~-s~dg~~~~~~s~~~~-~~~l~d~~~g 142 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPG---------------EE-QRLEAVK-P--MRILSG-VDTGEAVVFTGATED-RVALYALDGG 142 (582)
T ss_dssp STTSCCEEEEEEETTSTT---------------CC-EECTTSC-S--BEEEEE-EECSSCEEEEEECSS-CEEEEEEETT
T ss_pred CCCCcceEEEEEeccCCC---------------cc-ccccCCC-C--ceeeee-CCCCCeEEEEecCCC-CceEEEccCC
Confidence 35556665543 20 11 1222222 1 334566 66665 34444444 4559999998
Q ss_pred eeEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCc--
Q 021484 181 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV-- 254 (312)
Q Consensus 181 ~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-- 254 (312)
+.......+. .+++|+|+|+.+++++.+ +.|++||+.+++...+..+...+ ....++++++.+++...++
T Consensus 143 ~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpDG~~l~~~~~~~~~ 218 (582)
T 3o4h_A 143 GLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPGMKVTAGLETAREA 218 (582)
T ss_dssp EEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEE-EEEEECTTSCEEEEEECSSCE
T ss_pred cEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCcc-ccceECCCCCEEEEccCCCee
Confidence 8765554333 789999999999988877 78999999998877666665544 4455889999999877888
Q ss_pred eEEEEEecccC
Q 021484 255 IMHVLRLQRRQ 265 (312)
Q Consensus 255 ~i~i~~~~~~~ 265 (312)
.|++||+....
T Consensus 219 ~i~~~d~~~~~ 229 (582)
T 3o4h_A 219 RLVTVDPRDGS 229 (582)
T ss_dssp EEEEECTTTCC
T ss_pred EEEEEcCCCCc
Confidence 88999876653
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=3.5e-14 Score=119.18 Aligned_cols=201 Identities=6% Similarity=-0.011 Sum_probs=126.9
Q ss_pred cceEEEEEcCCCCcEEEEEeCC----CeEEEEEccC--CeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSD----EYARVYDIRK--CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 104 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~d----g~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 104 (312)
..+..++|+|++ ++|++++.+ +.|.+|++.. +++. .......+......+++ ++++|+
T Consensus 50 ~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~-------------~~~~~~~~~~~p~~~~~--dg~~l~ 113 (361)
T 3scy_A 50 ANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLH-------------LLNTQKTMGADPCYLTT--NGKNIV 113 (361)
T ss_dssp SCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEE-------------EEEEEECSSSCEEEEEE--CSSEEE
T ss_pred CCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEE-------------EeeEeccCCCCcEEEEE--CCCEEE
Confidence 356779999999 777777765 8999999875 3321 11111223456677777 777665
Q ss_pred Ee--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC---------CceeeEEEEecCCCCEEEEe-ccCceE
Q 021484 105 SY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---------SQTVKGVNFFGPNDEYVMSG-SDCGHL 172 (312)
Q Consensus 105 s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~v~~~s~~~~~l~~~-~~dg~v 172 (312)
++ .++.|.+|++...... ........+.. ...+.+++| +|++++|+++ ..++.|
T Consensus 114 ~~~~~~~~v~~~~~~~~g~~-------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 114 TANYSGGSITVFPIGQDGAL-------------LPASDVIEFKGSGPDKERQTMPHLHCVRI-TPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEETTTTEEEEEEBCTTSCB-------------CSCSEEEECCCCCSCTTTCSSCCEEEEEE-CTTSSEEEEEETTTTEE
T ss_pred EEECCCCEEEEEEeCCCCcC-------------cccceeEEccCCCCCccccCCCcceEEEE-CCCCCEEEEEeCCCCEE
Confidence 54 4899999999753100 00111111100 112578999 9999976554 458899
Q ss_pred EEEeccCCe-------eE-----EEe-ecCccceEEEEEcCCCCeEEEEe-CCCcEEEccCCCCCCC------CCCCChh
Q 021484 173 FIWKKKGGK-------LV-----RLM-VGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFP------PLPDNAE 232 (312)
Q Consensus 173 ~iwd~~~~~-------~~-----~~~-~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~------~~~~~~~ 232 (312)
.+|++.... .. ... ..+...+..++|+|+++++++++ .++.|.+|++.++.+. ....+..
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC
Confidence 999877533 11 111 22345678999999999877776 6899999998865421 1111111
Q ss_pred hhhhhhccCCCCceeEEec-C-CceEEEEEec
Q 021484 233 KIMKANKQGREDHSRITLT-P-DVIMHVLRLQ 262 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~~-~-d~~i~i~~~~ 262 (312)
.. ....+++++++++... . ++.+.+|++.
T Consensus 260 ~~-~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 260 GS-GDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CE-EEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred Cc-ccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 11 2445788888775544 4 5899999986
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=6.9e-15 Score=123.53 Aligned_cols=214 Identities=9% Similarity=0.067 Sum_probs=128.6
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc--cccccCCCccEEEEEEccCCCeEEE-e
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP--RHLIGKNNIHITGLAYSNTSELLIS-Y 106 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s-~ 106 (312)
......+++ ++..++++...++.|.+|++........... ...... ......+...+.+++|+|+|++++. .
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD---VIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE---EEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce---eEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 345667777 5633444445789999999975432211000 000000 0000122345788999999995554 4
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCC-C------ceEecccCCceeeEEEEecCCCCEEEEec-cCceEEEEec
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREE-P------QVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKK 177 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~v~~v~~~s~~~~~l~~~~-~dg~v~iwd~ 177 (312)
.++.|++|++........ .. + ........ ..+.+++| +|+++++++++ .++.|.+|++
T Consensus 174 ~~~~~v~v~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~~~-~~~~~~~~-spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADN-----------KEKFLTKGTPEAFKVAPG-SGPRHLIF-NSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TTTTEEEEEEECTTCCTTT-----------CCCCEEEEEEEEEECCTT-CCEEEEEE-CTTSSEEEEEETTTCEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCccc-----------ccceeecccccceecCCC-CCCeEEEE-cCCCCEEEEEcCCCCeEEEEEe
Confidence 388999999876410000 00 1 11111111 23788999 99999887766 6899999999
Q ss_pred cCCee--EEEee---cCccceEEEEEcCCCCeEEEEeC--CCcEEEccCC--CCCCC---CCCCChhhhhhhhccCCCCc
Q 021484 178 KGGKL--VRLMV---GDRHVVNQLEPHPHIPMFATCGI--EKTVKLWAPM--PTDFP---PLPDNAEKIMKANKQGREDH 245 (312)
Q Consensus 178 ~~~~~--~~~~~---~~~~~v~~~~~~p~~~~l~t~~~--d~~i~iwd~~--~~~~~---~~~~~~~~~~~~~~~~~~~~ 245 (312)
.+++. +..+. .+...+..++|+|+|++|++++. ++.|.+|++. ++.+. .+.. ........++++++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spdg~ 318 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPNGK 318 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTTSC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCCCC
Confidence 87754 23332 23345689999999999866665 4899999986 33321 1111 11223345778888
Q ss_pred eeEEec-CCceEEEEEecc
Q 021484 246 SRITLT-PDVIMHVLRLQR 263 (312)
Q Consensus 246 ~l~s~~-~d~~i~i~~~~~ 263 (312)
+++.+. .++.+.+|++..
T Consensus 319 ~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 319 YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEEEETTTTEEEEEEECT
T ss_pred EEEEEECCCCCEEEEEEEC
Confidence 776665 678999987753
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=2.2e-15 Score=126.86 Aligned_cols=202 Identities=11% Similarity=0.066 Sum_probs=128.6
Q ss_pred eEEEEEcCCCCc--EEEEEe-------------CCCeEEEEEccC-CeecCCCCCCCCcccccccccccCCCccEEEEEE
Q 021484 33 LNAIVIDPRNPN--YFAVGG-------------SDEYARVYDIRK-CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY 96 (312)
Q Consensus 33 v~~~~~~p~~~~--~l~~~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 96 (312)
+.+++|+|++ + +++++. .++.+.+|++.. +++... .......+...+.+++|
T Consensus 85 ~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~~ 152 (365)
T 1jof_A 85 PRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKN-----------VQNYEYQENTGIHGMVF 152 (365)
T ss_dssp GGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEE-----------EEEEECCTTCCEEEEEE
T ss_pred CccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcce-----------EeeEEeCCCCcceEEEE
Confidence 4458999999 5 344553 689999999973 432100 00000124567899999
Q ss_pred ccCCCeEEEe--cCCcEEEEEcC-CCcCCCCCcCCcccccCCCCC--ceEecccCCceeeEEEEecCCCCEEEEecc-Cc
Q 021484 97 SNTSELLISY--NDELVYLFEKN-MGLGPSPLSLSPEDLQKREEP--QVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CG 170 (312)
Q Consensus 97 ~~~~~~l~s~--~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~-dg 170 (312)
+|+|++|+++ .++.|++|++. ++ +.. ..+........+..++| +|+|++|++++. ++
T Consensus 153 spdG~~l~~~~~~~~~v~~~~~~~~g----------------~~~~~~~~~~~~~g~~p~~~~~-spdg~~l~v~~~~~~ 215 (365)
T 1jof_A 153 DPTETYLYSADLTANKLWTHRKLASG----------------EVELVGSVDAPDPGDHPRWVAM-HPTGNYLYALMEAGN 215 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTS----------------CEEEEEEEECSSTTCCEEEEEE-CTTSSEEEEEETTTT
T ss_pred CCCCCEEEEEcCCCCEEEEEEECCCC----------------CEEEeeeEecCCCCCCCCEeEE-CCCCCEEEEEECCCC
Confidence 9999977665 37899999997 54 221 22221110123889999 999999887764 78
Q ss_pred eEEEEecc--CCeeE---EEeec-------Ccc------ceEEEE-EcCCCCeEEEEeCC-C-----cEEEccCC-CCCC
Q 021484 171 HLFIWKKK--GGKLV---RLMVG-------DRH------VVNQLE-PHPHIPMFATCGIE-K-----TVKLWAPM-PTDF 224 (312)
Q Consensus 171 ~v~iwd~~--~~~~~---~~~~~-------~~~------~v~~~~-~~p~~~~l~t~~~d-~-----~i~iwd~~-~~~~ 224 (312)
.|.+|++. +++.. ..+.. |.. .+..++ |+|+|++|++++.+ . +|++|++. ++++
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE
Confidence 99999765 56542 12221 121 478999 99999987766533 2 89999986 4443
Q ss_pred CC----CCCChhhhhhhhccCC---CCceeEEecC-CceEEEEEeccc
Q 021484 225 PP----LPDNAEKIMKANKQGR---EDHSRITLTP-DVIMHVLRLQRR 264 (312)
Q Consensus 225 ~~----~~~~~~~~~~~~~~~~---~~~~l~s~~~-d~~i~i~~~~~~ 264 (312)
.. ...+.... ....+++ ++.+++.+.. ++.+++|++...
T Consensus 296 ~~~~~~~~~~~~~~-~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 296 EKQLFLSPTPTSGG-HSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEEEECSSCCT-TCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEeeeeeecCCCCc-ccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 21 11111112 2233456 6788887776 489999998755
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.68 E-value=1.7e-15 Score=139.20 Aligned_cols=194 Identities=8% Similarity=0.064 Sum_probs=131.3
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCC-----ccEEEEEEccCCCeEEEe
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-----IHITGLAYSNTSELLISY 106 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~s~ 106 (312)
...+++|+|++ .+++++ |+.|++||+.+++... ++..|. .....++|||||++|+.+
T Consensus 18 ~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~Spdg~~l~~~ 79 (740)
T 4a5s_A 18 KLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSV---------------FLENSTFDEFGHSINDYSISPDGQFILLE 79 (740)
T ss_dssp CCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEE---------------EECTTTTTTCCSCCCEEEECTTSSEEEEE
T ss_pred cccccEECCCC-cEEEEc--CCcEEEEECCCCceEE---------------EEechhhhhhcccccceEECCCCCEEEEE
Confidence 46689999999 788886 9999999999887321 112222 223458999999988876
Q ss_pred c-C---------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEe
Q 021484 107 N-D---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK 176 (312)
Q Consensus 107 ~-d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd 176 (312)
. + +.+++||+.++ +. ..+..+... +..++| +|+|+.|+.+ .++.|++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~----------------~~-~~l~~~~~~--~~~~~~-SPdG~~la~~-~~~~i~~~~ 138 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKR----------------QL-ITEERIPNN--TQWVTW-SPVGHKLAYV-WNNDIYVKI 138 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTT----------------EE-CCSSCCCTT--EEEEEE-CSSTTCEEEE-ETTEEEEES
T ss_pred ECCeeeEEEccceEEEEEECCCC----------------cE-EEcccCCCc--ceeeEE-CCCCCEEEEE-ECCeEEEEE
Confidence 4 3 66789999887 33 334455544 899999 9999999888 578999999
Q ss_pred ccCCeeEEEe-ecCccce-----------------EEEEEcCCCCeEEEEeCCC--------------------------
Q 021484 177 KKGGKLVRLM-VGDRHVV-----------------NQLEPHPHIPMFATCGIEK-------------------------- 212 (312)
Q Consensus 177 ~~~~~~~~~~-~~~~~~v-----------------~~~~~~p~~~~l~t~~~d~-------------------------- 212 (312)
+.+++..+.- .++...+ ..+.|||+|+.||.++.|.
T Consensus 139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 9887754321 2222222 3488999999988876332
Q ss_pred ----------cEEEccCCC---C---CCCCCCC------ChhhhhhhhccCCCCceeEEec----CCceEEEEEecccC
Q 021484 213 ----------TVKLWAPMP---T---DFPPLPD------NAEKIMKANKQGREDHSRITLT----PDVIMHVLRLQRRQ 265 (312)
Q Consensus 213 ----------~i~iwd~~~---~---~~~~~~~------~~~~~~~~~~~~~~~~~l~s~~----~d~~i~i~~~~~~~ 265 (312)
+|++||+.+ + ....+.. +... +....|++++..++... .+..|++||+.++.
T Consensus 219 p~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 219 PKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY-LCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE-EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE-EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 478888887 5 3222221 2222 23445778887655543 23578999987654
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=9.7e-15 Score=123.70 Aligned_cols=227 Identities=12% Similarity=0.073 Sum_probs=146.9
Q ss_pred EEEcCCCCcEEEEEeC-CC--eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcE
Q 021484 36 IVIDPRNPNYFAVGGS-DE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 111 (312)
Q Consensus 36 ~~~~p~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i 111 (312)
.+|+|++ +.|+.++. ++ .|.+||+.+++.. .+...+...+..++|+|+|+.|+.. .++.|
T Consensus 41 ~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~~---------------~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 41 KCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVAT---------------QLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp CCBCTTS-CEEEEEECTTSSCEEEEEETTTCEEE---------------ECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred ccCCCCC-CEEEEEEcCCCCceEEEEeCCCCceE---------------EeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 7899999 66666665 67 4888898887632 1223444444467899999988886 58899
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE-ecCCCCEEEEe----------------------cc
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMSG----------------------SD 168 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-~s~~~~~l~~~----------------------~~ 168 (312)
++||+.++ +....+..+... +....| .++++.+++.. ..
T Consensus 105 ~~~d~~~g----------------~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 105 MRVDLATL----------------EENVVYQVPAEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEEECCCC----------------cceeeeechhhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 99999887 444444444432 333322 27899888742 34
Q ss_pred CceEEEEeccCCeeEEEeecCccceEEEEEcC-CCCeEEEEeCC------CcEEEccCCCCCCCCCCCChh-hhhhhhcc
Q 021484 169 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNAE-KIMKANKQ 240 (312)
Q Consensus 169 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~ 240 (312)
+..|++||+.+++.. .+..+...+..++|+| +++.|+.+..+ ..|.++++.+.....+..+.. ..+....+
T Consensus 167 ~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 167 CCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp CEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 578999999988754 4444666789999999 99988877753 378888888776655544332 12233457
Q ss_pred CCCCceeEEecC--C---ceEEEEEecccCcccee---------------EeecCCCccCCC---------CCCCeEEEe
Q 021484 241 GREDHSRITLTP--D---VIMHVLRLQRRQTLAYR---------------ERRYNAADFESD---------EEEGETYLL 291 (312)
Q Consensus 241 ~~~~~~l~s~~~--d---~~i~i~~~~~~~~~~~~---------------~~~~~~~~~~~~---------~~~~~v~~~ 291 (312)
++++..++..+. + ..+++|++......... .++|++..+... .....+|++
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 888886654332 2 24899988765422111 245566555532 345578999
Q ss_pred ecCCCC
Q 021484 292 GFSDSD 297 (312)
Q Consensus 292 ~~~~~~ 297 (312)
+...+.
T Consensus 326 d~~~~~ 331 (388)
T 3pe7_A 326 NMKNGT 331 (388)
T ss_dssp ETTTTE
T ss_pred eccCCc
Confidence 886653
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=144.42 Aligned_cols=203 Identities=4% Similarity=-0.050 Sum_probs=127.8
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCcc---------EEEEEEccCCCe
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIH---------ITGLAYSNTSEL 102 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~ 102 (312)
.+..++|||+| +.|+.+. ++.|++|++.+++.......... ..+..++... ..+++|+|||+.
T Consensus 111 ~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~------~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 111 PIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGRE------NKIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp SBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCBT------TTEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred ccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCCc------CCeEcccccceeeeecccCcccEEECCCCCE
Confidence 57889999999 6777775 78999999988763221110000 0011222222 248999999998
Q ss_pred EEEec-C-C---------------------------------cEEEEEcCCCcCCCCCcCCcccccCCCCC--------c
Q 021484 103 LISYN-D-E---------------------------------LVYLFEKNMGLGPSPLSLSPEDLQKREEP--------Q 139 (312)
Q Consensus 103 l~s~~-d-~---------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--------~ 139 (312)
|++++ | + .|++||+.++ +.. .
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~----------------~~~~~~~~~~~~ 246 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP----------------AYVGPQEVPVPA 246 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH----------------HHHCCEECCCCH
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC----------------CccceeEccCCc
Confidence 88753 3 2 6778888765 221 1
Q ss_pred eEecccCCceeeEEEEecCCCCEEEEeccC----ceEEEEe----ccCCeeEEEe----ecCccceE-----EEEEcCCC
Q 021484 140 VYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWK----KKGGKLVRLM----VGDRHVVN-----QLEPHPHI 202 (312)
Q Consensus 140 ~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d----g~v~iwd----~~~~~~~~~~----~~~~~~v~-----~~~~~p~~ 202 (312)
.+.++. ..+..++| +|+++++++.... ..|++|| ..++++...+ ..|...+. .+.|+|+|
T Consensus 247 ~~~~~~--~~~~~~~~-SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 247 MIASSD--YYFSWLTW-VTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp HHHTSC--EEEEEEEE-SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred cCCCCc--ceEEEeEE-eCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 123344 34899999 9998877774432 3588999 8777765544 35666666 78999999
Q ss_pred CeEEE--EeCCC--cEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeE-EecC----CceEEEEEecc
Q 021484 203 PMFAT--CGIEK--TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRI-TLTP----DVIMHVLRLQR 263 (312)
Q Consensus 203 ~~l~t--~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~----d~~i~i~~~~~ 263 (312)
+.++. ...++ .|.+|++.++....+..+...+.....+ ++..++ +... ++..++|.+..
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV--TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE--CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE--eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 96544 44555 5777888777655554433333333334 444444 4444 47788888754
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=3.3e-14 Score=115.36 Aligned_cols=199 Identities=10% Similarity=0.145 Sum_probs=135.8
Q ss_pred CccceEEEEEc-CCCCcEEEEEeC-CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 29 NSIRLNAIVID-PRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~-p~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
|...+.+++++ +++ +++++... ++.|++||. +++.. ..+...+...+..++++|+|+++++.
T Consensus 75 ~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~-~g~~~--------------~~~~~~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQ-YGQFV--------------RKFGATILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp CBSSEEEEEEETTTT-EEEEEECGGGCEEEEECT-TSCEE--------------EEECTTTCSCEEEEEECTTSCEEEEE
T ss_pred cccCceEEEEEcCCC-eEEEEcCCCCCEEEEECC-CCcEE--------------EEecCccCCCceEEEEeCCCCEEEEE
Confidence 45678899994 666 66666643 899999994 44421 11112234568899999999988776
Q ss_pred -cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 107 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 107 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
.++.|++|+... +....+........+..+++ +++++++++...++.|++||.. ++.+..
T Consensus 139 ~~~~~i~~~~~~g-----------------~~~~~~~~~~~~~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 199 (286)
T 1q7f_A 139 CKVMRVIIFDQNG-----------------NVLHKFGCSKHLEFPNGVVV-NDKQEIFISDNRAHCVKVFNYE-GQYLRQ 199 (286)
T ss_dssp TTTTEEEEECTTS-----------------CEEEEEECTTTCSSEEEEEE-CSSSEEEEEEGGGTEEEEEETT-CCEEEE
T ss_pred CCCCEEEEEcCCC-----------------CEEEEeCCCCccCCcEEEEE-CCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence 588999999653 34444432111123789999 8999988888889999999974 566666
Q ss_pred eecC--ccceEEEEEcCCCCeEEEEeCCC-cEEEccCCCCCCCCCCCChhh-hhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 186 MVGD--RHVVNQLEPHPHIPMFATCGIEK-TVKLWAPMPTDFPPLPDNAEK-IMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 186 ~~~~--~~~v~~~~~~p~~~~l~t~~~d~-~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
+..+ ...+..++++|+|+++++...++ .|++|+.....+..+..+... ......+.+++.++++ +.++.|++|++
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 6433 35788999999999888888776 999999765443333221111 1122335567777777 56899999986
Q ss_pred cc
Q 021484 262 QR 263 (312)
Q Consensus 262 ~~ 263 (312)
..
T Consensus 279 ~~ 280 (286)
T 1q7f_A 279 VQ 280 (286)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=3.2e-15 Score=126.63 Aligned_cols=199 Identities=9% Similarity=0.015 Sum_probs=127.5
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEE--EEccCCCeEEEe
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL--AYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~l~s~ 106 (312)
|...+..++|+|++ +.|+.++.++.|++||+.+++.. .+...+...+... .++|++++++..
T Consensus 79 ~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~---------------~~~~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 79 RGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEEN---------------VVYQVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp SCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEE---------------EEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred CCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcce---------------eeeechhhcccccceeECCCCCeeccc
Confidence 34445567899999 78988888999999999987621 1112233334333 348999877742
Q ss_pred -----------------------cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCE
Q 021484 107 -----------------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEY 162 (312)
Q Consensus 107 -----------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~ 162 (312)
.+..|++||+.++ + ...+..+... +..++| +| +++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g----------------~-~~~l~~~~~~--~~~~~~-sp~dg~~ 202 (388)
T 3pe7_A 143 EIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG----------------E-STVILQENQW--LGHPIY-RPYDDST 202 (388)
T ss_dssp EEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC----------------C-EEEEEEESSC--EEEEEE-ETTEEEE
T ss_pred cccCcccccccccchhhhhhccCCcceEEEEECCCC----------------c-eEEeecCCcc--ccccEE-CCCCCCE
Confidence 2367999999876 3 3444444433 889999 99 9998
Q ss_pred EEEeccC------ceEEEEeccCCeeEEEeecCc--cceEEEEEcCCCCeEEEEeC-CC----cEEEccCCCCCCCCC--
Q 021484 163 VMSGSDC------GHLFIWKKKGGKLVRLMVGDR--HVVNQLEPHPHIPMFATCGI-EK----TVKLWAPMPTDFPPL-- 227 (312)
Q Consensus 163 l~~~~~d------g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~l~t~~~-d~----~i~iwd~~~~~~~~~-- 227 (312)
|+....+ ..|.++|...++. ..+..+. ..+..++|+|+|+.|+..+. ++ .|++||+.+++...+
T Consensus 203 l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 203 VAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp EEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEE
T ss_pred EEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEc
Confidence 8776653 3788888875544 4444343 35788999999998765542 22 399999998864222
Q ss_pred -CCChh--hhhhhhccCCCCceeEEe---------cCCceEEEEEeccc
Q 021484 228 -PDNAE--KIMKANKQGREDHSRITL---------TPDVIMHVLRLQRR 264 (312)
Q Consensus 228 -~~~~~--~~~~~~~~~~~~~~l~s~---------~~d~~i~i~~~~~~ 264 (312)
..... .......+++++..++.. ..+..|++|++...
T Consensus 282 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 282 MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 21100 001112366776666532 45678999998764
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=1.7e-14 Score=121.39 Aligned_cols=199 Identities=9% Similarity=0.065 Sum_probs=129.7
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEcc-CCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCe--EEEe-
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIR-KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL--LISY- 106 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~s~- 106 (312)
..+..++|+|++ ++|++++.+ .|.+|++. ++++... ... ..+ +.+..++|+|+|++ ++++
T Consensus 40 ~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~------------~~~-~~~-g~~~~~~~spdg~~l~~~~~~ 103 (365)
T 1jof_A 40 EPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHE------------ASH-PIG-GHPRANDADTNTRAIFLLAAK 103 (365)
T ss_dssp CCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEE------------EEE-ECC-SSGGGGCTTSCCEEEEEEECS
T ss_pred CCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEe------------eEe-ecC-CCCccEEECCCCCEEEEEEec
Confidence 357789999999 788888877 99999997 6653210 000 001 12345789999983 4443
Q ss_pred -------------cCCcEEEEEcCC-CcCCCCCcCCcccccCCCCCceEec--ccCCceeeEEEEecCCCCEEEEec-cC
Q 021484 107 -------------NDELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGS-DC 169 (312)
Q Consensus 107 -------------~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~s~~~~~l~~~~-~d 169 (312)
.++.+.+|++.. + +....+.. +.....+.+++| +|+|++|+++. .+
T Consensus 104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~ 166 (365)
T 1jof_A 104 QPPYAVYANPFYKFAGYGNVFSVSETG----------------KLEKNVQNYEYQENTGIHGMVF-DPTETYLYSADLTA 166 (365)
T ss_dssp STTCCEEEEEESSSCCEEEEEEECTTC----------------CEEEEEEEEECCTTCCEEEEEE-CTTSSEEEEEETTT
T ss_pred CCcceeccceeecCCceEEEEccCCCC----------------cCcceEeeEEeCCCCcceEEEE-CCCCCEEEEEcCCC
Confidence 478899999964 3 23222221 111133889999 99999888765 46
Q ss_pred ceEEEEecc-CCeeE--EEee--cCccceEEEEEcCCCCeEEEEeC-CCcEEEccCC--CCCC-------CCCCCCh---
Q 021484 170 GHLFIWKKK-GGKLV--RLMV--GDRHVVNQLEPHPHIPMFATCGI-EKTVKLWAPM--PTDF-------PPLPDNA--- 231 (312)
Q Consensus 170 g~v~iwd~~-~~~~~--~~~~--~~~~~v~~~~~~p~~~~l~t~~~-d~~i~iwd~~--~~~~-------~~~~~~~--- 231 (312)
+.|++|++. +++.. ..+. .|...+..++|+|+|+++++++. +++|.+|++. ++++ ..++...
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 899999998 67653 3333 23567899999999999877774 7899999764 3432 1222110
Q ss_pred hh------hhhhhc-cCCCCceeEEecCC-c-----eEEEEEec
Q 021484 232 EK------IMKANK-QGREDHSRITLTPD-V-----IMHVLRLQ 262 (312)
Q Consensus 232 ~~------~~~~~~-~~~~~~~l~s~~~d-~-----~i~i~~~~ 262 (312)
.. ...... ++++++++++...+ . .+.+|++.
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 10 123344 78888877665433 2 89999986
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=1.8e-14 Score=130.77 Aligned_cols=191 Identities=10% Similarity=0.012 Sum_probs=126.8
Q ss_pred EEEEc--CCCCcEEEEE-eCCCeEEEEEcc--C-CeecCCCCCCCCcccccccccccC-----CCccEEEEEEccCCCeE
Q 021484 35 AIVID--PRNPNYFAVG-GSDEYARVYDIR--K-CHWYSPISSDTPVDTFCPRHLIGK-----NNIHITGLAYSNTSELL 103 (312)
Q Consensus 35 ~~~~~--p~~~~~l~~~-~~dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l 103 (312)
...|+ |++..+|+.+ ..+..|.++++. . ++. ..+ .. |...+..++|+|+|+.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~---------------~~l-~~~~~~~~~~~~~~~~~spDg~~l 144 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP---------------RPL-TPVSAVGGGLRWADPVLLPERGEV 144 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC---------------EEC-SCCCCSTTCEEEEEEEEETTTTEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC---------------Eec-cCCccCCCCccccCcEECCCCCEE
Confidence 55565 9994415444 346667777765 2 331 111 12 56678899999999988
Q ss_pred EEe-cC----------CcEEEEEcCC------CcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEE
Q 021484 104 ISY-ND----------ELVYLFEKNM------GLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMS 165 (312)
Q Consensus 104 ~s~-~d----------~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~ 165 (312)
+++ .+ ..|++||+.+ + .. ..+. .+.. .+..++| +|+|++|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------~~-~~l~~~~~~--~~~~~~~-SpDG~~la~ 204 (662)
T 3azo_A 145 WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS----------------AV-RELSDDAHR--FVTGPRL-SPDGRQAVW 204 (662)
T ss_dssp EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG----------------GS-EESSCSCSS--EECCCEE-CTTSSEEEE
T ss_pred EEEEecccCCCCCCceeEEEEEECCCCccccCC----------------ce-eEEEecCCC--cccCceE-CCCCCEEEE
Confidence 775 34 5799999987 4 22 2333 3333 3788899 999999987
Q ss_pred eccC--------ceEEEEecc-CC---eeEEEeecCccceEEEEEcCCCCeEEEEeCCC--cEEEccCCCCCCCCCCCCh
Q 021484 166 GSDC--------GHLFIWKKK-GG---KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TVKLWAPMPTDFPPLPDNA 231 (312)
Q Consensus 166 ~~~d--------g~v~iwd~~-~~---~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~--~i~iwd~~~~~~~~~~~~~ 231 (312)
++.+ ..|++||+. ++ +.......|...+..+.|+|+|+++++++.++ .|.+||+.+++...+..+.
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 7754 479999998 57 44444455678899999999999888888888 6677777666543333222
Q ss_pred hhh--------hhhhccCCCCceeEEecCCceEEEEEec
Q 021484 232 EKI--------MKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 232 ~~~--------~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
... .....+.+++.++++... +..++|.+.
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 221 112223457778888888 889999554
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=7.9e-14 Score=115.61 Aligned_cols=201 Identities=11% Similarity=0.107 Sum_probs=135.7
Q ss_pred ccceEEEEEcCCCCcEEEEEeCC------------------------CeEEEEEccCCeecCCCCCCCCccccccccccc
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSD------------------------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG 85 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (312)
-..+.+++++|++ +++++...+ +.|.+||..++++. ...-.
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--------------~~~~~ 87 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--------------QSSGK 87 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--------------EEECT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--------------eccCC
Confidence 4579999999998 788887776 47999999877632 11112
Q ss_pred CCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe---------cccCCceeeEEEE
Q 021484 86 KNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---------GHRNSQTVKGVNF 155 (312)
Q Consensus 86 ~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~v~~ 155 (312)
.+...+..++++|+|+++++. .++.|++|+..... ..+..+. ++.. ....+++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~---------------~~~~~~~~~~~~g~~~~~~~--~P~~ia~ 150 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE---------------GPLLILGRSMQPGSDQNHFC--QPTDVAV 150 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS---------------CCSEEESBTTBCCCSTTCCS--SEEEEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe---------------EEEEEecccCCCCCCccccC--CCcEEEE
Confidence 344578899999999988876 58999999986531 1233331 2222 3789999
Q ss_pred ecC-CCCEEEEec-cCceEEEEeccCCeeEEEeecC----------ccceEEEEEcCC-CCeEEEEeCCCcEEEccCCCC
Q 021484 156 FGP-NDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGD----------RHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 156 ~s~-~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~----------~~~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~ 222 (312)
+| +++++++.+ .++.|++|+ .+++.+..+... -..+..++++|+ +.++++...++.|++|++.++
T Consensus 151 -~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 151 -EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp -CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred -eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 88 788888886 699999999 457777766422 234789999998 677777778999999999855
Q ss_pred CC-CCC--CCChhhhhhhhccCC------CCceeEEecCCceEEEEEecccC
Q 021484 223 DF-PPL--PDNAEKIMKANKQGR------EDHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 223 ~~-~~~--~~~~~~~~~~~~~~~------~~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
+. ..+ ..+...+.. ..+.+ ++...++...+..+++|++....
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFA-ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp CEEEEECCTTTTTCEEE-EEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred cEEEEEeccccCCCcce-eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence 43 222 112222211 11222 33444445556688999876654
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=2.2e-13 Score=110.45 Aligned_cols=204 Identities=8% Similarity=0.118 Sum_probs=141.3
Q ss_pred CCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEE-ccCCCeEEE
Q 021484 27 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-SNTSELLIS 105 (312)
Q Consensus 27 ~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~s 105 (312)
.+|-..+.+++++|++ +++++...++.|++||..... .. .+........+...+..+++ .++++++++
T Consensus 26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~~-~~---------~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGRF-KF---------QFGECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTSCE-EE---------EECCBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred CCccCCCceEEECCCC-CEEEEECCCCEEEEECCCCcE-EE---------EecccCCCcccccCceEEEEEcCCCeEEEE
Confidence 3566789999999998 788888889999999987332 11 11110011234456889999 577887777
Q ss_pred e-c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE
Q 021484 106 Y-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 106 ~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
. . ++.|++||.. + +....+.... ...+..+++ +++++++++...++.|.+||.. ++.+
T Consensus 95 ~~~~~~~i~~~d~~-g----------------~~~~~~~~~~-~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~ 154 (286)
T 1q7f_A 95 ERSPTHQIQIYNQY-G----------------QFVRKFGATI-LQHPRGVTV-DNKGRIIVVECKVMRVIIFDQN-GNVL 154 (286)
T ss_dssp ECGGGCEEEEECTT-S----------------CEEEEECTTT-CSCEEEEEE-CTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cCCCCCEEEEECCC-C----------------cEEEEecCcc-CCCceEEEE-eCCCCEEEEECCCCEEEEEcCC-CCEE
Confidence 6 3 8999999943 3 3444443221 123789998 8999988888888999999965 6666
Q ss_pred EEee--cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCC--hhhhhhhhccCCCCceeEEecCCc-eEEE
Q 021484 184 RLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN--AEKIMKANKQGREDHSRITLTPDV-IMHV 258 (312)
Q Consensus 184 ~~~~--~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~s~~~d~-~i~i 258 (312)
..+. .+...+..++++|+++++++...++.|++|+.....+..+... ...+ ......+++.++++...++ .|.+
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p-~~i~~d~~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYP-IGVGINSNGEILIADNHNNFNLTI 233 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSE-EEEEECTTCCEEEEECSSSCEEEE
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCC-cEEEECCCCCEEEEeCCCCEEEEE
Confidence 6654 3445689999999999888888899999999866543333221 1112 2334566778888888776 9999
Q ss_pred EEec
Q 021484 259 LRLQ 262 (312)
Q Consensus 259 ~~~~ 262 (312)
|+..
T Consensus 234 ~~~~ 237 (286)
T 1q7f_A 234 FTQD 237 (286)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9843
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=8.4e-14 Score=115.45 Aligned_cols=206 Identities=11% Similarity=0.050 Sum_probs=138.4
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc---cccccCCCccEEEEEEcc-CCCeEEE
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP---RHLIGKNNIHITGLAYSN-TSELLIS 105 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~-~~~~l~s 105 (312)
-.....++++|++ +++++...++.|++|+...... .+..+.. ...-..+...+..++++| ++.++++
T Consensus 90 ~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~--------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 90 FYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEG--------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVS 160 (329)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSC--------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEE
T ss_pred cCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeE--------EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEE
Confidence 4468899999999 7888888899999999864420 0111100 000023345688999999 7888777
Q ss_pred e--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC--------CceeeEEEEecCC-CCEEEEeccCceEEE
Q 021484 106 Y--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--------SQTVKGVNFFGPN-DEYVMSGSDCGHLFI 174 (312)
Q Consensus 106 ~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~v~~~s~~-~~~l~~~~~dg~v~i 174 (312)
. .++.|++|+... ..+..+..... ......+++ +++ +.++++...++.|++
T Consensus 161 d~~~~~~I~~~~~~g-----------------~~~~~~~~~g~~~~~~~~~~~~p~gia~-d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 161 DGYCNSRIVQFSPSG-----------------KFVTQWGEESSGSSPRPGQFSVPHSLAL-VPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp ECSSCCEEEEECTTS-----------------CEEEEECEECCSSSCCTTEESCEEEEEE-ETTTTEEEEEETTTTEEEE
T ss_pred eCCCCCeEEEEcCCC-----------------CEEEEeccCCCCCCCCCcccCCCcEEEE-ECCCCEEEEEECCCCEEEE
Confidence 5 489999999543 33333321110 012788999 888 788888888999999
Q ss_pred EeccCCeeEEEee--cCccceEEEEEcCCCCeEEEE-------eCCCcEEEccCCCCCCCC-C---CCChhhhhhhhccC
Q 021484 175 WKKKGGKLVRLMV--GDRHVVNQLEPHPHIPMFATC-------GIEKTVKLWAPMPTDFPP-L---PDNAEKIMKANKQG 241 (312)
Q Consensus 175 wd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~t~-------~~d~~i~iwd~~~~~~~~-~---~~~~~~~~~~~~~~ 241 (312)
|+..+++.+..+. .+...+..++|+| +..+++. ..+.+|++|++.++++.. + ..+.... ....+.
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p-~~ia~~ 300 (329)
T 3fvz_A 223 FKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP-HDIVAS 300 (329)
T ss_dssp EETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE-EEEEEC
T ss_pred EECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe-eEEEEC
Confidence 9999899888874 3556788999999 3333333 334589999988776422 2 1222222 223356
Q ss_pred CCCceeEEecCCceEEEEEeccc
Q 021484 242 REDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 242 ~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+++.++++...++.|++|++...
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCCEEEEECCCCEEEEEeCCcc
Confidence 67788888888888999887643
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.59 E-value=3.4e-14 Score=128.90 Aligned_cols=199 Identities=12% Similarity=0.143 Sum_probs=130.1
Q ss_pred CccceEEEEEcCCCCcEEEEEeCC----------CeEEEEEccC------CeecCCCCCCCCccccccccccc-CCCccE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSD----------EYARVYDIRK------CHWYSPISSDTPVDTFCPRHLIG-KNNIHI 91 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~d----------g~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i 91 (312)
|...+.+++|+|++ +.|+.++.+ ..|++||+.+ ++ ...+ . .+...+
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~l-~~~~~~~~ 190 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---------------VREL-SDDAHRFV 190 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---------------SEES-SCSCSSEE
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---------------eeEE-EecCCCcc
Confidence 46678999999999 778777766 5899999987 43 1122 2 344567
Q ss_pred EEEEEccCCCeEEEe-cC--------CcEEEEEcC-CCcCCCCCcCCcccccCCCCCceE-ecccCCceeeEEEEecCCC
Q 021484 92 TGLAYSNTSELLISY-ND--------ELVYLFEKN-MGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPND 160 (312)
Q Consensus 92 ~~~~~~~~~~~l~s~-~d--------~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~s~~~ 160 (312)
..++|+|+|+.|+.. .+ ..|++||+. ++. ......+ .++... +..++| +|+|
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~--------------~~~~~~l~~~~~~~--~~~~~~-spdg 253 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR--------------FADTRTLLGGPEEA--IAQAEW-APDG 253 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC--------------EEEEEEEEEETTBC--EEEEEE-CTTS
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc--------------ccccEEeCCCCCce--EcceEE-CCCC
Confidence 789999999988764 34 379999997 330 0022233 333433 889999 9999
Q ss_pred CEEEEeccCc--eEEEEeccCCeeEEEeecCccc--------eEEEEEcCCCCeEEEEeCCCcEEEc--cCCCCCCCCCC
Q 021484 161 EYVMSGSDCG--HLFIWKKKGGKLVRLMVGDRHV--------VNQLEPHPHIPMFATCGIEKTVKLW--APMPTDFPPLP 228 (312)
Q Consensus 161 ~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~~p~~~~l~t~~~d~~i~iw--d~~~~~~~~~~ 228 (312)
++++++..++ .|++||+.+++.......+... +..++|+|+++++++++. +.++|| |+.++.+..+.
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEec
Confidence 9888888888 6777777677655433333222 467889999999999998 999999 66666555554
Q ss_pred CChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 229 DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
.+...+........+.-.+++.+.+....+|.+.
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 4433332110112222334455666655666543
No 173
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.1e-12 Score=105.39 Aligned_cols=197 Identities=10% Similarity=-0.007 Sum_probs=133.9
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 109 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 109 (312)
..+.++++++++ +++++.. ++.|.+||....... .+.......+..++++++|+++++. .++
T Consensus 67 ~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~~---------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 129 (270)
T 1rwi_B 67 YQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQT---------------VLPFDGLNYPEGLAVDTQGAVYVADRGNN 129 (270)
T ss_dssp CSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCCE---------------ECCCCSCSSEEEEEECTTCCEEEEEGGGT
T ss_pred CCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceEe---------------eeecCCcCCCcceEECCCCCEEEEECCCC
Confidence 457889999988 6666655 889999998755311 1111223568899999999977775 588
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecC
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 189 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 189 (312)
.|.+|+..+. .......... ..+.++++ +++++++++...++.|.+||............+
T Consensus 130 ~i~~~~~~~~----------------~~~~~~~~~~--~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (270)
T 1rwi_B 130 RVVKLAAGSK----------------TQTVLPFTGL--NDPDGVAV-DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD 190 (270)
T ss_dssp EEEEECTTCC----------------SCEECCCCSC--CSCCCEEE-CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred EEEEEECCCc----------------eeEeeccccC--CCceeEEE-eCCCCEEEEECCCCEEEEEecCCCceEeecccC
Confidence 9999975443 1111111111 22778998 899998777777899999998876544333333
Q ss_pred ccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 190 RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 190 ~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
...+..++++++|.++++...++.|.+|+..+........ +...+ ....+.+++.++++...++.|+++++...
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p-~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP-LAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCE-EEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCc-eeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 3678899999999878777778999999987765422221 11112 22335566778888888888888876554
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.54 E-value=1.1e-12 Score=119.92 Aligned_cols=234 Identities=10% Similarity=0.089 Sum_probs=143.8
Q ss_pred CccceEEEEEcCCCCcEEEEEeCC-C----eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSD-E----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 103 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 103 (312)
|...+..++|||+| ++||.+..+ | .|++||+.+++.. ..... ...+..++|+|||+.|
T Consensus 123 ~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~--------------~~~~~--~~~~~~~~wspDg~~l 185 (710)
T 2xdw_A 123 GTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKEL--------------PDVLE--RVKFSCMAWTHDGKGM 185 (710)
T ss_dssp SCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEE--------------EEEEE--EECSCCEEECTTSSEE
T ss_pred CCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------ccccc--CcccceEEEEeCCCEE
Confidence 45578899999999 677665443 3 8999999988732 11101 1125678999999977
Q ss_pred EEe-cCCc----------------EEEEEcCCCcCCCCCcCCcccccCCCC--CceEecccCCceeeEEEEecCCCCEEE
Q 021484 104 ISY-NDEL----------------VYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYVM 164 (312)
Q Consensus 104 ~s~-~d~~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~~s~~~~~l~ 164 (312)
+.+ .++. |++|++.++ .. ...+........+..+.| +|+|++|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~----------------~~~~~~v~~~~~~~~~~~~~~~-SpDg~~l~ 248 (710)
T 2xdw_A 186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD----------------QSEDILCAEFPDEPKWMGGAEL-SDDGRYVL 248 (710)
T ss_dssp EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC----------------GGGCEEEECCTTCTTCEEEEEE-CTTSCEEE
T ss_pred EEEEECCccccccccccccCCCCEEEEEECCCC----------------cccceEEeccCCCCeEEEEEEE-cCCCCEEE
Confidence 765 4544 999999775 22 122233222233778898 99999998
Q ss_pred Eecc-----CceEEEEeccC------Ce-eEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEccCCCCC---CC
Q 021484 165 SGSD-----CGHLFIWKKKG------GK-LVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTD---FP 225 (312)
Q Consensus 165 ~~~~-----dg~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~~---~~ 225 (312)
..+. +..|++||+.+ ++ ....+..+...+.. .|+|+|+.|+..+.. ..|.+|++.+.. ..
T Consensus 249 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 327 (710)
T 2xdw_A 249 LSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK 327 (710)
T ss_dssp EEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred EEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce
Confidence 7764 57899999986 43 35566666655554 488999887666543 369999988763 23
Q ss_pred CCCCChh-hhhhhhccCCCCceeEEecCCceEEE--EEecccCcccee----------EeecCCCccC----CCCCCCeE
Q 021484 226 PLPDNAE-KIMKANKQGREDHSRITLTPDVIMHV--LRLQRRQTLAYR----------ERRYNAADFE----SDEEEGET 288 (312)
Q Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~i--~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~~~v 288 (312)
.+..+.. ..+....+.+++.++++...++..++ |++..+...... ..+++...+. +....+.+
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 3333332 23333334456677888888875554 454233211111 2223333332 33455678
Q ss_pred EEeecCCCC
Q 021484 289 YLLGFSDSD 297 (312)
Q Consensus 289 ~~~~~~~~~ 297 (312)
|.+|...+.
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 888876554
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=4.9e-14 Score=119.51 Aligned_cols=191 Identities=8% Similarity=-0.039 Sum_probs=121.8
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEE-------------------EE
Q 021484 35 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITG-------------------LA 95 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~ 95 (312)
.+.|+|++ +.|+.++.++.|++||+.+++..... ..+...... +.
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~---------------~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 148 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIY---------------TVDEEWKGYGTWVANSDCTKLVGIEILKRD 148 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEE---------------ECCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEE---------------ecccccCCCCCEEEeccCCccccccccccc
Confidence 47899999 78888888889999999877532111 111111111 35
Q ss_pred EccCCCeEEEe------cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEecc
Q 021484 96 YSNTSELLISY------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSD 168 (312)
Q Consensus 96 ~~~~~~~l~s~------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~ 168 (312)
|+|+++.++.. .+..|++||+.++ +... +..+... +..+.| +| +++.|+..+.
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g----------------~~~~-~~~~~~~--~~~~~~-sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETG----------------ELEV-IHQDTAW--LGHPIY-RPFDDSTVGFCHE 208 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTC----------------CEEE-EEEESSC--EEEEEE-ETTEEEEEEEEEC
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCC----------------cEEe-eccCCcc--cccceE-CCCCCCEEEEEec
Confidence 67888755442 3567999999876 3333 3334433 888999 88 7887766544
Q ss_pred C------ceEEEEeccCCeeEEEeecC--ccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCCCCCCCChhhhh
Q 021484 169 C------GHLFIWKKKGGKLVRLMVGD--RHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPPLPDNAEKIM 235 (312)
Q Consensus 169 d------g~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~ 235 (312)
+ ..|++||+..++.. .+..+ ...+..++|+|+|+.|+.++.+ +.|++||+.+++...+..... .
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~- 285 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-C- 285 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-E-
T ss_pred CCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-C-
Confidence 3 46889998766543 33323 2357889999999987776543 459999998876432211111 1
Q ss_pred hhhccCC-CCceeEEec----------------CCceEEEEEecccC
Q 021484 236 KANKQGR-EDHSRITLT----------------PDVIMHVLRLQRRQ 265 (312)
Q Consensus 236 ~~~~~~~-~~~~l~s~~----------------~d~~i~i~~~~~~~ 265 (312)
. ..+++ ++.+++..+ .+..+++|++....
T Consensus 286 ~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 286 S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 1 34666 777776643 34788999876543
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=4.3e-14 Score=119.86 Aligned_cols=198 Identities=9% Similarity=0.004 Sum_probs=126.0
Q ss_pred cceEEEEEcCCCCcEEEEEe-CC--CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-
Q 021484 31 IRLNAIVIDPRNPNYFAVGG-SD--EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 106 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~-~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~- 106 (312)
..+..++|+|+| +.|+... .+ ..|.+||+.+++... +...+......+.|+|+|+.|+..
T Consensus 36 ~~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~~---------------l~~~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 36 NYFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAVQ---------------LTEGKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEEE---------------CCCSSCBCTTTCEECTTSSEEEEEE
T ss_pred eeeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEEE---------------eecCCCCccccceECCCCCEEEEEE
Confidence 346788999999 5655543 33 468888988776321 111222222236899999988775
Q ss_pred cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeE-------------------EEEecCCCCEEEEe-
Q 021484 107 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG-------------------VNFFGPNDEYVMSG- 166 (312)
Q Consensus 107 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------v~~~s~~~~~l~~~- 166 (312)
.++.|++||+.++ +.......+... ... +.| +|+++.++.+
T Consensus 100 ~~~~l~~~d~~~~----------------~~~~~~~~~~~~--~~~g~~l~~~~~~~~~~~~~~~~~~-spdg~~~~~~~ 160 (396)
T 3c5m_A 100 NELNLMKVDLETL----------------EEQVIYTVDEEW--KGYGTWVANSDCTKLVGIEILKRDW-QPLTSWEKFAE 160 (396)
T ss_dssp TTTEEEEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGC-CCCCSHHHHHH
T ss_pred cCCcEEEEECCCC----------------CcEEEEeccccc--CCCCCEEEeccCCcccccccccccc-CCCCcceeeee
Confidence 5778999999876 333333322211 111 345 7788877654
Q ss_pred ----ccCceEEEEeccCCeeEEEeecCccceEEEEEcC-CCCeEEEEeCC------CcEEEccCCCCCCCCCCCCh-hhh
Q 021484 167 ----SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNA-EKI 234 (312)
Q Consensus 167 ----~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~-~~~ 234 (312)
..+..|++||+.+++..... .+...+..+.|+| ++..++..+.+ ..|.+|++.++....+..+. ...
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred eccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 46778999999988765444 4566789999999 78876666543 46888998777654443322 222
Q ss_pred hhhhccCCCCceeEEecCC-----ceEEEEEeccc
Q 021484 235 MKANKQGREDHSRITLTPD-----VIMHVLRLQRR 264 (312)
Q Consensus 235 ~~~~~~~~~~~~l~s~~~d-----~~i~i~~~~~~ 264 (312)
+....+++++..++..+.+ +.+++|++...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 3334578888876665433 45999987654
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=3.4e-12 Score=105.77 Aligned_cols=198 Identities=8% Similarity=0.094 Sum_probs=132.4
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 107 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~- 107 (312)
+...+.+++|+|++ ++++++..++.|.+||..+++.. .+...+...+.+++++|+|+++++..
T Consensus 43 ~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~---------------~~~~~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 43 KGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIK---------------RPFVSHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp SCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE---------------EEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred cCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEE---------------EEeeCCCCCcceEEECCCCcEEEEeCC
Confidence 44567899999998 78888888999999999877521 11123456799999999999877764
Q ss_pred C----CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc------CceEEEEec
Q 021484 108 D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKK 177 (312)
Q Consensus 108 d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~------dg~v~iwd~ 177 (312)
+ +.|++||..++ .....+........+.++++ +++++++++... .+.|..++.
T Consensus 107 ~~~~~~~i~~~d~~~~----------------~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 107 DFKSTGGIFAATENGD----------------NLQDIIEDLSTAYCIDDMVF-DSKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp TSSSCCEEEEECTTSC----------------SCEEEECSSSSCCCEEEEEE-CTTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred CCCCCceEEEEeCCCC----------------EEEEEEccCccCCcccceEE-CCCCCEEEEeccccccCCCceEEEEeC
Confidence 5 58999998775 22212221111133889998 899988877654 367777777
Q ss_pred cCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEccCCC-CC-CCC--------CCCChhhhhhhhccCCCCce
Q 021484 178 KGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMP-TD-FPP--------LPDNAEKIMKANKQGREDHS 246 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~-~~-~~~--------~~~~~~~~~~~~~~~~~~~~ 246 (312)
.+++... +..+...+..++|+|+++.+ ++.+.++.|.+|++.+ +. ... +.++ .......+.+++.+
T Consensus 170 ~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 170 DFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDNL 246 (333)
T ss_dssp TSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCCE
T ss_pred CCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCCE
Confidence 6555433 32233457899999999865 4555678999999864 22 111 1111 11222345567777
Q ss_pred eEEecCCceEEEEEec
Q 021484 247 RITLTPDVIMHVLRLQ 262 (312)
Q Consensus 247 l~s~~~d~~i~i~~~~ 262 (312)
+++...++.|.+|+..
T Consensus 247 ~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 247 YVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEETTTEEEEECTT
T ss_pred EEEEcCCCEEEEECCC
Confidence 7877778889999863
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.53 E-value=3.4e-13 Score=112.41 Aligned_cols=180 Identities=12% Similarity=0.141 Sum_probs=116.0
Q ss_pred ceEEEEEcCCCCcEEEEEeCC---C--eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 32 RLNAIVIDPRNPNYFAVGGSD---E--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
.+..++|+|+| +.|+..+.+ + .|.+|++.+++.. .+ ..+.. +..++|+|+|+.|+..
T Consensus 60 ~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~---------------~l-~~~~~-~~~~~wspdg~~l~~~ 121 (347)
T 2gop_A 60 NATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSK---------------KI-LEAKN-IRSLEWNEDSRKLLIV 121 (347)
T ss_dssp SCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEE---------------EE-EEESE-EEEEEECTTSSEEEEE
T ss_pred cCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceE---------------EE-EcCCC-ccceeECCCCCEEEEE
Confidence 47789999999 667666543 3 3777788776521 11 11223 8899999999977764
Q ss_pred c-C---------------------------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 107 N-D---------------------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 107 ~-d---------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
. + ..|++||+.++ +.++.+.. . . +..++| +|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~----------------~~~~~l~~-~-~--~~~~~~-sp 180 (347)
T 2gop_A 122 GFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE----------------EVIEEFEK-P-R--FSSGIW-HR 180 (347)
T ss_dssp EECCCC---------CCCC---------CEEEEEEEETTTT----------------EEEEEEEE-E-T--TCEEEE-ET
T ss_pred EccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC----------------eEEeeecC-C-C--cccccC-CC
Confidence 3 2 46889998776 34244444 2 3 788999 89
Q ss_pred CCCEEEEeccC---------ceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC--------CcEEEccCCC
Q 021484 159 NDEYVMSGSDC---------GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE--------KTVKLWAPMP 221 (312)
Q Consensus 159 ~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d--------~~i~iwd~~~ 221 (312)
++ +++++..+ ..|+++| +++.. .+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred Ce-EEEEEecccccccccccccEEEeC--CCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C
Confidence 99 77777543 2455555 55543 44334 455544 9999998877744 3688888 4
Q ss_pred CCCCCCC-CChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 222 TDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
++...+. .+...+.....++ ++ ++++++.++..++| +.
T Consensus 252 ~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 252 KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 4432222 2233332223456 66 88888999999999 87
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.52 E-value=1e-12 Score=105.56 Aligned_cols=197 Identities=9% Similarity=-0.017 Sum_probs=130.5
Q ss_pred ceEEEEEcCCCCcEEE-EEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCc
Q 021484 32 RLNAIVIDPRNPNYFA-VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 110 (312)
...+++++|++ ++++ +...++.|..|+..+.... .....+...+.+++++++|+++++..++.
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~---------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 88 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTT---------------VLPFNGLYQPQGLAVDGAGTVYVTDFNNR 88 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----E---------------ECCCCSCCSCCCEEECTTCCEEEEETTTE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccc---------------eEeeCCcCCcceeEECCCCCEEEEcCCCE
Confidence 67899999998 6777 5477899999997654311 01012234567899999999777755889
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 190 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 190 (312)
|++||..+. ....+.... ...+..+++ +++++++++...++.|.+|+..+...........
T Consensus 89 i~~~d~~~~-----------------~~~~~~~~~-~~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 149 (270)
T 1rwi_B 89 VVTLAAGSN-----------------NQTVLPFDG-LNYPEGLAV-DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL 149 (270)
T ss_dssp EEEECTTCS-----------------CCEECCCCS-CSSEEEEEE-CTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC
T ss_pred EEEEeCCCc-----------------eEeeeecCC-cCCCcceEE-CCCCCEEEEECCCCEEEEEECCCceeEeeccccC
Confidence 999998764 222222111 123789998 8899988887788999999866554333222333
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCC-CChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 191 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 191 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
..+..++++|+++++++...++.|.+|+..+....... ...... ......+++.++++...++.|.+|+....
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p-~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP-WGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE-EEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc-eEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 46788999999998777777889999998876532211 111111 22335566777788878888999986543
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=1.4e-12 Score=106.37 Aligned_cols=189 Identities=12% Similarity=0.085 Sum_probs=122.4
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe--
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-- 106 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-- 106 (312)
+...+.+++++|++ +++++...++.|.+||..+++.... .. .........+..++++|+|+++++.
T Consensus 67 ~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~----------~~-~~~~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 67 PSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESI----------AD-SFEGKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp SCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEE----------EC-EETTEECCCCCCEEECTTSCEEEEECS
T ss_pred CCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEE----------ee-ccCCCCCCCCCCEEECCCCCEEEECCc
Confidence 34568999999998 7777777778999999977753110 00 0001112345679999999988862
Q ss_pred --c--------------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCc
Q 021484 107 --N--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG 170 (312)
Q Consensus 107 --~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg 170 (312)
. .+.|+.++.. + ....+..+... ...++| +|+++.+++.+.++
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-----------------~~~~~~~~~~~--~~gi~~-s~dg~~lv~~~~~~ 193 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPD-G-----------------TLSAPIRDRVK--PNGLAF-LPSGNLLVSDTGDN 193 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTT-S-----------------CEEEEECCCSS--EEEEEE-CTTSCEEEEETTTT
T ss_pred cccccccccccccccCCCcEEEEECCC-C-----------------CEEEeecCCCC--CccEEE-CCCCCEEEEeCCCC
Confidence 1 2355555543 2 22333334333 788999 99999988888889
Q ss_pred eEEEEecc-CCee---EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhcc-CCCCc
Q 021484 171 HLFIWKKK-GGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ-GREDH 245 (312)
Q Consensus 171 ~v~iwd~~-~~~~---~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 245 (312)
.|++|++. +++. ...+..+...+..++++++|+++++. ++.|.+|+..+..+..+..+.. + ....+ .+++.
T Consensus 194 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~-~~~~f~~~d~~ 269 (296)
T 3e5z_A 194 ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT-T-SNLCFGGPEGR 269 (296)
T ss_dssp EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC-C-CEEEEESTTSC
T ss_pred eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC-c-eeEEEECCCCC
Confidence 99999986 4554 23333345567789999999977666 7899999988554433332322 3 22223 45666
Q ss_pred eeEEecCCc
Q 021484 246 SRITLTPDV 254 (312)
Q Consensus 246 ~l~s~~~d~ 254 (312)
.|...+.++
T Consensus 270 ~L~v~t~~~ 278 (296)
T 3e5z_A 270 TLYMTVSTE 278 (296)
T ss_dssp EEEEEETTE
T ss_pred EEEEEcCCe
Confidence 666666553
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=9e-13 Score=120.23 Aligned_cols=199 Identities=9% Similarity=0.047 Sum_probs=126.9
Q ss_pred CCccceEEEEEcCCCCcEEE-----EEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCe
Q 021484 28 MNSIRLNAIVIDPRNPNYFA-----VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 102 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~-----~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 102 (312)
+|...+.+++|||+| ++|| .|+.+..|++||+.+++... ...+ ... ....++|+|+|+.
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~------------~~~~-~~~--~~~~~~wspDg~~ 181 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK------------VDVI-EGG--KYATPKWTPDSKG 181 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS------------SCCB-SCC--TTCCCEECTTSSE
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC------------Cccc-Ccc--cccceEEecCCCE
Confidence 456679999999999 6666 33445689999999887320 0011 111 1157899999997
Q ss_pred EEEe-cCCc-------------EEEEEcCCCcCCCCCcCCcccccCCCC--CceEecccCCceeeEEEEecCCCCEEEEe
Q 021484 103 LISY-NDEL-------------VYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYVMSG 166 (312)
Q Consensus 103 l~s~-~d~~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~~s~~~~~l~~~ 166 (312)
|+.+ .+.. |++|++.++ .. ...+........+..+.| +|+|++|+..
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~----------------~~~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~ 244 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTE----------------PSKDTVVHERTGDPTTFLQSDL-SRDGKYLFVY 244 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSC----------------GGGCEEEECCCCCTTCEEEEEE-CTTSCCEEEE
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCCC----------------chhceEEEecCCCCEEEEEEEE-CCCCCEEEEE
Confidence 7775 4554 999999876 21 122332222123788998 9999999887
Q ss_pred ccCc----eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe---CCCcEEEccCCCCCC---CCCCCCh-hhhh
Q 021484 167 SDCG----HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTDF---PPLPDNA-EKIM 235 (312)
Q Consensus 167 ~~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~---~d~~i~iwd~~~~~~---~~~~~~~-~~~~ 235 (312)
+.++ .|++++..+++. ..+..+...+....+ +++.+++... .++.|.+|++.++.. ..+..+. ...+
T Consensus 245 ~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l 322 (695)
T 2bkl_A 245 ILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL 322 (695)
T ss_dssp EEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred EeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence 7666 788887665554 444445556666667 5555444443 257899999977642 2222222 2222
Q ss_pred hhhccCCCCceeEEecCCceEEEEEec
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
....+. ++.++++...|+..++|.+.
T Consensus 323 ~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 323 LSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 222233 56788888889988888765
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=7.8e-12 Score=103.52 Aligned_cols=216 Identities=4% Similarity=-0.071 Sum_probs=141.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|.+||..+.+....+.. ......+++++++ +++++...++.|.+||..++++...+....
T Consensus 66 v~viD~~t~~~~~~i~~------------~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~------- 125 (328)
T 3dsm_A 66 IFAIDINTFKEVGRITG------------FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPD------- 125 (328)
T ss_dssp EEEEETTTCCEEEEEEC------------CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTT-------
T ss_pred EEEEECcccEEEEEcCC------------CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCC-------
Confidence 35677776654333321 2357889999987 666665588999999999887432211000
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 158 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~ 158 (312)
..+.......+++ .+++++++. .++.|.++|+.++ +....+.... ....+++ ++
T Consensus 126 ---~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~----------------~~~~~i~~g~---~p~~i~~-~~ 181 (328)
T 3dsm_A 126 ---MDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD----------------KVVDELTIGI---QPTSLVM-DK 181 (328)
T ss_dssp ---CCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT----------------EEEEEEECSS---CBCCCEE-CT
T ss_pred ---ccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC----------------eEEEEEEcCC---CccceEE-cC
Confidence 0011113445666 455556664 3889999999887 5555554322 2567888 89
Q ss_pred CCCEEEEeccC----------ceEEEEeccCCeeEEEeecC-ccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCC
Q 021484 159 NDEYVMSGSDC----------GHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL 227 (312)
Q Consensus 159 ~~~~l~~~~~d----------g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~ 227 (312)
++++++++..+ +.|.++|..+++....+... ...+..++++|+++.+..+.. .|.+||+.++++...
T Consensus 182 dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 182 YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR 259 (328)
T ss_dssp TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS
T ss_pred CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeee
Confidence 99987777665 79999999999887777533 236789999999998877754 999999988775321
Q ss_pred C--CChhhhhhhhccCC-CCceeEEe----cCCceEEEEEec
Q 021484 228 P--DNAEKIMKANKQGR-EDHSRITL----TPDVIMHVLRLQ 262 (312)
Q Consensus 228 ~--~~~~~~~~~~~~~~-~~~~l~s~----~~d~~i~i~~~~ 262 (312)
. ...........+.+ ++.+.++. ..++.|.+|+..
T Consensus 260 ~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 260 PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 1 11111222233555 56677777 677889999866
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.49 E-value=9.6e-13 Score=110.13 Aligned_cols=184 Identities=8% Similarity=0.007 Sum_probs=126.2
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCc
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 110 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 110 (312)
.+++.+++++.. .++++|+.+ .+++|++...+-..... ... +.+... ..+.. |+.++| ++.+|+.+.++.
T Consensus 38 ~~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~-~~~---~~~~~~-~~lp~-V~~l~f--d~~~L~v~~~~~ 107 (388)
T 1xip_A 38 ASLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSD-STP---LTFKWE-KEIPD-VIFVCF--HGDQVLVSTRNA 107 (388)
T ss_dssp SCCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSS-SCC---CCCSEE-EECTT-EEEEEE--ETTEEEEEESSE
T ss_pred ccccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccc-ccc---ccceEE-eeCCC-eeEEEE--CCCEEEEEcCCc
Confidence 368999999988 688888887 56669986543100000 000 111111 23455 999999 888888889999
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 190 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 190 (312)
|++||+.+. ........+... +.++.+..| .+++++.||.|.+||+.+++... +.
T Consensus 108 l~v~dv~sl----------------~~~~~~~~~~~~--v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~ 162 (388)
T 1xip_A 108 LYSLDLEEL----------------SEFRTVTSFEKP--VFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LA 162 (388)
T ss_dssp EEEEESSST----------------TCEEEEEECSSC--EEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EE
T ss_pred EEEEEchhh----------------hccCccceeecc--eeeEEecCC---CEEEEECCCCEEEEEccCCcccc----cc
Confidence 999999875 333445555544 788877433 28888999999999999887653 34
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC---CCCC---------CChhhhhhhhccCCCCceeEEecC
Q 021484 191 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF---PPLP---------DNAEKIMKANKQGREDHSRITLTP 252 (312)
Q Consensus 191 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~l~s~~~ 252 (312)
..|++++|||.| ++.+..||++++|++.++.. .+++ ++...+... .|..+..++++...
T Consensus 163 ~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI-~wl~~~~flv~y~~ 233 (388)
T 1xip_A 163 QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSV-TILSPQDFLAVFGN 233 (388)
T ss_dssp ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEE-EESSSSEEEEEEEC
T ss_pred CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEE-EEecCCeEEEEEcC
Confidence 689999999999 67888999999999887662 2331 133344333 35567777776443
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=3.6e-12 Score=103.89 Aligned_cols=194 Identities=11% Similarity=0.028 Sum_probs=130.3
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-C
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-d 108 (312)
.....+++|+|++..+++++..++.|..|+..++ .. .+ ..+...+.+++++++|+++++.. +
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~----------~~------~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS----------PE------MHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE----------EE------ESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE----------EE------ECCCCCcceeeECCCCcEEEEecCC
Confidence 3457899999998448888899999999998865 21 11 23456788999999999888764 7
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC--CceeeEEEEecCCCCEEEE----ec-------------cC
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGPNDEYVMS----GS-------------DC 169 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~~s~~~~~l~~----~~-------------~d 169 (312)
+.|.+||..++ +.......... ...+..+++ +++|+++++ |+ ..
T Consensus 90 ~~i~~~d~~~g----------------~~~~~~~~~~~~~~~~~~~i~~-d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 90 RRLERQREPGG----------------EWESIADSFEGKKLNSPNDVCL-APDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp TEEEEECSTTC----------------CEEEEECEETTEECCCCCCEEE-CTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred CeEEEEcCCCC----------------cEEEEeeccCCCCCCCCCCEEE-CCCCCEEEECCccccccccccccccccCCC
Confidence 89999998765 22222111111 112678998 899998887 33 13
Q ss_pred ceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCC-CCCC----CCCCCChhhhhhhhccCCCC
Q 021484 170 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM-PTDF----PPLPDNAEKIMKANKQGRED 244 (312)
Q Consensus 170 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~-~~~~----~~~~~~~~~~~~~~~~~~~~ 244 (312)
+.|..++.. ++. ..+..+...+..++|+|+++.+++.+.++.|.+|++. .+.+ ..+ ...........+.+++
T Consensus 153 ~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 153 RWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGG 229 (296)
T ss_dssp CEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS
T ss_pred cEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCC
Confidence 467777765 443 4445566677899999999998777788999999986 3332 111 1111111223455677
Q ss_pred ceeEEecCCceEEEEEec
Q 021484 245 HSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 245 ~~l~s~~~d~~i~i~~~~ 262 (312)
.++++. ++.|.+|+..
T Consensus 230 ~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 230 LIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CEEEEE--TTEEEEECTT
T ss_pred CEEEEc--CCeEEEECCC
Confidence 777766 7888899864
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.45 E-value=2.7e-12 Score=107.75 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=56.9
Q ss_pred EEEecCCCCEEEEecc-----------CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC
Q 021484 153 VNFFGPNDEYVMSGSD-----------CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 153 v~~~s~~~~~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 221 (312)
++| +++++.++++.. .+.|.+||+.+++.+..+..+. +..++|+|+|++|++++. ++|.+||..+
T Consensus 259 ~a~-~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 259 VGL-HRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEE-ETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEE-ecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 677 788888776543 3589999999999999998776 899999999999888886 9999999998
Q ss_pred C
Q 021484 222 T 222 (312)
Q Consensus 222 ~ 222 (312)
+
T Consensus 335 ~ 335 (361)
T 2oiz_A 335 P 335 (361)
T ss_dssp S
T ss_pred C
Confidence 7
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.45 E-value=5.3e-11 Score=98.55 Aligned_cols=160 Identities=8% Similarity=0.035 Sum_probs=107.8
Q ss_pred CccceEEEEEcCCCCcEEEEEeCC----CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSD----EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 104 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 104 (312)
+...+.+++++|++ +++++...+ +.|.+||..++.... +.. ...+...+..++++|+|++++
T Consensus 85 ~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~----------~~~---~~~~~~~~~~i~~d~~g~l~v 150 (333)
T 2dg1_A 85 HKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQD----------IIE---DLSTAYCIDDMVFDSKGGFYF 150 (333)
T ss_dssp SSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEE----------EEC---SSSSCCCEEEEEECTTSCEEE
T ss_pred CCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEE----------EEc---cCccCCcccceEECCCCCEEE
Confidence 34579999999998 677777666 689999988765210 000 012345688999999999877
Q ss_pred EecC-------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEE-EeccCceEEEEe
Q 021484 105 SYND-------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWK 176 (312)
Q Consensus 105 s~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~-~~~~dg~v~iwd 176 (312)
+... +.|+.++..++ ....+...... +..++| ++++++|+ +.+.++.|.+|+
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~~~~~~~--~~~i~~-~~dg~~l~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 151 TDFRGYSTNPLGGVYYVSPDFR-----------------TVTPIIQNISV--ANGIAL-STDEKVLWVTETTANRLHRIA 210 (333)
T ss_dssp EECCCBTTBCCEEEEEECTTSC-----------------CEEEEEEEESS--EEEEEE-CTTSSEEEEEEGGGTEEEEEE
T ss_pred EeccccccCCCceEEEEeCCCC-----------------EEEEeecCCCc--ccceEE-CCCCCEEEEEeCCCCeEEEEE
Confidence 7542 45666665443 22223222222 788998 99998654 556688999999
Q ss_pred ccC-CeeEEE--------eecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 177 KKG-GKLVRL--------MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 177 ~~~-~~~~~~--------~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+.+ ++.+.. +.++ ..+..++++++|+++++...++.|.+||.....
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCE
T ss_pred ecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCE
Confidence 863 332221 1122 367889999999988888788999999986443
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=5.7e-12 Score=101.56 Aligned_cols=183 Identities=8% Similarity=0.004 Sum_probs=131.6
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCC-ccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-IHITGLAYSNTSELLISYNDELVYLFEKNMGLGP 122 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~ 122 (312)
++|++++.++.|++||..+++.+.. + ..+. ..+.++++.|+|++++ +.++.|+.||. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~--------------~-~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G--- 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWE--------------Y-PLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DG--- 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEE--------------E-ECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TS---
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEE--------------e-CCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CC---
Confidence 7999999999999999988984322 1 2222 3577889999999888 45778999998 56
Q ss_pred CCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc-CceEEEEeccCCeeEEEeec------CccceEE
Q 021484 123 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVG------DRHVVNQ 195 (312)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~------~~~~v~~ 195 (312)
+.+..+..... ..+.++.+ .++|+++++.+. ++.|..+|. +++.+..+.. +......
T Consensus 66 -------------~~~W~~~~~~~-~~~~~~~~-~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 66 -------------RELWNIAAPAG-CEMQTARI-LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp -------------CEEEEEECCTT-CEEEEEEE-CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred -------------CEEEEEcCCCC-ccccccEE-CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 67777775422 23788888 899999999877 888988886 6877766642 1124556
Q ss_pred EEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 196 LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 196 ~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+++.++|+++++...++.|..||.....+-.+... .... .....+++..+++...++.+..+|..+.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~-~~~~-~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLS-GTPF-SSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTTSCEEEEEECS-SCCC-EEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred ceECCCCCEEEEecCCCEEEEECCCCCEEEEEECC-CCcc-ceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 77899999999999999999999984333222211 1111 1223456788888888888888876544
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.40 E-value=2.6e-11 Score=110.90 Aligned_cols=221 Identities=5% Similarity=-0.026 Sum_probs=135.2
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCe----------------EEEEEccCCe
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEY----------------ARVYDIRKCH 64 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~----------------i~iwd~~~~~ 64 (312)
|++||+.+.+....... ...+..++|+|++ +.|+.++.++. |++|++.+++
T Consensus 153 i~v~d~~tg~~~~~~~~------------~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 153 IKFMKVDGAKELPDVLE------------RVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp EEEEETTTTEEEEEEEE------------EECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred EEEEECCCCCCCccccc------------CcccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 46788877654332211 1225689999999 67777776655 9999998765
Q ss_pred ecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-c-----CCcEEEEEcCC------CcCCCCCcCCcccc
Q 021484 65 WYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N-----DELVYLFEKNM------GLGPSPLSLSPEDL 132 (312)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~-----d~~i~iwd~~~------~~~~~~~~~~~~~~ 132 (312)
.. .. .... ...|...+..+.|+|+|++|+.. . +..|++||+.+ +.
T Consensus 220 ~~-------~~---~v~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~------------ 276 (710)
T 2xdw_A 220 SE-------DI---LCAE-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI------------ 276 (710)
T ss_dssp GG-------CE---EEEC-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS------------
T ss_pred cc-------ce---EEec-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc------------
Confidence 10 00 0000 02245567899999999977663 3 46899999975 30
Q ss_pred cCCCCCceEecccCCceeeEEEEecCCCCEEEEecc----CceEEEEeccCCee--EEEeecCcc--ceEEEEEcCCCCe
Q 021484 133 QKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD----CGHLFIWKKKGGKL--VRLMVGDRH--VVNQLEPHPHIPM 204 (312)
Q Consensus 133 ~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~----dg~v~iwd~~~~~~--~~~~~~~~~--~v~~~~~~p~~~~ 204 (312)
.....+..+... +.. .| +++|+.|+..+. .+.|.+||+.+++. ...+..|.. .+..++|++++.+
T Consensus 277 ---~~~~~l~~~~~~--~~~-~~-s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 349 (710)
T 2xdw_A 277 ---LKWVKLIDNFEG--EYD-YV-TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL 349 (710)
T ss_dssp ---CCCEEEECSSSS--CEE-EE-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred ---cceEEeeCCCCc--EEE-EE-eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE
Confidence 134555555543 443 35 678887765554 33699999987642 344444543 6888999988788
Q ss_pred EEEEeCCCc--EEEccCCCCC-CCCCCCChhhhhhhhccCCCCc-eeEEec---CCceEEEEEecccC
Q 021484 205 FATCGIEKT--VKLWAPMPTD-FPPLPDNAEKIMKANKQGREDH-SRITLT---PDVIMHVLRLQRRQ 265 (312)
Q Consensus 205 l~t~~~d~~--i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~s~~---~d~~i~i~~~~~~~ 265 (312)
+++...|+. |.+|++.++. ...+..+...+ ....+++++. ++++.+ ..+.+..||+.++.
T Consensus 350 v~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v-~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 350 VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV-VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECCCSSEE-EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCEEEEEEEECCCCCEEEecCCCCceE-EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888888885 5667775554 33333332222 2222444544 333333 34788889886654
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.39 E-value=8.1e-12 Score=104.03 Aligned_cols=180 Identities=9% Similarity=0.106 Sum_probs=111.1
Q ss_pred eEEEEEcCCCCcEEEEEeC---------------------------CCeEEEEEccCCeecCCCCCCCCccccccccccc
Q 021484 33 LNAIVIDPRNPNYFAVGGS---------------------------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG 85 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~---------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (312)
+..++|+|++ +.|+.++. ...|++||+.+++.. ..+ .
T Consensus 106 ~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~--------------~~l-~ 169 (347)
T 2gop_A 106 IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI--------------EEF-E 169 (347)
T ss_dssp EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE--------------EEE-E
T ss_pred ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE--------------eee-c
Confidence 8899999999 66666653 257889999877621 111 1
Q ss_pred CCCccEEEEEEccCCCeEEEec-C------C-cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec
Q 021484 86 KNNIHITGLAYSNTSELLISYN-D------E-LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 157 (312)
Q Consensus 86 ~~~~~i~~~~~~~~~~~l~s~~-d------~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s 157 (312)
. . .+..++|+|+| +++++. + . ...+|.+.++ ....+..+ .. +.. + +
T Consensus 170 ~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-----------------~~~~l~~~-~~--~~~--~-s 223 (347)
T 2gop_A 170 K-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-----------------KEEKMFEK-VS--FYA--V-D 223 (347)
T ss_dssp E-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-----------------EEEEEEEE-ES--EEE--E-E
T ss_pred C-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-----------------ceEEeccC-cc--eee--E-C
Confidence 1 2 56788999999 777653 3 2 3344444333 23333333 22 433 4 7
Q ss_pred CCCCEEEEeccC--------ceEEEEeccCCeeEEEeecCccceEE-EEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCC
Q 021484 158 PNDEYVMSGSDC--------GHLFIWKKKGGKLVRLMVGDRHVVNQ-LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP 228 (312)
Q Consensus 158 ~~~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~~~~~v~~-~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~ 228 (312)
|+|++|+.++.+ ..|++|| +++.......+...+.. +.|+ ++ ++++++.++.++|| +.++....+.
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~ 298 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA 298 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe
Confidence 899988776643 4788888 56655444556677886 8999 88 88889999999999 8744432222
Q ss_pred CChhhhhhhhccCCCCceeEEecCCceE-EEEEec
Q 021484 229 DNAEKIMKANKQGREDHSRITLTPDVIM-HVLRLQ 262 (312)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i-~i~~~~ 262 (312)
.+...+ ....+++ .++++.+.++.. ++|.+.
T Consensus 299 ~~~~~v-~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 KGRHWI-MGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp CSSSEE-EEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cCCCeE-EeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 222222 2222344 455665555443 677654
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=6.7e-11 Score=95.32 Aligned_cols=176 Identities=6% Similarity=0.005 Sum_probs=122.5
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|++||..+.+..-.+... ....+.++.++|++ ++++ +.++.|+.||. +++.+..
T Consensus 17 v~~~d~~tG~~~w~~~~~----------~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~------------ 70 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLE----------KGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWN------------ 70 (276)
T ss_dssp EEEEETTTTEEEEEEECC----------TTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEE------------
T ss_pred EEEEECCCCeEEEEeCCC----------ccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEE------------
Confidence 457777666533222221 11357899999998 7777 45788999998 6763322
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC----CceeeEEE
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVN 154 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~v~ 154 (312)
+.......+.++.+.++|+++++. . ++.|..+|.. + +.+..+..... ......++
T Consensus 71 --~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-G----------------k~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 71 --IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-G----------------EVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp --EECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-S----------------CEEEEEEECCSCSSGGGSCSCCE
T ss_pred --EcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-C----------------CEEEEEeccCCCCcccccccCce
Confidence 101123457889999999988885 4 6677777753 3 34444431110 01245566
Q ss_pred EecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 155 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 155 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
. .++++++++...++.|..||.. |+.+.++..+ ..+.++...++++++++++.++.|..+|..++++
T Consensus 132 ~-~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 132 K-NKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp E-CTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred E-CCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 6 8899999999999999999998 9998888754 3456788899999999988888999999997663
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=3e-10 Score=92.27 Aligned_cols=195 Identities=10% Similarity=0.082 Sum_probs=132.0
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 107 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~- 107 (312)
+...+.++++++++ +++++...++.|..||.. ++.. .. ....+...+..+++.++|.++++..
T Consensus 13 ~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~-------------~~-~~~~~~~~~~~i~~~~~g~l~v~~~~ 76 (299)
T 2z2n_A 13 QDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKIT-------------EY-PLPTPDAKVMCLTISSDGEVWFTENA 76 (299)
T ss_dssp SSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEE-------------EE-ECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred cCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeE-------------Ee-cCCcccCceeeEEECCCCCEEEeCCC
Confidence 34578999999998 677776668999999987 5421 00 0012346788999999999888764
Q ss_pred CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE-e
Q 021484 108 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-M 186 (312)
Q Consensus 108 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~ 186 (312)
++.|..|+.... ...+........+..+++ +++++++++...++.|..||. +++.... .
T Consensus 77 ~~~i~~~~~~g~------------------~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~ 136 (299)
T 2z2n_A 77 ANKIGRITKKGI------------------IKEYTLPNPDSAPYGITE-GPNGDIWFTEMNGNRIGRITD-DGKIREYEL 136 (299)
T ss_dssp TTEEEEECTTSC------------------EEEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred CCeEEEECCCCc------------------EEEEeCCCcCCCceeeEE-CCCCCEEEEecCCceEEEECC-CCCEEEecC
Confidence 888999987521 122221111123888998 889988888878899999998 5554332 2
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCC--CCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
..+...+..++++|++.++++...++.|..|+. +++...+ ......+ ......+++.+.++...++.+..|+.
T Consensus 137 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 137 PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP-VGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc-eeEEECCCCCEEEEccCCceEEEECC
Confidence 234457899999999988887777789999998 5543221 1111111 22234556677777777788888876
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.37 E-value=1.7e-11 Score=112.54 Aligned_cols=197 Identities=12% Similarity=0.124 Sum_probs=122.3
Q ss_pred CccceEEEEEcCCCCcEEEEEeCC-----CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSD-----EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 103 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 103 (312)
|...+..++|||+| ++|+.++.+ ..|++||+.+++.. .. ..+...+..++|+|+ +.|
T Consensus 161 ~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~--------------~~--~~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 161 GATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPL--------------AD--ELKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp --EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEE--------------EE--EEEEEESCCCEESTT-SEE
T ss_pred CCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------Cc--cCCCceeccEEEECC-CEE
Confidence 34468899999999 666665433 35999999988732 10 001111247899999 866
Q ss_pred EEe-cCC--------------cEEEEEcCCCcCCCCCcCCcccccCCCC--CceEecccCCceeeEEEEecCCCCEEEEe
Q 021484 104 ISY-NDE--------------LVYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYVMSG 166 (312)
Q Consensus 104 ~s~-~d~--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~~s~~~~~l~~~ 166 (312)
+.+ .++ .|++|++.++ .. ...+........+..+.| +|+|++|+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~----------------~~~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~ 285 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTP----------------QSADQPVFATPELPKRGHGASV-SSDGRWVVIT 285 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSC----------------GGGCEEEECCTTCTTCEEEEEE-CTTSCEEEEE
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCC----------------chhCEEEeccCCCCeEEEEEEE-CCCCCEEEEE
Confidence 664 343 3889998765 21 122332222123788998 9999998877
Q ss_pred ccCc-----eEEEEeccCC--eeEEEeecCccceEEEEEcCCCCeEEEEeCC----CcEEEccCCCC--CCCCCCCChhh
Q 021484 167 SDCG-----HLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPT--DFPPLPDNAEK 233 (312)
Q Consensus 167 ~~dg-----~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~--~~~~~~~~~~~ 233 (312)
+.++ .|++||+.++ ++...+..+...+.... +|+++.|+..+.+ +.|.+|++.+. ....+..+...
T Consensus 286 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp EECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS
T ss_pred EEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC
Confidence 7544 8999999877 31455555555555553 4889887777653 45999998774 22222222222
Q ss_pred hhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 234 IMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 234 ~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
.+....+. ++.++++...++..++|.+.
T Consensus 365 ~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 365 NLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 22222222 55677888888888888665
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.5e-11 Score=102.85 Aligned_cols=134 Identities=7% Similarity=-0.021 Sum_probs=99.5
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecC
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 108 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d 108 (312)
++. |+.++| ++ +.|+++ .++.|++||+.+... ... ...|...+.++.+.+.. +++...|
T Consensus 87 lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~--------------~~~-~~~~~~~v~~i~~~~p~-~av~~~d 145 (388)
T 1xip_A 87 IPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSE--------------FRT-VTSFEKPVFQLKNVNNT-LVILNSV 145 (388)
T ss_dssp CTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTC--------------EEE-EEECSSCEEEEEECSSE-EEEEETT
T ss_pred CCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhc--------------cCc-cceeecceeeEEecCCC-EEEEECC
Confidence 456 999999 66 788888 889999999986541 111 13445667787776653 4444579
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCee--EEEe
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL--VRLM 186 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~ 186 (312)
|.|.+||+.++ ... . +... |++++| +|+| ++.|..||++++|+...++. ..++
T Consensus 146 G~L~v~dl~~~----------------~~~-~---~~~~--Vs~v~W-SpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 146 NDLSALDLRTK----------------STK-Q---LAQN--VTSFDV-TNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEF 200 (388)
T ss_dssp SEEEEEETTTC----------------CEE-E---EEES--EEEEEE-CSSE--EEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEccCC----------------ccc-c---ccCC--ceEEEE-cCCc--eEEEEcCCcEEEEcCCCcccccccee
Confidence 99999999865 332 1 2333 999999 9999 67888999999999987775 5556
Q ss_pred ------e---cCccceEEEEEcCCCCeEEEE
Q 021484 187 ------V---GDRHVVNQLEPHPHIPMFATC 208 (312)
Q Consensus 187 ------~---~~~~~v~~~~~~p~~~~l~t~ 208 (312)
. +|...|.++.|.+++.++++=
T Consensus 201 ~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 201 SLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp CCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 2 367889999999998887663
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.35 E-value=8.8e-10 Score=97.47 Aligned_cols=213 Identities=9% Similarity=0.040 Sum_probs=136.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEcc--CCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~ 78 (312)
|.++|..+.+....+.. ...+..+.|+|++ +++++++.|+.|.+||+. +.+.+
T Consensus 179 V~viD~~t~~v~~~i~~------------g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v------------ 233 (567)
T 1qks_A 179 IALIDGSTYEIKTVLDT------------GYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV------------ 233 (567)
T ss_dssp EEEEETTTCCEEEEEEC------------SSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE------------
T ss_pred EEEEECCCCeEEEEEeC------------CCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe------------
Confidence 34677766554333322 2246689999999 788888899999999995 55421
Q ss_pred cccccccCCCccEEEEEEc----cCCCeEEEe--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc--------
Q 021484 79 CPRHLIGKNNIHITGLAYS----NTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-------- 144 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~----~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 144 (312)
..+ .. ......++|+ |+|++++++ .++.|.++|..+. +.++.+...
T Consensus 234 --~~i-~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~----------------~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 234 --AEI-KI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL----------------EPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp --EEE-EC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC----------------CEEEEEECCEECTTTCC
T ss_pred --EEE-ec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC----------------cEEEEEecccccccccc
Confidence 122 11 2345789999 699977664 3899999998776 555554421
Q ss_pred --cCCceeeEEEEecCCC-CEEEEeccCceEEEEeccCCeeE--EEeecCccceEEEEEcCCCCeEEEEe-CCCcEEEcc
Q 021484 145 --RNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWA 218 (312)
Q Consensus 145 --~~~~~v~~v~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd 218 (312)
.. ..+..+.. ++++ .+++.....|.|.++|..+.+.+ ..+. ......++.|+|++++++++. .++.|.++|
T Consensus 294 ~~p~-~rva~i~~-s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 294 YHPE-PRVAAILA-SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp EESC-CCEEEEEE-CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccCC-CceEEEEE-cCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 11 12667776 6654 45566677899999998765432 2222 234567889999999966655 678999999
Q ss_pred CCCCCCCC-CC-----CChhhhhhhhccCCC-CceeEEec-CCceEEEEEecc
Q 021484 219 PMPTDFPP-LP-----DNAEKIMKANKQGRE-DHSRITLT-PDVIMHVLRLQR 263 (312)
Q Consensus 219 ~~~~~~~~-~~-----~~~~~~~~~~~~~~~-~~~l~s~~-~d~~i~i~~~~~ 263 (312)
+.++++.. +. .|... ..++..++ +...++.. .++.|.+++...
T Consensus 371 ~~t~kl~~~i~vgg~~Phpg~--g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 371 TKEGKLVAIEDTGGQTPHPGR--GANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTTTEEEEEEECSSSSBCCTT--CEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCcEEEEEeccCcCCCCcc--ceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 99876421 11 12111 11234554 33444443 468899998765
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.33 E-value=5.3e-11 Score=108.60 Aligned_cols=198 Identities=7% Similarity=-0.081 Sum_probs=120.3
Q ss_pred EEEEEcCCCCcEEEEEeCCCe-------------EEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCC
Q 021484 34 NAIVIDPRNPNYFAVGGSDEY-------------ARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS 100 (312)
Q Consensus 34 ~~~~~~p~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 100 (312)
..++|+|++ +.|+.++.|.. |++|++.+++.. .. .... ...+...+..+.|+|+|
T Consensus 171 ~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-------~~---lv~~-~~~~~~~~~~~~~SpDG 238 (695)
T 2bkl_A 171 ATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-------DT---VVHE-RTGDPTTFLQSDLSRDG 238 (695)
T ss_dssp CCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-------CE---EEEC-CCCCTTCEEEEEECTTS
T ss_pred cceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-------ce---EEEe-cCCCCEEEEEEEECCCC
Confidence 679999999 67887777665 999999877510 00 0000 12345678899999999
Q ss_pred CeEEEe-cCC----cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec---cCceE
Q 021484 101 ELLISY-NDE----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---DCGHL 172 (312)
Q Consensus 101 ~~l~s~-~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~---~dg~v 172 (312)
++|+.. .++ .|++++..++ ..+.+..+... +....+ + ++.+++... .++.|
T Consensus 239 ~~l~~~~~~~~~~~~l~~~~~~~~-----------------~~~~l~~~~~~--~~~~~~-~-~g~l~~~s~~~~~~~~l 297 (695)
T 2bkl_A 239 KYLFVYILRGWSENDVYWKRPGEK-----------------DFRLLVKGVGA--KYEVHA-W-KDRFYVLTDEGAPRQRV 297 (695)
T ss_dssp CCEEEEEEETTTEEEEEEECTTCS-----------------SCEEEEECSSC--CEEEEE-E-TTEEEEEECTTCTTCEE
T ss_pred CEEEEEEeCCCCceEEEEEcCCCC-----------------ceEEeecCCCc--eEEEEe-c-CCcEEEEECCCCCCCEE
Confidence 977664 444 5666655443 34445555443 555555 4 455545444 35899
Q ss_pred EEEeccCCee---EEEeecC-ccceEEEEEcCCCCeEEEEeCCCcEEEccCC--CCCCCCCCCChhhhhhhhccCCCCce
Q 021484 173 FIWKKKGGKL---VRLMVGD-RHVVNQLEPHPHIPMFATCGIEKTVKLWAPM--PTDFPPLPDNAEKIMKANKQGREDHS 246 (312)
Q Consensus 173 ~iwd~~~~~~---~~~~~~~-~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
.+||+.+++. ...+..+ ...+..++|+ ++.++++...|+..+||.+. ++....+..+....+....+++++..
T Consensus 298 ~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~ 376 (695)
T 2bkl_A 298 FEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDD 376 (695)
T ss_dssp EEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSE
T ss_pred EEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCE
Confidence 9999987653 3333333 4467888888 66778888899988887654 33233332221222222334455544
Q ss_pred eE-E---ecCCceEEEEEecccC
Q 021484 247 RI-T---LTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 247 l~-s---~~~d~~i~i~~~~~~~ 265 (312)
++ + ....+.+++|++.++.
T Consensus 377 l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 377 AYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEcCCCCCCEEEEEECCCCc
Confidence 44 3 3344788999876653
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=1.9e-10 Score=98.05 Aligned_cols=196 Identities=11% Similarity=0.021 Sum_probs=124.9
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 109 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 109 (312)
.....++|+|++ +++++...++.|+.||..++++.. +... ..... ++|+++++.|+.+ .++
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~---------------~~~~-~~~~~-ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTT---------------VHPG-FKGGK-PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEE---------------EEET-CCBCB-CEECTTSSEEEEEBSST
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEE---------------eecc-CCCCc-eeEecCCCcEEEEecCC
Confidence 367899999998 788887788999999998776321 1111 12233 8999999877665 344
Q ss_pred --cEEEEEcCCCcCCCCCcCCcccccCCCCCceE---ec-ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE
Q 021484 110 --LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 110 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
.|++++...+ .....+ .. .. ..+.++++ +|++..|+.+..++.|+.||..++...
T Consensus 193 ~~~I~~~d~~~~----------------~~~~~~g~~~~~~~--~~p~~iav-~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 193 THTVYVYMKASG----------------WAPTRIGQLGSTFS--GKIGAVAL-DETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp TCEEEEEEGGGT----------------TCEEEEEECCTTSC--SCCCBCEE-CTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred CceEEEEEcCCC----------------ceeEEeeeccchhc--CCcEEEEE-eCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 7889988765 222222 01 22 23788998 885555555777899999999877543
Q ss_pred EE----eecCccce-E-EEEEcCC-CCeEEEEeCCCcEEEccCCCCCCCCCCCC------hh--------hhhhhhccCC
Q 021484 184 RL----MVGDRHVV-N-QLEPHPH-IPMFATCGIEKTVKLWAPMPTDFPPLPDN------AE--------KIMKANKQGR 242 (312)
Q Consensus 184 ~~----~~~~~~~v-~-~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~------~~--------~~~~~~~~~~ 242 (312)
.. ..++...- . .++|+|+ +.++++-..++.|+.|+..... ..+.++ .. ....-..+.+
T Consensus 254 ~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 254 LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 22 22222222 3 8999995 5556666678899999977531 111110 00 0012223556
Q ss_pred CCceeEEec-CCceEEEEEeccc
Q 021484 243 EDHSRITLT-PDVIMHVLRLQRR 264 (312)
Q Consensus 243 ~~~~l~s~~-~d~~i~i~~~~~~ 264 (312)
++.++++-. .+..|+.|++...
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTT
T ss_pred CCCEEEEeCCCCCEEEEEECCCC
Confidence 777888888 8899999986544
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.31 E-value=6.9e-10 Score=90.89 Aligned_cols=199 Identities=11% Similarity=0.044 Sum_probs=124.4
Q ss_pred CccceEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCeecCC-CCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 29 NSIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSP-ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 29 h~~~v~~~~~~p~-~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
+...+.+++++++ + +++++.. .+.|.+||.. ++.... .. .........+..++++++|+++++.
T Consensus 69 ~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~~~~-----------~~~~~~~~~~~~i~~d~~g~l~v~~ 134 (314)
T 1pjx_A 69 YGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEIAKK-----------DSEGRRMQGCNDCAFDYEGNLWITA 134 (314)
T ss_dssp EECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEECCSB-----------CTTSCBCBCCCEEEECTTSCEEEEE
T ss_pred CCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEEEec-----------cCCCccccCCcCEEECCCCCEEEEe
Confidence 3456889999998 6 5555544 4478899988 653211 00 0001122457899999999977775
Q ss_pred c-C---------------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec----CCCCEEE-E
Q 021484 107 N-D---------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG----PNDEYVM-S 165 (312)
Q Consensus 107 ~-d---------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s----~~~~~l~-~ 165 (312)
. + +.|..|+.. + +.. .+..+... ...+++ + ++++.|+ +
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-g----------------~~~-~~~~~~~~--~~~i~~-~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 135 PAGEVAPADYTRSMQEKFGSIYCFTTD-G----------------QMI-QVDTAFQF--PNGIAV-RHMNDGRPYQLIVA 193 (314)
T ss_dssp CBCBCTTSCCCBTTSSSCEEEEEECTT-S----------------CEE-EEEEEESS--EEEEEE-EECTTSCEEEEEEE
T ss_pred cCcccccccccccccCCCCeEEEECCC-C----------------CEE-EeccCCCC--cceEEE-ecccCCCCCEEEEE
Confidence 3 4 467777654 3 222 22222222 678888 8 8887654 4
Q ss_pred eccCceEEEEecc-CCee-----EEEeecCc-cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhh
Q 021484 166 GSDCGHLFIWKKK-GGKL-----VRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKA 237 (312)
Q Consensus 166 ~~~dg~v~iwd~~-~~~~-----~~~~~~~~-~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~ 237 (312)
...++.|.+|++. +++. ...+..+. ..+..++++++|+++++...++.|.+||..+++. ..+..+...+ ..
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~ 272 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKP-SN 272 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCE-EE
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCc-ee
Confidence 4668999999986 4542 23333343 5678899999999988888889999999985543 2222222222 22
Q ss_pred hccCCCCc-eeEEecCCceEEEEEecc
Q 021484 238 NKQGREDH-SRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 238 ~~~~~~~~-~l~s~~~d~~i~i~~~~~ 263 (312)
..+.+++. +.++...++.|..|++..
T Consensus 273 i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 273 LHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 23456666 555666667788887654
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.30 E-value=2.1e-09 Score=87.23 Aligned_cols=194 Identities=7% Similarity=0.044 Sum_probs=131.1
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 108 (312)
...+.++++++++ .++++...++.|..|+.. ++. ..+. . ......+..+++.++|.++++. .+
T Consensus 56 ~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~----------~~~~---~-~~~~~~~~~i~~~~~g~l~v~~~~~ 119 (299)
T 2z2n_A 56 DAKVMCLTISSDG-EVWFTENAANKIGRITKK-GII----------KEYT---L-PNPDSAPYGITEGPNGDIWFTEMNG 119 (299)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE----------EEEE---C-SSTTCCEEEEEECTTSCEEEEETTT
T ss_pred cCceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE----------EEEe---C-CCcCCCceeeEECCCCCEEEEecCC
Confidence 4568899999988 677777778899999976 321 0000 1 1234568899999999988776 47
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE-ee
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 187 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~ 187 (312)
+.|.+||. ++ +. ..+........+..+++ +++++++++...++.|..||. +++.... +.
T Consensus 120 ~~i~~~d~-~g----------------~~-~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 179 (299)
T 2z2n_A 120 NRIGRITD-DG----------------KI-REYELPNKGSYPSFITL-GSDNALWFTENQNNAIGRITE-SGDITEFKIP 179 (299)
T ss_dssp TEEEEECT-TC----------------CE-EEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred ceEEEECC-CC----------------CE-EEecCCCCCCCCceEEE-cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCC
Confidence 89999998 43 12 22221111123789998 899988888777899999999 6665432 23
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCC--CCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 188 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 188 ~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
.+...+..+++++++.++++...++.|.+|+. ++....+ ......+ ......+++.+.++...++.+..|+.
T Consensus 180 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 180 TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARP-HAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCc-eeEEECCCCCEEEeccCCceEEEECC
Confidence 34456889999999998777767889999998 5543222 1111222 22334556777777767788888886
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.27 E-value=2.7e-10 Score=94.22 Aligned_cols=223 Identities=7% Similarity=-0.028 Sum_probs=139.0
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 109 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~ 109 (312)
.....+++.. + +++++...++.|.+||..+++.+. .+ . .......++++++++++++. .++
T Consensus 44 ~~~~~i~~~~-~-~lyv~~~~~~~v~viD~~t~~~~~--------------~i-~-~~~~p~~i~~~~~g~lyv~~~~~~ 105 (328)
T 3dsm_A 44 DVAQSMVIRD-G-IGWIVVNNSHVIFAIDINTFKEVG--------------RI-T-GFTSPRYIHFLSDEKAYVTQIWDY 105 (328)
T ss_dssp SCEEEEEEET-T-EEEEEEGGGTEEEEEETTTCCEEE--------------EE-E-CCSSEEEEEEEETTEEEEEEBSCS
T ss_pred ccceEEEEEC-C-EEEEEEcCCCEEEEEECcccEEEE--------------Ec-C-CCCCCcEEEEeCCCeEEEEECCCC
Confidence 3467787754 3 677777778999999999887421 11 1 23567899999999766666 589
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC---CceeeEEEEecCCCCEEEEec-cCceEEEEeccCCeeEEE
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~v~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~ 185 (312)
.|.+||..++ +....+..... ......+++ . .+..+++.. .++.|.++|+.+++.+..
T Consensus 106 ~v~~iD~~t~----------------~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 106 RIFIINPKTY----------------EITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEEEEETTTT----------------EEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred eEEEEECCCC----------------eEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 9999999876 44444443220 002566776 2 344444443 488999999999998888
Q ss_pred eecCccceEEEEEcCCCCeEEEEeCC----------CcEEEccCCCCCCC-CCCCChhhhhhhhccCCCCceeEEecCCc
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCGIE----------KTVKLWAPMPTDFP-PLPDNAEKIMKANKQGREDHSRITLTPDV 254 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~~d----------~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 254 (312)
+.... ....++++|+|++++++..+ +.|.++|..+.++. .+.-..........+++++..+.....
T Consensus 168 i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 168 LTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp EECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred EEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 76533 45689999999987776654 78999999887642 221111111223345666666665544
Q ss_pred eEEEEEecccCccc--eeEe-ecCCCccCCCCCCCeEEEee
Q 021484 255 IMHVLRLQRRQTLA--YRER-RYNAADFESDEEEGETYLLG 292 (312)
Q Consensus 255 ~i~i~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~v~~~~ 292 (312)
.+.+||..+..... +... ......+..+.+++.+|+.+
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 78888876553211 1110 01122233334456677776
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.25 E-value=2.9e-09 Score=89.20 Aligned_cols=176 Identities=9% Similarity=0.002 Sum_probs=115.3
Q ss_pred CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-----------CCcEEEEEcCCC
Q 021484 51 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-----------DELVYLFEKNMG 119 (312)
Q Consensus 51 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-----------d~~i~iwd~~~~ 119 (312)
.|+.|.+||..++++. ..+ ..+..+ .++|+|+|+++++++ ++.|.+||+.+.
T Consensus 29 ~d~~v~v~D~~t~~~~--------------~~i-~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFL--------------GMV-PTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGCEEEEEETTTCCEE--------------EEE-ECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred ccCeEEEEECCCCeEE--------------EEe-cCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4789999999888632 111 222333 899999999776642 567999999876
Q ss_pred cCCCCCcCCcccccCCCCCceEeccc----CCceeeEEEEecCCCCEEEEecc--CceEEEEeccCCeeEEE-eecCccc
Q 021484 120 LGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRL-MVGDRHV 192 (312)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~-~~~~~~~ 192 (312)
+....+.... .......+++ +|+|++|++++. ++.|.+||+.+++.+.. +... .
T Consensus 92 ----------------~~~~~i~~~~~~~~~g~~p~~i~~-spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~ 152 (361)
T 2oiz_A 92 ----------------TFEKEISLPPKRVQGLNYDGLFRQ-TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--G 152 (361)
T ss_dssp ----------------CEEEEEEECTTBCCBCCCGGGEEE-CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--T
T ss_pred ----------------cEEEEEEcCccccccCCCcceEEE-CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--C
Confidence 5555554321 0122678888 999999998874 68999999999998887 6532 2
Q ss_pred eEEEEEcCCC-CeEEEEeCCCcEEEccCCC-CCCC-------CCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 193 VNQLEPHPHI-PMFATCGIEKTVKLWAPMP-TDFP-------PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 193 v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
...+.+.|++ ..+++.+.||.+.+|++.. ++.. .+......+ .....+++..++..+.++.+.++++..
T Consensus 153 ~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~v~v~d~~~ 230 (361)
T 2oiz_A 153 CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI--FIAPALDKDKAHFVSYYGNVYSADFSG 230 (361)
T ss_dssp EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB--CSCCEECSSEEEEEBTTSEEEEEECSS
T ss_pred cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce--EEEecccCCEEEEEeCCCeEEEEEecC
Confidence 2335677876 5578888999999998754 3321 111111111 111233445556666788899999754
Q ss_pred c
Q 021484 264 R 264 (312)
Q Consensus 264 ~ 264 (312)
.
T Consensus 231 ~ 231 (361)
T 2oiz_A 231 D 231 (361)
T ss_dssp S
T ss_pred C
Confidence 3
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.23 E-value=5.4e-09 Score=84.79 Aligned_cols=194 Identities=9% Similarity=0.038 Sum_probs=130.0
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-C
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-d 108 (312)
...+.++++++++ +++++...++.|..||.. ++.. . .........+..+++.+++.++++.. +
T Consensus 19 ~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~-------------~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 82 (300)
T 2qc5_A 19 DSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK-------------E-FEVPTPDAKVMCLIVSSLGDIWFTENGA 82 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE-------------E-EECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE-------------E-EECCCCCCcceeEEECCCCCEEEEecCC
Confidence 3468899999998 677777778999999987 5421 0 00122335688999999999777764 7
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE-ee
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 187 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~ 187 (312)
+.|..||.. + +. ..+........+.++++ +++++++++...++.|..+|.. ++.... +.
T Consensus 83 ~~v~~~d~~-g----------------~~-~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 142 (300)
T 2qc5_A 83 NKIGKLSKK-G----------------GF-TEYPLPQPDSGPYGITE-GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP 142 (300)
T ss_dssp TEEEEECTT-S----------------CE-EEEECSSTTCCEEEEEE-CSTTCEEEEETTTTEEEEECTT-SCEEEEECS
T ss_pred CeEEEECCC-C----------------Ce-EEecCCCCCCCCccceE-CCCCCEEEEccCCCeEEEECCC-CCEEEccCC
Confidence 889999976 4 22 22222111123889998 8899988887778899999987 654422 23
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCC--CCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 188 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 188 ~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
.....+..+++.++++++++...++.|..++. .++...+ ......+ ......+++.+.++....+.+.+++.
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAP-VGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCc-ceEEECCCCCEEEEccCCCEEEEEcC
Confidence 33457889999999997777766789999998 4432211 1111111 22224456667777766777888875
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=1.1e-09 Score=89.71 Aligned_cols=200 Identities=10% Similarity=0.140 Sum_probs=127.6
Q ss_pred ceEEEEEcCCCCcEEEE-------EeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC-CCeE
Q 021484 32 RLNAIVIDPRNPNYFAV-------GGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELL 103 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 103 (312)
...+++|++++ +++++ +..++.|..||..+++... +..... .++...+..++++++ ++++
T Consensus 19 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------~~~~~~-~~~~~~~~~i~~~~~~g~l~ 86 (314)
T 1pjx_A 19 GAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------ICKPEV-NGYGGIPAGCQCDRDANQLF 86 (314)
T ss_dssp TCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE----------EECCEE-TTEECCEEEEEECSSSSEEE
T ss_pred CccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------EEeccc-CCCCCCCceEEEecCCCcEE
Confidence 46799999988 77777 6778999999987775311 100000 123456889999999 8877
Q ss_pred EEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCce-Eecc--cCCceeeEEEEecCCCCEEEEeccC-----------
Q 021484 104 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGH--RNSQTVKGVNFFGPNDEYVMSGSDC----------- 169 (312)
Q Consensus 104 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~v~~v~~~s~~~~~l~~~~~d----------- 169 (312)
++...+.|.+||.. + +.... .... .....+.++++ +++++++++...+
T Consensus 87 v~~~~~~l~~~d~~-g----------------~~~~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-G----------------TFEEIAKKDSEGRRMQGCNDCAF-DYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEETTTEEEEEETT-S----------------CEEECCSBCTTSCBCBCCCEEEE-CTTSCEEEEECBCBCTTSCCCBTT
T ss_pred EEECCCCEEEEeCC-C----------------CEEEEEeccCCCccccCCcCEEE-CCCCCEEEEecCcccccccccccc
Confidence 77655589999987 4 22111 1100 11123788998 8999888777655
Q ss_pred ----ceEEEEeccCCeeEEEeecCccceEEEEEc----CCCCeEE-EEeCCCcEEEccCC-CCC------CCCCCCCh-h
Q 021484 170 ----GHLFIWKKKGGKLVRLMVGDRHVVNQLEPH----PHIPMFA-TCGIEKTVKLWAPM-PTD------FPPLPDNA-E 232 (312)
Q Consensus 170 ----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~----p~~~~l~-t~~~d~~i~iwd~~-~~~------~~~~~~~~-~ 232 (312)
+.|..++.. ++..... .+......++|+ |+++.+. +...++.|.+|++. .+. ...+..+. .
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred cCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 678888876 5543332 233456889999 9997654 44567899999976 332 11222111 1
Q ss_pred hhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 233 KIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 233 ~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.. ....+.+++.++++...++.|.+|+..+.
T Consensus 227 ~p-~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 227 GA-DGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EE-EEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CC-CceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 11 22335567778888777888999986633
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=4.5e-09 Score=85.56 Aligned_cols=226 Identities=9% Similarity=0.032 Sum_probs=137.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 111 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 111 (312)
-.-+..|+|++..++++...++.|+.||..+++.. . ......+.+++++++|+++++. ++.|
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---------------~--~~~~~~~~~i~~~~dG~l~v~~-~~~l 75 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---------------R--VTMDAPVSSVALRQSGGYVATI-GTKF 75 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---------------E--EECSSCEEEEEEBTTSSEEEEE-TTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE---------------E--EeCCCceEEEEECCCCCEEEEE-CCeE
Confidence 35688999976578888888999999999876521 0 1124568899999999966654 6789
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecc---cCCceeeEEEEecCCCCEEEEecc-----------CceEEEEec
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSD-----------CGHLFIWKK 177 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~s~~~~~l~~~~~-----------dg~v~iwd~ 177 (312)
.+||..++ +. ..+... .....+..+++ +++|+++++... .+.|+.++.
T Consensus 76 ~~~d~~~g----------------~~-~~~~~~~~~~~~~~~~di~~-d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 76 CALNWKEQ----------------SA-VVLATVDNDKKNNRFNDGKV-DPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EEEETTTT----------------EE-EEEEECCTTCSSEEEEEEEE-CTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred EEEECCCC----------------cE-EEEEecCCCCCCCCCCCEEE-CCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 99998765 22 222211 11123788998 899997765422 235555554
Q ss_pred cCCeeEEEeecCccceEEEEEcCCCCeE-EEEeCCCcEEEccC--CCCCCC------CCCCChhhhhhhhccCCCCceeE
Q 021484 178 KGGKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAP--MPTDFP------PLPDNAEKIMKANKQGREDHSRI 248 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~ 248 (312)
. ++... +..+....+.++|+|+++.| ++.+.++.|.+|++ .++.+. .+.... ....-....+++.+.+
T Consensus 138 ~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~-~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 138 D-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEE-QIPDGMCIDAEGKLWV 214 (297)
T ss_dssp T-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGG-CEEEEEEEBTTSCEEE
T ss_pred C-CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCC-CCCCeeEECCCCCEEE
Confidence 3 33332 33334456899999999876 45556789999986 344321 111111 1112223456777888
Q ss_pred EecCCceEEEEEecccCccceeEee-cCCCccCCC-CCCCeEEEeecCCC
Q 021484 249 TLTPDVIMHVLRLQRRQTLAYRERR-YNAADFESD-EEEGETYLLGFSDS 296 (312)
Q Consensus 249 s~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~v~~~~~~~~ 296 (312)
+...++.|..|+..+......+... .....+... .+...+|+.....+
T Consensus 215 a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 8777888888886644333332221 122333333 34456777765443
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.18 E-value=1.9e-09 Score=91.80 Aligned_cols=157 Identities=11% Similarity=0.034 Sum_probs=101.4
Q ss_pred EEEcCCCCcEEEEEeCCC--eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEEecCCcEE
Q 021484 36 IVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYNDELVY 112 (312)
Q Consensus 36 ~~~~p~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~d~~i~ 112 (312)
++|+|++ +.|+++..++ .|.+++...+... .. ...........+.+++++| ++.++++..++.|+
T Consensus 176 ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~---------~~--~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~ 243 (409)
T 3hrp_A 176 PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAP---------TR--IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFG 243 (409)
T ss_dssp CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCE---------EE--EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEE
T ss_pred eeEecCC-CcEEEEecCCCceEEEEEcCCCcee---------EE--eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEE
Confidence 8999998 6777776655 7888887654310 00 0000011235567899999 55555544588999
Q ss_pred EEEcCCCcCCCCCcCCcccccCCCCCceE-----ecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 113 LFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 113 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
.||..++ . ...+ .+.....+...++| +| ++.++++-...+.|+.|+.... +..+
T Consensus 244 ~~d~~~~----------------~-~~~~~~~~~~g~~~~~P~~~ia~-~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~ 303 (409)
T 3hrp_A 244 RFNVKTQ----------------E-VTLIKQLELSGSLGTNPGPYLIY-YFVDSNFYMSDQNLSSVYKITPDGE--CEWF 303 (409)
T ss_dssp EEETTTC----------------C-EEEEEECCCCSCCCCSSCCEEEE-ETTTTEEEEEETTTTEEEEECTTCC--EEEE
T ss_pred EEECCCC----------------C-EEEEecccccCCCCCCccccEEE-eCCCCEEEEEeCCCCEEEEEecCCC--EEEE
Confidence 9998765 2 2222 11111111128999 78 4666677778899999997643 3333
Q ss_pred ecCc---------------cceEEEEEcCCCCeEEEEe-CCCcEEEccCCCCCC
Q 021484 187 VGDR---------------HVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDF 224 (312)
Q Consensus 187 ~~~~---------------~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~ 224 (312)
.++. .....++++|+|+++++-. .++.|+.|++..+.+
T Consensus 304 ~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 304 CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 3332 3478999999999888877 889999999766654
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=1.7e-08 Score=81.77 Aligned_cols=194 Identities=6% Similarity=0.047 Sum_probs=128.2
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-C
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-d 108 (312)
...+.++++++++ +++++...++.|..||.. ++.. ..........+..+++.++|.++++.. +
T Consensus 61 ~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~--------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 124 (300)
T 2qc5_A 61 DAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFT--------------EYPLPQPDSGPYGITEGLNGDIWFTQLNG 124 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE--------------EEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeE--------------EecCCCCCCCCccceECCCCCEEEEccCC
Confidence 3568899999988 677777668899999987 5421 001112235688999999999877764 7
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE-ee
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MV 187 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~ 187 (312)
+.|..++.. + +.. .+........+..+++ +++++++++...++.|..++. +++.... ..
T Consensus 125 ~~i~~~~~~-g----------------~~~-~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 184 (300)
T 2qc5_A 125 DRIGKLTAD-G----------------TIY-EYDLPNKGSYPAFITL-GSDNALWFTENQNNSIGRITN-TGKLEEYPLP 184 (300)
T ss_dssp TEEEEECTT-S----------------CEE-EEECSSTTCCEEEEEE-CTTSSEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CeEEEECCC-C----------------CEE-EccCCCCCCCceeEEE-CCCCCEEEEecCCCeEEEECC-CCcEEEeeCC
Confidence 899999876 3 222 2221111123788998 899997777777889999998 5654432 22
Q ss_pred cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCC--CCCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 188 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 188 ~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
.+...+..+++++++.++++....+.|.+|+. .+.... +......+ ......+++.+.++...++.|..++.
T Consensus 185 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 185 TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARP-HAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE-EEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCc-eEEEECCCCCEEEeccCCCeEEEECC
Confidence 33456889999999988777766788999998 333211 11111112 22234556667777766788888875
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=1.3e-09 Score=96.44 Aligned_cols=187 Identities=10% Similarity=0.021 Sum_probs=128.2
Q ss_pred CCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcC-
Q 021484 40 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKN- 117 (312)
Q Consensus 40 p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~- 117 (312)
|.+ .++++...+++|.++|..+++++. .+ . ....+..++|+|+|+++.++ .++.|.+||+.
T Consensus 165 ~~~-~~~V~~~~~~~V~viD~~t~~v~~--------------~i-~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 165 LEN-LFSVTLRDAGQIALIDGSTYEIKT--------------VL-D-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGG-EEEEEETTTTEEEEEETTTCCEEE--------------EE-E-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred CCc-eEEEEeCCCCeEEEEECCCCeEEE--------------EE-e-CCCCccceEECCCCCEEEEEcCCCeEEEEECCC
Confidence 433 566777789999999999887432 11 1 12346689999999977765 58999999995
Q ss_pred -CCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEec----CCCCEEEEecc-CceEEEEeccCCeeEEEeecC--
Q 021484 118 -MGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG----PNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVGD-- 189 (312)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s----~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~-- 189 (312)
+. +.+..+.... ....++| + |+|+++++++. ++.|.++|..+.+++..+...
T Consensus 228 ~t~----------------~~v~~i~~G~---~P~~ia~-s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~ 287 (567)
T 1qks_A 228 KEP----------------TTVAEIKIGS---EARSIET-SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM 287 (567)
T ss_dssp SSC----------------CEEEEEECCS---EEEEEEE-CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEE
T ss_pred CCC----------------cEeEEEecCC---CCceeEE-ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccc
Confidence 44 4445554322 2678998 7 69999887765 589999999999988877532
Q ss_pred --------c-cceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCCC---CCCCCChhhhhhhhccCCCCceeE-EecCCce
Q 021484 190 --------R-HVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDF---PPLPDNAEKIMKANKQGREDHSRI-TLTPDVI 255 (312)
Q Consensus 190 --------~-~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~ 255 (312)
. ..+..+..++++.. +++...+|.|.++|...... ..+. .........+.+++++++ +...++.
T Consensus 288 ~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~--~~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 288 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS--AERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE--CCSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee--ccccccCceECCCCCEEEEEeCCCCe
Confidence 1 26778888988776 44555679999999876431 1110 011112233667777665 4556789
Q ss_pred EEEEEecccC
Q 021484 256 MHVLRLQRRQ 265 (312)
Q Consensus 256 i~i~~~~~~~ 265 (312)
|.++|+.+..
T Consensus 366 V~ViD~~t~k 375 (567)
T 1qks_A 366 LVVIDTKEGK 375 (567)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999987654
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.17 E-value=6e-09 Score=86.05 Aligned_cols=189 Identities=11% Similarity=-0.004 Sum_probs=121.0
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEE
Q 021484 33 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVY 112 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~ 112 (312)
..+.+|+|+++.++++...++.|..||..+++.. .+ .....+.+++|+++|+++++..+ .|+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---------------~~--~~~~~v~~i~~~~dg~l~v~~~~-gl~ 112 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT---------------VH--ALPFMGSALAKISDSKQLIASDD-GLF 112 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---------------EE--ECSSCEEEEEEEETTEEEEEETT-EEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---------------EE--ECCCcceEEEEeCCCeEEEEECC-CEE
Confidence 4678999986578888888899999999877521 01 11356899999999998777644 499
Q ss_pred EEEcCCCcCCCCCcCCcccccCCCCCceEecc---cCCceeeEEEEecCCCCEEEEecc------CceEEEEeccCCeeE
Q 021484 113 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKKKGGKLV 183 (312)
Q Consensus 113 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~s~~~~~l~~~~~------dg~v~iwd~~~~~~~ 183 (312)
+||..++ +. ..+... .....+.++++ +++|+++++... .+.|..++ +++..
T Consensus 113 ~~d~~~g----------------~~-~~~~~~~~~~~~~~~~~i~~-d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 113 LRDTATG----------------VL-TLHAELESDLPGNRSNDGRM-HPSGALWIGTMGRKAETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp EEETTTC----------------CE-EEEECSSTTCTTEEEEEEEE-CTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred EEECCCC----------------cE-EEEeeCCCCCCCCCCCCEEE-CCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence 9998765 22 222211 11123788998 899987765432 25666666 46543
Q ss_pred EEeecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCC--CC-CCCC------CCCChhhhhhhhccCCCCceeEEecCC
Q 021484 184 RLMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPM--PT-DFPP------LPDNAEKIMKANKQGREDHSRITLTPD 253 (312)
Q Consensus 184 ~~~~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~--~~-~~~~------~~~~~~~~~~~~~~~~~~~~l~s~~~d 253 (312)
. +..+......++|+|+++.++.+ +.++.|.+|++. ++ .+.. +... ........+..++.+.++...+
T Consensus 173 ~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 173 K-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp E-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETT
T ss_pred E-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCC
Confidence 3 32233456789999999876544 467899999986 44 3211 1101 1111222344566777776666
Q ss_pred ceEEEEEe
Q 021484 254 VIMHVLRL 261 (312)
Q Consensus 254 ~~i~i~~~ 261 (312)
+.|..|+.
T Consensus 251 ~~v~~~d~ 258 (326)
T 2ghs_A 251 GAVDRYDT 258 (326)
T ss_dssp TEEEEECT
T ss_pred CEEEEECC
Confidence 77888875
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.14 E-value=1.2e-08 Score=83.01 Aligned_cols=162 Identities=8% Similarity=0.057 Sum_probs=105.0
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 108 (312)
...+.+++++|++ +++++ . ++.|.+||..+++.... ... ........+..++++|+|+++++. ..
T Consensus 53 ~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~----------~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 53 DAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVL----------ATV-DNDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp SSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEE----------EEC-CTTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred CCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEE----------Eec-CCCCCCCCCCCEEECCCCCEEEecCCc
Confidence 4568999999999 55544 3 57899999987763210 000 001123457889999999977764 22
Q ss_pred ---------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEE-EEeccCceEEEEec-
Q 021484 109 ---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKK- 177 (312)
Q Consensus 109 ---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l-~~~~~dg~v~iwd~- 177 (312)
..-.+|.+... .....+...... ...++| +|+++.| ++.+.++.|.+|++
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~----------------g~~~~~~~~~~~--pngi~~-spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPD----------------HHVKKYFDQVDI--SNGLDW-SLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTT----------------SCEEEEEEEESB--EEEEEE-CTTSCEEEEEEGGGTEEEEEEEC
T ss_pred ccccccccCCCcEEEEEECC----------------CCEEEEeecccc--ccceEE-cCCCCEEEEecCCCCcEEEEecc
Confidence 23355554432 122222222222 678999 9999876 45566889999987
Q ss_pred -cCCee-----EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 178 -KGGKL-----VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 178 -~~~~~-----~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.++.. ...+..+...+..++++++|++.++....+.|..||..++++
T Consensus 180 ~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 180 LQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp TTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred CCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 45543 222333345678999999999888887788999999986653
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.13 E-value=1.9e-08 Score=83.97 Aligned_cols=190 Identities=8% Similarity=-0.060 Sum_probs=117.5
Q ss_pred EEEcCCCCcEEEEEeC-----CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec---
Q 021484 36 IVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--- 107 (312)
Q Consensus 36 ~~~~p~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--- 107 (312)
....|++ +.+++... ++.|.+.|..+.+++. .+..+ ..+ . ++++|+|+.+..++
T Consensus 38 ~~~~pd~-~~vyV~~~~~~~~~~~V~ViD~~t~~v~~--------------~I~vG-~~P-~-va~spDG~~lyVan~~~ 99 (386)
T 3sjl_D 38 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGRVIG--------------MIDGG-FLP-N-PVVADDGSFIAHASTVF 99 (386)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTEEEE--------------EEEEC-SSC-E-EEECTTSSCEEEEEEEE
T ss_pred eccCCCC-CEEEEEcCcccCCCCEEEEEECCCCeEEE--------------EEECC-CCC-c-EEECCCCCEEEEEcccc
Confidence 4456888 45555443 6899999999988432 22122 223 4 99999998554432
Q ss_pred --------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC-----CceeeEEEEecCCCCEEEEecc--CceE
Q 021484 108 --------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-----SQTVKGVNFFGPNDEYVMSGSD--CGHL 172 (312)
Q Consensus 108 --------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~s~~~~~l~~~~~--dg~v 172 (312)
++.|.+||..+. +.+..+..... ......+.+ +|+|++++++.. ++.|
T Consensus 100 ~r~~~G~~~~~VsviD~~t~----------------~v~~~I~v~~g~r~~~g~~P~~~a~-spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTL----------------LPTADIELPDAPRFLVGTYPWMTSL-TPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EETTEEEEEEEEEEECTTTC----------------CEEEEEEETTCCCCCBSCCGGGEEE-CTTSSEEEEEECSSSCEE
T ss_pred cccccCCCCCEEEEEECCCC----------------eEEEEEECCCccccccCCCCceEEE-cCCCCEEEEEEcCCCCeE
Confidence 578999999887 55555542210 012567888 999999988864 6899
Q ss_pred EEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC-CCC-----CCCCCChhhhhhhhcc-CCCCc
Q 021484 173 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDF-----PPLPDNAEKIMKANKQ-GREDH 245 (312)
Q Consensus 173 ~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~~-----~~~~~~~~~~~~~~~~-~~~~~ 245 (312)
.++|+.+++.+.++.... . ...+....+.+++.+.||++.+.++.. +++ ..+......+.....+ .++++
T Consensus 163 sVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp EEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 999999999998886432 1 122322344566777788888888765 443 1111111111111111 23454
Q ss_pred eeEEecCCceEEEEEeccc
Q 021484 246 SRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 246 ~l~s~~~d~~i~i~~~~~~ 264 (312)
+++ .+.++.+.+.|+...
T Consensus 240 ~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 240 LVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp EEE-EBTTSEEEEEECTTS
T ss_pred EEE-EeCCCEEEEEECCCC
Confidence 444 555789999998654
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=2.3e-09 Score=98.47 Aligned_cols=219 Identities=6% Similarity=-0.083 Sum_probs=124.9
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCC--------------eEEEEEccCCeec
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE--------------YARVYDIRKCHWY 66 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg--------------~i~iwd~~~~~~~ 66 (312)
|++||+.+.+.... ... ...+..++|+|+ . .|+.++.++ .|++|++.+++..
T Consensus 191 i~v~dl~tg~~~~~-~~~-----------~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 256 (741)
T 1yr2_A 191 VKFVGVADGKPLAD-ELK-----------WVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA 256 (741)
T ss_dssp EEEEETTTCCEEEE-EEE-----------EEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGG
T ss_pred EEEEECCCCCCCCc-cCC-----------CceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchh
Confidence 46788877654322 111 112357899998 4 444444443 3888998766410
Q ss_pred CCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCC-----cEEEEEcCCCcCCCCCcCCcccccCCCC-Cc
Q 021484 67 SPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE-----LVYLFEKNMGLGPSPLSLSPEDLQKREE-PQ 139 (312)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (312)
.. ..... ..+...+..+.|+|+|++|+.. .++ .|++||+.++. .. ..
T Consensus 257 -------~~---lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~---------------~~~~~ 310 (741)
T 1yr2_A 257 -------DQ---PVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK---------------IGPVT 310 (741)
T ss_dssp -------CE---EEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE---------------ECCCE
T ss_pred -------CE---EEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC---------------CcccE
Confidence 00 00000 2233358899999999977664 333 79999987641 12 45
Q ss_pred eEecccCCceeeEEEEecCCCCEEEEecc----CceEEEEeccCC--eeEEEeecCccceEEEEEcCCCCeEEEEeCCCc
Q 021484 140 VYSGHRNSQTVKGVNFFGPNDEYVMSGSD----CGHLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKT 213 (312)
Q Consensus 140 ~~~~~~~~~~v~~v~~~s~~~~~l~~~~~----dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~ 213 (312)
.+..+... +... + +++++.|+..+. .+.|.+||+.++ +....+..+...+..+.|+ .+.++++...|+.
T Consensus 311 ~l~~~~~~--~~~~-~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 311 ALIPDLKA--QWDF-V-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK 385 (741)
T ss_dssp EEECSSSS--CEEE-E-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE
T ss_pred EecCCCCc--eEEE-E-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 55555433 4444 3 467887776665 456999999874 4444445555567778887 5566888888988
Q ss_pred EEEccCC--CCCCCCCCCChhhhhhhhccCCCCceeE-E---ecCCceEEEEEeccc
Q 021484 214 VKLWAPM--PTDFPPLPDNAEKIMKANKQGREDHSRI-T---LTPDVIMHVLRLQRR 264 (312)
Q Consensus 214 i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s---~~~d~~i~i~~~~~~ 264 (312)
.+||.+. ++....+.......+....+++++..++ + ....+.++.||+.++
T Consensus 386 ~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 386 SQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 7777543 3333333211111122223445554443 3 334478888887654
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.07 E-value=3.1e-08 Score=81.74 Aligned_cols=155 Identities=9% Similarity=-0.021 Sum_probs=100.6
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccccccccc-CCCccEEEEEEccCCCeEEEec-C
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYN-D 108 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~-d 108 (312)
..+.+++|+|++ +++++. . ..|.+||..+++.... . .... .....+..++++|+|+++++.. +
T Consensus 90 ~~v~~i~~~~dg-~l~v~~-~-~gl~~~d~~~g~~~~~----------~--~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 90 FMGSALAKISDS-KQLIAS-D-DGLFLRDTATGVLTLH----------A--ELESDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp SCEEEEEEEETT-EEEEEE-T-TEEEEEETTTCCEEEE----------E--CSSTTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred CcceEEEEeCCC-eEEEEE-C-CCEEEEECCCCcEEEE----------e--eCCCCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 468999999998 666554 4 4599999887753110 0 0000 1124588999999999777653 2
Q ss_pred ------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEE-EeccCceEEEEecc--C
Q 021484 109 ------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWKKK--G 179 (312)
Q Consensus 109 ------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~-~~~~dg~v~iwd~~--~ 179 (312)
+.|+.++ ++ +. ..+...... ...++| +++++.|+ +.+.++.|.+|++. +
T Consensus 155 ~~~~~~~~l~~~~--~g----------------~~-~~~~~~~~~--~~~i~~-s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 155 KAETGAGSIYHVA--KG----------------KV-TKLFADISI--PNSICF-SPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp TCCTTCEEEEEEE--TT----------------EE-EEEEEEESS--EEEEEE-CTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred cCCCCceEEEEEe--CC----------------cE-EEeeCCCcc--cCCeEE-cCCCCEEEEEECCCCEEEEEEccccc
Confidence 4566666 33 22 222222222 678998 99998765 44567899999986 5
Q ss_pred C-e-----eEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCC
Q 021484 180 G-K-----LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 180 ~-~-----~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
+ + ....+......+..++++++|.+.++...++.|..|+..+.
T Consensus 213 Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 213 GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 5 3 22233333456788999999998877767789999998543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.07 E-value=1.6e-09 Score=98.83 Aligned_cols=198 Identities=9% Similarity=0.105 Sum_probs=118.5
Q ss_pred CCccceEEEEEcCCCCcEEEE-E----eCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCe
Q 021484 28 MNSIRLNAIVIDPRNPNYFAV-G----GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 102 (312)
Q Consensus 28 ~h~~~v~~~~~~p~~~~~l~~-~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 102 (312)
+|...+..++|||++ ++||- . +....|++||+.+++.. ...+ . ......++|+ |++.
T Consensus 126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~-------------~~~~-~--~~k~~~~~Ws-Dg~~ 187 (693)
T 3iuj_A 126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPL-------------ETPL-K--DVKFSGISWL-GNEG 187 (693)
T ss_dssp TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEE-------------EEEE-E--EEESCCCEEE-TTTE
T ss_pred CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCC-------------cccc-C--CceeccEEEe-CCCE
Confidence 456678999999999 56653 2 23357999999988731 0011 1 0112467899 9986
Q ss_pred EEEe-cCC-------------cEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc-CCceeeEEEEecCCCCEEEEec
Q 021484 103 LISY-NDE-------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-NSQTVKGVNFFGPNDEYVMSGS 167 (312)
Q Consensus 103 l~s~-~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~s~~~~~l~~~~ 167 (312)
|+.+ .+. .|++|++.+... +....+.... .......+.| +|++++|+...
T Consensus 188 l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--------------~~~~v~~~~~~~~~~~~~~~~-SpDg~~l~~~~ 252 (693)
T 3iuj_A 188 FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE--------------DDRLVFGAIPAQHHRYVGATV-TEDDRFLLISA 252 (693)
T ss_dssp EEEEESSCCC-------CCCCEEEEEETTSCGG--------------GCEEEESCSGGGCCSEEEEEE-CTTSCEEEEEE
T ss_pred EEEEEecCcccccccccCCCcEEEEEECCCCcc--------------cceEEEecCCCCCeEEEEEEE-cCCCCEEEEEE
Confidence 6664 443 399999876510 1122232221 1223678888 99999886443
Q ss_pred c----CceEEEEeccCCe-eEEEeecCccceEEEEEcCCCCeEE-EEeCC---CcEEEccCCCCCC---CCCCCChhhhh
Q 021484 168 D----CGHLFIWKKKGGK-LVRLMVGDRHVVNQLEPHPHIPMFA-TCGIE---KTVKLWAPMPTDF---PPLPDNAEKIM 235 (312)
Q Consensus 168 ~----dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~-t~~~d---~~i~iwd~~~~~~---~~~~~~~~~~~ 235 (312)
. ...|+++|+.++. ....+..+....... |++++..|+ ....+ +.|..+++.+... ..+..+...++
T Consensus 253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 331 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL 331 (693)
T ss_dssp ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE
Confidence 2 3589999987763 344555565555554 666666644 44433 5789999887643 33333444443
Q ss_pred hhhccCCCCceeEEe-cCCc--eEEEEEec
Q 021484 236 KANKQGREDHSRITL-TPDV--IMHVLRLQ 262 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~-~~d~--~i~i~~~~ 262 (312)
.+++++..++.. ..++ .|++|++.
T Consensus 332 ---~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 332 ---TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp ---EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ---EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 455655555544 4444 56777765
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.05 E-value=7.7e-11 Score=99.11 Aligned_cols=180 Identities=9% Similarity=0.042 Sum_probs=91.9
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGP 122 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~ 122 (312)
..+++++.|+.|+.||..+++....... ..+.+..+..++.+++++ .|+.|+.||..++
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG--- 69 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE-----------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN--- 69 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC-----------------CCSCCCC-----CCEEECTTTCCEEEC--------
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC-----------------CCceecceEcCCCEEEEeCCCCEEEEEECCCC---
Confidence 5889999999999999999985432111 122233344567677764 6999999999877
Q ss_pred CCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCC
Q 021484 123 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 202 (312)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~ 202 (312)
+.+..+..+... .+.+.-. -..+..+++++.++.|+.||..+|+.+..+..+. ...++|++
T Consensus 70 -------------~~~w~~~~~~~~-~~~~sp~-~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~ 130 (369)
T 2hz6_A 70 -------------EGLTKLPFTIPE-LVQASPC-RSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPST 130 (369)
T ss_dssp -------------CCSEECSCCHHH-HHTTCSC-C-----CCCCEEEEEEEEECCC------------------------
T ss_pred -------------ceeeeeeccCcc-ccccCce-EecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccC
Confidence 444444322110 0111000 1135567888899999999999999887766543 24567788
Q ss_pred CeEEEEeCCCcEEEccCCCCCCC-CCCCChhhhhhhhccCCC---CceeEEecCCceEEEEEecccC
Q 021484 203 PMFATCGIEKTVKLWAPMPTDFP-PLPDNAEKIMKANKQGRE---DHSRITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 203 ~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~i~i~~~~~~~ 265 (312)
..+++++.|+.|+.||.++++.. .+.... . .......+ ...++.++.++.++.||..++.
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~-~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTRELRWNATYFD--Y-AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp --EEEEEEEEEEECCCSSSSSCCCEEEEEE--E-CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred CEEEEEecCCEEEEEECCCCCEEEeEeccc--c-cCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 88999999999999999887642 221110 0 11111111 1467778889999999987663
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=2.3e-08 Score=81.70 Aligned_cols=153 Identities=10% Similarity=0.021 Sum_probs=105.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCc
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~ 110 (312)
......|+|++..+++++..++.|..|+. +++. ..+ ..+...+..++++++|+++++. .++.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---------------~~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---------------DVL-LDATAFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---------------EEE-EESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---------------EEE-eCCCCccceeeECCCCCEEEEECCCCE
Confidence 46789999998447888888999999987 3431 011 2234568899999999977776 4688
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC---CceeeEEEEecCCCCEEEE----ecc-------------Cc
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMS----GSD-------------CG 170 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~v~~~s~~~~~l~~----~~~-------------dg 170 (312)
|.+|+.. + +. ..+..... ...+..+++ +++|+++++ |.. .+
T Consensus 109 v~~~~~~-g----------------~~-~~~~~~~~~~~~~~~~~i~~-d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 109 ITRSDAD-G----------------QA-HLLVGRYAGKRLNSPNDLIV-ARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EEEECTT-S----------------CE-EEEECEETTEECSCCCCEEE-CTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred EEEECCC-C----------------CE-EEEEeccCCCccCCCCCEEE-CCCCCEEEeCcCCCccccccccccccccCCC
Confidence 9999875 3 21 22211111 012678998 899998886 432 35
Q ss_pred eEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC------CcEEEccCCCC
Q 021484 171 HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE------KTVKLWAPMPT 222 (312)
Q Consensus 171 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d------~~i~iwd~~~~ 222 (312)
.|+.+|..+++..... .......++|+|+++.|+.+... +.|.+|++...
T Consensus 170 ~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred eEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 7888888777654333 33456889999999987776654 78999998653
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.04 E-value=1.2e-08 Score=92.94 Aligned_cols=217 Identities=8% Similarity=0.008 Sum_probs=122.6
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCC-------------eEEEEEccCCeecC
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE-------------YARVYDIRKCHWYS 67 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg-------------~i~iwd~~~~~~~~ 67 (312)
|++||+.+.+.... ... ......++|+ ++ +.|+.++.+. .|++|++.+.+..
T Consensus 157 i~v~dl~tg~~~~~-~~~-----------~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~- 221 (693)
T 3iuj_A 157 IHLMDVESKQPLET-PLK-----------DVKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED- 221 (693)
T ss_dssp EEEEETTTCSEEEE-EEE-----------EEESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGG-
T ss_pred EEEEECCCCCCCcc-ccC-----------CceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCccc-
Confidence 46788877653322 111 1113578899 88 6666666553 4999998866410
Q ss_pred CCCCCCCcccccccccccC-CCccEEEEEEccCCCeEEE-ec----CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceE
Q 021484 68 PISSDTPVDTFCPRHLIGK-NNIHITGLAYSNTSELLIS-YN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 141 (312)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s-~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (312)
.. ..... .. |......+.|+|+|++|+. .. ...|+++|+.++. .....+
T Consensus 222 ------~~---~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~---------------~~~~~l 276 (693)
T 3iuj_A 222 ------DR---LVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN---------------APLLTV 276 (693)
T ss_dssp ------CE---EEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT---------------CCCEEE
T ss_pred ------ce---EEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC---------------CceEEE
Confidence 00 01000 22 3445788999999996654 22 2589999997651 244555
Q ss_pred ecccCCceeeEEEEecCCCCEE-EEeccC---ceEEEEeccCCee--EEEeecCccceEEEEEcCCCCeEEEEeC-CC--
Q 021484 142 SGHRNSQTVKGVNFFGPNDEYV-MSGSDC---GHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFATCGI-EK-- 212 (312)
Q Consensus 142 ~~~~~~~~v~~v~~~s~~~~~l-~~~~~d---g~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~~~~l~t~~~-d~-- 212 (312)
..+... .... + ++++..| +....+ +.|..+++.++.. ...+..|...+. .|+|+++.|+.... ++
T Consensus 277 ~~~~~~--~~~~-~-~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~ 350 (693)
T 3iuj_A 277 QGDLDA--DVSL-V-DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATA 350 (693)
T ss_dssp ECSSSS--CEEE-E-EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEE
T ss_pred eCCCCc--eEEE-E-eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCee
Confidence 555543 4443 4 4455544 444443 6899999987654 345555665554 88999998776664 43
Q ss_pred cEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCc-eeEEecC---CceEEEEEeccc
Q 021484 213 TVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDH-SRITLTP---DVIMHVLRLQRR 264 (312)
Q Consensus 213 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~l~s~~~---d~~i~i~~~~~~ 264 (312)
.|++|++.++....+.- ....+ ......+++. ++++.+. -+.+..+++...
T Consensus 351 ~l~~~d~~g~~~~~l~~p~~~~~-~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 351 RVEQFDYEGKRVREVALPGLGSV-SGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEECTTSCEEEEECCSSSSEE-EECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEEEECCCCeeEEeecCCCceE-EeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 68999988664332221 11112 1112333433 3333332 267777776544
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.97 E-value=4.5e-07 Score=76.16 Aligned_cols=230 Identities=10% Similarity=-0.048 Sum_probs=128.7
Q ss_pred EEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE
Q 021484 35 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 104 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 104 (312)
.++++|++ +.++++. .++.|.+||..+.+....+..+.+ ... . +......++|+|+|++|+
T Consensus 70 ~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~------~~~-~-~g~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 70 NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA------PRF-D-VGPYSWMNANTPNNADLL 140 (373)
T ss_pred CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc------ccc-c-cCCCccceEECCCCCEEE
Confidence 89999999 5666654 367899999988764332211100 000 0 012345889999999777
Q ss_pred Ee--c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCce-EecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCC
Q 021484 105 SY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 180 (312)
Q Consensus 105 s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~ 180 (312)
.+ . ++.|.++| .++ +.... +... .++.+.....+.+++.+.||.+.++|. ++
T Consensus 141 v~n~~~~~~v~viD-~t~----------------~~~~~~i~~~------~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGG----------------SSDDQLLSSP------TCYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred EEecCCCCeEEEEE-CCC----------------CEEeEEcCCC------ceEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 64 3 57899999 876 44444 3211 123331333355667778999999999 88
Q ss_pred eeEEEee-----cCccce-EEEEEcCCCCeEEEEeCCCcEEEccCCCCCCC---CCCCChh---------hhhhhhccCC
Q 021484 181 KLVRLMV-----GDRHVV-NQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP---PLPDNAE---------KIMKANKQGR 242 (312)
Q Consensus 181 ~~~~~~~-----~~~~~v-~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~---~~~~~~~---------~~~~~~~~~~ 242 (312)
+.+.... ....++ ....+.+++..++..+.++.+.+.|+.+.... .+.-... .-......++
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 7663322 111221 23456666665444457789999998765321 1110000 0001122345
Q ss_pred CCceeEEec----------CCceEEEEEecccCccce---------eEeecCCC-ccCCCC-CCCeEEEeecCCCC
Q 021484 243 EDHSRITLT----------PDVIMHVLRLQRRQTLAY---------RERRYNAA-DFESDE-EEGETYLLGFSDSD 297 (312)
Q Consensus 243 ~~~~l~s~~----------~d~~i~i~~~~~~~~~~~---------~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~ 297 (312)
++..+.... .++.|.++|..+...... +.+++++. .+.... .++.|.++|...+.
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 544444432 235788888766543222 24555555 343333 46678888876655
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.97 E-value=4.2e-08 Score=81.85 Aligned_cols=157 Identities=10% Similarity=-0.033 Sum_probs=95.9
Q ss_pred EEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE
Q 021484 35 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 104 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 104 (312)
.++++|++ +.++++. .++.|.+||..+.+....+..+.. ... ........++++|+|+++.
T Consensus 82 ~va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g------~r~--~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 82 NPVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA------PRF--LVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC------CCC--CBSCCGGGEEECTTSSEEE
T ss_pred cEEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc------ccc--ccCCCCceEEEcCCCCEEE
Confidence 39999999 5554443 367899999998874322210000 000 0012344689999999665
Q ss_pred Ee--c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccC-C
Q 021484 105 SY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-G 180 (312)
Q Consensus 105 s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~-~ 180 (312)
.+ . ++.|.++|+.++ +.+..+.... . ...+ +...+.+++.+.||.+.+.++.+ +
T Consensus 153 Van~~~~~~VsVID~~t~----------------~vv~tI~v~g----~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLEGK----------------AFKRMLDVPD----C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp EEECSSSCEEEEEETTTT----------------EEEEEEECCS----E-EEEE-EEETTEEEEEETTSCEEEEECCSSS
T ss_pred EEEcCCCCeEEEEECCCC----------------cEEEEEECCC----c-ceee-cCCCceeEEECCCCCEEEEECCCCC
Confidence 54 3 689999999887 5666654321 1 2233 44556777888899999998876 5
Q ss_pred eeEEEeecC----ccce-EEEEEc-CCCCeEEEEeCCCcEEEccCCCCC
Q 021484 181 KLVRLMVGD----RHVV-NQLEPH-PHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 181 ~~~~~~~~~----~~~v-~~~~~~-p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+.......+ ..++ ....|. ++|+++. .+.+|+|.+.|+.+..
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred eEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 543322111 1122 124554 6775544 5568999999998765
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=5.1e-09 Score=87.10 Aligned_cols=182 Identities=12% Similarity=0.102 Sum_probs=105.6
Q ss_pred CccceEEEEEcCCCCcEEEEEeC-----CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCC-Ce
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 102 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~ 102 (312)
|-..+..+++++++ +++++-.. ++.|.+||+.++++...+..+.. . ..+...+..+++++++ .+
T Consensus 65 ~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~--------~-~~~~~~~~~v~vd~~~g~~ 134 (343)
T 2qe8_A 65 TFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP--------I-TLSNSFVNDLAVDLIHNFV 134 (343)
T ss_dssp CCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT--------T-SCTTCCCCEEEEETTTTEE
T ss_pred ceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh--------h-cccccccceEEEecCCCEE
Confidence 56789999999998 66666543 58999999998874322211100 0 1223456789999864 44
Q ss_pred EEE-e---cCCcEEEEEcCCCcCC--CC--CcCCccc---ccCCCCCceEec------ccCCceeeEEEEecCCCCEEEE
Q 021484 103 LIS-Y---NDELVYLFEKNMGLGP--SP--LSLSPED---LQKREEPQVYSG------HRNSQTVKGVNFFGPNDEYVMS 165 (312)
Q Consensus 103 l~s-~---~d~~i~iwd~~~~~~~--~~--~~~~~~~---~~~~~~~~~~~~------~~~~~~v~~v~~~s~~~~~l~~ 165 (312)
+++ . .++.|.+||+.++... .. ..+.... ............ ... .+..++| +|+++.|+.
T Consensus 135 yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~--~~~gia~-s~dg~~ly~ 211 (343)
T 2qe8_A 135 YISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL--GVNGIVL-DAENEWLYL 211 (343)
T ss_dssp EEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC--CEEEEEE-CTTSCEEEE
T ss_pred EEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec--ccceeEe-ccCCCEEEE
Confidence 455 3 4788999998765200 00 0000000 000000000000 011 2678999 999998887
Q ss_pred eccCc-eEEEEecc---CCe-----eEE--EeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 166 GSDCG-HLFIWKKK---GGK-----LVR--LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 166 ~~~dg-~v~iwd~~---~~~-----~~~--~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
+...+ .++.++.. .+. ... ...++......++++++|.++++...++.|.+||..+++
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 76655 56655532 111 000 111233456679999999999998889999999984443
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.93 E-value=7.7e-07 Score=74.70 Aligned_cols=146 Identities=9% Similarity=-0.062 Sum_probs=96.3
Q ss_pred EEcCCCCcEEEEEeC--CC---eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec----
Q 021484 37 VIDPRNPNYFAVGGS--DE---YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN---- 107 (312)
Q Consensus 37 ~~~p~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~---- 107 (312)
...|++ +.+++... .. .|.++|..++++... +..+ ..+ .++++|+|+.+..+.
T Consensus 27 ~~~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~--------------i~~g-~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 27 APGADG-RRSYINLPAHHSAIIQQWVLDAGSGSILGH--------------VNGG-FLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred cCCCCC-CEEEEeCCcccCCccEEEEEECCCCeEEEE--------------ecCC-CCC--CeEECCCCCEEEEEecccc
Confidence 344666 55555542 33 889999998874321 1111 222 899999999666652
Q ss_pred -------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc--cC---CceeeEEEEecCCCCEEEEecc--CceEE
Q 021484 108 -------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RN---SQTVKGVNFFGPNDEYVMSGSD--CGHLF 173 (312)
Q Consensus 108 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~v~~v~~~s~~~~~l~~~~~--dg~v~ 173 (312)
++.|.+||..+. +.+..+... .. ......+.+ +|+|++|++++. ++.|.
T Consensus 89 ~~~rg~~~~~v~viD~~t~----------------~~~~~i~~~~~~~~~~g~~p~~~~~-spDG~~l~v~n~~~~~~v~ 151 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTF----------------LPIADIELPDAPRFDVGPYSWMNAN-TPNNADLLFFQFAAGPAVG 151 (373)
T ss_pred ccccCCCCCeEEEEECCCC----------------cEEEEEECCCccccccCCCccceEE-CCCCCEEEEEecCCCCeEE
Confidence 567999999775 444443321 00 011457888 999999998874 57899
Q ss_pred EEeccCCeeEEE-eecCccceEEEEEcCCCC-eEEEEeCCCcEEEccCCCCC
Q 021484 174 IWKKKGGKLVRL-MVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 174 iwd~~~~~~~~~-~~~~~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~ 223 (312)
++| .+++.+.. +... . ++.+.|.++ .+++.+.||.+.+++. +++
T Consensus 152 viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 152 LVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred EEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 999 99998877 6532 2 244556654 4667778999999999 654
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.89 E-value=1.4e-07 Score=77.04 Aligned_cols=187 Identities=9% Similarity=0.041 Sum_probs=110.5
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE----
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS---- 105 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s---- 105 (312)
...+..+++++++ +++++...++.|..|+.. ++.. .+. ..........+..+++.++|.++++
T Consensus 85 ~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~----------~~~-~~~~~~~~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 85 TAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAH----------LLV-GRYAGKRLNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp CSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------EEE-CEETTEECSCCCCEEECTTSCEEEECCSG
T ss_pred CCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEE----------EEE-eccCCCccCCCCCEEECCCCCEEEeCcCC
Confidence 4568899999998 677666667889999975 4321 000 0000111234667999999998886
Q ss_pred ec--------------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC--
Q 021484 106 YN--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-- 169 (312)
Q Consensus 106 ~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d-- 169 (312)
+. .+.|+.||..++ +.. .+. .... ...++| +|+++.|+.+...
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g----------------~~~-~~~-~~~~--p~gl~~-spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGS----------------PLQ-RMA-DLDH--PNGLAF-SPDEQTLYVSQTPEQ 210 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSC----------------CCE-EEE-EESS--EEEEEE-CTTSSEEEEEECCC-
T ss_pred CccccccccccccccCCCeEEEEcCCCC----------------cEE-EEe-cCCC--CcceEE-cCCCCEEEEEecCCc
Confidence 21 245777776554 232 222 2222 678999 9999988777654
Q ss_pred ----ceEEEEeccCCeeE--EEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCC
Q 021484 170 ----GHLFIWKKKGGKLV--RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR 242 (312)
Q Consensus 170 ----g~v~iwd~~~~~~~--~~~-~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
+.|++|++..+... ..+ ......+..++++++|++.++. .+ .|.+|+.....+..+.... .+ ....+.+
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~g~~~~~~~~~~-~~-~~~~f~~ 286 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSDGQLLGHIPTPG-TA-SNCTFDQ 286 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTTSCEEEEEECSS-CC-CEEEECT
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCCCCEEEEEECCC-ce-eEEEEeC
Confidence 78999998765411 111 1123345678999999965554 44 5999998655433332111 12 2222335
Q ss_pred CCceeEEecCCc
Q 021484 243 EDHSRITLTPDV 254 (312)
Q Consensus 243 ~~~~l~s~~~d~ 254 (312)
++..|...+.++
T Consensus 287 d~~~L~it~~~~ 298 (305)
T 3dr2_A 287 AQQRLFITGGPC 298 (305)
T ss_dssp TSCEEEEEETTE
T ss_pred CCCEEEEEcCCe
Confidence 554555444443
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=1.4e-06 Score=73.47 Aligned_cols=158 Identities=8% Similarity=0.082 Sum_probs=103.9
Q ss_pred eEEEEEcCCCCcEEEEEeCC------CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 33 LNAIVIDPRNPNYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
-..+...|++ +++++..+ +.|.++|..+.+++..+..+. ....--..+.|+|+++.++++
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~------------~~~~~~Yd~~~~p~~~~mvsS 205 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR------------GDQYLAYDFWWNLPNEVLVSS 205 (462)
T ss_dssp EEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC------------TTCCCCCCEEEETTTTEEEEC
T ss_pred ccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC------------CCccccceEEECCCCCEEEEc
Confidence 4567788987 55555444 789999999888554332110 111123357889999988887
Q ss_pred c--------------------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE-ecCCCCEEEE
Q 021484 107 N--------------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMS 165 (312)
Q Consensus 107 ~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-~s~~~~~l~~ 165 (312)
. ..+|.+||+.++ +..+++...........+.| ++|+++++++
T Consensus 206 ~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~----------------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 206 EWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR----------------KRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp BCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT----------------EEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred cCcCccccccccchhhhhhccCCEEEEEECCCC----------------cEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 4 789999999876 56666654211122445544 4899999887
Q ss_pred ec------cCceEEEEeccCCeeE--EEe--ecC----------------ccceEEEEEcCCCCeEEEEe-CCCcEEEcc
Q 021484 166 GS------DCGHLFIWKKKGGKLV--RLM--VGD----------------RHVVNQLEPHPHIPMFATCG-IEKTVKLWA 218 (312)
Q Consensus 166 ~~------~dg~v~iwd~~~~~~~--~~~--~~~----------------~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd 218 (312)
++ .+++|.+|....++.. ..+ ... ...+..+.++|++++|.++. ..+.|.+||
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYD 349 (462)
T ss_dssp EEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 76 4668888776655321 111 110 13467899999999977766 578999999
Q ss_pred CC
Q 021484 219 PM 220 (312)
Q Consensus 219 ~~ 220 (312)
+.
T Consensus 350 V~ 351 (462)
T 2ece_A 350 IS 351 (462)
T ss_dssp CS
T ss_pred ec
Confidence 85
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=9.6e-07 Score=74.51 Aligned_cols=202 Identities=10% Similarity=0.089 Sum_probs=121.2
Q ss_pred CCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccC-CCccEEEEEEccCCCeEEEe-cC------CcE
Q 021484 40 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK-NNIHITGLAYSNTSELLISY-ND------ELV 111 (312)
Q Consensus 40 p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~-~d------~~i 111 (312)
++...+++.+..+++|.++|+.+..- .+..+....+..+... .......+...|+| +++++ .+ +.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~-----~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPR-----EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTT-----SCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCC-----CceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 77756777788899999999975410 0001111111111111 11245667888999 66664 34 689
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC-ceeeEEEEecCCCCEEEEec-------------------cCce
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-QTVKGVNFFGPNDEYVMSGS-------------------DCGH 171 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~~s~~~~~l~~~~-------------------~dg~ 171 (312)
.++|..+. +.+..+...... ..-..+-| +|+++.+++.. .+.+
T Consensus 167 ~vlD~~T~----------------~v~~~~~~~~~~~~~~Yd~~~-~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 167 LMLDHYSF----------------EPLGKWEIDRGDQYLAYDFWW-NLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp EEECTTTC----------------CEEEECCSBCTTCCCCCCEEE-ETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred EEEECCCC----------------eEEEEEccCCCCccccceEEE-CCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 99999876 555555422211 11335666 89999888874 3789
Q ss_pred EEEEeccCCeeEEEeecC-c-cceEEEEE--cCCCCeEEEEe------CCCcEEEccCCCCC-------------C-CCC
Q 021484 172 LFIWKKKGGKLVRLMVGD-R-HVVNQLEP--HPHIPMFATCG------IEKTVKLWAPMPTD-------------F-PPL 227 (312)
Q Consensus 172 v~iwd~~~~~~~~~~~~~-~-~~v~~~~~--~p~~~~l~t~~------~d~~i~iwd~~~~~-------------~-~~~ 227 (312)
|.+||+.+++.+.++... . .....+.| +|+++++..++ .+++|.+|....+. . ..+
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSC
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccc
Confidence 999999999888888653 1 23445555 99999955555 56788765543221 1 011
Q ss_pred CCCh------hhhhhhhccCCCCceeE-EecCCceEEEEEeccc
Q 021484 228 PDNA------EKIMKANKQGREDHSRI-TLTPDVIMHVLRLQRR 264 (312)
Q Consensus 228 ~~~~------~~~~~~~~~~~~~~~l~-s~~~d~~i~i~~~~~~ 264 (312)
+... .........++++++|. +.-..+.|.++++...
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 1000 11223344667776664 5555689999998643
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.86 E-value=3.9e-07 Score=72.06 Aligned_cols=195 Identities=10% Similarity=0.062 Sum_probs=124.1
Q ss_pred ceEEEEEcCCCCcEEEEEeC--CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC
Q 021484 32 RLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 108 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 108 (312)
....+.|+|++ .++++.+. ++.|++.|+.+++...... +.. ......+++.. +++.++. .+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-------------l~~-~~fgeGi~~~g-~~lyv~t~~~ 85 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHK-------------MDD-SYFGEGLTLLN-EKLYQVVWLK 85 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEE-------------CCT-TCCEEEEEEET-TEEEEEETTC
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEe-------------cCC-CcceEEEEEeC-CEEEEEEecC
Confidence 36799999986 66665543 6899999999998532211 011 11223455542 2344444 59
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 188 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 188 (312)
+.+.++|..+. +.+..+...... -..+ +++++.++++..++.|.++|..+.+.+..+..
T Consensus 86 ~~v~viD~~t~----------------~v~~~i~~g~~~--g~gl---t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 86 NIGFIYDRRTL----------------SNIKNFTHQMKD--GWGL---ATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SEEEEEETTTT----------------EEEEEEECCSSS--CCEE---EECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEECCCC----------------cEEEEEECCCCC--eEEE---EECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 99999999877 566666533111 2334 44677777777889999999999988887763
Q ss_pred Cc-----cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCCh--h----------hhhhhhccCCC-CceeEE
Q 021484 189 DR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA--E----------KIMKANKQGRE-DHSRIT 249 (312)
Q Consensus 189 ~~-----~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~--~----------~~~~~~~~~~~-~~~l~s 249 (312)
.. ..++.+.|. ++..++....++.|.+.|+.++++ ..+.-.. . .+..-..+.++ .+++++
T Consensus 145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 21 136788888 666566665788999999999874 2222110 0 01122234443 467777
Q ss_pred ecCCceEEEEEeccc
Q 021484 250 LTPDVIMHVLRLQRR 264 (312)
Q Consensus 250 ~~~d~~i~i~~~~~~ 264 (312)
+.....+.+.++...
T Consensus 224 gk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 224 GKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTCSEEEEEEEEEC
T ss_pred CCCCCeEEEEEEecc
Confidence 778888888877654
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.86 E-value=2.8e-07 Score=78.21 Aligned_cols=174 Identities=7% Similarity=-0.068 Sum_probs=106.1
Q ss_pred CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-----------cCCcEEEEEcCCCcC
Q 021484 53 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-----------NDELVYLFEKNMGLG 121 (312)
Q Consensus 53 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-----------~d~~i~iwd~~~~~~ 121 (312)
+.|.++|..+.+++.. +..+ ..+ .++++|+|+.+..+ .++.|.++|..+.
T Consensus 99 ~~VsVID~~t~~vv~~--------------I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-- 159 (426)
T 3c75_H 99 TQQFVIDGSTGRILGM--------------TDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-- 159 (426)
T ss_dssp EEEEEEETTTTEEEEE--------------EEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--
T ss_pred CeEEEEECCCCEEEEE--------------EECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--
Confidence 7999999999884322 2122 223 79999999855443 2568999999887
Q ss_pred CCCCcCCcccccCCCCCceEecc--cC---CceeeEEEEecCCCCEEEEecc--CceEEEEeccCCeeEEEeecCccceE
Q 021484 122 PSPLSLSPEDLQKREEPQVYSGH--RN---SQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLMVGDRHVVN 194 (312)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~v~~v~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~ 194 (312)
+.+..+... .. ......+.+ +|++++|+++.. ++.|.+.|+.+++.+..+.....
T Consensus 160 --------------~vv~~I~v~g~~r~~~g~~P~~~~~-spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--- 221 (426)
T 3c75_H 160 --------------LPIADIELPDAPRFLVGTYQWMNAL-TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--- 221 (426)
T ss_dssp --------------CEEEEEEETTCCCCCBSCCGGGSEE-CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---
T ss_pred --------------cEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---
Confidence 555555421 00 011456788 999999998864 57899999999999888864321
Q ss_pred EEEEcCCC-CeEEEEeCCCcEEEccCCCCCCC-----CCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 195 QLEPHPHI-PMFATCGIEKTVKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 195 ~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
....|++ +.+++.+.||.+.+.++.+++.. .+......+.....+.+++..++..+..+.+.+.|+...
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 2223333 34555666777666666444332 111111111111123444455555556788888887543
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=3.8e-07 Score=75.76 Aligned_cols=201 Identities=7% Similarity=0.048 Sum_probs=112.2
Q ss_pred eeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEe---CCCeEEEEEccCCeecCCCCCCCCc---
Q 021484 2 WQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG---SDEYARVYDIRKCHWYSPISSDTPV--- 75 (312)
Q Consensus 2 ~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~--- 75 (312)
.+||+.+.+....+...... ..+...+..++++|++..++++.. .++.|.+||+.+++...........
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~-----~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI-----TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT-----SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred EEEECCCCeEEEEEECChhh-----cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 45777665533333321110 013345789999986545666655 6889999999877654322110000
Q ss_pred -cccccc--ccc--cC------CCccEEEEEEccCCCeEEEe-c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCc--e
Q 021484 76 -DTFCPR--HLI--GK------NNIHITGLAYSNTSELLISY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ--V 140 (312)
Q Consensus 76 -~~~~~~--~~~--~~------~~~~i~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~ 140 (312)
..+... .+. .. -...+..|+|+|+|+.|..+ . ...++.++....... .+. ..+... .
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~---~~~-----~~~~~~~~~ 242 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL---QLT-----DAELGSKIE 242 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT---TCC-----HHHHHTTCE
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC---CCC-----hhhhhcceE
Confidence 000000 000 00 01346889999999866665 3 445666654211000 000 000000 1
Q ss_pred EecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec-CccceEEEEEcCCCCeEEEEeCCCcEEEcc
Q 021484 141 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWA 218 (312)
Q Consensus 141 ~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd 218 (312)
..++... ...+++ +++|+++++...++.|.+||..+++....... +...+.+++|.+++.++++.+..+.+.+|.
T Consensus 243 ~~g~~g~--pdgia~-d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 243 RYSEKPI--CDGISI-DKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEECCS--CSCEEE-CTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred ecccCCC--CceEEE-CCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1223322 567888 89999999999999999999856764433332 234688999999988887776555444444
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.79 E-value=3.6e-06 Score=67.14 Aligned_cols=196 Identities=8% Similarity=-0.026 Sum_probs=116.3
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+..++|+|++..++++-..++.|..+++..... ..+..........+++++++. ++++. ..+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---------------~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~ 101 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP---------------TTIIRQDLGSPEGIALDHLGRTIFWTDSQLD 101 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC---------------EEEECTTCCCEEEEEEETTTTEEEEEETTTT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc---------------EEEEECCCCCccEEEEEecCCeEEEEECCCC
Confidence 4679999997646667777788999999875531 111111224678999999765 44444 478
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc---CceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---CGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~ 186 (312)
.|.++++... ....+.... ......+++ ++++..|+.+.. .+.|..+++.. +....+
T Consensus 102 ~I~~~~~~g~-----------------~~~~~~~~~-~~~P~~i~v-d~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~ 161 (267)
T 1npe_A 102 RIEVAKMDGT-----------------QRRVLFDTG-LVNPRGIVT-DPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL 161 (267)
T ss_dssp EEEEEETTSC-----------------SCEEEECSS-CSSEEEEEE-ETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE
T ss_pred EEEEEEcCCC-----------------CEEEEEECC-CCCccEEEE-eeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE
Confidence 9999998653 222222111 122678998 886555544443 46888888763 333333
Q ss_pred e-cCccceEEEEEcCCCCeE-EEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 187 V-GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 187 ~-~~~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
. ........++++|++..| ++....+.|.++++.+.....+........... . .++.++++...++.|..++....
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~-~-d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVT-S-YGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEE-E-ETTEEEEEETTTTEEEEEETTTT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEE-E-eCCEEEEEECCCCeEEEEeCCCC
Confidence 2 223457899999987765 444566899999987643211110000001111 1 13455666666677777775544
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=1.4e-07 Score=80.10 Aligned_cols=252 Identities=8% Similarity=-0.032 Sum_probs=137.5
Q ss_pred eeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEe----------CCCeEEEEEccCCeecCCCCC
Q 021484 2 WQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISS 71 (312)
Q Consensus 2 ~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~ 71 (312)
.++|+.+.+....+... ..+ .++++|++ +.++++. .++.|.++|..+.+....+..
T Consensus 102 sVID~~t~~vv~~I~vG-----------~~P--gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v 167 (426)
T 3c75_H 102 FVIDGSTGRILGMTDGG-----------FLP--HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL 167 (426)
T ss_dssp EEEETTTTEEEEEEEEC-----------SSC--EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEEECCCCEEEEEEECC-----------CCC--ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC
Confidence 46666665544444332 123 79999999 5555543 467899999998875432211
Q ss_pred CCCcccccccccccCCCccEEEEEEccCCCeEEEe--c-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCc
Q 021484 72 DTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 148 (312)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (312)
+.. ... ........++++|+|+++..+ . ++.|.+.|+.+. +.+..+....
T Consensus 168 ~g~------~r~--~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~----------------kvv~~I~v~g--- 220 (426)
T 3c75_H 168 PDA------PRF--LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK----------------TFDRMLDVPD--- 220 (426)
T ss_dssp TTC------CCC--CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT----------------EEEEEEECCS---
T ss_pred CCc------ccc--ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC----------------eEEEEEEcCC---
Confidence 000 000 001223467999999976664 3 578999999887 5555554321
Q ss_pred eeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE----eecCccce-EEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 149 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL----MVGDRHVV-NQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 149 ~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
. ...+ +.....+++.+.||.+.+.+..+++.... +.....++ ..+.+.+++..++..+..+.|.+.|..+..
T Consensus 221 -~-~~~~-p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 221 -C-YHIF-PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp -E-EEEE-EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred -c-eeec-cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 1 1111 22235556666788888888766655432 11111221 235678998887777788999999987654
Q ss_pred CCCCCC------Chhhh------hhhhccCCCCceeE-Eec---------CCceEEEEEecccCcccee---------Ee
Q 021484 224 FPPLPD------NAEKI------MKANKQGREDHSRI-TLT---------PDVIMHVLRLQRRQTLAYR---------ER 272 (312)
Q Consensus 224 ~~~~~~------~~~~~------~~~~~~~~~~~~l~-s~~---------~d~~i~i~~~~~~~~~~~~---------~~ 272 (312)
...... ..... .....+++++..++ +.. .++.+.++|..+......+ .+
T Consensus 298 ~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~ 377 (426)
T 3c75_H 298 ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINV 377 (426)
T ss_dssp EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEE
T ss_pred eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEE
Confidence 211100 00000 00112344444433 322 2457888888776544443 23
Q ss_pred ecCCC-ccCCCC-CCCeEEEeecCCCC
Q 021484 273 RYNAA-DFESDE-EEGETYLLGFSDSD 297 (312)
Q Consensus 273 ~~~~~-~~~~~~-~~~~v~~~~~~~~~ 297 (312)
.+++. .+.... .++.|.++|.....
T Consensus 378 spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 378 SQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp CCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 44443 333322 45667777765554
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.66 E-value=1.1e-08 Score=85.99 Aligned_cols=140 Identities=9% Similarity=0.010 Sum_probs=75.4
Q ss_pred CCeEEE-ecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEecc
Q 021484 100 SELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 178 (312)
Q Consensus 100 ~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~ 178 (312)
+..+++ +.|+.|+.||..++ +.+..+.. .. +.+..+ ..++..+++++.||.|+.||..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG----------------~~~W~~~~--~~--~~s~p~-~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTG----------------SIKWTLKE--DP--VLQVPT-HVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTC----------------CEEEEEEC--CC--SCCCC------CCEEECTTTCCEEEC---
T ss_pred CCEEEEEcCCCEEEEEECCCC----------------CEEEEecC--CC--ceecce-EcCCCEEEEeCCCCEEEEEECC
Confidence 445555 56999999999988 66666665 22 444444 4567788888999999999999
Q ss_pred CCeeEEEeecCcc-ceE-EEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCceeEEecCCce
Q 021484 179 GGKLVRLMVGDRH-VVN-QLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVI 255 (312)
Q Consensus 179 ~~~~~~~~~~~~~-~v~-~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 255 (312)
+++.+..+..+.. .+. ...+. .+..+++++.|+.|+.||..+++. -.+..+. . ...++++..++.++.++.
T Consensus 68 tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~----~~~~p~~~~v~~~~~dg~ 141 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-A----DSLSPSTSLLYLGRTEYT 141 (369)
T ss_dssp --CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEE
T ss_pred CCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-c----ccccccCCEEEEEecCCE
Confidence 9988766654322 111 11111 345677788899999999998874 2222221 1 112336678888899999
Q ss_pred EEEEEecccCc
Q 021484 256 MHVLRLQRRQT 266 (312)
Q Consensus 256 i~i~~~~~~~~ 266 (312)
++.||..++..
T Consensus 142 v~a~d~~tG~~ 152 (369)
T 2hz6_A 142 ITMYDTKTREL 152 (369)
T ss_dssp EECCCSSSSSC
T ss_pred EEEEECCCCCE
Confidence 99999877643
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=4.9e-07 Score=75.41 Aligned_cols=70 Identities=6% Similarity=-0.096 Sum_probs=55.5
Q ss_pred EEEecCCCCEEEEecc---------CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCe-EEEEe-CCCcEEEccCCC
Q 021484 153 VNFFGPNDEYVMSGSD---------CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCG-IEKTVKLWAPMP 221 (312)
Q Consensus 153 v~~~s~~~~~l~~~~~---------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~t~~-~d~~i~iwd~~~ 221 (312)
+++ +++++.++.+.. ++.+.++|+.+.+.+..+.... ....++|+|+++. +++.. .+++|.++|+.+
T Consensus 269 v~~-s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAK-LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEE-ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEE-cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 667 889888876543 2356699999999988887543 5789999999985 66666 599999999998
Q ss_pred CCC
Q 021484 222 TDF 224 (312)
Q Consensus 222 ~~~ 224 (312)
.+.
T Consensus 347 ~kv 349 (368)
T 1mda_H 347 DQD 349 (368)
T ss_dssp CEE
T ss_pred CcE
Confidence 864
No 230
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=6e-06 Score=64.62 Aligned_cols=152 Identities=13% Similarity=0.127 Sum_probs=102.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCC--eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEE-ec
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YN 107 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s-~~ 107 (312)
-...+.|+ ++ .++.+.+.+| .|+.+|+.++++..... ......-..++. .+. +.+. ..
T Consensus 44 ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~--------------l~~~~FgeGit~--~g~~ly~ltw~ 105 (262)
T 3nol_A 44 FTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIE--------------LGKRYFGEGISD--WKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEE--------------CCTTCCEEEEEE--ETTEEEEEESS
T ss_pred ccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEe--------------cCCccceeEEEE--eCCEEEEEEee
Confidence 35789998 55 6777777766 89999999998542211 111111123444 344 3333 35
Q ss_pred CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 108 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 108 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
++.+.+||..+. +.+..+..... -..+++ +++.|+.+..++.|.++|..+.+.+..+.
T Consensus 106 ~~~v~v~D~~t~----------------~~~~ti~~~~e---G~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 106 NGLGFVWNIRNL----------------RQVRSFNYDGE---GWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp SSEEEEEETTTC----------------CEEEEEECSSC---CCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred CCEEEEEECccC----------------cEEEEEECCCC---ceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 999999999887 67777765332 234544 56777777778899999999999888775
Q ss_pred cC--c---cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 188 GD--R---HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 188 ~~--~---~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.. . ..++.+.|. +|..++..-.+..|.+.|++++++
T Consensus 164 V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred eccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence 42 1 234567776 676666655788999999998874
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.61 E-value=4.4e-06 Score=73.01 Aligned_cols=188 Identities=10% Similarity=0.019 Sum_probs=111.7
Q ss_pred eeecccCccceeeEEecccccCCcCCCCccceEEEEE-c-CCCCcEEEEEe------------------CCCeEEEEEcc
Q 021484 2 WQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVI-D-PRNPNYFAVGG------------------SDEYARVYDIR 61 (312)
Q Consensus 2 ~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-p~~~~~l~~~~------------------~dg~i~iwd~~ 61 (312)
.+.|+.+.+..+++.+.+. .....+++ + |++ .++++++ .++.+.+.|..
T Consensus 115 avIdl~t~~~~~ii~ip~g----------~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~ 183 (595)
T 1fwx_A 115 ARVRCDVMKCDAILEIPNA----------KGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD 183 (595)
T ss_dssp EEEETTTTEEEEEEECSSC----------CSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT
T ss_pred EEEECCCceEeeEEeCCCC----------CCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceEEEEECC
Confidence 4667777776676655432 34778887 5 888 5665553 34678889988
Q ss_pred CCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec--C--------------CcEEEEEcCCCc-----
Q 021484 62 KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--D--------------ELVYLFEKNMGL----- 120 (312)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--d--------------~~i~iwd~~~~~----- 120 (312)
+.++. .++..+ .....++++|+|+++++++ . ..|.++|.....
T Consensus 184 t~~v~--------------~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 184 KWEVA--------------WQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp TTEEE--------------EEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred CCeEE--------------EEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 87632 111111 1234577899998666643 2 225555543211
Q ss_pred C--CCCCcCCcccccC--CCC-CceEecccCCceeeEEEEecCCCCEEEEec-cCceEEEEeccCCe------------e
Q 021484 121 G--PSPLSLSPEDLQK--REE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGK------------L 182 (312)
Q Consensus 121 ~--~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~-~dg~v~iwd~~~~~------------~ 182 (312)
+ .....+.+-+..+ .+. +..+.... ...++.+ +|+|+++++++ .+.+|.++|+.+.+ .
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~-sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNM-APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEE-CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEE-cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 0 0000111111222 122 23333222 2678888 99999876655 68899999998653 3
Q ss_pred EEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC
Q 021484 183 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 183 ~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 221 (312)
+..+... .....++|+|+|...++.-.|++|.+||+..
T Consensus 324 ~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPELG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCBCC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEcCCC-CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 3444322 4568899999994456666899999999876
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.60 E-value=3.1e-06 Score=66.96 Aligned_cols=152 Identities=12% Similarity=0.073 Sum_probs=102.2
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEE
Q 021484 35 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYL 113 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~i 113 (312)
.+++. +.+++++.-.++.+.++|..+.++... +..+... ...++++|+.+..+ .++.|.+
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~--------------i~~g~~~---g~glt~Dg~~l~vs~gs~~l~v 130 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKN--------------FTHQMKD---GWGLATDGKILYGSDGTSILYE 130 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEE--------------EECCSSS---CCEEEECSSSEEEECSSSEEEE
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEE--------------EECCCCC---eEEEEECCCEEEEECCCCeEEE
Confidence 45554 335666677889999999998874322 1111011 12355678755554 5889999
Q ss_pred EEcCCCcCCCCCcCCcccccCCCCCceEecccCCc---eeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc
Q 021484 114 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 190 (312)
Q Consensus 114 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 190 (312)
+|..+. +....+....... .+..+.| . ++...+....++.|.+.|..+++.+..+....
T Consensus 131 iD~~t~----------------~v~~~I~Vg~~~~p~~~~nele~-~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g 192 (266)
T 2iwa_A 131 IDPHTF----------------KLIKKHNVKYNGHRVIRLNELEY-I-NGEVWANIWQTDCIARISAKDGTLLGWILLPN 192 (266)
T ss_dssp ECTTTC----------------CEEEEEECEETTEECCCEEEEEE-E-TTEEEEEETTSSEEEEEETTTCCEEEEEECHH
T ss_pred EECCCC----------------cEEEEEEECCCCcccccceeEEE-E-CCEEEEecCCCCeEEEEECCCCcEEEEEECCC
Confidence 999876 5555554322111 2567888 5 67666666678999999999999988886321
Q ss_pred -------------cceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCC
Q 021484 191 -------------HVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 191 -------------~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~ 223 (312)
...+.++|+|+++. ++++.....|.+.++....
T Consensus 193 ~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 193 LRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp HHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred cccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 24589999999876 6666678888888876653
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.57 E-value=1.8e-05 Score=63.06 Aligned_cols=157 Identities=10% Similarity=-0.016 Sum_probs=92.5
Q ss_pred ccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCC-EEEE
Q 021484 89 IHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMS 165 (312)
Q Consensus 89 ~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~-~l~~ 165 (312)
..+..++|++++. ++++. ..+.|..+++.+. .....+..... ....+++ ++++. ..++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~----------------~~~~~~~~~~~--~p~~ia~-d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG----------------EPTTIIRQDLG--SPEGIAL-DHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC----------------CCEEEECTTCC--CEEEEEE-ETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC----------------CcEEEEECCCC--CccEEEE-EecCCeEEEE
Confidence 4577999999765 44444 4889999998764 22222222212 2788998 77654 4455
Q ss_pred eccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeC---CCcEEEccCCCCCCCCCCCChhhhhhhhccCC
Q 021484 166 GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGI---EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR 242 (312)
Q Consensus 166 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
-...+.|.++++..................++++|++..|..+.. .+.|..+++.......+....-....-..+.+
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC
Confidence 566789999998744322222222246789999997665544443 36888888765433221100000111122444
Q ss_pred C-CceeEEecCCceEEEEEeccc
Q 021484 243 E-DHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 243 ~-~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+ +.+.++-...+.|.++++...
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCEEEEEECCCCEEEEEecCCC
Confidence 3 456677777788888887643
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.56 E-value=7.5e-06 Score=64.14 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=104.3
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 111 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 111 (312)
-...+.|+. + .++.+.+.+|.|+.+|+.+++.... ++.. ...-..+++..+.-++++..++.+
T Consensus 56 ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~--------------~l~~-~~FgeGit~~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 56 FTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWM--------------ERLG-NIFAEGLASDGERLYQLTWTEGLL 118 (268)
T ss_dssp CEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEE--------------EECT-TCCEEEEEECSSCEEEEESSSCEE
T ss_pred ccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeE--------------ECCC-CcceeEEEEeCCEEEEEEccCCEE
Confidence 357888874 4 7888888899999999999984321 1111 111123444432123333469999
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec--C
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG--D 189 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~ 189 (312)
.+||..+. +.+..+..... -..+++ +++.|+.+..++.|.++|..+.+.+..+.. +
T Consensus 119 ~V~D~~Tl----------------~~~~ti~~~~e---GwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 119 FTWSGMPP----------------QRERTTRYSGE---GWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp EEEETTTT----------------EEEEEEECSSC---CCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEECCcC----------------cEEEEEeCCCc---eeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 99999887 67777765332 245554 567777777799999999999998887753 2
Q ss_pred cc---ceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 190 RH---VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 190 ~~---~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.. .++.+.|. +|..++..-.+..|.+.|++++++
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 22 45677777 666666555788999999999874
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.54 E-value=4.1e-06 Score=65.58 Aligned_cols=161 Identities=11% Similarity=0.118 Sum_probs=100.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCP 80 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|+.+|+.+.+....+.+. .........+.+.+++...-.++.+.+||..+.+++.. +.
T Consensus 67 v~~vD~~Tgkv~~~~~l~------------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t---------i~- 124 (262)
T 3nol_A 67 IRKVDIESGKTLQQIELG------------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS---------FN- 124 (262)
T ss_dssp EEEECTTTCCEEEEEECC------------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE---------EE-
T ss_pred EEEEECCCCcEEEEEecC------------CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE---------EE-
Confidence 456777776644444331 12223222233435666666789999999998874322 11
Q ss_pred cccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCce---eeEEEEe
Q 021484 81 RHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT---VKGVNFF 156 (312)
Q Consensus 81 ~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~v~~~ 156 (312)
... ....++++++.|+.+ .++.|.++|..+. +....+.......+ +..+.|
T Consensus 125 ----~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~----------------~v~~~I~V~~~g~~~~~lNELe~- 179 (262)
T 3nol_A 125 ----YDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESL----------------TPVRTITVTAHGEELPELNELEW- 179 (262)
T ss_dssp ----CSS----CCCCEEECSSCEEECCSSSEEEEECTTTC----------------SEEEEEECEETTEECCCEEEEEE-
T ss_pred ----CCC----CceEEecCCCEEEEECCCCeEEEEcCCCC----------------eEEEEEEeccCCccccccceeEE-
Confidence 111 112334567755554 4788999999876 55555554322122 455777
Q ss_pred cCCCCEEEEeccCceEEEEeccCCeeEEEeecC------------ccceEEEEEcCCCCeEEEEe
Q 021484 157 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD------------RHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 157 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------------~~~v~~~~~~p~~~~l~t~~ 209 (312)
. +|+..+..-.+..|.+.|..+++.+..+... ....+.++|+|+++.|...+
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 4 6776666667889999999999998887642 12458899999988866666
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.46 E-value=1.3e-05 Score=73.58 Aligned_cols=193 Identities=10% Similarity=0.096 Sum_probs=106.4
Q ss_pred ceEEEEEc-CCCCcEEEEE-eCCC----eEEEEEccCC-eecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE
Q 021484 32 RLNAIVID-PRNPNYFAVG-GSDE----YARVYDIRKC-HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 104 (312)
Q Consensus 32 ~v~~~~~~-p~~~~~l~~~-~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 104 (312)
.+...+|| |+| ++||-+ ..+| .|+++|+.++ +.. ...+ ......++|+|+|+.|+
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-------------~~~~----~~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTI-------------ADKV----SGTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCC-------------CCCE----EEECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeC-------------Cccc----cCceeeEEEecCCCEEE
Confidence 67889999 999 555543 3333 5999999987 521 0001 11123678999998555
Q ss_pred Ee-cC-----CcEEEEEcCCCcCCCCCcCCcccccCCCC--CceEecccCCceeeEEEEecCCCCEEEEec---cCceEE
Q 021484 105 SY-ND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---DCGHLF 173 (312)
Q Consensus 105 s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~---~dg~v~ 173 (312)
.. .+ ..|+++++.++ .. ...+..... .....+.| +|+|++|+... ....|+
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~----------------~~~~~lv~~~~~~-~~~~~~~~-SpDg~~l~~~~~~~~~~~l~ 298 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKL----------------QSEDVCLYEEHNP-LFSAFMYK-AADTNTLCIGSQSPETAEVH 298 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSC----------------GGGCEEEEECCCT-TCEEEEEE-CTTSSEEEEEEECSSCEEEE
T ss_pred EEEECCCCCCCEEEEEECCCC----------------chhcEEEEecCCC-ceEEEEEE-CCCCCEEEEEecCCCCceEE
Confidence 53 33 25888888764 21 122332211 23567888 99999887655 345788
Q ss_pred EEeccCC--ee-EEEe-ecCccceEEEEEcCCCCeEEEEeCC--C--cEEEccCCC-CCCCC-CCCChhh-hhhhhccCC
Q 021484 174 IWKKKGG--KL-VRLM-VGDRHVVNQLEPHPHIPMFATCGIE--K--TVKLWAPMP-TDFPP-LPDNAEK-IMKANKQGR 242 (312)
Q Consensus 174 iwd~~~~--~~-~~~~-~~~~~~v~~~~~~p~~~~l~t~~~d--~--~i~iwd~~~-~~~~~-~~~~~~~-~~~~~~~~~ 242 (312)
++|+.++ +. +..+ ........++.|+..+.+++....+ + .|..+++.+ ..... +..+... .+....+ .
T Consensus 299 ~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~-~ 377 (751)
T 2xe4_A 299 LLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV-R 377 (751)
T ss_dssp EEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE-C
T ss_pred EEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE-E
Confidence 8998865 23 1333 3334455666655444444454443 3 566667664 33333 2222221 1111111 1
Q ss_pred CCceeEEecCCceEEEEEe
Q 021484 243 EDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 243 ~~~~l~s~~~d~~i~i~~~ 261 (312)
.+.++++...++..+++-+
T Consensus 378 ~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 378 SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp SSEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEeCCEEEEEEE
Confidence 3456667777776555543
No 237
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.46 E-value=0.0002 Score=58.57 Aligned_cols=196 Identities=8% Similarity=-0.044 Sum_probs=111.9
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+.+++|++.+..++.+-..++.|..+++...... . ....++.........+++.+.+. ++++- ..+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------~-----~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~ 99 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 99 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------c-----ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCC
Confidence 46799999876467777777899999998752100 0 00111111123456888987554 55553 588
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceE-ecccCCceeeEEEEecCCCCEEEEecc-C-ceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVMSGSD-C-GHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~s~~~~~l~~~~~-d-g~v~iwd~~~~~~~~~~ 186 (312)
.|.++++... ....+ ..... ....+++ +|.+..|+.+.. . +.|...++. ++....+
T Consensus 100 ~I~~~~~~g~-----------------~~~~~~~~~~~--~P~~iav-dp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~ 158 (316)
T 1ijq_A 100 TVSVADTKGV-----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL 158 (316)
T ss_dssp EEEEEETTSS-----------------SEEEEEECTTC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred EEEEEeCCCC-----------------ceEEEEECCCC--CcceEEe-CCCCCEEEEEccCCCCeEEEEcCC-CCCeEEE
Confidence 9999998753 22222 22222 2688998 776665544433 3 788888886 4433333
Q ss_pred e-cCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCCC---ChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 187 V-GDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 187 ~-~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
. ..-.....++++|++..|..+ ...+.|..+++.+.....+.. ......... . .++.++++-...+.|..++.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~gia-v-~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-V-FEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE-E-ETTEEEEEETTTTEEEEEET
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEE-E-ECCEEEEEECCCCeEEEEeC
Confidence 2 233467899999987765554 466799999987644322211 001111111 1 13456666666677766664
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=6.6e-05 Score=58.23 Aligned_cols=154 Identities=8% Similarity=0.034 Sum_probs=101.4
Q ss_pred cceEEEEEcCCCCcEEEEEeCC--CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE-ec
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSD--EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN 107 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~ 107 (312)
.-...+.|++ + .++.+.+.+ ..|+.+|+.++++..... + .. ...--.++... +++... ..
T Consensus 21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~------------l-~~-~~fgeGi~~~~-~~ly~ltw~ 83 (243)
T 3mbr_X 21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAE------------V-PP-PYFGAGIVAWR-DRLIQLTWR 83 (243)
T ss_dssp CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEE------------C-CT-TCCEEEEEEET-TEEEEEESS
T ss_pred cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEe------------C-CC-CcceeEEEEeC-CEEEEEEee
Confidence 4577999987 4 677776665 489999999998542211 0 11 11112334332 233333 36
Q ss_pred CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 108 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 108 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
++.+.+||..+. +.+.++..... -..+++ +++.|+.+..++.|.++|..+.+.+..+.
T Consensus 84 ~~~v~v~D~~tl----------------~~~~ti~~~~~---Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 84 NHEGFVYDLATL----------------TPRARFRYPGE---GWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp SSEEEEEETTTT----------------EEEEEEECSSC---CCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCcC----------------cEEEEEeCCCC---ceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 999999999887 67777765432 245554 56666666678999999999999888776
Q ss_pred cCc-----cceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 188 GDR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 188 ~~~-----~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
... ..++.+.|. +|+.++..-.+..|.+.|++++++
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBE
T ss_pred EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCE
Confidence 422 245667765 666665555678999999998864
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.44 E-value=1.9e-05 Score=66.16 Aligned_cols=224 Identities=10% Similarity=0.046 Sum_probs=119.6
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 123 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~ 123 (312)
..+++++.++.|..+|..+++............. .......+.......++.+++.+.++.|+.+|..++
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG---- 123 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW------FSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDG---- 123 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---C------CSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTC----
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCcccccc------ccccCcccccCceEeCCEEEEEcCCCEEEEEECCCC----
Confidence 4677788889999999998875432211100000 000012232222223455666667999999999887
Q ss_pred CCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccce-----EEEEE
Q 021484 124 PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV-----NQLEP 198 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~ 198 (312)
+.+..+...... ...... .+..++.++.++.|..+|..+++.+-......... .....
T Consensus 124 ------------~~~W~~~~~~~~--~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 124 ------------TVAWQTKVAGEA--LSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp ------------CEEEEEECSSCC--CSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred ------------CEEEEEeCCCce--EcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 555444433211 222222 24577888899999999999999877665432111 11222
Q ss_pred cCCCCeEEEEeCCCcEEEccCCCCCCC---CCCCChhh--h--hhhhccCC--CCceeEEecCCceEEEEEecccCccce
Q 021484 199 HPHIPMFATCGIEKTVKLWAPMPTDFP---PLPDNAEK--I--MKANKQGR--EDHSRITLTPDVIMHVLRLQRRQTLAY 269 (312)
Q Consensus 199 ~p~~~~l~t~~~d~~i~iwd~~~~~~~---~~~~~~~~--~--~~~~~~~~--~~~~l~s~~~d~~i~i~~~~~~~~~~~ 269 (312)
.+..++.++.++.|..+|..+++.. ........ . +......+ .+..++.++.++.+..+|..+.... |
T Consensus 187 --~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~-w 263 (376)
T 3q7m_A 187 --AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM-W 263 (376)
T ss_dssp --ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE-E
T ss_pred --ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE-e
Confidence 2456777788999999999877631 11100000 0 00000111 2456667777888888887655322 2
Q ss_pred eE-------eecCCCccCCCCCCCeEEEeecCCCC
Q 021484 270 RE-------RRYNAADFESDEEEGETYLLGFSDSD 297 (312)
Q Consensus 270 ~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~ 297 (312)
.. .......+.....++.++.+|..++.
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 264 KRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EECCCCEEEEEEETTEEEEEETTCCEEEEETTTCC
T ss_pred eccCCCCCCceEECCEEEEEcCCCeEEEEECCCCc
Confidence 21 11112222223344567777766554
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.42 E-value=7.6e-06 Score=74.37 Aligned_cols=196 Identities=11% Similarity=0.089 Sum_probs=113.0
Q ss_pred CCeEEEEEccCCeecCCCCC--CCCccccccccc------cc--------CCCccEEEEEEccCCCeEEEe-cCC-----
Q 021484 52 DEYARVYDIRKCHWYSPISS--DTPVDTFCPRHL------IG--------KNNIHITGLAYSNTSELLISY-NDE----- 109 (312)
Q Consensus 52 dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~------~~--------~~~~~i~~~~~~~~~~~l~s~-~d~----- 109 (312)
++.|+.||..+++++..... ..+...+....+ .. ++......++++|++.+++.+ .++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 78999999999986643321 011100000000 00 111112357888887766665 454
Q ss_pred --------------cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC-------ceeeEEEEecCCCC---EEEE
Q 021484 110 --------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDE---YVMS 165 (312)
Q Consensus 110 --------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~v~~~s~~~~---~l~~ 165 (312)
.|..+|..++ +.+..++..... ..+.-... ..+|+ .++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG----------------~~~W~~~~~~~d~wd~~~~~~~~l~d~-~~~G~~~~~v~~ 324 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTG----------------EYVWHYQTTPGDAWDYTATQHMILAEL-PIDGKPRKVLMQ 324 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTC----------------CEEEEEESSTTCCSCCCCCSCEEEEEE-EETTEEEEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEEccCC----------------ceeEeeecCCcccccccCCCCcEEEee-ccCCcEEEEEEE
Confidence 3999999988 565555432110 01111121 22454 7889
Q ss_pred eccCceEEEEeccCCeeEEEeecCcc---------------------------------------ceEEEEEcCCCCeEE
Q 021484 166 GSDCGHLFIWKKKGGKLVRLMVGDRH---------------------------------------VVNQLEPHPHIPMFA 206 (312)
Q Consensus 166 ~~~dg~v~iwd~~~~~~~~~~~~~~~---------------------------------------~v~~~~~~p~~~~l~ 206 (312)
++.+|.++++|..+|+.+........ .-..++++|+..+++
T Consensus 325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~y 404 (689)
T 1yiq_A 325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVY 404 (689)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEE
Confidence 99999999999999998744321100 011267888888766
Q ss_pred EEeC---------------------------------------------CCcEEEccCCCCCCC-CCCCChhhhhhhhcc
Q 021484 207 TCGI---------------------------------------------EKTVKLWAPMPTDFP-PLPDNAEKIMKANKQ 240 (312)
Q Consensus 207 t~~~---------------------------------------------d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~ 240 (312)
+... +|.|+.||+.++++. .+. +...... ...
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~-g~~ 482 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP-YVTIFNG-GTL 482 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE-ESSSCCC-CEE
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc-CCCCccC-ccc
Confidence 6532 377999999887631 111 1111111 112
Q ss_pred CCCCceeEEecCCceEEEEEecccCc
Q 021484 241 GREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 241 ~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
...+.+++.++.|+.++.||.+++..
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eECCCEEEEECCCCcEEEEECCCCcc
Confidence 33567888999999999999877643
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.41 E-value=1.4e-05 Score=62.65 Aligned_cols=158 Identities=10% Similarity=0.032 Sum_probs=100.8
Q ss_pred CeeecccCccceeeEEecccccCCcCCCCccceE--EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccc
Q 021484 1 MWQFDLRSDSATRLFYCSSFSENSKQPMNSIRLN--AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF 78 (312)
Q Consensus 1 v~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 78 (312)
|+.+|+.+.+....+ ... ... .+++. +.+++...-.++.+.+||..+.+++..+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~------------~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti--------- 132 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLG------------NIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTT--------- 132 (268)
T ss_dssp EEECCSSCSSCSEEE-ECT------------TCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEE---------
T ss_pred EEEEECCCCcEEeEE-CCC------------CcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEE---------
Confidence 456777776654444 321 122 34444 4357777778999999999998853221
Q ss_pred cccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCc---eeeEEE
Q 021484 79 CPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVKGVN 154 (312)
Q Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~ 154 (312)
. .. .. -..+ .++++.|+.+ .++.|.++|..+. +....+....... .+..+.
T Consensus 133 ~-----~~-~e-GwGL--t~Dg~~L~vSdGs~~l~~iDp~T~----------------~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 133 R-----YS-GE-GWGL--CYWNGKLVRSDGGTMLTFHEPDGF----------------ALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp E-----CS-SC-CCCE--EEETTEEEEECSSSEEEEECTTTC----------------CEEEEEECEETTEECCCEEEEE
T ss_pred e-----CC-Cc-eeEE--ecCCCEEEEECCCCEEEEEcCCCC----------------eEEEEEEeCCCCcccccccccE
Confidence 1 11 11 1233 3567766665 5889999999876 5555555332222 256677
Q ss_pred EecCCCCEEEEeccCceEEEEeccCCeeEEEeecC-------------ccceEEEEEcCCCCeEEEEe
Q 021484 155 FFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-------------RHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 155 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~l~t~~ 209 (312)
| . +|+..+..-.+..|.+.|..+++.+..+... ....+.++|+|+++.|+..+
T Consensus 188 ~-~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 188 C-A-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp E-E-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred E-e-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7 4 6766666667889999999999998877632 12568899999877655554
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=8e-05 Score=60.99 Aligned_cols=170 Identities=12% Similarity=0.077 Sum_probs=101.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccc--cccc---ccccCCCccEEEEEEcc-CCCeEEE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT--FCPR---HLIGKNNIHITGLAYSN-TSELLIS 105 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~i~~~~~~~-~~~~l~s 105 (312)
...+++|++++ +++.++..++.|..|+..+++...... ...... .+.. .........+..+++.+ +++++++
T Consensus 20 ~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDFAY-ASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEEEE-SCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEEec-ccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 35678899987 777788889999999987654210000 000000 0000 00000123578899997 7776666
Q ss_pred ecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC---CceeeEEEEecC-CCCEEEEecc-------------
Q 021484 106 YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGP-NDEYVMSGSD------------- 168 (312)
Q Consensus 106 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~v~~~s~-~~~~l~~~~~------------- 168 (312)
...+.|..+|..++ ....+..... ......+++ .+ +|++.++-..
T Consensus 98 d~~~~i~~~d~~~g-----------------~~~~~~~~~~~~~~~~p~~i~~-d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 98 DCYYHLSVVGSEGG-----------------HATQLATSVDGVPFKWLYAVTV-DQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp ETTTEEEEECTTCE-----------------ECEEEESEETTEECSCEEEEEE-CTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred ECCCCEEEEeCCCC-----------------EEEEecccCCCCcccccceEEE-ecCCCEEEEECCcccccccccceehc
Confidence 55555888887654 1222221110 112678888 88 8887766432
Q ss_pred ----CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCC
Q 021484 169 ----CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPT 222 (312)
Q Consensus 169 ----dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~ 222 (312)
++.|..+|..+++...... .......++++|+++.|..+ ...+.|..|++.+.
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred ccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 4789999987776533222 12345679999999865544 56689999998764
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.40 E-value=8.5e-06 Score=66.81 Aligned_cols=174 Identities=10% Similarity=0.090 Sum_probs=102.5
Q ss_pred EEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCC
Q 021484 45 YFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSP 124 (312)
Q Consensus 45 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~ 124 (312)
.+..++.++.|..+|.. ++.... . ..+...+.++...+++.+++.+.++.|..+|.. +
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~--------------~-~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g----- 166 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWR--------------F-KTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G----- 166 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEE--------------E-ECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S-----
T ss_pred EEEEEecCCEEEEEcCC-CCEEEE--------------E-cCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C-----
Confidence 56666677777777776 442110 0 111223445566667777776678889999887 4
Q ss_pred CcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCe
Q 021484 125 LSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM 204 (312)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 204 (312)
+....+..... .+.++.. .+++.+++ ++ +.|..+| .+++.+..+......+.++...+++.+
T Consensus 167 -----------~~~~~~~~~~~--~~~~~~~-d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l 228 (330)
T 3hxj_A 167 -----------TEKWRFKTNDA--ITSAASI-GKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI 228 (330)
T ss_dssp -----------CEEEEEECSSC--CCSCCEE-CTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE
T ss_pred -----------CEeEEEecCCC--ceeeeEE-cCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE
Confidence 44444443332 2666766 66777554 44 8899999 677777666655566788888888765
Q ss_pred EEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 205 FATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 205 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
.+ ++.++.|..++..+.....+... .......... .+..+..++.++.+..++.
T Consensus 229 ~v-~t~~~gl~~~~~~g~~~~~~~~~-~~~~~~~~~~-~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 229 YV-TSLDGHLYAINPDGTEKWRFKTG-KRIESSPVIG-NTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp EE-EETTTEEEEECTTSCEEEEEECS-SCCCSCCEEC-TTSCEEEECTTCEEEEECT
T ss_pred EE-EcCCCeEEEECCCCCEeEEeeCC-CCccccceEc-CCCeEEEecCCCCEEEECC
Confidence 44 55677888888654433222111 1111111112 2345666777777777773
No 244
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.39 E-value=0.00012 Score=61.19 Aligned_cols=187 Identities=8% Similarity=-0.027 Sum_probs=107.0
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 123 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~ 123 (312)
..++.++.++.|..+|..+++.........+.... .....+ ... ++.+++...++.+..+|..++
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~------~~~~~~----~~~-~~~v~~g~~~g~l~~~d~~tG---- 208 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL------RGESAP----TTA-FGAAVVGGDNGRVSAVLMEQG---- 208 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----------CCCCCC----EEE-TTEEEECCTTTEEEEEETTTC----
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee------cCCCCc----EEE-CCEEEEEcCCCEEEEEECCCC----
Confidence 46777888999999999988754322211111000 001111 111 344444446899999999877
Q ss_pred CCcCCcccccCCCCCceEecccCCc-----e---e-eEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceE
Q 021484 124 PLSLSPEDLQKREEPQVYSGHRNSQ-----T---V-KGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVN 194 (312)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~---v-~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 194 (312)
+.+.......... . + ..... .+..++.++.++.+..+|..+++.+..... ....
T Consensus 209 ------------~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~ 271 (376)
T 3q7m_A 209 ------------QMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVN 271 (376)
T ss_dssp ------------CEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEE
T ss_pred ------------cEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCC
Confidence 4443333211000 0 0 11111 256777888899999999999987765542 2334
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEccCCCCCCC-CCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecccCc
Q 021484 195 QLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 195 ~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
.+.. .+..+..++.++.|..+|..+++.. ............ ....+..++.++.++.+..+|..++..
T Consensus 272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~~~~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTS--PVLYNGNLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCC--CEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccC--CEEECCEEEEEeCCCeEEEEECCCCcE
Confidence 4444 4567777788999999999887631 111000111000 011345788888899999999776643
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.39 E-value=6.2e-06 Score=74.79 Aligned_cols=54 Identities=9% Similarity=0.004 Sum_probs=43.3
Q ss_pred ceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 170 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 170 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
|.|..||+.+++.+-.+... .++....+...+..++.++.|+.+++||.++++.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 78999999999988777633 3444555667788888889999999999998874
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=4.2e-05 Score=59.34 Aligned_cols=132 Identities=10% Similarity=0.046 Sum_probs=87.3
Q ss_pred CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCcEEEEEcCCCc
Q 021484 42 NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGL 120 (312)
Q Consensus 42 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~ 120 (312)
+.+++...-.++.+.+||..+.+++..+ . ....+ ..+ .++++.|..+ .++.|.++|..+.
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti---------~-----~~~~G--wgl--t~dg~~L~vSdgs~~l~~iDp~t~- 134 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARF---------R-----YPGEG--WAL--TSDDSHLYMSDGTAVIRKLDPDTL- 134 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEE---------E-----CSSCC--CEE--EECSSCEEEECSSSEEEEECTTTC-
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEE---------e-----CCCCc--eEE--eeCCCEEEEECCCCeEEEEeCCCC-
Confidence 4366777778999999999998843221 1 11111 233 3566655444 5889999999876
Q ss_pred CCCCCcCCcccccCCCCCceEecccCCc---eeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecC--------
Q 021484 121 GPSPLSLSPEDLQKREEPQVYSGHRNSQ---TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-------- 189 (312)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------- 189 (312)
+....+....... .+..+.| . +|+..+..-.+..|.+.|..+++.+..+...
T Consensus 135 ---------------~~~~~I~V~~~g~~~~~lNeLe~-~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~ 197 (243)
T 3mbr_X 135 ---------------QQVGSIKVTAGGRPLDNLNELEW-V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA 197 (243)
T ss_dssp ---------------CEEEEEECEETTEECCCEEEEEE-E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS
T ss_pred ---------------eEEEEEEEccCCcccccceeeEE-e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc
Confidence 5555555332211 2556776 3 6766666657889999999999998887622
Q ss_pred ----c-cceEEEEEcCCCCeEEEEe
Q 021484 190 ----R-HVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 190 ----~-~~v~~~~~~p~~~~l~t~~ 209 (312)
. ...+.++++|+++.|...+
T Consensus 198 ~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 198 LTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1 2458899999887766555
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.36 E-value=0.00018 Score=56.55 Aligned_cols=164 Identities=7% Similarity=0.045 Sum_probs=102.8
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d 108 (312)
...+..++|+|++..++++...++.|...|.. ++....+ .+.+ ....-.|++.+++.++++. .+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i-------------~l~g-~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI-------------PLDF-VKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-------------ECSS-CSSEEEEEECSTTEEEEEETTT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-------------ecCC-CCChHHeEEeCCCEEEEEECCC
Confidence 45799999999875677778889999999987 5532111 0111 2456788898888877776 48
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe----cccCCceeeEEEEecCCCCEEEEeccCceEEEEecc---CCe
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS----GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK---GGK 181 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~---~~~ 181 (312)
+.+.++++..... . ....... ......-...++| +|.++.|+++.+.....+|.+. ...
T Consensus 91 ~~l~~~~v~~~~~-------i------~~~~~~~~~~~~~~~N~g~EGLA~-d~~~~~L~va~E~~p~~i~~~~g~~~~~ 156 (255)
T 3qqz_A 91 YAIYVISLTPNSE-------V------KILKKIKIPLQESPTNCGFEGLAY-SRQDHTFWFFKEKNPIEVYKVNGLLSSN 156 (255)
T ss_dssp TEEEEEEECTTCC-------E------EEEEEEECCCSSCCCSSCCEEEEE-ETTTTEEEEEEESSSEEEEEEESTTCSS
T ss_pred CcEEEEEcCCCCe-------e------eeeeeeccccccccccCCcceEEE-eCCCCEEEEEECcCCceEEEEcccccCC
Confidence 8899998865410 0 0011111 0011122789999 8888777777766555555543 111
Q ss_pred eEEEee-------cCccceEEEEEcCCCCe-EEEEeCCCcEEEccCCCC
Q 021484 182 LVRLMV-------GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 182 ~~~~~~-------~~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~ 222 (312)
.+..+. .+...+..++++|.... ++.....+.|..+|..+.
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 222221 12335688999997666 555557788888997765
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.35 E-value=3.2e-05 Score=67.64 Aligned_cols=187 Identities=10% Similarity=0.010 Sum_probs=116.9
Q ss_pred CCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEE-c-cCCCeEEEec----------
Q 021484 40 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-S-NTSELLISYN---------- 107 (312)
Q Consensus 40 p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~s~~---------- 107 (312)
++|..++++...+..|.+.|+.+.++...+ .+ .....+..+++ + |+++++..+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii------------~i--p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg 164 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAIL------------EI--PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDG 164 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEE------------EC--SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSS
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEE------------eC--CCCCCCcceeeeecCCCcEEEEecccccccCCCC
Confidence 377445555566778999999998743210 11 12245678887 4 8888666652
Q ss_pred ---------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCc--------
Q 021484 108 ---------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG-------- 170 (312)
Q Consensus 108 ---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg-------- 170 (312)
++.+.+.|..+. +....+.-... ...+++ +|+|+++++.+.+.
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~----------------~v~~qI~Vgg~---pd~~~~-spdGk~~~vt~~~se~~~~i~~ 224 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKW----------------EVAWQVLVSGN---LDNCDA-DYEGKWAFSTSYNSEKGMTLPE 224 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTT----------------EEEEEEEESSC---CCCEEE-CSSSSEEEEEESCTTCCSSHHH
T ss_pred cccccccccCceEEEEECCCC----------------eEEEEEEeCCC---ccceEE-CCCCCEEEEEecCcccCcchhh
Confidence 456888888775 45555442221 345666 88999888877543
Q ss_pred ------------------------------eEEEEeccC--Cee-EEEeecCccceEEEEEcCCCCeEEEEe-CCCcEEE
Q 021484 171 ------------------------------HLFIWKKKG--GKL-VRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKL 216 (312)
Q Consensus 171 ------------------------------~v~iwd~~~--~~~-~~~~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~i 216 (312)
.|.+.|..+ ++. +..+... ....++.++|+|++++.++ .+.+|.+
T Consensus 225 ~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsV 303 (595)
T 1fwx_A 225 MTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTV 303 (595)
T ss_dssp HTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEE
T ss_pred ccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEE
Confidence 366667665 444 4444322 2446799999999965555 7889999
Q ss_pred ccCCCCC------C-------CCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 217 WAPMPTD------F-------PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 217 wd~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
+|+.+.+ + ..+... ... .-..+.+++...++.--++.+.+|++..
T Consensus 304 id~~~~~~~~~~~l~~~~~v~~~v~vG-~gP-~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 304 LDVTRFDAVFYENADPRSAVVAEPELG-LGP-LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEGGGHHHHHHSCCCGGGGEEECCBCC-SCE-EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EECcccccccccccCcccceEEEcCCC-CCc-ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 9998542 1 111100 111 1122556676667788889999999876
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.35 E-value=1e-05 Score=73.42 Aligned_cols=197 Identities=10% Similarity=0.097 Sum_probs=115.2
Q ss_pred CCeEEEEEccCCeecCCCCCCCCcc--------------ccc--ccccc-cCCCccEEEEEEccCCCeEEEe-cCC----
Q 021484 52 DEYARVYDIRKCHWYSPISSDTPVD--------------TFC--PRHLI-GKNNIHITGLAYSNTSELLISY-NDE---- 109 (312)
Q Consensus 52 dg~i~iwd~~~~~~~~~~~~~~~~~--------------~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~s~-~d~---- 109 (312)
++.|+.+|..+++++.......+.. .+. ..... .+.......++++|++.++..+ .++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 7999999999998764432211110 000 00000 0111222357888888766654 332
Q ss_pred ---------------cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCC-------ceeeEEEEecCCC---CEEE
Q 021484 110 ---------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPND---EYVM 164 (312)
Q Consensus 110 ---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~v~~~s~~~---~~l~ 164 (312)
.|..+|..++ +.+..++..... ....-+.. ..+| ..++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG----------------~~~W~~~~~~~d~wd~~~~~~p~l~~~-~~dG~~~~~l~ 331 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTG----------------KYKWHYQETPGDNWDYTSTQPMILADI-KIAGKPRKVIL 331 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTC----------------CEEEEEESSTTCCSCCCCCSCCEEEEE-EETTEEEEEEE
T ss_pred CCCCCccCCCCeeeEEEEEEECCCC----------------CEEEEEecCCCcccccccCCCcEEEec-ccCCcEeeEEE
Confidence 4888898887 555555432110 00112222 3366 6889
Q ss_pred EeccCceEEEEeccCCeeEEEeecCcc-----------ce------------------------EEEEEcCCCCeEEEEe
Q 021484 165 SGSDCGHLFIWKKKGGKLVRLMVGDRH-----------VV------------------------NQLEPHPHIPMFATCG 209 (312)
Q Consensus 165 ~~~~dg~v~iwd~~~~~~~~~~~~~~~-----------~v------------------------~~~~~~p~~~~l~t~~ 209 (312)
.++.+|.|+++|..+|+.+..+..... ++ ..++++|+..++++..
T Consensus 332 ~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 332 HAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPA 411 (677)
T ss_dssp ECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEE
T ss_pred EECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeC
Confidence 999999999999999998876642210 01 1468899888876654
Q ss_pred C-------------------------------------------CCcEEEccCCCCCCC-CCCCChhhhhhhhccCCCCc
Q 021484 210 I-------------------------------------------EKTVKLWAPMPTDFP-PLPDNAEKIMKANKQGREDH 245 (312)
Q Consensus 210 ~-------------------------------------------d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 245 (312)
. .+.|..||+.++++. .+. +...... ......+.
T Consensus 412 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~-g~~~~~g~ 489 (677)
T 1kb0_A 412 QNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNG-GTLTTAGN 489 (677)
T ss_dssp EECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCC-CEEEETTT
T ss_pred hhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcC-cceEeCCC
Confidence 3 277999999887631 111 1111111 11223566
Q ss_pred eeEEecCCceEEEEEecccCcc
Q 021484 246 SRITLTPDVIMHVLRLQRRQTL 267 (312)
Q Consensus 246 ~l~s~~~d~~i~i~~~~~~~~~ 267 (312)
.++.++.++.+++||..+...+
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCCCcEEEEECCCCcee
Confidence 7888899999999998776443
No 250
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.34 E-value=1.4e-05 Score=66.56 Aligned_cols=102 Identities=6% Similarity=-0.198 Sum_probs=67.2
Q ss_pred cEEEEEeCCC----eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec-----------C
Q 021484 44 NYFAVGGSDE----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-----------D 108 (312)
Q Consensus 44 ~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-----------d 108 (312)
+.+++-..++ +|.+.|..+++.+ ..+..+. .+ .++++|+++.+..+. +
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~--------------~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~ 95 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTL--------------GHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEE--------------EEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEE--------------EEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCC
Confidence 4445544445 8889999998843 2222232 23 699999998555542 6
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccC-----CceeeEEEEecCCCCEEEEecc--CceEEE--EeccC
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-----SQTVKGVNFFGPNDEYVMSGSD--CGHLFI--WKKKG 179 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~s~~~~~l~~~~~--dg~v~i--wd~~~ 179 (312)
+.|.+||+.+. +.+..+..... ......+++ +|+|++++++.. ...|.+ +|..+
T Consensus 96 ~~VsviD~~T~----------------~vv~~I~v~~~~~~~~g~~P~~ia~-SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 96 DYVEVFDPVTF----------------LPIADIELPDAPRFSVGPRVHIIGN-CASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEECTTTC----------------CEEEEEEETTSCSCCBSCCTTSEEE-CTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCC----------------CEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 78999999987 66666653300 011457888 899999888764 456777 77643
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.34 E-value=0.00038 Score=57.76 Aligned_cols=191 Identities=8% Similarity=-0.050 Sum_probs=111.3
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+..++|++.+..++.+-...+.|+.+++..... ..+..........+++.+.+. ++.+- ..+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~---------------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNV---------------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------------EEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCc---------------eEEEeCCCCCccEEEEecCCCeEEEEcCCCC
Confidence 4678999986646666666788899898876531 111111123456888987554 44553 578
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEE-EEeccC-ceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYV-MSGSDC-GHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l-~~~~~d-g~v~iwd~~~~~~~~~~ 186 (312)
.|.+.++... ....+. .... ....+++ +|.+..| ++-... +.|..+++.... ...+
T Consensus 139 ~I~~~~~dG~-----------------~~~~l~~~~l~--~P~~iav-dp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~ 197 (349)
T 3v64_C 139 RIEVANLDGA-----------------HRKVLLWQSLE--KPRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGSG-RRII 197 (349)
T ss_dssp EEEEEETTSC-----------------SCEEEECTTCS--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCS-CEES
T ss_pred eEEEEcCCCC-----------------ceEEEEeCCCC--CcceEEE-ecCcCeEEEeccCCCCEEEEEeCCCCC-cEEE
Confidence 8999998754 222222 2222 2688998 7755544 444445 789999887433 3333
Q ss_pred -ecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCC-CChhhhhhhhccCCCCceeEEecCCceEEEEE
Q 021484 187 -VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 187 -~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~ 260 (312)
...-...+.++++|++..|..+ ...+.|..+++.+.....+. .......... . .++.+.++-...+.|..++
T Consensus 198 ~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gia-v-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 198 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT-V-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEE-E-ETTEEEEEETTTTEEEEEE
T ss_pred EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEE-E-ECCEEEEecCCCCeEEEEE
Confidence 2233457899999877665444 46678999998764332211 1111111111 1 2345556665666666555
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.33 E-value=8.7e-05 Score=60.78 Aligned_cols=198 Identities=9% Similarity=0.069 Sum_probs=109.9
Q ss_pred ceEEEEEcC-CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc-CCCeEEEec--
Q 021484 32 RLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYN-- 107 (312)
Q Consensus 32 ~v~~~~~~p-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~-- 107 (312)
.+..+++.+ ++ +++++ ...+.|..+|..++... .+.. ............+++.+ +|.+.++..
T Consensus 81 ~p~gi~~~~~~g-~l~v~-d~~~~i~~~d~~~g~~~----------~~~~-~~~~~~~~~p~~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 81 RTYDISYNLQNN-QLYIV-DCYYHLSVVGSEGGHAT----------QLAT-SVDGVPFKWLYAVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp CEEEEEEETTTT-EEEEE-ETTTEEEEECTTCEECE----------EEES-EETTEECSCEEEEEECTTTCCEEEEESCS
T ss_pred CCceEEEcCCCC-cEEEE-ECCCCEEEEeCCCCEEE----------Eecc-cCCCCcccccceEEEecCCCEEEEECCcc
Confidence 478899998 55 44444 44455888887655311 0000 00001123467899999 998777642
Q ss_pred ----------------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEe-ccCc
Q 021484 108 ----------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-SDCG 170 (312)
Q Consensus 108 ----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~-~~dg 170 (312)
++.|..||..++ +. ..+...... ...+++ ++++++|+.+ +..+
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~----------------~~-~~~~~~~~~--p~gia~-~~dg~~lyv~d~~~~ 207 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTK----------------ET-TLLLKELHV--PGGAEV-SADSSFVLVAEFLSH 207 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTT----------------EE-EEEEEEESC--CCEEEE-CTTSSEEEEEEGGGT
T ss_pred cccccccceehcccCCCceEEEEeCCCC----------------EE-EEeccCCcc--CcceEE-CCCCCEEEEEeCCCC
Confidence 266888887654 22 222211112 567898 8999866555 5678
Q ss_pred eEEEEeccCCe--eEEEeecCccceEEEEEcCCCCeEEEEeC----------CCcEEEccCCCCCCCCCCCChh---hhh
Q 021484 171 HLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGI----------EKTVKLWAPMPTDFPPLPDNAE---KIM 235 (312)
Q Consensus 171 ~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~t~~~----------d~~i~iwd~~~~~~~~~~~~~~---~~~ 235 (312)
.|.+|++.... ....+....+ ...+++.++|++.++... .+.|..+|.....+..+..... ...
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~ 286 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHF 286 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCC
T ss_pred eEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccc
Confidence 99999987421 1112211223 788999999998666644 4678888876433222211111 001
Q ss_pred hhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
..... .++.+.++...++.|..+++...
T Consensus 287 ~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 287 EQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred eEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 11111 24556666666677777775533
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.33 E-value=0.00024 Score=59.82 Aligned_cols=192 Identities=8% Similarity=-0.087 Sum_probs=111.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+..++|++.+..++.+-...+.|+.+++...... .+..........+++.+.+. ++++- ..+
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------------~~~~~~~~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---------------EEECSSCSCCCCEEEETTTTEEEEEETTTT
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---------------EEEeCCCCCccEEEEEeCCCeEEEEcCCCC
Confidence 46789999866467777677889999998765311 11111123345788887554 44443 477
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEe-ccC-ceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSG-SDC-GHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~-~~d-g~v~iwd~~~~~~~~~~ 186 (312)
.|.+.++... ....+. .... ....+++ +|.+..|+.+ ... +.|..+++.........
T Consensus 182 ~I~~~~~dg~-----------------~~~~l~~~~l~--~P~giav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 182 RIEVANLDGA-----------------HRKVLLWQSLE--KPRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EEEECBTTSC-----------------SCEEEECSSCS--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred eEEEEeCCCC-----------------ceEEeecCCCC--CCcEEEE-EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 8888887653 222222 2222 2688888 7766555444 344 78988888744333333
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCceeEEecCCceEEEEE
Q 021484 187 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~ 260 (312)
...-...+.++++|++..|..+ ...+.|..+++.+.....+.. ......... . .++.++++-...+.|..++
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gia-v-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT-V-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEE-E-ETTEEEEEETTTTEEEEEE
T ss_pred ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEE-E-ECCEEEEeeCCCCeEEEEE
Confidence 3333457899999876665444 466789999987643322111 111111111 1 2345566666666666665
No 254
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.00035 Score=59.08 Aligned_cols=198 Identities=8% Similarity=-0.018 Sum_probs=113.9
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCC-CeEEEe-cC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY-ND 108 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~-~d 108 (312)
..+..++|++.+..++.+-...+.|+.+++...... . ....+..........+++.+.+ .++++- ..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~-----~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~ 180 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL 180 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------------C-----CCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------C-----cceEEEeCCCCCcccEEEEecCCceEEEECCC
Confidence 457899999876466666667788998888652200 0 0111112234467789998854 455553 57
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec--cCceEEEEeccCCeeEEEe
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~ 186 (312)
+.|.+.++... .....+..... ....+++ +|.+.+|+... ..+.|...++........+
T Consensus 181 ~~I~~~~~~g~----------------~~~~l~~~~~~--~P~~iav-dp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 181 GTVSVADTKGV----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp TEEEEECTTTC----------------SEEEEEECSSC--CEEEEEE-ETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred CeEEEEeCCCC----------------ceEEEEeCCCC--CcceEEE-ecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 88999988754 22222222222 2788998 77666555443 2478988888744333333
Q ss_pred ecCccceEEEEEcCCCCeEEEEe-CCCcEEEccCCCCCCCCCCCC---hhhhhhhhccCCCCceeEEecCCceEEEEE
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPDN---AEKIMKANKQGREDHSRITLTPDVIMHVLR 260 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~ 260 (312)
...-...+.++++|++..|..+. ....|..+|+.+.....+... ........ . .++.++++-...+.|..++
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~-v-~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-V-FEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEE-E-ETTEEEEEESSSCSEEEEE
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEE-E-eCCEEEEecCCCCeEEEEE
Confidence 33335678999998877765554 567899999876543322110 11111111 1 2344555665666666666
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.31 E-value=0.00022 Score=58.26 Aligned_cols=197 Identities=9% Similarity=-0.040 Sum_probs=114.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+.++.|++.++.++.+-...+.|..+++..... ...+..........+++.+.+. ++.+- ..+
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~--------------~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~ 101 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--------------VQNVVVSGLLSPDGLACDWLGEKLYWTDSETN 101 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC--------------CCEEEEECCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc--------------eEEEEcCCCCCccEEEEEcCCCeEEEEECCCC
Confidence 4668999986646777777788999999876531 0001011123456788887554 55553 578
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEec--cCceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~ 186 (312)
.|.++++... ....+. .... ....+++ +|.+..|+.+. ..+.|...++........+
T Consensus 102 ~I~~~~~dG~-----------------~~~~l~~~~~~--~P~giav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 102 RIEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL-DPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EEEEEETTSC-----------------SCEEEECSSCS--SEEEEEE-EGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEECCCC-----------------cEEEEEeCCCC--CccEEEE-eCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 9999998753 223332 2222 2688888 77655555444 3578888888643322222
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEeccc
Q 021484 187 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
...-...+.++++|++..|..+ ...+.|..+++.+.....+.. ......... . .++.++.+-...+.|..++..++
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gla-v-~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT-L-FEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEE-E-ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEE-E-eCCEEEEEecCCCeEEEEECCCC
Confidence 2223456899999976665544 467889999987644322211 111111111 1 13455566666677777765433
No 256
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.29 E-value=1.9e-05 Score=64.71 Aligned_cols=144 Identities=8% Similarity=0.038 Sum_probs=86.6
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 111 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 111 (312)
.+.++...+++ .+..++.+ |..+|. +++..... ............. ++.+.+.+.++.|
T Consensus 61 ~~~~~~~~~~g--~l~v~t~~--l~~~d~-~g~~~~~~---------------~~~~~~~~~~~~~-~~~l~v~t~~~~l 119 (330)
T 3hxj_A 61 IECRPSIGKDG--TIYFGSDK--VYAINP-DGTEKWRF---------------DTKKAIVSDFTIF-EDILYVTSMDGHL 119 (330)
T ss_dssp EEECCEETTTT--EECCSSCE--EEEECC-CGGGGGGS---------------CC-----CCEEEE-TTEEEEECTTSEE
T ss_pred cccceEEecCC--cEEEecCc--EEEECC-CCcEEEEE---------------ECCCCcccCceEE-CCEEEEEecCCEE
Confidence 45667776666 45555554 888886 44422111 0011111122222 5555555568999
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCcc
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH 191 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 191 (312)
..+|.. + +....+..... .+.++.. .+++. +..++.++.|..+|.. ++.+..+.....
T Consensus 120 ~~~d~~-g----------------~~~~~~~~~~~--~~~~~~~-~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 120 YAINTD-G----------------TEKWRFKTKKA--IYATPIV-SEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp EEECTT-S----------------CEEEEEECSSC--CCSCCEE-CTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred EEEcCC-C----------------CEEEEEcCCCc--eeeeeEE-cCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 999987 5 34444433332 2556665 55665 5667788999999998 877767665556
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEccCCCC
Q 021484 192 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 192 ~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
.+.++...+++.+++.. +.|..+| .++
T Consensus 178 ~~~~~~~d~~g~l~v~t---~~l~~~d-~~g 204 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS---DKVYAIN-PDG 204 (330)
T ss_dssp CCSCCEECTTCCEEEES---SSEEEEC-TTS
T ss_pred ceeeeEEcCCCEEEEEe---CEEEEEC-CCC
Confidence 67777787787765544 8899999 443
No 257
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.24 E-value=4e-05 Score=69.65 Aligned_cols=55 Identities=11% Similarity=0.034 Sum_probs=44.0
Q ss_pred CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 169 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 169 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
+|.|..||+.+++.+-.++.+. ++..-.+...+..++.++.|+.|+.||.++++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 4889999999999888776553 333345566788888999999999999999874
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.00046 Score=56.01 Aligned_cols=225 Identities=11% Similarity=0.013 Sum_probs=123.3
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC-
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND- 108 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d- 108 (312)
.....++|++++ +++++-..++.|..||...... .. ......+..+++.++|+++++. ..
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~~~---------------~~--~~~~~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDGNQQ---------------IH--ATVEGKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTCCEE---------------EE--EECSSEEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCCceE---------------EE--EeCCCCceeEEEcCCCcEEEEeccCC
Confidence 346789999988 6777777889999998765321 00 0112457899999999977664 32
Q ss_pred C-cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCee-EEEe
Q 021484 109 E-LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLM 186 (312)
Q Consensus 109 ~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~ 186 (312)
+ .|..++..++ +. ..+...........++. .+.+..+++-...+.|+++|..+++. +...
T Consensus 94 ~~~v~~~d~~~g----------------~~-~~~~~~~~~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~ 155 (306)
T 2p4o_A 94 SIPVVSLVKSDG----------------TV-ETLLTLPDAIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLE 155 (306)
T ss_dssp SCEEEEEECTTS----------------CE-EEEEECTTCSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEcCCCC----------------eE-EEEEeCCCccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEE
Confidence 2 4777776665 22 22221111112345554 45555555555688999999876532 2111
Q ss_pred e---------cCccceEEEEEcCCCCeEE-EEeCCCcEEEccCCC-CCCCCCCCCh-hhhhhhhccCCCCceeEEecCCc
Q 021484 187 V---------GDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMP-TDFPPLPDNA-EKIMKANKQGREDHSRITLTPDV 254 (312)
Q Consensus 187 ~---------~~~~~v~~~~~~p~~~~l~-t~~~d~~i~iwd~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~ 254 (312)
. ..-...+.+ +|+++.|. +-...+.|..+++.. +.+....... .....-....+++.+.++....+
T Consensus 156 ~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 156 HPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYN 233 (306)
T ss_dssp CGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTC
T ss_pred CCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCC
Confidence 1 011234555 78887654 445678999999875 3221110000 00112223445677777777777
Q ss_pred eEEEEEecccCccce--eEee-cCCCccCCC---CCCCeEEEeecC
Q 021484 255 IMHVLRLQRRQTLAY--RERR-YNAADFESD---EEEGETYLLGFS 294 (312)
Q Consensus 255 ~i~i~~~~~~~~~~~--~~~~-~~~~~~~~~---~~~~~v~~~~~~ 294 (312)
.|.+++.. ...... .... .....+... .+.+.+|+.+..
T Consensus 234 ~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 234 SVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 78887743 211111 0100 112333333 455678888764
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.19 E-value=0.00082 Score=55.71 Aligned_cols=196 Identities=11% Similarity=-0.004 Sum_probs=112.1
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-ND 108 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d 108 (312)
...+|.+..+.. .|+.+. ...|+..++..... ..+ ......+..++|++... ++.+- ..
T Consensus 34 d~~~C~~~~~~~--~ll~~~-~~~I~~i~~~g~~~---------------~~~-~~~~~~~~~l~~d~~~~~ly~~D~~~ 94 (349)
T 3v64_C 34 DRRSCKALGPEP--VLLFAN-RIDIRQVLPHRSEY---------------TLL-LNNLENAIALDFHHRRELVFWSDVTL 94 (349)
T ss_dssp TSSCEEESSSCC--EEEEEC-BSCEEEECTTSCCE---------------EEE-ECSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCcccccccCc--eeEeec-ccceEEEeCCCCee---------------EEe-ecCCCceEEEEEeccccEEEEEeccC
Confidence 345566666633 333332 34577777765431 111 11234578999998665 44443 58
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
+.|+.+++... ........... ....+++ ++ .+++.++-...+.|.+.++........+.
T Consensus 95 ~~I~r~~~~g~----------------~~~~~~~~~~~--~p~glav-d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 95 DRILRANLNGS----------------NVEEVVSTGLE--SPGGLAV-DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp TEEEEEETTSC----------------SCEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CceEEEecCCC----------------CceEEEeCCCC--CccEEEE-ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 88999998764 22222222222 2567888 65 45555666677899999987544333333
Q ss_pred cCccceEEEEEcCCCCeEE-EEeCC-CcEEEccCCCCCCCCCCCChhhhhhhhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 188 GDRHVVNQLEPHPHIPMFA-TCGIE-KTVKLWAPMPTDFPPLPDNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 188 ~~~~~v~~~~~~p~~~~l~-t~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
........++++|.+..|. +-... +.|...++.+.....+....-....-..+.+ ++.+.++-+..+.|..+++...
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3335678999999766544 44444 7888888876543332211111111122343 4566677777788888886643
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.18 E-value=0.00014 Score=65.76 Aligned_cols=202 Identities=9% Similarity=0.020 Sum_probs=104.6
Q ss_pred eEEEEEcCCCCcEEEEEe-CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec--C-
Q 021484 33 LNAIVIDPRNPNYFAVGG-SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--D- 108 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--d- 108 (312)
..++++.+++ .+++.|+ .+..+.+||..+.++.... .... ...-.+++..+++++++.+. +
T Consensus 245 ~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~------------~~~~--~R~~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 245 CPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGP------------DMQV--ARGYQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp SCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECC------------CCSS--CCSSCEEEECTTSCEEEECCCCCS
T ss_pred cccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECC------------CCCc--cccccceEEecCCeEEEEeCcccC
Confidence 3457777888 7888887 4568999999988754221 0001 11112445567888777753 3
Q ss_pred ----CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC---------ceEEEE
Q 021484 109 ----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC---------GHLFIW 175 (312)
Q Consensus 109 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d---------g~v~iw 175 (312)
..+.+||..+.. |..........+.... ....+ ..++..++.++.+ ..+..|
T Consensus 310 ~~~~~~~e~yd~~t~~---------W~~~~~~~~~p~~~~~-----~~~~~-~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSKT---------WTSLPNAKVNPMLTAD-----KQGLY-RSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp SSCCCCEEEEETTTTE---------EEEETTSCSGGGCCCC-----TTGGG-TTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred CcccccceEeCCCCCc---------ceeCCCcccccccccc-----cccee-ecCCceEEEECCCCcEEEecCccceeee
Confidence 468999987641 1100000000000000 00111 2344444444443 456788
Q ss_pred eccCCeeEEEeecCcc---------ceEEEEEcC-CCCeEEEEeCCC-----------cEEEccCCCCCCCCCC--C-Ch
Q 021484 176 KKKGGKLVRLMVGDRH---------VVNQLEPHP-HIPMFATCGIEK-----------TVKLWAPMPTDFPPLP--D-NA 231 (312)
Q Consensus 176 d~~~~~~~~~~~~~~~---------~v~~~~~~p-~~~~l~t~~~d~-----------~i~iwd~~~~~~~~~~--~-~~ 231 (312)
|..+.........+.. .-.++.|.. ++++++.|+.++ .|.+||+.+.....+. . ..
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~ 454 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF 454 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC
Confidence 8877654433322211 223444543 667788877543 6888998876532211 0 11
Q ss_pred hhhhhhhccCCCCceeEEecCC-----------ceEEEEEeccc
Q 021484 232 EKIMKANKQGREDHSRITLTPD-----------VIMHVLRLQRR 264 (312)
Q Consensus 232 ~~~~~~~~~~~~~~~l~s~~~d-----------~~i~i~~~~~~ 264 (312)
..........+++.+++.++.+ ..+.+||..+.
T Consensus 455 ~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 1111122233467788887754 45788886543
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.12 E-value=0.0015 Score=60.01 Aligned_cols=198 Identities=8% Similarity=-0.037 Sum_probs=113.5
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-ND 108 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d 108 (312)
..+.+++|++.+..++.+-...+.|+.+++....... ....++.........|++.+.+. ++++- ..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-----------~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~ 492 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----------SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL 492 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-----------ceeEEEecCCCCcceeeeeecCCcEEEEecCC
Confidence 3567899998664677777777889888887532100 01111122234566889988775 44443 58
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEec-c-CceEEEEeccCCeeEEE
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS-D-CGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~-~-dg~v~iwd~~~~~~~~~ 185 (312)
+.|.+.++... ....+. .... ....|++ +|...+|+... . .+.|...++........
T Consensus 493 ~~I~v~~ldG~-----------------~~~~l~~~~l~--~P~gIaV-Dp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 493 GTVSVADTKGV-----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp TEEEEEETTSS-----------------SEEEEEECTTC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred CeEEEEeCCCC-----------------eEEEEEeCCCC--CcceEEE-ecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 89999998764 333332 2222 2788998 77755555443 3 37899999874444333
Q ss_pred eecCccceEEEEEcCCCCeEEEEe-CCCcEEEccCCCCCCCCCCCC---hhhhhhhhccCCCCceeEEecCCceEEEEEe
Q 021484 186 MVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPDN---AEKIMKANKQGREDHSRITLTPDVIMHVLRL 261 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~ 261 (312)
+...-.....|++++.+..|..+. ....|...++.+.....+... ....+.+.. .++.++++-...+.|...+.
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEET
T ss_pred EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeC
Confidence 333335788999998777655554 567899999877654332111 011111111 13345555556666665553
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.00 E-value=0.00061 Score=55.22 Aligned_cols=161 Identities=10% Similarity=0.072 Sum_probs=104.6
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccc--cCCCccEEEEEE---ccCCCeEEEec
Q 021484 33 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI--GKNNIHITGLAY---SNTSELLISYN 107 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~---~~~~~~l~s~~ 107 (312)
.-+++|++....++++.-..++|..|+...+..... ....+. ......+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~----------~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV----------VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE----------CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE----------ecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 457899986644555555799999999875532110 011100 011224579999 68887777532
Q ss_pred --------------CCcEEEEEcC---CCcCCCCCcCCcccccCCCCCceEe--ccc---------CCceeeEEEEecCC
Q 021484 108 --------------DELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYS--GHR---------NSQTVKGVNFFGPN 159 (312)
Q Consensus 108 --------------d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~v~~v~~~s~~ 159 (312)
+..|..||+. ++ +.+.... ... .......++. .++
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg----------------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav-D~~ 147 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENS----------------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ-DRD 147 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTC----------------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEE-CTT
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCC----------------CEEEEecCccccccccccccccccCCceeEE-CCC
Confidence 5679999998 55 3433322 110 1112778888 999
Q ss_pred CCEEEEeccC-ceEEEEeccCCeeEEEeecC------ccceEEEEEcCCCCeEEEEeCCCcEEEccCCC
Q 021484 160 DEYVMSGSDC-GHLFIWKKKGGKLVRLMVGD------RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 160 ~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 221 (312)
|+..++++.. +.|...+.... .+..+... ....+.++++|++..|++....+.|.-+|+..
T Consensus 148 GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 148 GNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 9999989888 88888887643 33333211 12367899999999988887799999999873
No 263
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.00 E-value=0.0044 Score=55.51 Aligned_cols=196 Identities=9% Similarity=-0.036 Sum_probs=111.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
...+++|++.+..++.+-...+.|..+++.... ....+..........+++.+.+. ++++- ..+
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--------------~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~ 106 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--------------SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN 106 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--------------ceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCC
Confidence 467899999774666666667889888887542 01111122224678999998665 44443 488
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEec--cCceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~ 186 (312)
.|.+.++... ..+.+. .... ....+++ +|.+.+|+... ..+.|...++.........
T Consensus 107 ~I~v~~~dG~-----------------~~~~l~~~~l~--~P~~Iav-dp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 107 RIEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL-DPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEEETTSC-----------------SCEEEECSSCS--CCCCEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEECCCC-----------------CEEEEEeCCCC--CCceEEE-ecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 9999998764 333333 2222 2678988 77655554443 2467777777643333333
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 187 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
...-...+.+++++++..|..+ ...+.|...++.+.....+.. ......... .. ++...++-...+.|...+..+
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~-~~-~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT-LF-EDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEE-ES-SSEEEEECTTTCSEEEEESSS
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEE-Ee-CCEEEEecCCCCEEEEEECCC
Confidence 2334567899999976665544 466789999988754333321 111111111 11 234555655666666666543
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.00 E-value=3e-05 Score=70.53 Aligned_cols=199 Identities=8% Similarity=-0.038 Sum_probs=107.2
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCC-CeEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~-~d~ 109 (312)
.+.+++|++.+..++++-...+.|+.+++...... . ....++.........|++.+.+ .++++- ..+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~-----~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~ 475 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 475 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------C-----CCCCBCCSCC--CCCEECCCSSSBCEECCTTTS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------c-----ceEEEEeCCCCCcceEEEEeeCCcEEEEeccCC
Confidence 45688999876455555566788999998751100 0 0001111111234567887544 455553 578
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc--CceEEEEeccCCeeEEEee
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~ 187 (312)
.|.++++... ....+.... ......+++ +|.+.+|+.+.. .+.|..+++........+.
T Consensus 476 ~I~v~d~dg~-----------------~~~~l~~~~-~~~P~giav-Dp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 476 TVSVADTKGV-----------------KRKTLFREQ-GSKPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CEEEEBSSSC-----------------CEEEECCCS-SCCCCCEEC-CSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eEEEEecCCC-----------------ceEEEEeCC-CCCcceEEE-ccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 8999998654 222222111 122577888 776665555443 2688888876433222222
Q ss_pred cCccceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCCCCCCCCC---hhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 188 GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPPLPDN---AEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 188 ~~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
..-...+.|+|+|++.. +++-...+.|..+++.+.....+... ......+. . ....++++-...+.|..++..
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla-v-d~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-V-FEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE-E-ETTEEEEECSTTTCEEEEETT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE-E-ECCEEEEEeCCCCeEEEEEcc
Confidence 22345678999997655 44545677899999876443222111 11111111 1 123555666666777777643
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.00 E-value=0.0016 Score=60.37 Aligned_cols=163 Identities=14% Similarity=0.141 Sum_probs=106.1
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccc-cccCCCccEEEEEEccCCCeEEEecC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRH-LIGKNNIHITGLAYSNTSELLISYND 108 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~d 108 (312)
...|.++...+++ .|..|+.++-|..|+..+..... +.... ...-....|.++...++|.+.++..+
T Consensus 309 ~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~----------~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~ 376 (795)
T 4a2l_A 309 QRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFKN----------IRNIPYKNSLSDNVVSCIVEDKDKNLWIGTND 376 (795)
T ss_dssp SSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSEE----------ECCCTTSSSCSCSSEEEEEECTTSCEEEEESS
T ss_pred CCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccceE----------EcCCCCCCCCCCCeeEEEEECCCCCEEEEECC
Confidence 4579999999987 35667777788889876553110 00000 00112456999999999998887777
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc-------cCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCe
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-------RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 181 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 181 (312)
+-|..|+..++ ....+... .....|.++.. +++++.|..|+.++-|..+|..+++
T Consensus 377 ~Gl~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 377 GGLNLYNPITQ-----------------RFTSYTLQEDESARGIGSNNIKAVYV-DEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp SCEEEECTTTC-----------------CEEEECCC------CCSCSCEEEEEE-ETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CCeEEEcCCCC-----------------cEEEEecCCCCcccCCCCccEEEEEE-cCCCCEEEEEeCcCceeEEeCCCCc
Confidence 78999987654 11222100 01133888887 7788756667777789999988776
Q ss_pred eEEEee----cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 182 LVRLMV----GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 182 ~~~~~~----~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
...... .....|.++...+++.+.+... +-|.+|+..++..
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSF 483 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEE
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeE
Confidence 433221 1245789999888888765543 4588899877653
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.0026 Score=51.88 Aligned_cols=180 Identities=12% Similarity=0.029 Sum_probs=101.0
Q ss_pred CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCCcc
Q 021484 53 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPE 130 (312)
Q Consensus 53 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~ 130 (312)
..|+..|+.+.+.. .+ ......+..++|++.+. ++.+- ..+.|+.+++.+....
T Consensus 10 ~~I~~i~~~~~~~~---------------~~-~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~-------- 65 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT---------------SL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-------- 65 (316)
T ss_dssp SSEEEEETTSCCCE---------------EE-ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------
T ss_pred CeEEEEECCCcceE---------------eh-hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC--------
Confidence 56888888866421 11 11234578999998765 44453 4789999998751000
Q ss_pred cccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe
Q 021484 131 DLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~ 209 (312)
......+..... ....+++ ++ .+++.++-...+.|.++++........+.........++++|.+..|..+.
T Consensus 66 ----~~~~~~~~~~~~--~p~glav-d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 66 ----SSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ------CEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred ----cccEEEEeCCCC--CcCEEEE-eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 011112221112 2578888 65 445555667788999999875443333333335678999999777654444
Q ss_pred C-C-CcEEEccCCCCCCCCCC-CChhhhhhhhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 210 I-E-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 210 ~-d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
. . +.|...++.+.....+. ...... .-..+.+ ++.+.++-+..+.|..+++...
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~~~~~~P-~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCeEEEEcCCCCCeEEEEECCCCCc-eEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 3 2 67888887654322211 011111 1122333 4556667777788888887643
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.97 E-value=0.0019 Score=54.36 Aligned_cols=193 Identities=10% Similarity=-0.008 Sum_probs=108.9
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCCc
Q 021484 33 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDEL 110 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~ 110 (312)
-+|.+..+.. .|+.+ ....|+..++..... ..+ ......+..++|++.+. ++.+- ..+.
T Consensus 79 ~~C~~~~~~~--~l~~~-~~~~I~~i~~~~~~~---------------~~~-~~~~~~~~gl~~d~~~~~ly~~D~~~~~ 139 (386)
T 3v65_B 79 RSCKALGPEP--VLLFA-NRIDIRQVLPHRSEY---------------TLL-LNNLENAIALDFHHRRELVFWSDVTLDR 139 (386)
T ss_dssp SCEEECSSCC--EEEEE-CBSCEEEECTTSCCC---------------EEE-ECSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CeECCccccc--eeEee-cCccceeeccCCCcE---------------EEE-ecCCCccEEEEEecCCCeEEEEeCCCCc
Confidence 3455555532 33333 335677777765431 111 11234578999998665 44453 5888
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC-CCEEEEeccCceEEEEeccCCeeEEEeecC
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 189 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 189 (312)
|+.+++... .....+..... ....+++ ++. +.+.++-...+.|.+.++........+...
T Consensus 140 I~r~~~~g~----------------~~~~~~~~~~~--~p~glav-d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~ 200 (386)
T 3v65_B 140 ILRANLNGS----------------NVEEVVSTGLE--SPGGLAV-DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS 200 (386)
T ss_dssp EEEEETTSC----------------CEEEEECSSCS--CCCCEEE-ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS
T ss_pred EEEEecCCC----------------CcEEEEeCCCC--CccEEEE-EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC
Confidence 999998764 22222221221 2567887 654 555566667789999998754433333333
Q ss_pred ccceEEEEEcCCCCeEEEEe-CC-CcEEEccCCCCCCCCCCC-ChhhhhhhhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 190 RHVVNQLEPHPHIPMFATCG-IE-KTVKLWAPMPTDFPPLPD-NAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 190 ~~~v~~~~~~p~~~~l~t~~-~d-~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
......++++|.+..|..+. .. +.|..+++.+.....+.. ..... .-..+.+ ++.+.++-+..+.|..+++...
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P-nGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP-NGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE-EEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe-eeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 35678999999777655444 44 678888877654322211 11111 1122332 4556677777777887776543
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.0009 Score=57.18 Aligned_cols=154 Identities=13% Similarity=0.176 Sum_probs=95.5
Q ss_pred ceEEEEEcC-CCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEec-C
Q 021484 32 RLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISYN-D 108 (312)
Q Consensus 32 ~v~~~~~~p-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~-d 108 (312)
....++++| ++ ..|+.+...+.|+.+|+..+.+. .+ .........++|+++|+ ++++.. +
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~---------------~~-~~~~~~P~~ia~d~~G~~lyvad~~~ 200 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVS---------------TV-YSGLSKVRTICWTHEADSMIITNDQN 200 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEE---------------EE-ECCCSCEEEEEECTTSSEEEEEECCS
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEE---------------EE-ecCCCCcceEEEeCCCCEEEEEeCCC
Confidence 457889998 34 34555444488999998876531 11 11245578999999998 455532 2
Q ss_pred C----cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeE
Q 021484 109 E----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 109 ~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
+ .+.+++..... .....+.... ....+++ +| ++.++++-...+.|..++..++...
T Consensus 201 ~~~~~~v~~~~~~g~~---------------~~~~~l~~~~---~p~giav-dp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 201 NNDRPNNYILTRESGF---------------KVITELTKGQ---NCNGAET-HPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp CTTSEEEEEEEGGGTS---------------CSEEEEEECS---SCCCEEE-CTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCce---------------eeeeeeccCC---CceEEEE-eCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 2 24444443220 1112232221 2577888 88 6777777777899999999877643
Q ss_pred EEeec-CccceEEEEEcCCCCe-EEEEeCCCcEEEccCCC
Q 021484 184 RLMVG-DRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMP 221 (312)
Q Consensus 184 ~~~~~-~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~ 221 (312)
..... .......++|+|++++ +++-...+.|..++...
T Consensus 262 ~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 262 PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 22222 2235678999999995 45555678899987654
No 269
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.92 E-value=0.0054 Score=55.00 Aligned_cols=193 Identities=9% Similarity=-0.038 Sum_probs=114.2
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 109 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~ 109 (312)
.+.+++|++.+..++.+-..++.|+.+++..... ..+..........+++.+.+. ++.+- ..+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~---------------~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSAL---------------EHVVEFGLDYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------------EEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc---------------EEEEeCCCCCcceEEEEeCCCEEEEEECCCC
Confidence 5779999997756777777789999998875431 111111123456888887665 44443 478
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEec--cCceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~ 186 (312)
.|.+.++... ....+. .... ....+++ +|...+|+... ..+.|...++..... ..+
T Consensus 103 ~I~v~~~dG~-----------------~~~~l~~~~l~--~P~~iav-dp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l 161 (628)
T 4a0p_A 103 RIEVSKLDGQ-----------------HRQVLVWKDLD--SPRALAL-DPAEGFMYWTEWGGKPKIDRAAMDGSER-TTL 161 (628)
T ss_dssp EEEEEETTST-----------------TCEEEECSSCC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSC-EEE
T ss_pred EEEEEecCCC-----------------cEEEEEeCCCC--CcccEEE-ccCCCeEEEeCCCCCCEEEEEeCCCCce-EEE
Confidence 8999998754 223332 2222 2688998 77555555443 357888888874443 333
Q ss_pred ecCccceEEEEEcCCCCeEEEE-eCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCCceEEEEEec
Q 021484 187 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 262 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~ 262 (312)
...-.....+++++++..|..+ ...+.|...++.+.....+............ .++.+.++-...+.|...+..
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav--~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ--YQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEE--ECCEEEEecCCCCEEEEEECC
Confidence 3344567899999987765555 4667899999876543221111111111111 124455565556666666643
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.91 E-value=0.0048 Score=52.13 Aligned_cols=182 Identities=12% Similarity=0.026 Sum_probs=104.8
Q ss_pred CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCC
Q 021484 51 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLS 128 (312)
Q Consensus 51 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~ 128 (312)
....|+..++...... .+ ......+..++|++.+. ++.+- ..+.|+.+++......
T Consensus 90 ~~~~I~~i~l~~~~~~---------------~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------ 147 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYT---------------SL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------ 147 (400)
T ss_dssp ETTEEEEECTTSCSCE---------------EE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------
T ss_pred ccceeEEEccCCccee---------------Ee-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------
Confidence 3478888888755311 11 12245678999998665 44443 5788999988652000
Q ss_pred cccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEE
Q 021484 129 PEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 207 (312)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t 207 (312)
......+..... ....+++ ++ .+++.++-...+.|.+.++........+.........++++|.+..|..
T Consensus 148 ------~~~~~~~~~~~~--~p~glav-D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 148 ------SSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp ------CCCEEEECSSCS--CEEEEEE-ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred ------CcceEEEeCCCC--CcccEEE-EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 011122221222 2678888 65 5666666677889999998865544444434456789999997766554
Q ss_pred Ee--CCCcEEEccCCCCCCCCCCC-ChhhhhhhhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 208 CG--IEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 208 ~~--~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.. ..+.|...++.+.....+.. ..... .-..+.+ ++.+.++-+....|..+++...
T Consensus 219 td~~~~~~I~~~~~dG~~~~~~~~~~l~~P-~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EECSSSCCEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EeCCCCCEEEEEeCCCCccEEEEECCCCce-EEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 44 24788888887654322211 11111 1112333 4556667677778888887654
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.89 E-value=0.0011 Score=58.75 Aligned_cols=107 Identities=10% Similarity=-0.030 Sum_probs=67.5
Q ss_pred CCCC---EEEEeccCceEEEEeccCCeeEEEeecCc-------------cce--------------------------EE
Q 021484 158 PNDE---YVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV--------------------------NQ 195 (312)
Q Consensus 158 ~~~~---~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~v--------------------------~~ 195 (312)
.+|+ .++.++.+|.++++|..+++.+...+... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 3664 57788999999999999999877654221 111 23
Q ss_pred EEEcCCCCeEEEEe-------------------------------------CCCcEEEccCCCCCCC-CCCCChhhhhhh
Q 021484 196 LEPHPHIPMFATCG-------------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIMKA 237 (312)
Q Consensus 196 ~~~~p~~~~l~t~~-------------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~~~ 237 (312)
++++|+...+.... .++.|..||+.+++.. .+. .......
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~-~~~~~~~- 468 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKW-EKFAAWG- 468 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEE-ESSCCCS-
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEec-CCCCccc-
Confidence 57788777765543 3478999999887631 111 1111111
Q ss_pred hccCCCCceeEEecCCceEEEEEecccCc
Q 021484 238 NKQGREDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 238 ~~~~~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
......+..++.++.|+.++.+|.++...
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 11122345677789999999999877643
No 272
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.85 E-value=0.0067 Score=56.13 Aligned_cols=165 Identities=7% Similarity=0.044 Sum_probs=105.1
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
...|.++...+++ . |..|+.+ -|.+|+..+++......... ....-....|.++...++|.+-+++.++
T Consensus 262 ~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~--------~~~~l~~~~i~~i~~D~~g~lWigt~~~ 330 (795)
T 4a2l_A 262 SNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNPV--------ENGSLSQRSVRSIFMDSQGGMWLGTYFG 330 (795)
T ss_dssp CSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCTT--------STTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred CCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCCC--------CCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence 3569999999887 4 4445555 58889987765321100000 0001124579999999999988877778
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEec-----ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-----HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 184 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 184 (312)
-|..|+..+. ....+.. ......|.++.. +.++++ ..|+.++-|..|+..+++...
T Consensus 331 Gl~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~V~~i~~-d~~g~l-WiGt~~~Gl~~~~~~~~~~~~ 391 (795)
T 4a2l_A 331 GLNYYHPIRN-----------------RFKNIRNIPYKNSLSDNVVSCIVE-DKDKNL-WIGTNDGGLNLYNPITQRFTS 391 (795)
T ss_dssp CEEEECGGGG-----------------SSEEECCCTTSSSCSCSSEEEEEE-CTTSCE-EEEESSSCEEEECTTTCCEEE
T ss_pred CeEEeCCCcc-----------------cceEEcCCCCCCCCCCCeeEEEEE-CCCCCE-EEEECCCCeEEEcCCCCcEEE
Confidence 8888887653 1111211 001123888887 777764 457777789999988765433
Q ss_pred Eeec--------CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 185 LMVG--------DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 185 ~~~~--------~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.... ....|.++...+++..|-.|+.++-|..||..++..
T Consensus 392 ~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 392 YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 2211 135688999888888455566667799999887654
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.83 E-value=0.00052 Score=63.09 Aligned_cols=112 Identities=9% Similarity=0.007 Sum_probs=73.5
Q ss_pred cEEEEEEc-cCCCeEEEe-c-CC----cEEEEEcCCC-cCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCC
Q 021484 90 HITGLAYS-NTSELLISY-N-DE----LVYLFEKNMG-LGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE 161 (312)
Q Consensus 90 ~i~~~~~~-~~~~~l~s~-~-d~----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~ 161 (312)
.+...+|| |+|++|+.+ . +| .|+++|+.++ . .....+.. ....++| +|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~---------------~l~~~~~~-----~~~~~~W-spDg~ 233 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ---------------TIADKVSG-----TNGEIVW-GPDHT 233 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC---------------CCCCCEEE-----ECSCCEE-CSSTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE---------------eCCccccC-----ceeeEEE-ecCCC
Confidence 67889999 999977754 2 33 4999999775 2 11111211 1346788 99998
Q ss_pred EEEEeccC-----ceEEEEeccCCee--EEEeec-CccceEEEEEcCCCCeEEEEe---CCCcEEEccCCCC
Q 021484 162 YVMSGSDC-----GHLFIWKKKGGKL--VRLMVG-DRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPT 222 (312)
Q Consensus 162 ~l~~~~~d-----g~v~iwd~~~~~~--~~~~~~-~~~~v~~~~~~p~~~~l~t~~---~d~~i~iwd~~~~ 222 (312)
.|+....+ ..|+.+++.+++. ...+.. .......+.|+|+|++|+..+ ....|.++|+.+.
T Consensus 234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88776654 3688888877642 233322 223456789999999876655 2346888888765
No 274
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.77 E-value=0.0098 Score=53.33 Aligned_cols=180 Identities=9% Similarity=-0.072 Sum_probs=103.9
Q ss_pred CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCe-EEEe-cCCcEEEEEcCCCcCCCCCcCC
Q 021484 51 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LISY-NDELVYLFEKNMGLGPSPLSLS 128 (312)
Q Consensus 51 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~ 128 (312)
....|+..++.+... ...+....-..+..++|++.+.. +.+- .++.|+.+++...
T Consensus 13 ~~~~I~~i~l~~~~~--------------~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--------- 69 (628)
T 4a0p_A 13 RRADIRRISLETNNN--------------NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS--------- 69 (628)
T ss_dssp ETTEEEEEESSCTTC--------------EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------
T ss_pred eCCcEEEEECCCCCc--------------ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---------
Confidence 557899899875431 01111112345789999997664 4443 5889999998754
Q ss_pred cccccCCCCCceEecccCCceeeEEEEecCC-CCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEE
Q 021484 129 PEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 207 (312)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t 207 (312)
.....+..... ....+++ ++. +++.++-...+.|.+.++........+...-.....++++|....|..
T Consensus 70 -------~~~~v~~~g~~--~P~GlAv-D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 70 -------ALEHVVEFGLD--YPEGMAV-DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYW 139 (628)
T ss_dssp -------SCEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEE
T ss_pred -------CcEEEEeCCCC--CcceEEE-EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEE
Confidence 22222221112 2677887 654 455566667789999998754332223233356789999996666554
Q ss_pred Ee--CCCcEEEccCCCCCCCCCCCChhhhhhhhccCC-CCceeEEecCCceEEEEEeccc
Q 021484 208 CG--IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 208 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.. ..+.|...++.+.....+.......... .... ++.+.++-...+.|...++...
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~Gl-alD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVPNVGRANGL-TIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSCSSEEEE-EEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eCCCCCCEEEEEeCCCCceEEEECCCCCcceE-EEccccCEEEEEECCCCEEEEEcCCCC
Confidence 44 3567877877765543222111111111 1233 3556666677777887777554
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.75 E-value=0.002 Score=55.01 Aligned_cols=153 Identities=12% Similarity=0.135 Sum_probs=92.4
Q ss_pred ceEEEEEcCC--CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCC
Q 021484 32 RLNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 32 ~v~~~~~~p~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
....++|+|+ +.+++++ ...+.|+.+++.++++.. + .........++++++|.++++...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~---------------~-~~~~~~P~giavd~dG~lyVad~~~ 202 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDI---------------K-TTNIGQCADVNFTLNGDMVVVDDQS 202 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEE---------------E-CCCCSCEEEEEECTTCCEEEEECCS
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEE---------------e-ecCCCCccEEEECCCCCEEEEcCCC
Confidence 4678999995 3244444 333899999998776321 1 1123457899999999966664321
Q ss_pred -----cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeE
Q 021484 110 -----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 110 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
.+..++..... .....+. ... ....+++ ++ ++.+.++-..++.|+.++..++...
T Consensus 203 ~~~~~gv~~~~~~~~~---------------~~~~~~~-~~~--~P~giav-d~~~G~lyv~d~~~~~V~~~d~~~g~~~ 263 (433)
T 4hw6_A 203 SDTNTGIYLFTRASGF---------------TERLSLC-NAR--GAKTCAV-HPQNGKIYYTRYHHAMISSYDPATGTLT 263 (433)
T ss_dssp CTTSEEEEEECGGGTT---------------CCEEEEE-ECS--SBCCCEE-CTTTCCEEECBTTCSEEEEECTTTCCEE
T ss_pred CcccceEEEEECCCCe---------------ecccccc-ccC--CCCEEEE-eCCCCeEEEEECCCCEEEEEECCCCeEE
Confidence 13333332210 0001222 111 2567888 78 6766666667889999999877663
Q ss_pred EEe-ec-CccceEEEEEcCCCCe-EEEEeCCCcEEEccCC
Q 021484 184 RLM-VG-DRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPM 220 (312)
Q Consensus 184 ~~~-~~-~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~ 220 (312)
..+ .. .......++|+|+++. +++-...+.|+.+++.
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 333 21 1223356999999995 4455567889997765
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.0095 Score=54.99 Aligned_cols=160 Identities=12% Similarity=0.073 Sum_probs=101.9
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
...|.++...+++ . |..|+.++-+..++..+++.... ... ......|.++...++|.+.+++. +
T Consensus 406 ~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~----------~~~---~~~~~~v~~i~~d~~g~lwigt~-~ 469 (781)
T 3v9f_A 406 SNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLKKFQII----------ELE---KNELLDVRVFYEDKNKKIWIGTH-A 469 (781)
T ss_dssp CSBEEEEEECTTS-C-EEEEETTEEEEEECSSSCEEEEC----------CST---TTCCCCEEEEEECTTSEEEEEET-T
T ss_pred CcceEEEEECCCC-C-EEEEeccCCEEEEcCCCCcEEEe----------ccC---CCCCCeEEEEEECCCCCEEEEEC-C
Confidence 4578999988877 4 44567667788899877653211 000 11245788999888888776665 6
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc----CCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
-|..|+..++ +. ..+.... ....|.++.. ++++.+.+ |+.++-|..+|..+++.. .
T Consensus 470 Gl~~~~~~~~----------------~~-~~~~~~~~~~~~~~~i~~i~~-d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~ 529 (781)
T 3v9f_A 470 GVFVIDLASK----------------KV-IHHYDTSNSQLLENFVRSIAQ-DSEGRFWI-GTFGGGVGIYTPDMQLVR-K 529 (781)
T ss_dssp EEEEEESSSS----------------SC-CEEECTTTSSCSCSCEEEEEE-CTTCCEEE-EESSSCEEEECTTCCEEE-E
T ss_pred ceEEEeCCCC----------------eE-EecccCcccccccceeEEEEE-cCCCCEEE-EEcCCCEEEEeCCCCeEE-E
Confidence 6889998765 22 1221111 0133888887 77777655 444445778998766543 3
Q ss_pred eec----CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCC
Q 021484 186 MVG----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP 226 (312)
Q Consensus 186 ~~~----~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~ 226 (312)
+.. ....|.++...++|.+.++.. +|.|..||..+.+...
T Consensus 530 ~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 530 FNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV 573 (781)
T ss_dssp ECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEE
T ss_pred ccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEE
Confidence 321 134688998888888765554 6665899988776533
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.0047 Score=53.28 Aligned_cols=163 Identities=15% Similarity=0.239 Sum_probs=94.3
Q ss_pred ceEEEEEcCC-CCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEE-------ccCCC-e
Q 021484 32 RLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-------SNTSE-L 102 (312)
Q Consensus 32 ~v~~~~~~p~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-~ 102 (312)
....|+|+|. +.+++++-...+.|++.|+.++.+.... . .-.........|+| +++|. +
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~----------~--~~~~~~~~p~~ia~~~~~~~~d~~G~~l 207 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPL----------N--INTIPTNRIRSIAFNKKIEGYADEAEYM 207 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEE----------C--CTTSSCSBEEEEEECCCBTTTBCTTCEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEE----------c--cCccccCCCcEEEEeecccccCCCCCEE
Confidence 3568999994 4356666555577999998877642110 0 00112345889999 99998 4
Q ss_pred EEEec-CC------cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEeccCceEEE
Q 021484 103 LISYN-DE------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFI 174 (312)
Q Consensus 103 l~s~~-d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~~~dg~v~i 174 (312)
+++.. ++ .|.+++..... . +......+.+.... ....++. +| ++.++++-..++.|+.
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G-~---------~~~~~~~~~v~~~~---~p~giav-dp~~g~LYvtd~~~g~V~r 273 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADG-T---------FDDRSDIQLIAAYK---QCNGATI-HPINGELYFNSYEKGQVFR 273 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTS-C---------CSTTSCEEEEEEES---CCCCEEE-CTTTCCEEEEETTTTEEEE
T ss_pred EEEeCCCCCcccCceEEEEecCCCC-c---------eeecccceeeccCC---CceEEEE-cCCCCeEEEEECCCCEEEE
Confidence 44443 32 26666644310 0 00000002222211 1456777 77 4555667778889999
Q ss_pred Eecc-------CCee-----------EEE-ee-cCccceEEEEEcCCCCe-EEEEeCCCcEEEccCC
Q 021484 175 WKKK-------GGKL-----------VRL-MV-GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPM 220 (312)
Q Consensus 175 wd~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~ 220 (312)
+|+. ++.. ... +. ......+.++|+|+++. +++-.....|+.++..
T Consensus 274 ~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 274 LDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp ECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 9987 5543 122 22 12345678999999996 4444567788886643
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.70 E-value=0.00051 Score=62.48 Aligned_cols=160 Identities=11% Similarity=-0.009 Sum_probs=89.5
Q ss_pred cEEEEEEccCCCeEEEe--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecC-CCCEEEEe
Q 021484 90 HITGLAYSNTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSG 166 (312)
Q Consensus 90 ~i~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~-~~~~l~~~ 166 (312)
.+..++|.+.+..|..+ ..+.|+.+++.+.... ......+.... .....+++ ++ .++++++-
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------------~~~~~~i~~~~--~~P~glav-D~~~g~LY~tD 471 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------SSYDTVISRDI--QAPDGLAV-DWIHSNIYWTD 471 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------------CCCCCBCCSCC----CCCEEC-CCSSSBCEECC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------------cceEEEEeCCC--CCcceEEE-EeeCCcEEEEe
Confidence 45678999877655544 4788999998751000 01111111111 11456777 64 45555555
Q ss_pred ccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-C-CCcEEEccCCCCCCCCCCCChhhhhhhhccCC-C
Q 021484 167 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-I-EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR-E 243 (312)
Q Consensus 167 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (312)
...+.|.++++........+.........++++|.+..|+.+. . .+.|..+++.+.....+....-....-..+.+ .
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS 551 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTT
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccC
Confidence 6678999999875544333333334567899999766544433 2 37888888776543222111101111122443 4
Q ss_pred CceeEEecCCceEEEEEeccc
Q 021484 244 DHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 244 ~~~l~s~~~d~~i~i~~~~~~ 264 (312)
+.+.++-+....|..+++...
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSS
T ss_pred CEEEEEecCCCeEEEEccCCC
Confidence 566777777788888887543
No 279
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.69 E-value=0.001 Score=60.24 Aligned_cols=56 Identities=9% Similarity=-0.029 Sum_probs=42.6
Q ss_pred cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 168 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 168 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.+|.|..||+.+++.+-....+. ++....+...+.+++.++.|+.|+.||.+++++
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 34889999999999887765433 333334455778888899999999999998874
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.67 E-value=0.016 Score=47.28 Aligned_cols=156 Identities=6% Similarity=-0.020 Sum_probs=95.6
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCC-eEEEe-c-C
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-N-D 108 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~-~-d 108 (312)
....+++.+.+++++.+-...+.|.++++.... ...+..........+++.|.+. ++.+- . .
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---------------~~~l~~~~~~~P~giavdp~~g~ly~td~~~~ 144 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEV 144 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---------------CEEEECSSCSSEEEEEEEGGGTEEEEEECSSS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---------------EEEEEeCCCCCccEEEEeCCCCEEEEEecCCC
Confidence 355788887554677776777889999987432 1111122345578999998655 44443 2 5
Q ss_pred CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEE-EEeccCceEEEEeccCCeeEEEe
Q 021484 109 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 109 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
+.|..+++... ....+. ... .....+++ ++++..| ++-+..+.|..+|+........+
T Consensus 145 ~~I~r~~~dG~-----------------~~~~~~~~~l--~~Pnglav-d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 204 (318)
T 3sov_A 145 PKIERAGMDGS-----------------SRFIIINSEI--YWPNGLTL-DYEEQKLYWADAKLNFIHKSNLDGTNRQAVV 204 (318)
T ss_dssp CEEEEEETTSC-----------------SCEEEECSSC--SCEEEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CEEEEEEcCCC-----------------CeEEEEECCC--CCccEEEE-eccCCEEEEEECCCCEEEEEcCCCCceEEEe
Confidence 78888887643 222332 222 23688999 7765555 45566789999998743332222
Q ss_pred ecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 187 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 187 ~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
.........+++. .+..+.+-...+.|..++..+++
T Consensus 205 ~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 205 KGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp CSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCC
Confidence 3233456677775 33445555567889999886554
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.66 E-value=0.0015 Score=59.00 Aligned_cols=102 Identities=10% Similarity=-0.059 Sum_probs=59.3
Q ss_pred eEEEEecCCCCEEEEeccCc-----------eEEEEeccCCeeEEEe--ecCccce-EEEEEcCCCCeEEEEeCC-----
Q 021484 151 KGVNFFGPNDEYVMSGSDCG-----------HLFIWKKKGGKLVRLM--VGDRHVV-NQLEPHPHIPMFATCGIE----- 211 (312)
Q Consensus 151 ~~v~~~s~~~~~l~~~~~dg-----------~v~iwd~~~~~~~~~~--~~~~~~v-~~~~~~p~~~~l~t~~~d----- 211 (312)
.++.|...++++++.|+.++ .|.+||..+.+..... ..+..+. .+++..|++++++.|+.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 44544123678888887543 6888888876654432 2222222 345667899999999854
Q ss_pred ------CcEEEccCCCCCCCCCCCC--hhhhhhhhccCCCCceeEEecC
Q 021484 212 ------KTVKLWAPMPTDFPPLPDN--AEKIMKANKQGREDHSRITLTP 252 (312)
Q Consensus 212 ------~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~s~~~ 252 (312)
..+.+||+.+.+...+... ...-...+...++++.++.|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 4689999887653222211 1111111223457778888774
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.61 E-value=0.003 Score=56.16 Aligned_cols=135 Identities=12% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCCC---EEEEeccCceEEEEeccCCeeEEEeecCc-------------cce----------------------------
Q 021484 158 PNDE---YVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV---------------------------- 193 (312)
Q Consensus 158 ~~~~---~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~v---------------------------- 193 (312)
.+|+ .++.++.+|.++++|..+|+.+..+.... .++
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 4663 78889999999999999999886654321 000
Q ss_pred ----EEEEEcCCCCeEEEEe---------------------------------CCCcEEEccCCCCCCC-CCCCChhhhh
Q 021484 194 ----NQLEPHPHIPMFATCG---------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIM 235 (312)
Q Consensus 194 ----~~~~~~p~~~~l~t~~---------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~ 235 (312)
..++++|+...++... .+|.|..||+.++++. ... ......
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~ 489 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHK-EHLPLW 489 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEE-ESSCCC
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEec-CCCCCc
Confidence 1245666655544432 2578999999888641 111 000110
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCccceeEeecCCCc--cCCCCCCCeEEEeecCC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAAD--FESDEEEGETYLLGFSD 295 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~ 295 (312)
. ......+.+++.++.|+.++.+|.++... .+....+.... ...-+.+|+.|+.-.+.
T Consensus 490 ~-g~~~tagglvf~g~~dg~l~A~D~~tG~~-lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 490 A-GVLATAGNLVFTGTGDGYFKAFDAKSGKE-LWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp S-CCEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred c-cceEeCCCEEEEECCCCcEEEEECCCCCE-EEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 0 00112356788899999999999877743 34322221111 01112466677765433
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.60 E-value=0.0075 Score=53.71 Aligned_cols=135 Identities=12% Similarity=0.083 Sum_probs=76.7
Q ss_pred CCC---CEEEEeccCceEEEEeccCCeeEEEeecCc-------------cce--------------------------EE
Q 021484 158 PND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV--------------------------NQ 195 (312)
Q Consensus 158 ~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~v--------------------------~~ 195 (312)
.+| ..++.++.+|.++++|..+|+.+....... .++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 467 567788999999999999999876654211 111 13
Q ss_pred EEEcCCCCeEEEEe---------------------------------------CCCcEEEccCCCCCCC-CCCCChhhhh
Q 021484 196 LEPHPHIPMFATCG---------------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIM 235 (312)
Q Consensus 196 ~~~~p~~~~l~t~~---------------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~ 235 (312)
++++|+..+++... .+|.|..||+.++++. ... ......
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~ 476 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVW 476 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCC
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCcc
Confidence 56677665544321 3467888888887631 110 000010
Q ss_pred hhhccCCCCceeEEecCCceEEEEEecccCccceeEeecCCC--ccCCCCCCCeEEEeecCC
Q 021484 236 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAA--DFESDEEEGETYLLGFSD 295 (312)
Q Consensus 236 ~~~~~~~~~~~l~s~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~ 295 (312)
. ......+..++.++.|+.++.+|.++.. ..|....+... ....-+.+|++|+.-.+.
T Consensus 477 ~-g~~~tagg~vf~gt~dg~l~A~D~~tG~-~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 477 G-GTMATAGDLVFYGTLDGYLKARDSDTGD-LLWKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp S-BCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred C-cceEecCCEEEEECCCCeEEEEECCCCC-EEEEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 0 0011245677889999999999988774 34432222111 111113456677765433
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.59 E-value=0.0046 Score=52.83 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=70.6
Q ss_pred cEEEEEEcc-CCCeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEE-EEe
Q 021484 90 HITGLAYSN-TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSG 166 (312)
Q Consensus 90 ~i~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l-~~~ 166 (312)
....++++| +|.++++. .++.|+.++..++ .....+...........++| +|++++| ++-
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g----------------~~~~~~~~~~~~~~~~~ia~-dpdG~~LYvad 291 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATG----------------TLTEEEVMMDTKGSNFHIVW-HPTGDWAYIIY 291 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTC----------------CEEEEEEECSCCSSCEEEEE-CTTSSEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCC----------------eEEEEEeccCCCCCcccEEE-eCCCCEEEEEe
Confidence 345688999 67766665 5888999998755 22122211111111346998 9999855 455
Q ss_pred ccCceEEEEecc--CCee--EEEeecC---------------ccceEEEEE---------cCCCCeEEEEeCCCcEEEcc
Q 021484 167 SDCGHLFIWKKK--GGKL--VRLMVGD---------------RHVVNQLEP---------HPHIPMFATCGIEKTVKLWA 218 (312)
Q Consensus 167 ~~dg~v~iwd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~p~~~~l~t~~~d~~i~iwd 218 (312)
...+.|+.+++. ++.. ...+.+. -.....+++ .+++.++++-.....|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 567899998865 2321 1122111 123567888 67777777777778999998
Q ss_pred CC
Q 021484 219 PM 220 (312)
Q Consensus 219 ~~ 220 (312)
..
T Consensus 372 ~~ 373 (433)
T 4hw6_A 372 PE 373 (433)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.0054 Score=56.62 Aligned_cols=159 Identities=9% Similarity=0.049 Sum_probs=99.2
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCc
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 110 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~ 110 (312)
..|.++...+++ .|..|+.++-|..|+..++..... .... ......|.++...++|.+.++..++-
T Consensus 363 ~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~----------~~~~--~~~~~~v~~i~~d~~g~lWigt~~~G 428 (781)
T 3v9f_A 363 KVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIYN----------KENR--ELLSNSVLCSLKDSEGNLWFGTYLGN 428 (781)
T ss_dssp SCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEECC-----------------CCCSBEEEEEECTTSCEEEEETTEE
T ss_pred cceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEEc----------cCCC--CCCCcceEEEEECCCCCEEEEeccCC
Confidence 468899988877 355666667788899876542111 0000 12245789999888888887766677
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEec-ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecC
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 189 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 189 (312)
|..++..++ + ...+.. ......|.++.. .+++.+.+ |+. +-|..+|..+++........
T Consensus 429 l~~~~~~~~----------------~-~~~~~~~~~~~~~v~~i~~-d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 429 ISYYNTRLK----------------K-FQIIELEKNELLDVRVFYE-DKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEEECSSSC----------------E-EEECCSTTTCCCCEEEEEE-CTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred EEEEcCCCC----------------c-EEEeccCCCCCCeEEEEEE-CCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 888887654 1 111211 011133888877 77776554 444 56889998876543322212
Q ss_pred -----ccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 190 -----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 190 -----~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
...|.++...++|.+.+.. .++-|..|+..++..
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLV 527 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEE
T ss_pred ccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeE
Confidence 3578899998888876544 334477788776643
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.47 E-value=0.025 Score=45.66 Aligned_cols=148 Identities=8% Similarity=0.017 Sum_probs=83.0
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEccCCe--ecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe--cCC
Q 021484 34 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCH--WYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--NDE 109 (312)
Q Consensus 34 ~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~--~d~ 109 (312)
..++..+.+ ..+++-..++.|..+|..+++ +.... .. ... ......-.....+ +++++.|..+ ..+
T Consensus 120 ~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~----~~--~~~-~~~~~~~~~pngi--s~dg~~lyv~d~~~~ 189 (306)
T 2p4o_A 120 NGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEH----PM--LAR-SNSESVFPAANGL--KRFGNFLYVSNTEKM 189 (306)
T ss_dssp EEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEEC----GG--GSC-SSTTCCSCSEEEE--EEETTEEEEEETTTT
T ss_pred CcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEEC----Cc--ccc-ccccCCCCcCCCc--CcCCCEEEEEeCCCC
Confidence 344444544 455555568888888876542 11000 00 000 0001111234455 7888754443 488
Q ss_pred cEEEEEcCC-CcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEE--Ee
Q 021484 110 LVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR--LM 186 (312)
Q Consensus 110 ~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~ 186 (312)
.|+.|++.. +. + .....+... . ....+++ +++|+++++....+.|.+++.. ++... .+
T Consensus 190 ~I~~~~~~~~g~------~--------~~~~~~~~~-~--~P~gi~v-d~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 190 LLLRIPVDSTDK------P--------GEPEIFVEQ-T--NIDDFAF-DVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp EEEEEEBCTTSC------B--------CCCEEEEES-C--CCSSEEE-BTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred EEEEEEeCCCCC------C--------CccEEEecc-C--CCCCeEE-CCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 999999864 20 0 111222211 1 2567888 8999887777778899999975 65532 23
Q ss_pred ecCccceEEEEEc---CCCCeEEEEeC
Q 021484 187 VGDRHVVNQLEPH---PHIPMFATCGI 210 (312)
Q Consensus 187 ~~~~~~v~~~~~~---p~~~~l~t~~~ 210 (312)
......+++++|. |+++.|..++.
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ccccCCceEEEEecccCCCCEEEEECC
Confidence 3333567899998 88777665553
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.46 E-value=0.021 Score=52.50 Aligned_cols=161 Identities=11% Similarity=-0.015 Sum_probs=91.0
Q ss_pred CccEEEEEEccCCC-eEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCC-CEEE
Q 021484 88 NIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVM 164 (312)
Q Consensus 88 ~~~i~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~-~~l~ 164 (312)
...+..|+|.+... ++.+- ..+.|+.+++..... .......+..... ....|++ ++.+ ++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------------~~~~~~vi~~~l~--~P~GLAv-D~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------------VSSYDTVISRDIQ--APDGLAV-DWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------------CEEEECSSCS--CCCEEEE-ETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------------CcceeEEEecCCC--Ccceeee-eecCCcEEE
Confidence 45678899998655 44453 478899998865200 0011122221222 2678888 6655 5555
Q ss_pred EeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-C-CCcEEEccCCCCCCCCCCC-ChhhhhhhhccC
Q 021484 165 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-I-EKTVKLWAPMPTDFPPLPD-NAEKIMKANKQG 241 (312)
Q Consensus 165 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~-~-d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 241 (312)
+-...+.|.+.++........+.........|+++|.+..|..+. . .+.|...++.+.....+.. .......++ +.
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLa-vD 566 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT-LD 566 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEE-EE
T ss_pred EecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEE-Ee
Confidence 666788999999975544333333445678999999866655444 2 3678888887654322211 111111111 22
Q ss_pred -CCCceeEEecCCceEEEEEeccc
Q 021484 242 -REDHSRITLTPDVIMHVLRLQRR 264 (312)
Q Consensus 242 -~~~~~l~s~~~d~~i~i~~~~~~ 264 (312)
.++.+.++-.....|...++...
T Consensus 567 ~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 567 LLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCeEEEEeCCCCcEEEEecCCC
Confidence 24556666666677777776544
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.39 E-value=0.019 Score=46.98 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=88.6
Q ss_pred CccceEEEEEcCCCCcEEEEEeCCCeEEE-EEc--cCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE
Q 021484 29 NSIRLNAIVIDPRNPNYFAVGGSDEYARV-YDI--RKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 105 (312)
Q Consensus 29 h~~~v~~~~~~p~~~~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 105 (312)
+...+..+++.|++ .+++.+. +|.+.. .|- .+.+ .. .......+..+++.+++.+++.
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG~tW~---------------~~--~~~~~~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 161 AIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQTAWE---------------PH--NRTTSRRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp CCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTCSSCE---------------EE--ECCSSSCEEEEEECTTSCEEEE
T ss_pred CCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCCCcee---------------EC--CCCCCCccceeEECCCCCEEEE
Confidence 45578899999987 6766664 444433 332 1111 00 0223456888999999988887
Q ss_pred ecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc--cCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeE
Q 021484 106 YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 183 (312)
Q Consensus 106 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 183 (312)
+.+|.+++.+...+ +.-..+... .....+..+.+ .+++..++++. +|.| .+..+.++.-
T Consensus 222 ~~~G~~~~s~~D~G----------------~tW~~~~~~~~~~~~~~~~v~~-~~~~~~~~~g~-~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 222 VNGGKIAFSDPDNS----------------ENWGELLSPLRRNSVGFLDLAY-RTPNEVWLAGG-AGAL-LCSQDGGQTW 282 (327)
T ss_dssp ETTTEEEEEETTEE----------------EEECCCBCTTSSCCSCEEEEEE-SSSSCEEEEES-TTCE-EEESSTTSSC
T ss_pred eCCceEEEecCCCC----------------CeeEeccCCcccCCcceEEEEe-cCCCEEEEEeC-CCeE-EEeCCCCccc
Confidence 88888887753222 110001100 01112788888 77777666654 6766 4555556544
Q ss_pred EEeec---CccceEEEEEcCCCCeEEEEeCCCcEEEccC
Q 021484 184 RLMVG---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 219 (312)
Q Consensus 184 ~~~~~---~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~ 219 (312)
..+.. ....++.+.|.+++. +++++.+|.|.-++-
T Consensus 283 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 283 QQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 44432 235678888875544 566677898877664
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.38 E-value=0.0095 Score=52.95 Aligned_cols=55 Identities=13% Similarity=-0.087 Sum_probs=39.3
Q ss_pred CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 169 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 169 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
+|.|..||+.+++.+-+...+. ++..-.....+..++.++.|+.++.||.+++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 6889999999999876665332 222111222466777799999999999998874
No 290
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.32 E-value=0.027 Score=42.78 Aligned_cols=154 Identities=10% Similarity=-0.009 Sum_probs=83.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccC-CCccEEEEEEccCCCeEEEecCCc
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK-NNIHITGLAYSNTSELLISYNDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~d~~ 110 (312)
.+.+++|+|++ .+.++ .+|.++-.+..+.+. ...+.....+.. --..-.++.|.|+|.+.++ .||.
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~---------~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~ 108 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDN---------DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDK 108 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTT---------CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTE
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCc---------ccccccccEecccccccceEEEECCCCCEEEe-CCCE
Confidence 57799999987 66666 678776666544320 000100000000 0011368899999998887 7799
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCe------eEE
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK------LVR 184 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~------~~~ 184 (312)
|+-++..+.... .| .-....-+......+..|.+ .|+|.+.+.. |+.++-....++. ...
T Consensus 109 iyr~~pP~~~~~------~W-----l~~a~~vg~~gw~~~~~lff-~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~ 174 (236)
T 1tl2_A 109 LYKASPPQSDTD------NW-----IARATEVGSGGWSGFKFLFF-HPNGYLYAVH--GQQFYKALPPVSNQDNWLARAT 174 (236)
T ss_dssp EEEESCCCSTTC------CH-----HHHSEEEECSSGGGEEEEEE-CTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCE
T ss_pred EEEeCCCcCCCC------ce-----eccccEeccCCCCceEEEEE-CCCceEEEEe--CCcEEecCCCCCCCcccccccc
Confidence 988875432100 00 00011112222234788887 9999887776 7776544332111 111
Q ss_pred Eee-cCccceEEEEEcCCCCeEEEEeCCCcE
Q 021484 185 LMV-GDRHVVNQLEPHPHIPMFATCGIEKTV 214 (312)
Q Consensus 185 ~~~-~~~~~v~~~~~~p~~~~l~t~~~d~~i 214 (312)
.+- .....-..+.|.|++.+.+.. ++.+
T Consensus 175 ~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 175 KIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred eeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 221 233344557799999887666 6633
No 291
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.31 E-value=0.0075 Score=54.60 Aligned_cols=153 Identities=10% Similarity=0.122 Sum_probs=92.3
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEec------CCcEEEEEcC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN------DELVYLFEKN 117 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~------d~~i~iwd~~ 117 (312)
..++.++.|+.|..+|..+++.+.......+.... .....++ + .++.+++... ++.|+.+|..
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~------~~~~~P~--v---~~~~v~vg~~~~~~~~~g~v~a~D~~ 186 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPY------SITGAPR--V---VKGKVIIGNGGAEYGVRGFVSAYDAD 186 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSC------BCCSCCE--E---ETTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcc------eecCCCE--E---ECCEEEEeCCCCCcCCCCEEEEEECC
Confidence 46778888999999999999865332211000000 0001111 1 1444444432 4789999998
Q ss_pred CCcCCCCCcCCcccccCCCCCceEeccc-----------------------------CCceeeEEEEecCCCCEEEEecc
Q 021484 118 MGLGPSPLSLSPEDLQKREEPQVYSGHR-----------------------------NSQTVKGVNFFGPNDEYVMSGSD 168 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~v~~v~~~s~~~~~l~~~~~ 168 (312)
++ +.+..+.... .......+++ ++....++.++.
T Consensus 187 tG----------------~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~-d~~~~~vy~~~~ 249 (668)
T 1kv9_A 187 TG----------------KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAY-DPELDLLYVGTG 249 (668)
T ss_dssp TC----------------CEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEE-ETTTTEEEEECC
T ss_pred CC----------------cEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEE-cCCCCEEEEeCC
Confidence 87 3333322100 0011234677 788888888887
Q ss_pred Cce-------------------EEEEeccCCeeEEEeec--Cc-------cceEEEEEcCCCC---eEEEEeCCCcEEEc
Q 021484 169 CGH-------------------LFIWKKKGGKLVRLMVG--DR-------HVVNQLEPHPHIP---MFATCGIEKTVKLW 217 (312)
Q Consensus 169 dg~-------------------v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~p~~~---~l~t~~~d~~i~iw 217 (312)
++. |..+|..+|+.+-.++. |. .++....+..+++ .++.++.+|.+.++
T Consensus 250 ~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 250 NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 764 99999999998877764 22 2222222233664 58888899999999
Q ss_pred cCCCCCC
Q 021484 218 APMPTDF 224 (312)
Q Consensus 218 d~~~~~~ 224 (312)
|..++++
T Consensus 330 D~~tG~~ 336 (668)
T 1kv9_A 330 DRTNGKL 336 (668)
T ss_dssp ETTTCCE
T ss_pred ECCCCCE
Confidence 9988774
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.27 E-value=0.0081 Score=53.28 Aligned_cols=56 Identities=7% Similarity=-0.106 Sum_probs=40.0
Q ss_pred cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 168 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 168 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
.+|.|..||+.+++.+-.+.... .+........+..++.++.|+.|+.||.++++.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 35889999999999877765332 222222333456777789999999999998874
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=0.0044 Score=52.89 Aligned_cols=152 Identities=9% Similarity=0.049 Sum_probs=89.0
Q ss_pred cEEEEEEccC--CCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec
Q 021484 90 HITGLAYSNT--SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 167 (312)
Q Consensus 90 ~i~~~~~~~~--~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~ 167 (312)
....++++|+ +.++++-..+.|+.+|+.++ .+..+.... .....++| ++++++|+.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-----------------~v~~~~~~~--~~P~~ia~-d~~G~~lyvad 197 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-----------------YVSTVYSGL--SKVRTICW-THEADSMIITN 197 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-----------------EEEEEECCC--SCEEEEEE-CTTSSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-----------------EEEEEecCC--CCcceEEE-eCCCCEEEEEe
Confidence 4578899973 44444443488999998764 233333222 23789999 89999666554
Q ss_pred c-C----ceEEEEeccCCeeE--EEeecCccceEEEEEcC-CCCeEEEEeCCCcEEEccCCCCCCCCCCC-Chhhhhhhh
Q 021484 168 D-C----GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKAN 238 (312)
Q Consensus 168 ~-d----g~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~ 238 (312)
. . ..+.+++.. +... ..+.. ......++++| ++.++++-..++.|..+++.+.....+.. .......-.
T Consensus 198 ~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 198 DQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp CCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred CCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 3 2 234444433 2211 22322 23456788999 66666666677899999987654311100 000111223
Q ss_pred ccCCCCc-eeEEecCCceEEEEEecc
Q 021484 239 KQGREDH-SRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 239 ~~~~~~~-~l~s~~~d~~i~i~~~~~ 263 (312)
.+.++++ ++++-.....|..++...
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 4566666 667777788888887653
No 294
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.15 E-value=0.058 Score=42.22 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=95.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEE-ecCCc
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s-~~d~~ 110 (312)
..-.+++.+++ .++++.-.++.+.++++.....+.. +..................++|+|.++.|.+ .....
T Consensus 71 D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~~------~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p 143 (255)
T 3qqz_A 71 DLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVKI------LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP 143 (255)
T ss_dssp SEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEEE------EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS
T ss_pred ChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeeee------eeeeccccccccccCCcceEEEeCCCCEEEEEECcCC
Confidence 45678888877 5666655678899998765431000 0000000001223455789999999864444 44333
Q ss_pred EEEEEcCCCcCCCCCcCCcccccCCCCCceEec-----ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEE
Q 021484 111 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-----HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 111 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 185 (312)
..+|.+.... .. ..+..+.. ......+..+++.+..+++++.......|.++|.. ++.+..
T Consensus 144 ~~i~~~~g~~--~~-----------~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~ 209 (255)
T 3qqz_A 144 IEVYKVNGLL--SS-----------NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGE 209 (255)
T ss_dssp EEEEEEESTT--CS-----------SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEE
T ss_pred ceEEEEcccc--cC-----------CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEE
Confidence 3444443110 00 11111110 00111278899955567788888889999999976 666665
Q ss_pred eecCc---------cceEEEEEcCCCCeEEEEeCCCcEEEccC
Q 021484 186 MVGDR---------HVVNQLEPHPHIPMFATCGIEKTVKLWAP 219 (312)
Q Consensus 186 ~~~~~---------~~v~~~~~~p~~~~l~t~~~d~~i~iwd~ 219 (312)
+.... ...-.|+|.|+|++.++ ++-..++.+..
T Consensus 210 ~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 210 MSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 54321 25688999999986555 66666666654
No 295
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.13 E-value=0.041 Score=46.18 Aligned_cols=109 Identities=9% Similarity=0.076 Sum_probs=76.9
Q ss_pred EEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc--CCceeeEEEEecCCCCEEEEeccCceE
Q 021484 95 AYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKGVNFFGPNDEYVMSGSDCGHL 172 (312)
Q Consensus 95 ~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~s~~~~~l~~~~~dg~v 172 (312)
....+|.-++.+.++.||..++... ...+.+.... ....+..+.. +|+|.+|+..+. ..|
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~----------------~~Yk~L~~~~~i~f~~i~qlvl-SpsG~lLAl~g~-~~V 88 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTD----------------SLYHSLNFSRHLVLDDTFHVIS-STSGDLLCLFND-NEI 88 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTC----------------SSCEEEECTTTCCCCTTCEEEE-CTTSSEEEEECS-SEE
T ss_pred EEEcCCCEEEEEECCEEEEEECCCC----------------CcceEEecCcccccCceeEEEE-CCCCCEEEEecC-CeE
Confidence 4456777888888899999998754 3344444331 1123778888 999999998864 577
Q ss_pred EEEeccCCe------------eEEEeec------CccceEEEEEcCCC---CeEEEEeCCCcEEEccCCC
Q 021484 173 FIWKKKGGK------------LVRLMVG------DRHVVNQLEPHPHI---PMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 173 ~iwd~~~~~------------~~~~~~~------~~~~v~~~~~~p~~---~~l~t~~~d~~i~iwd~~~ 221 (312)
.|..+..+. ..+.+.. ...+|..+.|||-+ ..|++-..|++||+||+..
T Consensus 89 ~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 89 FVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred EEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 787765221 1223332 24679999999965 5699999999999999986
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.13 E-value=0.065 Score=47.97 Aligned_cols=156 Identities=10% Similarity=-0.045 Sum_probs=86.7
Q ss_pred CccEEEEEEccCCCeEE-Ee-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCC-ceEecccCCceeeEEEEecCC-CCEE
Q 021484 88 NIHITGLAYSNTSELLI-SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEP-QVYSGHRNSQTVKGVNFFGPN-DEYV 163 (312)
Q Consensus 88 ~~~i~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~v~~~s~~-~~~l 163 (312)
...+..++|++.+..|. +- ..+.|+.+++... ... ..+..... ....+++ ++. +++.
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~----------------~~~~~v~~~~~~--~P~GlAv-D~~~~~ly 99 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT----------------ESVQNVVVSGLL--SPDGLAC-DWLGEKLY 99 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------CEEEECSSCS--CEEEEEE-ETTTTEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC----------------CceEEEEeCCCC--CcCeEEE-EecCCEEE
Confidence 34578999998766444 43 4788998888653 111 22222212 2788998 774 5555
Q ss_pred EEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe--CCCcEEEccCCCCCCCCCCC-Chhhhhhhhcc
Q 021484 164 MSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQ 240 (312)
Q Consensus 164 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~--~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~ 240 (312)
++-...+.|.+.++........+...-.....++++|.+..|..+. ..+.|...++.+.....+.. ........ ..
T Consensus 100 ~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl-al 178 (619)
T 3s94_A 100 WTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL-TL 178 (619)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE-EE
T ss_pred EEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE-EE
Confidence 6666788999999875433323323345567899999866654444 24567777766544322211 11111111 12
Q ss_pred CC-CCceeEEecCCceEEEEEecc
Q 021484 241 GR-EDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 241 ~~-~~~~l~s~~~d~~i~i~~~~~ 263 (312)
.+ ++.+.++-...+.|...++..
T Consensus 179 d~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 179 DYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp ETTTTEEEEEETTTCCEEEESSSC
T ss_pred EccCCEEEEEeCCCCeEEEecCCC
Confidence 22 345556666666666666543
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.089 Score=45.44 Aligned_cols=123 Identities=10% Similarity=0.074 Sum_probs=65.4
Q ss_pred EEEEEEccCC-CeEEEe-cCCcEEEEEcC-------CCcCCCCCcCCcccccCCCCCce-EecccCCceeeEEEEecCCC
Q 021484 91 ITGLAYSNTS-ELLISY-NDELVYLFEKN-------MGLGPSPLSLSPEDLQKREEPQV-YSGHRNSQTVKGVNFFGPND 160 (312)
Q Consensus 91 i~~~~~~~~~-~~l~s~-~d~~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~s~~~ 160 (312)
...++.+|++ .++++. .++.|+.+|+. ++....+.. .+. . ..... +... .......++| +|++
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~--~~~--~-g~~~~l~~~~-~~~~p~~ia~-~p~G 321 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV--KNN--P-NTFKQLFTIA-DPSWEFQIFI-HPTG 321 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG--GGC--T-TTEEEEEECS-SSSCCEEEEE-CTTS
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc--ccc--c-cccceeEecC-CCCCceEEEE-cCCC
Confidence 4577889955 555554 58889999987 441000000 000 0 00111 2111 1122578999 9999
Q ss_pred CEE-EEeccCceEEEEecc--CCee--EEEeecC---c------------cceE-EEEEc-------CCCCeEEEEeCCC
Q 021484 161 EYV-MSGSDCGHLFIWKKK--GGKL--VRLMVGD---R------------HVVN-QLEPH-------PHIPMFATCGIEK 212 (312)
Q Consensus 161 ~~l-~~~~~dg~v~iwd~~--~~~~--~~~~~~~---~------------~~v~-~~~~~-------p~~~~l~t~~~d~ 212 (312)
++| ++-+..+.|+.++.. ++.. ...+-+. . .... .+... +++.++++-....
T Consensus 322 ~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~ 401 (496)
T 3kya_A 322 KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNF 401 (496)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGT
T ss_pred CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCC
Confidence 954 455667889986654 3322 1222221 0 1234 44444 4566666666778
Q ss_pred cEEEccCC
Q 021484 213 TVKLWAPM 220 (312)
Q Consensus 213 ~i~iwd~~ 220 (312)
.|+.++..
T Consensus 402 rIr~i~~~ 409 (496)
T 3kya_A 402 CVRKVTPE 409 (496)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 99999854
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.08 E-value=0.022 Score=50.76 Aligned_cols=56 Identities=9% Similarity=-0.028 Sum_probs=38.7
Q ss_pred cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 168 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 168 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
..|.|..||+.+++.+-..+.. .++..-.....+..++.++.|+.|+.||.++++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 3588999999999887666422 1111111222566777789999999999999873
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.04 E-value=0.09 Score=43.04 Aligned_cols=119 Identities=5% Similarity=0.077 Sum_probs=75.0
Q ss_pred ccEEEEEE--ccC-CC-eEEE-ecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEE
Q 021484 89 IHITGLAY--SNT-SE-LLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV 163 (312)
Q Consensus 89 ~~i~~~~~--~~~-~~-~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l 163 (312)
..+..+++ +|. ++ +++. ..+|.+..|++.... ....+.+.++.|.... .+..+.. ++....|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~---------~g~~~~~lVR~f~lgs---q~Egcvv-Dd~~g~L 194 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADK---------NGYISGKKVRAFKMNS---QTEGMAA-DDEYGRL 194 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECT---------TSCEEEEEEEEEECSS---CEEEEEE-ETTTTEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCC---------CCcccceEEEEecCCC---CcceEEE-cCCCCeE
Confidence 44556777 664 44 3444 458999999884310 0001114556665433 2677777 7888899
Q ss_pred EEeccCceEEEEecc-----CCeeEEEee-cC-ccceEEEEE--cCCCC-eEEEEe-CCCcEEEccCC
Q 021484 164 MSGSDCGHLFIWKKK-----GGKLVRLMV-GD-RHVVNQLEP--HPHIP-MFATCG-IEKTVKLWAPM 220 (312)
Q Consensus 164 ~~~~~dg~v~iwd~~-----~~~~~~~~~-~~-~~~v~~~~~--~p~~~-~l~t~~-~d~~i~iwd~~ 220 (312)
+.+-++..|..++.. +++.+..+. ++ ...+..|++ .++++ +|++++ .+.+..+||.+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998888888855 345555543 22 236777877 45556 655555 67899999986
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.00 E-value=0.04 Score=44.19 Aligned_cols=64 Identities=8% Similarity=0.092 Sum_probs=38.4
Q ss_pred CCCEEEEeccC-----ceEEEEeccCCeeEEEe--ecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCC
Q 021484 159 NDEYVMSGSDC-----GHLFIWKKKGGKLVRLM--VGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDF 224 (312)
Q Consensus 159 ~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~ 224 (312)
++++++.|+.+ ..+.+||+.+.+....- .........+.+ ++++++.|+.+ ..+.+||+.+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 57777777654 45889998877654321 111111122222 56677777754 4688999987754
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.95 E-value=0.11 Score=41.99 Aligned_cols=150 Identities=9% Similarity=0.159 Sum_probs=95.8
Q ss_pred EEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceE
Q 021484 93 GLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 172 (312)
Q Consensus 93 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v 172 (312)
+.-.+|..+++|--....+.+||+++. ..++.+.- ...|.--.|.+ .+.|+..+ +..|
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK----------------~klks~~~---~e~VvfWkWis--~~~L~lVT-~taV 128 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMK----------------SKMKAHTM---TDDVTFWKWIS--LNTVALVT-DNAV 128 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTT----------------EEEEEEEC---SSCEEEEEECS--SSEEEEEE-SSEE
T ss_pred eeeeCCCccEEEEecCCeEEEechHHh----------------hhhcceec---CCccEEEEecC--CCeEEEEc-CCcE
Confidence 445688888888766889999999876 44444432 23477788843 34444433 4679
Q ss_pred EEEeccC-CeeEEEeecCc----cceEEEEEcCCCCeEEEEe-------CCCcEEEccCCCCCCCCCCCChhhhhhhhcc
Q 021484 173 FIWKKKG-GKLVRLMVGDR----HVVNQLEPHPHIPMFATCG-------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 240 (312)
Q Consensus 173 ~iwd~~~-~~~~~~~~~~~----~~v~~~~~~p~~~~l~t~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 240 (312)
+-|++.. ..+.+.+..|. ..|..-..+++.++++..+ ..|.+.+|..+.+....+.+|...-.....-
T Consensus 129 yHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~ 208 (365)
T 2xzh_A 129 YHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKME 208 (365)
T ss_dssp EEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCT
T ss_pred EEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecC
Confidence 9999863 56777777664 3567777889999865544 2378899998887766677776554221111
Q ss_pred -CCCCceeEEecC----CceEEEEEeccc
Q 021484 241 -GREDHSRITLTP----DVIMHVLRLQRR 264 (312)
Q Consensus 241 -~~~~~~l~s~~~----d~~i~i~~~~~~ 264 (312)
.+....++++.. .+.+++.++...
T Consensus 209 g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 209 GNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp TCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred CCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 112233444332 368999988543
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.93 E-value=0.11 Score=42.87 Aligned_cols=164 Identities=9% Similarity=0.069 Sum_probs=91.2
Q ss_pred ceEEEEEcCCCCcEEEEE------------eCCCeEEEEEccCCeecCCCCCCCCccccccccc-ccCCCccEEEEEEcc
Q 021484 32 RLNAIVIDPRNPNYFAVG------------GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN 98 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 98 (312)
..-+++..|+| ..++++ ..+|.|.++|..+... ....+..... +....-....+.+.+
T Consensus 51 G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~--------~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 51 GSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP--------AVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp CCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSC--------CEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred CcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCC--------ceEEEEccCCCCCcCceeeeeeEEEE
Confidence 34567788877 444443 1689999999874320 0111111100 011233566777765
Q ss_pred --CCC--eEEEe-c--CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec----
Q 021484 99 --TSE--LLISY-N--DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---- 167 (312)
Q Consensus 99 --~~~--~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~---- 167 (312)
++. ++++. . +..+.+|++..... ....+..+.+.. ......+.+ .++|.+.++..
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~------------~~~~~~~~~g~~-~~~pND~~v-~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEK------------SLLHLKTIRHKL-LPSVNDIVA-VGPEHFYATNDHYFI 187 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTT------------EEEEEEEECCTT-CSSEEEEEE-EETTEEEEEESCSCS
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCC------------EEEEEeccccCC-CCCCceEEE-eCCCCEEecCCcEeC
Confidence 454 44442 2 56788887754310 001223333322 133788888 78898777654
Q ss_pred -------------cCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe-CCCcEEEccCCC
Q 021484 168 -------------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMP 221 (312)
Q Consensus 168 -------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~ 221 (312)
..|.|+-+|. ++. ..+...-...+.++|+|+++.|..+. ..+.|..|++..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1355666665 332 22322234568999999998866554 678999999863
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.77 E-value=0.098 Score=42.02 Aligned_cols=185 Identities=11% Similarity=0.098 Sum_probs=89.5
Q ss_pred cEEEEEeCC----CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC------CcEE
Q 021484 44 NYFAVGGSD----EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND------ELVY 112 (312)
Q Consensus 44 ~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d------~~i~ 112 (312)
.+++.|+.+ ..+.+||+.+.++..... ....... ...+.+ ++++++.+ .+ ..+.
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~------------~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 121 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLG------------PPTPRDS-LAACAA--EGKIYTSGGSEVGNSALYLFE 121 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEEC------------CSSCCBS-CEEEEE--TTEEEEECCBBTTBSCCCCEE
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCC------------CCccccc-eeEEEE--CCEEEEECCCCCCCcEeeeEE
Confidence 688888755 678899998876532211 0011111 112222 55655554 33 3588
Q ss_pred EEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc---------CceEEEEeccCCeeE
Q 021484 113 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---------CGHLFIWKKKGGKLV 183 (312)
Q Consensus 113 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~---------dg~v~iwd~~~~~~~ 183 (312)
+||..+.. | ..+........-.+++. .++++++.|+. -..+.+||+.+.+..
T Consensus 122 ~~d~~~~~---------W--------~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 122 CYDTRTES---------W--------HTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EEETTTTE---------E--------EEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred EEeCCCCc---------e--------EeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 88987641 1 11111111111122222 25667777764 345889998877543
Q ss_pred EEee--cCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCCCCCCCChhhhhhhhccCCCCceeEEecCC---
Q 021484 184 RLMV--GDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD--- 253 (312)
Q Consensus 184 ~~~~--~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--- 253 (312)
..-. .....-..+.+ ++++++.|+.+ ..+.+||+.+.+...+...............++.+++.++.+
T Consensus 183 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 183 ELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred ECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCe
Confidence 3211 11111122222 56677777643 468889988875433321111111111111245666666643
Q ss_pred --ceEEEEEeccc
Q 021484 254 --VIMHVLRLQRR 264 (312)
Q Consensus 254 --~~i~i~~~~~~ 264 (312)
..+.++|+.+.
T Consensus 261 ~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 RLGHILEYNTETD 273 (306)
T ss_dssp BCCEEEEEETTTT
T ss_pred eeeeEEEEcCCCC
Confidence 45666665443
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.63 E-value=0.055 Score=43.90 Aligned_cols=156 Identities=8% Similarity=0.043 Sum_probs=96.2
Q ss_pred EEEEEccCC-CeEEEe-cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCc-eEec----ccCCceeeEEEEe--cCCCCE
Q 021484 92 TGLAYSNTS-ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ-VYSG----HRNSQTVKGVNFF--GPNDEY 162 (312)
Q Consensus 92 ~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~v~~v~~~--s~~~~~ 162 (312)
.+++|++.. .++++. ..+.|..|+...+ .... .+.+ ......+..+.|. .+++++
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~----------------~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL 79 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ----------------SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRL 79 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTC----------------CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEE
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCC----------------eEEEEecCCccccCCCcceeeEEEEeccCCCCcE
Confidence 367898754 466665 4999999998644 1111 1111 0111125788873 477777
Q ss_pred EEEec-------------cCceEEEEecc---CCeeEEEeec--C-----------ccceEEEEEcCCCCeEEEEeCC-C
Q 021484 163 VMSGS-------------DCGHLFIWKKK---GGKLVRLMVG--D-----------RHVVNQLEPHPHIPMFATCGIE-K 212 (312)
Q Consensus 163 l~~~~-------------~dg~v~iwd~~---~~~~~~~~~~--~-----------~~~v~~~~~~p~~~~l~t~~~d-~ 212 (312)
+++.. .+..|..+|+. +++.+..... . .....+++..++|+..++++.- +
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~ 159 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP 159 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC
Confidence 76543 26789999999 7877654431 1 1247899999999999988877 7
Q ss_pred cEEEccCCCCCCCCC----C-CChhhhhhhhccCCCCceeEEecCCceEEEEEecc
Q 021484 213 TVKLWAPMPTDFPPL----P-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 263 (312)
Q Consensus 213 ~i~iwd~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~~~~~ 263 (312)
.|...+........+ + .....-+.-....+++..|+.....+.+..+|+..
T Consensus 160 ~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 160 AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 777777765532211 0 01110011223556676666665599999999774
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.60 E-value=0.078 Score=42.47 Aligned_cols=104 Identities=14% Similarity=0.105 Sum_probs=53.6
Q ss_pred CCCEEEEeccC-----ceEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCCCC
Q 021484 159 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 226 (312)
Q Consensus 159 ~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~ 226 (312)
++++++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777653 3688999887654332 2211111122222 66777777654 458889988775432
Q ss_pred CCCChhhhhhhhccCCCCceeEEecCC-----ceEEEEEeccc
Q 021484 227 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 264 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~i~~~~~~ 264 (312)
+...............++.+++.++.+ ..+.++|+.+.
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 211111111111111245566666554 45677776543
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.57 E-value=0.12 Score=41.71 Aligned_cols=64 Identities=13% Similarity=0.055 Sum_probs=38.2
Q ss_pred CCCEEEEeccC-----ceEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCC
Q 021484 159 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDF 224 (312)
Q Consensus 159 ~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~ 224 (312)
++++++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56777777654 4588999887654322 1111111222333 66677777754 4688999888764
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.56 E-value=0.13 Score=41.24 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=37.6
Q ss_pred CCCEEEEeccC-------ceEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCC
Q 021484 159 NDEYVMSGSDC-------GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDF 224 (312)
Q Consensus 159 ~~~~l~~~~~d-------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~ 224 (312)
++++++.|+.+ ..+.+||+.+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 56677777643 3588999887754432 1111111122222 56777777754 3688999887754
No 308
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.53 E-value=0.077 Score=40.30 Aligned_cols=111 Identities=14% Similarity=-0.008 Sum_probs=65.7
Q ss_pred ccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc
Q 021484 89 IHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD 168 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~ 168 (312)
..+..++|+|+|.+.+. .+|.++-.+..+... ..|. -..+.-+......-..+.| .++|.+.++ .
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~------~~W~-----~s~t~IG~~Gw~~F~a~~f-D~~G~LYav--~ 105 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDN------DNWM-----GRAKKIGNGGWNQFQFLFF-DPNGYLYAV--S 105 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTT------CCHH-----HHCEEEECSCGGGCSEEEE-CTTSCEEEE--E
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCc------cccc-----ccccEecccccccceEEEE-CCCCCEEEe--C
Confidence 36779999999997777 888877766544200 0000 0011111111111367777 899988777 5
Q ss_pred CceEEEEeccCCeeE------EEe-ecCccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021484 169 CGHLFIWKKKGGKLV------RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKL 216 (312)
Q Consensus 169 dg~v~iwd~~~~~~~------~~~-~~~~~~v~~~~~~p~~~~l~t~~~d~~i~i 216 (312)
||.|+-++..+...- ..+ ...-..+..|.+.|+|.+.+.. |+.++-
T Consensus 106 dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 106 KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 699988875332110 111 1122567899999999988777 777543
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.50 E-value=0.15 Score=49.17 Aligned_cols=153 Identities=12% Similarity=0.132 Sum_probs=90.3
Q ss_pred ceEEEE---EcCCCCcEEEEEe----------CCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc
Q 021484 32 RLNAIV---IDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN 98 (312)
Q Consensus 32 ~v~~~~---~~p~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 98 (312)
.+.+++ |..+...+|++|+ ..|.|++|++..+++. .... ....+++++++--
T Consensus 830 ~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~----------lv~~----~~v~g~v~al~~~- 894 (1158)
T 3ei3_A 830 YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQ----------TVAE----KEVKGAVYSMVEF- 894 (1158)
T ss_dssp EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEE----------EEEE----EEESSCEEEEEEE-
T ss_pred ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEE----------EEEE----EEcCCcCEEEeee-
Confidence 345544 4333336888876 3588999998744421 1111 2235678887643
Q ss_pred CCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec-ccCCceeeEEEEecCCCCEEEEeccCceEEEEec
Q 021484 99 TSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK 177 (312)
Q Consensus 99 ~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~ 177 (312)
+| +|+++...+|++|++... +.++ ... +-.. +..+.. ...+++++.|..-..|.++..
T Consensus 895 ~g-~Lla~ig~~l~vy~l~~~----------------~~L~-~~~~~~~~--i~~~~l-~~~~~~I~vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 895 NG-KLLASINSTVRLYEWTTE----------------KELR-TECNHYNN--IMALYL-KTKGDFILVGDLMRSVLLLAY 953 (1158)
T ss_dssp TT-EEEEEETTEEEEEEECTT----------------SCEE-EEEEECCC--SCEEEE-EEETTEEEEEESSBCEEEEEE
T ss_pred CC-EEEEEcCCEEEEEECCCC----------------ceEE-EEeecccc--EEEEEE-eccCCEEEEEEhhheEEEEEE
Confidence 34 666677789999999764 3322 111 1111 222222 234788999988777777554
Q ss_pred --cCCeeEEEee-cCccceEEEEEcCCCCeEEEEeCCCcEEEccCCC
Q 021484 178 --KGGKLVRLMV-GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 178 --~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 221 (312)
..++....-+ .+...++++.+-.+ ..++.+..+|.|.+.....
T Consensus 954 ~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 954 KPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 3444332222 23456788887654 4677888999999987654
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.49 E-value=0.15 Score=42.81 Aligned_cols=134 Identities=10% Similarity=0.115 Sum_probs=76.9
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCC-C--CCCCcccccccccccCCCccEEEEEEccCCC---eEEE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPI-S--SDTPVDTFCPRHLIGKNNIHITGLAYSNTSE---LLIS 105 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~s 105 (312)
.|..+..+|+| .+||..+ +..|.|-.+..+...... . ..-....+...........+|..+.|+|-+. .|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 57789999999 7888775 468999998843211110 0 0001112222222112357899999999763 5555
Q ss_pred -ecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEE--eccCceEEEEe
Q 021484 106 -YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS--GSDCGHLFIWK 176 (312)
Q Consensus 106 -~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~--~~~dg~v~iwd 176 (312)
.+|+.|++||+.... ..+. .+.+ ....|........|.+++| ..++=.|.. .+..|.|+-.-
T Consensus 145 LtsD~~Ir~yDl~~s~-~~P~-----~L~k--~~~~fg~d~~~~ev~S~~F-g~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQ-EKPI-----VLNK--PNNSFGLDARVNDITDLEF-SKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EETTSCEEEEETTCTT-SCCE-----EESC--CCSEEESCSSCCCEEEEEE-CTTSSCEEEEECTTSCEEEEES
T ss_pred EecCCEEEEEEcccCC-CCCc-----chhc--cccccCCCcccceEEEEEE-cCCCcEEEEEecCCCCCEEEEC
Confidence 689999999998631 0000 1111 1112221111133889999 777666666 55888887654
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.42 E-value=0.1 Score=42.09 Aligned_cols=104 Identities=9% Similarity=0.039 Sum_probs=52.9
Q ss_pred CCCEEEEeccC-----ceEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCCCC
Q 021484 159 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 226 (312)
Q Consensus 159 ~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~ 226 (312)
++++++.|+.+ ..+.+||+.+.+.... +.........+.+ ++.+++.|+.+ ..+.+||+.+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56777777643 3588899887654322 1111111122223 56677777654 458889988775332
Q ss_pred CCCChhhhhhhhccCCCCceeEEecCC-----ceEEEEEeccc
Q 021484 227 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 264 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~i~~~~~~ 264 (312)
+...............++.+++.++.+ ..+.++|+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 221111110111111245566666554 45677776543
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.34 E-value=0.33 Score=39.51 Aligned_cols=154 Identities=8% Similarity=-0.047 Sum_probs=84.0
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
+..+..+.+.+++ .+++.+ .++.|.. ....++ .-..........+..+++.+++.+++.+..+
T Consensus 121 ~~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~--------------tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 183 (327)
T 2xbg_A 121 PGSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGK--------------NWQALVQEAIGVMRNLNRSPSGEYVAVSSRG 183 (327)
T ss_dssp SSCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTS--------------SEEEEECSCCCCEEEEEECTTSCEEEEETTS
T ss_pred CCCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCC--------------CCEEeecCCCcceEEEEEcCCCcEEEEECCC
Confidence 4457788877666 566555 4554422 122222 0000112234568899999999888888766
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 188 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 188 (312)
.++.-+-..+ ..-..+. ... ..+..+.+ .+++..++. +.+|.+++.+...++.-..+..
T Consensus 184 ~~~~S~d~gG----------------~tW~~~~~~~~--~~~~~~~~-~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 184 SFYSTWEPGQ----------------TAWEPHNRTTS--RRLHNMGF-TPDGRLWMI-VNGGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp SEEEEECTTC----------------SSCEEEECCSS--SCEEEEEE-CTTSCEEEE-ETTTEEEEEETTEEEEECCCBC
T ss_pred cEEEEeCCCC----------------CceeECCCCCC--CccceeEE-CCCCCEEEE-eCCceEEEecCCCCCeeEeccC
Confidence 6655432111 1111121 122 23788888 788876554 4578877764332443322221
Q ss_pred ----CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCC
Q 021484 189 ----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 189 ----~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
+...+..+.+.|++..++.+. ++.|. +....+
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG 279 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGG 279 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTT
T ss_pred CcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCC
Confidence 123578899998877666654 67663 333433
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.21 E-value=0.12 Score=41.53 Aligned_cols=145 Identities=9% Similarity=0.040 Sum_probs=73.9
Q ss_pred cEEEEEeC--CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cC----CcEEEEEc
Q 021484 44 NYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND----ELVYLFEK 116 (312)
Q Consensus 44 ~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d----~~i~iwd~ 116 (312)
.+++.|+. ...+.+||..+.++......+ ..... ...+. .++++++.+ .+ ..+.+||.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p------------~~r~~-~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~ 77 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPF------------EKRRD-AACVF--WDNVVYILGGSQLFPIKRMDCYNV 77 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCS------------CCCBS-CEEEE--ETTEEEEECCBSSSBCCEEEEEET
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCC------------cccce-eEEEE--ECCEEEEEeCCCCCCcceEEEEeC
Confidence 56777764 367889999988764321110 11111 11222 255555554 33 56888888
Q ss_pred CCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccC------ceEEEEeccCCeeEEEeec--
Q 021484 117 NMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC------GHLFIWKKKGGKLVRLMVG-- 188 (312)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~-- 188 (312)
.+. .-..+........-.+++. .++++++.|+.+ ..+.+||..+.+....-..
T Consensus 78 ~~~-----------------~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 78 VKD-----------------SWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp TTT-----------------EEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred CCC-----------------eEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 764 1111111111111122222 256777777765 4688999887764332111
Q ss_pred CccceEEEEEcCCCCeEEEEeC---------CCcEEEccCCCCCC
Q 021484 189 DRHVVNQLEPHPHIPMFATCGI---------EKTVKLWAPMPTDF 224 (312)
Q Consensus 189 ~~~~v~~~~~~p~~~~l~t~~~---------d~~i~iwd~~~~~~ 224 (312)
.......+.+ ++++++.|+. -..+.+||+.+...
T Consensus 139 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 139 QRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred CcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 1111122222 5666666653 34588899887753
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.14 E-value=0.16 Score=40.93 Aligned_cols=64 Identities=8% Similarity=0.030 Sum_probs=36.7
Q ss_pred CCCEEEEeccC--------ceEEEEeccCCeeEEE--eecCccceEEEEEcCCCCeEEEEeC-C-----CcEEEccCCCC
Q 021484 159 NDEYVMSGSDC--------GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGI-E-----KTVKLWAPMPT 222 (312)
Q Consensus 159 ~~~~l~~~~~d--------g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~t~~~-d-----~~i~iwd~~~~ 222 (312)
++..++.|+.+ ..+.+||..+.+-... +.........+. -++++++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56677777742 4588999887754321 111111111222 35667777775 2 46888998877
Q ss_pred CC
Q 021484 223 DF 224 (312)
Q Consensus 223 ~~ 224 (312)
+.
T Consensus 176 ~W 177 (315)
T 4asc_A 176 EW 177 (315)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.07 E-value=0.3 Score=39.05 Aligned_cols=103 Identities=13% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCCEEEEeccCc-----eEEEEeccCCeeEEEe--ecCccceEEEEEcCCCCeEEEEeCC-------CcEEEccCCCCCC
Q 021484 159 NDEYVMSGSDCG-----HLFIWKKKGGKLVRLM--VGDRHVVNQLEPHPHIPMFATCGIE-------KTVKLWAPMPTDF 224 (312)
Q Consensus 159 ~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~t~~~d-------~~i~iwd~~~~~~ 224 (312)
++++++.|+.++ .+.+||+.+.+....- .........+.+ ++++++.|+.+ ..+.+||+.+...
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 567777776543 5788898877643321 111111122222 56666666542 3588899887653
Q ss_pred CCCCCChhhhhhhhccCCCCceeEEecCC-----ceEEEEEecc
Q 021484 225 PPLPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQR 263 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~i~~~~~ 263 (312)
..+...............++.+++.++.+ ..+.++|+.+
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCC
Confidence 22211111110111111245566666554 3566777544
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.98 E-value=0.52 Score=38.71 Aligned_cols=157 Identities=12% Similarity=0.085 Sum_probs=83.1
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC----CCeEEE-e
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLIS-Y 106 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s-~ 106 (312)
....|+|.|++ .++++--..|.|++++...++.. .+.. ...+..........|+++|+ +.+.++ +
T Consensus 33 ~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~-------~v~~--~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 33 SPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKT-------ELGE--VPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-------EEEE--CTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEe-------eecc--cCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 46799999998 67766655899999886554321 0100 11111233566889999995 444444 2
Q ss_pred --cCCcEEEEEcCCCcCCCCCcCCcccccCCCC-CceEe-cccCCceeeEEEEecCCCCEEEEecc-------------C
Q 021484 107 --NDELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSD-------------C 169 (312)
Q Consensus 107 --~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~v~~v~~~s~~~~~l~~~~~-------------d 169 (312)
.++.|.-|.+...... ... +...+. +..+. ...+. ...+.| .|+|.+.++.+. .
T Consensus 103 ~~~~~~v~R~~~~~~~~~-~~~-----~~~~~~i~~~~p~~~~H~--g~~l~f-gpDG~Lyvt~Gd~~~~~~~qd~~~~~ 173 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPS-GEQ-----LGAPDTVFRGIPKGVIHN--GGRIAF-GPDKMLYAGTGESGDTGLSQDRKSLG 173 (347)
T ss_dssp CSSSEEEEEEEBCTTSCT-TCC-----BCCCEEEEEEECCCSSCC--CCCEEE-CTTSCEEEECBCTTCGGGTTCTTCST
T ss_pred cCCCCEEEEEEeCCCCcc-ccc-----CCCcEEEEEcCCCCCCcc--CccccC-CCCCCEEEEECCCCCCccccCCCCCC
Confidence 3556666666542100 000 000011 11111 11111 567898 899987776542 3
Q ss_pred ceEEEEeccCCe-------eEEEe-ecCccceEEEEEcCCCCeEEEE
Q 021484 170 GHLFIWKKKGGK-------LVRLM-VGDRHVVNQLEPHPHIPMFATC 208 (312)
Q Consensus 170 g~v~iwd~~~~~-------~~~~~-~~~~~~v~~~~~~p~~~~l~t~ 208 (312)
|.|.-.+....- ....+ .+|. ....++|+|++.++++-
T Consensus 174 G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 174 GKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred CEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEe
Confidence 555555554210 01122 2454 34689999988776554
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.88 E-value=0.58 Score=40.09 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=36.8
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccccccccc--CCCccEEEEEEccC----CCeEEE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG--KNNIHITGLAYSNT----SELLIS 105 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~----~~~l~s 105 (312)
....|+|.|++ +++++-...+.|++++..+++.. .+..+ ..... ........|+|+|+ +.+.++
T Consensus 28 ~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~-------~~~~~--~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDN-QIWLTERATGKILRVNPESGSVK-------TVFQV--PEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-------EEEEC--TTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEe-------EEecC--CccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 45799999998 66666544457888876544321 01111 11101 12466889999994 444444
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.77 E-value=0.35 Score=38.92 Aligned_cols=64 Identities=9% Similarity=0.171 Sum_probs=37.6
Q ss_pred CCCEEEEecc------CceEEEEeccCCeeEEEe--ecCccceEEEEEcCCCCeEEEEeCCC-----cEEEccCCCCCC
Q 021484 159 NDEYVMSGSD------CGHLFIWKKKGGKLVRLM--VGDRHVVNQLEPHPHIPMFATCGIEK-----TVKLWAPMPTDF 224 (312)
Q Consensus 159 ~~~~l~~~~~------dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~t~~~d~-----~i~iwd~~~~~~ 224 (312)
++++++.|+. -..+.+||+.+.+-...- .........+.+ ++++++.|+.++ .+.+||+.+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 5667777775 246889998876543221 111111122222 667777777554 588899888754
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.72 E-value=0.7 Score=38.03 Aligned_cols=151 Identities=12% Similarity=0.122 Sum_probs=79.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC----CCeEEEec
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISYN 107 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~~ 107 (312)
....++|.|++ +++++ ..+|.|++++ .++.. .+.... ...........|+++|+ +.++++..
T Consensus 32 ~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~-------~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLS-------TYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEE-------EEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCcc-------Eeecce---EeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 45789999998 55544 5669999998 34311 011100 11222456789999998 44444433
Q ss_pred -C-----CcEEEEEcCCCcCCCCCcCCcccccCCC-CCceEec-ccCCceeeEEEEecCCCCEEEEecc-----------
Q 021484 108 -D-----ELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSD----------- 168 (312)
Q Consensus 108 -d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~v~~v~~~s~~~~~l~~~~~----------- 168 (312)
. +.|..|+..... +...+ ....+.. .........++| .|+|.+.++.+.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~-----------~~~~~~l~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~G~~~~~~~~~d~~ 165 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGER-----------GVLDRVVLDGIPARPHGLHSGGRIAF-GPDGMLYVTTGEVYERELAQDLA 165 (352)
T ss_dssp ECTTSSEEEEEEEEECSSC-----------EEEEEEEEEEECCCTTCCCCCCCEEE-CTTSCEEEECCCTTCGGGGGCTT
T ss_pred cCCCCCccEEEEEEeCCCC-----------cCceEEEEEeCCCCCCCCcCCceEEE-CCCCCEEEEECCCCCCccccCCC
Confidence 3 678888775320 00001 1111220 000011467898 899976666432
Q ss_pred --CceEEEEeccCC------------eeEEEe-ecCccceEEEEEcC-CCCeEEEEe
Q 021484 169 --CGHLFIWKKKGG------------KLVRLM-VGDRHVVNQLEPHP-HIPMFATCG 209 (312)
Q Consensus 169 --dg~v~iwd~~~~------------~~~~~~-~~~~~~v~~~~~~p-~~~~l~t~~ 209 (312)
.|.|.-++.... .....+ .++. ....++|+| ++.++++-.
T Consensus 166 ~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 166 SLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEE
T ss_pred CCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEc
Confidence 256666665420 011111 2333 356799999 666655544
No 320
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.68 E-value=0.28 Score=39.57 Aligned_cols=64 Identities=11% Similarity=0.136 Sum_probs=36.2
Q ss_pred CCCEEEEeccC-------ceEEEEeccCCeeEEEe--ecCccceEEEEEcCCCCeEEEEeC------CCcEEEccCCCCC
Q 021484 159 NDEYVMSGSDC-------GHLFIWKKKGGKLVRLM--VGDRHVVNQLEPHPHIPMFATCGI------EKTVKLWAPMPTD 223 (312)
Q Consensus 159 ~~~~l~~~~~d-------g~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~t~~~------d~~i~iwd~~~~~ 223 (312)
+++.++.|+.+ ..+.+||..+.+....- ......-..+. .++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777654 35888898876644321 11111111222 36667677663 2358899988775
Q ss_pred C
Q 021484 224 F 224 (312)
Q Consensus 224 ~ 224 (312)
.
T Consensus 187 W 187 (318)
T 2woz_A 187 W 187 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 321
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.67 E-value=0.37 Score=39.70 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=61.4
Q ss_pred ccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEe-cccCCceeeEEEEecCC---CCEEE
Q 021484 89 IHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPN---DEYVM 164 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~s~~---~~~l~ 164 (312)
.....++|.|+|+++++-..+.|++++ .+.. ..+..+. ..........+++ +|+ +..|+
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~--------------~~~~~~~v~~~g~~~p~gia~-~pdf~~~g~lY 93 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRL--------------STYAELSVYHRGESGLLGLAL-HPRFPQEPYVY 93 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEE--------------EEEEECCCCCSTTCSEEEEEE-CTTTTTSCEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCc--------------cEeecceEeecCCCCceeEEE-CCCCCCCCEEE
Confidence 346799999999988887679999998 3200 1111111 0011122789999 887 55555
Q ss_pred Eecc-C-----ceEEEEeccCCe-----eE-EEee---cCccceEEEEEcCCCCeEEEEe
Q 021484 165 SGSD-C-----GHLFIWKKKGGK-----LV-RLMV---GDRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 165 ~~~~-d-----g~v~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~p~~~~l~t~~ 209 (312)
.+.. . +.|..++...++ .+ ..+. ........++|.|+|.+.++.+
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 4443 2 678888876431 11 2233 1112346899999998766643
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.64 E-value=0.7 Score=37.48 Aligned_cols=195 Identities=10% Similarity=0.153 Sum_probs=114.9
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEE
Q 021484 35 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLF 114 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iw 114 (312)
+.-.+|.. ..+|.-. ..++.++|+++++. .+.. ...+.|.--.|-.+ +.|+--.+..|+-|
T Consensus 71 sAIMnP~~-~ViALra-g~~LQiFnletK~k--------------lks~--~~~e~VvfWkWis~-~~L~lVT~taVyHW 131 (365)
T 2xzh_A 71 SAIMNPAS-KVIALKA-GKTLQIFNIEMKSK--------------MKAH--TMTDDVTFWKWISL-NTVALVTDNAVYHW 131 (365)
T ss_dssp EEEECSSS-SEEEEEE-TTEEEEEETTTTEE--------------EEEE--ECSSCEEEEEECSS-SEEEEEESSEEEEE
T ss_pred eeeeCCCc-cEEEEec-CCeEEEechHHhhh--------------hcce--ecCCccEEEEecCC-CeEEEEcCCcEEEE
Confidence 45568877 6777665 68999999998872 2111 11356777778644 45555567899999
Q ss_pred EcCCCcCCCCCcCCcccccCCCCCceEecccC--CceeeEEEEecCCCCEEEEecc-------CceEEEEeccCCeeEEE
Q 021484 115 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGPNDEYVMSGSD-------CGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 115 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~~s~~~~~l~~~~~-------dg~v~iwd~~~~~~~~~ 185 (312)
++.... .+.+.|.-|.. ...|..-.. +++.++++..+- .|.+.+|+.+. +.-+.
T Consensus 132 s~~~~s---------------~P~kvFdR~~~L~~~QIInY~~-d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ 194 (365)
T 2xzh_A 132 SMEGES---------------QPVKMFDRHSSLAGCQIINYRT-DAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQP 194 (365)
T ss_dssp ESSTTC---------------CCEEEEECCGGGTTCEEEEEEE-CTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEE
T ss_pred cccCCC---------------CCceeeecchhcccceEEEEEE-CCCCCEEEEEeEeccCCccceeEEEEeecc-cccce
Confidence 997642 45566655432 122555555 888888765442 47788998874 44567
Q ss_pred eecCccceEEEEEcCC--C-CeEEEEeC---CCcEEEccCCCCC--CCCCCCC----------hhhhhhhhccCCCCcee
Q 021484 186 MVGDRHVVNQLEPHPH--I-PMFATCGI---EKTVKLWAPMPTD--FPPLPDN----------AEKIMKANKQGREDHSR 247 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~--~-~~l~t~~~---d~~i~iwd~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~l 247 (312)
+.+|.+....+...-+ . ..++.+.. .+.++|-++.... ...+... .....-....+.....+
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 7888765544433211 1 13443332 2588888875431 1112111 01000011112234567
Q ss_pred EEecCCceEEEEEecccC
Q 021484 248 ITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 248 ~s~~~d~~i~i~~~~~~~ 265 (312)
.-.+.-|.++++|+.+..
T Consensus 275 yviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEEETTSEEEEEETTTCC
T ss_pred EEEeCCcEEEEEEcccCc
Confidence 778888999999998873
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.63 E-value=0.76 Score=37.85 Aligned_cols=152 Identities=16% Similarity=0.089 Sum_probs=79.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC----CCeEEEec
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISYN 107 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~~ 107 (312)
....|+|.|++ +++ ++..+|.|++++. +++ . .+..+. ...........|+++|+ +.++++..
T Consensus 30 ~P~~ia~~pdG-~l~-V~e~~g~I~~~d~-~G~-~-------~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 30 VPWSIAPLGGG-RYL-VTERPGRLVLISP-SGK-K-------LVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp CEEEEEEEETT-EEE-EEETTTEEEEECS-SCE-E-------EEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCeEEEEcCCC-eEE-EEeCCCEEEEEeC-CCc-e-------Eeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 46789999998 544 4556699998873 332 0 011100 11122356789999997 45555533
Q ss_pred ----C----CcEEEEEcCCCcCCCCCcCCcccccCCCC-CceEecccCCceeeEEEEecCCCCEEEEecc----------
Q 021484 108 ----D----ELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---------- 168 (312)
Q Consensus 108 ----d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~---------- 168 (312)
+ ..|..|+....... +...+. ...+..... .....++| .|+|.+.++.+.
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~---------~~~~~~l~~~~~~~~~-h~~~~l~~-~pDG~Lyvt~G~~~~~~~~~d~ 164 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFK---------LKEVKTLIDGIPGAYI-HNGGRIRF-GPDGMLYITTGDAADPRLAQDL 164 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCC---------EEEEEEEEEEEECCSS-CCCCCEEE-CTTSCEEEECCCTTCGGGGTCT
T ss_pred ccCCCCCcceEEEEEEECCCCcC---------cCccEEEEEcCCCCCC-cCCceEEE-CCCCcEEEEECCCCCCccccCC
Confidence 3 56777776542000 000011 111221110 11467888 899987666432
Q ss_pred ---CceEEEEeccCC--------eeEEEeecCccceEEEEEcC-CCCeEEEEe
Q 021484 169 ---CGHLFIWKKKGG--------KLVRLMVGDRHVVNQLEPHP-HIPMFATCG 209 (312)
Q Consensus 169 ---dg~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p-~~~~l~t~~ 209 (312)
.|.|.-++.... .....-.++. ....++|+| ++.++++-.
T Consensus 165 ~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 165 SSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEEC
T ss_pred CCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEec
Confidence 256666665421 0111112343 346899999 666655543
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.14 Score=41.86 Aligned_cols=146 Identities=15% Similarity=0.122 Sum_probs=77.0
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCC--CCcccccccccccCCCccEEEEEEccCCCeEEE--ecCCcEEEEEcCCC
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSD--TPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS--YNDELVYLFEKNMG 119 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s--~~d~~i~iwd~~~~ 119 (312)
.+++.++.||.|.-.|..+|+.....+.. .+.... ..... ..++..++. ..||.|+.++..++
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~------~~~~~-------~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEI------QEPSR-------LETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEEC------CCSCT-------TTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEe------cCCcc-------ccCCcEEEEEECCCCEEEEEECCCC
Confidence 47888999999999999998865443221 000000 00000 012334444 35888888887665
Q ss_pred cCCCCCcCCcccccCCCCCceEeccc--CCceeeE----EEE---ecCCCCEEEEeccCceEEEEeccCCeeEEEeecCc
Q 021484 120 LGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKG----VNF---FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 190 (312)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~----v~~---~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 190 (312)
.....+.... ...++.. +.. ....+..+++|+.+|.+...|+.+|+.+..+....
T Consensus 78 ----------------~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 78 ----------------LQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp ----------------EEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred ----------------cEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 2212221110 0000110 000 00146788999999999999999999998886321
Q ss_pred --cce-----EEEEEc-----CCCCeEEEEeCCCcEEEcc
Q 021484 191 --HVV-----NQLEPH-----PHIPMFATCGIEKTVKLWA 218 (312)
Q Consensus 191 --~~v-----~~~~~~-----p~~~~l~t~~~d~~i~iwd 218 (312)
+.+ .+.... ..+..++.+..+..+.+.+
T Consensus 142 ~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 142 KNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp BCC--------------------CCEEEEEEEEEECEECC
T ss_pred CcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 100 011110 1234566666677777766
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.99 E-value=1.3 Score=36.56 Aligned_cols=156 Identities=12% Similarity=0.202 Sum_probs=87.4
Q ss_pred ceEEEEEcC--CCC-cEEEEEeC--CCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe
Q 021484 32 RLNAIVIDP--RNP-NYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 106 (312)
Q Consensus 32 ~v~~~~~~p--~~~-~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~ 106 (312)
....+.+.+ ++. +++++-.. +.+|.+|++....- ... ....+....-.....+++.++|.+.++.
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~---------~~~-~~~~~~g~~~~~pND~~v~~~G~fyvt~ 182 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK---------SLL-HLKTIRHKLLPSVNDIVAVGPEHFYATN 182 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT---------EEE-EEEEECCTTCSSEEEEEEEETTEEEEEE
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC---------EEE-EEeccccCCCCCCceEEEeCCCCEEecC
Confidence 455666655 332 34454333 57788888764320 000 1111111223457889999999977774
Q ss_pred c----C--------------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEe-c
Q 021484 107 N----D--------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-S 167 (312)
Q Consensus 107 ~----d--------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~-~ 167 (312)
. | +.|+.++. + +. +.+...-.. .+.++| +|+++.|+.+ +
T Consensus 183 ~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~----------------~~-~~~~~~l~~--pNGia~-spDg~~lYvadt 240 (355)
T 3sre_A 183 DHYFIDPYLKSWEMHLGLAWSFVTYYSP--N----------------DV-RVVAEGFDF--ANGINI-SPDGKYVYIAEL 240 (355)
T ss_dssp SCSCSSHHHHHHHHHTTCCCEEEEEECT--T----------------CC-EEEEEEESS--EEEEEE-CTTSSEEEEEEG
T ss_pred CcEeCCcccccchhhccCCccEEEEEEC--C----------------eE-EEeecCCcc--cCcceE-CCCCCEEEEEeC
Confidence 2 1 23444433 2 22 222222222 688999 9999877655 4
Q ss_pred cCceEEEEeccC-Cee--EEEeecCccceEEEEEcC-CCCeEEEEeCC-CcEEEccCC
Q 021484 168 DCGHLFIWKKKG-GKL--VRLMVGDRHVVNQLEPHP-HIPMFATCGIE-KTVKLWAPM 220 (312)
Q Consensus 168 ~dg~v~iwd~~~-~~~--~~~~~~~~~~v~~~~~~p-~~~~l~t~~~d-~~i~iwd~~ 220 (312)
..+.|+.|++.. ++. ...+. ..+..-.++..+ +|++.+++..+ +.|..|+..
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 678999999863 332 22332 245667889998 58887777644 344444443
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.99 E-value=1.4 Score=37.23 Aligned_cols=195 Identities=10% Similarity=0.158 Sum_probs=115.9
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEE
Q 021484 35 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLF 114 (312)
Q Consensus 35 ~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iw 114 (312)
+.-.+|.. +.+|.-. ..++.|+|+++++-+ +.. . ..+.|.--.|-.+ +.|+--.+..|+-|
T Consensus 70 sAIMnP~~-~iiALra-g~~lQiFnle~K~kl--------------ks~-~-~~e~VvfWkWis~-~~l~lVT~taVyHW 130 (494)
T 1bpo_A 70 SAIMNPAS-KVIALKA-GKTLQIFNIEMKSKM--------------KAH-T-MTDDVTFWKWISL-NTVALVTDNAVYHW 130 (494)
T ss_dssp EEEECSSS-SCEEEEE-TTEEEEEETTTTEEE--------------EEE-E-CSSCCCEEEEEET-TEEEEECSSEEEEE
T ss_pred eeeeCCCC-cEEEEec-CCeEEEEchHHhhhh--------------cce-e-cCCCceEEEecCC-CeEEEEcCCeeEEe
Confidence 56678877 5666655 689999999988622 111 1 1345666667543 45555678899999
Q ss_pred EcCCCcCCCCCcCCcccccCCCCCceEecccC--CceeeEEEEecCCCCEEEEec-------cCceEEEEeccCCeeEEE
Q 021484 115 EKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGPNDEYVMSGS-------DCGHLFIWKKKGGKLVRL 185 (312)
Q Consensus 115 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~~s~~~~~l~~~~-------~dg~v~iwd~~~~~~~~~ 185 (312)
++.... .+.+.|.-|.. ...|..-.. +++.++++..+ -.|.+.+|+.+. +.-+.
T Consensus 131 si~~~s---------------~P~kvFdR~~~L~~~QIInY~~-d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ 193 (494)
T 1bpo_A 131 SMEGES---------------QPVKMFDRHSSLAGCQIINYRT-DAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQP 193 (494)
T ss_dssp ESSSSC---------------CCEEEEECCGGGTTCEEEEEEE-CTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEE
T ss_pred cccCCC---------------CchhheecchhcccceEEEEEE-CCCCCeEEEEeecccCCcccceEEEeeccc-cccch
Confidence 997532 45566665432 122556555 88889877543 257788998874 44567
Q ss_pred eecCccceEEEEEcCCC---CeEEEEeCC---CcEEEccCCCCC--CCCCCC----------ChhhhhhhhccCCCCcee
Q 021484 186 MVGDRHVVNQLEPHPHI---PMFATCGIE---KTVKLWAPMPTD--FPPLPD----------NAEKIMKANKQGREDHSR 247 (312)
Q Consensus 186 ~~~~~~~v~~~~~~p~~---~~l~t~~~d---~~i~iwd~~~~~--~~~~~~----------~~~~~~~~~~~~~~~~~l 247 (312)
+.+|.+....+...-+. ..++.+... +.++|-++.... ...+.. ......-....+.....+
T Consensus 194 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygvi 273 (494)
T 1bpo_A 194 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 273 (494)
T ss_dssp ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEE
T ss_pred heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEE
Confidence 78887655444442211 234444432 788888875431 111111 011111111122334567
Q ss_pred EEecCCceEEEEEecccC
Q 021484 248 ITLTPDVIMHVLRLQRRQ 265 (312)
Q Consensus 248 ~s~~~d~~i~i~~~~~~~ 265 (312)
.-.+.-|.++++|+.+..
T Consensus 274 yviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGT 291 (494)
T ss_dssp EEEETTSEEEEEETTTCC
T ss_pred EEEecCceEEEEecccce
Confidence 778889999999998873
No 327
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.96 E-value=1.3 Score=36.49 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=60.9
Q ss_pred ccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec----ccCCceeeEEEEecCC---CC
Q 021484 89 IHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG----HRNSQTVKGVNFFGPN---DE 161 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~v~~~s~~---~~ 161 (312)
.....++|.|+|+++++-.++.|++++. .+ + ..+.. .........+++ +|+ +.
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G----------------~--~~~~~~~v~~~g~~g~~gia~-~pdf~~~g 88 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SG----------------K--KLVASFDVANVGEAGLLGLAL-HPEFPKKS 88 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SC----------------E--EEEEECCCCCSTTCSEEEEEE-CTTTTTSC
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CC----------------c--eEeeccceeecCCCceeeEEe-CCCCCcCC
Confidence 4567999999999888877799999863 33 1 11110 011122788999 887 45
Q ss_pred EEEEecc----C----ceEEEEeccCC-------eeE-EEeec-CccceEEEEEcCCCCeEEEEe
Q 021484 162 YVMSGSD----C----GHLFIWKKKGG-------KLV-RLMVG-DRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 162 ~l~~~~~----d----g~v~iwd~~~~-------~~~-~~~~~-~~~~v~~~~~~p~~~~l~t~~ 209 (312)
.|+++.. + ..|..|+.... +.+ ..+.. .......++|.|+|.++++.+
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 5544433 3 67888876643 111 12221 112346799999998766654
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.93 E-value=1.3 Score=43.40 Aligned_cols=206 Identities=11% Similarity=0.052 Sum_probs=107.5
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEE-Ee-c--
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-N-- 107 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~-~-- 107 (312)
+|.-=.|-.. +.|+..+ +..|+-|++.... .|+.-|.....+. ...|..-.-+++.+.++ .| +
T Consensus 107 ~VvfWkWis~--~~l~lVT-~~aVyHW~~~~~s--------~P~k~fdR~~~L~--~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 107 DVTFWKWISL--NTVALVT-DNAVYHWSMEGES--------QPVKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred CceEEEecCC--CeeEEEc-CCeEEEeccCCCC--------ccHHHHhcchhcc--cCeeEEeeeCCCCCeEEEEeeccC
Confidence 4444455443 3444443 3568888886422 2333332222212 35566777788887443 23 1
Q ss_pred ----CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEe-cCC-CCEEEEec---cCceEEEEecc
Q 021484 108 ----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF-GPN-DEYVMSGS---DCGHLFIWKKK 178 (312)
Q Consensus 108 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~-s~~-~~~l~~~~---~dg~v~iwd~~ 178 (312)
.|.+.+|..+.+ ..+.+.||... ...+... .+. .+.+..+. ..+.++|-++.
T Consensus 174 ~~~v~G~mQLyS~er~-----------------~sQ~iegha~~--F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~ 234 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRK-----------------VSQPIEGHAAS--FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 234 (1630)
T ss_pred CCcccceeeeeecccc-----------------cchhhhHhHhh--hheeccCCCCCCceEEEEEEecCCCceEEEEecC
Confidence 467888888764 55666676543 2222220 111 12222221 13688888874
Q ss_pred CC---ee------EEEeec---CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC-CCCCCChhhhhhhhccCCCCc
Q 021484 179 GG---KL------VRLMVG---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDH 245 (312)
Q Consensus 179 ~~---~~------~~~~~~---~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 245 (312)
.. .+ +..+.. -..-...+..++....+...+.-|.|.++|+.++.. ..-+-....++... ......
T Consensus 235 ~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~-~~~~~~ 313 (1630)
T 1xi4_A 235 TPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA-PHEATA 313 (1630)
T ss_pred CCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEec-cCCCCC
Confidence 32 11 111110 112234577777777777778889999999999874 22222333332222 223344
Q ss_pred eeEEecCCceEEEEEecccCcccee
Q 021484 246 SRITLTPDVIMHVLRLQRRQTLAYR 270 (312)
Q Consensus 246 ~l~s~~~d~~i~i~~~~~~~~~~~~ 270 (312)
-++.....|.+.-..+...+...|+
T Consensus 314 g~~~vnr~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 314 GIIGVNRKGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred ceEEEcCCceEEEEEEccchhhhhH
Confidence 5566667777766666666555444
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.53 E-value=1.7 Score=35.78 Aligned_cols=153 Identities=11% Similarity=0.113 Sum_probs=77.9
Q ss_pred ceEEEEEcCCCCc-EEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC----CCeEEEe
Q 021484 32 RLNAIVIDPRNPN-YFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISY 106 (312)
Q Consensus 32 ~v~~~~~~p~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~s~ 106 (312)
....|+|.|++ + ++ ++...|.|++++.. ++... .+... ..+..........|+++|+ +.+.++.
T Consensus 19 ~P~~i~~~pdG-~~l~-V~e~~G~i~~~~~~-g~~~~------~~~~~--~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 19 HPWALAFLPDN-HGML-ITLRGGELRHWQAG-KGLSA------PLSGV--PDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SEEEEEECSTT-CCEE-EEETTTEEEEEETT-TEECC------CCBSC--CCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CcEEEEEcCCC-CEEE-EEeCCceEEEEeCC-Cceee------EecCC--cccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 36799999998 6 55 44567999999853 33211 11110 0111222345789999995 5544443
Q ss_pred -c-------CCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEeccc----CCceeeEEEEecCCCCEEEEecc------
Q 021484 107 -N-------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSD------ 168 (312)
Q Consensus 107 -~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~s~~~~~l~~~~~------ 168 (312)
. ...|..|++..... . +. .....+.... .......++| .|+|.+.++.+.
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~----~-----~~--~~~~i~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~Gd~~~~~~ 155 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLS----K-----VT--DFRTVFRQMPKLSTGNHFGGRLVF-DGKGYLFIALGENNQRPT 155 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSS----B-----EE--EEEEEEECSSCCBSSSCCCCCEEE-CSSSEEEEEECCTTCGGG
T ss_pred eCCCCCCCceeEEEEEEECCCCC----C-----CC--ceEEEEEECCCCCCCcccCccEEE-CCCCcEEEEECCCCCCCc
Confidence 2 12466666543200 0 00 0001111110 0011457898 899976665433
Q ss_pred -------CceEEEEeccCCe------------eEEEe-ecCccceEEEEEcC-CCCeEEEE
Q 021484 169 -------CGHLFIWKKKGGK------------LVRLM-VGDRHVVNQLEPHP-HIPMFATC 208 (312)
Q Consensus 169 -------dg~v~iwd~~~~~------------~~~~~-~~~~~~v~~~~~~p-~~~~l~t~ 208 (312)
.|.|.-++....- ....+ .++. ....++|+| ++.++++-
T Consensus 156 ~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 156 AQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp GGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEE
T ss_pred cCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEe
Confidence 2467777765320 11122 2343 467899999 56655543
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.33 E-value=1.6 Score=34.96 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=37.4
Q ss_pred CCCEEEEecc------CceEEEEeccCCeeEEEe--ecCccceEEEEEcCCCCeEEEEeCC-----CcEEEccCCCCCCC
Q 021484 159 NDEYVMSGSD------CGHLFIWKKKGGKLVRLM--VGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFP 225 (312)
Q Consensus 159 ~~~~l~~~~~------dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~ 225 (312)
++++++.|+. -..+.+||+.+.+....- .........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 5677777764 235899999877643321 111111122222 56777777643 35778998887643
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.11 E-value=0.67 Score=45.28 Aligned_cols=150 Identities=10% Similarity=0.170 Sum_probs=94.9
Q ss_pred EEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceE
Q 021484 93 GLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 172 (312)
Q Consensus 93 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v 172 (312)
+.-.+|..+++|--...++.|||+.+. ..++.+.-. ..|.--.|.++ +.|+..+ +..|
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnl~~k----------------~klks~~~~---e~VvfWkWis~--~~l~lVT-~~aV 127 (1630)
T 1xi4_A 70 SAIMNPASKVIALKAGKTLQIFNIEMK----------------SKMKAHTMT---DDVTFWKWISL--NTVALVT-DNAV 127 (1630)
T ss_pred hhccCCCcceEEEecCCeEEEeehHHh----------------hhhcccccC---CCceEEEecCC--CeeEEEc-CCeE
Confidence 445688888777767889999999876 444444322 33777777443 3343333 4579
Q ss_pred EEEeccC-CeeEEEeecC----ccceEEEEEcCCCCeEEEEe-------CCCcEEEccCCCCCCCCCCCChhhhhhhhcc
Q 021484 173 FIWKKKG-GKLVRLMVGD----RHVVNQLEPHPHIPMFATCG-------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 240 (312)
Q Consensus 173 ~iwd~~~-~~~~~~~~~~----~~~v~~~~~~p~~~~l~t~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 240 (312)
+-|++.. ..+++.+..| ...|..-..+++.++++..| ..|.+.+|+.+.+....+.+|.........-
T Consensus 128 yHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~ 207 (1630)
T 1xi4_A 128 YHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKME 207 (1630)
T ss_pred EEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccC
Confidence 9999863 4555555555 34676777788999865443 3588999999888777777776655322211
Q ss_pred C-CCCceeEEecC----CceEEEEEeccc
Q 021484 241 G-REDHSRITLTP----DVIMHVLRLQRR 264 (312)
Q Consensus 241 ~-~~~~~l~s~~~----d~~i~i~~~~~~ 264 (312)
. +....++++.. .+.++|.++...
T Consensus 208 ~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred CCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 1 12233444333 378999988543
No 332
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.97 E-value=2.2 Score=34.99 Aligned_cols=143 Identities=9% Similarity=0.127 Sum_probs=85.9
Q ss_pred cEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEcc----CCC---eEEEe--c--CCcEE
Q 021484 44 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN----TSE---LLISY--N--DELVY 112 (312)
Q Consensus 44 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~---~l~s~--~--d~~i~ 112 (312)
.+++.....+-+.+||+ +++.+. .+ . .+.+..+..-| .|+ +++++ . +++|.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~--------------~~-~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLH--------------SY-N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEE--------------EE-C--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEE--------------Ec-c--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 45666677789999999 555321 11 1 13344444444 232 33333 3 57899
Q ss_pred EEEcCCCcCCCCCcCCcccccCCCCCceEecc-----cCCceeeEEEEe-cC-CCC-EEEEeccCceEEEEecc------
Q 021484 113 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-----RNSQTVKGVNFF-GP-NDE-YVMSGSDCGHLFIWKKK------ 178 (312)
Q Consensus 113 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~-s~-~~~-~l~~~~~dg~v~iwd~~------ 178 (312)
+|++.... ..+..+... .....+..+|++ ++ .+. ++++...+|.+..|++.
T Consensus 103 vf~iDp~~---------------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 103 IYAIDGKN---------------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp EEEECTTT---------------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred EEEECCCC---------------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 99874221 122222110 000225556653 44 343 68888889999999873
Q ss_pred -CCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCC
Q 021484 179 -GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 220 (312)
Q Consensus 179 -~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~ 220 (312)
+.+.++++... +.+-.+...+....|..+-++.-|..++.+
T Consensus 168 ~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 168 ISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 34667777644 467888899999999999988766666644
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.91 E-value=1.9 Score=36.80 Aligned_cols=106 Identities=10% Similarity=0.134 Sum_probs=60.2
Q ss_pred ccEEEEEEccCCCeEEEecC-CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEec----ccCCceeeEEEEecCC---C
Q 021484 89 IHITGLAYSNTSELLISYND-ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG----HRNSQTVKGVNFFGPN---D 160 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~v~~~s~~---~ 160 (312)
.....|+|.|+|+++++-.. +.|++++..++.. ..+..+.. .....-+..++| +|+ +
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~--------------~~~~~~~~~~~~~~g~~Gllgia~-~Pdf~~~ 91 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSV--------------KTVFQVPEIVNDADGQNGLLGFAF-HPDFKNN 91 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--------------EEEEECTTCCCCTTSSCSEEEEEE-CTTTTTS
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE--------------eEEecCCccccccCCCCceeEEEE-CCCcCcC
Confidence 45679999999998888765 4788887644310 00111110 001122779999 885 5
Q ss_pred CEEEEecc-------------CceEEEEeccCC--e-----eEE-Eeec-CccceEEEEEcCCCCeEEEEe
Q 021484 161 EYVMSGSD-------------CGHLFIWKKKGG--K-----LVR-LMVG-DRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 161 ~~l~~~~~-------------dg~v~iwd~~~~--~-----~~~-~~~~-~~~~v~~~~~~p~~~~l~t~~ 209 (312)
.+|+.+.. ...|.-+++... + .+. .+.. ..+....++|.|+|.+.++.+
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 55544432 235666665422 1 111 1221 123468899999999876655
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.68 E-value=2.9 Score=35.45 Aligned_cols=192 Identities=9% Similarity=0.102 Sum_probs=112.9
Q ss_pred CeeecccC-ccceeeEEecccccCCcCCCCccceEEEEEcCCCCcEEEEEe------CCCeEEEEEccCCeecCCCCCCC
Q 021484 1 MWQFDLRS-DSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG------SDEYARVYDIRKCHWYSPISSDT 73 (312)
Q Consensus 1 v~~wd~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~ 73 (312)
|..|++.. ..+.+++.-+..- ....|..-..+++..-++++|- -.|.+.+|..+.+.
T Consensus 127 VyHWsi~~~s~P~kvFdR~~~L-------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--------- 190 (494)
T 1bpo_A 127 VYHWSMEGESQPVKMFDRHSSL-------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--------- 190 (494)
T ss_dssp EEEEESSSSCCCEEEEECCGGG-------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC---------
T ss_pred eEEecccCCCCchhheecchhc-------ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc---------
Confidence 46788864 2355555443221 1346778888888843444442 34778888887543
Q ss_pred CcccccccccccCCCccEEEEEEccCCC---eEEEec----CCcEEEEEcCCCcCCCCCcCCcccccCCCCCce-Eeccc
Q 021484 74 PVDTFCPRHLIGKNNIHITGLAYSNTSE---LLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGHR 145 (312)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 145 (312)
...+.+|...-..+....+.. +++.+. .++++|-++....... ..++ + +.... +....
T Consensus 191 -------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~-----k-k~vdv~fppe~ 256 (494)
T 1bpo_A 191 -------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFP-----K-KAVDVFFPPEA 256 (494)
T ss_dssp -------EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC-CCCC-----C-EEEECCCCTTS
T ss_pred -------cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC-CCcc-----c-eeeeeeCCccc
Confidence 233367765554444432221 333332 3789999985431000 0000 0 01110 11111
Q ss_pred CCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCC
Q 021484 146 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 223 (312)
Q Consensus 146 ~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 223 (312)
.....-++.. ++....++.-+.-|.|++||+.++.++..-+-....|..-+.+....-++.....|.|.--.+....
T Consensus 257 ~~DFPvamqv-s~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 257 QNDFPVAMQI-SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp TTCCEEEEEE-ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred ccCceeEEEe-cccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 1122445666 7778888888999999999999999988777666777666666666677777788888777666554
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.56 E-value=2.3 Score=34.04 Aligned_cols=136 Identities=8% Similarity=0.007 Sum_probs=73.2
Q ss_pred EEccCCCeEEEec---C--CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc-
Q 021484 95 AYSNTSELLISYN---D--ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD- 168 (312)
Q Consensus 95 ~~~~~~~~l~s~~---d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~- 168 (312)
.|+++++.|+-.. + ..|+..++... ..+.+..+. + .++ +++++.|+-.+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-----------------~~~~lt~~~----~--~~~-~~~g~~iy~t~~g 165 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGE-----------------EKKKIKNHY----L--FTC-NTSDRYFYYNNPK 165 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSC-----------------CCEEEESSC----C--CCS-EEETTEEEEECTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCC-----------------CeEEEeCCC----c--eEe-eEECCEEEEEeCC
Confidence 6778888665432 3 34555565542 334444332 2 234 566777765444
Q ss_pred CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEeCC--CcEEEccCCCCCCCCCCCChhhhhhhhccCCCCce
Q 021484 169 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 246 (312)
Q Consensus 169 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
...|.+-++..+.....+. +... ..++|++.+|+-.... ..|..-++.+.....+.... + .++.+.+.+
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~--~---~~~~~~g~~ 236 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEAN--I---EHYNVYGSL 236 (302)
T ss_dssp TCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSC--E---EEEEEETTE
T ss_pred CceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCC--c---ceEEECCCE
Confidence 6788888887766544333 2222 3356999987766543 35666677766544443211 1 234555555
Q ss_pred eEEe--cCCceEEEEEecc
Q 021484 247 RITL--TPDVIMHVLRLQR 263 (312)
Q Consensus 247 l~s~--~~d~~i~i~~~~~ 263 (312)
+.-. .....|..-++..
T Consensus 237 Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEEECCCCcEEEEEECCC
Confidence 5433 2234455555443
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.37 E-value=2.6 Score=34.53 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=61.9
Q ss_pred CccEEEEEEccCCCeEEEec-CCcEEEEEcCCCcCCCCCcCCcccccCCCCCc----eEecccCCceeeEEEEecCC---
Q 021484 88 NIHITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ----VYSGHRNSQTVKGVNFFGPN--- 159 (312)
Q Consensus 88 ~~~i~~~~~~~~~~~l~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~v~~~s~~--- 159 (312)
-.....|+|.|+|.++++-. .|.|++++..++.. ..+. .+..... -...+++ +|+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~--------------~~v~~~~~v~~~g~~--GllGia~-~Pdf~~ 93 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK--------------TELGEVPGVSPSGEG--GLLGIAL-SPDYAS 93 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--------------EEEEECTTCCCBTTB--SEEEEEE-CTTHHH
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE--------------eeecccCceeecCCC--CceeeEe-cccccc
Confidence 34578999999999999986 89999997654310 0010 1111122 2789999 885
Q ss_pred CCEEEEe---ccCceEEEEeccCC----------eeE-EEee-cCccceEEEEEcCCCCeEEEEe
Q 021484 160 DEYVMSG---SDCGHLFIWKKKGG----------KLV-RLMV-GDRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 160 ~~~l~~~---~~dg~v~iwd~~~~----------~~~-~~~~-~~~~~v~~~~~~p~~~~l~t~~ 209 (312)
..+|+.. ..++.|.-|.+..+ +.+ ..+. ...+....+.|.|+|.+.++.+
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 3444432 34556666665431 112 1222 1112345799999998877654
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.88 E-value=3.8 Score=33.39 Aligned_cols=52 Identities=13% Similarity=-0.031 Sum_probs=26.2
Q ss_pred eEEEEeccCCee--EEEeecCccceEEEEEcCCCCeEEEEeCCC------cEEEccCCCCCC
Q 021484 171 HLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFATCGIEK------TVKLWAPMPTDF 224 (312)
Q Consensus 171 ~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~------~i~iwd~~~~~~ 224 (312)
.+.+||+.+.+. +..+......-..+. -++++++.|+.++ .|.++++++++.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 577899876543 333322222222222 3677888888543 355567777764
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.85 E-value=7.5 Score=35.55 Aligned_cols=173 Identities=12% Similarity=0.045 Sum_probs=94.6
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCccccccccccc-CCCccEEEEEEccCCCeEEEecCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
..|.++.-.+++ ++ -.|+ ++-+..|+..+++... +....... .....|.++.-.++|.+.+++..+
T Consensus 373 ~~v~~i~~d~~g-~l-Wigt-~~GL~~~~~~~~~~~~----------~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~ 439 (758)
T 3ott_A 373 NRIRHIYEDKEQ-QL-WIAT-DGSINRYDYATRQFIH----------YNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLG 439 (758)
T ss_dssp SCEEEEEECTTS-CE-EEEE-TTEEEEEETTTTEEEE----------EEEECCC--CBSSSEEEEEECTTSEEEEEESSS
T ss_pred CceEEEEECCCC-CE-EEEe-CCcHhhcCcCCCcEEE----------eecCCCcCCCCCceEEEEEEcCCCCEEEEECCC
Confidence 458888888877 33 4455 4578889988765321 00000000 023468888888888877766666
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEecc--cCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
-|.++|..+........ + .....+... .....|.++.. +.++++.+.++..+-|..+|..+++......
T Consensus 440 Gl~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~ 510 (758)
T 3ott_A 440 GIFVVDKHKLMQSTSGQ-----Y---IAEQNYSVHNGLSGMFINQIIP-DNEGNVWVLLYNNKGIDKINPRTREVTKLFA 510 (758)
T ss_dssp CEEEEEHHHHHHCCSSE-----E---ECSEEECGGGTCSCSCEEEEEE-CTTSCEEEEETTCSSEEEEETTTTEEEEECT
T ss_pred ceEEEccccccccCCcc-----e---ecccccccccccccceeeeEEE-cCCCCEEEEccCCCCcEEEeCCCCceEEecC
Confidence 78888864310000000 0 000111101 01123888877 7888876633333558889988776443221
Q ss_pred c---CccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCC
Q 021484 188 G---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL 227 (312)
Q Consensus 188 ~---~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~ 227 (312)
. ....+.++....+|.+.+.. .. -|..++..+.....+
T Consensus 511 ~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~ 551 (758)
T 3ott_A 511 DELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDESQQSI 551 (758)
T ss_dssp TTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CCCCBC
T ss_pred CCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCceEEe
Confidence 1 12457788888888876543 34 488888877665433
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.76 E-value=7.7 Score=35.49 Aligned_cols=154 Identities=14% Similarity=0.146 Sum_probs=86.1
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCC
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 109 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~ 109 (312)
...|.++.-..++ .|..|+.+| +..||..+.+... .. ......|.++.. .+|.+.+++.+
T Consensus 62 ~~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~~~f~~------------~~---~~~~~~i~~i~~-~~g~lWigt~~- 121 (758)
T 3ott_A 62 NTRIYCGVIIDNT--YLYMGTDNG-ILVYNYRADRYEQ------------PE---TDFPTDVRTMAL-QGDTLWLGALN- 121 (758)
T ss_dssp SSCEEEEEEETTT--EEEEEETTE-EEEEETTTTEECC------------CS---CCCCSCEEEEEE-ETTEEEEEETT-
T ss_pred CceEEEEEEcCCC--cEEEEeCCC-eEEEeCCCCEEEC------------cc---cCCCceEEEEEe-cCCcEEEEcCC-
Confidence 3468888877766 555666655 7789988765321 00 111234666654 45665555444
Q ss_pred cEEEEEcCCCcCCCCCcCCcccccCCCCCceEec---ccCCceeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEe
Q 021484 110 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG---HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 186 (312)
Q Consensus 110 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 186 (312)
-|..|+..+. ....+.. ......|.++.. ..++.+.+ |+.. -|..++..+++.....
T Consensus 122 Gl~~~~~~~~-----------------~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 122 GLYTYQLQSR-----------------KLTSFDTRRNGLPNNTIYSIIR-TKDNQIYV-GTYN-GLCRYIPSNGKFEGIP 181 (758)
T ss_dssp EEEEEETTTC-----------------CEEEECHHHHCCSCSCEEEEEE-CTTCCEEE-EETT-EEEEEETTTTEEEEEC
T ss_pred cceeEeCCCC-----------------eEEEeccCCCCcCCCeEEEEEE-cCCCCEEE-EeCC-CHhhCccCCCceEEec
Confidence 6888887654 2222210 011123778876 66776655 4444 5778887766543211
Q ss_pred -ecC----ccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCC
Q 021484 187 -VGD----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 224 (312)
Q Consensus 187 -~~~----~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 224 (312)
... ...|.++...+++..|-.++. +-|..++..++..
T Consensus 182 ~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 182 LPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp CCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred CCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 111 124788888777664333443 4577888776543
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.10 E-value=7.5 Score=34.13 Aligned_cols=113 Identities=6% Similarity=-0.079 Sum_probs=68.0
Q ss_pred cEEEEEEccCCCeEEEe--cCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEec
Q 021484 90 HITGLAYSNTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 167 (312)
Q Consensus 90 ~i~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~ 167 (312)
....+..+|+|++++.+ .+.++.++++..........+ ...+....-+...+ .-....+| +++|+...+..
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~-----~~~~~~~~ae~e~G-lGPlHt~F-d~~G~aYTtlf 396 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL-----ADPRDVIVGEPELG-LGPLHTTF-DGRGNAYTTLF 396 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC-----SCGGGGEEECCBCC-SCEEEEEE-CSSSEEEEEET
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc-----cCcccceEeeccCC-CcccEEEE-CCCCceEeeee
Confidence 34567899999987775 399999999975310000000 00000001111111 22678888 89997667778
Q ss_pred cCceEEEEeccCC----------eeEEEeecCccceEEE-----EEcCCCCeEEEEe
Q 021484 168 DCGHLFIWKKKGG----------KLVRLMVGDRHVVNQL-----EPHPHIPMFATCG 209 (312)
Q Consensus 168 ~dg~v~iwd~~~~----------~~~~~~~~~~~~v~~~-----~~~p~~~~l~t~~ 209 (312)
-|..|..|++... ..+..+..|-.+-.-. .-.|+|++|++.+
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 8999999998643 3455666565432221 2357899998886
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.97 E-value=5.7 Score=32.53 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=58.7
Q ss_pred ccEEEEEEccCCC-eEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCC---CCEEE
Q 021484 89 IHITGLAYSNTSE-LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN---DEYVM 164 (312)
Q Consensus 89 ~~i~~~~~~~~~~-~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~---~~~l~ 164 (312)
.....|+|.|+|+ ++++-..+.|++++....... .. . .....+...... ...+++ +|+ +.+|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~-----~~---~--~~~~v~~~g~~g--~~gia~-~pdf~~~g~lY 84 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSA-----PL---S--GVPDVWAHGQGG--LLDVVL-APDFAQSRRIW 84 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECC-----CC---B--SCCCCCCSTTCS--EEEEEE-CTTHHHHCEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceee-----Ee---c--CCcccccCCCCC--ceeEEE-CCCCCCCCEEE
Confidence 3567999999999 888877899999985332000 00 0 000011111222 688998 885 44454
Q ss_pred Eec-c-------CceEEEEeccCC--e--eEE-Eeec------CccceEEEEEcCCCCeEEEEe
Q 021484 165 SGS-D-------CGHLFIWKKKGG--K--LVR-LMVG------DRHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 165 ~~~-~-------dg~v~iwd~~~~--~--~~~-~~~~------~~~~v~~~~~~p~~~~l~t~~ 209 (312)
.+. . ...|..+++... + ... .+.. .......++|.|+|.+.++.+
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 442 2 235666666432 1 111 1111 112235799999997766654
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.85 E-value=5 Score=32.67 Aligned_cols=21 Identities=14% Similarity=0.053 Sum_probs=14.2
Q ss_pred CCCcEEEEEeC-CCeEEEEEccC
Q 021484 41 RNPNYFAVGGS-DEYARVYDIRK 62 (312)
Q Consensus 41 ~~~~~l~~~~~-dg~i~iwd~~~ 62 (312)
++ .+++.|+. ...+.+||+.+
T Consensus 19 ~~-~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 ND-TVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TT-EEEEECGGGTTCEEEEETTS
T ss_pred CC-EEEEEeCcCCCeEEEEcccc
Confidence 44 67777764 35688889864
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.95 E-value=5.1 Score=35.14 Aligned_cols=84 Identities=8% Similarity=-0.003 Sum_probs=50.4
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-cCCc
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 110 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~d~~ 110 (312)
....+..+|+|..+++.|-.+.++.++|+......-.-....+ +....... . -.-...-.+|.++|....+. -|.+
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~-~~~~~ae~-e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP-RDVIVGEP-E-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG-GGGEEECC-B-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc-ccceEeec-c-CCCcccEEEECCCCceEeeeeecce
Confidence 4557889999966667777899999999985321000000000 00000111 1 13345677999999544444 4999
Q ss_pred EEEEEcCC
Q 021484 111 VYLFEKNM 118 (312)
Q Consensus 111 i~iwd~~~ 118 (312)
|..|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999964
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.57 E-value=18 Score=34.28 Aligned_cols=38 Identities=13% Similarity=-0.029 Sum_probs=32.2
Q ss_pred eeeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 149 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 149 ~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
.+.+++. .++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~-~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEE-ETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEee-cCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3667776 6788899999999999999999999987653
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.35 E-value=15 Score=31.44 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=23.5
Q ss_pred ccEEEEEEccCCC--eEEEecCCcEEEEEcC
Q 021484 89 IHITGLAYSNTSE--LLISYNDELVYLFEKN 117 (312)
Q Consensus 89 ~~i~~~~~~~~~~--~l~s~~d~~i~iwd~~ 117 (312)
...+.|+|.|+|. +|++-..|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3567899999995 8888789999999753
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.20 E-value=0.74 Score=37.62 Aligned_cols=106 Identities=9% Similarity=0.084 Sum_probs=63.1
Q ss_pred CCEEEEeccCceEEEEeccCCeeEEEeecC-ccceEEEEE--cCCCCeEEEE--eCCCcEEEccCCCCCCCCCCCChhhh
Q 021484 160 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-RHVVNQLEP--HPHIPMFATC--GIEKTVKLWAPMPTDFPPLPDNAEKI 234 (312)
Q Consensus 160 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~--~p~~~~l~t~--~~d~~i~iwd~~~~~~~~~~~~~~~~ 234 (312)
+..++.++.||.|+-+|..+|+.+-.++.. ..++....- .+.+..++.+ +.||.|..++..++... ........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccc
Confidence 346888999999999999999988777643 122222110 0112233333 57999999998766321 11111122
Q ss_pred hhhhccC-------------CCCceeEEecCCceEEEEEecccCc
Q 021484 235 MKANKQG-------------REDHSRITLTPDVIMHVLRLQRRQT 266 (312)
Q Consensus 235 ~~~~~~~-------------~~~~~l~s~~~d~~i~i~~~~~~~~ 266 (312)
+...... ..+..+++++.++.+...|+.+++.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 1110000 1456778999999999888877643
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=85.19 E-value=29 Score=33.69 Aligned_cols=69 Identities=9% Similarity=-0.075 Sum_probs=45.1
Q ss_pred eeeEEEEecCC------CCEEEEecc-CceEEEEeccCCeeEEEeecC-ccceEEEEEc--CCCCeEEEEeCCCcEEEcc
Q 021484 149 TVKGVNFFGPN------DEYVMSGSD-CGHLFIWKKKGGKLVRLMVGD-RHVVNQLEPH--PHIPMFATCGIEKTVKLWA 218 (312)
Q Consensus 149 ~v~~v~~~s~~------~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~--p~~~~l~t~~~d~~i~iwd 218 (312)
.|.|+++ .+. +.+++.|.. |++|+|+++.+.+.+...... ...+.++.+. ....+|..|-.||.+.-+.
T Consensus 555 evscl~i-~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 555 EVACLDI-TPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp CEEEEEC-CCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred ceEEEEe-ecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 3899998 543 468999986 999999999887766543321 1233444332 2334677787888875544
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.40 E-value=23 Score=32.03 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=37.5
Q ss_pred CCCcEEEEEeCCC--eEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccC-CCeEEEe-c--C-----C
Q 021484 41 RNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELLISY-N--D-----E 109 (312)
Q Consensus 41 ~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~s~-~--d-----~ 109 (312)
++ .+++.|+.++ .+.+||+.+..+........ .......| .++.+..+ +++++.| . + .
T Consensus 500 ~~-~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~------~p~~r~~~----~a~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 500 DG-NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE------FFQNSLVS----AGLEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp TS-CEEEECCBCSSCSEEEEETTTTEEEECCCSSG------GGGSCCBS----CEEEEETTTTEEEEECCBCTTSSCBCC
T ss_pred CC-EEEEECCCCCCCCEEEEECCCCceEEccCCCC------CCCcccce----eEEEEeCCCCEEEEECCcCCCCCeeeC
Confidence 55 7888887654 79999999887543211000 00000122 23445555 5555554 3 2 3
Q ss_pred cEEEEEcCCC
Q 021484 110 LVYLFEKNMG 119 (312)
Q Consensus 110 ~i~iwd~~~~ 119 (312)
.+.+||+.+.
T Consensus 569 ~v~~yd~~~~ 578 (695)
T 2zwa_A 569 KAIIFKYDAE 578 (695)
T ss_dssp EEEEEEECTT
T ss_pred cEEEEEccCC
Confidence 5889998775
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.29 E-value=26 Score=31.72 Aligned_cols=152 Identities=14% Similarity=0.206 Sum_probs=77.8
Q ss_pred CCCcEEEEEeCC------CeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEe-c--CCcE
Q 021484 41 RNPNYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N--DELV 111 (312)
Q Consensus 41 ~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~--d~~i 111 (312)
++ .+++.|+.+ ..+.+||..+.++...... + .....| +.+...++++++.| . ++.+
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~--------p-~~R~~h-----~~~~~~~~~iyv~GG~~~~~~v 515 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL--------S-HTRFRH-----SACSLPDGNVLILGGVTEGPAM 515 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC--------S-BCCBSC-----EEEECTTSCEEEECCBCSSCSE
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC--------C-CCcccc-----eEEEEcCCEEEEECCCCCCCCE
Confidence 55 788888754 3578899988765432110 0 000111 22232367766664 3 2379
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCce---EecccCCceeeEEEEecCC-CCEEEEecc--C-----ceEEEEeccCC
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQV---YSGHRNSQTVKGVNFFGPN-DEYVMSGSD--C-----GHLFIWKKKGG 180 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~v~~~s~~-~~~l~~~~~--d-----g~v~iwd~~~~ 180 (312)
.+||..+.. |. .+.. +...... ...+.+ ... +++++.|+. + ..+.+||+.+.
T Consensus 516 ~~yd~~t~~---------W~-----~~~~~g~~p~~r~~--~~a~v~-~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 516 LLYNVTEEI---------FK-----DVTPKDEFFQNSLV--SAGLEF-DPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEEETTTTE---------EE-----ECCCSSGGGGSCCB--SCEEEE-ETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EEEECCCCc---------eE-----EccCCCCCCCcccc--eeEEEE-eCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 999987641 11 1110 1111111 233444 444 667777765 2 46889998877
Q ss_pred ee-----EEEeec----CccceEEEEEcCCCCeEEEEeCC--------CcEEEccCCCCCCC
Q 021484 181 KL-----VRLMVG----DRHVVNQLEPHPHIPMFATCGIE--------KTVKLWAPMPTDFP 225 (312)
Q Consensus 181 ~~-----~~~~~~----~~~~v~~~~~~p~~~~l~t~~~d--------~~i~iwd~~~~~~~ 225 (312)
+. -..+.. ..... +++...++.+++.|+.+ ..|.+||+.+.+..
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred ccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 61 122211 11111 22223336777777742 45888888877643
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.12 E-value=17 Score=28.64 Aligned_cols=144 Identities=10% Similarity=0.101 Sum_probs=67.8
Q ss_pred ccEEEEEEccCCCeEEEecCCcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEecc
Q 021484 89 IHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD 168 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~ 168 (312)
..|..++......+++ . +|.|+.|-..... ++-. ..... ..|..++. ... ..++. .
T Consensus 102 ~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~g---------------qlg~-~~~~~--~~i~~i~~-G~~-~~~~l-~- 157 (282)
T 3qhy_B 102 SGVDAIAAGAWASYAL-K-DGKVIAWGDDSDG---------------QTTV-PAEAQ--SGVTALDG-GVY-TALAV-K- 157 (282)
T ss_dssp SSEEEEEEETTEEEEE-E-TTEEEEEECCTTS---------------TTSC-CGGGG--SSEEEEEE-CSS-EEEEE-E-
T ss_pred CCeEEEECcCCEEEEE-e-CCeEEEecCCCCC---------------cCCC-CccCC--CCeEEEEc-ccC-EEEEE-E-
Confidence 3566766554333333 4 8899999765431 1110 00111 22677765 322 22332 3
Q ss_pred CceEEEEeccC-CeeEEEeecCccceEEEEEcCCCCeEEEEeCCCcEEEccCCCCCCCCCCCChhhhhhhhccCCCCcee
Q 021484 169 CGHLFIWKKKG-GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSR 247 (312)
Q Consensus 169 dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (312)
+|.|+.|-... ++.-.. ..-...|..++.-... .++. .||.|..|-....-...++.. ...............
T Consensus 158 ~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~--~~~~v~~i~~G~~h~ 231 (282)
T 3qhy_B 158 NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTE--ALSGVSAIASGEWYS 231 (282)
T ss_dssp TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGG--GGSSCCEEEECSSCE
T ss_pred CCEEEEecCCCCCCCCCc-eecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcc--cCCCceEEEcCCCEE
Confidence 79999997543 221100 0112456666653332 2333 599999997554322222111 110111112223344
Q ss_pred EEecCCceEEEEEecc
Q 021484 248 ITLTPDVIMHVLRLQR 263 (312)
Q Consensus 248 ~s~~~d~~i~i~~~~~ 263 (312)
+... |+.+..|-...
T Consensus 232 ~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 232 LALK-NGKVIAWGSSR 246 (282)
T ss_dssp EEEE-TTEEEEESTTC
T ss_pred EEEE-CCEEEEecCCC
Confidence 4445 89999886443
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.11 E-value=27 Score=29.81 Aligned_cols=29 Identities=3% Similarity=0.051 Sum_probs=21.6
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcc
Q 021484 33 LNAIVIDPRNPNYFAVGGSDEYARVYDIR 61 (312)
Q Consensus 33 v~~~~~~p~~~~~l~~~~~dg~i~iwd~~ 61 (312)
...|+|.|++...++++...|.|++++..
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 57899999983245555678999999754
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.12 E-value=26 Score=29.03 Aligned_cols=183 Identities=10% Similarity=0.185 Sum_probs=93.0
Q ss_pred eeecccCc--cceeeEEecccccCCcCCCCccceEEEEEc---CC---CCcEEEEE-eCCCeEEEEEccCCeecCCCCC-
Q 021484 2 WQFDLRSD--SATRLFYCSSFSENSKQPMNSIRLNAIVID---PR---NPNYFAVG-GSDEYARVYDIRKCHWYSPISS- 71 (312)
Q Consensus 2 ~~wd~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---p~---~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~- 71 (312)
-+|||.++ +..+.+...... .. ....+..+++. |. +..+++.+ +..+-|.++|+.+++.......
T Consensus 126 v~~DL~t~~~~li~~y~~p~~~--~~---~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~ 200 (381)
T 3q6k_A 126 VAYDLKQPNYPEVVRYYFPTRL--VE---KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT 200 (381)
T ss_dssp EEEESSSTTCCEEEEEECCGGG--CC---CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG
T ss_pred EEEECCCCCceeEEEEECCHHh--cc---cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC
Confidence 46888887 544444442111 11 24568899988 22 11344443 4578899999998874332210
Q ss_pred --CCCcccccccccccCC----CccEEEEEEccC----CCeEEEe--cCCcEEEEEc---CCCcCCCCCcCCcccccCCC
Q 021484 72 --DTPVDTFCPRHLIGKN----NIHITGLAYSNT----SELLISY--NDELVYLFEK---NMGLGPSPLSLSPEDLQKRE 136 (312)
Q Consensus 72 --~~~~~~~~~~~~~~~~----~~~i~~~~~~~~----~~~l~s~--~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~ 136 (312)
+.....+ .+ .+. ...+..|+++|+ ++.|.-. +...++-... +... + ..
T Consensus 201 ~~pd~~~~~---~i-~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~-----------~--~~ 263 (381)
T 3q6k_A 201 FKAERPTKF---DY-GGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG-----------G--KL 263 (381)
T ss_dssp GSCCSCEEE---EE-TTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT-----------C--CC
T ss_pred CccccCcce---EE-CCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc-----------h--hh
Confidence 0000000 00 111 357889999998 6655543 3334444432 1110 0 01
Q ss_pred CCceEecccCC-ceeeEEEEec-CCCCEEEEeccCceEEEEeccC-C---eeEEEeecCc--cceEEEEEcCCCCeEEEE
Q 021484 137 EPQVYSGHRNS-QTVKGVNFFG-PNDEYVMSGSDCGHLFIWKKKG-G---KLVRLMVGDR--HVVNQLEPHPHIPMFATC 208 (312)
Q Consensus 137 ~~~~~~~~~~~-~~v~~v~~~s-~~~~~l~~~~~dg~v~iwd~~~-~---~~~~~~~~~~--~~v~~~~~~p~~~~l~t~ 208 (312)
..+ ..+.+.. ..-..+++ + .+|.++++--....|..|+..+ . +....+.... ..+..+++.+++.+.++.
T Consensus 264 ~v~-~~G~kg~~s~~~~~~~-D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 264 NPE-LLGNRGKYNDAIALAY-DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCE-EEEECCTTCCEEEEEE-CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred ceE-EeeecCCCCCcceEEE-eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 222 2223321 11234455 5 5788888888899999999875 1 1222322111 245667766666554444
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.08 E-value=13 Score=33.74 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.9
Q ss_pred eeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEeec
Q 021484 150 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 188 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 188 (312)
|.++.+ +..++++-+.|.++++|++++++++....-
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 666554 478999999999999999999998877653
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.92 E-value=11 Score=35.75 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=30.6
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSP 68 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 68 (312)
..+.+++..++. .++++-+.|+++|+|++.+++++.+
T Consensus 236 ~~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 236 NTIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TCEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEee
Confidence 356777777766 6899999999999999999987654
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.70 E-value=15 Score=35.62 Aligned_cols=37 Identities=11% Similarity=-0.052 Sum_probs=31.0
Q ss_pred eeEEEEecCCCCEEEEeccCceEEEEeccCCeeEEEee
Q 021484 150 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 187 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 187 (312)
+.+++. .++..++++-+.|+++++|++.+++++.+..
T Consensus 240 ~vs~~~-~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEE-ETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeec-cCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 455555 6788899999999999999999999987754
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=66.84 E-value=32 Score=30.46 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=41.3
Q ss_pred eeEEEEecCCCCEEEEeccC------------ceEEEEeccCCeeEEEeecCc-cceEEEEEcCCCCeEEEE
Q 021484 150 VKGVNFFGPNDEYVMSGSDC------------GHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFATC 208 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~p~~~~l~t~ 208 (312)
.-.|+| ++.|.++++-..+ ..+.+.+..+++..+.+.++. ..++.++|+|+++.|...
T Consensus 478 PDNL~f-d~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEE-CTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEE-CCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 356788 8999866654322 246666777788776666554 578999999999987665
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=64.21 E-value=50 Score=25.85 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=71.3
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCCCCCCcccccccccccCCCccEEEEEEccCCCeEEEecCCcE
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 111 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i 111 (312)
.|..++..... .++. . ||.|+.|-....... ..+ ......|..++......+++ . |+.|
T Consensus 103 ~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gql-----g~~----------~~~~~~i~~i~~G~~~~~~l-~-~G~v 161 (282)
T 3qhy_B 103 GVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQT-----TVP----------AEAQSGVTALDGGVYTALAV-K-NGGV 161 (282)
T ss_dssp SEEEEEEETTE--EEEE-E-TTEEEEEECCTTSTT-----SCC----------GGGGSSEEEEEECSSEEEEE-E-TTEE
T ss_pred CeEEEECcCCE--EEEE-e-CCeEEEecCCCCCcC-----CCC----------ccCCCCeEEEEcccCEEEEE-E-CCEE
Confidence 46666665543 2333 3 788888876532210 000 11123466665543322332 3 7999
Q ss_pred EEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEecCCCCEEEEeccCceEEEEeccC-CeeEEEeecCc
Q 021484 112 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRLMVGDR 190 (312)
Q Consensus 112 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~ 190 (312)
+.|-..... ++- .-.... ..|..++. . ....++. .+|.|+.|-... ++.-.... ..
T Consensus 162 ~~wG~n~~g---------------qlg-~p~~~~--~~v~~i~~-G-~~hs~al--~~G~v~~wG~n~~gqlg~p~~-~~ 218 (282)
T 3qhy_B 162 IAWGDNYFG---------------QTT-VPAEAQ--SGVDDVAG-G-IFHSLAL--KDGKVIAWGDNRYKQTTVPTE-AL 218 (282)
T ss_dssp EEEECCTTS---------------TTS-CCGGGG--SSEEEEEE-C-SSEEEEE--ETTEEEEEECCTTSTTCCCGG-GG
T ss_pred EEecCCCCC---------------CCC-CceecC--CCeEEEEe-c-CCEEEEE--ECCeEEEEECCCCCCCCCCcc-cC
Confidence 999765431 110 000011 22777775 3 2333344 599999997543 22211111 12
Q ss_pred cceEEEEEcCCCCeEEEEeCCCcEEEccCCCC
Q 021484 191 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 222 (312)
Q Consensus 191 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 222 (312)
..|..++..... .++. . ||.|..|-....
T Consensus 219 ~~v~~i~~G~~h-~~al-~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 219 SGVSAIASGEWY-SLAL-K-NGKVIAWGSSRT 247 (282)
T ss_dssp SSCCEEEECSSC-EEEE-E-TTEEEEESTTCC
T ss_pred CCceEEEcCCCE-EEEE-E-CCEEEEecCCCC
Confidence 356666654332 2333 3 999999976543
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=60.90 E-value=61 Score=25.71 Aligned_cols=66 Identities=9% Similarity=-0.017 Sum_probs=39.0
Q ss_pred EecCCCCEEEEecc--------------CceEEEEeccCCeeEEEeecCccceEEEEEcCCCCeEEEEe----CCCcEEE
Q 021484 155 FFGPNDEYVMSGSD--------------CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG----IEKTVKL 216 (312)
Q Consensus 155 ~~s~~~~~l~~~~~--------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~t~~----~d~~i~i 216 (312)
+.++++.+|+-+.. ...|+..++..++.. .+... . ...|+|+++.|+-.. ....|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 33678888876654 246777787766533 33211 2 236778888877665 3345666
Q ss_pred ccCCCCCCC
Q 021484 217 WAPMPTDFP 225 (312)
Q Consensus 217 wd~~~~~~~ 225 (312)
-++.+....
T Consensus 134 ~~~dGs~~~ 142 (302)
T 3s25_A 134 IRIDGEEKK 142 (302)
T ss_dssp EETTSCCCE
T ss_pred EECCCCCeE
Confidence 666654443
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.28 E-value=63 Score=28.52 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=41.6
Q ss_pred eeEEEEecCCCCEEEEecc------------CceEEEEeccCCeeEEEeecC-ccceEEEEEcCCCCeEEEEe
Q 021484 150 VKGVNFFGPNDEYVMSGSD------------CGHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATCG 209 (312)
Q Consensus 150 v~~v~~~s~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~t~~ 209 (312)
...|.| +++|.+.++... ...|..++..+++....+... ...++.++|+|+++.|..+-
T Consensus 478 PDnL~f-d~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEE-CTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEE-CCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 567888 888987773321 226777788778876655543 24689999999999876653
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.12 E-value=36 Score=30.15 Aligned_cols=59 Identities=22% Similarity=0.414 Sum_probs=38.1
Q ss_pred cEEEEEEccCCCeEEEec-C------------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEEe
Q 021484 90 HITGLAYSNTSELLISYN-D------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF 156 (312)
Q Consensus 90 ~i~~~~~~~~~~~l~s~~-d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 156 (312)
..-.|+|+|.|.+++... + ..+.+.+..++ +..+.+.+... ..++.++|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g----------------~~~rf~~~P~g-aE~TG~~f- 538 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----------------EIRRFMVGPIG-CEVTGISF- 538 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC----------------CEEEEEECCTT-CEEEEEEE-
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCC----------------eEEEEEeCCCC-ccCcCeeE-
Confidence 456789999999666542 1 12444444444 45455555543 45999999
Q ss_pred cCCCCEEEEe
Q 021484 157 GPNDEYVMSG 166 (312)
Q Consensus 157 s~~~~~l~~~ 166 (312)
+|+++.|++.
T Consensus 539 spDg~tlfvn 548 (592)
T 3zwu_A 539 SPDQKTLFVG 548 (592)
T ss_dssp CTTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999888765
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.27 E-value=64 Score=28.46 Aligned_cols=61 Identities=20% Similarity=0.353 Sum_probs=38.7
Q ss_pred ccEEEEEEccCCCeEEEec--C-----------CcEEEEEcCCCcCCCCCcCCcccccCCCCCceEecccCCceeeEEEE
Q 021484 89 IHITGLAYSNTSELLISYN--D-----------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 155 (312)
Q Consensus 89 ~~i~~~~~~~~~~~l~s~~--d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 155 (312)
.....|.|.++|.+.++.. . ..++.++..++ +..+.+.+... ..++.++|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG----------------el~~fl~~P~~-aEpnGiaf 538 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----------------EIRRFMVGPIG-CEVTGISF 538 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC----------------CEEEEEECCTT-CEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC----------------eEEEEEeCCCC-ccccCCEE
Confidence 4567899999998766331 1 14555555544 44344433321 34899999
Q ss_pred ecCCCCEEEEec
Q 021484 156 FGPNDEYVMSGS 167 (312)
Q Consensus 156 ~s~~~~~l~~~~ 167 (312)
+|+++.|+++-
T Consensus 539 -SPD~ktLfV~v 549 (592)
T 4a9v_A 539 -SPDQKTLFVGI 549 (592)
T ss_dssp -CTTSSEEEEEE
T ss_pred -CCCCCEEEEEE
Confidence 99999887763
No 362
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=50.01 E-value=1.2e+02 Score=25.79 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=47.9
Q ss_pred eeecccCccceeeEEecccccCCcCCCCccceEEEEEcCC--------CCcEEEEEeCCCeEEEEEccCCeecCCCCCCC
Q 021484 2 WQFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR--------NPNYFAVGGSDEYARVYDIRKCHWYSPISSDT 73 (312)
Q Consensus 2 ~~wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 73 (312)
.||..+.........|..++-......|.....++.+.+. .+-+++... +|.|+.|.--... ..
T Consensus 60 ~VW~y~~~~~~~~~~c~~lpLp~sd~~~~~~lvsi~~~~~~~~~~s~~~pGlliVsp-tG~VryWesIs~~-------~~ 131 (450)
T 1xks_A 60 IIWKIALSPITKLSVCKELQLPPSDFHWSADLVALSYSSPSGEAHSTQAVAVMVATR-EGSIRYWPSLAGE-------DT 131 (450)
T ss_dssp EEEECCSSCCGGGCCEEEEECCCCSSCCCGGGEEEEECC-------CTTEEEEEECT-TCEEEEESCTTCT-------TC
T ss_pred EEEeecCCCCCCcccceeccCCccccccCCcEEEEEcCCCccccccCCCceEEEEcC-CccEEEccccCCC-------Cc
Confidence 5788876522222222221110111234554555554433 223555555 9999999854331 00
Q ss_pred CcccccccccccCCCccEEEEEEccCCCeEEEecCCcEEEEEcC
Q 021484 74 PVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKN 117 (312)
Q Consensus 74 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~d~~i~iwd~~ 117 (312)
-+. ..+.-...+.++.+.-....-++++.+-|.+....++
T Consensus 132 ~~e----i~~~L~~~E~vt~l~n~epaGfIlaTStgrl~~lsir 171 (450)
T 1xks_A 132 YTE----AFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPE 171 (450)
T ss_dssp CEE----EECC----CCEEEEEEETTTEEEEEETTCCEEEEEEC
T ss_pred eEE----EEecCCCCceEEEEeecCCceEEEEeccceEEEEEec
Confidence 111 1110111255666544333346666677777777776
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.78 E-value=14 Score=35.83 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=28.8
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCC
Q 021484 32 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSP 68 (312)
Q Consensus 32 ~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 68 (312)
.+.+++..++. .++++-+.|+++|+|++.+++++.+
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEe
Confidence 44556666666 7899999999999999999987654
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.23 E-value=29 Score=31.47 Aligned_cols=37 Identities=8% Similarity=0.179 Sum_probs=28.4
Q ss_pred cceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCeecCCCC
Q 021484 31 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPIS 70 (312)
Q Consensus 31 ~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 70 (312)
..|.++.+. . .++++-+.|.++|+|++.+++++....
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 346666554 3 699999999999999999998765433
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.35 E-value=1.9e+02 Score=23.90 Aligned_cols=173 Identities=14% Similarity=0.164 Sum_probs=88.8
Q ss_pred ccceEEEEEcCCCCcEEEE-EeC--------------CCeEEEEEccCC--eecCCCCCCCCcccccccccccCCCccEE
Q 021484 30 SIRLNAIVIDPRNPNYFAV-GGS--------------DEYARVYDIRKC--HWYSPISSDTPVDTFCPRHLIGKNNIHIT 92 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~-~~~--------------dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 92 (312)
--.|..+...+.+ ++-+. .+. --+|.+||+.+. +++.....+.. ... ....+.
T Consensus 86 lvsV~~v~iD~~~-rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~--------~~~-~~S~l~ 155 (381)
T 3q6k_A 86 LTSIYQPVIDDCR-RLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTR--------LVE-KPTYFG 155 (381)
T ss_dssp SSCEEEEEECTTC-EEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGG--------GCC-CGGGEE
T ss_pred eEEeeEEEEcCCC-cEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHH--------hcc-cCCccc
Confidence 3467788888876 44333 121 125788999988 76544332211 111 234577
Q ss_pred EEEEc---cC--C-C-eEEEe--cCCcEEEEEcCCCcCC--CCCcCCcccccCCCCCceE--ecc----cCCceeeEEEE
Q 021484 93 GLAYS---NT--S-E-LLISY--NDELVYLFEKNMGLGP--SPLSLSPEDLQKREEPQVY--SGH----RNSQTVKGVNF 155 (312)
Q Consensus 93 ~~~~~---~~--~-~-~l~s~--~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~----~~~~~v~~v~~ 155 (312)
.+++. |. + . ++..+ ....|.++|+.++..- .+..+.. .....+ .|. ... +..++.
T Consensus 156 di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p------d~~~~~~i~G~~~~~~~G--i~gIaL 227 (381)
T 3q6k_A 156 GFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA------ERPTKFDYGGKEYEFKAG--IFGITL 227 (381)
T ss_dssp EEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC------CSCEEEEETTEEEEECCC--EEEEEE
T ss_pred eEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc------ccCcceEECCEEeEeccC--ceEEEe
Confidence 78877 22 1 2 32223 4778999999876310 0000000 000011 111 122 778887
Q ss_pred ecCC----CCEEEEeccCc-eEEEEe---ccCC---eeEEEeecC--ccceEEEEEc-CCCCeEEEEeCCCcEEEccCCC
Q 021484 156 FGPN----DEYVMSGSDCG-HLFIWK---KKGG---KLVRLMVGD--RHVVNQLEPH-PHIPMFATCGIEKTVKLWAPMP 221 (312)
Q Consensus 156 ~s~~----~~~l~~~~~dg-~v~iwd---~~~~---~~~~~~~~~--~~~v~~~~~~-p~~~~l~t~~~d~~i~iwd~~~ 221 (312)
+|+ ++.|.-....+ .++--. ++.. ..+..+-.. ...-..++.. .+|.++++--....|..|+..+
T Consensus 228 -sp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 228 -GDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -CCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred -cCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 776 66666554433 333332 2221 122222111 1223345675 5677777777889999999876
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=34.52 E-value=1.1e+02 Score=26.37 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=37.2
Q ss_pred EEEEeccCceEEEEecc-CCe-------eEEEeec--CccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021484 162 YVMSGSDCGHLFIWKKK-GGK-------LVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKL 216 (312)
Q Consensus 162 ~l~~~~~dg~v~iwd~~-~~~-------~~~~~~~--~~~~v~~~~~~p~~~~l~t~~~d~~i~i 216 (312)
.++.|+.+|.|+-.-+. .+. .+..+.. ...+|..|.++++..+|..++..+.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 47788999987544332 211 2233332 3478999999999999999988877665
No 367
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=27.79 E-value=1.2e+02 Score=26.49 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=42.0
Q ss_pred eeEEEEecC--CCCEEEEeccCceEEEEeccCC----eeEEEeec--CccceE-EEEEcCCCCeEEEEeCCCcEEE
Q 021484 150 VKGVNFFGP--NDEYVMSGSDCGHLFIWKKKGG----KLVRLMVG--DRHVVN-QLEPHPHIPMFATCGIEKTVKL 216 (312)
Q Consensus 150 v~~v~~~s~--~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~--~~~~v~-~~~~~p~~~~l~t~~~d~~i~i 216 (312)
+++|+. .. +...++.|+.+|.|+-..+... ..+..+.. ...+|. .|.++++..+|..++..+.++|
T Consensus 402 lT~vav-~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVAS-YVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEE-EEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEe-eccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 555554 22 2345778899998876554322 12333322 245785 8999999999999887766665
No 368
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=27.56 E-value=3.2e+02 Score=24.12 Aligned_cols=24 Identities=4% Similarity=0.048 Sum_probs=15.9
Q ss_pred CCccEEEEEEccCCC--eEEEecCCc
Q 021484 87 NNIHITGLAYSNTSE--LLISYNDEL 110 (312)
Q Consensus 87 ~~~~i~~~~~~~~~~--~l~s~~d~~ 110 (312)
|-..+....|..||+ +++...+++
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt 202 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGT 202 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTC
T ss_pred ccCceeEEEcCCCCcceEEEEccCCc
Confidence 555677777888886 555555655
No 369
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=26.64 E-value=2.1e+02 Score=25.36 Aligned_cols=57 Identities=5% Similarity=-0.011 Sum_probs=38.0
Q ss_pred CEEEEeccCceEEEEeccC-C----e-eEEEee--cCccceEEEEEcCCCCeEEEEeCCCcEEEc
Q 021484 161 EYVMSGSDCGHLFIWKKKG-G----K-LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKLW 217 (312)
Q Consensus 161 ~~l~~~~~dg~v~iwd~~~-~----~-~~~~~~--~~~~~v~~~~~~p~~~~l~t~~~d~~i~iw 217 (312)
..++.|+.+|.|+-.-... + . .+..+. ....+|..+.++++...|..++.++.++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 3577889999876443322 2 1 122232 245688999999999998888877777663
No 370
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=25.54 E-value=87 Score=22.78 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=28.8
Q ss_pred ccceEEEEEcCCCCcEEEEEeCCCeEEEEEccCCe
Q 021484 30 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH 64 (312)
Q Consensus 30 ~~~v~~~~~~p~~~~~l~~~~~dg~i~iwd~~~~~ 64 (312)
+..+.++.|...+..-+++...++++.++|..-|+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 55677888887655778888899999999998776
No 371
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.22 E-value=2.9e+02 Score=24.90 Aligned_cols=55 Identities=13% Similarity=0.181 Sum_probs=36.4
Q ss_pred EEEEeccCceEEE-EeccCCe-------eEEEee--cCccceEEEEEcCCCCeEEEEeCCCcEEE
Q 021484 162 YVMSGSDCGHLFI-WKKKGGK-------LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKL 216 (312)
Q Consensus 162 ~l~~~~~dg~v~i-wd~~~~~-------~~~~~~--~~~~~v~~~~~~p~~~~l~t~~~d~~i~i 216 (312)
.++.|+.+|.|.- .-..... .+..+. ....+|..|.++++..+|..++..+.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 5778889998753 2221111 122222 24568999999999999999988887766
No 372
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=21.11 E-value=68 Score=23.32 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=23.8
Q ss_pred cceEEEEEcCCCCe-EEEEeCCCcEEEccCCCCCCC
Q 021484 191 HVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFP 225 (312)
Q Consensus 191 ~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~~ 225 (312)
..+.++.|...+.. +++.+.++++.+||++=++..
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 34455556554433 666667899999999988753
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.99 E-value=3.4e+02 Score=22.01 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=34.8
Q ss_pred eeeEEEEecC-CCCEEEEeccCceEEEEeccCCeeEEEeec-----C--------ccceEEEEEcCCC-CeEEEEeCCCc
Q 021484 149 TVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVG-----D--------RHVVNQLEPHPHI-PMFATCGIEKT 213 (312)
Q Consensus 149 ~v~~v~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-----~--------~~~v~~~~~~p~~-~~l~t~~~d~~ 213 (312)
.+.++.+ +| +...|+.+..++.|...+ ..++.-..+.. + ...+..+.++|.. ..+..+...+
T Consensus 178 ~i~~i~~-d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 178 KMHSILV-DPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp EEEEEEE-CTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred ceeEEEE-CCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 3778888 66 344555555555554443 22332222211 0 1247889999863 4555555444
Q ss_pred EEEcc
Q 021484 214 VKLWA 218 (312)
Q Consensus 214 i~iwd 218 (312)
|...+
T Consensus 255 l~~s~ 259 (394)
T 3b7f_A 255 IYRMD 259 (394)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 44443
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.49 E-value=3.4e+02 Score=21.94 Aligned_cols=67 Identities=15% Similarity=0.013 Sum_probs=35.3
Q ss_pred eeEEEEecC-C-CCEEEEeccCceEEEEeccCCeeEEEeec-------------------CccceEEEEEcCC-CCeEEE
Q 021484 150 VKGVNFFGP-N-DEYVMSGSDCGHLFIWKKKGGKLVRLMVG-------------------DRHVVNQLEPHPH-IPMFAT 207 (312)
Q Consensus 150 v~~v~~~s~-~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~p~-~~~l~t 207 (312)
|.++++ .| + ...|.+++..+.|...+- .++.-..+.. ....+..|.++|. ...+..
T Consensus 117 i~~l~~-~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 117 VFWLTP-GHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEE-CCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred eeEEEe-CCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 778887 65 2 556666666666655532 2332222211 1235788999884 334444
Q ss_pred EeCCCcEEEcc
Q 021484 208 CGIEKTVKLWA 218 (312)
Q Consensus 208 ~~~d~~i~iwd 218 (312)
+..++.|...+
T Consensus 195 g~~~ggl~~s~ 205 (394)
T 3b7f_A 195 GMSSGGVFEST 205 (394)
T ss_dssp EEETBEEEEES
T ss_pred EECCCCEEEEC
Confidence 44344444443
Done!