Query 021485
Match_columns 312
No_of_seqs 349 out of 2095
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:49:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021485hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.9 6.6E-27 2.2E-31 209.8 6.2 195 101-298 96-345 (367)
2 1f89_A 32.5 kDa protein YLR351 49.6 27 0.00094 29.7 5.9 56 184-239 25-96 (291)
3 3ivz_A Nitrilase; alpha-beta s 48.1 22 0.00076 29.8 4.9 56 183-238 15-84 (262)
4 3p8k_A Hydrolase, carbon-nitro 46.1 17 0.0006 31.0 4.0 57 183-239 34-100 (281)
5 2w1v_A Nitrilase-2, nitrilase 44.2 26 0.00089 29.6 4.8 55 184-238 17-81 (276)
6 3hkx_A Amidase; alpha-beta-BET 42.1 24 0.00083 30.1 4.3 56 183-238 34-100 (283)
7 1uf5_A N-carbamyl-D-amino acid 42.0 34 0.0012 29.3 5.2 57 183-239 19-93 (303)
8 2e11_A Hydrolase; dimethylarse 40.2 18 0.00063 30.4 3.1 55 184-239 18-81 (266)
9 1ems_A Nitfhit, NIT-fragIle hi 34.4 47 0.0016 30.2 5.2 57 184-240 28-95 (440)
10 2vhh_A CG3027-PA; hydrolase; 2 27.2 85 0.0029 28.3 5.5 53 187-239 97-165 (405)
11 2wqp_A Polysialic acid capsule 26.9 2.2E+02 0.0074 25.2 7.9 84 151-237 125-210 (349)
12 2lnd_A De novo designed protei 24.1 75 0.0026 21.6 3.3 25 191-215 40-64 (112)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.93 E-value=6.6e-27 Score=209.78 Aligned_cols=195 Identities=21% Similarity=0.223 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHhhhcceEEEEe-------eccC--CCCeEEEECCCCcchHHHHHHhcCC-------CeEEEEchhhhhc
Q 021485 101 IYGHVTGRLLMWILGNPVKIEG-------TEFA--DKRAIYISNHASPIDIFLLMWLTPT-------GTVGIAKKEIIWY 164 (312)
Q Consensus 101 ~~~~~~~~~~~~~~g~~v~v~g-------~e~~--~~~~iivaNH~s~~D~~~l~~~~~~-------~~~~v~k~~l~~~ 164 (312)
.+...+.+.++++.|.+ |.| .|++ ++++|+++||+|++|++++..++++ ++.+|+|+++.++
T Consensus 96 ~~~~~~ir~li~~~~s~--V~G~e~~~~~~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~ 173 (367)
T 1iuq_A 96 IFGQNYIRPLIDFGNSF--VGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLAD 173 (367)
T ss_dssp HHHHHHHGGGBCGGGCE--EECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHC
T ss_pred HHHHHHHHHHHhhcCCE--eecchhhhhHHhhccCCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcC
Confidence 34455555656666555 888 5555 3589999999999999999999875 7899999999988
Q ss_pred cHHHHHH--HHCCcEEE----e------cCCcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCC----CC--ccccchHH
Q 021485 165 PLFGQLY--VLAKHIRI----D------RSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQN----GR--LLPFKKGF 226 (312)
Q Consensus 165 p~~g~~~--~~~g~i~v----~------R~~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~----~~--l~~fk~G~ 226 (312)
|+...+. +.++|++. + |.+.+.+.+.+++.++.+.+.|.+++|||||||+++ +. ..+|++|.
T Consensus 174 Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs 253 (367)
T 1iuq_A 174 PLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASS 253 (367)
T ss_dssp TTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHH
T ss_pred ccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccchh
Confidence 8774431 33456664 4 555566777787766664344779999999999985 44 45699999
Q ss_pred H----HHHHhCCCC--EEEEEEeCCcccccCC---------CccccCeEEEEEEcCCccCCCCC------hhhHHHHHHH
Q 021485 227 V----HMALQSRLP--IVPIVLSGTHRAWRKG---------SLHIRPVPITVKYLPPISTSDWT------ADKLDDYIKM 285 (312)
Q Consensus 227 ~----~lA~~~~~p--VvPv~i~g~~~~~~~~---------~~~~~~~~i~v~~~~pi~~~~~~------~~~~~~~~~~ 285 (312)
+ ++|.++|+| |+|+++. ++..++.. .....++++.|.+++||++++++ +++.+++++.
T Consensus 254 ~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp~~ve~~~g~~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~ 332 (367)
T 1iuq_A 254 VDNMRRLIQHSDVPGHLFPLALL-CHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKA 332 (367)
T ss_dssp HHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCceEEEEEEE-eccccCCcccccccccccceeecccEEEEECCccchhhccccccchHHHHHHHHHH
Confidence 9 999999999 9999999 66666542 22346789999999999887543 3344567888
Q ss_pred HHHHHHhhCCCCC
Q 021485 286 VHDMYVKNLPEPQ 298 (312)
Q Consensus 286 v~~~i~~~l~~~~ 298 (312)
+++.|.+.+++..
T Consensus 333 v~~~I~~~y~~l~ 345 (367)
T 1iuq_A 333 LFDSVAMQYNVLK 345 (367)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888877775543
No 2
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=49.61 E-value=27 Score=29.70 Aligned_cols=56 Identities=14% Similarity=0.128 Sum_probs=35.9
Q ss_pred cHHHHHHHHHHHHHH--HcCCceEEEEeCCccCCCC---------Cc-----cccchHHHHHHHhCCCCEEE
Q 021485 184 PSAAIQSLKEAAHAI--VKDNLSLIIFPEGTRSQNG---------RL-----LPFKKGFVHMALQSRLPIVP 239 (312)
Q Consensus 184 ~~~~~~~l~~~~~~~--l~~g~~l~iFPEGt~~~~~---------~l-----~~fk~G~~~lA~~~~~pVvP 239 (312)
.....+.+.+.++++ .++|-.|++|||...+... .+ .++..-+..+|.+.++.|+.
T Consensus 25 ~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 96 (291)
T 1f89_A 25 KMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVG 96 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEEC
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEe
Confidence 344555666666666 5778889999997663211 01 23445566788999988763
No 3
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=48.13 E-value=22 Score=29.82 Aligned_cols=56 Identities=14% Similarity=0.173 Sum_probs=36.4
Q ss_pred CcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC-C----c---------cccchHHHHHHHhCCCCEE
Q 021485 183 NPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG-R----L---------LPFKKGFVHMALQSRLPIV 238 (312)
Q Consensus 183 ~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~-~----l---------~~fk~G~~~lA~~~~~pVv 238 (312)
+.+...+.+.+.+++..++|-.|++|||-..+... . . .+...-+..+|.+.++.|+
T Consensus 15 d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv 84 (262)
T 3ivz_A 15 EPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIV 84 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEE
Confidence 44556666777777766788899999996553211 1 0 1334456677888888765
No 4
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=46.06 E-value=17 Score=30.97 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=37.1
Q ss_pred CcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC--Cc--------cccchHHHHHHHhCCCCEEE
Q 021485 183 NPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG--RL--------LPFKKGFVHMALQSRLPIVP 239 (312)
Q Consensus 183 ~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~--~l--------~~fk~G~~~lA~~~~~pVvP 239 (312)
+.....+.+.+.++++.++|-.|++|||-..+... .+ .+...-+..+|.+.++.|+-
T Consensus 34 d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~ 100 (281)
T 3p8k_A 34 DSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVA 100 (281)
T ss_dssp CHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEE
Confidence 34556666777777766778899999997654211 10 12344566778888887653
No 5
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=44.23 E-value=26 Score=29.63 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC--Cc--------cccchHHHHHHHhCCCCEE
Q 021485 184 PSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG--RL--------LPFKKGFVHMALQSRLPIV 238 (312)
Q Consensus 184 ~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~--~l--------~~fk~G~~~lA~~~~~pVv 238 (312)
.....+.+.+.++++.++|-.|++|||...+... .+ .++..-+..+|.+.++.|+
T Consensus 17 ~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv 81 (276)
T 2w1v_A 17 KSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLI 81 (276)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEE
Confidence 3445566666666666778889999997653221 11 1234456677888888776
No 6
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=42.08 E-value=24 Score=30.08 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=36.4
Q ss_pred CcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC-C-c---------cccchHHHHHHHhCCCCEE
Q 021485 183 NPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG-R-L---------LPFKKGFVHMALQSRLPIV 238 (312)
Q Consensus 183 ~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~-~-l---------~~fk~G~~~lA~~~~~pVv 238 (312)
+.....+.+.+.++++.++|-.|++|||-..+... . + .++..-+..+|.+.++.|+
T Consensus 34 d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv 100 (283)
T 3hkx_A 34 DPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALV 100 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEE
Confidence 34556666777777767788899999997654221 0 1 1234455677888887765
No 7
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=42.03 E-value=34 Score=29.26 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=36.6
Q ss_pred CcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC--C----------------ccccchHHHHHHHhCCCCEEE
Q 021485 183 NPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG--R----------------LLPFKKGFVHMALQSRLPIVP 239 (312)
Q Consensus 183 ~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~--~----------------l~~fk~G~~~lA~~~~~pVvP 239 (312)
+.....+.+.+.++++.++|-.|++|||...+... . ..++..-+..+|.+.++.|+-
T Consensus 19 d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (303)
T 1uf5_A 19 TREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNL 93 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEE
Confidence 34455666666676666778889999997653210 0 123445567788888888753
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=40.16 E-value=18 Score=30.39 Aligned_cols=55 Identities=16% Similarity=0.102 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCC-Cc--------cccchHHHHHHHhCCCCEEE
Q 021485 184 PSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG-RL--------LPFKKGFVHMALQSRLPIVP 239 (312)
Q Consensus 184 ~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~-~l--------~~fk~G~~~lA~~~~~pVvP 239 (312)
.....+.+.+.++++ ++|-.|++|||...+... .. .++..-+..+|.+.++.|+-
T Consensus 18 ~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~ 81 (266)
T 2e11_A 18 PAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITG 81 (266)
T ss_dssp HHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEE
Confidence 344555566666655 667789999997654221 11 12344566778888888763
No 9
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=34.43 E-value=47 Score=30.22 Aligned_cols=57 Identities=9% Similarity=0.050 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCc-----------cccchHHHHHHHhCCCCEEEE
Q 021485 184 PSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRL-----------LPFKKGFVHMALQSRLPIVPI 240 (312)
Q Consensus 184 ~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~~l-----------~~fk~G~~~lA~~~~~pVvPv 240 (312)
.....+.+.+.++++.++|-.|++|||...+..... .+...-+..+|.+.++.|+-=
T Consensus 28 ~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G 95 (440)
T 1ems_A 28 LEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLG 95 (440)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEec
Confidence 344555666666666677888999999765322110 122334556788899887543
No 10
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=27.18 E-value=85 Score=28.33 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCceEEEEeCCccCCCC----------Cc------cccchHHHHHHHhCCCCEEE
Q 021485 187 AIQSLKEAAHAIVKDNLSLIIFPEGTRSQNG----------RL------LPFKKGFVHMALQSRLPIVP 239 (312)
Q Consensus 187 ~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~----------~l------~~fk~G~~~lA~~~~~pVvP 239 (312)
..+.+.+.++++.++|-.|++|||...+... .+ -++..-+..+|.+.++.|+-
T Consensus 97 nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~ 165 (405)
T 2vhh_A 97 IWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIH 165 (405)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEE
Confidence 3444555565556678889999996543210 00 11224466788899988763
No 11
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.92 E-value=2.2e+02 Score=25.21 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCeEEEEchhhhhccHHHHHHHHCCcEEEecCCcHHHHHHHHHHHHHHHcCCceEEEEeCCccCCCCCccccc-hHHHHH
Q 021485 151 TGTVGIAKKEIIWYPLFGQLYVLAKHIRIDRSNPSAAIQSLKEAAHAIVKDNLSLIIFPEGTRSQNGRLLPFK-KGFVHM 229 (312)
Q Consensus 151 ~~~~~v~k~~l~~~p~~g~~~~~~g~i~v~R~~~~~~~~~l~~~~~~~l~~g~~l~iFPEGt~~~~~~l~~fk-~G~~~l 229 (312)
-++.=|+..++.+.|++..+.+...-+.+.|+.. ..+.+..+++.+...|..+++. +++++.....-... ..+-.|
T Consensus 125 v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma--t~~Ei~~Ave~i~~~G~~iiLl-hc~s~Yp~~~~~~nL~ai~~l 201 (349)
T 2wqp_A 125 IPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN--SIESIKKSVEIIREAGVPYALL-HCTNIYPTPYEDVRLGGMNDL 201 (349)
T ss_dssp CSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC--CHHHHHHHHHHHHHHTCCEEEE-ECCCCSSCCGGGCCTHHHHHH
T ss_pred CCEEEECcccccCHHHHHHHHhcCCeEEEECCCC--CHHHHHHHHHHHHHcCCCEEEE-eccCCCCCChhhcCHHHHHHH
Confidence 3566789999999999999998888888998864 4556666666655566556555 67776543211121 233345
Q ss_pred HHhC-CCCE
Q 021485 230 ALQS-RLPI 237 (312)
Q Consensus 230 A~~~-~~pV 237 (312)
...+ ++||
T Consensus 202 k~~f~~lpV 210 (349)
T 2wqp_A 202 SEAFPDAII 210 (349)
T ss_dssp HHHCTTSEE
T ss_pred HHHCCCCCE
Confidence 5666 7775
No 12
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.08 E-value=75 Score=21.62 Aligned_cols=25 Identities=12% Similarity=0.464 Sum_probs=18.9
Q ss_pred HHHHHHHHHcCCceEEEEeCCccCC
Q 021485 191 LKEAAHAIVKDNLSLIIFPEGTRSQ 215 (312)
Q Consensus 191 l~~~~~~~l~~g~~l~iFPEGt~~~ 215 (312)
+++.++.+..+|.++++|-.|...+
T Consensus 40 irdiiksmkdngkplvvfvngasqn 64 (112)
T 2lnd_A 40 IRDIIKSMKDNGKPLVVFVNGASQN 64 (112)
T ss_dssp HHHHHHHHTTCCSCEEEEECSCCHH
T ss_pred HHHHHHHHHhcCCeEEEEecCcccc
Confidence 4555666678899999999987644
Done!