BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021487
(312 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 4 TLLVQVYMSDLTELFTWTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFR 63
TL Y + TW C CD T+ +II+ + + + I I FR
Sbjct: 22 TLSANSYCRTVIPGATWDCIHCDA-TEDLKIIKTWSTLIYDTNAMVARGDSEKTIYIVFR 80
Query: 64 GTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG 123
G+ SI+NWI DL + + ++YP +S VH GF +Y ++ ++ V Y
Sbjct: 81 GSS--SIRNWIADLTF--VPVSYPPVSGTKVHKGFLDSYGE--VQNELVATVLDQFKQYP 134
Query: 124 DLNIMVTGHSMGGAMAAFCGLDL---TVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPN 180
+ VTGHS+GGA A C LDL L N+ + T GQPR+GN AFA+Y
Sbjct: 135 SYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIP 194
Query: 181 TFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSC 240
R N DIVPHLPP F H E W+ E ++C E C
Sbjct: 195 YRRTVNERDIVPHLPPAAFGF-----LHAGSEYWITDNSP-----ETVQVCTSDLETSDC 244
Query: 241 SRSVTG-NSVSDHLVYFGVRMG 261
S S+ SV DHL YFG+ G
Sbjct: 245 SNSIVPFTSVLDHLSYFGINTG 266
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 4 TLLVQVYMSDLTELFTWTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFR 63
TL Y + TW C CD T+ +II+ + + + I I FR
Sbjct: 22 TLSANSYCRTVIPGATWDCIHCDA-TEDLKIIKTWSTLIYDTNAMVARGDSEKTIYIVFR 80
Query: 64 GTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG 123
G+ SI+NWI DL + + ++YP +S VH GF +Y ++ ++ V Y
Sbjct: 81 GSS--SIRNWIADLTF--VPVSYPPVSGTKVHKGFLDSYGE--VQNELVATVLDQFKQYP 134
Query: 124 DLNIMVTGHSMGGAMAAFCGLDL---TVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPN 180
+ VTGHS+GGA A C LDL L N+ + T GQPR+GN AFA+Y
Sbjct: 135 SYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIP 194
Query: 181 TFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSC 240
R N DIVPHLPP F H E W+ E ++C E C
Sbjct: 195 YRRTVNERDIVPHLPPAAFGF-----LHAGSEYWITDNSP-----ETVQVCTSDLETSDC 244
Query: 241 SRSVTG-NSVSDHLVYFGVRMG 261
S S+ SV DHL YFG+ G
Sbjct: 245 SNSIVPFTSVLDHLSYFGINTG 266
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 4 TLLVQVYMSDLTELFTWTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFR 63
TL Y + TW C CD T+ +II+ + + + I I FR
Sbjct: 22 TLSANSYCRTVIPGATWDCIHCDA-TEDLKIIKTWSTLIYDTNAMVARGDSEKTIYIVFR 80
Query: 64 GTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG 123
G+ SI+NWI DL + + ++YP +S VH GF +Y ++ ++ V Y
Sbjct: 81 GSS--SIRNWIADLTF--VPVSYPPVSGTKVHKGFLDSYGE--VQNELVATVLDQFKQYP 134
Query: 124 DLNIMVTGHSMGGAMAAFCGLDL---TVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPN 180
+ VTGHS+GGA A C LDL L N+ + T GQPR+GN AFA+Y
Sbjct: 135 SYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIP 194
Query: 181 TFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSC 240
R N DIVPHLPP F H E W+ E ++C E C
Sbjct: 195 YRRTVNERDIVPHLPPAAFGF-----LHAGSEYWITDNSP-----ETVQVCTSDLETSDC 244
Query: 241 SRSVTG-NSVSDHLVYFGVRMG 261
S S+ SV DHL YFG+ G
Sbjct: 245 SNSIVPFTSVLDHLSYFGINTG 266
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 4 TLLVQVYMSDLTELFTWTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFR 63
TL Y + TW C CD T+ +II+ + + + I I FR
Sbjct: 22 TLSANSYCRTVIPGATWDCIHCDA-TEDLKIIKTWSTLIYDTNAMVARGDSEKTIYIVFR 80
Query: 64 GTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYG 123
G+ SI+NWI DL + + ++YP +S VH GF +Y ++ ++ V Y
Sbjct: 81 GSS--SIRNWIADLTF--VPVSYPPVSGTKVHKGFLDSYGE--VQNELVATVLDQFKQYP 134
Query: 124 DLNIMVTGHSMGGAMAAFCGLDL---TVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPN 180
+ VTGHS+GGA C LDL L N+ + T GQPR+G+ AFA+Y
Sbjct: 135 SYKVAVTGHSLGGATVLLCALDLYQREEGLSSSNLFLYTQGQPRVGDPAFANYVVSTGIP 194
Query: 181 TFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSC 240
R N DIVPHLPP F H E W+ E ++C E C
Sbjct: 195 YRRTVNERDIVPHLPPAAFGF-----LHAGEEYWITDNSP-----ETVQVCTSDLETSDC 244
Query: 241 SRSVTG-NSVSDHLVYFGVRMG 261
S S+ SV DHL YFG+ G
Sbjct: 245 SNSIVPFTSVLDHLSYFGINTG 266
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 29 TKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPG 88
+ G I+ + + G++ IV++FRG+ +I+NW+ +L + Q D +
Sbjct: 46 SNGATIVASFTGSKTGIGGYVATDPTRKEIVVSFRGSI--NIRNWLTNLDFDQDDCSL-- 101
Query: 89 MSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTV 148
S VH GF +A++ I A AV +A+ ++ GHS+GGA+A G +L +
Sbjct: 102 TSGCGVHSGFQNAWNE--ISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRI 159
Query: 149 NLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHH 208
G + + T+G PR+GN A++ + FRVTN D VP LPP Y H
Sbjct: 160 --GGTPLDIYTYGSPRVGNTQLAAFVSNQAGGEFRVTNAKDPVPRLPPLIF-----GYRH 212
Query: 209 FPREVWLYHIGLGSLIYEVE--KICDGSGEDPSCSRSVTGNSVSDHLVYFGVRMGCN--- 263
E WL G + Y + K+C+G+ + C+ G + HL YF C+
Sbjct: 213 TSPEYWLSGSGGDKIDYTINDVKVCEGAA-NLQCNGGTLGLDIDAHLHYFQATDACSAGG 271
Query: 264 -EWTPCRIVMDPRVAE 278
W R ++E
Sbjct: 272 ISWRRYRSAKRESISE 287
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 45 LQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHN 104
+ GFL + IV++FRG++ SI+NWI +L + +IN S H GF S++ +
Sbjct: 63 VTGFLALDNTNKLIVLSFRGSR--SIENWIGNLNFDLKEINDI-CSGCRGHDGFTSSWRS 119
Query: 105 T--TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQ 162
T+R + +AV D+ ++ TGHS+GGA+A G DL N ++ V ++G
Sbjct: 120 VADTLRQKVEDAVREHPDY----RVVFTGHSLGGALATVAGADLRGNG--YDIDVFSYGA 173
Query: 163 PRIGNAAFASYYT-QLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLG 221
PR+GN AFA + T Q +R+T+ +DIVP LPP + Y H E W+ L
Sbjct: 174 PRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPR-----EFGYSHSSPEYWIKSGTLV 228
Query: 222 SL----IYEVEKI-CDGSGEDPSCSRSVTGNSVSDHLVYFGVRMGC 262
+ I ++E I G P+ + HL YFG+ C
Sbjct: 229 PVTRNDIVKIEGIDATGGNNQPNIP------DIPAHLWYFGLIGTC 268
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 36 ELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINY--------P 87
E + + Q + G++ I+ FRGT + QLD NY P
Sbjct: 39 EKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTN---------LQLDTNYTLTPFDTLP 89
Query: 88 GMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 147
+D VH G+Y + +++ + + V++ Y D + VTGHS+G +MAA L+
Sbjct: 90 QCNDCEVHGGYYIGW--ISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147
Query: 148 VNLGIQNVQVMTFGQPRIGNAAFASYYTQLV----PNT---FRVTNYHDIVPHLPPYYSY 200
NV++ TFG+PR GN AFASY P T FRVT+ +D +P+LPP
Sbjct: 148 ATY--DNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPP---- 201
Query: 201 FPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSD-HLVYFGVR 259
++ Y H E W Y + +G++ C + G V+D H YFG+
Sbjct: 202 -AEQGYAHGGVEYWSVD------PYSAQNTFVCTGDEVQCCEAQGGQGVNDAHTTYFGMT 254
Query: 260 MGCNEW 265
G W
Sbjct: 255 SGACTW 260
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 36 ELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINY--------P 87
E + + Q + G++ I+ FRGT + QLD NY P
Sbjct: 39 EKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTN---------LQLDTNYTLTPFDTLP 89
Query: 88 GMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 147
+D VH G+Y + +++ + + V++ Y D + VTGHS+G +MAA L+
Sbjct: 90 QCNDCEVHGGYYIGW--ISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147
Query: 148 VNLGIQNVQVMTFGQPRIGNAAFASYYTQLV----PNT---FRVTNYHDIVPHLPPYYSY 200
NV++ TFG+PR GN AFASY P T FRVT+ +D +P+LPP
Sbjct: 148 ATY--DNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPP---- 201
Query: 201 FPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSD-HLVYFGVR 259
++ Y H E W Y + +G++ C + G V+D H YFG+
Sbjct: 202 -AEQGYAHGGVEYWSVD------PYSAQNTFVCTGDEVQCCEAQGGQGVNDAHTTYFGMT 254
Query: 260 MGCNEW 265
G W
Sbjct: 255 SGACTW 260
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 45 LQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDAMVHHGFYSAYHN 104
+ GFL + IV++FRG++ SI+NWI +L + +IN S H GF S++ +
Sbjct: 63 VTGFLALDNTNKLIVLSFRGSR--SIENWIGNLNFDLKEINDI-CSGCRGHDGFTSSWRS 119
Query: 105 T--TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQ 162
T+R + +AV D+ ++ TGH++GGA+A G DL N ++ V ++G
Sbjct: 120 VADTLRQKVEDAVREHPDY----RVVFTGHALGGALATVAGADLRGNG--YDIDVFSYGA 173
Query: 163 PRIGNAAFASYYT-QLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLG 221
PR+GN AFA + T Q +R+T+ +DIVP LPP + Y H E W+ L
Sbjct: 174 PRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLPPR-----EFGYSHSSPEYWIKSGTLV 228
Query: 222 SL----IYEVEKI-CDGSGEDPSCSRSVTGNSVSDHLVYFGVRMGC 262
+ I ++E I G P+ + HL YFG+ C
Sbjct: 229 PVTRNDIVKIEGIDATGGNNQPNIP------DIPAHLWYFGLIGTC 268
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 36 ELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINY--------P 87
E + + Q + G++ I+ FRGT + QLD NY P
Sbjct: 39 EKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTN---------LQLDTNYTLTPFDTLP 89
Query: 88 GMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 147
+D VH G+Y + +++ + + V++ Y D + VTGHS+G +MAA L+
Sbjct: 90 QCNDCEVHGGYYIGW--ISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147
Query: 148 VNLGIQNVQVMTFGQPRIGNAAFASYYTQLV----PNT---FRVTNYHDIVPHLPPYYSY 200
NV++ TFG+PR GN AFASY P T FRVT+ +D +P+LPP
Sbjct: 148 ATY--DNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPP---- 201
Query: 201 FPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSD-HLVYFGVR 259
+ Y H E W Y + +G++ C + G V+D H YFG+
Sbjct: 202 -ADEGYAHGGVEYWSVD------PYSAQNTFVCTGDEVQCCEAQGGQGVNDAHTTYFGMT 254
Query: 260 MGCNEW 265
G W
Sbjct: 255 SGACTW 260
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 112/251 (44%), Gaps = 31/251 (12%)
Query: 20 WTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFW 79
W C +C +II + G++ + I + FRGT +S ++ I D+ +
Sbjct: 38 WDCVQCQKWVPDGKIITTFTSLLSDTNGYVLRSDKQKTIYLVFRGT--NSFRSAITDIVF 95
Query: 80 KQLDINYPGMSDAMVHHGFYSAYHNTTIRPAIIN----AVERAKDFYGDLNIMVTGHSMG 135
D Y + A VH GF S+Y ++N V+ + ++VTGHS+G
Sbjct: 96 NFSD--YKPVKGAKVHAGFLSSYEQ------VVNDYFPVVQEQLTAHPTYKVIVTGHSLG 147
Query: 136 GAMAAFCGLDL---TVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTF-RVTNYHDIV 191
GA A G+DL L +N+ + T G PR+GN FA YY + F R + DIV
Sbjct: 148 GAQALLAGMDLYQREPRLSPKNLSIFTVGGPRVGNPTFA-YYVESTGIPFQRTVHKRDIV 206
Query: 192 PHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTG-NSVS 250
PH+PP F H E W+ G ++ +IC E CS S+ S+
Sbjct: 207 PHVPPQSFGF-----LHPGVESWIKS-GTSNV-----QICTSEIETKDCSNSIVPFTSIL 255
Query: 251 DHLVYFGVRMG 261
DHL YF + G
Sbjct: 256 DHLSYFDINEG 266
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 36 ELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINY--------P 87
E + + Q + G++ I+ FRGT + QLD NY P
Sbjct: 39 EKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTN---------LQLDTNYTLTPFDTLP 89
Query: 88 GMSDAMVHHGFYSAYHNTTIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLT 147
+D VH G+Y + +++ + + V++ Y D + VTGH++G +MAA L+
Sbjct: 90 QCNDCEVHGGYYIGW--ISVQDQVESLVKQQASQYPDYALTVTGHALGASMAALTAAQLS 147
Query: 148 VNLGIQNVQVMTFGQPRIGNAAFASYYTQLV----PNT---FRVTNYHDIVPHLPPYYSY 200
NV++ TFG+PR GN AFASY P T FRVT+ +D +P+LPP
Sbjct: 148 ATY--DNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPP---- 201
Query: 201 FPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSVSD-HLVYFGVR 259
+ Y H E W Y + +G++ C + G V+D H YFG+
Sbjct: 202 -ADEGYAHGGVEYWSVD------PYSAQNTFVCTGDEVQCCEAQGGQGVNDAHTTYFGMT 254
Query: 260 MGCNEW 265
G W
Sbjct: 255 SGACTW 260
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 58/269 (21%)
Query: 28 LTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYP 87
L + F L+ DV G+L V I + RGT HS+++ I D+ Q +
Sbjct: 55 LIEEFHDPRLIFDVS----GYLAVDHASKQIYLVIRGT--HSLEDVITDIRIMQAPLTNF 108
Query: 88 GMS----------DAMVHHGFYSAYHNT--TIRPAIINAVERAKDFYGDLNIMVTGHSMG 135
++ D +VH+GF +Y+NT I P + + +E+ Y D I VTGHS+G
Sbjct: 109 DLAANISSTATCDDCLVHNGFIQSYNNTYNQIGPKLDSVIEQ----YPDYQIAVTGHSLG 164
Query: 136 GAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFAS-----YYTQLVPNT--------- 181
GA A G++L VN + V+T GQP +GNA FA+ ++ Q P+
Sbjct: 165 GAAALLFGINLKVNG--HDPLVVTLGQPIVGNAGFANWVDKLFFGQENPDVSKVSKDRKL 222
Query: 182 FRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVW----LYHIGLGSLIYEVEKICDGSGED 237
+R+T+ DIVP +P + Y H EV+ L H L +++ +C G +
Sbjct: 223 YRITHRGDIVPQVPFW------DGYQHCSGEVFIDWPLIHPPLSNVV-----MCQGQ-SN 270
Query: 238 PSCSRSVT----GNSVSDHLVYFGVRMGC 262
CS T N + +HL YF C
Sbjct: 271 KQCSAGNTLLQQVNVIGNHLQYFVTEGVC 299
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 47 GFLGVAKDLNAIVIAFRGTQEHSIQNWIEDLFWKQLDINYPGMSDA-MVHHGFYSAYHNT 105
G++ V +A+V+AFRG+ +S++NW+ D + + PG+ D + GF+S++
Sbjct: 65 GYIAVDHTNSAVVLAFRGS--YSVRNWVADATFVHTN---PGLCDGCLAELGFWSSWK-- 117
Query: 106 TIRPAIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRI 165
+R II ++ + ++V GHS+G A+A DL G + ++ + PR+
Sbjct: 118 LVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR-GKGYPSAKLYAYASPRV 176
Query: 166 GNAAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIY 225
GNAA A Y T N FR T+ +D VP LP Y H E W+ ++
Sbjct: 177 GNAALAKYITAQ-GNNFRFTHTNDPVPKLP-----LLSMGYVHVSPEYWITSPNNATVST 230
Query: 226 EVEKICDG 233
K+ DG
Sbjct: 231 SDIKVIDG 238
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 57 AIVIAFRGTQEHSIQNWIEDLFWKQLDIN------YPGMSDAMVHHGFYSAYHNTTIRPA 110
I +A GT S+ + + D + Q D N YP + M HGF AY++ +
Sbjct: 67 GIAVAIEGTNLFSLNSDLHDAKFWQEDPNERYIQYYPKGTKLM--HGFQQAYND--LMDD 122
Query: 111 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAF 170
I AV++ K + + V GHS+G AM C +D+ + + + FG PR+GN F
Sbjct: 123 IFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPRLGNPTF 182
Query: 171 ASYYTQLVPNTFR-VTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLY 216
AS+ Q + + F + N D VP +PP Y H VW+Y
Sbjct: 183 ASFVDQKIGDKFHSIINGRDWVPTVPPR-----ALGYQHPSDYVWIY 224
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 57 AIVIAFRGTQEHSIQNWIEDLFWKQLDIN------YPGMSDAMVHHGFYSAYHNTTIRPA 110
I +A GT S+ + + D + Q D N YP + M HGF AY++ +
Sbjct: 68 GIAVAIEGTNLFSLNSDLHDAKFWQEDPNERYIQYYPKGTKLM--HGFQQAYND--LMDD 123
Query: 111 IINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAF 170
I AV++ K + + V GHS+G AM C +D+ + + + FG PR+GN F
Sbjct: 124 IFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPRLGNPTF 183
Query: 171 ASYYTQLVPNTFR-VTNYHDIVPHLPPYYSYFPQKTYHHFPREVWLY 216
AS+ Q + + F + N D VP +PP Y H VW+Y
Sbjct: 184 ASFVDQKIGDKFHSIINGRDWVPTVPPR-----ALGYQHPSDYVWIY 225
>pdb|3G7N|A Chain A, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
pdb|3G7N|B Chain B, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
Length = 258
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 28/257 (10%)
Query: 16 ELFTWTCSRCDGLTKGFEIIELVVDVQHCLQGFLGVAKDLNAIVIAFRGTQEHSIQNWIE 75
+L + + C G I++ + D+ GF+G + + I + RG+ +I +++
Sbjct: 16 KLSSAAYTGCIGKAFDVTIVKRIYDLVTDTNGFVGYSTEKKTIAVIMRGST--TITDFVN 73
Query: 76 DLFWKQLDINYPGM---SDAMVHHGF---YSAYHNTTIRPAIINAVERAKDFYGDLNIMV 129
D+ + G+ SD + G +SA H+T II V+ Y D +
Sbjct: 74 DIDIALITPELSGVTFPSDVKIMRGVHRPWSAVHDT-----IITEVKALIAKYPDYTLEA 128
Query: 130 TGHSMGGAMAAFCGLDLTVNLGIQNVQVMTFGQPRIGNAAFASYYTQLVPNTFRVTNYHD 189
GHS+GGA+ + + L N +++ IGN A+A + T R N D
Sbjct: 129 VGHSLGGALTSIAHVALAQNFPDKSLVSNALNAFPIGNQAWADFGTAQAGTFNRGNNVLD 188
Query: 190 IVPHLPPYYSYFPQKTYHHFPREVWLYHIGLGSLIYEVEKICDGSGEDPSCSRSVTGNSV 249
VP++ Y S P + H+ E + G+ V+ C+G D SCS +V
Sbjct: 189 GVPNM--YSS--PLVNFKHYGTEYY----SSGTEASTVK--CEGQ-RDKSCSAGNGMYAV 237
Query: 250 S-DHLVYFGVRM---GC 262
+ H+ FGV M GC
Sbjct: 238 TPGHIASFGVVMLTAGC 254
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 32/166 (19%)
Query: 58 IVIAFRGTQEHSIQ--NWIEDLFW---KQLDINYPGMSDAMVHHGFYSAYHN-------- 104
IV+++RG S+Q W+ED + + I +H G+YS Y +
Sbjct: 149 IVVSWRG----SVQPLEWVEDFEFGLVNAIKIFGERNDQVQIHQGWYSIYXSQDERSPFT 204
Query: 105 -TTIRPAIINAVERAKDFYGDLNIMVT--GHSMGGAMAAFCGLDLTVNLGIQN------- 154
T R ++ V R + Y D + +T GHS+G A+A D+ N G
Sbjct: 205 KTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVAN-GYNRPKSRPDK 263
Query: 155 ---VQVMTFGQPRIGNAAFASYYTQLVP-NTFRVTNYHDIVPHLPP 196
V F PR+G++ F ++ L R N D++P PP
Sbjct: 264 SCPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDVIPIYPP 309
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 59 VIAFRGTQEHSIQNWIEDLFWKQLDINYP-----GMSDAMVHHGFYSAYHNTTIRP---- 109
VIA RGT SI +W+ + F +P G + Y ++P
Sbjct: 86 VIAIRGTNPVSISDWLFNDFMVSAMKKWPYASVEGRILKISESTSYGLKTLQKLKPKSHI 145
Query: 110 -----AIINAVERAKDFYGDLNIMVTGHSMGGAMAAFCGLDLTVNLGI---QNVQVMT-- 159
I+ + G I VTGHS GGA+++ L L G+ QN+ + T
Sbjct: 146 PGENKTILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDIQGVKLSQNIDISTIP 205
Query: 160 FGQPRIGNAAFASYYTQ-LVPNTFRVTNYHDIVPH 193
F P GNA FA Y+ L R+ N DIVP+
Sbjct: 206 FAGPTAGNADFADYFDDCLGDQCTRIANSLDIVPY 240
>pdb|2POK|A Chain A, Crystal Structure Of A M20 Family Metallo Peptidase From
Streptococcus Pneumoniae
pdb|2POK|B Chain B, Crystal Structure Of A M20 Family Metallo Peptidase From
Streptococcus Pneumoniae
Length = 481
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 80 KQLDINYPGMSDAMVHHGFYS-AYHNTTIRPAIINAVERAKDFYGD-LNIMVTGHSMGGA 137
KQLD N G +++ +Y + PAI+N +E AK FY ++++ T G
Sbjct: 374 KQLDKN--GFDKVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPM 431
Query: 138 MAAFCGLDL-TVNLGIQNVQVMTFGQPRIGNAAFASYYT--QLVPNTFR 183
F L++ V G+ N G N A YYT +LV R
Sbjct: 432 HTVFDALEVPMVAFGLGNANSRDHGGDE--NVRIADYYTHIELVEELIR 478
>pdb|4F4H|A Chain A, Crystal Structure Of A Glutamine Dependent Nad+ Synthetase
From Burkholderia Thailandensis
pdb|4F4H|B Chain B, Crystal Structure Of A Glutamine Dependent Nad+ Synthetase
From Burkholderia Thailandensis
Length = 565
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 277 AEYGKTDLKGNFILSRPPAASILKLRTDSDA 307
AEYG+ D+ IL+R P+A + + +TD D+
Sbjct: 456 AEYGQPDIVPERILTRAPSAELRENQTDQDS 486
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
Query: 109 PAIINAVERAKD-------FYGDLN--IMVTGHSMGGAMA 139
P ++A AKD YGDL IM+ GHSMGGA+A
Sbjct: 85 PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIA 124
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
Query: 109 PAIINAVERAKD-------FYGDLN--IMVTGHSMGGAMA 139
P ++A AKD YGDL IM+ GH+MGGA+A
Sbjct: 89 PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHAMGGAIA 128
>pdb|2E5B|A Chain A, Crystal Structure Of Human Nmprtase As Free-Form
pdb|2E5B|B Chain B, Crystal Structure Of Human Nmprtase As Free-Form
pdb|2E5C|A Chain A, Crystal Structure Of Human Nmprtase Complexed With
5'-Phosphoribosyl- 1'-Pyrophosphate
pdb|2E5C|B Chain B, Crystal Structure Of Human Nmprtase Complexed With
5'-Phosphoribosyl- 1'-Pyrophosphate
pdb|2E5D|A Chain A, Crystal Structure Of Human Nmprtase Complexed With
Nicotinamide
pdb|2E5D|B Chain B, Crystal Structure Of Human Nmprtase Complexed With
Nicotinamide
Length = 499
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 160 FGQPRIGN-AAFASYYTQLVPNTFRVTNYHDIVPHLPPYYSYF 201
G P+ N AA A + L ++++VT+Y P+ YSYF
Sbjct: 3 LGSPQFMNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYF 45
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,285,529
Number of Sequences: 62578
Number of extensions: 437254
Number of successful extensions: 935
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 26
length of query: 312
length of database: 14,973,337
effective HSP length: 99
effective length of query: 213
effective length of database: 8,778,115
effective search space: 1869738495
effective search space used: 1869738495
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)