BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021488
(311 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/249 (58%), Positives = 170/249 (68%), Gaps = 43/249 (17%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTP 57
MTFPD+GKFRGIAII F+TE A KRALALDGS+M G FLKIQPYK T+ AK+ SDF P
Sbjct: 213 MTFPDSGKFRGIAIIGFKTEAAAKRALALDGSDMGGFFLKIQPYKTTRTFQAKKVSDFAP 272
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
KIVEGYNRIY+GNLSWDITEEDL+K FS CKISS+R+GT+KETGEFRGY HV+FSD+LSL
Sbjct: 273 KIVEGYNRIYVGNLSWDITEEDLRKFFSGCKISSVRWGTDKETGEFRGYGHVEFSDNLSL 332
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
MALKLDQ++V GR +KISCAV P KG + + P+ T N+ADN
Sbjct: 333 LMALKLDQQIVCGRAIKISCAV-PMKGAKVHATAAPT--------------ATGNEADNG 377
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC---LKKTADQT 234
+LS VSGK+RRRTCYEC +KGH+S+AC L A
Sbjct: 378 ----------------------ELSTVSGKMRRRTCYECHQKGHVSTACPKVLASAAATD 415
Query: 235 MVTGKVSDN 243
VT +DN
Sbjct: 416 TVTANEADN 424
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 117/259 (45%), Gaps = 40/259 (15%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + TEED++ F C I+ + T ++G+FRG A + F + AL L
Sbjct: 182 KVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRALAL 241
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSN 183
D + G +KI P K +R+ + K V+D A V
Sbjct: 242 DGSDMGGFFLKIQ----PYK----TTRTFQAKK-----VSDFA----------PKIVEGY 278
Query: 184 VAANAGSGTSDVTEHIDLSAVSG----KIRRRTCYECGE---KGHLS-----SACLKKTA 231
G+ + D+TE SG +R T E GE GH+ S +
Sbjct: 279 NRIYVGNLSWDITEEDLRKFFSGCKISSVRWGTDKETGEFRGYGHVEFSDNLSLLMALKL 338
Query: 232 DQTMVTG---KVSDNAGSRTGNF-ADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKG 287
DQ +V G K+S + A A T N +DN LS VSGK+RRRTCYEC +KG
Sbjct: 339 DQQIVCGRAIKISCAVPMKGAKVHATAAPTATGNEADNGELSTVSGKMRRRTCYECHQKG 398
Query: 288 HLSSACPKKTADQTNSTTI 306
H+S+ACPK A + T+
Sbjct: 399 HVSTACPKVLASAAATDTV 417
>gi|326531612|dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 740
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 190/306 (62%), Gaps = 37/306 (12%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS-----DF 55
MTFPDTGKFRGIAI+ F+T+ A KRALALDG++M G LK+QPYKA + K S DF
Sbjct: 306 MTFPDTGKFRGIAILTFKTDAAAKRALALDGADMGGFLLKVQPYKANREKVKSNHEKEDF 365
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSL 115
PK++EGYNR Y+GNL+WD+TE+DL+K FSDCKISS+RFG +KETGEF+G+AHVDFSDS
Sbjct: 366 APKMIEGYNRTYVGNLAWDVTEDDLRKFFSDCKISSIRFGKDKETGEFKGFAHVDFSDST 425
Query: 116 SLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDAD 175
SL++ALKLDQ V++GRP +I CAVP K+ N K ++ + + + GT
Sbjct: 426 SLAIALKLDQNVIKGRPARIRCAVPKKE--NQKPDDNATSDSSKNSIRTCYECGTPGHL- 482
Query: 176 NSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTM 235
S A + S D T+ SA + +RRTCYECG GH+SSAC K A + +
Sbjct: 483 -SFACPNKKVEVISSENKDNTD----SAEALSKKRRTCYECGVPGHISSACPNKKASEVI 537
Query: 236 VTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPK 295
A N+ SA + +RRTCYECG GHLSSACP
Sbjct: 538 -------------------ADENKANID-----SATTSSKKRRTCYECGVPGHLSSACPN 573
Query: 296 KTADQT 301
K+A +
Sbjct: 574 KSAPEV 579
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 126/301 (41%), Gaps = 34/301 (11%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
+TG+F+G A ++F ++ AL LD + + G +I+ K + D
Sbjct: 409 ETGEFKGFAHVDFSDSTSLAIALKLDQNVIKGRPARIRCAVPKKENQKPD---------- 458
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSL-SLSMALKL 123
N + D ++ ++ + L F + E + D +DS +LS +
Sbjct: 459 ----DNATSDSSKNSIRTCYECGTPGHLSFACPNKKVEVISSENKDNTDSAEALSKKRRT 514
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRAT--SKVTDSAGLGTSNDADNSGAVT 181
E G P IS A P KK S + +A S T S T + G ++
Sbjct: 515 CYEC--GVPGHISSACPNKKA----SEVIADENKANIDSATTSSKKRRTCYECGVPGHLS 568
Query: 182 SNVA-ANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKV 240
S +A D + SA + +RRTCYECG GHLSSAC K+A + V
Sbjct: 569 SACPNKSAPEVIVDENKANTESATTASKKRRTCYECGVPGHLSSACPNKSAPEV-----V 623
Query: 241 SDNAGS-RTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTAD 299
S++ +A + D + L+ +RR CYECG GHLSSACP K A
Sbjct: 624 SNHTQPFDEPKYAPYMASEQNKIGDGSTLAPS----KRRKCYECGISGHLSSACPNKKAT 679
Query: 300 Q 300
+
Sbjct: 680 E 680
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 209 RRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGL 268
+RR CYECG GHLSSAC K A T ++ + + G G+ + + + N +
Sbjct: 656 KRRKCYECGISGHLSSACPNKKA--TEISPEEAKPVG---GSSMEPSAVSVENKPSDDTS 710
Query: 269 SAVSGKIRRRTCYECGEKGHLSSACP 294
S K +RRTCYECG GHLSS CP
Sbjct: 711 SVPPKKKKRRTCYECGIAGHLSSECP 736
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++Y+G + + +E+D++ F C I++L T +TG+FRG A + F +
Sbjct: 271 QSMKKVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPDTGKFRGIAILTFKTDAAAKR 330
Query: 120 ALKLD 124
AL LD
Sbjct: 331 ALALD 335
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 18/26 (69%)
Query: 278 RTCYECGEKGHLSSACPKKTADQTNS 303
RTCYECG GHLS ACP K + +S
Sbjct: 471 RTCYECGTPGHLSFACPNKKVEVISS 496
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 16/20 (80%)
Query: 207 KIRRRTCYECGEKGHLSSAC 226
K +RRTCYECG GHLSS C
Sbjct: 716 KKKRRTCYECGIAGHLSSEC 735
>gi|357129961|ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 191/321 (59%), Gaps = 54/321 (16%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS-----DF 55
MTFP++GKFRGIAI+ F+T+ A +RALALDG++M G FLK+QPYKA + K S DF
Sbjct: 224 MTFPESGKFRGIAILTFKTDAAAQRALALDGADMGGFFLKVQPYKANREKVKSNHEKEDF 283
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSL 115
PK++EGYNRIY+GNL+WDITE DL+K FSDCKISS+RFGT+KETG+F+G+AHVDFSD
Sbjct: 284 APKMIEGYNRIYVGNLAWDITEVDLRKFFSDCKISSIRFGTDKETGDFKGFAHVDFSDGT 343
Query: 116 SLSMALKLDQEVVRGRPVKISCAVP------PKKGINSKSRSLPSNKRATSKVTDSAG-- 167
SL++A+KLDQ V++GRPV+I CAVP P NS S NK T + G
Sbjct: 344 SLAVAMKLDQNVIKGRPVRIRCAVPRKESQKPNDNANSDSS---KNKIRTCFECGTPGHL 400
Query: 168 -LGTSNDADNSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
N + T +AA SA + +RRTCYECG GHLSSAC
Sbjct: 401 SFACPNKKPSEDMSTETMAATD-------------SAEAPSKKRRTCYECGVPGHLSSAC 447
Query: 227 LKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEK 286
+ A +VT + N S T S +RRTCYECG
Sbjct: 448 PNRKA-SVVVTDEKKANIDSTT-----------------------SASKKRRTCYECGIP 483
Query: 287 GHLSSACPKKTADQTNSTTIQ 307
GHLSSACP K A + S +Q
Sbjct: 484 GHLSSACPNKKAAEVVSNNMQ 504
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 205 SGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSD 264
S +RR CYECG GHLSSAC K D + + + N S T A SD
Sbjct: 528 SAPSKRRKCYECGISGHLSSACPNKK-DSQINSNEAKPNGDSNT---VPPAISDEKKASD 583
Query: 265 NAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTADQ 300
+ A K +RRTCYECG GHLSS CP K A Q
Sbjct: 584 DTN-PAPPKKKKRRTCYECGIAGHLSSECPNKAAAQ 618
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + +E+D++ F C I++L T E+G+FRG A + F + AL L
Sbjct: 193 KVYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDAAAQRALAL 252
Query: 124 D 124
D
Sbjct: 253 D 253
>gi|115461723|ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52353509|gb|AAU44075.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|222629967|gb|EEE62099.1| hypothetical protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 197/302 (65%), Gaps = 24/302 (7%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFP++GKFRGIAI+ F+T+ A +RALALDG++M G FLKIQPYK+ + K DF PK++
Sbjct: 206 MTFPESGKFRGIAILTFKTDAAAQRALALDGADMGGFFLKIQPYKSVREKE--DFAPKMI 263
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNR+Y+GNL+WDITE+DLKK FSDCKISS+RFGT+KETG+F+GY HVDFS+ S+++A
Sbjct: 264 EGYNRVYVGNLAWDITEDDLKKFFSDCKISSIRFGTDKETGDFKGYVHVDFSEGTSVAVA 323
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
+KLDQ+V++GRPV+I CAVP K + P + + +K+ GT G +
Sbjct: 324 MKLDQKVIKGRPVRIRCAVPKKDNQKLNGNANPDS--SNNKIRICYECGT------PGHI 375
Query: 181 TSNVA-ANAGSGTSDVTE-HIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTG 238
+S+ A SD + ++D S K +RRTCYECG GHLSSAC K A + +
Sbjct: 376 SSSCPNKKASEAISDEKKANVDSVTASSK-KRRTCYECGIPGHLSSACPNKKAGDAVSSD 434
Query: 239 KVSDNAGSRTGNFA--DNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKK 296
K D+ + DN +N SA S K RR CYECG GHLSSACP K
Sbjct: 435 KGPDDETKSAPSITPEDNKIGEESN-------SAPSKK--RRKCYECGIPGHLSSACPNK 485
Query: 297 TA 298
A
Sbjct: 486 VA 487
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 107/284 (37%), Gaps = 81/284 (28%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + +E+D++ F C I+S+ T E+G+FRG A + F + AL L
Sbjct: 175 KVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTDAAAQRALAL 234
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV--------------------- 162
D + G +KI P K + K P ++V
Sbjct: 235 DGADMGGFFLKIQ----PYKSVREKEDFAPKMIEGYNRVYVGNLAWDITEDDLKKFFSDC 290
Query: 163 -TDSAGLGTSNDADNSGAVTSNVAANAGSGTS-DVTEHIDLSAVSGKIRR---------- 210
S GT + +G V + GTS V +D + G+ R
Sbjct: 291 KISSIRFGTDKE---TGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPVRIRCAVPKKDN 347
Query: 211 ----------------RTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADN 254
R CYECG GH+SS+C K A + + K
Sbjct: 348 QKLNGNANPDSSNNKIRICYECGTPGHISSSCPNKKASEAISDEK--------------- 392
Query: 255 AGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTA 298
NV S + +RRTCYECG GHLSSACP K A
Sbjct: 393 ----KANVD-----SVTASSKKRRTCYECGIPGHLSSACPNKKA 427
>gi|125550587|gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
Length = 548
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 196/302 (64%), Gaps = 24/302 (7%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFP++GKFRGIAI+ F+T+ A +RALALDG++M G FLKIQPYK+ + K DF PK++
Sbjct: 206 MTFPESGKFRGIAILTFKTDAAAQRALALDGADMGGFFLKIQPYKSVREKE--DFAPKMI 263
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNR+Y+GNL+WDITE+DLKK FSDCKISS+RFGT+KETG+F+GY HVDFS+ S+++A
Sbjct: 264 EGYNRVYVGNLAWDITEDDLKKFFSDCKISSIRFGTDKETGDFKGYVHVDFSEGTSVAVA 323
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
+KLDQ+V++GRPV+I CAVP K + P + + +K+ GT G +
Sbjct: 324 MKLDQKVIKGRPVRIRCAVPKKDNQKLNGNANPDS--SNNKIRICYECGT------PGHI 375
Query: 181 TSNVA-ANAGSGTSDVTE-HIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTG 238
+S+ A SD + ++D S K +RRTCYECG GHLSSAC K A + +
Sbjct: 376 SSSCPNKKASEAISDEKKANVDSVTASSK-KRRTCYECGIPGHLSSACPNKKAGDAVSSD 434
Query: 239 KVSDNAGSRTGNFA--DNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKK 296
K D+ + DN +N SA S K RR CYECG HLSSACP K
Sbjct: 435 KGPDDETKSAPSITPEDNKIGEESN-------SAPSKK--RRKCYECGIPSHLSSACPNK 485
Query: 297 TA 298
A
Sbjct: 486 VA 487
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 107/284 (37%), Gaps = 81/284 (28%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + +E+D++ F C I+S+ T E+G+FRG A + F + AL L
Sbjct: 175 KVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTDAAAQRALAL 234
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV--------------------- 162
D + G +KI P K + K P ++V
Sbjct: 235 DGADMGGFFLKIQ----PYKSVREKEDFAPKMIEGYNRVYVGNLAWDITEDDLKKFFSDC 290
Query: 163 -TDSAGLGTSNDADNSGAVTSNVAANAGSGTS-DVTEHIDLSAVSGKIRR---------- 210
S GT + +G V + GTS V +D + G+ R
Sbjct: 291 KISSIRFGTDKE---TGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPVRIRCAVPKKDN 347
Query: 211 ----------------RTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADN 254
R CYECG GH+SS+C K A + + K
Sbjct: 348 QKLNGNANPDSSNNKIRICYECGTPGHISSSCPNKKASEAISDEK--------------- 392
Query: 255 AGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTA 298
NV S + +RRTCYECG GHLSSACP K A
Sbjct: 393 ----KANVD-----SVTASSKKRRTCYECGIPGHLSSACPNKKA 427
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 165/238 (69%), Gaps = 31/238 (13%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFPD+GKFRGIAII+F+TE A KRAL LDGS+M G +LKIQPYK TK + +F P IV
Sbjct: 227 MTFPDSGKFRGIAIISFKTEAAAKRALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGIV 286
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNLSWDITE+DLKK FSDCKISS+RFG +KETGEFRGY HVDFSD+ SL A
Sbjct: 287 EGYNRIYVGNLSWDITEDDLKKFFSDCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKA 346
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRAT---SKVTDSAGLGTSNDADNS 177
LKLDQ +V GRP+KISCAVP K G L N+ +K+ +A ++D N+
Sbjct: 347 LKLDQRIVCGRPIKISCAVPKKGG------KLQENQNQIVEEAKIQSTAMPMITSDEVNN 400
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKK-TADQT 234
G S SGKI+RRTCYECGEKGH+S+AC KK TAD T
Sbjct: 401 GVP---------------------SISSGKIKRRTCYECGEKGHISTACPKKLTADPT 437
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 23/256 (8%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+R+Y+G + + TE+D++ F C I+ + T ++G+FRG A + F + AL
Sbjct: 195 DRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKRALD 254
Query: 123 LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTS 182
LD + G +KI K +N + P +++ L D+ S
Sbjct: 255 LDGSDMGGFYLKIQPYKTTK--VNKEPNFAPGIVEGYNRIY-VGNLSWDITEDDLKKFFS 311
Query: 183 N-------VAANAGSGTSDVTEHIDLS-----AVSGKIRRRTCYECGEKGHLSSACLKKT 230
+ + +G H+D S + K+ +R CG +S A KK
Sbjct: 312 DCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIV--CGRPIKISCAVPKKG 369
Query: 231 ADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLS 290
++ + A ++ + T++ +N S SGKI+RRTCYECGEKGH+S
Sbjct: 370 GKLQENQNQIVEEAKIQSTAMP----MITSDEVNNGVPSISSGKIKRRTCYECGEKGHIS 425
Query: 291 SACPKK-TADQTNSTT 305
+ACPKK TAD T+S T
Sbjct: 426 TACPKKLTADPTDSNT 441
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 164/231 (70%), Gaps = 38/231 (16%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M FP++GKFRGIAII+F+TE A KRALALDG++M GLFLKIQPYK T+A ++SDF P++V
Sbjct: 214 MMFPESGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMV 273
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNL WDITE++++K FS C +SS+RFG +KET EFRGYAHVDFSD+ SL+MA
Sbjct: 274 EGYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMA 333
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
LKLDQE+V GRP KI CAV PKKG S PS+++ A+N G +
Sbjct: 334 LKLDQEIVCGRPAKIRCAV-PKKGAKDYSTPAPSSEK----------------AENDGGL 376
Query: 181 TSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTA 231
TS SGK++RRTCYECGE+GH+SSAC KK A
Sbjct: 377 TSG---------------------SGKMKRRTCYECGERGHISSACPKKQA 406
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N++Y+G + + TE+D++ F C I+ + E+G+FRG A + F + AL
Sbjct: 182 NKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFKTEAAAKRALA 241
Query: 123 LDQEVVRGRPVKISCAVPPKKGINSKSRSL-PSNKRATSKV-TDSAGLGTSNDADNSGAV 180
LD + G +KI P K +KS P +++ + + D
Sbjct: 242 LDGADMGGLFLKIQ---PYKTTRANKSSDFAPEMVEGYNRIYVGNLPWDITEDEVRKFFS 298
Query: 181 TSNVAANAGSGTSDVTE-----HIDLS---AVSGKIRRRTCYECGEKGHLSSACLKKTAD 232
NV++ + E H+D S +++ ++ CG + A KK A
Sbjct: 299 RCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKIRCAVPKKGAK 358
Query: 233 QTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSA 292
S+ A ++ GL++ SGK++RRTCYECGE+GH+SSA
Sbjct: 359 DYSTPAPSSEKA------------------ENDGGLTSGSGKMKRRTCYECGERGHISSA 400
Query: 293 CPKKTA-DQTNSTT 305
CPKK A D NS++
Sbjct: 401 CPKKQAPDLKNSSS 414
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 162/230 (70%), Gaps = 25/230 (10%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFP+TGKFRGIAII F+TE A KRALALDG++M GLFLKIQPYKAT+A + SDF P+I+
Sbjct: 198 MTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQPYKATRANKASDFAPEIL 257
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNLSWDITEE+L+K F+ C+I+SLRFG +KETGEFRGYAHVDFSDS SL A
Sbjct: 258 EGYNRIYVGNLSWDITEEELRKFFNGCEITSLRFGMDKETGEFRGYAHVDFSDSQSLKTA 317
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
L LDQ V+ GRPV+ISCAVP KK T T S G + D +S
Sbjct: 318 LALDQNVLFGRPVRISCAVPLKK--------------KTGTHTSSTVNGANGDKPSS--- 360
Query: 181 TSNVAANAGSGTSDVTEHIDLSAV-SGKIRRRTCYECGEKGHLSSACLKK 229
GS D + S+ SGK+RRRTCYECGEKGH +AC KK
Sbjct: 361 -------TGSDRIDGADGDKPSSTGSGKMRRRTCYECGEKGHTFAACPKK 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 272 SGKIRRRTCYECGEKGHLSSACPKK 296
SGK+RRRTCYECGEKGH +ACPKK
Sbjct: 379 SGKMRRRTCYECGEKGHTFAACPKK 403
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+ Y+G + + TE+D++ F C I+ + T ETG+FRG A + F + AL L
Sbjct: 167 KAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALAL 226
Query: 124 DQEVVRGRPVKI 135
D + G +KI
Sbjct: 227 DGADMGGLFLKI 238
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 162/229 (70%), Gaps = 23/229 (10%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFP+TGKFRGIAII F+TE A KRALALDG++M GLFLKIQPYKAT+A + SDF P+I+
Sbjct: 181 MTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQPYKATRANKASDFAPEIL 240
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNLSWDITEE+L+K F++ +I+SLRFG +KETGEFRGYAHVDF DS SL A
Sbjct: 241 EGYNRIYVGNLSWDITEEELRKFFNNSEITSLRFGMDKETGEFRGYAHVDFGDSQSLKKA 300
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
L LDQ V+ GRPV+ISCAVP KK + A+S V ++ G D S +
Sbjct: 301 LALDQNVLFGRPVRISCAVPLKKKTGT---------HASSTVNEANG-------DKSSST 344
Query: 181 TSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKK 229
S+ A S S SGK+RRRTCYECGEKGH +AC K
Sbjct: 345 GSDKINGADGDKSS-------STGSGKMRRRTCYECGEKGHTFAACPTK 386
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 272 SGKIRRRTCYECGEKGHLSSACPKK 296
SGK+RRRTCYECGEKGH +ACP K
Sbjct: 362 SGKMRRRTCYECGEKGHTFAACPTK 386
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+IY+G + + TE+D++ F C I+ + T ETG+FRG A + F + AL L
Sbjct: 150 KIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALAL 209
Query: 124 DQEVVRGRPVKI 135
D + G +KI
Sbjct: 210 DGADMGGLFLKI 221
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 198/358 (55%), Gaps = 74/358 (20%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M FP++GKFRGIAI+ F+T+ A +RALA+DG++M G +LKIQPYK + K DF PK++
Sbjct: 215 MNFPESGKFRGIAILTFKTDAAAQRALAMDGADMGGFYLKIQPYKHNREKE--DFAPKLI 272
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNL WDIT++DLKK FS+CKISS+RFGT+KETG F+GYAHVDFSDS SL+ A
Sbjct: 273 EGYNRIYVGNLPWDITDDDLKKFFSECKISSIRFGTDKETGGFKGYAHVDFSDSASLAAA 332
Query: 121 LKLDQEVVRGRPVKISCAVPPKKG-----------INSKSR-------------SLPSNK 156
LKLDQ+V++ RPV+I CAVP K + SK+R S P+ K
Sbjct: 333 LKLDQKVIKERPVRIRCAVPKKDNQKVNDNGNSDHLKSKTRTCYECGTPGHFSSSCPNKK 392
Query: 157 RATSKVTDSAGL------GTSNDADNS-------GAVTSNVAANAGSGTSDVTEHIDLSA 203
+ ++ G N D+ G +A SD E S
Sbjct: 393 DSEARKCYECGTPGHLSSACPNKKDSEVRKCYECGTAGHLSSACPNKKDSDEKEDNSNST 452
Query: 204 VSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVS 263
++ +RRTCYECG GHLSS C K + + K TNV
Sbjct: 453 IAASKKRRTCYECGIPGHLSSNCPNKKDPEFISDEK-------------------NTNVD 493
Query: 264 DNAGLSAVSGKIRRRTCYECGEKGHLSSACPKK-----------TADQTNSTTIQVEQ 310
SA + +RRTCYECG GHLSSACP K AD +TTI+ E+
Sbjct: 494 -----SAPASSKKRRTCYECGTPGHLSSACPNKRTSESVLNNREPADAKPATTIKPEE 546
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 52/95 (54%), Gaps = 15/95 (15%)
Query: 209 RRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGL 268
+RR CYECG GHLSSAC K A + + + + GN + NA L VSD
Sbjct: 560 KRRKCYECGISGHLSSACPSKKAAEPVCNEE-------KPGNHS-NAVLPV--VSDEKKA 609
Query: 269 S-----AVSGKIRRRTCYECGEKGHLSSACPKKTA 298
S A + K +RRTCYECG GHLSS CP K A
Sbjct: 610 SEDAKSAPAKKKKRRTCYECGIAGHLSSECPNKAA 644
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + +E+D++ F C I+ + E+G+FRG A + F + AL +
Sbjct: 184 KVYVGGIPYYSSEDDIRSFFEACGSITMIDCMNFPESGKFRGIAILTFKTDAAAQRALAM 243
Query: 124 D 124
D
Sbjct: 244 D 244
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 191/328 (58%), Gaps = 43/328 (13%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
MTFP++GKFRGIAI+ F+T+ A +RALA+DG++M G +LKIQPYK + K DF PK++
Sbjct: 233 MTFPESGKFRGIAILTFKTDAAAQRALAMDGADMGGFYLKIQPYKHNREKE--DFAPKLI 290
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIY+GNL WDIT++DLKK FS+C ISS+RFGT+KETGEF+GYAHVDFSD SL++A
Sbjct: 291 EGYNRIYVGNLPWDITDDDLKKFFSECNISSIRFGTDKETGEFKGYAHVDFSDGTSLAVA 350
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGI----NSKSRSLPSNKRATSKVTDSAGLGTS-NDAD 175
LKLDQ+V++GRPV+I CAV K N S +L S R + +S +
Sbjct: 351 LKLDQKVIKGRPVRIRCAVAKKDNQKVNDNGNSDNLKSKNRTCYECGTPGHFSSSCPNKK 410
Query: 176 NSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACL-KKTAD-- 232
+S G +S D A R CYECG GHLSSAC KK +D
Sbjct: 411 DSDVRKCYECGTPGHLSSACPNKKDSEA-------RKCYECGTPGHLSSACPNKKDSDVI 463
Query: 233 ------------------QTMVTGKVSDNAGSRTGNFADNAGLG---TTNVSDNAGLSAV 271
+T + + S N D+ + TNV SA
Sbjct: 464 SDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFISDEKKTNVD-----SAT 518
Query: 272 SGKIRRRTCYECGEKGHLSSACPKKTAD 299
+ +RRTCYECG GHLSSACP K +D
Sbjct: 519 APSKKRRTCYECGTPGHLSSACPNKRSD 546
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 202 SAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNAGLGTTN 261
SA + +RRTCYECG GHLSSAC K +D + D+A T ++ +G
Sbjct: 516 SATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEETKVG--- 572
Query: 262 VSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTA 298
+ SA S K RR CYECG GHLSSACP K A
Sbjct: 573 ---DESNSAASKK--RRKCYECGISGHLSSACPNKKA 604
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 142 KKGINSKSRSLPSNKRATSKVTDSAG-LGTSNDADNSGAVTSNV-----AANAGSGTSDV 195
+K N S + PS KR T + G L ++ S +V +N A A + S+
Sbjct: 509 EKKTNVDSATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEE 568
Query: 196 TEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADNA 255
T+ D S + +RR CYECG GHLSSAC K A + + + DN + + +
Sbjct: 569 TKVGDESNSAASKKRRKCYECGISGHLSSACPNKKAAEPVYNEEKPDNQSNTVLSVVADE 628
Query: 256 GLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTA 298
+ SA + K +RRTCYECG GHLSS CP K A
Sbjct: 629 KKANEDTK-----SAPAKKKKRRTCYECGIAGHLSSECPNKAA 666
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 99/282 (35%), Gaps = 76/282 (26%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + +E+D++ F C I+ + T E+G+FRG A + F + AL +
Sbjct: 202 KVYVGGIPYYSSEDDIRSFFEACGTITVIDCMTFPESGKFRGIAILTFKTDAAAQRALAM 261
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSK---------VTD---------- 164
D + G +KI P K K P ++ +TD
Sbjct: 262 DGADMGGFYLKIQ----PYKHNREKEDFAPKLIEGYNRIYVGNLPWDITDDDLKKFFSEC 317
Query: 165 ---SAGLGTSNDADNSGAVTSNVAANAGSGTS-DVTEHIDLSAVSGKIRRRTC------- 213
S GT + +G + GTS V +D + G+ R C
Sbjct: 318 NISSIRFGTDKE---TGEFKGYAHVDFSDGTSLAVALKLDQKVIKGRPVRIRCAVAKKDN 374
Query: 214 -------------------YECGEKGHLSSACLKKTADQTMVTGKVSDNAGSRTGNFADN 254
YECG GH SS+C K K SD +
Sbjct: 375 QKVNDNGNSDNLKSKNRTCYECGTPGHFSSSCPNK---------KDSDVRKCYECGTPGH 425
Query: 255 AGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKK 296
N D+ R CYECG GHLSSACP K
Sbjct: 426 LSSACPNKKDSEA----------RKCYECGTPGHLSSACPNK 457
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 202/330 (61%), Gaps = 38/330 (11%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT------KAKRTSDFTP 57
P+ G F GIA I F TE KRALA D + M FL IQ Y T + K +S F P
Sbjct: 198 PEDGAFSGIAFITFETEDGAKRALAFDRAAMGDRFLTIQQYVKTTTPFVPRRKTSSGFAP 257
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++V+GYNR+YIGNL+WD TE D++KLFSDC I+S+R G NKETGEF+GYAHVDF DS+S+
Sbjct: 258 EMVDGYNRVYIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSV 317
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
++ALKLDQ+V+ GRPVK+ CA+ + + T T++ G S + + +
Sbjct: 318 AIALKLDQQVICGRPVKVCCALKDRPATDH-----------TPGETNNVG---SYNMEET 363
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKK--TADQTM 235
A + A AG+ + + + SGKI+RR C+ECGEKGHLS+AC KK AD
Sbjct: 364 YAAADPIPALAGADEVNDGNYFTTTVSSGKIKRRNCFECGEKGHLSNACPKKHQNADDQA 423
Query: 236 VT--GKVSDNAGSRTGNFADNAGLG----------TTNVSDNAGL-SAVS--GKIRRRTC 280
+ G+ + +AG ++A +G TN +++ GL SAVS GK++RR C
Sbjct: 424 NSKLGQETVDAGPAMQSYALQKNIGDSYYMNETYAATNETNDGGLASAVSTTGKVKRRNC 483
Query: 281 YECGEKGHLSSACPKKTADQTNSTTIQVEQ 310
YECGEKGHLS+ACPKK + T T Q+E
Sbjct: 484 YECGEKGHLSTACPKKLQN-TAHTNSQLEH 512
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 77/129 (59%), Gaps = 30/129 (23%)
Query: 202 SAVS--GKIRRRTCYECGEKGHLSSACLKKTAD----------QTMVTGKV---SDNAGS 246
SAVS GK++RR CYECGEKGHLS+AC KK + QT+ G V S + +
Sbjct: 470 SAVSTTGKVKRRNCYECGEKGHLSTACPKKLQNTAHTNSQLEHQTVEAGPVQVTSYSLQT 529
Query: 247 RTGNFADNAG-------------LGTTNVSDNAGL-SAVS-GKIRRRTCYECGEKGHLSS 291
+T + +N G + TN +++A L SAVS GKI++R CYECGEKGHLSS
Sbjct: 530 KTRDTENNGGSFMDETYATVPISVDVTNGANDASLTSAVSTGKIKKRNCYECGEKGHLSS 589
Query: 292 ACPKKTADQ 300
ACPKK Q
Sbjct: 590 ACPKKLQKQ 598
>gi|51969240|dbj|BAD43312.1| putative protein [Arabidopsis thaliana]
Length = 597
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 195/326 (59%), Gaps = 39/326 (11%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT------KAKRTSDFTP 57
P+ G F GIA I F TE KRALA D + M +L IQ Y T + K +S F P
Sbjct: 196 PEDGAFSGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAP 255
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++V+GYNR+YIGNL+WD TE D++KLFSDC I+S+R G NKETGEF+GYAHVDF DS+S+
Sbjct: 256 EMVDGYNRVYIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSV 315
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
++ALKLDQ+V+ GRPVKI CA+ + + T T++AG S + +++
Sbjct: 316 AIALKLDQQVICGRPVKICCALKDRPATDH-----------TPGETNNAG---SYNMEDT 361
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC---LKKTADQT 234
A V A AG D + + S K++RR CYECGEKGHLS+AC L+K DQ
Sbjct: 362 YAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGEKGHLSTACPIKLQKADDQV 421
Query: 235 -------MVTGKVSDNAGSRTGNFAD----NAGLGTTNVSDNAGLSAV---SGKIRRRTC 280
V G+ + + N D N +TN + N G SA +GK++RR C
Sbjct: 422 NSKLGQETVDGRPAMQSYGLPKNSGDSYYMNETYASTNETYNGGYSASAVGTGKVKRRNC 481
Query: 281 YECGEKGHLSSACPKKTAD--QTNST 304
YECGEKGHLS+ACP K + TNST
Sbjct: 482 YECGEKGHLSTACPIKLQNTSHTNST 507
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 147/339 (43%), Gaps = 82/339 (24%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG-- 62
+TG+F+G A ++F+ +V AL LD + G +KI A K + +D TP
Sbjct: 297 ETGEFKGYAHVDFKDSVSVAIALKLDQQVICGRPVKI--CCALKDRPATDHTPGETNNAG 354
Query: 63 -YNR--IY-----IGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDS 114
YN Y + L+ +D + S ++ E GE H+ +
Sbjct: 355 SYNMEDTYAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGE---KGHLSTACP 411
Query: 115 LSLSMA-----LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLG 169
+ L A KL QE V GRP S +P G DS +
Sbjct: 412 IKLQKADDQVNSKLGQETVDGRPAMQSYGLPKNSG-------------------DSYYM- 451
Query: 170 TSNDADNSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC--- 226
N ++N N G S V +GK++RR CYECGEKGHLS+AC
Sbjct: 452 ------NETYASTNETYNGGYSASAVG--------TGKVKRRNCYECGEKGHLSTACPIK 497
Query: 227 LKKTAD-------QTMVTG----------KVSDNAGSRTGNFADNA------GLGTTNVS 263
L+ T+ QT+ G K + + + G+F D + + TN +
Sbjct: 498 LQNTSHTNSTLDHQTVEAGPTQVTSYSLQKKTRDTENNGGSFMDESYATVPISIDVTNGA 557
Query: 264 DNAGL-SAVS-GKIRRRTCYECGEKGHLSSACPKKTADQ 300
++A L SAVS GKI++R CYECGEKGHLSSACP K Q
Sbjct: 558 NDASLTSAVSTGKIKKRNCYECGEKGHLSSACPNKLQKQ 596
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N++Y+G + + TE++++ F C I + E G F G A + F AL
Sbjct: 161 NKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKRALA 220
Query: 123 LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS------------KVTDSAGLGT 170
D+ + R + I ++ + + + S+P K ++ + + A T
Sbjct: 221 FDRAAMGDRYLTI------QQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVYIGNLAWDTT 274
Query: 171 SNDADN--SGAVTSNV--AANAGSGTSDVTEHIDLS-----AVSGKIRRRTCYECGEKGH 221
D S V ++V N +G H+D A++ K+ ++ CG
Sbjct: 275 ERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQVI--CGRPVK 332
Query: 222 LSSACLKKTADQTMVTGKVSDNAGSRTGNFADN--------AGLGTTNVSDNAGLSAV-- 271
+ C K T T ++NAGS N D A G + V D +
Sbjct: 333 I--CCALKDRPATDHTPGETNNAGSY--NMEDTYAAADPVPALAGRSEVDDGNYFATTVS 388
Query: 272 SGKIRRRTCYECGEKGHLSSACP---KKTADQTNS 303
S K++RR CYECGEKGHLS+ACP +K DQ NS
Sbjct: 389 SSKVKRRVCYECGEKGHLSTACPIKLQKADDQVNS 423
>gi|15233246|ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
gi|7019667|emb|CAB75768.1| putative protein [Arabidopsis thaliana]
gi|332645849|gb|AEE79370.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
Length = 597
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 149/326 (45%), Positives = 195/326 (59%), Gaps = 39/326 (11%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT------KAKRTSDFTP 57
P+ G F GIA I F TE KRALA D + M +L IQ Y T + K +S F P
Sbjct: 196 PEDGAFSGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAP 255
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++V+GYNR+YIGNL+WD TE D++KLFSDC I+S+R G NKETGEF+GYAHVDF DS+S+
Sbjct: 256 EMVDGYNRVYIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSV 315
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
++ALKLDQ+V+ GRPVKI CA+ + + T T++AG S + +++
Sbjct: 316 AIALKLDQQVICGRPVKICCALKDRPATDH-----------TPGETNNAG---SYNMEDT 361
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC---LKKTADQT 234
A V A AG D + + S K++RR CYECGEKGHLS+AC L+K DQ
Sbjct: 362 YAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGEKGHLSTACPIKLQKADDQA 421
Query: 235 -------MVTGKVSDNAGSRTGNFAD----NAGLGTTNVSDNAGLSAV---SGKIRRRTC 280
V G+ + + N D N +TN + N G SA +GK++RR C
Sbjct: 422 NSKLGQETVDGRPAMQSYGLPKNSGDSYYMNETYASTNETYNGGYSASAVGTGKVKRRNC 481
Query: 281 YECGEKGHLSSACPKKTAD--QTNST 304
YECGEKGHLS+ACP K + TNST
Sbjct: 482 YECGEKGHLSTACPIKLQNTSHTNST 507
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 147/339 (43%), Gaps = 82/339 (24%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG-- 62
+TG+F+G A ++F+ +V AL LD + G +KI A K + +D TP
Sbjct: 297 ETGEFKGYAHVDFKDSVSVAIALKLDQQVICGRPVKI--CCALKDRPATDHTPGETNNAG 354
Query: 63 -YNR--IY-----IGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDS 114
YN Y + L+ +D + S ++ E GE H+ +
Sbjct: 355 SYNMEDTYAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGE---KGHLSTACP 411
Query: 115 LSLSMA-----LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLG 169
+ L A KL QE V GRP S +P G DS +
Sbjct: 412 IKLQKADDQANSKLGQETVDGRPAMQSYGLPKNSG-------------------DSYYM- 451
Query: 170 TSNDADNSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC--- 226
N ++N N G S V +GK++RR CYECGEKGHLS+AC
Sbjct: 452 ------NETYASTNETYNGGYSASAVG--------TGKVKRRNCYECGEKGHLSTACPIK 497
Query: 227 LKKTAD-------QTMVTG----------KVSDNAGSRTGNFADNA------GLGTTNVS 263
L+ T+ QT+ G K + + + G+F D + + TN +
Sbjct: 498 LQNTSHTNSTLDHQTVEAGPTQVTSYSLQKKTRDTENNGGSFMDESYATVPISIDVTNGA 557
Query: 264 DNAGL-SAVS-GKIRRRTCYECGEKGHLSSACPKKTADQ 300
++A L SAVS GKI++R CYECGEKGHLSSACP K Q
Sbjct: 558 NDASLTSAVSTGKIKKRNCYECGEKGHLSSACPNKLQKQ 596
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 47/275 (17%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N++Y+G + + TE++++ F C I + E G F G A + F AL
Sbjct: 161 NKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKRALA 220
Query: 123 LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS------------KVTDSAGLGT 170
D+ + R + I ++ + + + S+P K ++ + + A T
Sbjct: 221 FDRAAMGDRYLTI------QQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVYIGNLAWDTT 274
Query: 171 SNDADN--SGAVTSNV--AANAGSGTSDVTEHIDLS-----AVSGKIRRRTCYECGEKGH 221
D S V ++V N +G H+D A++ K+ ++ CG
Sbjct: 275 ERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQVI--CGRP-- 330
Query: 222 LSSACLKKTADQTMVTGKVSDNAGSRTGNFADN--------AGLGTTNVSDNAGLSAV-- 271
+ C K T T ++NAGS N D A G + V D +
Sbjct: 331 VKICCALKDRPATDHTPGETNNAGSY--NMEDTYAAADPVPALAGRSEVDDGNYFATTVS 388
Query: 272 SGKIRRRTCYECGEKGHLSSACP---KKTADQTNS 303
S K++RR CYECGEKGHLS+ACP +K DQ NS
Sbjct: 389 SSKVKRRVCYECGEKGHLSTACPIKLQKADDQANS 423
>gi|449513509|ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 432
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 157/231 (67%), Gaps = 28/231 (12%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M FP++GKFRGIAI++F+TE A KRALA DG++M GLFLK+QPYK T+ R +DF+P +V
Sbjct: 220 MKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLV 279
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIYIGNLSWD+TE+DLKKLF +CKI+S+RFG +KETGEFRGYAHVDFSD +SL A
Sbjct: 280 EGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTA 339
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
LKLDQ+++ GRPVKI CAVP K GT N + A
Sbjct: 340 LKLDQKIIHGRPVKIRCAVPKK--------------------------GTENGGGGAVAG 373
Query: 181 TSNVAANAGSGTSDVTE--HIDLSAVSGKIRRRTCYECGEKGHLSSACLKK 229
+ E +SAVSGKIRRRTCYECGEKGHLSS C K
Sbjct: 374 AETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNK 424
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 273 GKIRRRTCYECGEKGHLSSACP-KKTADQTNS 303
GKIRRRTCYECGEKGHLSS CP K+ AD S
Sbjct: 401 GKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
>gi|449459934|ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 432
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 157/231 (67%), Gaps = 28/231 (12%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M FP++GKFRGIAI++F+TE A KRALA DG++M GLFLK+QPYK T+ R +DF+P +V
Sbjct: 220 MKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLV 279
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EGYNRIYIGNLSWD+TE+DLKKLF +CKI+S+RFG +KETGEFRGYAHVDFSD +SL A
Sbjct: 280 EGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTA 339
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAV 180
LKLDQ+++ GRPVKI CAVP K GT N + A
Sbjct: 340 LKLDQKIIHGRPVKIRCAVPKK--------------------------GTENGGGGAVAG 373
Query: 181 TSNVAANAGSGTSDVTE--HIDLSAVSGKIRRRTCYECGEKGHLSSACLKK 229
+ E +SAVSGKIRRRTCYECGEKGHLSS C K
Sbjct: 374 AETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECGEKGHLSSNCPNK 424
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 273 GKIRRRTCYECGEKGHLSSACP-KKTADQTNS 303
GKIRRRTCYECGEKGHLSS CP K+ AD S
Sbjct: 401 GKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 185/326 (56%), Gaps = 39/326 (11%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT------KAKRTSDFTP 57
P+ G F GIA I F TE KRALA D + M +L IQ Y T + K +S F P
Sbjct: 196 PEDGAFSGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRKTSSGFAP 255
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++V+GYNR+YIGNL+WD TE D++KLFSDC I+S+R G NKETGEF+GYAHVDF DS+
Sbjct: 256 EMVDGYNRVYIGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVFC 315
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
+ V+ GRPVKI CA+ + + T T++AG S + +++
Sbjct: 316 GDCAEAGSAVICGRPVKICCALKDRPATDH-----------TPGETNNAG---SYNMEDT 361
Query: 178 GAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC---LKKTADQT 234
A V A AG D + + S K++RR CYECGEKGHLS+AC L+K DQ
Sbjct: 362 YAAADPVPALAGRSEVDDGNYFATTVSSSKVKRRVCYECGEKGHLSTACPIKLQKADDQA 421
Query: 235 -------MVTGKVSDNAGSRTGNFAD----NAGLGTTNVSDNAGLSAV---SGKIRRRTC 280
V G+ + + N D N +TN + N G SA +GK++RR C
Sbjct: 422 NSKLGQETVDGRPAMQSYGLPKNSGDSYYMNETYASTNETYNGGYSASAVGTGKVKRRNC 481
Query: 281 YECGEKGHLSSACPKKTAD--QTNST 304
YECGEKGHLS+ACP K + TNST
Sbjct: 482 YECGEKGHLSTACPIKLQNTSHTNST 507
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 96/207 (46%), Gaps = 62/207 (29%)
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVT 181
KL QE V GRP S +P G DS + N +
Sbjct: 424 KLGQETVDGRPAMQSYGLPKNSG-------------------DSYYM-------NETYAS 457
Query: 182 SNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC---LKKTAD------ 232
+N N G S V +GK++RR CYECGEKGHLS+AC L+ T+
Sbjct: 458 TNETYNGGYSASAVG--------TGKVKRRNCYECGEKGHLSTACPIKLQNTSHTNSTLD 509
Query: 233 -QTMVTG----------KVSDNAGSRTGNFADNA------GLGTTNVSDNAGL-SAVS-G 273
QT+ G K + + + G+F D + + TN +++A L SAVS G
Sbjct: 510 HQTVEAGPAQVTSYSLQKKTRDTENNGGSFMDESYATVPISIDVTNGANDASLTSAVSTG 569
Query: 274 KIRRRTCYECGEKGHLSSACPKKTADQ 300
KI++R CYECGEKGHLSSACP K Q
Sbjct: 570 KIKKRNCYECGEKGHLSSACPNKLQKQ 596
>gi|116786211|gb|ABK24023.1| unknown [Picea sitchensis]
Length = 302
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 114/145 (78%), Gaps = 3/145 (2%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP---YKATKAKRTSDFTP 57
MTFPD+GKFRGIA+I+F+T+ A RALALDG++M G FLKIQ ++++K + + F P
Sbjct: 108 MTFPDSGKFRGIALISFKTKAAATRALALDGADMGGRFLKIQQCRTHRSSKNDKPAGFVP 167
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
V+ NR YIGNL+WDI E+DLK +F DCKIS++R G +K TGEF+GY H+DF+D +SL
Sbjct: 168 TKVDKSNRAYIGNLAWDIAEDDLKVVFGDCKISAIRLGKDKTTGEFKGYGHIDFADEVSL 227
Query: 118 SMALKLDQEVVRGRPVKISCAVPPK 142
+MALKLDQ VV GRP+KI+ A+P +
Sbjct: 228 AMALKLDQTVVCGRPIKIAYAIPKR 252
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+G + + E+D++ F C ++ + T ++G+FRG A + F + + AL L
Sbjct: 77 KVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSGKFRGIALISFKTKAAATRALAL 136
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSN 183
D + GR +KI + R+ +SK AG + ++ A N
Sbjct: 137 DGADMGGRFLKIQ-----------QCRT-----HRSSKNDKPAGFVPTKVDKSNRAYIGN 180
Query: 184 VAANAGSGTSDVTEHIDLSAVSG--KI------RRRTCYECGEKGHLS-----SACLKKT 230
+A D+ E DL V G KI + +T E GH+ S +
Sbjct: 181 LAW-------DIAED-DLKVVFGDCKISAIRLGKDKTTGEFKGYGHIDFADEVSLAMALK 232
Query: 231 ADQTMVTGKVSDNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLS 290
DQT+V G+ A + A+ D+A + + K +RRTCY CG GHLS
Sbjct: 233 LDQTVVCGRPIKIAYAIPKRDAE--------TDDSAKTKSSTEKKKRRTCYHCGMPGHLS 284
Query: 291 SACP 294
S+CP
Sbjct: 285 SSCP 288
>gi|168053751|ref|XP_001779298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669310|gb|EDQ55900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 102/149 (68%), Gaps = 4/149 (2%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA----KRTSDFT 56
MTFPDTGKF+GIA I FRTE A KRA+ALD ++M G FLKI+ K K
Sbjct: 32 MTFPDTGKFKGIAFITFRTEEAAKRAMALDAADMGGRFLKIEMCKIKPLEVGNKPLFKEP 91
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLS 116
PK G YIGNLS+DITE+++++ F CKI S+RF NKETGEFRG+ H+DF+D S
Sbjct: 92 PKKQPGCLAAYIGNLSYDITEKEVRRFFKGCKIESVRFAENKETGEFRGFGHIDFADDES 151
Query: 117 LSMALKLDQEVVRGRPVKISCAVPPKKGI 145
L A+KLDQE + GRP+KI+ +VP K I
Sbjct: 152 LEAAMKLDQEPLLGRPLKIAYSVPQKDKI 180
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 92/239 (38%), Gaps = 34/239 (14%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++ +G + + ITE D+ + F +C I+ L T +TG+F+G A + F + A+ L
Sbjct: 1 KVMVGGMPYYITENDIHEFFQECGTIAELDCMTFPDTGKFKGIAFITFRTEEAAKRAMAL 60
Query: 124 DQEVVRGRPVKIS-CAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTS 182
D + GR +KI C + P + N P K+
Sbjct: 61 DAADMGGRFLKIEMCKIKPLEVGNKPLFKEPPKKQPGC---------------------- 98
Query: 183 NVAANAGSGTSDVTEHIDLSAVSG-KIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVS 241
+AA G+ + D+TE G KI E E G AD + +
Sbjct: 99 -LAAYIGNLSYDITEKEVRRFFKGCKIESVRFAENKETGEFRGFGHIDFADDESLEAAMK 157
Query: 242 DNAGSRTGNFADNAGLGTTNVSDNAGLSAVSGKIR----RRTCYECGEKGHLSSACPKK 296
+ G A +V + V G + ++ C+ CGE+GH+S CP K
Sbjct: 158 LDQEPLLGRPLKIA----YSVPQKDKIMGVRGGSKPAETKKGCFTCGEEGHMSYNCPLK 212
>gi|115450405|ref|NP_001048803.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|25446691|gb|AAN74838.1| Unknown protein [Oryza sativa Japonica Group]
gi|108705923|gb|ABF93718.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113547274|dbj|BAF10717.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|125584746|gb|EAZ25410.1| hypothetical protein OsJ_09226 [Oryza sativa Japonica Group]
gi|215694916|dbj|BAG90107.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 92/142 (64%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYK---ATKAKRTSDFT--P 57
FPD+G FRG+A ++F + V ++L LDG ++ F++++ + +K KRT +F P
Sbjct: 107 FPDSGNFRGLAFVSFESNEVVMKSLELDGFKIGNRFMRVERCRLAAGSKRKRTVEFQTDP 166
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K +G Y+GNL WD+TE DL+ F KISS+RF NK TG+ RG+ HVDF D SL
Sbjct: 167 KKADGCLSAYVGNLKWDVTETDLRDFFKSLKISSIRFAINKRTGDSRGFCHVDFEDDESL 226
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q +RGRP+KIS AV
Sbjct: 227 EKAVGMNQSELRGRPIKISYAV 248
>gi|125542191|gb|EAY88330.1| hypothetical protein OsI_09789 [Oryza sativa Indica Group]
Length = 252
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYK---ATKAKRTSDFT--P 57
FPD+G FRG+A ++F + ++L LDG ++ F++++ + +K KRT +F P
Sbjct: 107 FPDSGNFRGLAFVSFESNEVAMKSLELDGFKIGNRFMRVERCRLAAGSKRKRTVEFQTDP 166
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K +G Y+GNL WD+TE DL+ F KISS+RF NK TG+ RG+ HVDF D SL
Sbjct: 167 KKADGCLSAYVGNLKWDVTETDLRDFFKSLKISSIRFAINKRTGDSRGFCHVDFEDDESL 226
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q +RGRP+KIS AV
Sbjct: 227 EKAVGMNQSELRGRPIKISYAV 248
>gi|384253943|gb|EIE27417.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 296
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 16/153 (10%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-------- 52
M FPDTG+F+GIA I F+TEG K AL DG +D + +K++P + KR
Sbjct: 138 MRFPDTGRFKGIAFITFKTEGGYKAALECDGMTIDTVQIKVEPCISAGPKRKKQRNEVVS 197
Query: 53 -------SDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRG 105
S PK VEGYN Y+GN++++ E DL++L + C+I+ +R T+K+TG+F+G
Sbjct: 198 QTNRKAHSGAAPK-VEGYNVAYVGNIAFEAGESDLRELLAGCEITKVRRHTDKDTGKFKG 256
Query: 106 YAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
YAHV F+D SL A++ D ++GR +++ A
Sbjct: 257 YAHVHFADEESLDRAMEFDGAALKGRRIRVGYA 289
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+++G + + E D+ +S C +I SL +TG F+G A + F AL+
Sbjct: 107 RVFVGGMPFGYEESDVLDYWSYCGEIESLDLMRFPDTGRFKGIAFITFKTEGGYKAALEC 166
Query: 124 DQEVVRGRPVKISCAVP--PKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVT 181
D + +K+ + PK+ +N++A S G + N A
Sbjct: 167 DGMTIDTVQIKVEPCISAGPKRKKQRNEVVSQTNRKAHS------GAAPKVEGYNV-AYV 219
Query: 182 SNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGE-KGH 221
N+A AG SD+ E + ++ K+RR T + G+ KG+
Sbjct: 220 GNIAFEAGE--SDLRELLAGCEIT-KVRRHTDKDTGKFKGY 257
>gi|302817851|ref|XP_002990600.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
gi|300141522|gb|EFJ08232.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
Length = 157
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 16/140 (11%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA-KRTSDFTPKIV 60
TFPDTG+FRG+A I F+ +D LFL + + +T P
Sbjct: 33 TFPDTGRFRGLAFITFK---------------VDSLFLFRSKLSSMECLSQTQAAPPPKT 77
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EG +Y+GNLSWD TE+DL++ F CKI+S+R +KET EF+G+ HVDF D S+ A
Sbjct: 78 EGCTSVYVGNLSWDATEKDLRQFFKRCKITSVRLALDKETREFKGFGHVDFEDDESVERA 137
Query: 121 LKLDQEVVRGRPVKISCAVP 140
+KLDQ++ RP+KI+ AVP
Sbjct: 138 IKLDQKLFLNRPIKIAYAVP 157
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS-DSLSL 117
+IY G + + +E+++ FS+C I + + T +TG FRG A + F DSL L
Sbjct: 1 KIYAGGMPYTTSEDEIHSYFSECGAIEEIDYTTFPDTGRFRGLAFITFKVDSLFL 55
>gi|302770591|ref|XP_002968714.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
gi|300163219|gb|EFJ29830.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
Length = 157
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 16/140 (11%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA-KRTSDFTPKIV 60
TFPDTG+FRG+A I F+ +D LFL + + +T P
Sbjct: 33 TFPDTGRFRGLAFITFK---------------VDSLFLFRSKLSSMECLSQTQAAPPPKT 77
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
EG +Y+GNLSWD TE+DL++ F CKI+S+R +KET EF+G+ HVDF D S+ A
Sbjct: 78 EGCTSVYVGNLSWDATEKDLRQFFKRCKITSVRLALDKETREFKGFGHVDFEDDESVERA 137
Query: 121 LKLDQEVVRGRPVKISCAVP 140
+KLDQ++ RP+KI+ AVP
Sbjct: 138 IKLDQKLFLNRPIKIAYAVP 157
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS-DSLSL 117
+IY G + + +E+D+ FS+C I + + T +TG FRG A + F DSL L
Sbjct: 1 KIYAGGMPYTTSEDDIHSYFSECGAIEEIDYTTFPDTGRFRGLAFITFKVDSLFL 55
>gi|326512286|dbj|BAJ96124.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 93/142 (65%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT---KAKRTSDFT--P 57
FPD+G FRG+A + F ++ ++L LDG ++ F++++ + T K ++ ++F P
Sbjct: 91 FPDSGNFRGLAFVTFESDEVALKSLELDGYKIGNRFMRVERCRITASSKRQKKTEFQSDP 150
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+ +G Y+GNLSW+I+E+DL+ F +I+S+RF +K TG+ RG+ HVDF D SL
Sbjct: 151 EKPDGCLSAYVGNLSWNISEKDLRDFFKSSRIASIRFAIDKRTGDSRGFCHVDFEDDESL 210
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q +RGRPVKI+ A+
Sbjct: 211 EKAVGMNQSELRGRPVKIAYAI 232
>gi|242042437|ref|XP_002468613.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
gi|241922467|gb|EER95611.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
Length = 253
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA---KRTSDFT--P 57
FPD+G FRG+A I F T ++L LDG ++ +++++ + T KR ++F P
Sbjct: 108 FPDSGNFRGLAFICFETNEDAIKSLELDGFKIGSRYMRVERCRVTATSNKKRKAEFQTDP 167
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K EG Y+GNLSW++TE+DL+ F KI+S+RF +K TG RG+ HVDF D SL
Sbjct: 168 KKSEGCLSAYVGNLSWNVTEKDLRDFFRSSKIASVRFAIDKRTGGSRGFCHVDFQDDESL 227
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q ++GRPVK++ +V
Sbjct: 228 EKAVAMNQSELQGRPVKVAYSV 249
>gi|357114300|ref|XP_003558938.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 255
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 91/142 (64%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT---KAKRTSDFT--P 57
FPD+G F G+A + F ++ ++L LDG ++ F++++ + T K + S+F P
Sbjct: 110 FPDSGNFSGLAFVTFESDEVAMKSLELDGHKLGYRFMRVERCRITASSKRPKKSEFQTDP 169
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+ +G Y+GNLSW++TE+DL+ F +I+S+RF +K TG+ RG+ H+DF D SL
Sbjct: 170 EKPDGCLSAYVGNLSWNVTEKDLRDFFKSSRIASVRFAIDKRTGDSRGFGHIDFEDDESL 229
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q +RGRPVKI+ A+
Sbjct: 230 EKAVGMNQSELRGRPVKIAYAI 251
>gi|226532724|ref|NP_001151236.1| RNA binding protein [Zea mays]
gi|195645238|gb|ACG42087.1| RNA binding protein [Zea mays]
Length = 257
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA---KRTSDFT--P 57
FPD+G FRG+A + F +E ++L LDG ++ +++++ + T KR ++F P
Sbjct: 112 FPDSGNFRGLAFLCFESEEDAIKSLELDGFKIGSRYMRVERCRVTATSNKKRKAEFETDP 171
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K EG Y+GNLSW++ E DL+ F KI+S+RF +K TG RG+ HV+F D SL
Sbjct: 172 KKSEGCLSAYVGNLSWNVDENDLRGFFGPSKIASVRFAVDKRTGGSRGFCHVEFQDDESL 231
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q ++GRPVK++ +V
Sbjct: 232 EKAIAMNQSKLQGRPVKVAYSV 253
>gi|194697124|gb|ACF82646.1| unknown [Zea mays]
gi|414864467|tpg|DAA43024.1| TPA: RNA binding protein [Zea mays]
Length = 257
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA---KRTSDFT--P 57
FPD+G FRG+A + F +E ++L LDG ++ +++++ + T KR ++F P
Sbjct: 112 FPDSGNFRGLAFLCFESEEDAIKSLELDGFKIGSRYMRVERCRVTATSNKKRKAEFETDP 171
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K EG Y+GNLSW++ E DL+ F KI+S+RF +K TG RG+ HV+F D SL
Sbjct: 172 KKSEGCLSAYVGNLSWNVDENDLRGFFGPSKIASVRFAVDKRTGGSRGFCHVEFQDDESL 231
Query: 118 SMALKLDQEVVRGRPVKISCAV 139
A+ ++Q ++GRPVK++ +V
Sbjct: 232 EKAIAMNQSKLQGRPVKVAYSV 253
>gi|255084515|ref|XP_002508832.1| predicted protein [Micromonas sp. RCC299]
gi|226524109|gb|ACO70090.1| predicted protein [Micromonas sp. RCC299]
Length = 424
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPY-------KATKAKRTS 53
MTFPD+G+FRGIAI+ F T A K ALA + E +G FL ++ Y KA AK
Sbjct: 238 MTFPDSGRFRGIAIVTFATAEAAKGALAWNNEEWEGKFLVVRKYAPKDGATKAVAAK--E 295
Query: 54 DFTP----KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHV 109
D TP K EG +I NL + +TEE L+ C++ +R G +KETGEF+G+AHV
Sbjct: 296 DATPREEVKKTEGQTIAFIANLDYSVTEEQLRTALVGCEVKEVRMGKDKETGEFKGFAHV 355
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKISCAV---PPKK 143
+F L A+ L + GR +KI+ A PPK+
Sbjct: 356 EFVGDDDLEQAVSLSGTNLMGREMKIAYATARKPPKE 392
>gi|303280433|ref|XP_003059509.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459345|gb|EEH56641.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 490
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--------- 51
MTFPD+G+FRGIAII F T A K ALA +G D FL ++ Y A
Sbjct: 285 MTFPDSGRFRGIAIITFATREAAKGALAWNGEMWDEKFLTVKKYAPKNAPPKDVPDPSAP 344
Query: 52 TSDFTPKI--VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHV 109
++ P++ EG +I NL+WD TEE LK C+I +R GT+KETG F+G+AH
Sbjct: 345 PAEPRPEVEKTEGQLVAFIANLAWDTTEETLKNALVGCEIKEIRMGTDKETGAFKGFAHA 404
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSN 155
+F L A+ L + GR +KI+ A KK + + +N
Sbjct: 405 EFVGDDDLENAVALSGTTLCGREMKITYATKRKKSWEEREKEREAN 450
>gi|145346830|ref|XP_001417885.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578113|gb|ABO96178.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 303
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI- 59
MTFPDTG+FRGIAI+ F + AL +E DG+ L ++PY + K PK+
Sbjct: 133 MTFPDTGRFRGIAIVTFASANIANEALRWHDTEWDGMVLVVKPY---EPKTPEAPKPKLN 189
Query: 60 ---VEGYNRIYIGNLSWDITEEDLKKLF--SDCKISSLRFGTNKETGEFRGYAHVDFSDS 114
VEG + ++ NL + +TE+ L++ F SD I+ +R G +KETG+FRGYAH++F+
Sbjct: 190 VGKVEGQHIAFVANLDYSVTEDILRETFSPSDGAITDVRMGVDKETGDFRGYAHIEFASD 249
Query: 115 LSLSMALKLD-QEVVRGRPVKISCAVPPKKGINSKSR 150
L AL D +E+V GR +K++ A K+ R
Sbjct: 250 GDLERALLRDGEELVGGRAMKVTYATARKQTTTKPER 286
>gi|308804599|ref|XP_003079612.1| putativ (ISS) [Ostreococcus tauri]
gi|116058067|emb|CAL54270.1| putativ (ISS) [Ostreococcus tauri]
Length = 417
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI- 59
MTFPD+G+FRGIAI+ F + + AL +E DG+ L ++PY A KA ++ +
Sbjct: 246 MTFPDSGRFRGIAIVTFGSANIAREALRWHDTEWDGMSLVVKPY-APKAPASAKLKSDVR 304
Query: 60 -VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+EG ++ NL + +TEE L++ FS +I +R G +K TG+FRGYAHV+F+ L
Sbjct: 305 KIEGQFVAFVANLDYSVTEEMLRETFS-GEIKDVRMGNDKATGDFRGYAHVEFATDEDLE 363
Query: 119 MALKLD-QEVVRGRPVKISCA 138
AL+ + +E++ GR +K++ A
Sbjct: 364 RALRKNGEELIGGRAMKVTYA 384
>gi|412988944|emb|CCO15535.1| predicted protein [Bathycoccus prasinos]
Length = 428
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M F D+G+FRGIAII F AL DG + +G + +PYK KA + PK +
Sbjct: 255 MVFADSGRFRGIAIITFHNVADRDEALKFDGEDWEGFVMVCKPYKVKKADADTKDPPKKI 314
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+G +++ NL + +TE+ L++ F+ +I +R G +K+T +F+G+AH++ L+
Sbjct: 315 DGQRVVFVANLDYSVTEDLLRETFAQGSEIKEIRMGLDKDTQDFKGFAHIELVSDGDLAR 374
Query: 120 ALKLDQEVVRGRPVKISCAVPPKK 143
ALK + + + GR +K++ A +K
Sbjct: 375 ALKKNGKELLGREMKVAYATERRK 398
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G+ G A + F T A + ALA+DG + G ++KI + + K D P EG +
Sbjct: 285 GRSSGTAFVTFATSEAAEAALAMDGQDFGGRWMKI---RTAEKKNMFDEKP---EGCTSV 338
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+IGNLSWD+ E +++ F +C +I S R T++ETGEFRG+ HVDF+ + ++ A+KL
Sbjct: 339 FIGNLSWDVDENTVRETFGECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKLAG 398
Query: 126 EVVRGRPVKISCA 138
V GR ++++ A
Sbjct: 399 SYVNGRAIRVNYA 411
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I+I L W TE+++K+ F+ C +++ R + G G A V F+ S + AL +D
Sbjct: 251 IFIAGLPWSATEDEVKEHFAGCGEVTGARIPL--QNGRSSGTAFVTFATSEAAEAALAMD 308
Query: 125 QEVVRGRPVKISCA 138
+ GR +KI A
Sbjct: 309 GQDFGGRWMKIRTA 322
>gi|299470875|emb|CBN78824.1| Protein for assembly of pre-ribosomal particles containing 18S rRNA
[Ectocarpus siliculosus]
Length = 517
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI-VEG 62
PD G+ G A + F + A +A+ LDG E+ G +LKI K + PK+ G
Sbjct: 317 PD-GRSSGTAYVTFDSAAAAAKAIELDGQELGGRWLKIM-MSFEKPDHARNGEPKVKPAG 374
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++IGNLSW I E+ +++ F +C I S+RF ++ETGEFRG+ HV+F D + A+
Sbjct: 375 CTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAM 434
Query: 122 KLDQEVVRGRPVKISCAVP 140
KL V GRP+++ A P
Sbjct: 435 KLANSDVMGRPIRVDYAAP 453
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 40 KIQPYKATKAKRTSDFTPKIVEGYN-RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTN 97
K +P K KA + K + N +IY+ L WD +++D+K F C KI ++ N
Sbjct: 257 KEKPSKKRKADDAEEGDAKKAKSENSKIYLRGLPWDTSDDDVKDFFKACGKIVTVEQPKN 316
Query: 98 KETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKI 135
+ G G A+V F + + + A++LD + + GR +KI
Sbjct: 317 PD-GRSSGTAYVTFDSAAAAAKAIELDGQELGGRWLKI 353
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 7/135 (5%)
Query: 11 GIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT-----KAKRTSDFTPKI-VEGYN 64
G + F+ +V +A+A+DG E+ G ++K++ T K T + PK +G
Sbjct: 66 GFGFLTFKDADSVAKAVAMDGQELMGRWVKVKEADGTEGSAGKKPFTPNREPKPKPDGCT 125
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
I++GNLSWD+ E+ ++ F+DC ++ ++RF T++ETG+F+G+ HV F++S + +A+
Sbjct: 126 TIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK 185
Query: 124 DQEVVRGRPVKISCA 138
E V GR +++ A
Sbjct: 186 GGEFVAGRAIRVDFA 200
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+++G L + TE+D+KK+F C I ++ N ++ G+ + F D+ S++ A+ +
Sbjct: 26 RVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADSRP-AGFGFLTFKDADSVAKAVAM 84
Query: 124 DQEVVRGRPVKISCA 138
D + + GR VK+ A
Sbjct: 85 DGQELMGRWVKVKEA 99
>gi|323452921|gb|EGB08794.1| hypothetical protein AURANDRAFT_63849 [Aureococcus anophagefferens]
Length = 322
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 3 FPDT-GKFRGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIV 60
F DT GKF GIA + F E A++RAL LDGS D +++ + A R P+
Sbjct: 153 FDDTPGKFCGIAFVTFGDEDALQRALNLDGSAYEDDERCRLKVRRDQTANRRP--PPERK 210
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSD--CKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
G +Y GN+ WD + +D+ F++ C +++LR+ T+ +TG FRG+ HV+F D SL
Sbjct: 211 AGSLTVYAGNMGWDTSRDDVAAYFAEQGCAVANLRYHTDADTGNFRGFCHVEFEDEASLE 270
Query: 119 MALKLDQEVVRGRPVKISCAVPPKK 143
AL RGR ++IS + KK
Sbjct: 271 AALACAGTKWRGRDLRISHSETAKK 295
>gi|196007906|ref|XP_002113819.1| hypothetical protein TRIADDRAFT_57615 [Trichoplax adhaerens]
gi|190584223|gb|EDV24293.1| hypothetical protein TRIADDRAFT_57615 [Trichoplax adhaerens]
Length = 575
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRT------- 52
+TG +G +F T + A+ LDGSE+DG L+I +P ++ +R+
Sbjct: 368 NTGDSKGFGYADFETVADAQNAIKLDGSELDGRNLRINDANAKPTTPSQQRRSFSNPSSG 427
Query: 53 -SDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDF 111
E +++ NLS++ TEE L+KLF DCK ++R T++ETG+ RG+AH+DF
Sbjct: 428 GRGGGGGNSEPSTCLFVKNLSYNTTEETLQKLFKDCK--NVRIATDRETGKPRGFAHIDF 485
Query: 112 SDSLSLSMALK-LDQEVVRGRPVKISCA 138
DS + S ALK + + + GR + + A
Sbjct: 486 YDSEATSKALKNMQNKSIDGRNIFLDFA 513
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSD--CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++IG +S+D + L F+ + +S+R T++ TG+ +G+ + DF A+KL
Sbjct: 333 VFIGKISYDTDTDSLTNFFTSNGLEPASVRIITDRNTGDSKGFGYADFETVADAQNAIKL 392
Query: 124 DQEVVRGRPVKISCA 138
D + GR ++I+ A
Sbjct: 393 DGSELDGRNLRINDA 407
>gi|348690229|gb|EGZ30043.1| hypothetical protein PHYSODRAFT_353718 [Phytophthora sojae]
Length = 197
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 29 LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC- 87
+DG + G ++KI + + K D P EG I+IGNL+WD+ E +++ F +C
Sbjct: 1 MDGQDFGGRWMKI---RTAEKKNMFDEKP---EGCTSIFIGNLAWDVDENTVREFFGECG 54
Query: 88 KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
+I+S R T++ETGEFRG+ HVDF+ + ++ A+KL E + R ++++ A
Sbjct: 55 EITSCRLATDRETGEFRGFGHVDFATTEAVDEAVKLAGEYLNNRAIRVNYA 105
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYK-----ATKAKRTSDFTPKI 59
+TGK RG + F T AV+ AL L+G E+DG + I + A + KR F
Sbjct: 333 NTGKSRGFGYVEFATTEAVEAALLLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSA 392
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
E +++GNLSWD TE+ + ++F + + S+R T++ETG +G+ +V+F+D +
Sbjct: 393 SEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAK 452
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
A + L V GRP+++ + P
Sbjct: 453 KAFEGLSGTEVAGRPIRLDYSQP 475
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
EG I++G LSW++ + L + F++C ++ S R ++ TG+ RG+ +V+F+ + ++
Sbjct: 294 EGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVEA 353
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
AL L+ + + GRPV I + KG + R+
Sbjct: 354 ALLLNGKEIDGRPVNIDKSEQKDKGAAREKRA 385
>gi|145531030|ref|XP_001451287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418931|emb|CAK83890.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
+ D+ + G I F A+++ALAL+GS++ G ++ ++ K T++++ S P+
Sbjct: 36 YQDSNRLLGYGHITFNDSDAIQKALALNGSQLGGRYIDVKEAKGTQSQKPSVPPPEC--- 92
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+ I++ NLS+D+ + + F C K++++R N T F+G+A++DF D S+ AL
Sbjct: 93 -HTIFVKNLSYDLNADQIGDSFRPCGKVANVRMVYNTVTDNFKGFAYIDFEDHQSVIKAL 151
Query: 122 KLDQEVVRGRPVKISCAV-PPKKGINSKSRSL 152
+++ + V GR V++ + PK G ++ +
Sbjct: 152 QMNGKKVHGRQVQVDFDIKKPKAGFRYSTKQV 183
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+++I L + +E D++ LF +C +I S++ +++ GY H+ F+DS ++ AL L
Sbjct: 3 QVFISGLPYTASENDVQTLFEECGEILSIKLPRYQDSNRLLGYGHITFNDSDAIQKALAL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + GR + + A KG S+ S+P
Sbjct: 63 NGSQLGGRYIDVKEA----KGTQSQKPSVP 88
>gi|302836806|ref|XP_002949963.1| hypothetical protein VOLCADRAFT_90315 [Volvox carteri f.
nagariensis]
gi|300264872|gb|EFJ49066.1| hypothetical protein VOLCADRAFT_90315 [Volvox carteri f.
nagariensis]
Length = 658
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 29/169 (17%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT-----KAKRTS-- 53
+TFPD+G F G A I F+T+ + ALA G ++G L+++ KA KA+ S
Sbjct: 485 LTFPDSGNFNGTAYITFKTQEGYEAALACKGEMLEGRALRVEKCKAAAELKGKARGASGA 544
Query: 54 ---------------DFTPKI-----VEGYNRIYIGNLSWDITEEDLKKLFSDCKI--SS 91
D T V GY Y GN+S++ E+L++LFS +
Sbjct: 545 PGQRASGGDGGSSAADGTSGGGGGGRVAGYPVAYCGNISFEAGAEELQQLFSRAGAVPTK 604
Query: 92 LRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+R ++K TG RG+AHV F++ + A+ LD GR +++S A P
Sbjct: 605 IRLHSDKATGRSRGFAHVHFANDEDVDKAVALDGTSFHGRKIRVSYAQP 653
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
P + F+ A + TE + R +ALD S DG F P+
Sbjct: 418 PFSFSFQLQADVEAETEARLARLMALD-STKDG------------------FVPR----- 453
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
RI++ L + E +++ +S C ++ S+ T ++G F G A++ F AL
Sbjct: 454 -RIWVSGLPHEFDEATVREYWSYCGEVESMHLLTFPDSGNFNGTAYITFKTQEGYEAALA 512
Query: 123 LDQEVVRGRPVKI 135
E++ GR +++
Sbjct: 513 CKGEMLEGRALRV 525
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAKRT--SDFTP-- 57
+TG RG A + R+ + A+ ALDG E+DG +F+K+ + K + TP
Sbjct: 159 ETGISRGTAFVTMRSLAEARTAINALDGFELDGREVFVKLASDVISNRKNVNLAHITPMK 218
Query: 58 -KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
I E +++Y+GNL+W + +DL++LF+ C + S R T+++ G R Y + FS +
Sbjct: 219 DHIFESPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAE 278
Query: 116 SLSMALKLDQEVVRGRPVKISCAV 139
L ALKLD+ V GR + + A+
Sbjct: 279 ELEAALKLDRTVFFGRDIVVKEAI 302
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 6 TGKFRGIAIINF-RTEGAVKRALALDGSEMDGLFLKI---QPYK------ATKAKRTSDF 55
TG+ +G + F A+ L+ S+ D L + QP AT + R +
Sbjct: 48 TGRSKGFGFVTFCEYSNALDAVDQLNQSKWDKRTLNVRFLQPKNGSGANAATVSNRPAKV 107
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
EG IY+GNL++DITEE L+K+F C I ++RF + +T EFRG+ +V F +
Sbjct: 108 IGPRPEGCTTIYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEE 167
Query: 115 LSLSMALKLDQEVVRGRPVKI 135
A+KLD VV GRP+ I
Sbjct: 168 GPCEAAVKLDGMVVMGRPMNI 188
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---PYK--ATKAKRTSDFTPKI 59
+TGK RG ++F T A ++AL L+G E+D +K+ P A + KR F
Sbjct: 363 NTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPIKVDISTPRNPDAARQKRAQTFGDVT 422
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
N +++GNLS++ +E+ + LF+D + S+R T++E+G +G+ +V+F D
Sbjct: 423 SPPSNTLFVGNLSFNTSEDSVWSLFNDYGVKSVRLPTDRESGRPKGFGYVEFEDVEGAKK 482
Query: 120 ALKLDQEV-VRGRPVKISCAVP 140
A + + + GRP+++ + P
Sbjct: 483 AFEANNGADLDGRPIRLDYSQP 504
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW++ + L F+ C +I S ++ TG+ RG+ +V F+ + AL+L+
Sbjct: 329 VFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALELN 388
Query: 125 QEVVRGRPVKISCAVP 140
+ + RP+K+ + P
Sbjct: 389 GKEIDNRPIKVDISTP 404
>gi|219114504|ref|XP_002176422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402668|gb|EEC42658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 104
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
EG ++IGNL+WD+ E+ +K+ F+DC +IS +RF T++ETG+F+G+ H++F + S
Sbjct: 17 EGCVTVFIGNLAWDVDEDTIKQSFADCGEISQVRFATDRETGDFKGFGHIEFVATESTDK 76
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
A+++ + GRPV++ A N K S P
Sbjct: 77 AIEMAGTEILGRPVRVDFA-------NDKRNSAP 103
>gi|159480766|ref|XP_001698453.1| hypothetical protein CHLREDRAFT_187814 [Chlamydomonas reinhardtii]
gi|158282193|gb|EDP07946.1| predicted protein [Chlamydomonas reinhardtii]
Length = 434
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+TF D+G F G A I F+T+ + ALA +G ++G L+++ KA + + V
Sbjct: 191 LTFKDSGNFNGTAFITFKTQEGYEAALACNGEMLEGRPLRVEKCKAAAELKGN------V 244
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
GY +Y+GN+S+++ E +L+KLF + + S +R +K G +G+AHV F++ +
Sbjct: 245 AGYPVVYVGNVSFEVGEPELRKLFKERAGVEPSEVRLHKDK-NGRPKGFAHVHFANDDDV 303
Query: 118 SMALKLDQEVVRGRPVKISCAVP 140
A+ L+ R ++IS A P
Sbjct: 304 DKAVALNGLEFEDRNIRISYAQP 326
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI---QP---YKATKAKRTSDFTPKIV 60
G+ +G A ++F + V +A+AL+G E + ++I QP A + V
Sbjct: 287 GRPKGFAHVHFANDDDVDKAVALNGLEFEDRNIRISYAQPKPGEAAAGKGGAAAAAGGKV 346
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
GY +Y+GN+S+++ E +L+KLF + + S +R +K G +G+AHV F++ +
Sbjct: 347 AGYPVVYVGNVSFEVGEPELRKLFKERAGVEPSEVRLHKDK-AGRSKGFAHVHFANDNDV 405
Query: 118 SMALKLDQEVVRGRPVKISCAVP 140
A+ L+ R ++IS A P
Sbjct: 406 DKAVALNGLEFEDRNIRISYAQP 428
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
+TGK RG + F T AV A+A +G E+DG + I + A + KR + K
Sbjct: 80 NTGKSRGFGYVTFATVEAVDAAIAQNGKEIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKA 139
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
E + +++GNLSWD TE+ L + F++ I S+R T++ETG+ +G+A+V+FSD +
Sbjct: 140 SEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASK 199
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
A + V GR +++ + P
Sbjct: 200 KAFEGAAGAEVAGRNIRVDFSQP 222
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW++ + L + F++C ++ S R ++ TG+ RG+ +V F+ ++ A+ +
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIAQN 105
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRS 151
+ + GR V I ++ KG + R+
Sbjct: 106 GKEIDGRAVNIDKSIEKDKGAVRQKRA 132
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
+ G+ +GIA ++F TE +A+ + SE G +L I+ K K +R + + E
Sbjct: 299 EQGRSKGIAFVSFETEEGCNKAVEMSNSEFMGRYLIIEKTK-PKTERPAHLP--VDEDSK 355
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
I++GNLS+ +E LKK F+ C K++ R + G+ RG+ HV+F + + ALK
Sbjct: 356 TIFVGNLSFRTDKETLKKFFASCGKVADARIA--EADGKSRGFGHVEFEERSGVENALKK 413
Query: 124 DQEVVRGRPVKISCA 138
E + GRP+K+ A
Sbjct: 414 VGEQIDGRPIKVDVA 428
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
EG IY+GNL++DITEE L+K+F C I ++RF + +T EFRG+ +V F +
Sbjct: 116 EGCTTIYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGPCEA 175
Query: 120 ALKLDQEVVRGRPVKI 135
A+KLD VV GRP+ I
Sbjct: 176 AVKLDGMVVMGRPMSI 191
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
+TGK RG ++F T AV++AL ++G E+DG +K+ + + KR F ++
Sbjct: 35 NTGKSRGFGYVHFTTPDAVEKALQMNGQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDEV 94
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ +++GNLS+ +TE+ + F+D + S+R T++ETG +G+ +V+F D
Sbjct: 95 SAPSSTLFVGNLSFGVTEDTVWSFFNDYGVKSVRLPTDRETGRPKGFGYVEFEDIDGAKK 154
Query: 120 ALK-LDQEVVRGRPVKISCAVP 140
A + + + GR +++ + P
Sbjct: 155 AFEAANGSEIEGRSIRLDYSQP 176
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW + + L + F+DC +I S ++ TG+ RG+ +V F+ ++ AL+++
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMN 60
Query: 125 QEVVRGRPVKISCAVPPKK 143
+ + GR +K+ ++P K
Sbjct: 61 GQEIDGRAIKVDRSLPRDK 79
>gi|413941709|gb|AFW74358.1| hypothetical protein ZEAMMB73_309849 [Zea mays]
Length = 826
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAKRT--SDFTP-- 57
++G RG A + R+ + A+ ALDG +MDG +F+K+ + K + TP
Sbjct: 677 ESGISRGTASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITPTK 736
Query: 58 -KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
I E +++Y+GNL+W + +DL++LF+ C + S R T+++ G R Y + FS +
Sbjct: 737 DHIFETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQ 796
Query: 116 SLSMALKLDQEVVRGRPVKI 135
L ALKLD+ V GR + +
Sbjct: 797 ELEEALKLDRTVFFGRDIVV 816
>gi|397582877|gb|EJK52449.1| hypothetical protein THAOC_28271, partial [Thalassiosira oceanica]
Length = 842
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
AII F AL +G++ G +L I+ Y ++ + + EG +++GN+S
Sbjct: 647 AIIEFSDPSGSASALRHNGADFGGRWLNIK-YSTSRPITEARAPSQKEEGCVTVFVGNMS 705
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+ I E+ +++ F DC +I+S+RF +KETG F+GY HV+F +S + A+ L V R
Sbjct: 706 FHIDEDTVRETFKDCGEIASIRFAEDKETGVFKGYGHVEFVESKATDRAVALAGTYVMNR 765
Query: 132 PVKISCA 138
P+++ A
Sbjct: 766 PIRVDFA 772
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
+ D+ + G I F A+++ALAL+G+++ G ++ ++ K T+ ++ + P +
Sbjct: 36 YQDSNRLLGYGHITFSDSEAIQKALALNGTQLGGRYIDVKEAKGTQPQKPNVPPPDCLT- 94
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
I++ NLS+D+ + + F C K++++R N + F+G+A++DF D S+ AL
Sbjct: 95 ---IFVKNLSYDLNADQIGDSFRPCGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKAL 151
Query: 122 KLDQEVVRGRPVKISCAVP-PKKGINSKSRSL 152
+++ + V GR V++ V PK G + + +
Sbjct: 152 QMNGKKVHGRQVQVDFDVKRPKAGYRYQPKQV 183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+++I L + +E D++ LF DC +I S++ +++ GY H+ FSDS ++ AL L
Sbjct: 3 QVFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALAL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + GR + + A KG + ++P
Sbjct: 63 NGTQLGGRYIDVKEA----KGTQPQKPNVP 88
>gi|212722626|ref|NP_001131649.1| uncharacterized protein LOC100193009 [Zea mays]
gi|194692152|gb|ACF80160.1| unknown [Zea mays]
Length = 314
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAKRT--SDFTP-- 57
++G RG A + R+ + A+ ALDG +MDG +F+K+ + K + TP
Sbjct: 165 ESGISRGTASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITPTK 224
Query: 58 -KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
I E +++Y+GNL+W + +DL++LF+ C + S R T+++ G R Y + FS +
Sbjct: 225 DHIFETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQ 284
Query: 116 SLSMALKLDQEVVRGRPVKISCA 138
L ALKLD+ V GR + + A
Sbjct: 285 ELEEALKLDRTVFFGRDIVVKEA 307
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
+TGK RG + F + AV +AL L+G E+DG + I + + +R F
Sbjct: 345 NTGKSRGFGFVTFASPEAVDKALELNGKEIDGRPINIDKSVEKDQNQVRERRAKAFGDAT 404
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+ +++GNLS+D TE+ L ++FSD + S+R T++E+G +G+ +V+F D S
Sbjct: 405 SAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAK 464
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
A + L + + GR V++ + P
Sbjct: 465 KAHEGLAGQEIAGRAVRLDFSQP 487
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW++ + L+ F++C ++ S R ++ TG+ RG+ V F+ ++ AL+L+
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALELN 370
Query: 125 QEVVRGRPVKISCAV 139
+ + GRP+ I +V
Sbjct: 371 GKEIDGRPINIDKSV 385
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---PYKAT--KAKRTSDFTPKI 59
+TG+ RG ++F T AV++AL ++G E+DG +K+ P + + +R F +I
Sbjct: 344 NTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEI 403
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++IGNL + ITE+ L F + ++R T++ETG+ +G+ +V+ +
Sbjct: 404 SPPSSTLFIGNLPFSITEDGLWSYFDGHSVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 120 ALK-LDQEVVRGRPVKISCAVP 140
A + + + + GR V++ + P
Sbjct: 464 AFEAISGQEIEGRRVRVDYSQP 485
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW + + L + FS+C ++SS ++ TG RG+ +V FS + ++ ALK++
Sbjct: 310 IFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMN 369
Query: 125 QEVVRGRPVKISCAVPP 141
+ GR +K+ + PP
Sbjct: 370 GYEIDGRAIKVDLSTPP 386
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---PYKAT--KAKRTSDFTPKI 59
+TG+ RG ++F T AV++AL ++G E+DG +K+ P + + +R F +I
Sbjct: 344 NTGRSRGFGYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEI 403
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++IGNL + ITE+ L F + ++R T++ETG+ +G+ +V+ +
Sbjct: 404 SPPSSTLFIGNLPFSITEDGLWSYFDGHSVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 120 ALK-LDQEVVRGRPVKISCAVP 140
A + + + + GR V++ + P
Sbjct: 464 AFEAISGQEIEGRRVRVDYSQP 485
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW + + L + FS+C ++SS ++ TG RG+ +V FS + ++ ALK++
Sbjct: 310 IFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKMN 369
Query: 125 QEVVRGRPVKISCAVPP 141
+ GR +K+ + PP
Sbjct: 370 GYEIDGRAIKVDLSTPP 386
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
+TG+ RG + F + AV +AL L+G E+DG + + + + +R F
Sbjct: 75 NTGRSRGFGFVTFASPEAVDKALELNGKEIDGRSINVDKSVEKDQNQVRERRARTFGDAP 134
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
E +R+++GNLS+D TEE L ++FSD I S+ T++++G +G+ +V+F D S
Sbjct: 135 SEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAK 194
Query: 119 MALK--LDQEVVRGRPVKISCAVP 140
A + + QE+ GR +++ + P
Sbjct: 195 KAHESLVGQEIA-GRAIRLEFSQP 217
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW++ L+ F+ C +I S T++ TG RG+ V F+ ++ AL+L+
Sbjct: 41 IFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALELN 100
Query: 125 QEVVRGRPVKISCAV 139
+ + GR + + +V
Sbjct: 101 GKEIDGRSINVDKSV 115
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAK-----RTSDF 55
P+TG RG + R+ A + A+ ALDG ++DG +F+K+ + + + T+
Sbjct: 136 PETGISRGCGFVTMRSLAAARTAMNALDGFDLDGREMFVKLASHVVSNRRNPSLSHTAPM 195
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
I E +IY+GNL+W + + L++LF+ C I S R T+++ R Y + FS
Sbjct: 196 KDHIFESPYKIYVGNLAWSVQPQHLRELFTQCGNIVSTRLLTDRKGARNRVYGFLSFSSP 255
Query: 115 LSLSMALKLDQEVVRGRPVKI 135
L ALKL+ GR + +
Sbjct: 256 EELDAALKLNNTNFHGRDIIV 276
>gi|302828556|ref|XP_002945845.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
gi|300268660|gb|EFJ52840.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
Length = 220
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+++GNLSW TE+D++K F DC KI ++R G + ETG RG+AHV+F D+ A+
Sbjct: 62 RVFVGNLSWKATEDDVRKHFKDCGKIVNVRMGVDPETGRSRGFAHVEFGDAAQAKKAVSK 121
Query: 124 DQEVVRGRPVKISCAVP 140
+ GR +K+ P
Sbjct: 122 AGTEIDGRAIKVEVTQP 138
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
P+TG+ RG A + F K+A++ G+E+DG +K++ + +
Sbjct: 96 PETGRSRGFAHVEFGDAAQAKKAVSKAGTEIDGRAIKVE----------------VTQPR 139
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
+ + G D L+++F C I S+R +++E G +G+A+++F
Sbjct: 140 PQSFGGGGREDEIRSALEEVFGGCGGIKSIRLPSDREAGTLKGFAYIEF 188
>gi|308803438|ref|XP_003079032.1| Transcriptional coactivator CAPER (RRM superfamily) (ISS)
[Ostreococcus tauri]
gi|116057486|emb|CAL51913.1| Transcriptional coactivator CAPER (RRM superfamily) (ISS), partial
[Ostreococcus tauri]
Length = 157
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
TGKF G ++ F+T +A+A G ++ G + P +A K PK +G
Sbjct: 24 TGKFLGAGVVEFKTPEGAAKAVAACGRKVLG---RETPTRADVKK----MGPK-PDGCYT 75
Query: 66 IYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++GNL++ I ++ + K F D + +++R+ TNKETGEFRG DF+D SL A K
Sbjct: 76 LFMGNLNFQIDDDKIWKFFMDNAEVEPTTVRWLTNKETGEFRGVGFADFADDESLDAAAK 135
Query: 123 LDQEVVRGRPVKISCAVPPKKG 144
+ GRP+++ P +G
Sbjct: 136 CNGLPCMGRPIRLDWQAPSNRG 157
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS---DFTPKIVEG 62
T +F+GIA I F+ +V AL L G + G+ + +Q +A K + S PK+ G
Sbjct: 226 TKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMASTPPQPPPKVTSG 285
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + +TG +GY + F ++ AL
Sbjct: 286 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKAL 345
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 346 EQLNGFELAGRPMKV 360
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 191 VFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALGLS 250
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 251 GQRLLGIPISVQ 262
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS---DFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + S F PK+ G
Sbjct: 308 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKLHTG 367
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI ++ + ETG +GY + + ++ AL
Sbjct: 368 PMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKAL 427
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 428 EQLNGFELAGRPMKV 442
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 273 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 332
Query: 125 QEVVRGRPVKI 135
+ + G P+ +
Sbjct: 333 GQRLLGVPIMV 343
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE---- 61
T +F+GIA I F+ +V A+ L+G ++ G+ + +QP +A K R ++ P +V+
Sbjct: 177 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGVPIVVQPTQAEK-NRMANSMPNMVQRTHY 235
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G ++Y+G+L ++ITEE L+ +F + +++ + ETG +GY + + ++ A
Sbjct: 236 GPMKLYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKA 295
Query: 121 LK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA------------TSKVTDSAG 167
L+ L+ + GRP+K+ + + + RA K+ + G
Sbjct: 296 LEHLNGFEIAGRPMKVGHVTENHSVYDKTAFEVDELDRAGYDLGATGRLQLMYKLAEGTG 355
Query: 168 LGTSNDADNSGAVTSNVAANAGSGTSDVTEHI 199
A N+ V S V A + T VT I
Sbjct: 356 FPIPQAAANALQVASGVQAAPAAPTVQVTPPI 387
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 46 ATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFR 104
A+K S TP+ + ++ LS I DL++ FS K+ +R T +T F+
Sbjct: 123 ASKVPPASMLTPEERDA-RTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFK 181
Query: 105 GYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
G A+++F D S+ +A+ L+ + + G P+ + P + N + S+P+
Sbjct: 182 GIAYIEFKDPESVPLAMGLNGQKLLGVPIVVQ---PTQAEKNRMANSMPN 228
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + T F PK G
Sbjct: 304 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHVG 363
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L +DITEE L+ +F KI +++ + ET +GY + + ++ AL
Sbjct: 364 PMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKAL 423
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 424 EQLNGFELAGRPMKV 438
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 269 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 328
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 329 GQRLLGVPIMVQ 340
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI----VE 61
T +F+GIA + F+ +V A+ L G ++ G+ + +QP +A K ++ + P + +
Sbjct: 203 TRRFKGIAYVEFKDPESVPLAMGLTGQKLLGIPISVQPTQAEKNRQGNSTAPMMMPSDMR 262
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G R+Y+G+L ++ITE+ L+ +F KI S++ + ETG +GY + F + A
Sbjct: 263 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKA 322
Query: 121 L-KLDQEVVRGRPVKI 135
L +L+ + GRP+K+
Sbjct: 323 LEQLNGFELAGRPMKV 338
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ ++ T +T F+G A+V+F D S+ +A+ L
Sbjct: 168 VFCMQLSQRIRGRDLEEFFSSVGKVRDVKLITCNKTRRFKGIAYVEFKDPESVPLAMGLT 227
Query: 125 QEVVRGRPVKI--SCAVPPKKGINSKSRSLPSNKRATSKV 162
+ + G P+ + + A ++G ++ +PS+ R ++
Sbjct: 228 GQKLLGIPISVQPTQAEKNRQGNSTAPMMMPSDMRGPMRL 267
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEGYNRI 66
+G+ + F++E +V AL L G ++ G+ + +QP +A K A+ TS P V ++R+
Sbjct: 271 KGVGYVEFKSEESVAAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNSVP-FHRL 329
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
Y+GN+ + ITE DL+ +F E G RGY V F D+ + AL K++
Sbjct: 330 YVGNIHFSITETDLQHVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNG 389
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 390 FDLAGRPIRV 399
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS---DFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + S F PK G
Sbjct: 297 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTG 356
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 357 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 416
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 417 EQLNGFELAGRPMKV 431
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 262 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 321
Query: 125 QEVVRGRPVKI 135
+ + G P+ +
Sbjct: 322 GQRLLGVPIMV 332
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 80/142 (56%), Gaps = 26/142 (18%)
Query: 12 IAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV-----EGYN-- 64
+A I +++E + K+AL+++G + +G ++ + KIV E +N
Sbjct: 327 VAYIKYKSEESAKKALSMNGKKFEGNYVNV----------------KIVAKLGQEKHNIK 370
Query: 65 -RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
I+IGNL + + D+ + FS C +I S+R +K+TG+ RG+ +V+F ++++ALK
Sbjct: 371 KSIFIGNLKFGMNTNDIWENFSKCGEIESVRLIRDKKTGQTRGFGYVNFKSEDAVTLALK 430
Query: 123 LDQEVVRGRPVKI-SCAVPPKK 143
LD + RPV++ +C P +K
Sbjct: 431 LDGVEINNRPVRVRTCRAPSEK 452
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA I F+ +V AL L G ++ G+ + +Q +A K + + PK + G
Sbjct: 201 TRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTG 260
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F + AL
Sbjct: 261 PMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKAL 320
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 321 EQLNGFELAGRPMKV 335
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ LS I DL++ FS K+ +R +T F+G A+++F D S+++AL L
Sbjct: 166 VFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALGLS 225
Query: 125 QEVVRGRPVKISCAVPPKKGI-NSKSRSLPSN 155
+ + G P+ + K + NS +P N
Sbjct: 226 GQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKN 257
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKA----TKAKRTSDFTPKIV 60
+G+ RG I+F T AV +AL + G E+DG + + ++ T+A R + F
Sbjct: 325 SGRSRGFGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESNPRNTQA-RAAKFGDTPS 383
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E I++GN+++ E+ L + F+D + S+R T++ETG+ +G+A+V+F D +
Sbjct: 384 EPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATA 443
Query: 120 ALKLDQE--VVRGRPVKISCAVP 140
A + +E + GRPV++ + P
Sbjct: 444 AFEAGKEGLEIGGRPVRLDYSQP 466
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I + NLSW++ ++ LK F +C +I S+R ++++G RG+ +DFS S +++ AL+
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 125 Q-EVVRGRPVKI 135
Q + V GR + +
Sbjct: 350 QGKEVDGRAIAV 361
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEG 62
T +F+GIA I F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 219 TRRFKGIAYIEFKDAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPKTSNG 278
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI ++ T+ +TG+ +GY + F + A+
Sbjct: 279 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAM 338
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 339 EQLNGFELAGRPMKV 353
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I +DL++ FS K+ +R T +T F+G A+++F D+ S+ +AL L
Sbjct: 184 VFCMQLSQRIRAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDAESVPLALGLT 243
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 244 GQKLLGVPIIVQ 255
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA I F+ +V AL L G ++ G+ + +Q +A K + + PK + G
Sbjct: 180 TRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTG 239
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F + AL
Sbjct: 240 PMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKAL 299
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 300 EQLNGFELAGRPMKV 314
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ LS I DL++ FS K+ +R +T F+G A+++F D S+++AL L
Sbjct: 145 VFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALGLS 204
Query: 125 QEVVRGRPVKISCAVPPKKGI-NSKSRSLPSN 155
+ + G P+ + K + NS +P N
Sbjct: 205 GQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKN 236
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKR-------TSDF 55
P+TG RG + R+ + A+ ALDG ++DG + ++ +KR T
Sbjct: 169 PETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPPV 228
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
I E ++IY+GN++W + ++L++ FS C + S R T+++ G R Y + F+ +
Sbjct: 229 KDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASA 288
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
L ALKLD GR + + A
Sbjct: 289 EELEAALKLDNTHFHGRNILVRQA 312
>gi|255085450|ref|XP_002505156.1| predicted protein [Micromonas sp. RCC299]
gi|226520425|gb|ACO66414.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPY----------KATKAKRTSD 54
DT KF G ++ F T+ A+A G E+ G KI+ + +A +A + +
Sbjct: 62 DTKKFLGAGVVEFDTQEGANAAIAASGREVHGRETKIRGWEQRGTEASEKRAARAAQKME 121
Query: 55 FTP--KIVEGYNRIYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHV 109
P G +++GNL++ I ++ + F D ++S++R+ TNK+TGEFRG
Sbjct: 122 VKPMGPKPPGCYTLFMGNLNFAIDDDAIYNFFKDNAGVEMSAVRWLTNKDTGEFRGVGFA 181
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
DF+ L A L+ + GRP+++ P
Sbjct: 182 DFATDEDLDKAAALNGQDCMGRPIRMDWQAP 212
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+GNL+W I E +K+ F+DC + S+ + K+T +F G V+F + A+
Sbjct: 27 KVYMGNLAWSIDENAIKEAFADCGNVLSINWFEEKDTKKFLGAGVVEFDTQEGANAAIAA 86
Query: 124 DQEVVRGRPVKI 135
V GR KI
Sbjct: 87 SGREVHGRETKI 98
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS---DFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + S F PK G
Sbjct: 279 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTG 338
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI ++ + ETG +GY + + ++ AL
Sbjct: 339 PMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKAL 398
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 399 EQLNGFELAGRPMKV 413
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 244 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 303
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + G P+ + K + S
Sbjct: 304 GQRLLGVPIMVQHTQAEKNRLQS 326
>gi|398411554|ref|XP_003857115.1| hypothetical protein MYCGRDRAFT_102763 [Zymoseptoria tritici
IPO323]
gi|339477000|gb|EGP92091.1| hypothetical protein MYCGRDRAFT_102763 [Zymoseptoria tritici
IPO323]
Length = 377
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 10 RGIAIINFRTEGAVKRA-LALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR--- 65
+G A + F + A RA L+ +E +G L +Q Y K +R F+P+ EG R
Sbjct: 228 KGFAFVEFSDQEAANRAKQELNHTEFEGRRLSVQ-YHLKKDRREGGFSPR--EGGTRNKP 284
Query: 66 ---IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++IGN+S+ +++ DL LF + + + +R ++ +G+ RG+AH DF D S A
Sbjct: 285 SKTLFIGNMSYQMSDRDLNDLFKEVRNVLDVRVAIDRRSGQPRGFAHADFIDMESAKKAK 344
Query: 122 K-LDQEVVRGRPVKI 135
+ L+Q+ V GR ++I
Sbjct: 345 ELLEQKSVYGRQLRI 359
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKR-------TSDF 55
P+TG RG + R+ + A+ ALDG ++DG + ++ +KR T
Sbjct: 14 PETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPPV 73
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
I E ++IY+GN++W + ++L++ FS C + S R T+++ G R Y + F+ +
Sbjct: 74 KDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASA 133
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
L ALKLD GR + + A
Sbjct: 134 EELEAALKLDNTHFHGRNILVRQA 157
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 194 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 253
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITEE LK +F KI +++ + ETG +GY + F ++ AL
Sbjct: 254 PMRLYVGSLLFNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKAL 313
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 314 EQLNGFELAGRPMKV 328
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
R+ + TP+ + I+ LS I DL++ FS K+ +R T +T F+G A+V
Sbjct: 145 RSDELTPEERDART-IFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYV 203
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKIS 136
+F D S+++AL L + + G P+ +
Sbjct: 204 EFKDPESVTLALGLSGQKLLGVPIVVQ 230
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 15/147 (10%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGS-EMDGLFLKI----------QPYKATKAKRTSD 54
+G+ +G ++F T A K A+A +G+ E+DG + + QPY +R +
Sbjct: 300 SGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQ---QRAGN 356
Query: 55 FTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
F ++ E + +++GNLS++ TE+DL F C I S+R T+ ++G +G+ +V FSD
Sbjct: 357 FGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSD 416
Query: 114 SLSLSMALKLDQEVVRGRPVKISCAVP 140
S ++++ + GRP ++ + P
Sbjct: 417 IDSAKKCVEMNGHFIAGRPCRLDFSTP 443
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 15/147 (10%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGS-EMDGLFLKI----------QPYKATKAKRTSD 54
+G+ +G ++F T A K A+A +G+ E+DG + + QPY +R +
Sbjct: 300 SGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLPNPRPANPQPYAQ---QRAGN 356
Query: 55 FTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
F ++ E + +++GNLS++ TE+DL F C I S+R T+ ++G +G+ +V FSD
Sbjct: 357 FGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSD 416
Query: 114 SLSLSMALKLDQEVVRGRPVKISCAVP 140
S ++++ + GRP ++ + P
Sbjct: 417 IDSAKKCVEMNGHFIAGRPCRLDFSTP 443
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKR-------TSDF 55
P+TG RG + R+ + A+ ALDG ++DG + ++ +KR T
Sbjct: 14 PETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPPV 73
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
I E ++IY+GN++W + ++L++ FS C + S R T+++ G R Y + F+ +
Sbjct: 74 KDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASA 133
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
L ALKLD GR + + A
Sbjct: 134 EELEAALKLDNTHFHGRNILVRQA 157
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGS-EMDGLFLKIQ---PYKATK-----AKRTSDFT 56
+G+ +G ++F + A K A+A++G E+DG + + P A +R S+F
Sbjct: 243 SGRSKGFGYVDFDSPEAAKAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFG 302
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
K + ++IGNLS++ TE+D++ FS C +I S+R T+ +G +G+ +V F
Sbjct: 303 DKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSID 362
Query: 116 SLSMALKLDQEVVRGRPVKISCAVP 140
+ ++++ + GRP ++ + P
Sbjct: 363 AAKQCVEMNGHFIAGRPCRLDFSTP 387
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW++ +E L K F + + + R + ++G +G+ +VDF + A+ ++
Sbjct: 208 VFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAAKAAVAVN 267
Query: 125 -QEVVRGRPVKISCAVP-PKKGINSKSRSLPSN 155
Q+ + GR V + + P P + N ++ SN
Sbjct: 268 GQKEIDGRMVNLDISTPRPAQNNNGFAQQRASN 300
>gi|340959676|gb|EGS20857.1| translation initiation factor 4B-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 526
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 53/83 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T + + + F DCK+ S+R T+ E +G+A+ +F+D L AL D
Sbjct: 78 HLGNLSYEATSDAITEFFKDCKVVSVRIITDHEHNRPKGFAYAEFADVEGLKTALTRDGM 137
Query: 127 VVRGRPVKISCAVPPKKGINSKS 149
V+ GRP+++ A PP+ G ++++
Sbjct: 138 VLEGRPIRVKVADPPRGGFSNRT 160
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEG 62
T +F+GIA I FR +V AL L G + G+ + +Q +A K A PK++ G
Sbjct: 206 TKRFKGIAYIEFRDPESVALALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVG 265
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + +TG +GY + F ++ AL
Sbjct: 266 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKAL 325
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 326 EQLNGFELAGRPMKV 340
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 171 VFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRDPESVALALGLS 230
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 231 GQRLLGIPISVQ 242
>gi|325183203|emb|CCA17661.1| nucleolin putative [Albugo laibachii Nc14]
Length = 701
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR- 65
G+ G A I F + AL LDGS+ G +LKIQ +I+E
Sbjct: 473 GRPSGKARIRFSCASEAEAALELDGSDFGGRWLKIQ------------LANEILEKPENC 520
Query: 66 --IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++GNL WD + + + FS C +I R +++ETGEFRG +V+F+ + + A+K
Sbjct: 521 TTAFVGNLPWDADDNSVCEFFSQCGEIGECRLLSDRETGEFRGIGYVEFTSTEAADEAIK 580
Query: 123 LDQEVVRGRPVKISCA 138
L+ GR ++I+ A
Sbjct: 581 LNGADFNGRSLRINYA 596
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEGYNRI 66
+G+ + F+TE +V AL L G ++ G+ + +QP +A K K S T + ++R+
Sbjct: 216 KGVGYVEFKTEESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRL 275
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
Y+GN+ + ITE+DL+ +F L F ++G RGY V F D+ AL K+
Sbjct: 276 YVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 124 DQEVVRGRPVKI 135
+ + GRP+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|384496091|gb|EIE86582.1| hypothetical protein RO3G_11293 [Rhizopus delemar RA 99-880]
Length = 304
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+I +LS+D E+DL LFS+ K++++R ++ T +G+A+V+F D SL AL+L E
Sbjct: 108 HIASLSFDANEDDLANLFSNLKVANIRLLRDRNTERSKGFAYVEFEDLDSLKGALELSGE 167
Query: 127 VVRGRPVKISCAVPPKKG 144
+ GR ++IS A PP++G
Sbjct: 168 SIYGRAIRISVAEPPREG 185
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEG 62
T +F+GIA I FR +V AL L G + G+ + +Q +A K A PK++ G
Sbjct: 228 TKRFKGIAYIEFRDPESVALALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVG 287
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + +TG +GY + F ++ AL
Sbjct: 288 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKAL 347
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 348 EQLNGFELAGRPMKV 362
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 193 VFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRDPESVALALGLS 252
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 253 GQRLLGIPISVQ 264
>gi|451847139|gb|EMD60447.1| hypothetical protein COCSADRAFT_40088 [Cochliobolus sativus ND90Pr]
Length = 445
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 20/130 (15%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN----- 64
+G A ++F TE A+ A+AL ++MDG L I+ K+ + + PK EG +
Sbjct: 184 KGFAYVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDK---PKTEEGQDSRRAG 240
Query: 65 -----------RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
R++IGNLS+D+T+EDL++ ++ C I + T +++G+ +GYA + F+
Sbjct: 241 NTDKSGHPPNKRVFIGNLSFDVTKEDLQEHYAQCGDIEDIHMATFEDSGKCKGYAWITFA 300
Query: 113 DSLSLSMALK 122
D S + A+K
Sbjct: 301 DVESATWAVK 310
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEGYNRI 66
+G+ + F+TE +V AL L G ++ G+ + +QP +A K K S T + ++R+
Sbjct: 216 KGVGYVEFKTEESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRL 275
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
Y+GN+ + ITE+DL+ +F L F ++G RGY V F D+ AL K+
Sbjct: 276 YVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 124 DQEVVRGRPVKI 135
+ + GRP+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A I + +V +AL L G+ LFL+ K + R+ K + I+IGNL
Sbjct: 237 AYIVYELPESVSKALELHGT----LFLE----KHLRVDRSETTQQKKYDHKKSIFIGNLL 288
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+DI+EE L FSDC I+++R ++ T +G+ +V F++ S+S+ALKL+ ++GR
Sbjct: 289 FDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFAERSSVSLALKLNDTDLQGR 348
Query: 132 PVKISCAVP 140
V+IS + P
Sbjct: 349 QVRISRSNP 357
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + + F PK G
Sbjct: 292 TKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG 351
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI ++ + ETG +GY + + ++ AL
Sbjct: 352 PMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKAL 411
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 412 EQLNGFELAGRPMKV 426
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+S+AL L
Sbjct: 257 VFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFEDPESVSLALGLS 316
Query: 125 QEVVRGRPVKI 135
+ + G P+ +
Sbjct: 317 GQRLLGVPIMV 327
>gi|326472886|gb|EGD96895.1| translation initiation factor 4B [Trichophyton tonsurans CBS
112818]
Length = 540
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 98 HIGNLSFDATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 157
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDAD 175
++GR +++S A PPK + + S LP +R V+D G G + + D
Sbjct: 158 SLQGRNIRVSIAEPPKDRHDGRDLSDWTRKGPLPDLPGQRR----VSDRPGFGGARNFD 212
>gi|327300000|ref|XP_003234693.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
gi|326463587|gb|EGD89040.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
Length = 547
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 86 HIGNLSFDATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 145
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDAD 175
++GR +++S A PPK + + S LP +R V+D G G + + D
Sbjct: 146 SLQGRNIRVSIAEPPKDRHDGRDLSDWTRKGPLPDLPGQRR----VSDRPGFGGARNFD 200
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVEGYNRI 66
+G+ + F+TE +V AL L G ++ G+ + +QP +A K K S T + ++R+
Sbjct: 216 KGVGYVEFKTEESVAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPFHRL 275
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
Y+GN+ + ITE+DL+ +F L F ++G RGY V F D+ AL K+
Sbjct: 276 YVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 124 DQEVVRGRPVKI 135
+ + GRP+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T A ALALDGS + +GL L + K + R D I EG I++
Sbjct: 945 RRFCYLQFKTSVAAHSALALDGSAVGNGLHLVV---KISDPSRKQDRNGPIYEG-REIHV 1000
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
N++W +E+DLK+LFS RFGT K G +G+ +V FS + AL
Sbjct: 1001 SNVNWSASEDDLKELFS-------RFGTVELVRLPRKVDGGSKGFGYVVFSSKEEATAAL 1053
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ RGRP+ + + P
Sbjct: 1054 AMHEQEFRGRPLHVKVSAP 1072
>gi|326480206|gb|EGE04216.1| translation initiation factor 4B [Trichophyton equinum CBS 127.97]
Length = 551
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 86 HIGNLSFDATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 145
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDAD 175
++GR +++S A PPK + + S LP +R V+D G G + + D
Sbjct: 146 SLQGRNIRVSIAEPPKDRHDGRDLSDWTRKGPLPDLPGQRR----VSDRPGFGGARNFD 200
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T A ALALDGS + +GL L + K + R D I EG I++
Sbjct: 944 RRFCYLQFKTSVAAHSALALDGSAVGNGLHLVV---KISDPSRKQDRNGPIYEG-REIHV 999
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
N++W +E+DLK+LFS RFGT K G +G+ +V FS + AL
Sbjct: 1000 SNVNWSASEDDLKELFS-------RFGTVELVRLPRKVDGGSKGFGYVVFSSKEEATAAL 1052
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ RGRP+ + + P
Sbjct: 1053 AMHEQEFRGRPLHVKVSAP 1071
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ----PYK-ATKAKRTSDFTPKIV 60
TG+ RG ++F T AV++A+ L+G E+DG + + P K A++ KR F
Sbjct: 370 TGRSRGFGYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTS 429
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+++GNLS+ + ++ L + FS+ ++ ++R T++E+G +G+ +V+FSD +
Sbjct: 430 PPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKK 489
Query: 120 ALKLDQEV-VRGRPVKISCAVP 140
A Q V + GR V++ + P
Sbjct: 490 AHAAMQGVELDGRSVRLDFSQP 511
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 42 QPYKATKAKRTSDFTP----KIVEG--------YNRIYIGNLSWDITEEDLKKLFSDC-K 88
+P K + T D P KI G I++G LSW++ + L K F++C +
Sbjct: 299 EPPKGKRKADTQDAVPAKKVKIANGDAMDVDNEIKSIFVGRLSWNVDNDWLAKEFAECGE 358
Query: 89 ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+ S ++ TG RG+ +V FS S ++ A++L+ + + GR V + + PP K + +
Sbjct: 359 VVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPPNKDASRE 418
Query: 149 SRS 151
R+
Sbjct: 419 KRA 421
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F+ +V AL L G ++ G+ + +Q +A K + S PK G
Sbjct: 208 TKRFKGIAYIEFKDPESVALALGLSGQKLLGIPISVQHTQAEKNRMASQPPVAPPKNPSG 267
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L +F KI +++ + +TG +GY + F ++ AL
Sbjct: 268 PMRLYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKAL 327
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 328 EQLNGFELAGRPMKV 342
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 173 VFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALGLS 232
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 233 GQKLLGIPISVQ 244
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 208 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 267
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 268 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 327
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 328 EQLNGFELAGRPMKV 342
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL+ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 173 VFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 232
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 233 GQKLLGVPIVVQ 244
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 207 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 266
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 267 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 326
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 327 EQLNGFELAGRPMKV 341
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 172 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 231
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 232 GQKLLGVPIVVQ 243
>gi|296815986|ref|XP_002848330.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
gi|238841355|gb|EEQ31017.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
Length = 545
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 14/113 (12%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 95 HIGNLSFEATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 154
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLG 169
++GR +++S A PPK ++ S LP +R V+D AG G
Sbjct: 155 SLQGRNIRVSIAEPPKDRHEARDLSDWTRKGPLPELPGQRR----VSDRAGFG 203
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 210 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 269
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 270 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 329
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 330 EQLNGFELAGRPMKV 344
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
R + TP+ + ++ LS I DL++ FS K+ +R T +T F+G A+V
Sbjct: 161 RNDELTPEERDART-VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYV 219
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKIS 136
+F D S+++AL L + + G P+ +
Sbjct: 220 EFKDPESVTLALGLSGQKLLGVPIVVQ 246
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 184 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 243
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 244 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 303
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 304 EQLNGFELAGRPMKV 318
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
R + TP+ + ++ LS I DL++ FS K+ +R T +T F+G A+V
Sbjct: 135 RNDELTPEERDART-VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYV 193
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKIS 136
+F D S+++AL L + + G P+ +
Sbjct: 194 EFKDPESVTLALGLSGQKLLGVPIVVQ 220
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 185 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 244
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 245 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 304
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 305 EQLNGFELAGRPMKV 319
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL+ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 150 VFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 209
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 210 GQKLLGVPIVVQ 221
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 206 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 265
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 266 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 325
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 326 EQLNGFELAGRPMKV 340
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 171 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 230
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 231 GQKLLGVPIVVQ 242
>gi|302497047|ref|XP_003010524.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
gi|291174067|gb|EFE29884.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 10 HIGNLSFDATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 69
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDAD 175
++GR +++S A PPK + + S LP +R V+D G G + + D
Sbjct: 70 SLQGRNIRVSIAEPPKDRHDGRDLSDWTRKGPLPDLPGQRR----VSDRPGFGGARNFD 124
>gi|451997934|gb|EMD90399.1| hypothetical protein COCHEDRAFT_1106955 [Cochliobolus
heterostrophus C5]
Length = 446
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 20/130 (15%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN----- 64
+G A ++F TE A+ A+AL ++MDG L I+ K+ + + PK EG +
Sbjct: 178 KGFAYVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDK---PKTEEGQDNRRAG 234
Query: 65 -----------RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
R++IGNLS+D+T++DL++ ++ C I + T +++G+ +GYA + F+
Sbjct: 235 NADKSGHPPNKRVFIGNLSFDVTKQDLQEHYAQCGDIEDIHMATFEDSGKCKGYAWITFA 294
Query: 113 DSLSLSMALK 122
D S + A+K
Sbjct: 295 DVESATWAVK 304
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 198 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 257
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 258 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 317
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 318 EQLNGFELAGRPMKV 332
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 163 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 222
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 223 GQKLLGVPIVVQ 234
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 186 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 245
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 305
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 306 EQLNGFELAGRPMKV 320
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 151 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 210
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 211 GQKLLGVPIVVQ 222
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 186 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 245
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 246 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 305
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 306 EQLNGFELAGRPMKV 320
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 151 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 210
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 211 GQKLLGVPIVVQ 222
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 84/154 (54%), Gaps = 27/154 (17%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T +TG+ +G + F + A+ A+AL G+E+DG +++ TPK
Sbjct: 215 ITDKETGRAKGFGYVTFESADALTAAMALTGTELDGREIRVDVS-----------TPKPP 263
Query: 61 EGYNR--------------IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRG 105
NR +++GNLS+++TE+++++ FS ++ S+RF T+++TG F+G
Sbjct: 264 RDGNRQGRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKG 323
Query: 106 YAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCA 138
+ +V++ D + A++ L+ + GR +++ A
Sbjct: 324 FGYVEYGDVETAQKAVEGLNGVEIAGRSLRLDYA 357
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 57 PKIVEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF--S 112
PK E N +++GNLSW++ EE L F+DC + S R T+KETG +G+ +V F +
Sbjct: 175 PKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESA 234
Query: 113 DSLSLSMAL---KLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS 160
D+L+ +MAL +LD +R V +S PP+ G + P + T+
Sbjct: 235 DALTAAMALTGTELDGREIR---VDVSTPKPPRDGNRQGRKEAPQSAPTTT 282
>gi|323454673|gb|EGB10543.1| hypothetical protein AURANDRAFT_17857, partial [Aureococcus
anophagefferens]
Length = 73
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I+IGNLSW +TE++++ F+ C +IS++RF T++ETG+FRG+ HVDF + + A+ L
Sbjct: 2 IFIGNLSWTVTEDEVRATFAPCGEISNIRFATDRETGDFRGFGHVDFDSAEAAEAAVALA 61
Query: 125 QEVVRGRPVKI 135
V GRP+++
Sbjct: 62 GTPVGGRPIRV 72
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 48 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 107
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F ++ AL
Sbjct: 108 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKAL 167
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 168 EQLNGFELAGRPMKV 182
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+V+F D S+++AL L
Sbjct: 13 VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLS 72
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 73 GQKLLGVPIVVQ 84
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F++E AV++AL L G ++ G+ + +Q +A K + R D T P +
Sbjct: 221 SGRSKGVGYVEFKSEDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNSI 280
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ +++TE+DL+ +F L F + G RGY V F D+
Sbjct: 281 P-FHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAR 337
Query: 119 MAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 338 EALEKMNGFDLAGRPIRVGL 357
>gi|393909222|gb|EJD75365.1| Sart3 protein [Loa loa]
Length = 879
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 9 FRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
RGI + F TE + AL +D +++DG + + YK + ++F N++++
Sbjct: 660 LRGIWLYRFLTEQEAREALKMDRTQIDGRPMYVSEYKPHDKGKNTEFRYSTSLERNKVFV 719
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE- 126
N+ +D TEE LK++F+ + +R T+K +G+ +G A+V+F + ++A+K ++
Sbjct: 720 NNVHYDATEEQLKEIFATFGAVRDVRIVTHK-SGKSKGCAYVEFENDDDAAVAVKASEDL 778
Query: 127 VVRGRPVKISCAVPPKK-------GINSKSRS--------LPSNKRATSKVTDSAGLGTS 171
++ R + ++ + PPK+ N+ S S +P T+K+ SAG S
Sbjct: 779 ILLERKLSVAISNPPKRKEQLQRLSFNTTSFSHQRSKIDLIPRTLARTTKLARSAGDNRS 838
Query: 172 ND 173
N+
Sbjct: 839 NE 840
>gi|256087575|ref|XP_002579942.1| eukaryotic translation initiation factor 4h [Schistosoma mansoni]
gi|353232524|emb|CCD79879.1| putative eukaryotic translation initiation factor 4h [Schistosoma
mansoni]
Length = 242
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+Y+GNL + + +FS C I S+R +K+T EF+GYA+VDF + SL AL +D
Sbjct: 10 VYVGNLPPNTIQGHFDYIFSGCDIESVRLVRDKQTDEFKGYAYVDFKNEQSLQKALTVDG 69
Query: 126 EVVRGRPVKISCA 138
+V GR ++++ A
Sbjct: 70 AIVDGRSLRVNLA 82
>gi|328855457|gb|EGG04583.1| hypothetical protein MELLADRAFT_117005 [Melampsora larici-populina
98AG31]
Length = 667
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLSW+++ DL++ F I+S+R T+ TG+ +GY +++FS +L AL
Sbjct: 95 FVGNLSWEVSNADLEQFFGVTHITSIRMLTDSATGKPKGYGYIEFSKREALVEALDKSGR 154
Query: 127 VVRGRPVKISCAVPPKK 143
V GR +++S A PPK+
Sbjct: 155 EVGGRVIRVSVAEPPKE 171
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI------QPYKATKAKRTSDFTPK 58
D+ K RG + F A +A+ DGSE+DG +++ +P +A + KR F K
Sbjct: 230 DSQKSRGFGYVEFADLEASAKAIEKDGSEIDGRAIRVNYATQRKPNEAAE-KRAKVFNDK 288
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++IG+LS+ +TE+ + + F + S+R T+++TG +G+ +V FS
Sbjct: 289 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDA 348
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKK 143
S ALK ++ + GR +++ A PPK+
Sbjct: 349 SAALKAMNGAEIAGRAIRVDFA-PPKQ 374
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E +++G LSW++ + LK F C ++ S R ++++ + RG+ +V+F+D + +
Sbjct: 191 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAK 250
Query: 120 ALKLDQEVVRGRPVKISCA 138
A++ D + GR ++++ A
Sbjct: 251 AIEKDGSEIDGRAIRVNYA 269
>gi|256087579|ref|XP_002579944.1| eukaryotic translation initiation factor 4h [Schistosoma mansoni]
gi|353232523|emb|CCD79878.1| putative eukaryotic translation initiation factor 4h [Schistosoma
mansoni]
Length = 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+Y+GNL + + +FS C I S+R +K+T EF+GYA+VDF + SL AL +D
Sbjct: 10 VYVGNLPPNTIQGHFDYIFSGCDIESVRLVRDKQTDEFKGYAYVDFKNEQSLQKALTVDG 69
Query: 126 EVVRGRPVKISCA 138
+V GR ++++ A
Sbjct: 70 AIVDGRSLRVNLA 82
>gi|256087577|ref|XP_002579943.1| eukaryotic translation initiation factor 4h [Schistosoma mansoni]
gi|353232525|emb|CCD79880.1| putative eukaryotic translation initiation factor 4h [Schistosoma
mansoni]
Length = 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+Y+GNL + + +FS C I S+R +K+T EF+GYA+VDF + SL AL +D
Sbjct: 10 VYVGNLPPNTIQGHFDYIFSGCDIESVRLVRDKQTDEFKGYAYVDFKNEQSLQKALTVDG 69
Query: 126 EVVRGRPVKISCA 138
+V GR ++++ A
Sbjct: 70 AIVDGRSLRVNLA 82
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 9/133 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDF-TPKIVEGYNRIYI 68
+GIA + F+ E +V AL+ G ++ G+ + IQP A K + + K EG ++Y+
Sbjct: 195 KGIAYVEFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKNRLAAAAENLKKAEGPKKLYV 254
Query: 69 GNLSWDITEEDLKKLFSDC----KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
G+L ++ITE+ L+ +FS ++S +R + T RGYA V+F DS S A+ L
Sbjct: 255 GSLHYNITEDMLQGIFSPFGNVERVSIMR---DTATNVSRGYAFVEFRDSDSAERAMANL 311
Query: 124 DQEVVRGRPVKIS 136
+ + GRP+K++
Sbjct: 312 NGFELAGRPMKVN 324
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F T A + A+A+ G E + + A S+ ++ G I++GNL+
Sbjct: 207 AFVRFETNEAAQAAVAMTGCEFQ------ENHIAVSLLSDSNIKKQLSLG---IFVGNLT 257
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+D+T+E L F +C KIS +R ++ G +G+ +V+F + S+ +ALKLDQ ++ R
Sbjct: 258 FDVTDEALWLHFGECGKISDVRIIRDRVNGMGKGFGYVNFESADSVELALKLDQSLLNDR 317
Query: 132 PVKIS-CAVPPK 142
P+++S C PK
Sbjct: 318 PIRVSRCKKNPK 329
>gi|380477345|emb|CCF44211.1| translation initiation factor 4B [Colletotrichum higginsianum]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TEE + + F C I S+R ++E +G+A+ +F D L AL LD +
Sbjct: 104 HLGNLSYDATEETVNEFFEGCDIVSVRIIEDREQQRPKGFAYAEFKDLEGLKQALTLDGQ 163
Query: 127 VVRGRPVKISCAVPPKKG 144
+GR ++I A PP+ G
Sbjct: 164 TFQGRAIRIKIADPPRSG 181
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI------ 59
T +F+G+ + F +V A+AL G + G+ + +QP +A K + P +
Sbjct: 46 TRRFKGLCYVEFAEPESVPLAIALTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKG 105
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
G R+Y+G+L ++ITE+ L+ +F KI ++ + ETG +GY + F ++
Sbjct: 106 PNGPMRLYVGSLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAK 165
Query: 119 MAL-KLDQEVVRGRPVKIS 136
A+ +L+ + GRP+KI+
Sbjct: 166 KAMEQLNGFELAGRPMKIN 184
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI------QPYKATKAKRTSDFTPK 58
D+ K RG + F G+ +A+ DGSE+DG +++ +P +A + KR F K
Sbjct: 232 DSQKSRGFGYVEFADLGSSAKAIEKDGSEIDGRAIRVNYATQRKPNEAAE-KRARVFNDK 290
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++IG+LS+ +TE+ + + F + S+R T+++TG +G+ +V FS
Sbjct: 291 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKK 143
+ ALK ++ + GR +++ A PPK+
Sbjct: 351 TAALKAMNGAEIAGRAIRVDFA-PPKQ 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E +++G LSW++ + LK F C ++ S R ++++ + RG+ +V+F+D S +
Sbjct: 193 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAK 252
Query: 120 ALKLDQEVVRGRPVKISCA 138
A++ D + GR ++++ A
Sbjct: 253 AIEKDGSEIDGRAIRVNYA 271
>gi|310789593|gb|EFQ25126.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 570
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TEE + + F C I S+R ++E +G+A+ +F D L AL LD +
Sbjct: 94 HLGNLSYDATEETVNEFFEGCDIVSVRIIEDREQQRPKGFAYAEFKDLEGLKQALTLDGQ 153
Query: 127 VVRGRPVKISCAVPPKKG 144
+GR ++I A PP+ G
Sbjct: 154 TFQGRAIRIKIADPPRGG 171
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E A K L+G +MDG L K P + + DF P
Sbjct: 91 ETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSC- 149
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
R+Y+GNL WD+ L++LFS+ K+ S R +++ETG RG+ V S ++
Sbjct: 150 ----RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205
Query: 120 AL-KLDQEVVRGRPVKISCA 138
A+ LD + + GR V+++ A
Sbjct: 206 AIAALDGQTLDGRAVRVNVA 225
>gi|403346976|gb|EJY72898.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 310
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
+ D+G+ RG A + ++ AV +ALA+ G + G +L I+ + ++ + D +I E
Sbjct: 118 YQDSGRCRGYAHVTLNSQKAVDKALAMTGQSIKGRYLDIKEAEGQRSSLSKDQVRQIAES 177
Query: 63 Y----NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++ L ++ E+D+ F +I S+R N +T +F+G+A++ F + S
Sbjct: 178 MPDDCKTLFVKGLPYEFREDDIGDRFRKFGEIKSIRLSYNWQTKQFKGFAYLTFGNHQSA 237
Query: 118 SMA-LKLDQEVVRGRPVKISCAV--PPKKG 144
A L+++ + V+GR +K+ V PK+G
Sbjct: 238 KKALLEMNGKEVKGRQIKVDYDVVQEPKQG 267
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCK--ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++I + ++ E+++ + F++ K I ++ +++G RGYAHV + ++ AL
Sbjct: 84 QVFISGIPYECNEDEITEFFNEIKANIVEIKLPRYQDSGRCRGYAHVTLNSQKAVDKALA 143
Query: 123 LDQEVVRGRPVKISCA 138
+ + ++GR + I A
Sbjct: 144 MTGQSIKGRYLDIKEA 159
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G+ +G A + F E V+ ALA+D +M+G + I P KAK + F + +
Sbjct: 638 GRSKGYAYVEFNNESTVQAALAMDREKMEGRPMFISPC-VDKAKNPTTFKFPTSLDKHTL 696
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA-LKLD 124
++ NL +D E ++++LFS + +R TN+ G+ +GY +V++ S S A L LD
Sbjct: 697 FVSNLPFDAKESEIEELFSKHGVVKQVRLVTNR-AGKPKGYGYVEYEQESSASTAVLTLD 755
Query: 125 QEVVRGRPVKISCAVPPKK 143
+ V+GR + ++ + PP +
Sbjct: 756 KTEVKGRTISVALSNPPTR 774
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+++I NL + ITE+ L+ FS ++ +R N G +GYA+V+F++ ++ AL +
Sbjct: 602 KVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNM-AGRSKGYAYVEFNNESTVQAALAM 660
Query: 124 DQEVVRGRPVKISCAV 139
D+E + GRP+ IS V
Sbjct: 661 DREKMEGRPMFISPCV 676
>gi|118372171|ref|XP_001019282.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|89301049|gb|EAR99037.1| nucleolar phosphoprotein [Tetrahymena thermophila SB210]
Length = 320
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDG--LFL-KIQPYKATKAKRTSDFTPKIVEGYNRI 66
+G+A ++F TE +A+ L SE G +F+ K +P A+ +D K I
Sbjct: 183 KGVAFVSFETEEGCNKAVELSDSEFMGRQIFIEKTKPKIERPAQLPADQDSKT------I 236
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++GNLS+ +E LKK F+ C K+ + R + G+ RG+ HV+F + + ALK+
Sbjct: 237 FVGNLSFVTNKETLKKFFASCGKVVNARIA--EAEGKSRGFGHVEFEERSGVENALKMAG 294
Query: 126 EVVRGRPVKISCA 138
E + GRP+++ A
Sbjct: 295 EQIDGRPIRVDVA 307
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKA-----TKAKRTSDFTPKIV- 60
G+ +GIA ++F TE +AL ++ SE G +L I+ K+ T+ +D PKIV
Sbjct: 70 GRSKGIAFVSFETEEGYNKALEMNNSEFMGRYLIIEKTKSKAERLTQMHSYADQGPKIVI 129
Query: 61 ---------EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK-ETGEFRGYAHVD 110
+ N + + LS+D E D+ ++ S R K E G +G A V
Sbjct: 130 VDNISSKINKFDNEVIVKGLSFDADENDIGNYLNENCGSVTRVNLLKNEQGCSKGVAFVS 189
Query: 111 FSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
F + A++L GR + I P
Sbjct: 190 FETEEGCNKAVELSDSEFMGRQIFIEKTKP 219
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + T F PK G
Sbjct: 288 TKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTG 347
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 348 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 407
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 408 EQLNGFELAGRLMKV 422
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 253 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLS 312
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 313 GQRLLGVPIMVQ 324
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F+ E +V++A+ L G ++ G+ + Q +A K + RT++ T G
Sbjct: 273 SGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPIIAQLTEAEKNRQARTTEGTATQSNGV 332
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE DLK +F L F +E G +GY V F D
Sbjct: 333 PFHRLYVGNIHFSITEADLKNVFE--PFGELEFAQLQKEENGRSKGYGFVQFIDPAQAKE 390
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 391 ALEKMNGFELAGRPIRV 407
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-------------AKR 51
++GK +G A ++F E + ++A+ +G + +G L++ Y K K
Sbjct: 330 ESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRVN-YSFPKNDNAHSGKGKGGKGKG 388
Query: 52 TSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
++ E +++GNL W +T+E L ++F DC I+ T++ETG RG+A++D
Sbjct: 389 KGKGHHELGEKSASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYID 448
Query: 111 FSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
F S A KL + GR ++++ P
Sbjct: 449 FDTEDSAEKATKLSGTDLEGRQIRVNYNQP 478
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
VE +++GNL + +T+E L+++FS C I + T+ E+G+ +G+A +DF+D S
Sbjct: 290 VERSKSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAE 349
Query: 119 MALKLDQEVVRGRPVKISCAVP 140
A+ + E GR ++++ + P
Sbjct: 350 KAVGKNGEDCEGRDLRVNYSFP 371
>gi|403176775|ref|XP_003335391.2| hypothetical protein PGTG_17244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172391|gb|EFP90972.2| hypothetical protein PGTG_17244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 645
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
YN ++GNLSW++ +L++ F I S+R T+ TG+ +GY +V+F D +L A
Sbjct: 94 YN-AFVGNLSWEVGSTELEEFFGASHIISIRLITDGATGKPKGYGYVEFDDRDALVAATD 152
Query: 123 LDQEVVRGRPVKISCAVPPKK 143
+ GRPV+IS A PPK+
Sbjct: 153 KSGRELGGRPVRISVAEPPKE 173
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F E +V++AL L G ++ + + +Q +A K + RTS+ P G
Sbjct: 249 SGRSKGVGYVEFADEESVQKALELTGQKLMNIPIIVQLTEAEKNRQARTSEGQPTQSNGI 308
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + I E DL+ +F L F ++TG +GY V F+ S +
Sbjct: 309 PFHRLYVGNIHFSIEESDLRDVFE--PFGELEFVQLQKEDTGRSKGYGFVQFAKSDEAKI 366
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ V GRP+++
Sbjct: 367 ALEKMNGFEVAGRPIRV 383
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E A K L+G +MDG L K P + + DF P
Sbjct: 84 ETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSC- 142
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
R+Y+GNL WD+ L++LFS+ K+ S R +++ETG RG+ V S ++
Sbjct: 143 ----RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 198
Query: 120 AL-KLDQEVVRGRPVKISCA 138
A+ LD + + GR V+++ A
Sbjct: 199 AIAALDGQTLDGRAVRVNVA 218
>gi|85081737|ref|XP_956776.1| hypothetical protein NCU00457 [Neurospora crassa OR74A]
gi|28917853|gb|EAA27540.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 559
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T E + + F C + ++R ++ET +G+A+ +F D L AL D E
Sbjct: 84 HLGNLSYNATAESVTEFFEGCDVVNVRIIEDRETQRPKGFAYAEFKDVEGLKTALTRDGE 143
Query: 127 VVRGRPVKISCAVPPKKGINSK---SRSLPSNKR 157
GR ++I A PPK+G + + SR LP+ +R
Sbjct: 144 TFDGRSIRIKIADPPKQGYSDRGESSRDLPTWER 177
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAK------RTSDF 55
+TG RG + R+ + A+ ALDG ++DG +F+K+ + + T
Sbjct: 164 ETGISRGCGFVTMRSLAEARTAINALDGFDLDGREMFVKLAAHVIASRRNPGGLSHTPPM 223
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
I E +IY+GNL+W + + L++ F+ C + S R T+++ G R Y + FS +
Sbjct: 224 KDHIFESRYKIYVGNLAWSVQPQHLREHFTKCGTVVSTRLLTDRKGGRSRVYGFLSFSSA 283
Query: 115 LSLSMALKLDQEVVRGRPVKI 135
L AL+L+ GR + +
Sbjct: 284 EELEAALQLNNTEFHGRDIIV 304
>gi|154276056|ref|XP_001538873.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413946|gb|EDN09311.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 538
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF+DC+++++R +K T +G+ +V+F+ L AL
Sbjct: 60 HIGNLSFEATQADISDLFADCEVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALSFQGT 119
Query: 127 VVRGRPVKISCAVPPKKGINSK-----SRSLP-SNKRATSKVTDSAGLG 169
+++GR +++S A PPK+ +++ SR P + + +V+D AG G
Sbjct: 120 LLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDAPSQRRVSDRAGFG 168
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + T F PK G
Sbjct: 276 TKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTG 335
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 336 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 395
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 396 EQLNGFELAGRLMKV 410
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 241 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLS 300
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 301 GQRLLGVPIMVQ 312
>gi|159476702|ref|XP_001696450.1| hypothetical protein CHLREDRAFT_51996 [Chlamydomonas reinhardtii]
gi|158282675|gb|EDP08427.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GNLSW +E+D+KK F DC KI S+R G + TG +GYAHVDF + A
Sbjct: 3 VFVGNLSWSASEDDIKKHFKDCGKIVSVRIGMDAATGRSKGYAHVDFESADQAQKATSKA 62
Query: 125 QEVVRGRPVKISCA 138
+ GR +K+ A
Sbjct: 63 GSELGGRNIKVEVA 76
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 1 MTFPDTGK-FRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKA----KRTSD 54
++ P +GK +G A I F T ++A+ L+ + DG LK+ +A K+T D
Sbjct: 215 VSIPMSGKRMKGYAFIKFSTRAEAEKAVKKLNDFDFDGRQLKVNFSSGKEAEKREKKTGD 274
Query: 55 FTPKIVEGYNR--IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
+ E ++IGNLS+ E++++KL DC +I +R E G+ +G+AHV+F
Sbjct: 275 ENGEKKEQTKSSTVFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALG-EDGKMKGFAHVEF 333
Query: 112 SDSLSLSMALKLDQEVVRGRPVKISCA 138
D+ S A+K + + GR +K+ +
Sbjct: 334 EDAESAEKAMKFNGADLDGRNIKVDIS 360
>gi|336470007|gb|EGO58169.1| hypothetical protein NEUTE1DRAFT_82438 [Neurospora tetrasperma FGSC
2508]
gi|350290304|gb|EGZ71518.1| hypothetical protein NEUTE2DRAFT_88791 [Neurospora tetrasperma FGSC
2509]
Length = 562
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T E + + F C + ++R ++ET +G+A+ +F D L AL D E
Sbjct: 84 HLGNLSYNATAESVTEFFEGCDVVNVRIIEDRETQRPKGFAYAEFKDVEGLKTALTRDGE 143
Query: 127 VVRGRPVKISCAVPPKKGINSK---SRSLPSNKR 157
GR ++I A PPK+G + + SR LP+ +R
Sbjct: 144 TFDGRSIRIKIADPPKQGYSDRAESSRDLPTWER 177
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA------KRTSDFT 56
+ D+GK RG A + F E A+++AL LDG + +L I+ +A +A ++T + T
Sbjct: 96 YQDSGKPRGYAHVVFDDEAALEKALELDGQYLFNRYLSIRRAEAPRAVEMALKEKTQNAT 155
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
K V+G +YI L +++ E+ +++ + C I+S+R T + +G+ +V+FS
Sbjct: 156 KKAVKGCRTVYIKQLPYEVEEDTIRQALASCGTITSVRLPIWNHTKKLKGFGYVEFS 212
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+ + + +E D+ FS C + +R +++G+ RGYAHV F D +L AL+LD
Sbjct: 64 VYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALEKALELD 123
Query: 125 QEVVRGRPVKISCAVPPK 142
+ + R + I A P+
Sbjct: 124 GQYLFNRYLSIRRAEAPR 141
>gi|315042389|ref|XP_003170571.1| eukaryotic translation initiation factor 4H [Arthroderma gypseum
CBS 118893]
gi|311345605|gb|EFR04808.1| eukaryotic translation initiation factor 4H [Arthroderma gypseum
CBS 118893]
Length = 549
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 52/76 (68%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 89 HIGNLSFEATQADIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 148
Query: 127 VVRGRPVKISCAVPPK 142
++GR +++S A PPK
Sbjct: 149 SLQGRNIRVSIAEPPK 164
>gi|402086166|gb|EJT81064.1| translation initiation factor 4B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T+E + F++C+I S+R ++E G +G+ +V+F+ + L AL LD
Sbjct: 54 HLGNLSYDATQEIVSDFFAECEIVSVRIVEDREQGRPKGFGYVEFASADGLKQALTLDGA 113
Query: 127 VVRGRPVKISCAVPPK 142
+GR +++ A PPK
Sbjct: 114 SFQGRSIRVRIADPPK 129
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F+ E +V++A+AL G ++ G+ + Q +A K + R ++ T G
Sbjct: 258 SGRSKGVGYVEFKEEESVQKAIALTGQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGI 317
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE+DLK +F L F +E G +GY V F D
Sbjct: 318 PFHRLYVGNIHFSITEDDLKNVFE--PFGELEFVQLQKEEAGRSKGYGFVQFIDPTQAKE 375
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 376 ALEKMNGFELAGRPIRV 392
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F + +V A+ L G ++ G+ + +Q +A K A ++ K G R+Y
Sbjct: 195 KGIAYVEFVDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAAMANNLQKGTAGPMRLY 254
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 255 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 314
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 315 FELAGRPMKV 324
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---TSDFTPKIVEG 62
T +F+GIA + F+ +V AL L G ++ G+ + +Q +A K + + PK G
Sbjct: 184 TRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTG 243
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + TG +GY + F ++ AL
Sbjct: 244 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKAL 303
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 304 EQLNGFELAGRPMKV 318
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
R + TP+ + ++ LS I DL++ FS K+ +R T +T F+G A+V
Sbjct: 135 RNDELTPEERDART-VFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYV 193
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKIS 136
+F D S+++AL L + + G P+ +
Sbjct: 194 EFKDPESVTLALGLSGQKLLGVPIVVQ 220
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F + +V A+ L G ++ G+ + +Q +A K A ++ K G R+Y
Sbjct: 193 KGIAYVEFLDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAALANNLQKGTAGPMRLY 252
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 253 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 312
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 313 FELAGRPMKV 322
>gi|240278534|gb|EER42040.1| translation initiation factor 4B [Ajellomyces capsulatus H143]
Length = 528
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF+DC+++++R +K T +G+ +V+F+ L AL
Sbjct: 47 HIGNLSFEATQADISDLFADCEVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALSFQGT 106
Query: 127 VVRGRPVKISCAVPPKKGINSK-----SRSLP-SNKRATSKVTDSAGLG 169
++GR +++S A PPK+ +++ SR P + + +V+D AG G
Sbjct: 107 FLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDAPSQRRVSDRAGFG 155
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + + F PK G
Sbjct: 270 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG 329
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 330 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 389
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 390 EQLNGFELAGRLMKV 404
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 235 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 294
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 295 GQRLLGVPIMVQ 306
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-----------AKRTS 53
++GK +G A ++F E + ++A+ +G + +G L+I Y K K
Sbjct: 548 ESGKIKGFAFLDFADEDSAEKAVGKNGEDCEGRDLRIN-YSFPKNDNAHGGKGKGGKGKG 606
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
++ E +++GNL W +T++ L ++F DC I+ T++ETG RG+A++DF
Sbjct: 607 KGHHELGEKSASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFD 666
Query: 113 DSLSLSMALKLDQEVVRGRPVKISCAVP 140
S A KL + GR ++++ P
Sbjct: 667 TEDSAENATKLSGTDLEGRQIRVNYNQP 694
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
VE ++IGNL + +T+E L+++FS C I + T+ E+G+ +G+A +DF+D S
Sbjct: 508 VERSKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAE 567
Query: 119 MALKLDQEVVRGRPVKISCAVP 140
A+ + E GR ++I+ + P
Sbjct: 568 KAVGKNGEDCEGRDLRINYSFP 589
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINF----RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + E AV++ D ++G L + KA + P++
Sbjct: 167 ETDQSRGFGFVTMSSVDEAETAVEKFNRYD---LNGRLLTVN--KAAPRGSRPERAPRVY 221
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+
Sbjct: 222 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 281
Query: 120 ALK-LDQEVVRGRPVKISCAV--PPKKG 144
A+ LD + + GR ++++ A PP++G
Sbjct: 282 AISALDGQNLEGRAIRVNVAEERPPRRG 309
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIVEGYN 64
+G+ + F+ E +V+ AL L G ++ G+ + +Q +A K + R D T P + ++
Sbjct: 220 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIP-FH 278
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ + ITE+DL+ +F L F +TG RGY V F D+ AL
Sbjct: 279 RLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDTGRSRGYGFVQFRDATQAREALE 336
Query: 122 KLDQEVVRGRPVKI 135
K++ + GRP+++
Sbjct: 337 KMNGFDLAGRPIRV 350
>gi|336268208|ref|XP_003348869.1| hypothetical protein SMAC_01892 [Sordaria macrospora k-hell]
gi|380094128|emb|CCC08345.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 584
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T E + + F C + ++R ++ET +G+A+ +F D L AL D E
Sbjct: 106 HLGNLSYNATAETVTEFFEGCDVVNVRIIEDRETQRPKGFAYAEFKDVEGLKTALTRDGE 165
Query: 127 VVRGRPVKISCAVPPKKGINSK---SRSLPSNKR 157
GR ++I A PPK+G + SR LP+ +R
Sbjct: 166 TFDGRSIRIKIADPPKQGYGDRMESSRDLPTWER 199
>gi|225555977|gb|EEH04267.1| translation initiation factor 4B [Ajellomyces capsulatus G186AR]
Length = 512
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF+DC+++++R +K T +G+ +V+F+ L AL
Sbjct: 34 HIGNLSFEATQADISDLFADCEVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALSFQGT 93
Query: 127 VVRGRPVKISCAVPPKKGINSK-----SRSLP-SNKRATSKVTDSAGLGT 170
++GR +++S A PPK+ +++ SR P + + +V+D AG G
Sbjct: 94 FLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDAPSQRRVSDRAGFGP 143
>gi|346324686|gb|EGX94283.1| translation initiation factor eIF4B [Cordyceps militaris CM01]
Length = 570
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F+D +I S+R ++E +G+ +V+F+D L AL LD E
Sbjct: 92 HLGNLSYDATVESVTDFFADSEIVSVRIIEDREMQRPKGFGYVEFTDLEGLKKALALDNE 151
Query: 127 VVRGRPVKISCAVPPKKG 144
+GR +KI A PP+ G
Sbjct: 152 SFQGRMIKIKVADPPRGG 169
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + + F PK G
Sbjct: 273 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG 332
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 333 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 392
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 393 EQLNGFELAGRLMKV 407
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 238 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALGLS 297
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 298 GQRLLGVPIMVQ 309
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
+ DTGK G + F T + A+ L+ M+G +L I K K + K E
Sbjct: 58 YQDTGKIIGYCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKN-DVKAPED 116
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
I++ NL++D TE+++ + F C K+ ++RF + F+G+A ++F + S++ AL
Sbjct: 117 CTTIFVKNLAFDCTEDEVGEFFEKCGKVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAAL 176
Query: 122 KLDQEVVRGRPVKISCAV-PPKKGINSKS 149
KL+ +GR + I V KKG K
Sbjct: 177 KLNGTEFKGRKLTIDYEVGSQKKGFRFKQ 205
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ L + + +K+ F +C I +++ ++TG+ GY H+ FS A+KL+
Sbjct: 26 VFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEAQEAIKLN 85
Query: 125 QEVVRGRPVKISCAVPPKK 143
++V+ GR + IS A KK
Sbjct: 86 KQVMNGRYLDISLAKGEKK 104
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DT + RG + T V+RA+ G E+DG L + R P+
Sbjct: 158 DTDRSRGFGFVTMSTSEEVERAVNKFSGFELDGRLLTVNNAAPRGTPRLRQ--PRTFNSG 215
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R Y+GNL WD+ L++LFS+ K+ S + ++ETG RG+ V S+ ++ A+
Sbjct: 216 LRAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRLRGFGFVTMSNEAEMNDAIA 275
Query: 122 KLDQEVVRGRPVKISCA 138
LD + GR ++++ A
Sbjct: 276 ALDGQSFNGRAIRVNVA 292
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + + F PK G
Sbjct: 274 TKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG 333
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 334 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 393
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 394 EQLNGFELAGRLMKV 408
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R +T F+G A+++F D S+++AL L
Sbjct: 239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVALALGLS 298
Query: 125 QEVVRGRPVKI 135
+ + G P+ +
Sbjct: 299 GQRLLGVPIMV 309
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F+ + AV +AL+L+G + G +++ A K++ + T +++GNL+
Sbjct: 300 AYVVFKAKEAVNKALSLNGGVLFGNHIRVDCVGAPKSQVSEKQT---------VFVGNLA 350
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
++ +E+L KLF++C + ++R +K TG +G+ V F ++AL++ V GR
Sbjct: 351 HEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALEMTGREVSGR 410
Query: 132 PVKISC---AVPPKKGINSKS 149
P+++S PKK I +S
Sbjct: 411 PIRVSPFSKQAVPKKAIQQRS 431
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG + T ++A+ L E++G FL + KA + P+ E
Sbjct: 147 ETDRSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVN--KAAPRGSRPERAPREYEPS 204
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL WD+ + L+++FS+ K+ S R +++ETG RG+A V + ++ A+
Sbjct: 205 FRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIG 264
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR ++++ A
Sbjct: 265 ALDGQTLEGRAIRVNVA 281
>gi|72158865|ref|XP_788335.1| PREDICTED: eukaryotic translation initiation factor 4H-like
[Strongylocentrotus purpuratus]
Length = 307
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL D + DL +F+D +I S R +KETG+F+G+++V+F D+ SL ALKL+
Sbjct: 56 FVGNLPDDTVQGDLDHIFADMQIQSTRLVHDKETGKFKGFSYVEFEDTQSLKDALKLNGA 115
Query: 127 VVRGRPVKISCA 138
+ R +K+ A
Sbjct: 116 IYDDRQLKVDIA 127
>gi|325090551|gb|EGC43861.1| translation initiation factor 4B [Ajellomyces capsulatus H88]
Length = 538
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF+DC+++++R +K T +G+ +V+F+ L AL
Sbjct: 57 HIGNLSFEATQADISDLFADCEVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALSFQGT 116
Query: 127 VVRGRPVKISCAVPPKKGINSK-----SRSLP-SNKRATSKVTDSAGLGT 170
++GR +++S A PPK+ +++ SR P + + +V+D AG G
Sbjct: 117 FLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDAPSQRRVSDRAGFGP 166
>gi|302663420|ref|XP_003023352.1| hypothetical protein TRV_02454 [Trichophyton verrucosum HKI 0517]
gi|291187346|gb|EFE42734.1| hypothetical protein TRV_02454 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 14/119 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ +++LF++C+++S+R +K TG +G+ +V+F+ L AL
Sbjct: 35 HIGNLSFDATQAGIQELFAECEVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTFQGT 94
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDAD 175
++GR +++S A PPK + + S LP +R V+D G G + + D
Sbjct: 95 SLQGRNIRVSIAEPPKDRHDGRDLSDWTRKGPLPDLPGQRR----VSDRPGFGGARNFD 149
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 12/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG------- 62
+G+ + F++E ++ AL L G ++ G+ + +QP +A K ++ G
Sbjct: 251 KGVGYVEFKSEESLPAALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVL 310
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+ +F LRF ++ G RGY V+++D + A
Sbjct: 311 FHRLYVGNIHFSITEPDLRTVFG--PFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREA 368
Query: 121 L-KLDQEVVRGRPVKI 135
L K++ + GRP+++
Sbjct: 369 LEKMNGFDLAGRPIRV 384
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F + +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 167 KGIAYVEFVDQSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALANNLQKGTAGPMRLY 226
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 227 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 286
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 287 FELAGRPMKV 296
>gi|444723163|gb|ELW63824.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Tupaia
chinensis]
Length = 1050
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP----------YKATKAKRT 52
F + G FRG + F+ E A +AL LD ++G + + P + KA
Sbjct: 716 FSNRGDFRGYCYVEFKEEKAALQALELDRKNVEGRPMFVSPCVDKSKNPDFKQKEKAASL 775
Query: 53 SDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFR 104
PK+ ++ +++ NL + + E D L+ LF C ++ +R +N+ G+FR
Sbjct: 776 KRDVPKVPHDSSKDSITVFVSNLPYSMAEPDATLRPLFEACGEVVEIRPIFSNR--GDFR 833
Query: 105 GYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
GY +V+F + + AL+LD++ V GRP+ +S V K + K
Sbjct: 834 GYCYVEFKEEKAALQALELDRKNVEGRPMFVSPCVDKSKNPDFK 877
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E A +AL LD ++G + + P +K F
Sbjct: 826 FSNRGDFRGYCYVEFKEEKAALQALELDRKNVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 885
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 886 EKHKLFISGLPFSCTREELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 941
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTSNDA 174
S A +K+D ++ +K++ + PP++ + K +R P ++ + G G + A
Sbjct: 942 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGKGRTQLA 1001
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 658 QKEKAASLKRD---VPKVPHDSSKDSITVFVSNLPYSMAEPDATLRPLFEACGEVVEIRP 714
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+N+ G+FRGY +V+F + + AL+LD++ V GRP+ +S V K + K +
Sbjct: 715 IFSNR--GDFRGYCYVEFKEEKAALQALELDRKNVEGRPMFVSPCVDKSKNPDFKQKEKA 772
Query: 154 SN-KRATSKV 162
++ KR KV
Sbjct: 773 ASLKRDVPKV 782
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT----SDFTPKIVEGYNR 65
+G+ + F+ E +V AL L G ++ G+ + +QP +A K ++ S P V ++R
Sbjct: 230 KGVGYVEFKNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSVP-FHR 288
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
+Y+GN+ + ITE DL+ +F ++G RGY V F D+ AL K++
Sbjct: 289 LYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMN 348
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 349 GFDLAGRPIRV 359
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F+ + +V AL L G ++ + + +Q +A K A + S K G R+Y
Sbjct: 200 KGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNSGPMRLY 259
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI +++ + ETG +GY + F D+ AL +L+
Sbjct: 260 VGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNG 319
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 320 FELAGRPMKV 329
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG + T E A K L+G +M+G L + KA + P+ E
Sbjct: 164 ETDRSRGFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVN--KAAPRGSRPERPPREFEPS 221
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL WD+ L+++FS+ K+ S R +++ETG RG+ V + ++ A+
Sbjct: 222 CRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIA 281
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR ++++ A
Sbjct: 282 ALDGQTLDGRAIRVNVA 298
>gi|440893379|gb|ELR46176.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Bos
grunniens mutus]
Length = 958
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + FR E A +AL LD ++G + + P +K F
Sbjct: 740 FSNRGDFRGYCYVEFREEAAALQALQLDRQSVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 799
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ + L
Sbjct: 800 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENELQA 855
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTSNDA 174
S A LK+D +R +K++ + PP++ + K +R P + +V + G G + +
Sbjct: 856 SQAVLKMDGMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGKGRTQLS 915
Query: 175 DNSGAVTSNVAANA----GSGTSDVTEHIDLS 202
A+ AA A G T TE +S
Sbjct: 916 LLPRALQRPSAATAQAENGPATPATTEAPKMS 947
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG------Y 63
+G+ + FR+E +V AL L G ++ G+ + +Q +A K ++ G +
Sbjct: 250 KGVGYVEFRSEESVTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPF 309
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL 121
+R+Y+GN+ + ITE DL+ +F L F +TG RGY V F DS AL
Sbjct: 310 HRLYVGNIHFSITESDLRNVFE--PFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREAL 367
Query: 122 -KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 368 EKMNGFDLAGRPIRVGL 384
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIV 60
+G+ +G+ + F++E +V AL L G ++ G+ + +Q +A K ++ +S+ P V
Sbjct: 220 SGRSKGVGYVEFKSEDSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNSV 279
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ +++TE+DL+ +F L F + G RGY V F D+
Sbjct: 280 P-FHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAR 336
Query: 119 MAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 337 EALEKMNGFDLAGRPIRVGL 356
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F+ + +V AL L G ++ + + +Q +A K A + S K G R+Y
Sbjct: 88 KGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNSGPMRLY 147
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI +++ + ETG +GY + F D+ AL +L+
Sbjct: 148 VGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNG 207
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 208 FELAGRPMKV 217
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT----SDFTPKIVEGYNR 65
+G+ + F+ E +V AL L G ++ G+ + +QP +A K ++ S P + ++R
Sbjct: 235 KGVGYVEFKNEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIP-FHR 293
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
+Y+GN+ + ITE DL+ +F ++G RGY V F D+ AL K++
Sbjct: 294 LYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMN 353
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 354 GFDLAGRPIRV 364
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + +R AVK+ALAL+G+ + G +++ TK + + T +++GNL
Sbjct: 295 AYVVYREREAVKKALALNGTVVLGKHIRVDVVGDTKPQASESHT---------VFVGNLP 345
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
++ +E+L F+DC ++S+R +K TG +G+ V F + ++AL++ + GR
Sbjct: 346 HEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEMAGRELCGR 405
Query: 132 PVKIS 136
PV+++
Sbjct: 406 PVRVT 410
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI------QPYKATKAKRTSDFTPK 58
D+ K RG + F + +A+ DGSE+DG +++ +P +A + KR F K
Sbjct: 232 DSQKSRGFGYVEFADLESSAKAIEKDGSEIDGRAIRVNYATQRKPNEAAE-KRARVFNDK 290
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++IG+LS+ +TE+ + + F + S+R T+++TG +G+ +V FS
Sbjct: 291 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKK 143
S ALK ++ + GR +++ A PPK+
Sbjct: 351 SAALKAMNGAEIAGRAIRVDFA-PPKQ 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E +++G LSW++ + LK F C ++ S R ++++ + RG+ +V+F+D S +
Sbjct: 193 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAK 252
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
A++ D + GR ++++ A K ++ R+
Sbjct: 253 AIEKDGSEIDGRAIRVNYATQRKPNEAAEKRA 284
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI------QPYKATKAKRTSDFTPK 58
D+ K RG + F + +A+ DGSE+DG +++ +P +A + KR F K
Sbjct: 229 DSQKSRGFGYVEFADLESSAKAIEKDGSEIDGRAIRVNYATQRKPNEAAE-KRARVFNDK 287
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++IG+LS+ +TE+ + + F + S+R T+++TG +G+ +V FS
Sbjct: 288 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 347
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKK 143
S ALK ++ + GR +++ A PPK+
Sbjct: 348 SAALKAMNGAEIAGRAIRVDFA-PPKQ 373
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E +++G LSW++ + LK F C ++ S R ++++ + RG+ +V+F+D S +
Sbjct: 190 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAK 249
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
A++ D + GR ++++ A K ++ R+
Sbjct: 250 AIEKDGSEIDGRAIRVNYATQRKPNEAAEKRA 281
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD---FTPKIVEG 62
T +F+GIA I F +V AL L G + G+ + +Q +A K + + F PK G
Sbjct: 274 TKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG 333
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + + ++ AL
Sbjct: 334 PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 393
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GR +K+
Sbjct: 394 EQLNGFELAGRLMKV 408
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS + DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLS 298
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 299 GQRLLGVPIMVQ 310
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
RGIA + F +V+ A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 RGIAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINF----RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + E AV++ + +++G L + KA + P++
Sbjct: 186 ETDQSRGFGFVTMSSVDEAETAVEK---FNRYDLNGRLLTVN--KAAPRGSRPERAPRVY 240
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 120 ALK-LDQEVVRGRPVKISCAV--PPKKG 144
A+ LD + + GR ++++ A PP++G
Sbjct: 301 AISALDGQNLEGRAIRVNVAEERPPRRG 328
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG + + + A+ + +++G L + KA + P++ E
Sbjct: 172 ETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN--KAAPRGSRPERAPRVYEPA 229
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+ A+
Sbjct: 230 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 289
Query: 123 -LDQEVVRGRPVKISCAV--PPKKG 144
LD + + GR ++++ A PP++G
Sbjct: 290 ALDGQNLEGRAIRVNVAEERPPRRG 314
>gi|392574824|gb|EIW67959.1| hypothetical protein TREMEDRAFT_74367 [Tremella mesenterica DSM
1558]
Length = 563
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ E+DL+ F++ + + +R N E G+ RGYAHVDF + L AL + +
Sbjct: 88 HVGNLSYETEEDDLRAFFTELQPTGVRISKNAE-GQPRGYAHVDFPTADKLRDALAKNSQ 146
Query: 127 VVRGRPVKISCAVP 140
GR ++IS A P
Sbjct: 147 QFSGRSIRISVAEP 160
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGS-EMDGLFLKIQPYKATKA---KRTSDFTPKIV 60
+TGK RG + F T A+AL+G E+DG + + A A +R F
Sbjct: 357 NTGKSRGFGFVEFATAEGANAAVALNGQKEIDGRAVNLDKTSAKPADPERRAKAFGDSTS 416
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ +++GN+S+D+TE+ L ++F++ ++ S+R T+++T +GY +V+F D S
Sbjct: 417 APSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKK 476
Query: 120 ALKLDQEV-VRGRPVKISCAVP 140
A + + + V GR +++ A P
Sbjct: 477 AFEGARGMDVGGRTIRLDYAQP 498
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW++ + L + F+DC ++ S R ++ TG+ RG+ V+F+ + + A+ L+
Sbjct: 323 VFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGANAAVALN 382
Query: 125 -QEVVRGRPVKI 135
Q+ + GR V +
Sbjct: 383 GQKEIDGRAVNL 394
>gi|320589761|gb|EFX02217.1| translation initiation factor 4b [Grosmannia clavigera kw1407]
Length = 593
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 44 YKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEF 103
++ T +R D P + ++GNL ++I +ED++ C+++S+R ++ET
Sbjct: 65 FRETVPQRIPDKPPFLA------HLGNLDYEIMDEDIRLFLEGCEVTSVRLIEDRETKRP 118
Query: 104 RGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPK 142
+G+ + +F++ L AL LD RGR +K+ A PPK
Sbjct: 119 KGFGYAEFANVDGLKKALALDGSSFRGRSIKVKIADPPK 157
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-----SDFTPKIV 60
+G+ +G+ + F+ E +V+ AL L G ++ G+ + +Q +A K ++ S+ P +
Sbjct: 222 SGRSKGVGYVEFKNEDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNSI 281
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ +++TE+DL+ +F L F + G RGY V F D+
Sbjct: 282 P-FHRLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAR 338
Query: 119 MAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 339 EALEKMNGFDLAGRPIRVGL 358
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW IT E L++ F C +I S R T++ETG+ RG+ +VDF D+ AL++
Sbjct: 290 VFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALEMA 349
Query: 125 QEVVRGRPVKI--SCAVPPKKG 144
+ GR + + S PP+ G
Sbjct: 350 GTELDGRTINVDLSAPRPPRDG 371
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ------PYKATKAKRTSDFTPK 58
+TGK RG ++F K AL + G+E+DG + + P A F +
Sbjct: 324 ETGKSRGFGYVDFVDAAGAKAALEMAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDE 383
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+ +++GNLS++ T++ + + FSD ++S+R T+ ETG +G+A+V+F D S
Sbjct: 384 LSAPSQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSA 443
Query: 118 SMAL 121
A+
Sbjct: 444 KKAV 447
>gi|156407424|ref|XP_001641544.1| predicted protein [Nematostella vectensis]
gi|156228683|gb|EDO49481.1| predicted protein [Nematostella vectensis]
Length = 687
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL +D+ ED+ + FS KI+++R + G +G+ + +F D SL AL L+ E
Sbjct: 106 FLGNLPYDVEREDILEFFSSVKITAVRLPQDMGGGRAKGFGYAEFEDKASLIQALDLNNE 165
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS 151
+RGR V++ A + G S SRS
Sbjct: 166 SLRGRKVRVDIAGHQQGGGGSDSRS 190
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DT + RG + T E A K + E++G L + +A + P++ +
Sbjct: 149 DTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVN--RAAPRGSRPERQPRVYDAA 206
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GNL WD+ L++LFS+ K+ R +++ETG RG+ V S+ +++A+
Sbjct: 207 FRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIA 266
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR +K++ A
Sbjct: 267 ALDGQNLEGRAIKVNVA 283
>gi|322692273|gb|EFY84203.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 552
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D T E + + F C+I S+R ++E +G+ +V+F+D L AL LD E
Sbjct: 82 HLGNLAYDATNETVTEFFEGCEIVSVRIIEDREMQRPKGFGYVEFADIEGLKKALTLDGE 141
Query: 127 VVRGRPVKISCAVPPKKG 144
GR +KI A PP+ G
Sbjct: 142 SFNGRMIKIKIADPPRGG 159
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F+ E +V++A+ L G ++ G+ + Q +A K + R ++ T G
Sbjct: 195 SGRSKGVGYVEFKEEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARNTEGTATQSNGI 254
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE+DLK +F L F +E G +GY V F D
Sbjct: 255 PFHRLYVGNIHFSITEDDLKNVFE--PFGELEFVQLQKEEAGRSKGYGFVQFIDPAQAKE 312
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 313 ALEKMNGFELAGRPIRV 329
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINF----RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + E AV++ + +++G L + KA + P++
Sbjct: 171 ETDQSRGFGFVTMSSVDEAETAVEK---FNRYDLNGRLLTVN--KAAPRGSRPERAPRVY 225
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+
Sbjct: 226 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 285
Query: 120 ALK-LDQEVVRGRPVKISCAV--PPKKG 144
A+ LD + + GR ++++ A PP++G
Sbjct: 286 AISALDGQNLEGRAIRVNVAEERPPRRG 313
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT----SDFTPKIVEGYNR 65
+G+ + F+ E +V AL L G ++ G+ + +QP +A K ++ S P V ++R
Sbjct: 224 KGVGYVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP-FHR 282
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL-K 122
+Y+GN+ + ITE DL+ +F L F ++G RGY V F D+ AL K
Sbjct: 283 LYVGNIHFSITETDLQNVFE--PFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEK 340
Query: 123 LDQEVVRGRPVKI 135
++ + GRP+++
Sbjct: 341 MNGFDLAGRPIRV 353
>gi|367050156|ref|XP_003655457.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
gi|347002721|gb|AEO69121.1| hypothetical protein THITE_2119158 [Thielavia terrestris NRRL 8126]
Length = 566
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T + + + F C + S+R ++E +G+A+ +F+D L AL D +
Sbjct: 81 HLGNLSYDATVDTITEFFEGCNVLSVRIIEDREQNRPKGFAYAEFADLEGLKSALTRDGQ 140
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSL 152
+ +GR ++I A PP+ G R L
Sbjct: 141 IFQGRSIRIKVAEPPRGGFERPEREL 166
>gi|322704001|gb|EFY95601.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 555
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D T E + + F C++ S+R ++E +G+ +V+F+D L AL LD E
Sbjct: 86 HLGNLAYDATNESVTEFFEGCEVVSVRIIEDREMQRPKGFGYVEFADIEGLKKALTLDGE 145
Query: 127 VVRGRPVKISCAVPPKKG 144
GR +KI A PP+ G
Sbjct: 146 SFNGRMIKIKIADPPRGG 163
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIVEGYN 64
+G+ + F+ E +V+ AL L G ++ G+ + +Q +A K ++ TS P + ++
Sbjct: 223 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP-FH 281
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ + ITE+DL+ +F L F + G RGY V F D+ AL
Sbjct: 282 RLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALE 339
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 340 KMNGFDLAGRPIRVGL 355
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINF----RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + E AV++ + +++G L + KA + P++
Sbjct: 161 ETDQSRGFGFVTMSSVDEAETAVEK---FNRYDLNGRLLTVN--KAAPRGSRPERAPRVY 215
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+
Sbjct: 216 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 275
Query: 120 ALK-LDQEVVRGRPVKISCAV--PPKKG 144
A+ LD + + GR ++++ A PP++G
Sbjct: 276 AISALDGQNLEGRAIRVNVAEERPPRRG 303
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIVEGYN 64
+G+ + F+ E +V+ AL L G ++ G+ + +Q +A K ++ TS P + ++
Sbjct: 224 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP-FH 282
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ + ITE+DL+ +F L F + G RGY V F D+ AL
Sbjct: 283 RLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALE 340
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 341 KMNGFDLAGRPIRVGL 356
>gi|198452886|ref|XP_002137558.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
gi|198132120|gb|EDY68116.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
Length = 429
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 25 RALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLF 84
RALAL+G+E L++ P A K++ D PK + I++G+L + TEE L+++F
Sbjct: 217 RALALNGTEFKENHLRVTP--AAKSESGDDKGPKDADAKRTIFVGSLKYSATEEKLREIF 274
Query: 85 SDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKI 135
S C +I +R E G +G A+V F ++ +AL+L+Q ++ RP+ +
Sbjct: 275 SSCGEIEYIRCLQEGEKG-CKGVAYVCFKTPDAVGLALELNQTLLDDRPINV 325
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-----FTPKI 59
+TGK RG + F + AV+ AL L G E+DG + + + D F +
Sbjct: 336 NTGKSRGFGYVEFTSPDAVEAALKLTGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQK 395
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
E + +++GNLS+ +E+ L + F+ + +R T++ETG+ +G+A+VDF+D
Sbjct: 396 SEPSSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTD 450
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E I++G LSW++ + LK F +C ++ S R ++ TG+ RG+ +V+F+ ++
Sbjct: 297 EAVTTIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEA 356
Query: 120 ALKLDQEVVRGRPVKI 135
ALKL + + GRP+ +
Sbjct: 357 ALKLTGKEIDGRPINV 372
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A I F ++ +VK +L+++G+E +G +L++ ++ K + I++GNL
Sbjct: 419 AYIKFVSKESVKESLSMNGTEFEGNYLRVNASNKSENK---------FDSKKSIFLGNLH 469
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
++I + + K F C +I S+R + +TG +G+ +V+F + ++++AL+LD + R
Sbjct: 470 YNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLALELDGTTISNR 529
Query: 132 PVKISCAV 139
V++ V
Sbjct: 530 EVRVKPVV 537
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIVEGYN 64
+G+ + F+ E +V+ AL L G ++ G+ + +Q +A K ++ TS P + ++
Sbjct: 224 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP-FH 282
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ + ITE+DL+ +F L F + G RGY V F D+ AL
Sbjct: 283 RLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALE 340
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 341 KMNGFDLAGRPIRVGL 356
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIVEGYN 64
+G+ + F+ E +V+ AL L G ++ G+ + +Q +A K ++ TS P + ++
Sbjct: 224 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP-FH 282
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ + ITE+DL+ +F L F + G RGY V F D+ AL
Sbjct: 283 RLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALE 340
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 341 KMNGFDLAGRPIRVGL 356
>gi|452987975|gb|EME87730.1| hypothetical protein MYCFIDRAFT_120538, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 179
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 7 GKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVEG 62
G+ +G I F RA+ LD +G + +Q P + KA+R + P
Sbjct: 40 GRSKGFGFIEFANRDDADRAIRELDQKVFEGRRMSVQYHVPRERNKAQRNVNTKPS---- 95
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++IGN+S+ +++ DL LF + + +R ++ +G+ RG+AH DF D S + A
Sbjct: 96 -KTLFIGNMSYQMSDRDLNDLFRQIRNVLDVRVAIDRRSGQPRGFAHADFVDEASATKAK 154
Query: 122 K-LDQEVVRGRPVKISCA 138
+ L+Q+VV GR +++ +
Sbjct: 155 ELLEQKVVYGRQLRVDYS 172
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 33 EMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISS 91
+++G L + KA + P++ E R+Y+GNL WD+ L++LFS+ K+
Sbjct: 48 DLNGRLLTVN--KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 105
Query: 92 LRFGTNKETGEFRGYAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCAV--PPKKG 144
R ++ETG RG+ V SD L+ A+ LD + + GR ++++ A PP++G
Sbjct: 106 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 161
>gi|195144442|ref|XP_002013205.1| GL23520 [Drosophila persimilis]
gi|194102148|gb|EDW24191.1| GL23520 [Drosophila persimilis]
Length = 434
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 25 RALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLF 84
RALAL+G+E L++ P A K++ D PK + I++G+L + TEE L+++F
Sbjct: 222 RALALNGTEFKENHLRVTP--AAKSESGDDKGPKDADAKRTIFVGSLKYSATEEKLREIF 279
Query: 85 SDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKI 135
S C +I +R E G +G A+V F ++ +AL+L+Q ++ RP+ +
Sbjct: 280 SSCGEIEYIRCLQEGEKG-CKGVAYVCFKTPDAVGLALELNQTLLDDRPINV 330
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 5 DTGKFRGIAIINF----RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + E AV++ + +++G L + KA + P++
Sbjct: 186 ETDQSRGFGFVTMSSVDEAETAVEK---FNRYDLNGRLLTVN--KAAPRGSRPERAPRVY 240
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L++LFS+ K+ R ++ETG RG+ V SD L+
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 120 ALK-LDQEVVRGRPVKISCAV--PPKKG 144
A+ LD + + GR ++++ A PP+ G
Sbjct: 301 AISALDGQNLEGRAIRVNVAEERPPRHG 328
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRA-LALDGSEMDGLFL------KIQPYKAT-KAKRTSDFTP 57
TG RG ++F T K+A +DG E+DG + K QP A + R F
Sbjct: 40 TGNSRGFGYVHFATHEQAKKAKEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGD 99
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
K E + +++GNLSW TE+ + LF++ + ++R T ETG +G+ +V+F D
Sbjct: 100 KPSEPSSTLFVGNLSWSATEDAVWGLFNEYGVKNVRLPTEFETGRPKGFGYVEFEDIEGA 159
Query: 118 SMALK-LDQEVVRGRPVKISCAVP 140
A + L + GR +++ + P
Sbjct: 160 KKAYEALAGAELDGRNIRLDYSQP 183
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F+ E +V++A+ L G ++ G+ + Q +A K + R ++ T G
Sbjct: 284 SGRSKGVGYVEFKDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTEGTATQSNGI 343
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE+DLK +F L F +E G +GY V F D
Sbjct: 344 PFHRLYVGNIHFSITEDDLKNVFE--PFGELEFVQLQKEEQGRSKGYGFVQFIDPAQAKE 401
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 402 ALEKMNGFELAGRPIRV 418
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F+ E V++AL L G + G+ + ++ +A K + R ++ T P V
Sbjct: 211 SGRSKGVGYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSV 270
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ +++TE+DL+ +F + G RGY V F D+ A
Sbjct: 271 P-FHRLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREA 329
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 330 LEKMNGFDLAGRPIRVGL 347
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F+ E V++AL L G + G+ + ++ +A K + R ++ T P V
Sbjct: 215 SGRSKGVGYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSV 274
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ +++TE+DL+ +F + G RGY V F D+ A
Sbjct: 275 P-FHRLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREA 333
Query: 121 L-KLDQEVVRGRPVKI 135
L K++ + GRP+++
Sbjct: 334 LEKMNGFDLAGRPIRV 349
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 16/169 (9%)
Query: 10 RGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
+G + F + A +RA+ ++ +G + +Q + A + F PK + +YI
Sbjct: 150 KGFGYVTFDSVEAAQRAIEEMNQQVYEGRRVLVQ-FSAAGPREK--FRPK-GQPTRSLYI 205
Query: 69 GNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-LDQE 126
GNL++D+T+ +L +LF + + +R +++TG RG+AH DF D+ S AL+ L +
Sbjct: 206 GNLAYDLTDRELNELFKSVRNVIEVRVAVDRQTGNPRGFAHADFLDTPSAQAALEILSSK 265
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDAD 175
GR +K+ + PK+ + A S+ +D++ +SNDA+
Sbjct: 266 APHGRRLKVDFSQNPKRT---------QRRNAESQDSDNSTDVSSNDAE 305
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
IYIGNL +DIT EDLK + + G +G+ +V F + A+ +++
Sbjct: 112 IYIGNLFFDITAEDLKSKMESFGVVEKAAIISDARGLSKGFGYVTFDSVEAAQRAIEEMN 171
Query: 125 QEVVRGRP--VKISCAVPPKK 143
Q+V GR V+ S A P +K
Sbjct: 172 QQVYEGRRVLVQFSAAGPREK 192
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 10 RGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
RG + T E + K L ++DG FL + KA + P++ E RIY+
Sbjct: 190 RGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVN--KAAPRGSRPERPPRVSEPGYRIYV 247
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQE 126
GNL WD+ L+++FS+ K+ S R ++ET RG+ V S L+ A+ LD +
Sbjct: 248 GNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQ 307
Query: 127 VVRGRPVKISCA 138
+ GRP++++ A
Sbjct: 308 NLDGRPIRVNVA 319
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS-DFTPKIVE--- 61
T + +GIA + FR + + AL L G+ + G+ ++IQ A K + + PK +
Sbjct: 116 TKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNR 175
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G ++YIG+L ++ITEE LK +F KI ++ + TG +GY V +++S A
Sbjct: 176 GPMKLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKA 235
Query: 121 L-KLDQEVVRGRPVKIS 136
L +L+ + GRP+K++
Sbjct: 236 LDQLNGFELAGRPMKVN 252
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-------AKRTSDFTPKIVEG 62
+G+ I F +V A+AL G + G + ++P +A K A + T G
Sbjct: 9 KGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTAVTSGGLTGPYSGG 68
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
R+Y+GNL ++ITE+ L+++F L + E+G +G+ V F+ AL
Sbjct: 69 ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHDESGHCKGFGFVQFARLEDARNALN 128
Query: 123 LDQEV-VRGRPVKISCA 138
L+ +V + GRP+K+S
Sbjct: 129 LNGQVEIAGRPIKVSAV 145
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G+ RG + F A ++ + L EMDG +++Q KA +F+ + + +
Sbjct: 88 GRSRGYGFVEFDEVEAAQKVVDLKAMEMDGREVQLQQSKAR-----DEFSGRTTQ----V 138
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++GNL E+D+++LF C +I +R +K+T + +G+A V F DS S+ AL+ D
Sbjct: 139 FVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKDG 198
Query: 126 EVVRGRPVKIS 136
+G ++++
Sbjct: 199 SEFKGVSIRVN 209
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR 51
DT K +G A + FR +VK AL DGSE G+ +++ K+T+ K+
Sbjct: 172 DTEKKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVNEEKSTRNKQ 218
>gi|212530026|ref|XP_002145170.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
gi|210074568|gb|EEA28655.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
Length = 492
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T D+ +LF+DC+++++R +K +G+ +V+F+ L AL
Sbjct: 76 HIGNLSFDATSSDVSQLFADCEVTNVRIVEDKLNRSPKGFGYVEFASVEGLKKALTFSGT 135
Query: 127 VVRGRPVKISCAVPPKKGINSK 148
++GR +++S A PPK +S+
Sbjct: 136 TLQGRAIRVSIAEPPKDSASSR 157
>gi|170571431|ref|XP_001891725.1| hypothetical protein [Brugia malayi]
gi|158603609|gb|EDP39472.1| conserved hypothetical protein [Brugia malayi]
Length = 842
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIG 69
+G I+F TE + AL +D +++DG L + YK + ++F N++++
Sbjct: 643 KGFGYIDFSTEREARDALKMDRTQIDGRPLYVSEYKPHDKGKNTEFRYSTGLEKNKVFVN 702
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE-- 126
N+ +D TEE LK++F+ I +R T+K +G+ +G A+V+F + +MA+K
Sbjct: 703 NIHYDATEEQLKEIFTIFGTIRDIRIVTHK-SGKSKGCAYVEFENDNDAAMAVKAGDAGD 761
Query: 127 -VVRGRPVKISCAVPPKK 143
++ R + ++ + PPK+
Sbjct: 762 LILLERKLSVAISNPPKR 779
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 190 KGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQKGSAGPMRLY 249
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSD+ AL +L+
Sbjct: 250 VGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNG 309
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 310 FELAGRPMKV 319
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
T K +GIA + F +V A+ L+G ++ G+ + +QP +A + R ++ T +G R
Sbjct: 212 TRKSKGIAYVEFFDLESVPLAMGLNGQKLFGVPIIVQPTQAER-NRQANQTAASTKGPMR 270
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+Y+G+L +DI+E+ LK++F ++ + ++TG+ +GY V F ++ + A+ +L
Sbjct: 271 LYVGSLHFDISEQMLKEIFEPFGRLDRVEL-IKEDTGKSKGYGFVTFHEADAAKKAMEQL 329
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
+ + GRP+K+ ++G++ + S+ N+
Sbjct: 330 NGFELAGRPMKVGNVT--ERGMDGSAPSILDNE 360
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT----KAKRTSDFTPKIVEGYNR 65
+GIA I F +V A+ L G + G+ + +Q + +A ++ K G R
Sbjct: 191 KGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANNLQKGNAGPMR 250
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+Y+G+L ++ITEE L+ +F KI S++ + ETG +GY + FSD+ AL +L
Sbjct: 251 LYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQL 310
Query: 124 DQEVVRGRPVKI 135
+ + GRP+K+
Sbjct: 311 NGFELAGRPMKV 322
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G RG I E ++K ++G E DG L + K +R + PK ++
Sbjct: 233 GNARGFGFIQMSDEDSLKAIEGMNGVEFDGRTLNVNK-SLPKGQRPAAAAPKET----KL 287
Query: 67 YIGNLSWDITEEDLKKLFS------DCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
Y+GNLSW E L++LF DC I T++ETG+ RG+A V +L A
Sbjct: 288 YVGNLSWGTEEGALRELFGEYGSVIDCYIP-----TDRETGQHRGFAFVTMGPDDALRAA 342
Query: 121 LKLDQEVVRGRPVKISCAVP 140
+ D + GR ++++ A P
Sbjct: 343 DETDGYELDGRILRVNEAQP 362
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+IY+GNL++D T EDLK F + F G RG+ + SD SL ++
Sbjct: 197 KIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYDGNARGFGFIQMSDEDSLKAIEGMN 256
Query: 125 QEVVRGRPVKISCAVP 140
GR + ++ ++P
Sbjct: 257 GVEFDGRTLNVNKSLP 272
>gi|367027658|ref|XP_003663113.1| hypothetical protein MYCTH_2080003 [Myceliophthora thermophila ATCC
42464]
gi|347010382|gb|AEO57868.1| hypothetical protein MYCTH_2080003 [Myceliophthora thermophila ATCC
42464]
Length = 555
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F+DCK+ ++R +++ +G+A+ +F+D L AL D +
Sbjct: 84 HLGNLSFDATVETVTDFFADCKVVNVRIIEDRDQNRPKGFAYAEFADLEGLKTALTRDGQ 143
Query: 127 VVRGRPVKISCAVPPKKG 144
+ +GR +++ A PP+ G
Sbjct: 144 IFQGRTIRVRVADPPRGG 161
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 95 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 154
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 155 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 214
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 215 FELAGRPMKV 224
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELAGRPMKV 166
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVE- 61
T + +GIA + F+ +V A+ L+G ++ G+ + +QP +A + A + + + ++
Sbjct: 175 TRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQR 234
Query: 62 ---GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G R+Y+G+L ++ITEE LK +F KI + + ET +GY + F DS
Sbjct: 235 GNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDA 294
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL +L+ + GRP+K+
Sbjct: 295 KKALEQLNGFELAGRPMKV 313
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT-----PKIV 60
+G+ +G+ + F+ E +V AL L G ++ G+ + +Q +A K ++ + P V
Sbjct: 207 SGRSKGVGYVEFKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHV 266
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ +++TEEDL+ +F L F E+ RGY V F D+
Sbjct: 267 P-FHRLYVGNIHFNVTEEDLRAVFE--PFGELEFVQLQKDESDRSRGYGFVQFRDATQAR 323
Query: 119 MAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 324 EALEKMNGFDLAGRPIRV 341
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 227 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 286
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 287 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 346
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 347 FELAGRPMKV 356
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRA-LALDGSEMDGLFLKI--QPYKATKAK---RTSDFTPK 58
D+G+ RG ++F T RA G E+DG L++ QP + + + R F +
Sbjct: 430 DSGRSRGFGYVDFATSAEALRASKEAHGKELDGRALRVDLQPARGPQDRAESRAKHFKDE 489
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
N ++IG L+W +TE+D+ F++ +++ +R ++G +G+ +V+F +
Sbjct: 490 RSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNA 549
Query: 118 SMALK-LDQEVVRGRPVKISCA 138
+ AL+ ++ + + GRP++I A
Sbjct: 550 AKALETMNGQALGGRPIRIDFA 571
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 42 QPYKATKAKRT-SDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKE 99
+P +TK +T S+ P G +++G LSW++ + LK F + R +++
Sbjct: 371 EPASSTKKSKTDSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRD 430
Query: 100 TGEFRGYAHVDFSDSLSLSMALK------LDQEVVRGRPVKISCAVPPKKGINSKS---- 149
+G RG+ +VDF+ S A K LD +R V + A P+ S++
Sbjct: 431 SGRSRGFGYVDFATSAEALRASKEAHGKELDGRALR---VDLQPARGPQDRAESRAKHFK 487
Query: 150 --RSLPSN 155
RS PSN
Sbjct: 488 DERSAPSN 495
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---AKRTSDFTPKIVE- 61
T + +GIA + F+ +V A+ L+G ++ G+ + +QP +A + A + + + ++
Sbjct: 187 TRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQR 246
Query: 62 ---GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G R+Y+G+L ++ITEE LK +F KI + + ET +GY + F DS
Sbjct: 247 GNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDA 306
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL +L+ + GRP+K+
Sbjct: 307 KKALEQLNGFELAGRPMKV 325
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELTGRPMKV 166
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A I F ++ +VK +L+++G+E +G +L++ ++ K S + I++GNL
Sbjct: 409 AYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENKFDSKKS---------IFLGNLH 459
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
++I + + K F C +I S+R + +TG +G+ +V+F + ++++AL+LD + R
Sbjct: 460 YNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKNEDAVTLALELDGTTISNR 519
Query: 132 PVKISCAV 139
V++ +
Sbjct: 520 EVRVKPVI 527
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELAGRPMKV 166
>gi|196000320|ref|XP_002110028.1| hypothetical protein TRIADDRAFT_53556 [Trichoplax adhaerens]
gi|190588152|gb|EDV28194.1| hypothetical protein TRIADDRAFT_53556 [Trichoplax adhaerens]
Length = 506
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
YI NL +D+TEED+ + F D K++S+R G RG+ + +F D SL A+ L+ +
Sbjct: 95 YIANLPYDVTEEDITQFFKDSKVNSVRLPKGTTDGRPRGFGYTEFEDLESLVNAMSLNDQ 154
Query: 127 VVRGRPVKISCA 138
+++ R +++ A
Sbjct: 155 LLKNRKIRVDIA 166
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIVVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELAGRPMKV 166
>gi|295665468|ref|XP_002793285.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278199|gb|EEH33765.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 273
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTP-K 58
+ + + G RG A + F + A + A+A EM+ + + + R +++ TP +
Sbjct: 114 IVYDNRGMSRGFAYVQFDSVDAAEAAIA----EMNMTIYEGRRVVVNYSSRGSANPTPTR 169
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
E ++IGNLS+++T+ +L +LF D K ++ +R ++ TG+ RG+AH DF D S
Sbjct: 170 SNEPTRTLFIGNLSFEMTDRELNELFKDIKNVTDVRVSVDRRTGQPRGFAHADFLDVESA 229
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
A + L + GRP+++ ++ + + R+ PS
Sbjct: 230 QAAFEILKDKAPYGRPLRLDYSLSARDSTMDRLRTAPS 267
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
R+Y+G+L + +TE D+K LFS C + N++ G+ +GYA V F+D+ + +A++L+
Sbjct: 356 RVYVGSLDFALTEADVKSLFSPCG-EVISVTLNRDNGKSKGYAFVQFADAGAAKLAMELN 414
Query: 125 QEVVRGRPVKISCAVPPK 142
V GRP+K++ A P+
Sbjct: 415 GVEVAGRPLKVNFATDPE 432
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 10/142 (7%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQ----PYKATKAKRTSDF 55
M + + G RG A + ++ + A+ LD +G L +Q Y+ TKA R+ +
Sbjct: 167 MVYDNRGLSRGFAYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQYHSPKYQTTKA-RSPNG 225
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDS 114
P ++IGN+S++++++DL LF D + ++ +R ++ TG+ RG+AH DF D
Sbjct: 226 EPN--PPTKTLFIGNMSFEMSDKDLNDLFRDIRNVTDVRVAIDRRTGQPRGFAHADFIDV 283
Query: 115 LSLSMALK-LDQEVVRGRPVKI 135
S + A + L ++++ GR +++
Sbjct: 284 ASATRAKEVLKEKIIYGRQLRV 305
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 46 ATKAKRTS-----DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKE 99
ATK+ +TS + TPK +E +N +YIGNL +++T + LK++FS I S+R +
Sbjct: 113 ATKSSQTSPRGNRERTPKNIEPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNR 172
Query: 100 TGEFRGYAHVDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
G RG+A+V++ + A+ LD +V GR + + P K +K+RS
Sbjct: 173 -GLSRGFAYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQYHSP--KYQTTKARS 222
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELAGRPMKV 166
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-AKRTSDFTPKIVEGYNRIYI 68
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y+
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKRAAAMANNLQKGSAGPMRLYV 253
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQE 126
G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 GSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 313
Query: 127 VVRGRPVKI 135
+ GRP+K+
Sbjct: 314 ELAGRPMKV 322
>gi|312080354|ref|XP_003142564.1| hypothetical protein LOAG_06982 [Loa loa]
Length = 737
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 101/197 (51%), Gaps = 27/197 (13%)
Query: 3 FPDTGK----FRGIAIIN-----FRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS 53
FP+ + +RG++ ++ F TE + AL +D +++DG + + YK + +
Sbjct: 503 FPNAKEVRLVYRGMSKLHKVSHAFLTEQEAREALKMDRTQIDGRPMYVSEYKPHDKGKNT 562
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
+F N++++ N+ +D TEE LK++F+ + +R T+K +G+ +G A+V+F
Sbjct: 563 EFRYSTSLERNKVFVNNVHYDATEEQLKEIFATFGAVRDVRIVTHK-SGKSKGCAYVEFE 621
Query: 113 DSLSLSMALKLDQE-VVRGRPVKISCAVPPKK-------GINSKSRS--------LPSNK 156
+ ++A+K ++ ++ R + ++ + PPK+ N+ S S +P
Sbjct: 622 NDDDAAVAVKASEDLILLERKLSVAISNPPKRKEQLQRLSFNTTSFSHQRSKIDLIPRTL 681
Query: 157 RATSKVTDSAGLGTSND 173
T+K+ SAG SN+
Sbjct: 682 ARTTKLARSAGDNRSNE 698
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K + + K G R+Y
Sbjct: 188 KGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLY 247
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI ++ + ETG +GY + F+D+ AL +L+
Sbjct: 248 VGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG 307
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 308 FELAGRPMKV 317
>gi|226498114|ref|NP_001145579.1| uncharacterized protein LOC100279049 [Zea mays]
gi|195658417|gb|ACG48676.1| hypothetical protein [Zea mays]
Length = 120
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
I E +++Y+GNL+W + +DL++LF+ C + S R T+++ G R Y + FS + L
Sbjct: 33 IFETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQEL 92
Query: 118 SMALKLDQEVVRGRPVKISCA 138
ALKLD+ V GR + + A
Sbjct: 93 EEALKLDRTVFFGRDIVVKEA 113
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELAGRPMKV 166
>gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 46 ATKAKRTSDFTPKI-VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEF 103
++KA++T TPK G +++GNLS+ + + D++ F D ++ +RF T+ E G F
Sbjct: 349 SSKAQKTP-ITPKAQTPGSKTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTH-EDGSF 406
Query: 104 RGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
+GY HV+F + + AL+L+ + + GR V++ A
Sbjct: 407 KGYGHVEFVTAEAAHKALELNGQDLLGRAVRLDLA 441
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI----- 59
+ G F+G + F T A +AL L+G ++ G +++ A+ ++TP+
Sbjct: 402 EDGSFKGYGHVEFVTAEAAHKALELNGQDLLGRAVRLD-----LARERGEYTPRTGREEN 456
Query: 60 -------VEG---YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAH 108
EG + R + N + D L++ F+ C KI R T+ E G +G A+
Sbjct: 457 SFQRQGRSEGTTIFVRGFDKNEAEDQIRSSLEEHFASCGKIFKTRIPTDPE-GYIKGMAY 515
Query: 109 VDFS--DSLSLSMALKLDQEVVRGRPVKISCAVP 140
++F+ DS +L+ AL+LD V G + + A P
Sbjct: 516 IEFANGDSDALNKALELDGSEVGGYNLTVQEAKP 549
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSD---FTPKIV 60
+G+ +G+ + F+ E +V AL L G ++ G+ + +Q +A K + RT++ P V
Sbjct: 196 SGRSKGVGYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHV 255
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ +++TE+DL+ +F L F ET RGY V F D+
Sbjct: 256 P-FHRLYVGNIHFNVTEQDLQAVFD--PFGELEFVQLQKDETNRSRGYGFVQFRDAGQAR 312
Query: 119 MAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 313 EALEKMNGFDLAGRPIRV 330
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 17/147 (11%)
Query: 5 DTGKFRGIAIINFRTEGAVKRA-LALDGSEMDGLFLKIQPYKATKAKR----------TS 53
+TG+ RG A ++ E V+RA AL+G E+DG L++ +A +A+R
Sbjct: 949 ETGRSRGFAFVSMNNEEDVERASAALNGREVDGRELRVSKAQA-QAERGERPMRMPRQRR 1007
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
DF EG R+Y GNLSW + + DL+ L S+ + R T+++TG RG+ V S
Sbjct: 1008 DF--DQAEG-RRVYFGNLSWGMDQYDLQDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMS 1064
Query: 113 DSLSL-SMALKLDQEVVRGRPVKISCA 138
++ + +L+ + V GR ++++ A
Sbjct: 1065 NTTEADEVVAQLNGQDVDGRVLRVNIA 1091
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA-LK 122
+R+Y+GNLSW +T+E L +LFS+ + ++ETG RG+A V ++ + A
Sbjct: 914 HRVYVGNLSWGVTDESLAELFSEFDVRDASVMKDRETGRSRGFAFVSMNNEEDVERASAA 973
Query: 123 LDQEVVRGRPVKISCA 138
L+ V GR +++S A
Sbjct: 974 LNGREVDGRELRVSKA 989
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 236
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 237 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 296
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 297 FELAGRPMKV 306
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 37 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 96
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 97 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 156
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 157 FELTGRPMKV 166
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 236
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 237 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 296
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 297 FELAGRPMKV 306
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K + + K G R+Y
Sbjct: 171 KGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLY 230
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI ++ + ETG +GY + F+D+ AL +L+
Sbjct: 231 VGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG 290
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 291 FELAGRPMKV 300
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKAT-KAKRTSDFTPK----- 58
D+G+ RG ++F T A ++A ++ +G FL+ + + AK ++D TP
Sbjct: 324 DSGRSRGFGYVDFETPEAAEKAY----NDKNGAFLQGREMRLDFAAKPSADSTPNARAAE 379
Query: 59 --------IVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHV 109
I + +++GNLS+ EE + F+ K+ SLR T++E+G +G+A+V
Sbjct: 380 RARKHGDVISPESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYV 439
Query: 110 DFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
FS A + L+ + GRPV++ A P
Sbjct: 440 TFSSVDDAKAAFEALNGSDLDGRPVRLDFAKP 471
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+++GNL W + + L + F + + ++ R T+K++G RG+ +VDF + A
Sbjct: 290 LFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKAYNDK 349
Query: 124 DQEVVRGRPVKISCAVPP 141
+ ++GR +++ A P
Sbjct: 350 NGAFLQGREMRLDFAAKP 367
>gi|67900726|ref|XP_680619.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
gi|40742531|gb|EAA61721.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
Length = 496
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 84 HIGNLSFDATSGDISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 143
Query: 127 VVRGRPVKISCAVPPK----KGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTS 182
++GR +++S A PPK K ++ R + +V D A G + DN S
Sbjct: 144 TLQGRSIRVSIAEPPKERDVKELDWTRRGPLPDVAPPRRVPDRASFG--RNLDNLSDAGS 201
Query: 183 NVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSD 242
G + GK+R + +E KG LS +++ + D
Sbjct: 202 EPRRRGGFES------------DGKVRDFSNWE--RKGPLSPPPMREGRPRN------DD 241
Query: 243 NAGSRT 248
NAG RT
Sbjct: 242 NAGFRT 247
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 250 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 309
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 310 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 369
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 370 FELAGRPMKV 379
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
TG+ +G ++F T A ++A+A ++G E+DG + + P A R F +
Sbjct: 428 TGRSKGFGYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGDTVSA 487
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++GN+S++ E+ L + F + I S+R T++ETG+ +G+ +V+F+ + A
Sbjct: 488 ESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSA 547
Query: 121 LK-LDQEVVRGRPVKISCAVP 140
L+ + + GR +++ + P
Sbjct: 548 FNALNGKDIAGRNIRLDFSQP 568
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
I++G LSW++ +E LK F C ++ +++TG +G+ +V FS + A+ ++
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 124 DQEVVRGRPVKISCAVP 140
+ + + GR V ++ A P
Sbjct: 453 NGKEIDGRAVNVNAATP 469
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 259
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 260 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 319
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 320 FELTGRPMKV 329
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-------AKRTSDFTPKIVEG 62
+G+ I F +V A+AL G + G + ++P +A K A + G
Sbjct: 37 KGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAVASGGLIGPYTGG 96
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
R+YIGNL ++ITE+ L+++F L + E G +G+ V F+ AL
Sbjct: 97 ARRLYIGNLHFNITEDQLRQVFEPFGAVELVQLPHDEGGHCKGFGFVQFARLEDARNALN 156
Query: 123 LDQEV-VRGRPVKISC 137
L+ +V + GRP+K+S
Sbjct: 157 LNGQVEIAGRPIKVSA 172
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 74 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 133
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 134 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 193
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 194 FELAGRPMKV 203
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELAGRPMKV 301
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA------KRTSDFT 56
+ D+GK RG A + F E A+K+AL LDG + +L I+ +A +A ++ + T
Sbjct: 102 YQDSGKPRGYAHVVFDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTT 161
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
K V+G ++I L +++ E +++ + C I+S+R T + +G+ +V+FS
Sbjct: 162 KKAVKGCRTVFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFS 218
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+ + + E DL FS C + +R +++G+ RGYAHV F D +L ALKLD
Sbjct: 70 VYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKALKLD 129
Query: 125 QEVVRGRPVKISCAVPPK 142
+ + R + I A P+
Sbjct: 130 GQYLFNRYLSIRRAEAPR 147
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 161 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 220
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 221 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 280
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 281 FELAGRPMKV 290
>gi|259483295|tpe|CBF78566.1| TPA: translation initiation factor 4B (AFU_orthologue;
AFUA_2G16400) [Aspergillus nidulans FGSC A4]
Length = 497
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 85 HIGNLSFDATSGDISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 144
Query: 127 VVRGRPVKISCAVPPK----KGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTS 182
++GR +++S A PPK K ++ R + +V D A G + DN S
Sbjct: 145 TLQGRSIRVSIAEPPKERDVKELDWTRRGPLPDVAPPRRVPDRASFG--RNLDNLSDAGS 202
Query: 183 NVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSD 242
G + GK+R + +E KG LS +++ + D
Sbjct: 203 EPRRRGGFES------------DGKVRDFSNWE--RKGPLSPPPMREGRPRN------DD 242
Query: 243 NAGSRT 248
NAG RT
Sbjct: 243 NAGFRT 248
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K + + K G R+Y
Sbjct: 173 KGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLY 232
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI ++ + ETG +GY + F+D+ AL +L+
Sbjct: 233 VGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG 292
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 293 FELAGRPMKV 302
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 236
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 237 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 296
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 297 FELAGRPMKV 306
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 271 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 330
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 331 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 390
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 391 FELAGRPMKV 400
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 93 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 152
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 153 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 212
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 213 FELAGRPMKV 222
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA---KRTSDFTPKIVE 61
DT + RG + F + +A+ +G E+DG +++ A K KR F K
Sbjct: 240 DTQRSRGFGYVEFADVDSAIKAIEFEGKELDGRAVRVNFANARKPDADKRAKVFNDKRSP 299
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ ++IG+L +D TE+ + + F + + S+R T++ETG +G+ +V F D + A
Sbjct: 300 PADTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAA 359
Query: 121 LK-LDQEVVRGRPVKISCAVPPK 142
L+ L+ R ++I A PPK
Sbjct: 360 LEALNGSEFGSRRIRIDFA-PPK 381
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E N +++G LSW+I + L F+ C ++ S R +++T RG+ +V+F+D S
Sbjct: 201 EATNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIK 260
Query: 120 ALKLDQEVVRGRPVKISCA 138
A++ + + + GR V+++ A
Sbjct: 261 AIEFEGKELDGRAVRVNFA 279
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 259
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 260 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 319
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 320 FELAGRPMKV 329
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 191 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 311 FELAGRPMKV 320
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 198 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 257
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 258 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 317
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 318 FELAGRPMKV 327
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 243 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 302
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 303 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 362
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 363 FELAGRPMKV 372
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 168 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 227
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 228 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 287
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 288 FELAGRPMKV 297
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 167 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 226
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 227 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 286
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 287 FELAGRPMKV 296
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELTGRPMKV 323
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP-----KIVEGYN 64
+G+ I F +V A+AL G + G + ++P +A K S T G
Sbjct: 267 KGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGSGPYSGGAR 326
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
R+Y+GNL ++ITE+ L+++F I L ETG +G+ V F+ AL L+
Sbjct: 327 RLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLN 386
Query: 125 QEV-VRGRPVKIS 136
+V + GRP+K+S
Sbjct: 387 GQVEIAGRPIKVS 399
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 185 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 244
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 245 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 304
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 305 FELAGRPMKV 314
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 161 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 220
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 221 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 280
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 281 FELAGRPMKV 290
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELTGRPMKV 301
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI---QPYKATKAKRTSDFTPKI-- 59
TG+ +G + +R A+ +G +G L + +P ++ S P++
Sbjct: 48 TGRSKGFGFLTYRQYDHAMDAIDKTNGKNWNGRVLNVRFLKPKTGSEKDMISTSAPEVPV 107
Query: 60 ------VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
+ +Y+GNLS++ITE+ ++++FS I ++R + +T +FRG+ +V F
Sbjct: 108 PKISTSAKNCTTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFY 167
Query: 113 DSLSLSMALKLDQEVVRGRPVKI 135
D+ S + AL + ++V GRP+ +
Sbjct: 168 DTESCTKALATNGKIVIGRPMHV 190
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELAGRPMKV 301
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP-KIVEGY 63
+TG+ RG ++F TE + +A+ +GS ++G ++++ K + K + + +
Sbjct: 39 NTGRPRGFGFVSFSTEDGLNKAMEQNGSLINGREIRVEVAKGSLGKNSENVRQNRNYNDE 98
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N++++ +LSW+ T+E L+ FS C KI + T+++TG RG V FS ++ A+
Sbjct: 99 NKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTREEMNNAIS 158
Query: 123 -LDQEVVRGRPVKI 135
++ + GR + +
Sbjct: 159 TMNGSTLDGRQIAV 172
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|401402625|ref|XP_003881295.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
gi|325115707|emb|CBZ51262.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
Length = 710
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKI---------QPYKATKAKRTSDFT---- 56
+GIA I F TE A ++A+ + ++ +G L+I QP + +
Sbjct: 484 KGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQPGGGERGRGRGGREQGGG 543
Query: 57 ----------PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRG 105
PK ++ + NLS++ TEE ++ LF +C +I +R ++TG+F+G
Sbjct: 544 RGGGGAGGDRPKAAPN-KQVVVRNLSFNATEESIRSLFEECGEIQEVRMPVFEDTGKFKG 602
Query: 106 YAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
A ++F S + A++ + V GR V I A+P
Sbjct: 603 QAFIEFDSIESATKAVEYNNTDVDGRTVWIDFALP 637
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-----SDFTPKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K ++ S P + ++
Sbjct: 219 KGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIP-FH 277
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F E G RGY V F D+ AL
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALE 335
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 336 KMNGFDLAGRPIRVGL 351
>gi|224011371|ref|XP_002295460.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583491|gb|ACI64177.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GNLS+ I E+ +++ F DC +I+S+RF ++ETG F+G+ HV+F +S + A++L
Sbjct: 3 VFVGNLSFHIDEDTVRETFKDCGEIASVRFAEDRETGAFKGFGHVEFVESEATDKAVELA 62
Query: 125 QEVVRGRPVKISCA 138
V GR +++ A
Sbjct: 63 GMDVMGRAIRVDYA 76
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELAGRPMKV 301
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|340501754|gb|EGR28498.1| ubiquitin-conjugating enzyme family protein, putative
[Ichthyophthirius multifiliis]
Length = 453
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS--DFTPKIVEG 62
+ G+ +G+A + F++E + +A+ G +L I+ K + S D T K
Sbjct: 199 NDGRSKGLAFVTFKSEESSIKAIENSNINFLGRYLAIEKIKPRYERMGSILDETQKT--- 255
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
I++GNLS+ EDL+K F C +I R ++ G+ RG+ HV+F+D + AL
Sbjct: 256 ---IFVGNLSFKTGSEDLRKFFQSCGEIIDARVA--QQDGKSRGFGHVEFADVSGVKKAL 310
Query: 122 KLDQEVVRGRPVKISCAVPPKKGIN 146
K E + GR +K+ A +K N
Sbjct: 311 KKGGEEIDGRQIKVDIAASKQKRQN 335
>gi|302411083|ref|XP_003003375.1| translation initiation factor 4B [Verticillium albo-atrum VaMs.102]
gi|261358399|gb|EEY20827.1| translation initiation factor 4B [Verticillium albo-atrum VaMs.102]
Length = 395
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T + + + F+ C+I S+R ++E +G+A+ +F+ L AL+LD E
Sbjct: 122 HLGNLSYDATNDTVNEFFAGCEIISVRIIEDREQMRPKGFAYAEFATLDGLKKALELDGE 181
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVAA 186
+GR +++ A PP+ + R SN+ ++D + G D G
Sbjct: 182 NFQGRTIRVKIADPPR----NDGRGGDSNR----DLSDWSRKGPLADLPGRGGNDRGGDF 233
Query: 187 NAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAGS 246
G + E + + GK+R +E KG L+ A + +G
Sbjct: 234 GERRGPREPREPREFAPDDGKVRDFGNWE--RKGPLAPA-------------PQPERSGP 278
Query: 247 RTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSS 291
R G+ + AGLG + S G RR++ GE +L
Sbjct: 279 REGSHSGEAGLGPRSES-------YRGGDRRQSPATWGEGQNLPP 316
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-----SDFTPKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K ++ S P + ++
Sbjct: 219 KGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIP-FH 277
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F E G RGY V F D+ AL
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALE 335
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 336 KMNGFDLAGRPIRVGL 351
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELTGRPMKV 301
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELTGRPMKV 323
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-----SDFTPKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K ++ S P + ++
Sbjct: 219 KGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIP-FH 277
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F E G RGY V F D+ AL
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALE 335
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 336 KMNGFDLAGRPIRVGL 351
>gi|327352462|gb|EGE81319.1| translation initiation factor 4B [Ajellomyces dermatitidis ATCC
18188]
Length = 582
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 14/114 (12%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF++C+++++R +K T +G+ +V+F+ L AL
Sbjct: 100 HIGNLSFEATQGDISDLFAECQVTNVRVVEDKITRAPKGFGYVEFATVEGLKKALSFQGT 159
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGT 170
++GR +++S A PPK+ +++ S +PS +R V+D G G
Sbjct: 160 PLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDVPSQRR----VSDRPGFGP 209
>gi|242761549|ref|XP_002340201.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
gi|218723397|gb|EED22814.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
Length = 486
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T D+ +LF+DC+++++R +K +G+ +V+F+ L AL
Sbjct: 76 HIGNLSFDATSSDVSQLFADCEVTNVRIVEDKLNRSPKGFGYVEFATVEGLKKALTFSGT 135
Query: 127 VVRGRPVKISCAVPPK 142
++GR +++S A PPK
Sbjct: 136 TLQGRAIRVSIAEPPK 151
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 231
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 232 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 291
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 292 FELAGRPMKV 301
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 163 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 222
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 223 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 282
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 283 FELAGRPMKV 292
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+YIGNL + T ++L+K F C I+ + TNK TG +G+A+++FSD+ + AL L+
Sbjct: 126 VYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALSLN 185
Query: 125 QEVVRGRPVKISC 137
+ +GR +KIS
Sbjct: 186 DSLFKGRNLKISA 198
>gi|261200353|ref|XP_002626577.1| translation initiation factor 4B [Ajellomyces dermatitidis
SLH14081]
gi|239593649|gb|EEQ76230.1| translation initiation factor 4B [Ajellomyces dermatitidis
SLH14081]
Length = 534
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 14/114 (12%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF++C+++++R +K T +G+ +V+F+ L AL
Sbjct: 52 HIGNLSFEATQGDISDLFAECQVTNVRVVEDKITRAPKGFGYVEFATVEGLKKALSFQGT 111
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGT 170
++GR +++S A PPK+ +++ S +PS +R V+D G G
Sbjct: 112 PLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDVPSQRR----VSDRPGFGP 161
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 32/221 (14%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI- 66
K +G A I+F+++ V+ A+AL E++G L I+ + + + P +R+
Sbjct: 115 KIKGFAYIDFKSQEHVETAIALSEQELNGRRLLIKDANSFEGRPQKAEEPLSKNPPSRVL 174
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++GNLS+D TEE L++ F C +I +R T +++G+ +G+ +DF D + ALK D+
Sbjct: 175 FVGNLSFDTTEELLEEHFRHCGEIVRIRMATFEDSGKCKGFCFIDFKDIEGPTNALK-DK 233
Query: 126 EVVR--GRPVKIS-------------CAVPPKKGINSKSRSLPSNKRATSKVTDSAGLG- 169
V + RP+++ A P ++ R LP + V LG
Sbjct: 234 TVRKLINRPLRLEYGEDRSARKVGKRAADRPTIAEDTGERQLPQRQTEHKVVARERSLGF 293
Query: 170 ------------TSNDADNSGAVTSNVA-ANAGSGTSDVTE 197
S D S V S+VA ANA ++ + E
Sbjct: 294 QTKKHNFEKNGRYSTHHDPSKRVASSVALANAPRQSAAIVE 334
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-----SDFTPKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K ++ S P + ++
Sbjct: 219 KGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNSIP-FH 277
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F E G RGY V F D+ AL
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALE 335
Query: 122 KLDQEVVRGRPVKISC 137
K++ + GRP+++
Sbjct: 336 KMNGFDLAGRPIRVGL 351
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 170 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 229
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 230 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 289
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 290 FELAGRPMKV 299
>gi|239607471|gb|EEQ84458.1| translation initiation factor 4B [Ajellomyces dermatitidis ER-3]
Length = 562
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 64/114 (56%), Gaps = 14/114 (12%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ T+ D+ LF++C+++++R +K T +G+ +V+F+ L AL
Sbjct: 74 HIGNLSFEATQGDISDLFAECQVTNVRVVEDKITRAPKGFGYVEFATVEGLKKALSFQGT 133
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGT 170
++GR +++S A PPK+ +++ S +PS +R V+D G G
Sbjct: 134 PLQGRNIRVSVAEPPKERQDTRDYSDWSRKGPLPDVPSQRR----VSDRPGFGP 183
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEG- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K + RT D G
Sbjct: 247 SGRSKGVGYVEFKNEESVPAAIQLTGQKLMGIPIIAQLTEAEKNRQARTGDGNNGNNNGV 306
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE DL+ +F L F +E G RGY V F D
Sbjct: 307 PFHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKEEGGRSRGYGFVQFRDPAQAKE 364
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 365 ALEKMNGFDLAGRPIRV 381
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GNL +++ +E +K+ F + ++ +RF T E G FRG+ HV+F+ + + A
Sbjct: 444 GSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTF-EDGNFRGFGHVEFATAEAAKKA 502
Query: 121 LKLDQEVVRGRPVKISCA 138
L+L + GRPV++ A
Sbjct: 503 LELAGHDLMGRPVRLDLA 520
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ------PYKATKAKRTSDF 55
TF D G FRG + F T A K+AL L G ++ G +++ Y + S F
Sbjct: 479 TFED-GNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLARERGAYTPGSGRDNSSF 537
Query: 56 TPKIVEGYNRIYIGNL--SWDITE--EDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
N I+I S DI + L++ F C +I+ + + ETG +G A++D
Sbjct: 538 KKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMD 597
Query: 111 FSDSLSLSMALKLD 124
F+D+ SLS A +L+
Sbjct: 598 FADNGSLSKAYELN 611
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI---QPYKATKAKRTSDFTPKIV 60
++GK RG A + F + ++A+ ++G ++DG + + QP + KR F
Sbjct: 146 NSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQPNPEKRAQVFGDSES 205
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
+ +++GNLSW+ TE+ L F + ++ +R T++E+G+ +G+ +V+F D
Sbjct: 206 QPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGD 259
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
N +++G LSW++ + L + F C + + R ++ +G+ RG+A+V+FS A+
Sbjct: 110 NTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVE 169
Query: 122 KLDQEVVRGRPVKISCAVP 140
+++ + + GR V + + P
Sbjct: 170 EMNGKQIDGREVNVDISQP 188
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K + + K G R+Y
Sbjct: 190 KGIAYIEFVETSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLY 249
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITEE L+ +F KI ++ + ETG +GY + F+D+ AL +L+
Sbjct: 250 VGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG 309
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 310 FELAGRPMKV 319
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GNL +++ +E +K+ F + ++ +RF T E G FRG+ HV+F+ + + A
Sbjct: 468 GSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTF-EDGNFRGFGHVEFATAEAAKKA 526
Query: 121 LKLDQEVVRGRPVKISCA 138
L+L + GRPV++ A
Sbjct: 527 LELAGHDLMGRPVRLDLA 544
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ------PYKATKAKRTSDF 55
TF D G FRG + F T A K+AL L G ++ G +++ Y + S F
Sbjct: 503 TFED-GNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLARERGAYTPGSGRDNSSF 561
Query: 56 TPKIVEGYNRIYIGNL--SWDITE--EDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
N I+I S DI + L++ F C +I+ + + ETG +G A++D
Sbjct: 562 KKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMD 621
Query: 111 FSDSLSLSMALKLD 124
F+D+ SLS A +L+
Sbjct: 622 FADNGSLSKAYELN 635
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GNL +++ +E +K+ F + ++ +RF T E G FRG+ HV+F+ + + A
Sbjct: 447 GSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTF-EDGNFRGFGHVEFATAEAAKKA 505
Query: 121 LKLDQEVVRGRPVKISCA 138
L+L + GRPV++ A
Sbjct: 506 LELAGHDLMGRPVRLDLA 523
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ------PYKATKAKRTSDF 55
TF D G FRG + F T A K+AL L G ++ G +++ Y + S F
Sbjct: 482 TFED-GNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLARERGAYTPGSGRDNSSF 540
Query: 56 TPKIVEGYNRIYIGNL--SWDITE--EDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
N I+I S DI + L++ F C +I+ + + ETG +G A++D
Sbjct: 541 KKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMD 600
Query: 111 FSDSLSLSMALKLD 124
F+D+ SLS A +L+
Sbjct: 601 FADNGSLSKAYELN 614
>gi|428183384|gb|EKX52242.1| hypothetical protein GUITHDRAFT_102145 [Guillardia theta CCMP2712]
Length = 533
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 54 DFTPKIVEGYNR--IYIGNLSWDITEEDLKKLFSDCKIS---SLRFGTNKETGEFRGYAH 108
D K EG+ + +++G L +D+T +D+K+ F+ C S+R T++ TG+ RG A
Sbjct: 345 DLPAKEKEGFVKHILFLGQLPFDVTADDIKQHFASCAPHDQMSIRVLTDRVTGKPRGIAF 404
Query: 109 VDFSDSLSLSMALKLDQEVVRGRPVKI 135
++F DS + AL LD ++RGR +++
Sbjct: 405 LEFKDSTAAEAALSLDHSIMRGRRIRV 431
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GNL +++ +E +K+ F + ++ +RF T E G FRG+ HV+F+ + + A
Sbjct: 434 GSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTF-EDGNFRGFGHVEFATAEAAKKA 492
Query: 121 LKLDQEVVRGRPVKISCA 138
L+L + GRPV++ A
Sbjct: 493 LELAGHDLMGRPVRLDLA 510
>gi|330923477|ref|XP_003300256.1| hypothetical protein PTT_11446 [Pyrenophora teres f. teres 0-1]
gi|311325702|gb|EFQ91646.1| hypothetical protein PTT_11446 [Pyrenophora teres f. teres 0-1]
Length = 529
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D+ LF+DC+++++R +K + +G+ +V+F L AL L
Sbjct: 79 HLGNLSFDATEGDVNDLFADCEVTNVRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGT 138
Query: 127 VVRGRPVKISCAVPPK 142
+GR +++S A PPK
Sbjct: 139 SFQGRNIRVSVAEPPK 154
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + P+ G
Sbjct: 206 SGRSKGVGYVEFKDESSVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGQSA 263
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE D++ +F L F ETG RGY V F D
Sbjct: 264 SAPFHRLYVGNIHFSITENDIQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 321
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 322 REALEKMNGFDLAGRPIRV 340
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|384249082|gb|EIE22564.1| hypothetical protein COCSUDRAFT_63712 [Coccomyxa subellipsoidea
C-169]
Length = 557
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F + G+ ALA + E +G +++ A T + E +++GNL
Sbjct: 301 AYVVFSSGGSASHALAHNMREFEGRHIRVDRAAAVSKGTAGGGTQVLYESARSVFVGNLP 360
Query: 73 WDITEEDLKKLFSDCK-----ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEV 127
+D +E+L +LF D K ++++R + +T +G A V+FS + MA+ D V
Sbjct: 361 FDTQDEELIELFGDGKGGPGNVTAVRIVRDPKTSVGKGIAFVEFSGRPAARMAMSADGRV 420
Query: 128 VRGRPVKIS 136
+RGR ++++
Sbjct: 421 LRGRQIRVA 429
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + P+ G
Sbjct: 206 SGRSKGVGYVEFKDEASVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGQSA 263
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE D++ +F L F ETG RGY V F D
Sbjct: 264 SAPFHRLYVGNIHFSITENDIQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 321
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 322 REALEKMNGFDLAGRPIRV 340
>gi|335301350|ref|XP_001926720.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sus scrofa]
Length = 959
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E A +RAL LD ++G + + P +K F
Sbjct: 735 FSNRGDFRGYCYVEFKEEAAAQRALELDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 794
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 795 EKHKLFISGLPFSCTREELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 850
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A LK+D V+ +K++ + PP++ K +R P ++ + G G +
Sbjct: 851 SQAVLKMDGMTVKENIIKVAISNPPQRKFPEKPEARKAPGGPLVPRQIYGARGKGRT 907
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 36 GLFLKIQPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-K 88
G+ L +P + A R PK++ ++ +++ NL + + E L+ LF C
Sbjct: 670 GVELPSKPKERVAAPRRD--VPKVLHDSSKDGITVFVSNLPYSLEEPATVLRPLFEACGD 727
Query: 89 ISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINS 147
+ +R +N+ G+FRGY +V+F + + AL+LD++ V GRP+ +S V K +
Sbjct: 728 VVEIRPIFSNR--GDFRGYCYVEFKEEAAAQRALELDRKSVEGRPMFVSPCVDKSKNPDF 785
Query: 148 K 148
K
Sbjct: 786 K 786
>gi|400599198|gb|EJP66902.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 537
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T E + F+ +I S+R ++E +G+ +V+F+D L AL+LD E
Sbjct: 71 HLGNLSYEATVESVTDFFAGSEIVSVRIIEDREMQRPKGFGYVEFTDLEGLKKALQLDGE 130
Query: 127 VVRGRPVKISCAVPPKKG 144
+GR +KI A PP+ G
Sbjct: 131 SFQGRMIKIKIADPPRSG 148
>gi|345487396|ref|XP_001600207.2| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
factor 4B [Nasonia vitripennis]
Length = 535
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
YI NL +D+ EEDL + F D K+SS+R KE +FRGY +V F D SL AL +
Sbjct: 85 YISNLPYDVEEEDLIEFFQDMKVSSMRLP--KEGNKFRGYGYVQFEDRQSLIDALSMIDT 142
Query: 127 VVRGRPVKISCA 138
++ R ++I +
Sbjct: 143 NLKSRRMRIEVS 154
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYMEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|255711606|ref|XP_002552086.1| KLTH0B06886p [Lachancea thermotolerans]
gi|238933464|emb|CAR21648.1| KLTH0B06886p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNRI 66
K +G A +NFRT+ + +AL S ++G + I+ + + +D +RI
Sbjct: 177 KNKGFAHMNFRTQKQMDAVIALSESHLNGRNMLIKNSASFDGRPDKNDLISMSKNPPSRI 236
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T+E LKK F C +I +R T ++TG+ +G+A VDF + + ALK D
Sbjct: 237 LFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDTGKCKGFAFVDFKNEEGPTNALK-D 295
Query: 125 QEVVR--GRPVKI 135
+ R GRP+++
Sbjct: 296 KTCRRIAGRPLRM 308
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV---EG 62
T + +GIA + F +V AL+L G + G + +QP ++ K + S G
Sbjct: 266 TRRSKGIAYVEFWDLDSVPLALSLHGKRLLGAPIVVQPTQSEKNRMASAMLATAFTQNRG 325
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++Y+G+L ++ITEE L+ +F KI S++ + ET RGY + F +S A+
Sbjct: 326 PMKLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAM 385
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 386 EQLNGFELAGRPMKV 400
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ L+ I DL++ FS+ K+ +R T+ +T +G A+V+F D S+ +AL L
Sbjct: 231 VFCMQLARSIRPRDLEEFFSEVAKVRDVRIITDSKTRRSKGIAYVEFWDLDSVPLALSLH 290
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 291 GKRLLGAPIVVQ 302
>gi|198422045|ref|XP_002120923.1| PREDICTED: similar to eukaryotic translation initiation factor 4B
[Ciona intestinalis]
Length = 497
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL +D E L++ F D ++++R +E G FRGY +V F D SL AL+++ E
Sbjct: 99 YVGNLPYDADEFVLQEFFKDIPMTNVRL--QEENGRFRGYGYVQFPDKQSLIQALQMNDE 156
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 157 TLQKRVIRVDIA 168
>gi|345564521|gb|EGX47483.1| hypothetical protein AOL_s00083g419 [Arthrobotrys oligospora ATCC
24927]
Length = 530
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D +E+D+ + F+ C IS++R ++ +G+ +V+F L AL L+
Sbjct: 76 HVGNLSFDASEDDISEYFAQCDISNVRLVRDRIGDRPKGFGYVEFHTLDGLKKALDLNNG 135
Query: 127 VVRGRPVKISCAVPPK 142
++R R V+IS A PPK
Sbjct: 136 IIRQRNVRISVADPPK 151
>gi|320037732|gb|EFW19669.1| translation initiation factor 4B [Coccidioides posadasii str.
Silveira]
Length = 522
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+ +LF C+++S+R +K T +G+ +V+F+ L AL
Sbjct: 57 HIGNLSFDATQADISELFEACEVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTYQGT 116
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVAA 186
++GR +++S A PPK+ +++ S S K + G D SG A
Sbjct: 117 SLQGRNIRVSVAEPPKERHDARDLSDWSRKGPLPDLPQRRG------PDRSGYAPRGFDA 170
Query: 187 NAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
+ +G S+ GK+R + +E KG L A
Sbjct: 171 TSDAG-SERGGRRPYEPADGKMRDFSTWE--RKGPLPPAA 207
>gi|302891931|ref|XP_003044847.1| hypothetical protein NECHADRAFT_42935 [Nectria haematococca mpVI
77-13-4]
gi|256725772|gb|EEU39134.1| hypothetical protein NECHADRAFT_42935 [Nectria haematococca mpVI
77-13-4]
Length = 566
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D+T + + F+ C + S+R ++E +G+ +V+F+ L AL LD E
Sbjct: 100 HLGNLAYDVTNDAVTDFFTGCDVVSVRLIEDRELQRPKGFGYVEFATVEGLKQALALDGE 159
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSL 152
+GR V+I A PP+ G + S+
Sbjct: 160 SFQGRTVRIKVADPPRGGDPGRGDSI 185
>gi|156120369|ref|NP_001095330.1| squamous cell carcinoma antigen recognized by T-cells 3 [Bos
taurus]
gi|154425531|gb|AAI51266.1| SART3 protein [Bos taurus]
Length = 957
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + FR E A +AL LD ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFREEAAALQALQLDRQSVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ C+ + +R TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFVSGLPFSCTKEELEEI---CRAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTSNDA 174
S A LK+D +R +K++ + PP++ + K +R P + +V + G G + +
Sbjct: 855 SQAVLKMDGMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGKGRTQLS 914
Query: 175 DNSGAVTSNVAANA----GSGTSDVTEHIDLS 202
A+ AA A G T TE +S
Sbjct: 915 LLPRALQRPSAATAQAENGPATPATTEAPKMS 946
Score = 43.9 bits (102), Expect = 0.083, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITE--EDLKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E L+ LF C + +R +N+ G+FRGY +V+F + + AL
Sbjct: 706 VFVSNLPYGLGEPAATLRPLFEACGDVVEVRPIFSNR--GDFRGYCYVEFREEAAALQAL 763
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 764 QLDRQSVEGRPMFVSPCVDKSKNPDFK 790
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE----GYNR 65
+GIA I F +V A+ L G + G+ + +Q +A K + + ++ G R
Sbjct: 194 KGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPMR 253
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+Y+G+L ++ITE+ L+ +F +I +++ + ETG +GY + FSD+ AL +L
Sbjct: 254 LYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQL 313
Query: 124 DQEVVRGRPVKI 135
+ + GRP+K+
Sbjct: 314 NGFELAGRPMKV 325
>gi|359486200|ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Vitis vinifera]
Length = 838
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 67 YIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+I NL + E L+ FSD ++++R +K TG+ RG A+VDFSD L+ A+ ++
Sbjct: 656 FISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNK 715
Query: 126 EVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSN---------DADN 176
+++RG+ + I+ + P +KG K + SN +T S G G SN D+
Sbjct: 716 KMLRGKRLSIARSDPKQKG--KKGSAYRSNHTRQVMITGSKGAGHSNDQTGTVGESDSKE 773
Query: 177 SGAVTSNVAANA 188
SG ++S+ A A
Sbjct: 774 SGQISSSKAPQA 785
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 10 RGIAIINFRT----EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIVEG 62
RG + T E AV++ +G + +G L K P K ++ +RT + P+ E
Sbjct: 150 RGFGFVTMNTVEEAESAVEK---FNGYDYNGRSLVVNKASP-KGSRPERT-ERAPRTFEP 204
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
RIY+ NL+W++ L+++FS+ KI S R ++ETG RG+ V SD ++ A+
Sbjct: 205 VLRIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAI 264
Query: 122 -KLDQEVVRGRPVKISCAVP-PKKG 144
LD + + GR +++S A P++G
Sbjct: 265 AALDGQSLEGRTIRVSVAEDRPRRG 289
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++FS+ S+ ++ LD
Sbjct: 136 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSEKESVRTSMALD 195
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ K GI++ R P
Sbjct: 196 ESLFRGRQIKVGAKRTNKPGISTTDRGFP 224
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DT + RG + T K+A+ + E++G L + A + R + P+ +
Sbjct: 149 DTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVN-IAAPRGSR-PERQPRQYDAA 206
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GNL WD+ + L+++FS+ K+ R ++ETG RG+ V S+ ++ A+
Sbjct: 207 FRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIA 266
Query: 122 KLDQEVVRGRPVKISCAVP-PKKGI 145
LD + + GR +K++ A P++G
Sbjct: 267 ALDGQNLEGRAIKVNVAEERPRRGF 291
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ETG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 314 FELAGRPMKV 323
>gi|50291529|ref|XP_448197.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527508|emb|CAG61148.1| unnamed protein product [Candida glabrata]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNRI 66
K +G ++F+T+ V+ A+ L S+++G L I+ K+ + + +D +RI
Sbjct: 165 KNKGFCYVDFKTQEQVEAAIKLSESQLNGRNLLIKNSKSYEGRPDKTDLVSMSKNPPSRI 224
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T+E L+K F C +I +R T +++G+ +G+A VDF + + ALK D
Sbjct: 225 LFVGNLSFDTTDELLRKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFKNEEGATNALK-D 283
Query: 125 Q--EVVRGRPVKI 135
+ + GRP+++
Sbjct: 284 KSCRKIAGRPLRM 296
>gi|171685940|ref|XP_001907911.1| hypothetical protein [Podospora anserina S mat+]
gi|170942931|emb|CAP68584.1| unnamed protein product [Podospora anserina S mat+]
Length = 543
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F DC ++R ++E +G+A+ +F+D L AL D +
Sbjct: 82 HLGNLSYDATVESVTDFFHDCNCVNVRIIEDREQNRPKGFAYAEFADLEGLKTALTRDGQ 141
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSL 152
GR ++I A PP+ G ++ S
Sbjct: 142 SFEGRNIRIKVADPPRGGFGDRTESF 167
>gi|303314775|ref|XP_003067396.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107064|gb|EER25251.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 549
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D T+ D+ +LF C+++S+R +K T +G+ +V+F+ L AL
Sbjct: 84 HIGNLSFDATQADISELFEACEVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTYQGT 143
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVAA 186
++GR +++S A PPK+ +++ S S K + G D SG A
Sbjct: 144 SLQGRNIRVSVAEPPKERHDARDLSDWSRKGPLPDLPQRRG------PDRSGYAPRGFDA 197
Query: 187 NAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
+ +G S+ GK+R + +E KG L A
Sbjct: 198 TSDAG-SERGGRRPYEPADGKMRDFSTWE--RKGPLPPAA 234
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + FR E A +AL LD ++G + + P +K F
Sbjct: 742 FSNRGDFRGYCYVEFREEAAALQALQLDRQSVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 801
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 802 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESEA 857
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRAT 159
S A LK+D +R +K++ + PP++ + K P +RA+
Sbjct: 858 SQAVLKMDGMTIRENVIKVAISNPPQRKVPEK----PEARRAS 896
Score = 43.9 bits (102), Expect = 0.095, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITE--EDLKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E L+ LF C + +R +N+ G+FRGY +V+F + + AL
Sbjct: 709 VFVSNLPYGLGEPAATLRPLFEACGDVVEVRPIFSNR--GDFRGYCYVEFREEAAALQAL 766
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 767 QLDRQSVEGRPMFVSPCVDKSKNPDFK 793
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++FSD S+ A+ LD
Sbjct: 104 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMALD 163
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 164 ESLFRGRQIKVGVKRTNRPGISTTDRGFP 192
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DT + RG + T ++A+ + + +++G L + KA + + P+ E
Sbjct: 172 DTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVN--KAARRGERPERPPRTFEQS 229
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GN+ W I + L++LFS+ K+ S R ++ETG RG+ V + +S A+
Sbjct: 230 YRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIA 289
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR ++++ A
Sbjct: 290 NLDGQSLDGRTIRVNVA 306
>gi|225682098|gb|EEH20382.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 550
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ + D+ +LF +C+++++R +K T +G+ +V+F+ L AL
Sbjct: 59 HIGNLSFEAAQADISELFKECQVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALTFQGT 118
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDADN 176
++GR +++S A PPK+ ++ S +PS +R V+D G G
Sbjct: 119 SLQGRNIRVSVAEPPKERQETRDFSDWSRKGPLPDVPSQRR----VSDRPGFGARGQ--- 171
Query: 177 SGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
+A S D T GK+R +E KG LS +
Sbjct: 172 ----------DAMSDVGDRTGRRAFEPADGKVRDYGNWE--RKGPLSPSP 209
>gi|432874007|ref|XP_004072426.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Oryzias latipes]
Length = 941
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F G FRG + F + +V AL LD E++G + + P + DF KI +
Sbjct: 717 FGHRGVFRGYCYVQFESPASVTEALKLDRREVEGRPMFVSP--CVDKNKNPDF--KIFK- 771
Query: 63 YN------RIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFS 112
YN +I+I L T+E L+++ CK + +R T + +G +G A+V+F+
Sbjct: 772 YNTSLEKHKIFISGLPLSCTKEQLEEI---CKQQGTVKDVRLVTYR-SGRPKGLAYVEFA 827
Query: 113 DSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSK-SRSLPSNKRATSKVTDSAGLGT 170
D S A LK+D + G + ++ + PP++ +N K S P + S G G
Sbjct: 828 DETQASQAVLKMDGVEIEGHKISVAISNPPRRSVNEKPGSSRPVTDMMPRQNYGSRGKGR 887
Query: 171 SN----------DADNSGAVTSNVAANAGSGTSDVT 196
+ A G V + AA GT + T
Sbjct: 888 TQLSLLPRSLHRQAAGVGKVENGTAAEKMEGTVNTT 923
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 40 KIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEED--LKKLFSDC-KISSLR--F 94
K+ P A++ D ++ + ++I NL++ + E + LK LF C I+ +R F
Sbjct: 658 KVPPGHGDAAEKQIDDKSELRDDCCSVFISNLAFTLQEPEATLKALFESCGSIAQVRPIF 717
Query: 95 GTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G G FRGY +V F S++ ALKLD+ V GRP+ +S V K + K
Sbjct: 718 G---HRGVFRGYCYVQFESPASVTEALKLDRREVEGRPMFVSPCVDKNKNPDFK 768
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE----GYNR 65
+GIA I F +V A+ L G + G+ + +Q +A K + + ++ G R
Sbjct: 167 KGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPMR 226
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+Y+G+L ++ITE+ L+ +F +I +++ + ETG +GY + FSD+ AL +L
Sbjct: 227 LYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQL 286
Query: 124 DQEVVRGRPVKI 135
+ + GRP+K+
Sbjct: 287 NGFELAGRPMKV 298
>gi|396493610|ref|XP_003844097.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
gi|312220677|emb|CBY00618.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
Length = 439
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPK----------- 58
RG A ++F +E A+ A+AL ++MDG L I+ K+ + + PK
Sbjct: 167 RGFAYVDFSSELAMYSAIALTETKMDGRALLIKNAKSFEGRPDK---PKNEDTQDTGRGA 223
Query: 59 --IVEGYN----RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
V+G + R+++GNLS+D+T+EDL+ +S C + + T +++G+ +GYA V F
Sbjct: 224 KGAVKGAHPPNKRVFVGNLSFDVTKEDLEAHYSQCGTVEHIHMATFEDSGKCKGYAWVTF 283
Query: 112 SDSLSLSMALK 122
D + + A+K
Sbjct: 284 GDVDAATCAVK 294
>gi|432874009|ref|XP_004072427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Oryzias latipes]
Length = 923
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F G FRG + F + +V AL LD E++G + + P + DF KI +
Sbjct: 699 FGHRGVFRGYCYVQFESPASVTEALKLDRREVEGRPMFVSP--CVDKNKNPDF--KIFK- 753
Query: 63 YN------RIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFS 112
YN +I+I L T+E L+++ CK + +R T + +G +G A+V+F+
Sbjct: 754 YNTSLEKHKIFISGLPLSCTKEQLEEI---CKQQGTVKDVRLVTYR-SGRPKGLAYVEFA 809
Query: 113 DSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGT 170
D S A LK+D + G + ++ + PP++ +N K P + R + + G+
Sbjct: 810 DETQASQAVLKMDGVEIEGHKISVAISNPPRRSVNEK----PGSSRPVTDMMPRQNYGS 864
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR--FGTNKETGEFRGYAHVDFSDSLSLSMA 120
++I NL++ + E + LK LF C I+ +R FG G FRGY +V F S++ A
Sbjct: 666 VFISNLAFTLQEPEATLKALFESCGSIAQVRPIFGHR---GVFRGYCYVQFESPASVTEA 722
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSK 148
LKLD+ V GRP+ +S V K + K
Sbjct: 723 LKLDRREVEGRPMFVSPCVDKNKNPDFK 750
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVVAKRTNRPGISTTDRGFP 188
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNL +TE+D+++ F++C I+S+R +KETG+ RG A V F+ + AL L
Sbjct: 318 VYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQALTLH 377
Query: 125 QEVVRGRPVKISCA 138
+ ++G+ VKI A
Sbjct: 378 MDDLKGQSVKIRRA 391
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA I F +V A+ L G + G+ + +Q +A K A ++ K G R+Y
Sbjct: 197 KGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANNLQKGNAGPMRLY 256
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F +I S++ + ET +GY + F+D+ AL +L+
Sbjct: 257 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNG 316
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 317 FELAGRPMKV 326
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 48 KAKRTSDFTP----KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGE 102
K K++ TP + G +++GNLS+++ +++K+ F + ++S +RF T + G
Sbjct: 445 KPKQSEPKTPASSGQATTGSKTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATA-DDGS 503
Query: 103 FRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
F+G+AHV+F+ + + A +L+ + GRPV++ A
Sbjct: 504 FKGFAHVEFATTEAAQKAYELNGHDLSGRPVRLDFA 539
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP------- 57
D G F+G A + F T A ++A L+G ++ G +P + A+ TP
Sbjct: 500 DDGSFKGFAHVEFATTEAAQKAYELNGHDLSG-----RPVRLDFARERGAITPGSGRDNS 554
Query: 58 ------KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
+ + R + +L D L++ FS C I + + ETG +G A+V+
Sbjct: 555 SFKKSGQSNTAFVRGFDSSLGEDEIRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVE 614
Query: 111 FSDSLSLSMALKLD 124
F+D SL AL+L+
Sbjct: 615 FTDGNSLPKALELN 628
>gi|226289278|gb|EEH44790.1| translation initiation factor 4B [Paracoccidioides brasiliensis
Pb18]
Length = 608
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ + D+ +LF +C+++++R +K T +G+ +V+F+ L AL
Sbjct: 136 HIGNLSFEAAQADISELFKECQVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALTFQGT 195
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDADN 176
++GR +++S A PPK+ ++ S +PS +R V+D G G
Sbjct: 196 SLQGRNIRVSVAEPPKERQETRDFSDWSRKGPLPDVPSQRR----VSDRPGFGARGQ--- 248
Query: 177 SGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSA 225
+A S D T GK+R +E KG LS +
Sbjct: 249 ----------DALSDVGDRTGRRAFEPADGKVRDYGNWE--RKGPLSPS 285
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K + R + T P +
Sbjct: 229 SGRSKGVGYVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEATSSNPNQI 288
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ + ITE DL+ +F L F +E G RGY V F D
Sbjct: 289 P-FHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKEEQGRSRGYGFVQFRDPSQAR 345
Query: 119 MAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 346 EALEKMNGFDLAGRPIRVGL 365
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F++E AV A+ L G ++ G+ + Q +A K ++ + P+ G
Sbjct: 218 SGRSKGVGYVEFKSEDAVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGNNH 275
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE DL+ +F L F ETG RGY V F D
Sbjct: 276 AAPFHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 333
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 334 REALEKMNGFDLAGRAIRV 352
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV----- 60
T + +GIA + FR + + AL L G+ + G+ ++IQ A K + ++ TP +
Sbjct: 5 TKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSA--TPSLPRPSQQ 62
Query: 61 -EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+G ++YIG+L ++ITEE LK +F KI ++ + T +GY V + +S
Sbjct: 63 NKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAK 122
Query: 119 MAL-KLDQEVVRGRPVKIS 136
AL +L+ + GRP+K++
Sbjct: 123 KALDQLNGFELAGRPMKVN 141
>gi|402580124|gb|EJW74074.1| hypothetical protein WUBG_15018, partial [Wuchereria bancrofti]
Length = 208
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIG 69
+G I+F TE + AL +D +++DG L + YK + ++F N++++
Sbjct: 86 KGFGYIDFSTEPEARNALKMDRTQIDGRPLYVSEYKPHDKGKNAEFRYSTGLERNKVFVN 145
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N+ +D TEE LK++F+ + +R T+K +G+ +G A+V+F + +MA+K
Sbjct: 146 NVHYDATEEQLKEIFTIFGAVRDIRIVTHK-SGKSKGCAYVEFENDNDAAMAVK 198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 35 DGLFLKIQPYKATKAKRTS--DF-----TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC 87
DG + P +++K K TS D + + E + +++ NL + + E LK++F +
Sbjct: 12 DGFVVPQLPSQSSKPKTTSSQDLGLQGTSEEASEKRHTVFVSNLDFKLPTERLKEIFPNA 71
Query: 88 KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINS 147
K +R + +G+ ++DFS ALK+D+ + GRP+ +S P KG N+
Sbjct: 72 K--EIRLVYRGMSKLHKGFGYIDFSTEPEARNALKMDRTQIDGRPLYVSEYKPHDKGKNA 129
Query: 148 KSR 150
+ R
Sbjct: 130 EFR 132
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-K 122
R+Y+GNLSW++ + L+++FS+ K+ S R ++ETG RG+ V SD ++ A+
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 123 LDQEVVRGRPVKISCAVP-PKKG 144
LD +++ GR +K+S A P++G
Sbjct: 267 LDGQILEGRTIKVSVAEDRPRRG 289
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K + RT++ T P + ++
Sbjct: 221 KGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIP-FH 279
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F + G RGY V + ++ AL
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALE 337
Query: 122 KLDQEVVRGRPVKI 135
K++ + GRP+++
Sbjct: 338 KMNGFDLAGRPIRV 351
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN- 64
+G+ +G+ + F++E +V A+ L G ++ G+ + Q +A K ++ + P+ G+N
Sbjct: 213 SGRSKGVGYVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGHNH 270
Query: 65 -----RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
R+Y+GN+ + ITE DL+ +F L F ETG RGY V F D
Sbjct: 271 AAPFHRLYVGNIHFSITENDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 328
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 329 REALEKMNGFDLAGRAIRV 347
>gi|237838475|ref|XP_002368535.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|211966199|gb|EEB01395.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|221505826|gb|EEE31471.1| nucleolar phosphoprotein, putative [Toxoplasma gondii VEG]
Length = 705
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 27/157 (17%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKI---------QPYKATKAKRTSDFT---- 56
+GIA I F TE A ++A+ + ++ +G L+I QP + R
Sbjct: 480 KGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQPGGGDRGGRGGRGGRDQG 539
Query: 57 ------------PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEF 103
PK +I + NLS++ TEE ++ LF +C +I +R ++TG+F
Sbjct: 540 NGRGGGAAGGDRPK-ASPNKQIVVRNLSFNATEESIRSLFEECGEIQEVRMPVFEDTGKF 598
Query: 104 RGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+G A ++F S + A++ + V GR V I A+P
Sbjct: 599 KGQAFIEFDSIESATKAVEYNNTDVDGRTVWIDFALP 635
>gi|145345758|ref|XP_001417367.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577594|gb|ABO95660.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 284
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
EG +++GNL++ I ++ + K F D ++R+ TNKETGEFRG DFS + +
Sbjct: 199 EGCYTLFMGNLNFQIDDDTIYKFFMDGAGVGPHTIRWLTNKETGEFRGVGFADFSGA-EI 257
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKG 144
A KL E GRP+++ P +G
Sbjct: 258 DAAAKLHGEKCMGRPIRLDWQAPSNRG 284
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
+Y+GNL+W I E L + F+DC +I S+ + K TG+F G V+F
Sbjct: 93 HVYMGNLAWTIDEAALGEAFADCGEIVSVNWFEEKATGKFLGAGVVEF 140
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 9/133 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDF--TPKIVEGYNR 65
+G+ + F++E V +AL L G ++ G+ + +Q +A K + RT++ T ++R
Sbjct: 226 KGVGYVEFKSEDTVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRTTEAAGTQSNSIPFHR 285
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL-K 122
+Y+GN+ +++TE+DL+ +F L F +TG RGY V + D+ AL K
Sbjct: 286 LYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDTGRSRGYGFVQYRDAGQAREALEK 343
Query: 123 LDQEVVRGRPVKI 135
++ + GRP+++
Sbjct: 344 MNGFDLAGRPIRV 356
>gi|295661797|ref|XP_002791453.1| translation initiation factor 4B [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280010|gb|EEH35576.1| translation initiation factor 4B [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 533
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS++ + D+ +LF +C+++++R +K T +G+ +V+F+ L AL
Sbjct: 44 HIGNLSFEAAQADISELFKECQVTNVRIVEDKMTRAPKGFGYVEFATLEGLKKALTFQGT 103
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS----------LPSNKRATSKVTDSAGLGTSNDADN 176
++GR +++S A PPK+ ++ S +PS +R V+D G G
Sbjct: 104 SLQGRNIRVSVAEPPKERQETRDFSDWSRKGPLPDVPSQRR----VSDRPGFGARGQ--- 156
Query: 177 SGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
+A S D T GK+R +E KG LS +
Sbjct: 157 ----------DAMSDVGDRTGRRAFEPADGKVRDYGNWE--RKGPLSPSP 194
>gi|115387941|ref|XP_001211476.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195560|gb|EAU37260.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T D+ LF++C ++++R +K T +G+ +V+F L AL L
Sbjct: 82 HVGNLSFDATSADISDLFAECGVTNVRIVEDKLTRSPKGFGYVEFETVDGLKKALDLSGA 141
Query: 127 VVRGRPVKISCAVPPKK 143
++GR +++S A PPK+
Sbjct: 142 TLQGRAIRVSIAEPPKE 158
>gi|221484195|gb|EEE22491.1| nucleolar phosphoprotein, putative [Toxoplasma gondii GT1]
Length = 705
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 27/157 (17%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKI---------QPYKATKAKRTSDFT---- 56
+GIA I F TE A ++A+ + ++ +G L+I QP + R
Sbjct: 480 KGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQPGGGDRGGRGGRGGRDQG 539
Query: 57 ------------PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEF 103
PK +I + NLS++ TEE ++ LF +C +I +R ++TG+F
Sbjct: 540 NGRGGGAAGGDRPK-ASPNKQIVVRNLSFNATEESIRSLFEECGEIQEVRMPVFEDTGKF 598
Query: 104 RGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+G A ++F S + A++ + V GR V I A+P
Sbjct: 599 KGQAFIEFDSIESATKAVEYNNTDVDGRTVWIDFALP 635
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVGAKRTNRPGISTTDRGFP 188
>gi|50306903|ref|XP_453427.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642561|emb|CAH00523.1| KLLA0D08206p [Kluyveromyces lactis]
Length = 391
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 1 MTFPDTGKFR--GIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---PYKATKAKRTSDF 55
+T D K R G A I+F+TE ++ + L S ++G L I+ Y+ K +D
Sbjct: 160 LTKNDNKKLRNKGFAYIDFKTEKQMEAVVGLSESALNGRNLLIKNAGSYEGRPDK--NDL 217
Query: 56 TPKIVEGYNRI-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
+RI ++GNLS+D TE+ L+K F C +I +R T ++TG+ +G+A +DF D
Sbjct: 218 VAASKNPPSRILFVGNLSFDTTEDLLRKHFQHCGEIMRIRMATFEDTGKCKGFAFIDFKD 277
Query: 114 SLSLSMALK 122
+ ALK
Sbjct: 278 ETGATNALK 286
>gi|358379936|gb|EHK17615.1| hypothetical protein TRIVIDRAFT_80616 [Trichoderma virens Gv29-8]
Length = 556
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F+DC + S+R ++E +G+ +V+F + L AL LD +
Sbjct: 80 HLGNLSYDATSESVTDFFADCDVVSVRIIEDRELQRPKGFGYVEFGNLDGLKKALTLDGQ 139
Query: 127 VVRGRPVKISCAVPP 141
GR +KI A PP
Sbjct: 140 SFEGRMIKIKVADPP 154
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIVEGYN 64
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K + RT++ T P + ++
Sbjct: 221 KGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIP-FH 279
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ +++TE+DL+ +F L F + G RGY V + ++ AL
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFE--PFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALE 337
Query: 122 KLDQEVVRGRPVKI 135
K++ + GRP+++
Sbjct: 338 KMNGFDLAGRPIRV 351
>gi|169617435|ref|XP_001802132.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
gi|111059820|gb|EAT80940.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
Length = 450
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 15/128 (11%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK-------------RTSDFT 56
+G A ++F TE A+ A+AL ++MDG L I+ K+ + + R +
Sbjct: 179 KGFAYVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKEEQEQDTGRGAKGA 238
Query: 57 PKIVEGYN-RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
K N R+++GNLS+D+T+E+L+ +S C I +L T +++G+ +GYA V F D
Sbjct: 239 VKSAHPPNKRVFVGNLSFDVTKEELQVHYSQCGPIENLHMATFEDSGKCKGYAWVTFGDV 298
Query: 115 LSLSMALK 122
+ + A+K
Sbjct: 299 EAATSAVK 306
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
NRIYIG+++W++TEE ++ +FS KI S N ETG+ +GY +DF + S AL
Sbjct: 622 NRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSADDALA 681
Query: 123 LDQEVVRGRPVKI 135
++ + GR +K+
Sbjct: 682 MNGFELLGRAMKV 694
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
R+YIGNL + + E+ + + FS + S+ G + G+ +GYA +++ S + A++
Sbjct: 464 RVYIGNLHFSLAEDAIIQAFSQFGTVKSILLGKDA-NGKSKGYAFIEYESPDSATKAIES 522
Query: 123 LDQEVVRGRPVKIS 136
+ V+ GR +K++
Sbjct: 523 MSNYVMAGRVIKVN 536
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 18/149 (12%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI--------QPYKATKAKRTSDF 55
+TGK RG + F +V++A+ ++G E+DG + + + +AK D
Sbjct: 379 NTGKSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDS 438
Query: 56 T--PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
T P V +++GNLSWD TE+ + + F + ++ S+R T++E+G +G+ +V+F
Sbjct: 439 TSAPSSV-----LFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFV 493
Query: 113 DSLSLSMALK-LDQEVVRGRPVKISCAVP 140
D + A + L + GR +++ + P
Sbjct: 494 DVDAAKAAFEALSGTEIGGRSIRLDYSQP 522
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
I++G LSW++ ++ L F++C ++ S R ++ TG+ RG+ HV+F+D+ S+ A+ +
Sbjct: 345 IFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQKAIDTM 404
Query: 124 DQEVVRGRPVKISCA 138
+ + + GRPV + A
Sbjct: 405 NGKEIDGRPVNVDRA 419
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ---PYKATKAKRTSD----FT 56
+TG+ +G + F T +A A + E+DG L + P + A +T+D +
Sbjct: 270 ETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYG 329
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
K N +++GNLS+D T + ++++F++ I+ + T+++TG +G+ +VDF
Sbjct: 330 DKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQE 389
Query: 116 SLSMALK-LDQEVVRGRPVKISCAVP 140
+ AL L+ + + GR ++I A P
Sbjct: 390 EATAALDALNGQDIAGRNIRIDYAAP 415
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
P EG +++GNLSW+I E+ L++ F +I R T++ETG +G+ +V+F+ S
Sbjct: 227 PAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSA 286
Query: 116 SLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS----------RSLPSN 155
+ A ++ Q + GRP+ + + P +K K+ RS PSN
Sbjct: 287 DAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYGDKRSAPSN 337
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F+ E +V A+ L G + G+ + Q +A K + R + T P +
Sbjct: 214 SGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEATTSNPNQI 273
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ + ITE DL+ +F L F +E G RGY V F D
Sbjct: 274 P-FHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAR 330
Query: 119 MAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 331 EALEKMNGFDLAGRPIRV 348
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 227 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 286
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 287 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 346
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 347 LEKMNGFDLAGRPIRVGL 364
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + +K +G +G+A+++F+D S+ A+ LD
Sbjct: 123 IYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALD 182
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNS 177
+ + RGR +K+ + GI++ +R A + TD + T+ D S
Sbjct: 183 ESLFRGRQIKVMTKRTNRPGISTTNRPPXPKGFAYIEFTDKDSIQTAMALDES 235
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 226 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 285
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 286 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 345
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 346 LEKMNGFDLAGRPIRVGL 363
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 227 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 286
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 287 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 346
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 347 LEKMNGFDLAGRPIRVGL 364
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVGAKRTNRPGISTTDRGFP 188
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVGAKRTNRPGISTTDRGFP 188
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV----- 60
T + +GIA + FR + + AL L G+ + G+ ++IQ A K + ++ TP +
Sbjct: 5 TKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSA--TPSLPRPSQQ 62
Query: 61 -EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
G ++YIG+L ++ITEE LK +F KI ++ + T +GY V + +S
Sbjct: 63 NRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAK 122
Query: 119 MAL-KLDQEVVRGRPVKIS 136
AL +L+ + GRP+K++
Sbjct: 123 KALDQLNGFELAGRPMKVN 141
>gi|189199124|ref|XP_001935899.1| translation initiation factor eIF4B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982998|gb|EDU48486.1| translation initiation factor eIF4B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 527
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D+ F+DC+++++R +K + +G+ +V+F L AL L
Sbjct: 77 HLGNLSFDATEGDVNDFFADCEVTNVRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGT 136
Query: 127 VVRGRPVKISCAVPPK 142
+GR +++S A PPK
Sbjct: 137 PFQGRNIRVSVAEPPK 152
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 242 SGRSKGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 301
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 302 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 361
Query: 121 L-KLDQEVVRGRPVKI 135
L K++ + GRP+++
Sbjct: 362 LEKMNGFDLAGRPIRV 377
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++FSD S+ +L LD
Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALD 224
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 225 ESLFRGRQIKVVPKRTNRPGISTTDRGFP 253
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ + G ++ G+ + Q +A K ++ +
Sbjct: 206 SGRSKGVGYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPEASTSHHNSV 265
Query: 63 -YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE+DL+ +F L F ETG RGY V F D
Sbjct: 266 PFHRLYVGNIHFSITEQDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQARE 323
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 324 ALEKMNGFDLAGRPIRV 340
>gi|19112520|ref|NP_595728.1| translation initiation factor (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12230560|sp|O14369.1|SCE3_SCHPO RecName: Full=Probable RNA-binding protein sce3
gi|2293058|emb|CAA03989.1| putative RNA-binding protein [Schizosaccharomyces pombe]
gi|3006181|emb|CAA18401.1| translation initiation factor (predicted) [Schizosaccharomyces
pombe]
Length = 388
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D+TE DL F + ++S+R + T RG+ +V+F + +LS AL L E
Sbjct: 97 HVGNLSFDLTENDLGDFFGEG-VTSIRLVIDPLTERSRGFGYVEFETADTLSAALALSGE 155
Query: 127 VVRGRPVKISCAVP 140
+ GRPV+I+ A P
Sbjct: 156 DLMGRPVRITVAEP 169
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG ++ T E A K E+DG L + KA + P++ E
Sbjct: 184 ETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVN--KAAPRGSQPERPPRVFEPA 241
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL WD+ L+++FS+ K+ R ++ETG RG+ V S L A+
Sbjct: 242 FRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIA 301
Query: 122 KLDQEVVRGRPVKISCA 138
D + + GR ++++ A
Sbjct: 302 ATDGQTLDGRTIRVNVA 318
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVGAKRTNRPGISTTDRGFP 188
>gi|189204223|ref|XP_001938447.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985546|gb|EDU51034.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S++++++DL LF D + + +R ++ TG+ RG+AH DF D S + A + L
Sbjct: 228 LFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASATKAKEVL 287
Query: 124 DQEVVRGRPVKISCAVP 140
++V+ GR ++I + P
Sbjct: 288 SEKVIYGRQLRIDYSKP 304
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+YIGNL +++T + LK++FS ++ S++ + G RG+ +V+F++ A+ L
Sbjct: 131 LYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNR-GLSRGFGYVEFANMADAQAAIDNL 189
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRS 151
D +V GR + + P NS SR+
Sbjct: 190 DMQVFEGRNMVVQYHQPKP---NSMSRN 214
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++FSD S+ +L LD
Sbjct: 63 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALD 122
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
+ + RGR +K+ + GI++ R P +
Sbjct: 123 ESLFRGRQIKVIPKRTNRPGISTTDRGFPRTR 154
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV----- 60
T + +GIA + FR + + AL L G+ + G+ ++IQ A K + ++ TP +
Sbjct: 141 TKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSA--TPSLPRPSQQ 198
Query: 61 -EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+G ++YIG+L ++ITEE LK +F KI ++ + T +GY V + +S
Sbjct: 199 NKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAK 258
Query: 119 MAL-KLDQEVVRGRPVKIS 136
AL +L+ + GRP+K++
Sbjct: 259 KALDQLNGFELAGRPMKVN 277
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVVAKRTNRPGISTTDRGFP 188
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 15 INFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWD 74
+ F+ E + K AL L+G ++ L++ +TK K D K +++GN+ +D
Sbjct: 395 VAFKEEQSAKDALKLNGHKLGENTLRVD--LSTKNK---DHDQK-----RAVFLGNIPFD 444
Query: 75 ITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPV 133
ITE++++K F C KI S+R ++++G RG +V+F + S+++AL+L+ ++ R +
Sbjct: 445 ITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFENQDSVTLALELNGTNLKNREI 504
Query: 134 KISCAVP 140
++ P
Sbjct: 505 RVQICSP 511
>gi|317035924|ref|XP_001397207.2| translation initiation factor 4B [Aspergillus niger CBS 513.88]
Length = 478
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 81 HVGNLSFDATAADISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 140
Query: 127 VVRGRPVKISCAVPPKK 143
++GR ++ S A PPK+
Sbjct: 141 TLQGRAIRTSIAEPPKE 157
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++FSD S+ +L LD
Sbjct: 164 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALD 223
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 224 ESLFRGRQIKVVPKRTNRPGISTTDRGFP 252
>gi|350636524|gb|EHA24884.1| hypothetical protein ASPNIDRAFT_123074 [Aspergillus niger ATCC
1015]
Length = 437
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 22 HVGNLSFDATAADISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 81
Query: 127 VVRGRPVKISCAVPPKK 143
++GR ++ S A PPK+
Sbjct: 82 TLQGRAIRTSIAEPPKE 98
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C I+ + NK G +G+A+++F+D S++ A+ +D
Sbjct: 114 VYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMD 173
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
+ RGR +K++ K GI++ +R + S RA
Sbjct: 174 DSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRA 207
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L++ F C ++ + +K TG +G+A+V+F+D S++ A LD
Sbjct: 103 VYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFTGHPKGFAYVEFADKDSVTTAQALD 162
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ + RGR +K+S + GI+S +R
Sbjct: 163 ESLFRGRQIKVSAKRTNRPGISSTNR 188
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFT---PKIV 60
+G+ +G+ + F+ E +V A+ L G + G+ + Q +A K + R + T P +
Sbjct: 214 SGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEATTSNPNQI 273
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+ +F +E G RGY V F D A
Sbjct: 274 P-FHRLYVGNIHFSITEADLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAREA 332
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 333 LEKMNGFDLAGRPIRVGL 350
>gi|219127948|ref|XP_002184187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404418|gb|EEC44365.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 330
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 29/163 (17%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP--- 57
+T +TGKF G A I T + +A+A+ GS++ G LK+ R D P
Sbjct: 171 ITDKETGKFYGSAFIEMETSISAAKAVAMAGSQLMGRPLKVN----FAPSRPGDIWPPVK 226
Query: 58 KIVEG--------------------YNRIYIGNLSWDITEEDLKKLFSDCK--ISSLRFG 95
K++ G +++ GN S++I ++ + K F + + + ++R+
Sbjct: 227 KVISGGSTGQAGGSGIKAMSEKPETCTKLFAGNCSYEIDDDAITKFFGNVESEVKAVRWL 286
Query: 96 TNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
+K++G+F+G +V+F ++ + A L+ + + GRP+++ A
Sbjct: 287 HHKDSGDFKGCGYVEFWNTEACEKAATLNGKTLLGRPIRLDWA 329
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+++GNL + + E L+ F ++ +++ T+KETG+F G A ++ S+S + A+
Sbjct: 139 GVTRLFLGNLPFAVDEASLEA-FLPAHVTHIKWITDKETGKFYGSAFIEMETSISAAKAV 197
Query: 122 KLDQEVVRGRPVKISCA-------VPPKKGINS 147
+ + GRP+K++ A PP K + S
Sbjct: 198 AMAGSQLMGRPLKVNFAPSRPGDIWPPVKKVIS 230
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F+D S+ A+ LD
Sbjct: 100 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 160 ESLFRGRQIKVVAKRTNRPGISTTDRGFP 188
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 7 GKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPY--KATKAKRTSDFTPKIVEGY 63
G RG A + F + A + A++ ++ S +G + + Y + + A RT + E
Sbjct: 154 GMSRGFAYVQFDSVEAAEAAISEMNMSIYEGRRIVVN-YSTRNSAAPRT-----RASEPT 207
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++IGNLS+++T+ +L LF D + +R +K TG RG+AH DF D S A++
Sbjct: 208 KTLFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLDVESAKAAME 267
Query: 123 -LDQEVVRGRPVKISCAVPPKKGINSKSR 150
L ++ GRP+++ ++ K + S++R
Sbjct: 268 ILKEKAPYGRPLRLDYSLNTKDMLASQNR 296
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 242 SGRSKGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 301
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 302 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 361
Query: 121 L-KLDQEVVRGRPVKI 135
L K++ + GRP+++
Sbjct: 362 LEKMNGFDLAGRPIRV 377
>gi|358374899|dbj|GAA91487.1| translation initiation factor 4B [Aspergillus kawachii IFO 4308]
Length = 496
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 82 HVGNLSFDATAADISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 141
Query: 127 VVRGRPVKISCAVPPKK 143
++GR ++ S A PPK+
Sbjct: 142 TLQGRSIRTSIAEPPKE 158
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + +
Sbjct: 238 SGRSKGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNS 297
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D A
Sbjct: 298 IPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAREA 357
Query: 121 L-KLDQEVVRGRPVKISC 137
L K++ + GRP+++
Sbjct: 358 LEKMNGFDLAGRPIRVGL 375
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C I+ + NK G +G+A+++F+D S++ A+ +D
Sbjct: 114 VYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMD 173
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
+ RGR +K++ K GI++ +R + S RA
Sbjct: 174 DSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRA 207
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + T+K TG +G+A+++F+D S+ A+ LD
Sbjct: 93 IYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIEFADKESVQTAMALD 152
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV 162
+ + RGR +K+ + G+++ +R + R ++V
Sbjct: 153 ESLFRGRQIKVCPKRTNRPGVSTTNRPPRARGRGGARV 190
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + NK G +G+A+++F D S+ A+ +D
Sbjct: 100 IYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ + RGRP+K+ + G+++ +R
Sbjct: 160 ESLFRGRPIKVMPKRTNRPGLSTTNR 185
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
TP G +++GNLS+ + D++K F DC ++ +RF +++E G F+G+ HV+F+ +
Sbjct: 368 TPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEE-GRFKGFGHVEFASA 426
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
+ AL+++ + + R V++ A
Sbjct: 427 EAAQSALEMNGQELLQRAVRLDLA 450
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
+ G+F+G + F + A + AL ++G E+ +++ A+ FTP Y+
Sbjct: 411 EEGRFKGFGHVEFASAEAAQSALEMNGQELLQRAVRLD-----LARERGAFTPNNNSNYS 465
Query: 65 --------------RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK--ETGEFRGYAH 108
R + NL D L + F R K E+G +G+A+
Sbjct: 466 AQSGGRGQSQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAY 525
Query: 109 VDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+DF DS S S AL+L + + G + + A P
Sbjct: 526 MDFKDSDSFSKALELHESELDGYQLSVDEAKP 557
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
TP G +++GNLS+ + D++K F DC ++ +RF +++E G F+G+ HV+F+ +
Sbjct: 356 TPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEE-GRFKGFGHVEFASA 414
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
+ AL+++ + + R V++ A
Sbjct: 415 EAAQSALEMNGQELLQRAVRLDLA 438
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
+ G+F+G + F + A + AL ++G E+ +++ A+ FTP Y+
Sbjct: 399 EEGRFKGFGHVEFASAEAAQSALEMNGQELLQRAVRLD-----LARERGAFTPNNNSNYS 453
Query: 65 --------------RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK--ETGEFRGYAH 108
R + NL D L + F R K E+G +G+A+
Sbjct: 454 AQSGGRGQSQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAY 513
Query: 109 VDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+DF DS S S AL+L + + G + + A P
Sbjct: 514 MDFKDSDSFSKALELHESELDGYQLSVDEAKP 545
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + NK G +G+A+++F D S+ A+ +D
Sbjct: 100 IYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQTAMAMD 159
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ + RGRP+K+ + G+++ +R
Sbjct: 160 ESLFRGRPIKVMPKRTNRPGLSTTNR 185
>gi|119175208|ref|XP_001239872.1| hypothetical protein CIMG_09493 [Coccidioides immitis RS]
gi|392870065|gb|EAS28622.2| translation initiation factor 4B [Coccidioides immitis RS]
Length = 549
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGNLS+D ++ D+ +LF C+++S+R +K T +G+ +V+F+ L AL
Sbjct: 84 HIGNLSFDASQADISELFEACEVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTYQGT 143
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVAA 186
++GR +++S A PPK+ +++ S S K + G D SG A
Sbjct: 144 SLQGRNIRVSVAEPPKERHDARDLSDWSRKGPLPDLPQRRG------PDRSGYAPRGFDA 197
Query: 187 NAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSAC 226
+ +G S+ GK+R + +E KG L A
Sbjct: 198 TSDAG-SERGGRRPYEPADGKMRDFSTWE--RKGPLPPAA 234
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG ++ T E A K E+DG L + KA + P++ E
Sbjct: 163 ETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVN--KAAPRGSQPERPPRVFEPA 220
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL WD+ L+++FS+ K+ R ++ETG RG+ V S L A+
Sbjct: 221 FRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIA 280
Query: 122 KLDQEVVRGRPVKISCA 138
D + + GR ++++ A
Sbjct: 281 ATDGQTLDGRTIRVNVA 297
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
TP G +++GNLS+ + D++K F DC ++ +RF +++E G F+G+ HV+F+ +
Sbjct: 376 TPIENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEE-GRFKGFGHVEFASA 434
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
+ AL+++ + + R V++ A
Sbjct: 435 EAAQSALEMNGQELLQRAVRLDLA 458
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
+ G+F+G + F + A + AL ++G E+ +++ A+ FTP Y+
Sbjct: 419 EEGRFKGFGHVEFASAEAAQSALEMNGQELLQRAVRLD-----LARERGAFTPNNNSNYS 473
Query: 65 --------------RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK--ETGEFRGYAH 108
R + NL D L + F R K E+G +G+A+
Sbjct: 474 AQSGGRGQSQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAY 533
Query: 109 VDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
+DF DS S S AL+L + + G + + A P
Sbjct: 534 MDFKDSDSFSKALELHESELDGYQLSVDEAKP 565
>gi|317148014|ref|XP_001822446.2| translation initiation factor 4B [Aspergillus oryzae RIB40]
Length = 496
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D T D+ LF DC ++++R +K T +G+ +V+F L AL L
Sbjct: 84 HVGNLAFDATSADISDLFVDCAVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 143
Query: 127 VVRGRPVKISCAVPPKK 143
++GR +++S A PPK+
Sbjct: 144 TLQGRTIRVSIAEPPKE 160
>gi|238502623|ref|XP_002382545.1| translation initiation factor 4B [Aspergillus flavus NRRL3357]
gi|220691355|gb|EED47703.1| translation initiation factor 4B [Aspergillus flavus NRRL3357]
Length = 493
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D T D+ LF DC ++++R +K T +G+ +V+F L AL L
Sbjct: 81 HVGNLAFDATSADISDLFVDCAVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 140
Query: 127 VVRGRPVKISCAVPPKK 143
++GR +++S A PPK+
Sbjct: 141 TLQGRTIRVSIAEPPKE 157
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKAT----KAKRTSDF 55
+ + + G RG + F++ + A+ LD +G L +Q ++A + KR +F
Sbjct: 160 IVYDNRGMSRGFGYVEFKSIDDAQTAIDNLDMQVFEGRNLVVQYHRAKSDSDRPKR--EF 217
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDS 114
P + ++IGN+S++++++DL LF D + ++ +R ++ TG+ RG+AH DF D
Sbjct: 218 PPANLPSKT-LFIGNMSFEMSDKDLNDLFRDIRNVNDVRVAIDRRTGQPRGFAHADFLDV 276
Query: 115 LSLSMALK-LDQEVVRGRPVKI 135
S + A + L + + GR +++
Sbjct: 277 ASATKAKEILSAKTIYGRELRV 298
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+N +YIGNL +++T E L+K+FS +++S++ + G RG+ +V+F A+
Sbjct: 128 HNTLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDNR-GMSRGFGYVEFKSIDDAQTAI 186
Query: 122 -KLDQEVVRGR 131
LD +V GR
Sbjct: 187 DNLDMQVFEGR 197
>gi|396476405|ref|XP_003840015.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
gi|312216586|emb|CBX96536.1| hypothetical protein LEMA_P108010.1 [Leptosphaeria maculans JN3]
Length = 594
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D+ FS C+++++R +K + +G+ +V+F L AL L
Sbjct: 140 HLGNLSFDATEGDVNDFFSGCEVTNVRIVEDKLDRKPKGFGYVEFGSVEGLKKALDLSGS 199
Query: 127 VVRGRPVKISCAVPPKKGINSKS----------RSLPSNKRATSKVTDSAGLGTSND 173
+GR V++S A PPK + ++ LP +R + + G G+ D
Sbjct: 200 QFQGRNVRVSVAEPPKDRVEAREITDWTRKGPLPDLPGQRRPSER----GGFGSGRD 252
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------------PYKATKAK 50
D+G+ RG ++F A ++A +E +G FL+ + P A A+
Sbjct: 332 DSGRSRGFGYVDFENPDAAEKAY----NEKNGAFLQGREMRLDFASKPNADAPPSARAAE 387
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
R I + +++GNL + E+ + K F+ K+ SLR T++E+G +G+A+V
Sbjct: 388 RARKHGDVISPESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYV 447
Query: 110 DFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
FS A + L+ + GRPV++ A P
Sbjct: 448 TFSSVEDAKKAFETLNGSDLDGRPVRLDYAKP 479
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K A + + G R+Y
Sbjct: 208 KGIAYVEFVDSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMASMLQRGGAGPMRLY 267
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + ETG +GY + F+D+ AL +L+
Sbjct: 268 VGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG 327
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 328 FELAGRPMKV 337
>gi|83771181|dbj|BAE61313.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871051|gb|EIT80217.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 495
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D T D+ LF DC ++++R +K T +G+ +V+F L AL L
Sbjct: 83 HVGNLAFDATSADISDLFVDCAVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 142
Query: 127 VVRGRPVKISCAVPPKK 143
++GR +++S A PPK+
Sbjct: 143 TLQGRTIRVSIAEPPKE 159
>gi|71017595|ref|XP_759028.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
gi|46098750|gb|EAK83983.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
Length = 403
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+++GN+ +D++EE L +F + K+ R ++ETG+F+GY +F D + + A++ L
Sbjct: 11 VFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPETAASAVRNL 70
Query: 124 DQEVVRGRPVKISCA 138
++ V GRP++IS A
Sbjct: 71 NEVEVGGRPLRISFA 85
>gi|166797005|gb|AAI59117.1| Sart3 protein [Danio rerio]
Length = 952
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F G FRG + F AV AL +D E+DG + + P K F K
Sbjct: 724 FTAKGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFKVFKYKTSM 783
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++I+I L + T+E L+ L CK I ++R TN+ +G+ +G A+V+F D
Sbjct: 784 EKHKIFISGLPYSATKETLEDL---CKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQA 839
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
S A LK+D ++ + ++ + PP G K + PS
Sbjct: 840 SQAVLKMDGTMLENFTLSVAISNPP--GRRMKDEAAPS 875
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDIT--EEDLKKLFSDCKISSLRFGTNKE 99
QP+ K +R + N +++ NL++++ E L+ LF C
Sbjct: 676 QPHDMPKEQRKDE---------NCVFVSNLTFNMEDPEGKLRTLFQGCGTIQQVRPVFTA 726
Query: 100 TGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G FRGY +V F D L++ ALK+D++ V GRP+ +S V K + K
Sbjct: 727 KGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFK 775
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV----- 60
T + +GIA + FR + + AL L G+ + G+ ++IQ A K + ++ TP +
Sbjct: 141 TKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSA--TPSLPRPSQQ 198
Query: 61 -EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
G ++YIG+L ++ITEE LK +F KI ++ + T +GY V + +S
Sbjct: 199 NRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAK 258
Query: 119 MAL-KLDQEVVRGRPVKIS 136
AL +L+ + GRP+K++
Sbjct: 259 KALDQLNGFELAGRPMKVN 277
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 43 PYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETG 101
P + + +++ + +P+ + +++ LS I + DL+ F+ KI +R + +T
Sbjct: 84 PSRTERRQKSPELSPEERDART-VFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTK 142
Query: 102 EFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+G A+V+F + S +AL L + G P++I + K + S + SLP
Sbjct: 143 RSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRV-SATPSLP 193
>gi|190338766|gb|AAI63594.1| Squamous cell carcinoma antigen recognised by T cells 3 [Danio
rerio]
Length = 951
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F G FRG + F AV AL +D E+DG + + P K F K
Sbjct: 723 FTAKGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFKVFKYKTSM 782
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++I+I L + T+E L+ L CK I ++R TN+ +G+ +G A+V+F D
Sbjct: 783 EKHKIFISGLPYSATKETLEDL---CKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQA 838
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
S A LK+D ++ + ++ + PP G K + PS
Sbjct: 839 SQAVLKMDGTMLENFTLSVAISNPP--GRRMKDEAAPS 874
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDIT--EEDLKKLFSDCKISSLRFGTNKE 99
QP+ K +R + N +++ NL++++ E L+ LF C
Sbjct: 675 QPHDMPKEQRKDE---------NCVFVSNLTFNMEDPEGKLRTLFQGCGTIQQVRPVFTA 725
Query: 100 TGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G FRGY +V F D L++ ALK+D++ V GRP+ +S V K + K
Sbjct: 726 KGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFK 774
>gi|154283681|ref|XP_001542636.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410816|gb|EDN06204.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 318
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGNLS+++T+ +L LF D + +R +K TG RG+AH DF D S A++ L
Sbjct: 203 LFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLDVESAKAAMEIL 262
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSR 150
++ GRP+++ ++ K + S++R
Sbjct: 263 KEKAPYGRPLRLDYSLNTKDMLASQNR 289
>gi|71834402|ref|NP_001025289.1| squamous cell carcinoma antigen recognized by T-cells 3 [Danio
rerio]
Length = 951
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F G FRG + F AV AL +D E+DG + + P K F K
Sbjct: 723 FTAKGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFKVFKYKTSM 782
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++I+I L + T+E L+ L CK I ++R TN+ +G+ +G A+V+F D
Sbjct: 783 EKHKIFISGLPYSATKETLEDL---CKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQA 838
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
S A LK+D ++ + ++ + PP G K + PS
Sbjct: 839 SQAVLKMDGTMLENFTLSVAISNPP--GRRMKDEAAPS 874
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDIT--EEDLKKLFSDCKISSLRFGTNKE 99
QP+ K +R + N +++ NL++++ E L+ LF C
Sbjct: 675 QPHDMPKEQRKDE---------NCVFVSNLTFNMEDPEGKLRTLFQGCGTIQQVRPVFTA 725
Query: 100 TGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G FRGY +V F D L++ ALK+D++ V GRP+ +S V K + K
Sbjct: 726 KGTFRGYCYVQFEDRLAVPEALKMDRQEVDGRPMYVSPCVDKNKNPDFK 774
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 73/131 (55%), Gaps = 16/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RIYIG 69
A I F +E + K+AL+++G++ +G ++++ D + K + Y ++IG
Sbjct: 403 AYIRFESEESTKKALSINGTKFEGNYVRV------------DMSTKSNDKYETKKSVFIG 450
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL +++ ++ ++ F C +I S+R + +TG +G+ +V+F ++++AL+LD +
Sbjct: 451 NLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDGTTI 510
Query: 129 RGRPVKISCAV 139
R V++ +
Sbjct: 511 LNREVRVKPNI 521
>gi|255952933|ref|XP_002567219.1| Pc21g01490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588930|emb|CAP95046.1| Pc21g01490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 495
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T+ D+ + FS C ++S+R +K T +G+ +V+F L AL L
Sbjct: 83 HVGNLSFEATDADISEFFSGCGVTSVRLVEDKLTKAPKGFGYVEFETVEGLKKALDLSGS 142
Query: 127 VVRGRPVKISCAVPPKKG-INSK----SRSLPSNKRATSKVTDSAGLGTSNDA 174
+GR ++ S A PPK+ + K SR P + +V D + G DA
Sbjct: 143 SFQGRSIRTSVAEPPKESRLEGKDLDWSRRGPLPELPQRRVPDRSSFGRGMDA 195
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN- 64
T +F+GIA I F+ +V AL L G + G+ + +Q +A K + + P +
Sbjct: 242 TKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMANQPPPAPPKNPAG 301
Query: 65 --RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITE+ L+ +F KI +++ + +TG +GY + F ++ AL
Sbjct: 302 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKAL 361
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 362 EQLNGFELAGRPMKV 376
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ LS I DL++ FS K+ +R T +T F+G A+++F D S+++AL L
Sbjct: 207 VFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALGLS 266
Query: 125 QEVVRGRPVKIS 136
+ + G P+ +
Sbjct: 267 GQRLLGIPISVQ 278
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F++E +V A+ L G ++ G+ + Q +A K ++ + P+ G
Sbjct: 217 SGRSKGVGYVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGNNH 274
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE DL+ +F L F ETG RGY V F D
Sbjct: 275 AAPFHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 332
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 333 REALEKMNGFDLAGRAIRV 351
>gi|449672308|ref|XP_002159289.2| PREDICTED: eukaryotic translation initiation factor 4B-like,
partial [Hydra magnipapillata]
Length = 546
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL +D+TE D+K LF K+ ++RF + G +G+ + +F+D L AL L E
Sbjct: 93 FLGNLPFDVTENDIKDLFRGLKVENIRFPL--DNGRMKGFGYAEFNDIDQLKQALALTNE 150
Query: 127 VVRGRPVKISCA 138
+R R ++I A
Sbjct: 151 KIRTRQIRIDIA 162
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F+ E V +AL +G EM+ F + R +D + + +++GNLS
Sbjct: 221 AYVVFKDEDGVTKALERNGMEMEKDF-------HIRVDRVTDSSSH--DHKRSVFVGNLS 271
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+DI E ++ F +C + ++R +K +G +G+ +V F + S+ +ALKLD + GR
Sbjct: 272 FDINELTFRRHFEECGTVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALKLDGSKLEGR 331
Query: 132 PVKISCAVPPKK 143
+++ ++ +K
Sbjct: 332 SIRVKRSLKKEK 343
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG ++ T E A K E+DG L + KA + P++ E
Sbjct: 979 ETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVN--KAAPRGSQPERPPRVFEPA 1036
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL WD+ L+++FS+ K+ R ++ETG RG+ V S L A+
Sbjct: 1037 FRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIA 1096
Query: 122 KLDQEVVRGRPVKISCA 138
D + + GR ++++ A
Sbjct: 1097 ATDGQTLDGRTIRVNVA 1113
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGS-EMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG + T +A+ L +++G L + KA + P+ +
Sbjct: 133 ETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN--KAAPRGSRPERAPRTFQPT 190
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GN+ WDI + L+++FS+ K+ S R ++E+G RG+ V S +S A+
Sbjct: 191 YRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIA 250
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR ++++ A
Sbjct: 251 NLDGQTLDGRTIRVNAA 267
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F+ EG V RAL +G E++ F + K + S K +++GNLS
Sbjct: 208 AYVVFKDEGGVTRALERNGLEIEKDFY----IRVDKVVKNSSHDHK-----RSVFVGNLS 258
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+DI E + F DC + ++R ++ +G +G+ ++ F + ++ +ALKLD ++GR
Sbjct: 259 FDINELAFRHHFEDCGSVEAVRLVRDQNSGLGKGFGYILFKSADAVQLALKLDGSKLQGR 318
Query: 132 PVKI 135
+++
Sbjct: 319 RIRV 322
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTG+ RG A + + + LDGSE G L++ K K P E
Sbjct: 147 DTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK-----LPLYPETE 201
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNLSW +T E L ++F + + R + ETG RGY V +S + AL+
Sbjct: 202 YKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261
Query: 123 -LDQEVVRGRPVKISCA 138
L+ + GR ++IS A
Sbjct: 262 SLNGVELEGRAIRISLA 278
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
TG+ RG A + T +R + LDG+ G +++ K K P E +
Sbjct: 170 TGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMADKPKPKE-----PLYPETEH 224
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
++++GNLSW +T E L F C + R + ETG RGY V +S + A++
Sbjct: 225 KLFVGNLSWTVTPEMLTDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIET 284
Query: 123 LDQEVVRGRPVKISCAV 139
L+ + GR ++++ A+
Sbjct: 285 LNGTEIEGREIRVNLAL 301
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-------AKRTSDFTPK 58
T + +GIA + F +V A+ L+G ++ G+ + +QP +A + A +S +
Sbjct: 234 TRRSKGIAYVEFLDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQR 293
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G R+Y+G+L ++ITE+ LK +F KI + + ET +GY + F DS
Sbjct: 294 GNVGPMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDA 353
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL +L+ + GRP+K+
Sbjct: 354 KKALEQLNGFELAGRPMKV 372
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K K + T V G
Sbjct: 243 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARN-TEGHVSGNQN 301
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE DL+ +F E G RGY V F D
Sbjct: 302 SIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPNQARE 361
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 362 ALEKMNGFDLAGRPIRV 378
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 17/120 (14%)
Query: 31 GSEMDGLFLKIQPY------------KATKAKRTSDFTPKIVEGYNR-IYIGNLSWDITE 77
G ++G +L+ +P K + R P VE + + +++GNL +D+ E
Sbjct: 222 GLSLNGHWLQTKPISTDTPTDYQSSGKHIRVDRALRHRP--VEQFKQSVFLGNLPFDVQE 279
Query: 78 EDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEV-VRGRPVKI 135
E+++ S I+++R +KETG +G+ V ++D ++S+A++ + V VRGRP++I
Sbjct: 280 EEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAAISLAIRSSESVSVRGRPIRI 339
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C ++ + T+K TG +G+A+++F+D ++ AL LD
Sbjct: 93 VYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALD 152
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV 162
+ + RGR +K+ + G+++ +R + R ++V
Sbjct: 153 ESLFRGRQIKVCAKRTNRPGVSTTNRPPRTRGRGGTRV 190
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 60 VEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
VE + + +++GNL +D+ EE+++ S I+++R +KETG +G+ V ++D ++
Sbjct: 62 VEQFKQSVFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAAI 121
Query: 118 SMALKLDQEV-VRGRPVKI 135
S+A++ + V VRGRP++I
Sbjct: 122 SLAIRSSESVSVRGRPIRI 140
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 172 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 231
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
+ + RGR +K+ + GI++ R P ++
Sbjct: 232 ESLFRGRQIKVIPKRTNRPGISTTDRGFPRSR 263
>gi|389630338|ref|XP_003712822.1| translation initiation factor 4B [Magnaporthe oryzae 70-15]
gi|351645154|gb|EHA53015.1| translation initiation factor 4B [Magnaporthe oryzae 70-15]
gi|440466082|gb|ELQ35368.1| translation initiation factor 4B [Magnaporthe oryzae Y34]
gi|440482698|gb|ELQ63165.1| translation initiation factor 4B [Magnaporthe oryzae P131]
Length = 563
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F+ C++ S+R ++E +G+ + +F+ + L AL D +
Sbjct: 85 HLGNLSYDATNETVTDFFAACEVVSVRIVEDREQQRPKGFGYAEFATAEGLQKALNFDGD 144
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS 151
+GR ++I A PPK NS+ RS
Sbjct: 145 SFQGRVIRIRIADPPK---NSEGRS 166
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS--------DFTPKIVE 61
+GIA I F +V A+ L G + G+ + +Q +A K + + + K +
Sbjct: 169 KGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMM 228
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G R+Y+G+L ++ITEE L+ +F +I +++ + +TG +GY + F+D+ A
Sbjct: 229 GPLRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKA 288
Query: 121 L-KLDQEVVRGRPVKI 135
L +L+ + GRP+K+
Sbjct: 289 LEQLNGFELAGRPMKV 304
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 15 INFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWD 74
+ F+T ++AL L+ ++ +G +++ S+ + +G I+IGNL +
Sbjct: 241 VRFKTIEEAQKALVLNATQFEGHTIRVD------MALNSNHKQNMKKG---IFIGNLPYS 291
Query: 75 ITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPV 133
I E+++ F DC IS++R + TG +G+ +VDF S+ +A+++ + V+ R +
Sbjct: 292 IQEDEIWDYFKDCGTISAVRIVRDNATGVSKGFGYVDFETKESVELAMQIKGKKVQNREI 351
Query: 134 KISCAVPPKKGINS--KSRSLP 153
++ + K IN RSLP
Sbjct: 352 RVK-RIENNKNINKVFNKRSLP 372
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP------KI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ P +I
Sbjct: 215 SGRSKGVGYVEFKNEESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQI 274
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE DL+ +F L F ++ G RGY V F D
Sbjct: 275 P--FHRLYVGNIHFSITEGDLQNVFE--PFGELEFVQLQKEDQGRSRGYGFVQFRDPHQA 330
Query: 118 SMAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 331 REALEKMNGFDLAGRPIRVGL 351
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K K + T V G
Sbjct: 241 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARN-TEGHVSGNQN 299
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITE DL+ +F E G RGY V F D
Sbjct: 300 SIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPNQARE 359
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 360 ALEKMNGFDLAGRPIRV 376
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 170 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 229
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
+ + RGR +K+ + GI++ R P ++
Sbjct: 230 ESLFRGRQIKVIPKRTNRPGISTTDRGFPRSR 261
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 6 TGKFRGIAIINFRTEGAVKRA-LALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI----- 59
TG+ RG + ++ AV+ A +G E+DG L++ A KR + F
Sbjct: 136 TGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPA-PPKRENSFGDNSSYQGG 194
Query: 60 -----VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
++ NR+Y+GNL+W + ++ L+ LFS+ K+ + ++++G RG+ V +S
Sbjct: 195 RGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSS 254
Query: 114 SLSLSMALK-LDQEVVRGRPVKISCAV--PPKK 143
+ ++ A++ LD + GR +++S A PP++
Sbjct: 255 AKEVNDAIESLDGVDLGGRAIRVSPAEARPPRR 287
>gi|428171834|gb|EKX40748.1| hypothetical protein GUITHDRAFT_75377 [Guillardia theta CCMP2712]
Length = 96
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G ++ GNL++DI E+ L+++ C ++ ++R T++ETG F+G+ HV+F D+ S A
Sbjct: 7 GCTTVFCGNLAFDIDEQALREVMEPCGEVKNIRLATDRETGRFKGFGHVEFFDTESTEKA 66
Query: 121 LKLDQEVVRGRPVKISCAV 139
+ L V GR +++ A+
Sbjct: 67 VALGGTKVMGRILRVDYAM 85
>gi|258566776|ref|XP_002584132.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905578|gb|EEP79979.1| predicted protein [Uncinocarpus reesii 1704]
Length = 547
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+IGN+S+D T+ D+ +LF+ C+++++R +K T +G+ +V+F+ L AL
Sbjct: 84 HIGNMSFDATQADIAELFASCEVTNVRIVEDKLTRAPKGFGYVEFATLDGLKKALTFQGT 143
Query: 127 VVRGRPVKISCAVPPK 142
++GR +++S A PPK
Sbjct: 144 SLQGRNIRVSVAEPPK 159
>gi|303282331|ref|XP_003060457.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457928|gb|EEH55226.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 287
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSD---CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++GNL++ I ++ + K F + +I++LR+ TNKETGEFRG DF+ + A K
Sbjct: 206 LFMGNLNFAIDDDAMFKFFKEGAGVEIAALRWLTNKETGEFRGVGFADFNSDEDIDKAAK 265
Query: 123 LDQEVVRGRPVKISCAVP 140
L GRP+++ P
Sbjct: 266 LHGTPCMGRPIRMDWQAP 283
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
++Y+GNL+W I E+ LK+ F DC + S+ + KET +F G V+F + + A+
Sbjct: 98 KVYMGNLAWTIDEDALKEAFKDCGDVLSVNWFEEKETKKFLGAGVVEFDSADAAKRAVAA 157
Query: 124 DQEVVRGRPVKI 135
+V R KI
Sbjct: 158 AGRLVHDRETKI 169
>gi|150866559|ref|XP_001386201.2| hypothetical protein PICST_33568 [Scheffersomyces stipitis CBS
6054]
gi|149387815|gb|ABN68172.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 387
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
K +G A I+ + V +AL S ++G L I+ + + + + P +RI
Sbjct: 169 NKIKGFAYIDLPSAVHVTSVVALSESPLNGRKLLIKNANSFEGRPAAAVAPLSKNPPSRI 228
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL--K 122
++GNLS+D +E++L++ F C +I +R T ++TG+ +G+A +DF D + AL K
Sbjct: 229 LFVGNLSFDTSEDNLEEHFRHCGEIVRIRMATFEDTGKCKGFAFIDFKDETGPTAALKSK 288
Query: 123 LDQEVVRGRPVKI 135
L ++++ RP+++
Sbjct: 289 LAKKLI-NRPLRL 300
>gi|119482153|ref|XP_001261105.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
gi|119409259|gb|EAW19208.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
Length = 512
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T D+ LF+ C ++++R +K T +G+ +V+F L AL L
Sbjct: 89 HVGNLSFEATSADINDLFAGCGVTNVRIVEDKLTRTPKGFGYVEFETVDGLKKALDLSGT 148
Query: 127 VVRGRPVKISCAVPPK----KGIN-SKSRSLPSNKRATSKVTDSAGLGTSND 173
++GR +++S A PPK K ++ ++ LP+ ++ + +V D + G + D
Sbjct: 149 TLQGRAIRVSIAEPPKERDVKELDWTRKGPLPAPEQPSRRVPDRSTFGRNLD 200
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C ++ + T+K TG +G+A+++F+D ++ AL LD
Sbjct: 93 VYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALD 152
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV 162
+ + RGR +K+ + G+++ +R + R ++V
Sbjct: 153 ESLFRGRQIKVCAKRTNRPGVSTTNRPPRARGRGGARV 190
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T D+ LF+ C ++++R +K T +G+ +V+F L AL L
Sbjct: 74 HVGNLSFEATSADINDLFAGCGVTNVRIVEDKLTRSPKGFGYVEFETVDGLRRALDLSGT 133
Query: 127 VVRGRPVKISCAVPPK----KGIN-SKSRSLPSNKRATSKVTDSAGLGTSND 173
++GR +++S A PPK K ++ ++ LP+ ++ +V D + G + D
Sbjct: 134 TLQGRAIRVSIAEPPKERDVKELDWTRKGPLPAPEQPPRRVPDRSTFGRNLD 185
>gi|300176323|emb|CBK23634.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----------------QPYKAT 47
++G+ RG ++FR+E +K+AL ++G+ M+G L++ + +K
Sbjct: 42 ESGRSRGFGFVSFRSEEGLKKALDMNGTNMNGRVLRVIKKEDREDRDERRVRDRRTHKDV 101
Query: 48 KAKRTSDFTP-----KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETG 101
K +R+ D P + + N++ + L W T+ DL KLF KI N+ETG
Sbjct: 102 KRERSRDRAPAPAPARSYDNTNKLIVLQLPWKCTKADLTKLFDKFGKIVYCNIVVNRETG 161
Query: 102 EFRGYAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
RG V + + S ALK +D GR + + P
Sbjct: 162 LSRGMGIVKYEEEESYQKALKEMDCFEYEGRKLYVRPYQP 201
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 46 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 105
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 106 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 134
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 234 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI-----QPYKATKAK--RTSDFTP 57
TGK RG ++F ++ A ++AL G E+DG + + +P+ + R S F
Sbjct: 272 TGKSRGYGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGD 331
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+ +++GNLS++ ++L ++FS+ I S+R T+ +T + +G+ +V +
Sbjct: 332 TPSAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDE 391
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
AL+ L+ E + GRPV++ + P
Sbjct: 392 AKAALEALNGEYIEGRPVRLDFSAP 416
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
K+ E +++G LSW I +E LK+ F + S R + TG+ RGY +VDF +
Sbjct: 229 KVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSA 288
Query: 117 LSMALKLDQ-EVVRGRPVKISCAVPPKKGINSKS 149
ALK Q + GRP+ + + N++S
Sbjct: 289 AEKALKEYQGREIDGRPINLDMSTGKPHASNNRS 322
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-SDFTPKIVEG 62
P+ K RG A I+F + + A+ALDG+E G +++ + + + T +++ PK
Sbjct: 116 PNGVKSRGFAHIDFTSAEGKQAAMALDGTEFMGRTIRVDDAQPAQGRSTDTNYGPKT--- 172
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDCK--ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++++ NLS+D E+ LK+ F + + +++TG RG A++ F A
Sbjct: 173 -DKVFVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAEAA 231
Query: 121 LK-LDQEVVRGRPVKISCAVPPKKGINSKSR--SLPSNKR 157
+K ++ + GRP++ + G N ++R P+ +R
Sbjct: 232 VKGMNGVYLDGRPIRTDFS-----GDNDRNRLGERPARQR 266
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G L++D T E+++ F C +S +R + + RG+AH+DF+ + A+ LD
Sbjct: 83 VFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMALD 142
Query: 125 QEVVRGRPVKISCAVP 140
GR +++ A P
Sbjct: 143 GTEFMGRTIRVDDAQP 158
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C I+ + NK G +G+A+++F+D S++ A+ +D
Sbjct: 197 VYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMD 256
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
+ RGR +K++ K GI++ +R + S RA
Sbjct: 257 DSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRA 290
>gi|47226485|emb|CAG08501.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
F G F+G I F + +V AL LD EM+ + + P + DF V
Sbjct: 683 VFSTKGTFKGYCYIQFESVASVAEALKLDRQEMENRPVFVSP--CVDKNKNPDFK---VF 737
Query: 62 GYN------RIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF 111
YN +I+I L + T+E LK++ CK I +R T + +G+ +G A+V+F
Sbjct: 738 KYNTSMEKQKIFISGLPFSCTKEQLKEV---CKSYGTIKDVRLVTYR-SGKPKGLAYVEF 793
Query: 112 SDSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSK 148
++ S A LK+D V+ G + ++ + PP++ + K
Sbjct: 794 TEETHASQAVLKMDGMVIDGNTISVAISNPPRRNVMDK 831
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 38 FLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
F K Q A ++ D P++ N ++I NL++ + E + L+ +F C I +R
Sbjct: 623 FKKPQQAVAAAPQKQKDDKPELRNDNNSVFISNLAYTLEEPEAKLRTMFEPCGPIKQIRP 682
Query: 94 -FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAV 139
F T G F+GY ++ F S++ ALKLD++ + RPV +S V
Sbjct: 683 VFSTK---GTFKGYCYIQFESVASVAEALKLDRQEMENRPVFVSPCV 726
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 156 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 215
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 216 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 244
>gi|240275573|gb|EER39087.1| nucleic acid-binding protein [Ajellomyces capsulatus H143]
Length = 332
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGNLS+++T+ +L LF D + +R +K TG RG+AH DF D S A++ L
Sbjct: 217 LFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLDVESAKAAMEIL 276
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSR 150
++ GRP+++ ++ K + S++R
Sbjct: 277 KEKAPYGRPLRLDYSLNTKDMLASQNR 303
>gi|451851719|gb|EMD65017.1| hypothetical protein COCSADRAFT_88594 [Cochliobolus sativus ND90Pr]
Length = 523
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D+ F+DC+++++R +K + +G+ +V+F L AL L
Sbjct: 76 HLGNLSFDATEGDVTDFFADCEVTNVRIVEDKLDRKPKGFGYVEFGSVDGLKKALDLSGT 135
Query: 127 VVRGRPVKISCAVPPK 142
+GR +++S A PPK
Sbjct: 136 SFQGRNIRVSVAEPPK 151
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + P+ G
Sbjct: 215 SGRSKGVGYVEFKNEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGSNH 272
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE DL+ +F L F ETG RGY V F D
Sbjct: 273 AAPFHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 330
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 331 REALEKMNGFDLAGRAIRV 349
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 170 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 229
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
+ + RGR +K+ + GI++ R P ++
Sbjct: 230 ESLFRGRQIKVIPKRTNRPGISTTDRGFPRSR 261
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 5 DTGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E AV++ + +++G L + KA + P++
Sbjct: 163 ETDQSRGFGFVTMSTVEEAETAVEK---FNRYDLNGRLLTVN--KAAPRGSRPERAPRVY 217
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E R+Y+GNL WD+ L+++FS+ K+ R ++ETG RG+ V S+ L+
Sbjct: 218 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELND 277
Query: 120 AL-KLDQEVVRGRPVKISCAVP-PKKGI 145
A+ LD + + GR ++++ A P++G
Sbjct: 278 AIAALDGQNMEGRAIRVNVAEERPRRGF 305
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 60 VEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+E NR +Y+GN+ + T E+L++ F C I+ + NK G +G+A+++F D S+
Sbjct: 92 IEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSV 151
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSR 150
A+ +D+ + RGR +K+ K G++S +R
Sbjct: 152 QTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNR 184
>gi|194740804|ref|XP_001952880.1| GF17498 [Drosophila ananassae]
gi|190625939|gb|EDV41463.1| GF17498 [Drosophila ananassae]
Length = 325
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--YNRIYIGN 70
A + +T + ALAL+G E L++ P A K KR D + ++ EG N +++GN
Sbjct: 110 AYVVLQTPQIAESALALNGFEFKDNHLRVTP--AKKVKR--DGSEEVNEGDSKNTVFVGN 165
Query: 71 LSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVR 129
L + E+ L +FS C I +R + E G +G A+V F +S S+ +AL+L+Q ++
Sbjct: 166 LKYSTNEKMLHDIFSSCGVIDYIRCLRDGEKG-CKGVAYVCFKNSDSVGLALELNQTLLD 224
Query: 130 GRPVKISCAVPPKKGINSK 148
RP+ + + K G K
Sbjct: 225 DRPINVERYLNKKLGAKQK 243
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 15 INFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RIYIGNL 71
+ F+ + + ALAL+G + DG L++ + AKR YN +++GNL
Sbjct: 191 VKFKNAKSKEAALALNGEKYDGNLLRVD---SCCAKRK----------YNCRTTVFVGNL 237
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+D++E +L F +S +R + TG +G+A V F DS ++ +AL+LD + +
Sbjct: 238 PYDVSENELIAHFEMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSAAVPLALQLDGSIFKR 297
Query: 131 RPVK 134
RP++
Sbjct: 298 RPLR 301
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
TG+ RG A + T +R + LDG+ G +++ A R P E +
Sbjct: 287 TGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVN-----MADRPKPKAPLYPETEH 341
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
++++GNLSW +T E L F C + R + ETG RGY V +S + A++
Sbjct: 342 KLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIET 401
Query: 123 LDQEVVRGRPVKISCAV 139
L+ + GR ++++ A+
Sbjct: 402 LNGTEIEGREIRVNLAL 418
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 176 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 235
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 236 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 264
>gi|258566441|ref|XP_002583965.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907666|gb|EEP82067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 372
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------PYKATKAKRTSDFTPKIVE 61
+G A + F T AV+RA+AL + G + I+ P K+ ++ S+ TP
Sbjct: 125 KGFAYVGFSTSEAVQRAVALSEKLLSGRAVLIKDANDYSGRPEKSDAVEKPSNKTPS--- 181
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+I++GNL++DIT+E L++ + C IS + T +++G+ +GY V+F + S A
Sbjct: 182 --RKIFVGNLAFDITKEMLEEHYQPCGSISHVHIATFQDSGKCKGYGWVEFEELDSAVAA 239
Query: 121 LK 122
++
Sbjct: 240 IR 241
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 14/110 (12%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC------KISSLRFGTNKETGEFR-----GYAHVDFSDS 114
I+IGNL + T++DL+K F+ +I+ L ++ E R G+A+V FS S
Sbjct: 76 IWIGNLPFTATQDDLRKFFTTQGTFTPDEITRLHLPSSGEKNNGRQVLNKGFAYVGFSTS 135
Query: 115 LSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSL--PSNKRATSKV 162
++ A+ L ++++ GR V I A G KS ++ PSNK + K+
Sbjct: 136 EAVQRAVALSEKLLSGRAVLIKDAN-DYSGRPEKSDAVEKPSNKTPSRKI 184
>gi|225679309|gb|EEH17593.1| nucleic acid-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 960
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTP-K 58
+ + G RG A + F + A + A+ +EM+ + + + R +++ TP +
Sbjct: 801 IVYDSRGMSRGFAYVQFDSIDAAEAAI----NEMNMTIYEGRRVVVNYSSRGSANPTPTR 856
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
E ++IGNLS+++++ +L +LF D K ++ +R ++ TG+ RG+AH DF D S
Sbjct: 857 SNEPTRTLFIGNLSFEMSDRELNELFKDIKNVTDVRVSVDRRTGQPRGFAHADFLDVESA 916
Query: 118 SMALK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRAT 159
A + L + GRP+++ + + + R + S T
Sbjct: 917 QAAFEILKDKAPYGRPLRLDYSFSSRDNTVDRLRDVGSGSNET 959
>gi|323451946|gb|EGB07821.1| hypothetical protein AURANDRAFT_64341 [Aureococcus anophagefferens]
Length = 293
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 46 ATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCK---ISSLRFGTNKETGE 102
A K + TP+ G ++++IGN++++ T++D+ +F D +S++R+ T+K+TG+
Sbjct: 197 ARKGTTPRERTPRPEGGSHKLFIGNIAYEATDDDVAAVFKDVAPEGLSAVRWVTHKDTGD 256
Query: 103 FRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
F+G ++ F A++L+ + GRP+++ A
Sbjct: 257 FKGCGYLQFHTVEQADAAVELNGAKLHGRPIRLDYA 292
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+++GNL W IT+++L + + +++ T+KE+G+F G A VD + + A
Sbjct: 103 GVTRLFVGNLPWSITDDELARALGRESLPVIKYITDKESGKFYGSAFVDVGGDAAAAAAA 162
Query: 122 KL-DQEVVRGRPVKISCAVPPKKG 144
+ + V GRP+K++ A PP+ G
Sbjct: 163 VARNGDSVGGRPMKVAYA-PPRPG 185
>gi|302306417|ref|NP_982813.2| ABL134Cp [Ashbya gossypii ATCC 10895]
gi|299788506|gb|AAS50637.2| ABL134Cp [Ashbya gossypii ATCC 10895]
gi|374106015|gb|AEY94925.1| FABL134Cp [Ashbya gossypii FDAG1]
Length = 375
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT-SDFTPKIVEGYNRI 66
K +G A ++F T + + L ++++G L I+ K+ + +D +RI
Sbjct: 158 KNKGFAYVDFATSAQMDAVIGLSEAQLNGRNLLIKNAKSYDGRPAKNDLISMSKNPPSRI 217
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T+E LKK F C +I +R T +++G+ +G+A VDF D + AL D
Sbjct: 218 LFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFRDEAGATAAL-TD 276
Query: 125 Q--EVVRGRPVKI 135
+ + GRP+++
Sbjct: 277 RSCRAIAGRPLRM 289
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 66 IYIGNLSWDITEEDLKKL------------FSDCKISSLRFGTNKETGEF---RGYAHVD 110
++IGN+++D T+E+L++ +D I + K G+ +G+A+VD
Sbjct: 107 VWIGNMAFDTTQEELRRFVVSKTAGMEAGEVTDADIVRVNMPLAKNDGKQIKNKGFAYVD 166
Query: 111 FSDSLSLSMALKLDQEVVRGRPVKISCAV-----PPKKGINSKSRSLPS 154
F+ S + + L + + GR + I A P K + S S++ PS
Sbjct: 167 FATSAQMDAVIGLSEAQLNGRNLLIKNAKSYDGRPAKNDLISMSKNPPS 215
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 19/142 (13%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR---------TSDFT 56
+G+ +G+ + F+ E +V +A+ L G ++ G+ + Q +A K ++ T++
Sbjct: 175 SGRSKGVGYVEFKDEASVPKAIQLTGQKLLGIPIIAQLTEAEKNRQARVSAAEATTTNQI 234
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDS 114
P ++R+Y+GN+ + ITE DL+ +F L F +E G RGY V + D
Sbjct: 235 P-----FHRLYVGNIHFSITESDLQNVFE--PFGELEFVQLQKEEGGRSRGYGFVQYRDP 287
Query: 115 LSLSMAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 288 NQAREALEKMNGFDLAGRPIRV 309
>gi|339245511|ref|XP_003378681.1| eukaryotic translation initiation factor 4H [Trichinella spiralis]
gi|316972396|gb|EFV56074.1| eukaryotic translation initiation factor 4H [Trichinella spiralis]
Length = 204
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 48/72 (66%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL + DL+++F + +++S R +++T +F+G+A+V+F ++ SL MALKLD
Sbjct: 22 FVGNLPDSTLQSDLEEIFRNLQVTSSRLVYDRDTDQFKGFAYVEFGNAESLEMALKLDGG 81
Query: 127 VVRGRPVKISCA 138
+ R ++I A
Sbjct: 82 MFMQRRLRIDIA 93
>gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster]
Length = 435
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 24 KRALALDGSEMDGLFLKIQPYK-ATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKK 82
++ALAL+GSE L++ P A K + D P + I++G+L + TEE L++
Sbjct: 219 QQALALNGSEFKENHLRVTPASMAEKFGQAKDQQPSDKDAKRTIFVGSLKYSATEEQLRE 278
Query: 83 LFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKIS 136
+FS C +I +R + + G +G A+V F ++ +AL+L+Q ++ RP+ +
Sbjct: 279 IFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLLDDRPINVE 332
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + P G
Sbjct: 215 SGRSKGVGYVEFKNEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PDASSGNNH 272
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE DL+ +F L F ETG RGY V F D
Sbjct: 273 AAPFHRLYVGNIHFSITENDLQNVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQA 330
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 331 REALEKMNGFDLAGRAIRV 349
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 234 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|325091401|gb|EGC44711.1| nucleic acid-binding protein [Ajellomyces capsulatus H88]
Length = 359
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGNLS+++T+ +L LF D + +R +K TG RG+AH DF D S A++ L
Sbjct: 244 LFIGNLSFEMTDRELNDLFRDIPNVDDVRVSVDKRTGRPRGFAHADFLDVESAKAAMEIL 303
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSR 150
++ GRP+++ ++ K + S++R
Sbjct: 304 KEKAPYGRPLRLDYSLNTKDMLASQNR 330
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 240 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 299
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 300 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 328
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 62 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 121
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 122 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 150
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 143 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 202
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 203 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 231
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+ +TEEDLK FS+ K+S ++ T++ETG RG+A V+ + A++ L
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT------SDFTPKI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ S+ +
Sbjct: 236 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQS 295
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++R+Y+GN+ + ITE DL+ +F +ETG +GY V F D
Sbjct: 296 IP-FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREETGRSKGYGFVQFRDPNQARE 354
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 355 ALEKMNGFDLAGRPIRV 371
>gi|340373419|ref|XP_003385239.1| PREDICTED: eukaryotic translation initiation factor 4H-like
[Amphimedon queenslandica]
Length = 267
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL + + DL +F K+ ++R +KE+ F+G+ +V+F D SL AL+ D
Sbjct: 42 FVGNLPLNTVQGDLDAIFQKLKVKAVRLVRDKESDRFKGFCYVEFEDVESLKEALEYDGA 101
Query: 127 VVRGRPVKISCA 138
GRP+K++ A
Sbjct: 102 EYDGRPLKVNVA 113
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ + P+
Sbjct: 225 SGRSKGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEANASGNQ 282
Query: 63 ----YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
++R+Y+GN+ + ITE DL+K+F +E G RGY V F D
Sbjct: 283 NSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPNQAR 342
Query: 119 MAL-KLDQEVVRGRPVKISC 137
AL K++ + GRP+++
Sbjct: 343 EALEKMNGFDLAGRPIRVGL 362
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 141 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 200
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 201 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 229
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 60 VEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+E NR +Y+GN+ + T E+L++ F C I+ + NK G +G+A+++F D S+
Sbjct: 92 IEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSV 151
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSR 150
A+ +D+ + RGR +K+ K G++S +R
Sbjct: 152 QTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNR 184
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 234 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|322778896|gb|EFZ09312.1| hypothetical protein SINV_14530 [Solenopsis invicta]
Length = 565
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
YI NL +D+ E DL F+D KISS+R K+ + +GY +V+F D SL AL +
Sbjct: 108 YISNLPYDVDETDLADFFADMKISSMRLP--KDANKIKGYGYVEFEDRQSLIDALSMTNT 165
Query: 127 VVRGRPVKISCA 138
++ R V+I +
Sbjct: 166 TIKTRRVRIEVS 177
>gi|395833841|ref|XP_003789927.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Otolemur garnettii]
Length = 964
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 741 FSNRGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 800
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 801 EKHKLFISGLPFSCTKEELEEI---CKTHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 856
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A LK+D ++ +K++ + PP++ + K SR P ++ + G G +
Sbjct: 857 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEKPESRKAPGGSMVPRQLYGARGKGRT 913
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + + E D LK LF C ++ +R
Sbjct: 683 QKDKAAALKRD---MPKVPHDSSKDSITVFVSNLPYSMGEPDVKLKPLFEACGEVVEIRP 739
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+N+ G+FRGY +V+F + S AL+LD++ V GRP+ +S V K + K
Sbjct: 740 IFSNR--GDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVSPCVDKSKNPDFK 792
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + T+ K G R+Y
Sbjct: 222 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQKGSGGPVRLY 281
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + ETG +GY + FSDS AL +L+
Sbjct: 282 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG 341
Query: 126 EVVRGRPVKI 135
+ GRP++I
Sbjct: 342 FELAGRPMRI 351
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 234 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
NRIY+G++ WD+T +D+K +F + S N ETG+ +GY V++ +S S A+
Sbjct: 411 NRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQ 470
Query: 122 KLDQEVVRGRPVKISCAV 139
+++ + GRP+K+ A+
Sbjct: 471 QMNGWDLGGRPIKVGRAI 488
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
RIY+G+L+++++EED+K FS + S+ + T +G+A V+++ + + ALK
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 123 LDQEVVRGRPVKISCAVPPKKGI 145
++ ++ GR +K+ P G+
Sbjct: 312 MNGFMLAGRQLKVGRPHTPGAGL 334
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 60 VEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+E NR +Y+GN+ + T E+L++ F C I+ + NK G +G+A+++F D S+
Sbjct: 92 IEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSV 151
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSR 150
A+ +D+ + RGR +K+ K G++S +R
Sbjct: 152 QTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNR 184
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKA-------KRTSDFTP 57
TG+ RG ++F + + ++AL + G E+DG + + + A R S +
Sbjct: 163 TGRSRGYGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGD 222
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
K + +++GNLS+ + L +LFS ++S+R T+ ET + +G+ +V FS
Sbjct: 223 KRSPPSDTLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDE 282
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
+ AL+ L+ E V RP+++ + P
Sbjct: 283 ATGALEALNGEYVDNRPIRLDYSTP 307
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+++G LSW I +E LKK F + R + TG RGY +VDF + S AL ++
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 124 DQEVVRGRPVKISCA 138
+ + GRP+ + +
Sbjct: 188 QGKEIDGRPINVDMS 202
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 170 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 229
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 230 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 258
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 234 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 72/131 (54%), Gaps = 16/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RIYIG 69
A I F +E + K+AL+++G + +G ++++ D + K + Y ++IG
Sbjct: 403 AYIRFESEESTKKALSVNGRKFEGNYIRV------------DMSMKSNDRYETKKSVFIG 450
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL +++ ++ ++ F C +I S+R + +TG +G+ +V+F ++++AL+LD +
Sbjct: 451 NLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDGTTI 510
Query: 129 RGRPVKISCAV 139
R +++ +
Sbjct: 511 LNREIRVKPNI 521
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 260
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 261 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 289
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 46 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 105
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 106 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 134
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 10 RGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
RG ++ T E A K ++DG L + KA + P++ E RIY+
Sbjct: 182 RGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVN--KAAPRGSRPERPPRVFEPGYRIYV 239
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQE 126
GNL WD+ L+++FS+ K+ R +++TG RG+ V S L+ A+ LD
Sbjct: 240 GNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGR 299
Query: 127 VVRGRPVKISCA 138
+ GR ++++ A
Sbjct: 300 SLDGRAIRVNVA 311
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 57 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 116
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 117 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 145
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 233 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 292
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 293 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 321
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IYIGNLS+ +TEEDLK F++ K+S ++ T++ETG RG+A V+ + A++ L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 66 IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IYIGNL++ TE+DL+K F S +++S+R T+K +G+ RG A V+ ++ + A+ L
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRS 151
+ +RGR +K++ A+ PKK KSRS
Sbjct: 63 NGTQIRGREIKVNEAL-PKKPFPEKSRS 89
>gi|24584762|ref|NP_609822.1| CG12288 [Drosophila melanogaster]
gi|7298360|gb|AAF53587.1| CG12288 [Drosophila melanogaster]
Length = 435
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 24 KRALALDGSEMDGLFLKIQPYK-ATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKK 82
++ALAL+GSE L++ P A K + D P + I++G+L + TEE L++
Sbjct: 219 QQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLRE 278
Query: 83 LFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKIS 136
+FS C +I +R + + G +G A+V F ++ +AL+L+Q ++ RP+ +
Sbjct: 279 IFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLLDDRPINVE 332
>gi|410075471|ref|XP_003955318.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
gi|372461900|emb|CCF56183.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
Length = 381
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNRI 66
K +G I+F TE +K L L+ ++++G L I+ K + + +D +RI
Sbjct: 165 KNKGFCYIDFSTEQKMKAVLELNENQLNGRNLLIKNSKNFEGRPDKNDLVSMSKNPPSRI 224
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T+E LKK F C +I +R T +++G+ +G+A VDF + ALK D
Sbjct: 225 LFVGNLSFDTTDEVLKKHFQHCGEIIKIRMATFQDSGKCKGFAFVDFKSEEGATNALK-D 283
Query: 125 QEVVR--GRPVKIS 136
+ R RP+++
Sbjct: 284 KTCRRIASRPIRME 297
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK-RTSDFTPKIVEGYNRIYI 68
+GIA + FR +V +AL L+G++++G+ + IQ ++ K K K +G R+YI
Sbjct: 37 KGIAYVEFRLVDSVDKALKLNGTKVEGIPIMIQRTQSEKNKIAALQAQQKAQQGPTRLYI 96
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQE 126
G+L ++I E+ L+ +F + ++ + +T +GY + + + S AL +L+
Sbjct: 97 GSLHYNINEDMLRAIFEPFGLVENVNIIRDSDTNVSKGYGFIQYKEPDSARRALEQLNGL 156
Query: 127 VVRGRPVKI 135
V GRP+K+
Sbjct: 157 EVAGRPIKV 165
>gi|345566791|gb|EGX49733.1| hypothetical protein AOL_s00078g222 [Arthrobotrys oligospora ATCC
24927]
Length = 303
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
++IGNLS+DIT++DL +LF+ + + +R ++ TG+ RG+AH DF D S A +L
Sbjct: 207 LFIGNLSFDITDKDLNELFAGVRNCTDVRVAIDRRTGQPRGFAHADFVDIASAEAAKGQL 266
Query: 124 DQEVVRGRPVKI 135
+ + + GR ++I
Sbjct: 267 ETKSIYGRQIRI 278
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
DF + RIY+GN+S+ I EDL++ F + K+ S + + G +G+ +V++
Sbjct: 102 DFQGNPLPPTKRIYVGNISYGIRGEDLEREFGEFGKVVSAKVVYDPR-GLSKGFGYVEYE 160
Query: 113 DSLSLSMAL-KLDQEVVRGRPVKISCAV-PPKKGI-----NSKSRSLPSNKRA---TSKV 162
+ + + A+ K+ +V GR + + + P ++G N+ SR+L + T K
Sbjct: 161 EQDAATAAVQKMHGLIVDGRRINVQYVLRPDREGPTNGESNAPSRTLFIGNLSFDITDKD 220
Query: 163 TDSAGLGTSNDADNSGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHL 222
+ G N D A+ G +D + A G++ ++ Y G
Sbjct: 221 LNELFAGVRNCTDVRVAIDRRTGQPRGFAHADFVDIASAEAAKGQLETKSIY-----GRQ 275
Query: 223 SSACLKKTADQTMVTG 238
KT+ Q M G
Sbjct: 276 IRIDFTKTSPQRMPLG 291
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKA-----KRTSDFTPKIVEG 62
K +G + F+T +A+A+ G E+DG ++ + A K +R F +
Sbjct: 251 KSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCD-FAAEKTDNPVERRAQKFNDQRSAP 309
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+Y+G LS+D+ E+ + + F D I + T++ETG +G+ +V+F+D + AL
Sbjct: 310 AATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAAL 369
Query: 122 K-LDQEVVRGRPVKISCAVP 140
+ ++ + + GR +++ + P
Sbjct: 370 EAMNGKELSGRRIRVDYSGP 389
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L+ F C ++ + T+K TG +G+A+++F+D ++ AL LD
Sbjct: 93 VYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTALALD 152
Query: 125 QEVVRGRPVKIS-CAVPPKK----GINSKSRSLPSNKRATSKV 162
+ + RGR +K S C+V K+ G+++ +R + R ++V
Sbjct: 153 ESLFRGRQIKASFCSVCAKRTNRPGVSTTNRPPRARGRGGARV 195
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 57 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 116
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 117 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 145
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 26 ALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIYIGNLSWDITEEDLKKL 83
L +D S+M + PY + +A+ D T +I IY+GN+ + T ++L+
Sbjct: 27 VLEMDESDMQYEVERQFPY-SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMY 85
Query: 84 FSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPK 142
F+ C ++ + N+ TG +G+A+++FSD S+ A+ LD+ + RGR +K+S PK
Sbjct: 86 FNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVS----PK 141
Query: 143 K 143
+
Sbjct: 142 R 142
>gi|407923317|gb|EKG16390.1| hypothetical protein MPH_06359 [Macrophomina phaseolina MS6]
Length = 509
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D++ F +C+++++R +K + +G+ +V+F L AL L
Sbjct: 84 HLGNLSFDATEGDIQDFFMECEVTNVRIVEDKLDHKPKGFGYVEFGSVDGLKKALALSGT 143
Query: 127 VVRGRPVKISCAVPPKKGINSK 148
+GR +++S A PPK+ +++
Sbjct: 144 QFQGRNIRVSVAEPPKERADTR 165
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 260
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 261 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 289
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 260
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 261 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 289
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 6 TGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
+G+ RG + F + E AVK G E+DG +++ P KR F + +
Sbjct: 242 SGRSRGFGYVEFESHELAVKAMDQFAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSD 301
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
N ++IGNLS++ E+ + + F + + S+R T++ETG +G+ +V F+D + A
Sbjct: 302 PSNTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAA 361
Query: 121 L------KLDQEVVR 129
+ +LD V+R
Sbjct: 362 IDGAAGSELDGRVIR 376
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
+I++G LSW+I ++ LK F + + R ++++G RG+ +V+F S +A+K
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFE---SHELAVKA 262
Query: 123 LDQ---EVVRGRPVKISCAVP----PKKGINS--KSRSLPSN 155
+DQ + + GRPV++ +VP P+K S RS PSN
Sbjct: 263 MDQFAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSDPSN 304
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG--LFLKIQPYKATKAKRTSDFTPKIVEG 62
TGK RG ++F T+ A ++AL + G E+DG + L + K ++ T+D + +
Sbjct: 233 TGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAKQYGDS 292
Query: 63 Y----NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+ +++GNLS++ ++L +F + + S R T+ +T + +G+ +V FS
Sbjct: 293 QSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEA 352
Query: 118 SMALK-LDQEVVRGRPVKISCAVP 140
AL+ L+ E + GRP ++ + P
Sbjct: 353 KAALEALNGEYIEGRPCRLDFSTP 376
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW+I + LK+ F + S R + TG+ RGY +VDF + AL+
Sbjct: 198 LFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKALEEM 257
Query: 125 Q-EVVRGRPVKI 135
Q + + GRP+ +
Sbjct: 258 QGKEIDGRPINL 269
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 32 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 91
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 92 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 120
>gi|426232776|ref|XP_004010396.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Ovis aries]
Length = 447
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + T+ K G R+Y
Sbjct: 206 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAATASNLQKGSGGPVRLY 265
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + ETG +GY + FSDS AL +L+
Sbjct: 266 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG 325
Query: 126 EVVRGRPVKI 135
+ GRP++I
Sbjct: 326 FELAGRPMRI 335
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
TG+ RG A + T +R + LDG+ G +++ A R P E +
Sbjct: 171 TGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVN-----MADRPKPKAPLYPETEH 225
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
++++GNLSW +T E L F C + R + ETG RGY V +S + A++
Sbjct: 226 KLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIET 285
Query: 123 LDQEVVRGRPVKISCAV 139
L+ + GR ++++ A+
Sbjct: 286 LNGTEIEGREIRVNLAL 302
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPK 58
D G+ RG ++F T E A K A+ G E+DG L + +P ++ R +D K
Sbjct: 296 DGGRSRGFGYVDFETPEAATKAYEAMQGFELDGRPLNLDYANTRPAESNPRDRATDRAKK 355
Query: 59 ----IVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDF 111
+ ++IGNL +D +E +++ F++ +++S+R T+ ++G +G+ +V F
Sbjct: 356 HGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSF 413
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 45 KATKAKRTSDFTPKIV--EGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETG 101
K KA D TPK EG ++ GNLSW+I + L + F + + + R T+++ G
Sbjct: 239 KKRKADEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGG 298
Query: 102 EFRGYAHVDFSDSLSLSMALKLDQEV-VRGRPVKISCA 138
RG+ +VDF + + A + Q + GRP+ + A
Sbjct: 299 RSRGFGYVDFETPEAATKAYEAMQGFELDGRPLNLDYA 336
>gi|115396600|ref|XP_001213939.1| predicted protein [Aspergillus terreus NIH2624]
gi|114193508|gb|EAU35208.1| predicted protein [Aspergillus terreus NIH2624]
Length = 282
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI 59
+TF + G RG + F T + KRA+ A+ +G + +Q + A + S +
Sbjct: 130 ITFDNRGISRGFGYVQFDTIESAKRAISAMHMRVFEGRRVVVQYAQNNVAPQRS-----M 184
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+YIGNLS++ T+ DL +LF D + +R ++ TG FRG+AH +F + S
Sbjct: 185 RPATRTLYIGNLSFETTDRDLNELFRDVVNVIDVRVSVDRRTGLFRGFAHAEFINVESAR 244
Query: 119 MALK-LDQEVVRGRPVKI 135
+ + L ++ GR ++I
Sbjct: 245 IGYEILSRKTPYGRKLRI 262
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-LD 124
+Y+GNL +D+T EDL+K + F T G RG+ +V F S A+ +
Sbjct: 101 VYVGNLFYDVTAEDLRKQMEKYGVVEQVFITFDNRGISRGFGYVQFDTIESAKRAISAMH 160
Query: 125 QEVVRGRPVKISCA---VPPKKGINSKSRSL 152
V GR V + A V P++ + +R+L
Sbjct: 161 MRVFEGRRVVVQYAQNNVAPQRSMRPATRTL 191
>gi|154309388|ref|XP_001554028.1| hypothetical protein BC1G_07588 [Botryotinia fuckeliana B05.10]
Length = 574
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+++GNLS+D T D+ + F C+ ++R +K + +G+ + +F L AL L+Q
Sbjct: 81 VHLGNLSFDATVGDVNEFFVGCECINVRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNQ 140
Query: 126 EVVRGRPVKISCAVPPK-KGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNV 184
+GR ++IS A PPK +G R L R + D G G + G +S
Sbjct: 141 TQFQGRNIRISVADPPKDRGDRPDVRELGDWSR-KGPLPDLPGRGGERRPSDRGYQSSRF 199
Query: 185 AANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNA 244
G + D GK+R +E KG LS ++ A + G+ N
Sbjct: 200 GEEGGERRAPREPESD-----GKVRDFGNWE--RKGPLSPLAQQERAPRE--GGRPRTND 250
Query: 245 GSRTGNFAD 253
G R F D
Sbjct: 251 GPRAEGFRD 259
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 62 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 121
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 122 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 150
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K TG +G+A+++F D S+ +L LD
Sbjct: 165 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALD 224
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 225 ESLFRGRQIKVVPKRTNRPGISTTDRGFP 253
>gi|385301669|gb|EIF45843.1| nop13p [Dekkera bruxellensis AWRI1499]
Length = 323
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIG 69
RG A ++F T + AL+L + ++G L I+ + + T F +++G
Sbjct: 63 RGFAYVDFTTASKLNAALSLSETNLNGRDLLIKKSDSYDGRPTRKFPVSHNPPSRILFVG 122
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
NL +D TE+ L++ F C +I +R T +++G+ +G+A +DF D S AL+
Sbjct: 123 NLPFDTTEDQLREQFMHCGEIVKIRMATFEDSGKCKGFAFLDFKDEEGPSKALE 176
>gi|157131009|ref|XP_001655775.1| hypothetical protein AaeL_AAEL011963 [Aedes aegypti]
gi|108871684|gb|EAT35909.1| AAEL011963-PA [Aedes aegypti]
Length = 891
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY-- 63
+GK RG F +E V++AL+ D +DG + I K+ R + F K E +
Sbjct: 675 SGKSRGFGYAEFESEQDVQKALSFDRRPLDGRPVFISSLARDKSSRQNKF--KYSEKFEP 732
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA-L 121
N++++ L ++ T +D++KLF K+ +R + +G+ +G A+V++ ++ A L
Sbjct: 733 NKLFVKGLPFEATNDDVRKLFEPYGKLKDVRVVYYR-SGKSKGLAYVEYESEVAAKNAVL 791
Query: 122 KLDQEVVRGRPVKISCAVPPKKG 144
LDQ + G + ++ + PP +G
Sbjct: 792 HLDQHNMNGFTITVAISAPPPRG 814
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 40 KIQPYKATKAKRTSDFTPKIVEGYN---RIYIGNLSWDITEEDLKKLFSDCKISSLRFGT 96
K +P KR PK V+ N R++ NLS++ TE+ ++ F + K S+
Sbjct: 613 KPEPTLEDTTKRIRLDEPKPVDTSNDSKRLFFSNLSFEATEDQIRATFPELKFKSIEL-V 671
Query: 97 NKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKIS 136
+ +G+ RG+ + +F + AL D+ + GRPV IS
Sbjct: 672 HGSSGKSRGFGYAEFESEQDVQKALSFDRRPLDGRPVFIS 711
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IYIGNLS+ +TEEDLK F++ K+S ++ T++ETG RG+A V+ + A++ L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
IY+GNLS+ EED++++FS+ K+S + T++ETG RG+A VD SD+ + +L
Sbjct: 3 IYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAIAEL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGIN 146
D GR +K++ A P + G N
Sbjct: 63 DGAEWLGRELKVNKAKPRESGGN 85
>gi|343429703|emb|CBQ73275.1| related to Cleavage stimulation factor [Sporisorium reilianum SRZ2]
Length = 391
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+++GN+ +D++EE L +F + K+ R +++TG+F+GY +F D + + A++ L
Sbjct: 11 VFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAASAVRNL 70
Query: 124 DQEVVRGRPVKISCA 138
++ V GRP++IS A
Sbjct: 71 NEVEVGGRPLRISFA 85
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
I++G LSW++ +E LK F++ ++ S R +++TG+ +G+ +V+F+D+ S A++ +
Sbjct: 274 IFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETM 333
Query: 124 DQEVVRGRPVKISCAVP 140
+ + GRPV + A P
Sbjct: 334 NGREIDGRPVNLDLATP 350
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDG----LFLKIQPYKATKAKRTSDFTPKIV 60
TGK +G + F + K+A+ ++G E+DG L L +R F
Sbjct: 309 TGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRS 368
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E +++GNL++ T++ + +LF ++ ++R T++++G+ +G+ +V+F+D + S
Sbjct: 369 EPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASK 428
Query: 120 AL-KLDQEVVRGRPVKISCAVP 140
AL +L GR +++ + P
Sbjct: 429 ALNELGGTDFEGRNIRLDFSAP 450
>gi|347837372|emb|CCD51944.1| similar to translation initiation factor eIF4B [Botryotinia
fuckeliana]
Length = 575
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+++GNLS+D T D+ + F C+ ++R +K + +G+ + +F L AL L+Q
Sbjct: 82 VHLGNLSFDATVGDVNEFFVGCECINVRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNQ 141
Query: 126 EVVRGRPVKISCAVPPK-KGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNV 184
+GR ++IS A PPK +G R L R + D G G + G +S
Sbjct: 142 TQFQGRNIRISVADPPKDRGDRPDVRELGDWSR-KGPLPDLPGRGGERRPSDRGYQSSRF 200
Query: 185 AANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNA 244
G + D GK+R +E KG LS ++ A + G+ N
Sbjct: 201 GEEGGERRAPREPESD-----GKVRDFGNWE--RKGPLSPLAQQERAPRE--GGRPRTND 251
Query: 245 GSRTGNFAD 253
G R F D
Sbjct: 252 GPRAEGFRD 260
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I+ + NK TG +GYA+++F+D+ S+ AL L
Sbjct: 73 IFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLS 132
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLG 169
+ + R +K+ C SK R++P R K++ G G
Sbjct: 133 ESFFKKRQIKV-C---------SKRRNIPGFNRP--KISPFRGRG 165
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAK--RTSDFTP 57
TGK RG ++F ++ A + A+A + G E+DG + + +P+ ATK+ R F
Sbjct: 292 TGKSRGYGYVDFSSKSAAENAIAEMQGKEIDGRPINLDLSTGKPH-ATKSNNDRARQFGD 350
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+ + ++IGNLS++ + L ++F + + S R T+ +T + +G+ +V FS
Sbjct: 351 QQSPPSDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDE 410
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
AL+ L+ E + GRP ++ + P
Sbjct: 411 AKAALEALNGEYLEGRPCRLDFSAP 435
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
I+ G LSW+I ++ LK+ F + + S R + TG+ RGY +VDFS + A+ ++
Sbjct: 257 IFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKSRGYGYVDFSSKSAAENAIAEM 316
Query: 124 DQEVVRGRPVKISCA 138
+ + GRP+ + +
Sbjct: 317 QGKEIDGRPINLDLS 331
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTGK RG A + E LDG E G L++ KAK P E
Sbjct: 149 DTGKSRGFAFVTMSCIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKE-----PLYPETE 203
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
+++++GNLSW +T E L + F + + R + ETG RGY V FS + AL
Sbjct: 204 HKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALG 263
Query: 122 KLDQEVVRGRPVKISCA 138
L+ + GR +++S A
Sbjct: 264 ALNDVELEGRAMRVSLA 280
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 5 DTGKFRGIAIINF-RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTG+ RG A + E LDG+E G LK+ A K K + P E
Sbjct: 115 DTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVN--FADKPKPNKE--PLYPETE 170
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++++GNLSW +T E L + F +C + R + +TG RGY V +S + AL+
Sbjct: 171 HKLFVGNLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMETALE 230
Query: 123 -LDQEVVRGRPVKISCA 138
LD + GR ++++ A
Sbjct: 231 SLDGFELEGRAIRVNLA 247
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ-------PYKATKAKRTSDFT 56
+TG RG + + K A+A LDGS++ G ++++ + ++A ++
Sbjct: 18 ETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTDMNFRRRNSEALNSAPMR 77
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
I E ++Y+GNL+W I EDL+ FS + S R +++ G+ R Y + FS +
Sbjct: 78 NLIFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRAYGFLSFSSAA 137
Query: 116 SLSMALKLDQEVVRGRPVKISCAV 139
A+ L+ + RGR + +S +
Sbjct: 138 ECEAAMSLNGKEFRGRSLVVSAGM 161
>gi|444315572|ref|XP_004178443.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
gi|387511483|emb|CCH58924.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
Length = 389
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 21/171 (12%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY-NRI 66
K +G ++F TE ++ ++L +++G L I+ K + + D + + +RI
Sbjct: 164 KIKGFCYMDFETEAQMESVISLSECQLNGRKLLIKNSKNYEGRPNRDDLVSMSKNPPSRI 223
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T+E L+ F C +I +R T ++TG+ +G++ +DF S + ALK D
Sbjct: 224 LFVGNLSYDTTDELLRSHFQHCGEIVKIRTATFEDTGKCKGFSFIDFLTEESATKALK-D 282
Query: 125 Q--EVVRGRPVKISC----------AVPPKKGINSKSRSLPSNKRATSKVT 163
+ + GRP+++ +V PK+G + LP + R ++ T
Sbjct: 283 KSCRKIAGRPIRMEYGEDRSKRVVRSVRPKEGFD-----LPDDYRKENRAT 328
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG ++ T E VK D +++G L + KA ++ P+ E
Sbjct: 172 ETDQSRGFGFVSMSTVEEVVKAIEMFDRYDINGRTLTVN--KAAPRGSRAERPPRDFEPA 229
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GN+ W + L++LFS+ K+ R ++ETG RG+ V S + + A+
Sbjct: 230 FRVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEMEDAIA 289
Query: 122 KLDQEVVRGRPVKISCAVP-PKKG 144
LD + GR +K+S A P++G
Sbjct: 290 ALDGSDLDGRAIKVSMAQERPRRG 313
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
+I++GNL +D+ DL LF+ + S N+ET + RG+ V S + A+++
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 124 -DQEVVRGRPVKISCAVP 140
D+ + GR + ++ A P
Sbjct: 197 FDRYDINGRTLTVNKAAP 214
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE---- 61
T + +GIA + F+ +V A+ L+G ++ G+ + +QP +A + + +
Sbjct: 80 TRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQSASTSSSTLQR 139
Query: 62 ---GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G R+Y+G+L ++ITE+ LK +F KI + + ET +GY + F DS
Sbjct: 140 GNIGPMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDA 199
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL +L+ + GRP+K+
Sbjct: 200 KKALEQLNGFELAGRPMKV 218
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
Query: 6 TGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATK-------AKRTSD 54
+G+ RG A + T E A+K+ +G E+DG L++ + + A+ S+
Sbjct: 196 SGRSRGFAFVTMSTVEEAEAAIKK---FNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSN 252
Query: 55 FTPKIVEGYNRIYIGNLSWDITEEDLKK-LFSDCKISSLRFGTNKETGEFRGYAHVDFSD 113
F V+ +++Y+GNL+W +T E L++ L + + ++ETG RG+ V FS
Sbjct: 253 FG-GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSS 311
Query: 114 SLSLSMAL-KLDQEVVRGRPVKISCA 138
+ A+ ++D V GR ++++ A
Sbjct: 312 EAEVEAAVSEMDGLEVEGRSIRVNVA 337
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSL-RFGTNKETGEFRGYAHVDFSDSL 115
P + EG ++Y+GNL +DI E L K+F + + + ++ +G RG+A V S
Sbjct: 153 PPLPEG-TKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMSTVE 211
Query: 116 SLSMAL-KLDQEVVRGRPVKISCA-VPPKKGINSKSRSLPSN 155
A+ K + + GR ++++ VP + S +RS PSN
Sbjct: 212 EAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARS-PSN 252
>gi|427781559|gb|JAA56231.1| Putative eukaryotic translation initiation factor 4b [Rhipicephalus
pulchellus]
Length = 539
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK-ETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNL +D+ +ED+ K F K+SS+R + G RG+ + +F D +L AL +
Sbjct: 91 VYLGNLPYDVCDEDVIKFFRGLKVSSVRLPRESGDRGRMRGFGYAEFPDRSTLLEALGYN 150
Query: 125 QEVVRGRPVKISCA 138
E ++ R +K+S A
Sbjct: 151 NENLKSRSIKVSLA 164
>gi|307173239|gb|EFN64292.1| Eukaryotic translation initiation factor 4B [Camponotus floridanus]
Length = 513
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
YI NL +D+ E DL + F++ KIS++R K+ + RGY +V+F D SL AL +
Sbjct: 86 YISNLPYDVDEADLAEFFAEMKISNMRLP--KDANKIRGYGYVEFEDRQSLIDALSMTNT 143
Query: 127 VVRGRPVKISCA 138
++ R V+I +
Sbjct: 144 TIKTRRVRIEVS 155
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ---PYKATKAK-RTSDFTPKI 59
+TG+ +G + F +A + E+DG L + P + A R + F K
Sbjct: 271 ETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKR 330
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
N ++IGNLS+D T E ++++F++ ++ + T++++G +G+ +VDF +
Sbjct: 331 SAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEAT 390
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
AL+ L + V GRP+++ A P
Sbjct: 391 AALEALHGQDVAGRPLRVDFAAP 413
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 50 KRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAH 108
K+T P +G +++GNLSW+I E+ L++ F S +I R T++ETG +G+ +
Sbjct: 221 KKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGY 280
Query: 109 VDFSDSLSLSMALKLDQEV-VRGRPVKISCAVPPKKG-INSKS------RSLPSN 155
V+F+ + + A K E + GRP+ + + P +K N+++ RS PSN
Sbjct: 281 VEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSN 335
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K K + EG
Sbjct: 232 SGRSKGVGYVEFKNEESVPVAIQLTGQKLLGIPIIAQFTEAEKNKAARN-----AEGHVS 286
Query: 63 -------YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSL 115
++R+Y+GN+ + ITE DL+ +F E G RGY V F D
Sbjct: 287 GNQNSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 346
Query: 116 SLSMAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 347 QAREALEKMNGFDLAGRPIRV 367
>gi|121719870|ref|XP_001276633.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119404845|gb|EAW15207.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 306
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 21/126 (16%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNR 65
G RG A + F + A +RA+ DG+ + L + +R TS + ++G+
Sbjct: 160 GMSRGFAYVQFESVEAARRAI--DGTHLQTL----------EGRRVTSQYAQTNMDGHRS 207
Query: 66 I-------YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+ YIGNLS+++T+ DL LF D + +R ++ TG+ RG+AH +F D+ S
Sbjct: 208 LQPVSRTLYIGNLSFEMTDRDLNDLFKDVSNVIDVRVSIDRRTGQPRGFAHAEFIDAESA 267
Query: 118 SMALKL 123
L++
Sbjct: 268 QKGLEI 273
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS--------DFTPKIVE 61
+GIA I F +V A+ L G + G+ + +Q +A K + + + K +
Sbjct: 80 KGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKGMM 139
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G R+Y+G+L ++ITEE L+ +F +I +++ + +TG +GY + F+D+ A
Sbjct: 140 GPLRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKA 199
Query: 121 L-KLDQEVVRGRPVKI 135
L +L+ + GRP+K+
Sbjct: 200 LEQLNGFELAGRPMKV 215
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT------PKIVEGY 63
+G+ + F+ E +V +AL L G ++ G+ + +Q +A K ++ + P + +
Sbjct: 226 KGVGYVEFKNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATGAHPNSIP-F 284
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-K 122
+R+Y+GN+ +++TE+DL+ +F + G RGY V + ++ AL K
Sbjct: 285 HRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEK 344
Query: 123 LDQEVVRGRPVKISC 137
++ + GRP+++
Sbjct: 345 MNGFDLAGRPIRVGL 359
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ---PYKATKAK-RTSDFTPKI 59
+TG+ +G + F +A + E+DG L + P + A R + F K
Sbjct: 284 ETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKR 343
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
N ++IGNLS+D T E ++++F++ ++ + T++++G +G+ +VDF +
Sbjct: 344 SAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEAT 403
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
AL+ L + V GRP+++ A P
Sbjct: 404 AALEALQGQDVAGRPLRVDFAAP 426
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 50 KRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAH 108
K+T P +G +++GNLSW+I E+ L++ F S +I R T++ETG +G+ +
Sbjct: 234 KKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGY 293
Query: 109 VDFSDSLSLSMALKLDQEV-VRGRPVKISCAVPPKKG-INSKS------RSLPSN 155
V+F+ + + A K E + GRP+ + + P +K N+++ RS PSN
Sbjct: 294 VEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANARANKFGDKRSAPSN 348
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ----PYKATKAKRTSDFTPKIV 60
TG+ RG A + T+ A+ +G E G L++ P K + A R K
Sbjct: 150 TGRSRGFAFVTMATQADADEAVEKFNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPS 209
Query: 61 EGYN---RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
YN R+++GNL W + L++LFSD K+ + ++ETG RG+ V S
Sbjct: 210 GNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQE 269
Query: 117 LSMAL-KLDQEVVRGRPVKISCA 138
+ A+ LD + GR +K++ A
Sbjct: 270 IEEAISSLDGSDMDGRQIKVTLA 292
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-K 122
++++GNL W + +L +LF D ++ + +++TG RG+A V + A+ K
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 123 LDQEVVRGRPVKISCAVPPKK 143
+ +GR ++++ PP K
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPK 194
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 66 IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IYIGNL++ TE+DL+K F S +++S+R T+K +G+ RG A V+ ++ + A+ L
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRS 151
+ +RGR +K++ A+ PKK KSRS
Sbjct: 63 NGTQIRGREIKVNEAL-PKKPFPEKSRS 89
>gi|367002824|ref|XP_003686146.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
gi|357524446|emb|CCE63712.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
Length = 400
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDG--LFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
K +G I+F+T ++ A+AL +E++G L +K A + + SD +R
Sbjct: 175 KNKGFCYIDFKTLEQMESAIALSETELNGRKLLIKSSTDYAGRPDK-SDLVSMSKNPPSR 233
Query: 66 I-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
I ++GNLS+D T+E L+K F C I +R T +++G+ +G+A VDF + + AL
Sbjct: 234 ILFVGNLSFDTTDELLRKHFQHCGDIVKIRMATFQDSGKCKGFAFVDFKNEEGATKALS- 292
Query: 124 DQEV--VRGRPVKISCAVPPKKGINSKSRSLPSNKR 157
D+ + GRP+++ K + K + P++KR
Sbjct: 293 DKSCRKIAGRPLRMEFGEDRSKRV-VKRKEQPASKR 327
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
T + RG A + + K A+ + DGS++ G +K+ + + + PKI Y
Sbjct: 27 TDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYR 86
Query: 65 -------RIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+IY GNLSW +T E L+ F+D + + +E+G RG+ + F+ + +
Sbjct: 87 GFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAEN 146
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
AL EV V GRP++++ A
Sbjct: 147 AESALNAMNEVEVEGRPLRLNLA 169
>gi|449679895|ref|XP_002164621.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Hydra magnipapillata]
Length = 430
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
GK +G A + F+++ +V +L LD + G + + + T P ++ + +
Sbjct: 217 GKSKGYAYLQFKSKLSVDSSLLLDRESILGRPMFVSRCVDKQNNPTKFKFPTQLDKHT-L 275
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKLD 124
Y+ NL +++T + + + FS K+ +R TN+ +G+ +GYA+V++ S++ + S +KLD
Sbjct: 276 YVSNLPFEMTADQVTEHFSKIGKLKQVRLVTNR-SGKSKGYAYVEYESEADAQSAIVKLD 334
Query: 125 QEVVRGRPVKISCAVPPKKGI 145
Q + RP+ +S + PP + I
Sbjct: 335 QVPLNDRPINVSLSNPPARKI 355
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 89 ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAV 139
I ++R N+ G+ +GYA++ F LS+ +L LD+E + GRP+ +S V
Sbjct: 206 IDTIRIVKNR-AGKSKGYAYLQFKSKLSVDSSLLLDRESILGRPMFVSRCV 255
>gi|363739959|ref|XP_415181.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Gallus gallus]
Length = 915
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Query: 56 TPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYA 107
PK++ ++ +++ NLS+++T+ + LK+LF C ++S +R +NK G FRGY
Sbjct: 644 VPKVLHDSSKDNITVFVSNLSYNMTDPEVKLKELFESCGEVSQVRPVFSNK--GTFRGYC 701
Query: 108 HVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+V+F D S AL +D++VV GRP+ +S V K + K
Sbjct: 702 YVEFKDEKSALQALGMDRKVVEGRPMFVSPCVDKNKNPDFK 742
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 76 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 135
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 136 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 164
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 6 TGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
TG+ RG A + T E +K LDGS G +++ K K P E
Sbjct: 182 TGRSRGFAFVTMSTIEDCEQVIKN---LDGSLYSGRTMRVNFADKPKPK-----LPLYPE 233
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++++GNLSW +T E L ++F C + R + ETG RGY V +S + A
Sbjct: 234 TEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEA 293
Query: 121 L-KLDQEVVRGRPVKISCAV 139
L L+ + GR ++++ A+
Sbjct: 294 LSSLNGTELEGREIRVNLAL 313
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNR 65
+ +GIA F V A+ L ++ G+ + +Q +A K A S K G R
Sbjct: 86 RHKGIAYCEFTDASCVPMAIGLTNQKLLGVPIIVQASQAEKNRAAANSQNLQKGSSGPMR 145
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+Y+G+L ++ITE+ L+ +F KI +++ + ETG +GY + F D+ AL +L
Sbjct: 146 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQL 205
Query: 124 DQEVVRGRPVKI 135
+ + GRP+K+
Sbjct: 206 NGFELAGRPMKV 217
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ LS + +DL+ FS K+ +R ++ + +G A+ +F+D+ + MA+ L
Sbjct: 49 VFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIAYCEFTDASCVPMAIGLT 108
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSL 152
+ + G P+ + + K + S++L
Sbjct: 109 NQKLLGVPIIVQASQAEKNRAAANSQNL 136
>gi|157073925|ref|NP_001096677.1| eukaryotic translation initiation factor 4H [Xenopus (Silurana)
tropicalis]
gi|89271950|emb|CAJ82417.1| Williams-Beuren syndrome chromosome region 1 homolog [Xenopus
(Silurana) tropicalis]
gi|170284626|gb|AAI61219.1| eif4h protein [Xenopus (Silurana) tropicalis]
Length = 252
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL + + + D+ +F D I S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFHVVQGDIDNIFKDLSIRSVRLVRDKETDKFKGFCYVEFDDLDSLKEALTYDGA 104
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 105 IFIDRAIRVDIA 116
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+YIGN+ +++T+ DL +LF D I +R ++ TG RG+ H DF+D S A L
Sbjct: 236 LYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLL 295
Query: 124 DQEVVRGRP---------VKISCAVPPKK 143
+ GRP +KI A PPK+
Sbjct: 296 STKTPYGRPLRIDYSHSNIKIQPAGPPKR 324
>gi|296424329|ref|XP_002841701.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637948|emb|CAZ85892.1| unnamed protein product [Tuber melanosporum]
Length = 405
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-------ISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
++IGNL++ +T+ DL+ F+ I+ + TN +T +G+A+VDFS+ SL+
Sbjct: 105 VWIGNLAFSVTKPDLETFFTKPPSTIPRVGITRINLPTNPQTRRNKGFAYVDFSNQESLN 164
Query: 119 MALKLDQEVVRGRPVKISCA 138
AL L + + GRPV I A
Sbjct: 165 YALILTETLWNGRPVLIKNA 184
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP---- 57
T P T + +G A ++F + ++ AL L + +G +P AK S TP
Sbjct: 142 TNPQTRRNKGFAYVDFSNQESLNYALILTETLWNG-----RPVLIKNAKDFSSRTPTSAI 196
Query: 58 KIVEGYNR------IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
K+ ++ +++GNL + EEDL K F+ KI +R T ++TG+ +G+ VD
Sbjct: 197 KVGADLSKNPPSRILWVGNLDFITKEEDLAKHFAFAGKIVKVRLTTFEDTGKCKGFGFVD 256
Query: 111 FSDSLSLSMAL 121
F D S+ A+
Sbjct: 257 FEDEESVKRAM 267
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+TGK RG A + + E K LDGS G L++ K K P E
Sbjct: 138 NTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKE-----PLYPETE 192
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNLSW +T E L + F + + R + ETG+ RGY V +S + AL+
Sbjct: 193 YKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALE 252
Query: 123 LDQEV-VRGRPVKISCA 138
E+ + GR +++S A
Sbjct: 253 TINELELEGRVIRVSLA 269
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 287 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPT 346
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++YIG L ITE+ L+++F KI +L T+ +G +GYA+V F +
Sbjct: 347 NTTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDA 405
Query: 118 SMAL-KLDQEVVRGRPVKI 135
A+ +++ + GRP+K+
Sbjct: 406 KRAMEQMNGFELAGRPMKV 424
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN- 64
+G+ +G+ + F++E +V A+ L G ++ G+ + Q +A K ++ + P+ G+N
Sbjct: 213 SGRSKGVGYVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGHNH 270
Query: 65 -----RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
R+Y+GN+ + ITE DL+ +F L F E G +GY V F D
Sbjct: 271 AAPFHRLYVGNIHFSITENDLQNVFE--PFGELEFVQLQKDEAGRSKGYGFVQFRDPNQA 328
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 329 REALEKMNGFDLAGRAIRV 347
>gi|391335516|ref|XP_003742137.1| PREDICTED: eukaryotic translation initiation factor 4H-like
[Metaseiulus occidentalis]
Length = 265
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL + + D+ ++F+ I S+R +KET F+GY +V+F +L AL D+
Sbjct: 26 YVGNLPERVVQADIDEIFNGLNIRSIRLVRDKETDRFKGYCYVEFDSRDTLERALDYDEA 85
Query: 127 VVRGRPVKISCA 138
V G+ +K+ A
Sbjct: 86 QVNGKVIKVDIA 97
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F G FRG + F + +V AL LD +++G + + P + DF V
Sbjct: 722 FTGKGSFRGYGYVQFESPVSVPEALKLDRRDVEGRPVFVSP--CVDKNKNPDFK---VFK 776
Query: 63 YN------RIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFS 112
YN +I+I L + T+E L ++ CK + +R T + +G+ +G A+V+F+
Sbjct: 777 YNTMMEKHKIFISGLPFSCTKEQLAEI---CKNHGTVKEVRLVTYR-SGKPKGLAYVEFA 832
Query: 113 DSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSK-SRSLPSNKRATSKVTDSAGLGT 170
D S A LKLD V G + ++ + PP++ K S P+ +V + G G
Sbjct: 833 DETQASQAVLKLDGIEVEGNKISVAISNPPRRNATDKPGSSRPTGDAMPRQVYGARGKGR 892
Query: 171 S 171
+
Sbjct: 893 T 893
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 51 RTSDFTPKIVEGYNRIYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGY 106
R ++ P++ + +++ NL++ + E + L+ LF C I +R T K G FRGY
Sbjct: 674 RQNEDNPELRNDNSSVFVSNLAYTLEEPEAKLRTLFETCGPIKQIRPIFTGK--GSFRGY 731
Query: 107 AHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+V F +S+ ALKLD+ V GRPV +S V K + K
Sbjct: 732 GYVQFESPVSVPEALKLDRRDVEGRPVFVSPCVDKNKNPDFK 773
>gi|330914835|ref|XP_003296804.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
gi|311330893|gb|EFQ95099.1| hypothetical protein PTT_06993 [Pyrenophora teres f. teres 0-1]
Length = 326
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S++++++DL LF D + + +R ++ TG+ RG+AH DF D S + A + L
Sbjct: 235 LFIGNMSFEMSDKDLNDLFRDIRNVMDVRVAIDRRTGQPRGFAHADFIDVASATKAKEVL 294
Query: 124 DQEVVRGRPVKI 135
++++ GR ++I
Sbjct: 295 SEKIIYGRQLRI 306
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
P+ E +YIGNL +++T + LK++FS ++ S++ + G RG+ +V+F +
Sbjct: 129 PRSTEPNKMLYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNR-GLSRGFGYVEFGNLA 187
Query: 116 SLSMAL-KLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
A+ LD +V GR + + P NS SRS
Sbjct: 188 DAQAAIDNLDMQVFEGRNMVVQYHQPKP---NSMSRS 221
>gi|453089609|gb|EMF17649.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 337
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S+++++ DL LF + K + +R ++ +G+ RG+AH DF+D S A + L
Sbjct: 255 LFIGNMSYEMSDRDLNNLFREIKNVLDVRVAIDRRSGQPRGFAHADFTDVESAEKAKEFL 314
Query: 124 DQEVVRGRPVKISCAVPPKK 143
++V GR +++ A P K
Sbjct: 315 GSKMVYGRQLRVDFAAEPSK 334
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+YIGN+ +++T+ DL +LF D I +R ++ TG RG+ H DF+D S A L
Sbjct: 236 LYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLL 295
Query: 124 DQEVVRGRP---------VKISCAVPPKK 143
+ GRP +KI A PPK+
Sbjct: 296 STKTPYGRPLRIDYSHSNIKIQPAGPPKR 324
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 6 TGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
TG+ RG A + T E +K LDGS G +++ K K P E
Sbjct: 184 TGRSRGFAFVTMSTIEDCEQVIKN---LDGSLYSGRTMRVNFADKPKPK-----LPLYPE 235
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++++GNLSW +T E L ++F C + R + ETG RGY V +S + A
Sbjct: 236 TEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEA 295
Query: 121 L-KLDQEVVRGRPVKISCAV 139
L L+ + GR ++++ A+
Sbjct: 296 LSSLNGTELEGREIRVNLAL 315
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKA--------TKAKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A T A
Sbjct: 82 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 141
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 142 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 201
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 202 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 261
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + + S++AA A
Sbjct: 262 SGTASSTGLTTAASFNGGVSTISSLAAPA 290
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ ++ TE D+ + FS K+ +R ++ + RG +V+F D++S+ MA+ L
Sbjct: 43 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 102
Query: 125 QEVVRGRPVKI 135
+ + G+PV +
Sbjct: 103 GQPLLGQPVMV 113
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPK 58
D G+ RG ++F T E A K A+ GSE+D L + +P + R +D K
Sbjct: 303 DGGRSRGFGYVDFETAEAATKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKK 362
Query: 59 ----IVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFS 112
+ ++IGNL +D +E +++ F++ +++S+R T+ ++G +G+ +V F+
Sbjct: 363 HGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFT 421
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 45 KATKAKRTSDFTPKIV----EGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKE 99
K KA+ D TPK + + ++ GNLSW+I + L + F + + R T+++
Sbjct: 244 KKRKAEEEIDATPKKAKTDEQAASTLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRD 303
Query: 100 TGEFRGYAHVDFSDSLSLSMALKLDQ-EVVRGRPVKISCA 138
G RG+ +VDF + + + A + Q + RP+ + A
Sbjct: 304 GGRSRGFGYVDFETAEAATKAYEAMQGSELDSRPLNLDYA 343
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 7 GKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
G RG+A + F+TE +AL G+E++G + I DFT + + N+
Sbjct: 403 GNSRGMAYVEFKTEAEADKALEEKQGTEIEGRAVVI------------DFTGEKSQQENQ 450
Query: 66 ------IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ + NLS+ TEE L+++F K SS+R N + G +GYA VDF+ +
Sbjct: 451 KGESTTLIVNNLSYAATEETLQEVFK--KASSIRVPQNNQ-GRPKGYAFVDFATAEDAKE 507
Query: 120 ALK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADN-- 176
AL L+ + GR +++ + P + N+ +R SK GL +
Sbjct: 508 ALNSLNNTEIEGRTIRLEFSSPSWQKGNTNARGGGGGFGQQSKTLFVRGLSEDTTEETLR 567
Query: 177 ---SGAVTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGE 218
G++++ + + +G+S +D S+ + E GE
Sbjct: 568 ESFEGSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGE 612
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+ G+ +G A ++F T K AL +L+ +E++G ++++ + K ++
Sbjct: 487 NQGRPKGYAFVDFATAEDAKEALNSLNNTEIEGRTIRLEFSSPSWQKGNTNARGGGGGFG 546
Query: 64 NR---IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFS 112
+ +++ LS D TEE L++ F S R T+++TG +G+ VDFS
Sbjct: 547 QQSKTLFVRGLSEDTTEETLRESFEGS--ISARIVTDRDTGSSKGFGFVDFS 596
>gi|307202682|gb|EFN81988.1| Eukaryotic translation initiation factor 4B [Harpegnathos saltator]
Length = 522
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
YI NL +DI E DL + FS+ KIS +R K+ + RGY +V+F D SL AL +
Sbjct: 85 YISNLPYDIDESDLVEFFSEMKISGMRLP--KDASKSRGYGYVEFEDRPSLIDALSMTNT 142
Query: 127 VVRGRPVKISCA 138
++ R V+I +
Sbjct: 143 TIKTRRVRIEVS 154
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GNLSW++ EE L++ F + ++S +R T +E+G RG+ +V+++D+ S A +
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 125 QEV-VRGRPVKISCAVP-------PKKGINSKSRSL 152
++ + GR + + A P P++ +++RS
Sbjct: 293 KDAEIDGRTINLDYAKPRDANNQAPREKAQNRARSF 328
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI----------QPYKATKA 49
MT ++G+ RG + + + K A A +E+DG + + Q +
Sbjct: 263 MTERESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPRDANNQAPREKAQ 322
Query: 50 KRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFS-DCKISSLRFGTNKETGEFRGYAH 108
R F + N +++GNL + + E ++++F +I +R T+ ETG +GY +
Sbjct: 323 NRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGY 382
Query: 109 VDFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
V+FS AL L + GR +++ + P
Sbjct: 383 VEFSSVDEARQALNDLQGTDIGGRAIRLDFSTP 415
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+TG+ RG A + + + + LDGS+ G L++ A K K P E
Sbjct: 143 ETGRSRGFAFVTMSSIEDCETVIENLDGSQYMGRILRVN--FADKPKPKEPLYP---ETE 197
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++IGNLSW +T E L + F + + R + ETG+ RGY V +S L AL+
Sbjct: 198 YKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQ 257
Query: 123 -LDQEVVRGRPVKISCA 138
L+ + GR +++S A
Sbjct: 258 SLNGVELEGRALRVSLA 274
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
TGK RG ++F T A K+A G E+DG ++I P R F +
Sbjct: 240 TGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRIDLSTPKGDVTDNRAKKFNDQRSA 299
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ ++IGNLS+DI+E+D+ FS+ ++S +R + ++G +G+ +V+F+ S A
Sbjct: 300 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 359
Query: 121 LK-LDQEVVRGRPVKISCAVP 140
+ + + + GRP+++ + P
Sbjct: 360 IDAMTGQELAGRPLRLDFSTP 380
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 64 NRIYIGNLSWDITEEDLK-KLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N+I++G LSW++ E LK ++ + +++S R ++ TG+ RG+ +VDF+ + + A +
Sbjct: 203 NQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFE 262
Query: 123 LDQ-EVVRGRPVKISCAVP 140
Q + V GR ++I + P
Sbjct: 263 EGQGKEVDGRAIRIDLSTP 281
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
Query: 6 TGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATK-------AKRTSD 54
+G+ RG A + T E A+K+ +G E+DG L++ + + A+ S+
Sbjct: 204 SGRSRGFAFVTMSTVEEAEAAIKK---FNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSN 260
Query: 55 FTPKIVEGYNRIYIGNLSWDITEEDLKK-LFSDCKISSLRFGTNKETGEFRGYAHVDFSD 113
F V+ +++Y+GNL+W +T E L++ L + + ++ETG RG+ V FS
Sbjct: 261 FG-GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSS 319
Query: 114 SLSLSMAL-KLDQEVVRGRPVKISCA 138
+ A+ ++D V GR ++++ A
Sbjct: 320 EAEVEAAVSEMDGLEVEGRSIRVNVA 345
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSL-RFGTNKETGEFRGYAHVDFSDSL 115
P + EG ++Y+GNL +DI E L K+F + + + ++ +G RG+A V S
Sbjct: 161 PPLPEG-TKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMSTVE 219
Query: 116 SLSMAL-KLDQEVVRGRPVKISCA-VPPKKGINSKSRSLPSN 155
A+ K + + GR ++++ VP + S +RS PSN
Sbjct: 220 EAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARS-PSN 260
>gi|443705094|gb|ELU01797.1| hypothetical protein CAPTEDRAFT_224491 [Capitella teleta]
Length = 253
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ ++F + I +R ++ET +F+GYA+V+F+D SL AL +
Sbjct: 10 YVGNLPHNLIQGDIDQIFKNMSIKGIRMVRDRETDKFKGYAYVEFADRESLEEALSFNDA 69
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 70 LFEDRYLRVDIA 81
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
T + RG A + + K A+ + DGS++ G +K+ + + + PKI Y
Sbjct: 140 TDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYR 199
Query: 65 -------RIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+IY GNLSW +T E L+ F+D + + +E+G RG+ + F+ + +
Sbjct: 200 GFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAEN 259
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
AL EV V GRP++++ A
Sbjct: 260 AESALNAMNEVEVEGRPLRLNLA 282
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN- 64
+G+ +G+ + F++E +V A+ L G ++ G+ + Q +A K ++ + P+ G+N
Sbjct: 213 SGRSKGVGYVEFKSEESVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARN--PEASSGHNH 270
Query: 65 -----RIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
R+Y+GN+ + ITE DL+ +F L F E G +GY V F D
Sbjct: 271 AAPFHRLYVGNIHFSITENDLQNVFE--PFGELEFVQLQKDEAGRSKGYGFVQFRDPNQA 328
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 329 REALEKMNGFDLAGRAIRV 347
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
TGK RG ++F T A K+A G E+DG +++ P R F +
Sbjct: 244 TGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRLDLSTPKGDVTENRAKKFNDQRSA 303
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ ++IGNLS+DI+E+D+ FS+ ++S +R + ++G +G+ +V+F+ S A
Sbjct: 304 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 363
Query: 121 LK-LDQEVVRGRPVKISCAVP 140
L + + + GRP+++ + P
Sbjct: 364 LDAMTGQELAGRPLRLDFSTP 384
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 64 NRIYIGNLSWDITEEDLK---KLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
N++++G LSW++ + LK ++F + ++S R ++ TG+ RG+ +VDF+ + + A
Sbjct: 207 NQVWVGQLSWNVDNDWLKSEMEVFGE--VTSARVQLDRTTGKSRGFGYVDFATAAAAKKA 264
Query: 121 LKLDQ-EVVRGRPVKISCAVP 140
+ Q + V GR +++ + P
Sbjct: 265 FEEGQGKEVDGRAIRLDLSTP 285
>gi|77748495|gb|AAI06566.1| MGC68480 protein [Xenopus laevis]
Length = 232
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDNIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTFDGA 104
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 105 IFIDRAIRVDIA 116
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
++G+ RG A + T+ + + LDG ++ G LK+ + +K R S P+ EGY
Sbjct: 36 ESGRSRGFAFVTMATQEDAENVIERLDGHDVGGRPLKVS-FPQSKQNRPS--FPR-GEGY 91
Query: 64 ---------------NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYA 107
N++++GNLSW + L++LFSD K+ R ++E+G RG+
Sbjct: 92 QRSERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFG 151
Query: 108 HVDFSDSLSLSMAL-KLDQEVVRGRPVKISCA 138
V +SD + A+ LD GR ++++ A
Sbjct: 152 FVTYSDVSEVDAAIDSLDGAEFDGRELRVNLA 183
>gi|126324351|ref|XP_001376283.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Monodelphis domestica]
Length = 959
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT----PK 58
F + G FRG + F+ E A +AL+LD +DG + + P + DF
Sbjct: 736 FSNRGDFRGYCYVEFKEEKAALQALSLDRKMVDGRPMFVSP--CVDKNKNPDFKVFRYST 793
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDS 114
+E + +++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 794 ALEKH-KLFISGLPFSCTKEELEDI---CKVHGNVKDLRLVTNR-AGKPKGLAYVEYENE 848
Query: 115 LSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
S A LK+D ++ +K++ + PP++ + + +
Sbjct: 849 SQASQAVLKMDGMTIKQNVIKVAISNPPQRKLPDRPEA 886
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 36 GLFLKIQPYKA-------TKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKK 82
GLF + +P + +A PK+ N+ +++ NL + + E D L+
Sbjct: 662 GLFGRSEPTEVDPPSKQKERAAAIRKEMPKVFHDSNKDNITVFVSNLPYGLGEPDVKLRP 721
Query: 83 LFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVP 140
LF +++ +R +N+ G+FRGY +V+F + + AL LD+++V GRP+ +S V
Sbjct: 722 LFEPFGEVTEIRPIFSNR--GDFRGYCYVEFKEEKAALQALSLDRKMVDGRPMFVSPCVD 779
Query: 141 PKKGINSK 148
K + K
Sbjct: 780 KNKNPDFK 787
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ ++ LD
Sbjct: 206 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSMALD 265
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 266 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 294
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
IY+GNLS+D+TEEDL+ +FSD ++ + ++ET RG+ V+ SDS + L
Sbjct: 3 IYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVEMSSDSEEETAIETL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSR 150
D GR +K++ A P ++G N ++R
Sbjct: 63 DGAQWMGRQMKVNKAKPREEGGNRRAR 89
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A I F+ + + +AL L+G + L++ K D +++GNL
Sbjct: 367 AYIVFKEQESATKALKLNGEKFLNFHLRVDSLHPGVKKCHDD--------KRSVFLGNLP 418
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
++ E++++ F +C ++ ++R ++ TG +G+ V F D ++ +ALK+ +EV RGR
Sbjct: 419 LEVQEDEVRLHFQECGEVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLALKMHEEVFRGR 478
Query: 132 PVKI 135
+++
Sbjct: 479 KLRV 482
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 60 VEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+E NR +YIGN+ + T E+L++ F C I+ + NK G +G+A+++F D S+
Sbjct: 91 IETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSV 150
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSR 150
A+ +D+ + RGR +K+ K G+++ +R
Sbjct: 151 QTAMAMDESLFRGRQIKVMPKRTNKPGLSTTNR 183
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
TGK RG ++F ++ ++AL G E+DG + + +P K R F +
Sbjct: 40 TGKSRGYGYVDFESKADAEKALQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVV 99
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+ ++IGNLS++ T + L + F ++ S R T+ +T + +G+ +V +
Sbjct: 100 SAPSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAK 159
Query: 119 MALK-LDQEVVRGRPVKISCAVPPKKGINSKSR 150
AL+ L+ E + GRP ++ + P + K R
Sbjct: 160 AALEALNGEYIEGRPCRLDYSTPRDPASSQKPR 192
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW+I ++ LK+ F + S R + TG+ RGY +VDF AL+
Sbjct: 5 LFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKALQDF 64
Query: 125 Q-EVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
Q + + GRP+ + + SK ++ N RA
Sbjct: 65 QGKEIDGRPINLDLST-------SKPQTPAKNDRA 92
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS-DSLSLSMAL 121
N++++GN+SWD T+ DL KLF++ ++ S + +K TG RG+ V+ + D L+ +
Sbjct: 3 NKLFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIK 62
Query: 122 KLDQEVVRGRPVKISCAVP 140
LD + GRP+ ++ A P
Sbjct: 63 ALDGKDFLGRPITVNVARP 81
>gi|50423811|ref|XP_460490.1| DEHA2F02860p [Debaryomyces hansenii CBS767]
gi|49656159|emb|CAG88803.1| DEHA2F02860p [Debaryomyces hansenii CBS767]
Length = 387
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
K +G A ++ + V ++L S ++G L I+ + + + D P +RI
Sbjct: 164 NKIKGFAYVDLPSAKHVDTVISLSESHLNGRNLLIKNANSFEGRPQKDTNPLSKNPPSRI 223
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL--K 122
++GNLS+D T++ L++ F C I +R T ++TG+ +G+A +DF D + AL K
Sbjct: 224 LFVGNLSFDTTQDLLREHFRHCGDIVKIRMATFEDTGKCKGFAFIDFRDESGPTTALKSK 283
Query: 123 LDQEVVRGRPVKIS-----CAVPPKKGINSKSRSLPSNKRATSK 161
L + ++ RP+++ + PKK ++ PS + + S+
Sbjct: 284 LAKSLI-NRPLRLEYGEDRSKLTPKKFARNRDNFEPSEQDSISQ 326
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 66 IYIGNLSWDITEEDLKKLF--------SD-----CKISS---LRFGTNKETGEFRGYAHV 109
++IGNLS+D T+ED+ + +D KI +R K+ + +G+A+V
Sbjct: 113 VWIGNLSFDTTKEDITRFIMGKTNAYDADSNDGLVKIEQSDFIRINIPKKENKIKGFAYV 172
Query: 110 DFSDSLSLSMALKLDQEVVRGRPVKISCAVP----PKKGINSKSRSLPS 154
D + + + L + + GR + I A P+K N S++ PS
Sbjct: 173 DLPSAKHVDTVISLSESHLNGRNLLIKNANSFEGRPQKDTNPLSKNPPS 221
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 56 TPKIVE-GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
TP++ G +++GNLS+ + +ED++ F D ++ +RF ++ + G F+G+ HV+F+
Sbjct: 393 TPQVESTGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDAD-GRFKGFGHVEFAT 451
Query: 114 SLSLSMALKLDQEVVRGRPVKISCA 138
+ ALK++ + + GR V++ A
Sbjct: 452 PEAAQKALKMNGKDLLGRAVRLDLA 476
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---------PYKATKA----KRTS 53
G+F+G + F T A ++AL ++G ++ G +++ PY ++ K S
Sbjct: 439 GRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLARERGAYTPYSGKESNSFQKGGS 498
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
V G+++ + D L++ F C IS + + E+G +G A++DF+
Sbjct: 499 QAQTIFVRGFDK----SGDEDQVRSTLEEYFGSCGDISRISIPKDYESGSVKGIAYMDFT 554
Query: 113 DSLSLSMALKLD 124
D S + AL+L+
Sbjct: 555 DGDSFNKALELN 566
>gi|167765441|ref|ZP_02437554.1| hypothetical protein BACSTE_03831 [Bacteroides stercoris ATCC
43183]
gi|218128444|ref|ZP_03457248.1| hypothetical protein BACEGG_00012 [Bacteroides eggerthii DSM 20697]
gi|317475729|ref|ZP_07934988.1| RNA recognition domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|167697069|gb|EDS13648.1| hypothetical protein BACSTE_03831 [Bacteroides stercoris ATCC
43183]
gi|217989335|gb|EEC55648.1| hypothetical protein BACEGG_00012 [Bacteroides eggerthii DSM 20697]
gi|316908112|gb|EFV29807.1| RNA recognition domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 82
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNL++ + E+DL+K+ D +SS++F ++ TG FRG A V+ DS + + A+ +L
Sbjct: 3 IYVGNLNYRVKEDDLQKVMEDYGTVSSVKFIMDRATGRFRGIAFVEMEDSAAAAKAISEL 62
Query: 124 DQEVVRGRPVKISCAVPPK 142
D GR + + A PPK
Sbjct: 63 DGAEFFGRQMVVKEARPPK 81
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 11/94 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I+ + NK TG +GYA+++F+D+ S+ AL L
Sbjct: 73 IFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLS 132
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
+ + R +K+ C SK R++P R
Sbjct: 133 ESFFKKRQIKV-C---------SKRRNIPGFNRP 156
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
D+GK RG A + E LDG E G L++ K K P E
Sbjct: 137 DSGKSRGFAFVTMSCVEDCNTVIENLDGKEFLGRTLRVNLSDKPKPKE-----PLYPETE 191
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
+++++GNLSW +T E L ++F + + R + ETG RGY V +S L AL
Sbjct: 192 HKLFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETALI 251
Query: 122 KLDQEVVRGRPVKISCA 138
L+ + GR +++S A
Sbjct: 252 SLNNVELEGRAIRVSLA 268
>gi|148226328|ref|NP_001083502.1| uncharacterized protein LOC398961 [Xenopus laevis]
gi|38051913|gb|AAH60394.1| MGC68480 protein [Xenopus laevis]
Length = 250
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDNIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTFDGA 104
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 105 IFIDRAIRVDIA 116
>gi|157167395|ref|XP_001653904.1| hypothetical protein AaeL_AAEL009646 [Aedes aegypti]
gi|108874228|gb|EAT38453.1| AAEL009646-PA [Aedes aegypti]
Length = 582
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNK--ETGEFRGYAHVDFSDSLSLSMALKLD 124
YI NL +D+T+ D+ F +I+SLR T E G RGY +V+F L AL +
Sbjct: 90 YISNLPYDLTDNDVYDFFDGMEIASLRLPTRDDGEPGRLRGYGYVEFVKRQDLIDALSIT 149
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ ++ GR ++I + +G ++R
Sbjct: 150 EPIIHGRRIRIDLSSESDRGRQQRNR 175
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 5 DTGKFRGIAIINFRTEG-AVKRALALDGSEMDGLFLKIQPYKATKAK-------RTSDFT 56
+TG+ +G + F A K + E+DG L + + +AK R + +
Sbjct: 253 ETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLNVD-FSTPRAKPDANGGARANKYG 311
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
K N +++GN+S++ + E ++++F++ I+ + T+++TG +G+ +VDFS
Sbjct: 312 DKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQ 371
Query: 116 SLSMALK-LDQEVVRGRPVKISCAVP 140
+ AL+ L+ + + GR ++I A P
Sbjct: 372 EATAALEALNGQDIGGRAIRIDYATP 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 57 PKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
P EG +++GN+SW+I E+ L++ F +I R T++ETG +G+ +V+FS++
Sbjct: 210 PAAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAA 269
Query: 116 SLSMALK-LDQEVVRGRPVKISCAVP 140
+ A K + + + GR + + + P
Sbjct: 270 DAAKAQKEMHEYELDGRQLNVDFSTP 295
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 234 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 293
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ + RGR +K+ + GI++ R P
Sbjct: 294 ESLFRGRQIKVIPKRTNRPGISTTDRGFP 322
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + ++ +A K A ++ K G R+Y
Sbjct: 152 KGIAYVEFVDVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQKGRAGPMRLY 211
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L +ITE L+ +F ++ S++ + ETG +GY + FSDS AL +L+
Sbjct: 212 VGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG 271
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 272 LELAGRPMKV 281
>gi|375143372|ref|YP_005005813.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361057418|gb|AEV96409.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+ NLS+D+ +EDLK F+ ++SS + T++ETG RG+ V+ +D + A+ +L
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVSSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D V R + +S A P
Sbjct: 63 DGATVENRTISVSVAKP 79
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 204 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPT 263
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++YIG L ITE+ L+++F KI +L T+ +G +GYA+V F +
Sbjct: 264 NTTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDA 322
Query: 118 SMAL-KLDQEVVRGRPVKI 135
A+ +++ + GRP+K+
Sbjct: 323 KRAMEQMNGFELAGRPMKV 341
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--AKRTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + ++ +A K A ++ K G R+Y
Sbjct: 179 KGIAYVEFVDVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQKGRAGPMRLY 238
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L +ITE L+ +F ++ S++ + ETG +GY + FSDS AL +L+
Sbjct: 239 VGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG 298
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 299 LELAGRPMKV 308
>gi|346468341|gb|AEO34015.1| hypothetical protein [Amblyomma maculatum]
Length = 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL + + D+ ++F KI S R +KET +F+GY +V+F D SL AL+ D
Sbjct: 36 FVGNLPDGVVQSDIDEIFHGIKIKSTRLVRDKETDKFKGYCYVEFFDLDSLKEALEFDSA 95
Query: 127 VVRGRPVKISCA 138
++GR +++ A
Sbjct: 96 DLQGRSLRVDIA 107
>gi|326929748|ref|XP_003211018.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Meleagris gallopavo]
Length = 899
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NLS+++T+ + LK+LF C +++ +R +NK G FRGY +V+F D S AL
Sbjct: 642 VFVSNLSYNMTDPEVKLKELFESCGEVAQIRPVFSNK--GTFRGYCYVEFKDEKSALQAL 699
Query: 122 KLDQEVVRGRPVKISCAV 139
LD+ VV GRP+ +S V
Sbjct: 700 GLDRNVVEGRPMFVSPCV 717
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS-----DFTPK 58
DT K +G I+F T EGA K +G+E+DG LK+ A +A+R DF+ +
Sbjct: 394 DTQKSKGFGYIDFETCEGAQKAIETKNGTELDGRTLKVD-LSAPRAERAPAENKRDFSKE 452
Query: 59 IVEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
+ + +++GNL + T++ + ++F++ ++S+R T+ ET +G+ +V+F+
Sbjct: 453 ELSAESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFA 508
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
EG +Y+G LSW++ E LK F C I R T+++T + +G+ ++DF
Sbjct: 355 EGIKNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDF 406
>gi|194214206|ref|XP_001916628.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Equus caballus]
Length = 962
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F G FRG + F+ E + ++AL LD +++G + + P +K F
Sbjct: 740 FSSRGDFRGYCYVEFKEERSAQQALELDRKDVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 799
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 800 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 855
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A LK+D ++ +K++ + PP++ + K P +RA
Sbjct: 856 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEK----PEARRA 893
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITE--EDLKKLFSDC-KISSLRF 94
Q +A KR PK++ ++ +++ NL + + E L+ LF C ++ +R
Sbjct: 682 QKERAAALKRD---MPKVLHDSSKDSITVFVSNLPYSMGEPAAQLRPLFEACGEVVDVR- 737
Query: 95 GTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G+FRGY +V+F + S AL+LD++ V GRP+ +S V K + K
Sbjct: 738 PIFSSRGDFRGYCYVEFKEERSAQQALELDRKDVEGRPMFVSPCVDKSKNPDFK 791
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L + F+ C I+ + +K +G +G+A+V+F +S S+ MAL LD
Sbjct: 139 VYVGNVDYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSVKMALDLD 198
Query: 125 QEVVRGRPVKISC 137
+ + RGR +K++
Sbjct: 199 ESLFRGRQIKVTA 211
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A I F+ E + +AL +G+E+ G +++ +KR+S + +IGNL
Sbjct: 229 AYIVFKDESSASQALKRNGAEVGSGFHIRVD----IASKRSSH------DNKRSAFIGNL 278
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
++I EE ++ FS+C K+ +R +++TG +G+ +V F + ++ +ALKL+ + G
Sbjct: 279 PYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSG 338
Query: 131 RPVKI 135
R +++
Sbjct: 339 RKIRV 343
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I+ + NK TG +GYA+++F+D S+ AL L
Sbjct: 70 IFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLS 129
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKR 157
+ + R +K+ C SK R++P R
Sbjct: 130 ESFFKKRQIKV-C---------SKRRNIPGFNR 152
>gi|344295187|ref|XP_003419295.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Loxodonta africana]
Length = 968
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 744 FSNRGDFRGYCYVEFKDEKSALQALELDRKNVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 803
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 804 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 859
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A +K+D ++ +K++ + PP++ + K +R P ++ + G G +
Sbjct: 860 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGKGRT 916
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E D L+ LF C +++ +R +N+ G+FRGY +V+F D S AL
Sbjct: 711 VFVSNLPYSMGEPDVALRPLFETCGEVAEIRPIFSNR--GDFRGYCYVEFKDEKSALQAL 768
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 769 ELDRKNVEGRPMFVSPCVDKSKNPDFK 795
>gi|254564703|ref|XP_002489462.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|238029258|emb|CAY67181.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|328349891|emb|CCA36291.1| Uncharacterized RNA-binding protein C660.15 [Komagataella pastoris
CBS 7435]
Length = 385
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 1 MTFPDTG-KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------PYKATKAKR 51
+ P G K RG A ++F V ++L ++G L I+ P K +K ++
Sbjct: 137 INLPKKGPKIRGFAYVDFDKPELVPVCISLSEQSLNGRNLLIKDANSFEGRPEK-SKQQQ 195
Query: 52 TSDFTPKIVEGYNRI-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
T + K +RI ++GNLS+D T+EDL++ F C I +R T +++G+ +G+A +
Sbjct: 196 TGGDSGKNKNPPSRILFVGNLSFDTTKEDLEEHFQHCGNIVKIRMATFEDSGKCKGFAFI 255
Query: 110 DFSDSLSLSMAL--KLDQEVVRGRPVKI 135
DF D + AL KL + +V GRP+++
Sbjct: 256 DFLDVEGATNALNDKLCKRMV-GRPLRM 282
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 64 NRIYIGNLSWDITEEDLKKLFS------DCKISS---LRFGTNKETGEFRGYAHVDFSDS 114
N ++IGNL++D T ++L+ D KI+ R K+ + RG+A+VDF
Sbjct: 98 NGVWIGNLTFDTTRDELRSFLIANTEHLDMKITPENITRINLPKKGPKIRGFAYVDFDKP 157
Query: 115 LSLSMALKLDQEVVRGRPVKISCA 138
+ + + L ++ + GR + I A
Sbjct: 158 ELVPVCISLSEQSLNGRNLLIKDA 181
>gi|195344626|ref|XP_002038882.1| GM17146 [Drosophila sechellia]
gi|194134012|gb|EDW55528.1| GM17146 [Drosophila sechellia]
Length = 436
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYK-ATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + + ++ALAL+G+E L++ P A K + D P + I++G+L
Sbjct: 209 AYVVLQNPEIAQQALALNGTEFKENHLRVTPASMAEKFGQGKDQQPSDKDAKRTIFVGSL 268
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+ TEE L+++FS C +I +R + + G +G A+V F ++ +AL+L+Q ++
Sbjct: 269 KYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLLDD 327
Query: 131 RPVKIS 136
RP+ +
Sbjct: 328 RPINVE 333
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTGK RG A K + LDG E G L++ KAK + P E
Sbjct: 153 DTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKES--LYP---ETE 207
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++IGNLSW +T E L + F + + R + ETG RGY V +++ + AL
Sbjct: 208 YKLFIGNLSWKVTSEILTEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAALT 267
Query: 123 LDQEV-VRGRPVKISCA 138
+ +V + GR +++S A
Sbjct: 268 IMNDVELEGRALRVSLA 284
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GNL+++I +E ++ F + + +R +K TG +G+ +V F DS S+ ALK+D
Sbjct: 256 LFVGNLAFNIDDEAVRNHFEEFGTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALKMD 315
Query: 125 QEVVRGRPVKISCAVPPKKGI----NSKSRSLPSNKRATSKVTDSAG 167
+ GRP+++ AV +K +S +RS +++R+ SK +G
Sbjct: 316 GTKLNGRPLRVKRAVKKEKQKQQRDHSNTRSKIAHRRSNSKSRPGSG 362
>gi|398407175|ref|XP_003855053.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
gi|339474937|gb|EGP90029.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
Length = 566
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL +++T D+++ SDC ++++R +K + +G+ +V+F L AL +
Sbjct: 104 HLGNLDYNVTSVDIEEFLSDCSVTTVRIMEDKVDRKPKGFGYVEFGSPEGLRQALTKSES 163
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSL 152
GR +KIS A PPK ++R
Sbjct: 164 SFMGRNIKISVADPPKNDRPEQTRDF 189
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
Query: 66 IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GNLSW++ EE L++ F S ++S +R T +ETG RG+ +V+++D+ S A +
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 125 QEV-VRGRPVKISCAVP-------PKKGINSKSRSL 152
++ + GR + + A P P++ +++RS
Sbjct: 287 KDTELDGRTINLDYAKPRDANSQAPREKAQTRARSF 322
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAK--------- 50
MT +TG+ RG + + + K A A +E+DG + + K A
Sbjct: 257 MTERETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPRDANSQAPREKAQ 316
Query: 51 -RTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFS-DCKISSLRFGTNKETGEFRGYAH 108
R F + N +++GNL + + E ++++F +I +R T+ ETG +GY +
Sbjct: 317 TRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGY 376
Query: 109 VDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVPPKKG 144
V+FS AL +L + GR +++ + P +G
Sbjct: 377 VEFSSVDEARQALNELQGTDIGGRAIRLDFSTPRPQG 413
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 11/94 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I+ + NK TG +GYA+++F+D+ S+ AL L
Sbjct: 73 IFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLS 132
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
+ + R +K+ C SK R++P R
Sbjct: 133 ESFFKKRQIKV-C---------SKRRNIPGFNRP 156
>gi|196016887|ref|XP_002118293.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
gi|190579124|gb|EDV19227.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
Length = 930
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 61 EGYNR---IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
E YN ++I N+ + E+D++ FS C + +R G+F+GY +V+F D L
Sbjct: 675 ERYNEKTSVFISNVPFSAVEDDIRSFFSTCGNVKDVRL-VRAPNGKFKGYGYVEFEDELV 733
Query: 117 LSMALKLDQEVVRGRPVKISCAVPPKK 143
ALKLD+ + GRPV +S V K
Sbjct: 734 TQEALKLDRNTIAGRPVYVSENVDKSK 760
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR- 65
GKF+G + F E + AL LD + + G + + K+K ++F K G +R
Sbjct: 718 GKFKGYGYVEFEDELVTQEALKLDRNTIAGRPVYVSE-NVDKSKHPTEF--KFGSGMDRC 774
Query: 66 -IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
+++ N DI+ + L+++F+ + + +R K +G RG+A+++FS+ S + A+K
Sbjct: 775 TLFVKNTK-DISSDRLREVFNQFEGLRDIRCVARK-SGRSRGFAYIEFSNEASAANAVKT 832
Query: 123 LDQEVVRGRPVKISCAVPPKK 143
LD + G + ++ + P K
Sbjct: 833 LDNTEIDGVTISVAISNPDAK 853
>gi|395513864|ref|XP_003761142.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sarcophilus harrisii]
Length = 1030
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT----PK 58
F + G FRG + F+ E A +AL LD +DG + + P + DF
Sbjct: 807 FSNRGDFRGYCYVEFKEEKAALQALGLDRKTVDGRPMFVSP--CVDKNKNPDFKVFRYST 864
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDS 114
+E + +++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 865 ALEKH-KLFISGLPFSCTKEELEDI---CKVHGSVRDLRLVTNR-AGKPKGLAYVEYENE 919
Query: 115 LSLSMA-LKLDQEVVRGRPVKISCAVPPKK 143
S A LK+D ++ +K++ + PP++
Sbjct: 920 AQASQAVLKMDGMTIKENVIKVAISNPPQR 949
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 48 KAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKE 99
KA PK+ N+ +++ NL + + E + L+ LF C +++ +R +N+
Sbjct: 752 KAAAIKKEMPKVFHDSNKDNITVFVSNLPYSLGEPEVKLRPLFEACGEVTEIRPIFSNR- 810
Query: 100 TGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
G+FRGY +V+F + + AL LD++ V GRP+ +S V K + K
Sbjct: 811 -GDFRGYCYVEFKEEKAALQALGLDRKTVDGRPMFVSPCVDKNKNPDFK 858
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 5 DTGKFRGIAIINF-RTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTG+ RG A + E LDG+E G LK+ A K K + P E
Sbjct: 121 DTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVN--FADKPKPNKE--PLYPETE 176
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++++GNLSW +T E L F +C + R + +TG RGY V +S + AL+
Sbjct: 177 HKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALE 236
Query: 123 -LDQEVVRGRPVKISCA 138
LD + GR ++++ A
Sbjct: 237 SLDGFELEGRAIRVNLA 253
>gi|448520521|ref|XP_003868297.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis Co 90-125]
gi|380352637|emb|CCG25393.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis]
Length = 327
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 1 MTFPDTG-KFRGIAIINFRTEGAVKRALALDGSEMDG--LFLKIQPYKATKAKRTSDFTP 57
+ P G + +G A ++ + E V++ +AL ++G L +K + ++ S P
Sbjct: 115 VNLPKKGNQIKGFAYVDVKNEEQVEKLIALSEQNLNGRNLLIKSATSFEGRPEKESKLPP 174
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
+ +++GNLS+D TE++L++ F C I +R T ++TG+ +G+A +DF
Sbjct: 175 SRI-----LFVGNLSFDTTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFAFIDF 224
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 66 IYIGNLSWDITEEDLKK-LFSDCKISS---LRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++IGNLS+D T EDL + L + IS R K+ + +G+A+VD + + +
Sbjct: 83 VWIGNLSFDTTMEDLMRFLVAKSTISKEDITRVNLPKKGNQIKGFAYVDVKNEEQVEKLI 142
Query: 122 KLDQEVVRGRPVKISCA 138
L ++ + GR + I A
Sbjct: 143 ALSEQNLNGRNLLIKSA 159
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNLS+++T++ LK +F D K++ + F T++ETG RG+A V+ S A+ L
Sbjct: 3 IYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAITAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRVLKVNKAKP 79
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNR--IYIG 69
A + F+ E + +AL +G+E+ G +++ D K N+ ++G
Sbjct: 231 AYVVFKDESSASKALMRNGAEVGSGFHIRV------------DMASKSSSHDNKRSAFVG 278
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL +DI EE ++K FS C + +R +++TG +G+ +V F + ++ +ALKL+ +
Sbjct: 279 NLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQL 338
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 339 SGRRIRVKRSV 349
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPK-----IV 60
TG+ +G+A + FR E +V+ AL L G + G+ + +Q +A K ++ + + +
Sbjct: 254 TGRSKGVAYVEFRREDSVQVALTLSGKRILGIPVIVQLTEAEKNRKARELSEQNRALSAE 313
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
++R+ +GN+ ++IT+EDLK +F ++ +R + + +G+ + F D L +
Sbjct: 314 LPFHRLCVGNIHFNITDEDLKAIFEPFGELEYVRLQRDDQNRS-KGFGFIQFRDPLCARI 372
Query: 120 ALK 122
AL+
Sbjct: 373 ALE 375
>gi|320586970|gb|EFW99633.1| nucleic acid-binding protein [Grosmannia clavigera kw1407]
Length = 314
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 7 GKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
G RG A + F T A+ +AL DGS G + +Q A + +
Sbjct: 156 GLSRGFAFVWFNTAEAMAKALKEADGSFWHGRRIIVQERTARREAGSPSAATSTRSPTTS 215
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+Y+GNL ++ T+ DL +LF + + S+R ++ TG RG+AH DF + A + L
Sbjct: 216 LYVGNLPYETTDADLNQLFVGLEGVKSVRVAVDRSTGWPRGFAHTDFETVDQATKAFEHL 275
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKS 149
V R ++I A P + ++S
Sbjct: 276 AGRTVGTRQLRIDYANPSRDQRQTRS 301
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A I F+ E + +AL +G+E+ G +++ +KR+S + +IGNL
Sbjct: 229 AYIVFKDESSASQALKRNGAEVGSGFHIRVD----IASKRSSH------DNKRSAFIGNL 278
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
++I EE ++ FS+C K+ +R +++TG +G+ +V F + ++ +ALKL+ + G
Sbjct: 279 PYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSELSG 338
Query: 131 RPVKI 135
R +++
Sbjct: 339 RKIRV 343
>gi|156379950|ref|XP_001631718.1| predicted protein [Nematostella vectensis]
gi|156218763|gb|EDO39655.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 46/72 (63%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL + + DL ++F+D +I ++R +KET F+G+ +V+F D SL+ AL+ +
Sbjct: 18 FVGNLPINTVQGDLDQIFADLRIRNVRLVRDKETDRFKGFCYVEFEDPESLTAALEFNGA 77
Query: 127 VVRGRPVKISCA 138
+V R +++ A
Sbjct: 78 LVNDRQIRVDIA 89
>gi|452846802|gb|EME48734.1| hypothetical protein DOTSEDRAFT_67685 [Dothistroma septosporum
NZE10]
Length = 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPY--KATKAKRTSDFTPKIVEGYNRIY 67
+G I F + ALALD G + +Q + + R DF ++
Sbjct: 243 KGFGYIEFTRQEDADNALALDQKVFQGRRMAVQYHVRRDNTQPRRQDFRTSTNAPSKTLF 302
Query: 68 IGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-LDQ 125
IGN+S+ +++ DL LF + + + +R ++ +G+ RG+AH DF D S A + L++
Sbjct: 303 IGNMSYQMSDRDLNDLFREIRNVLDVRVAIDRRSGQPRGFAHADFIDIESAQKAKEHLEK 362
Query: 126 EVVRGRPVKI 135
+ V R ++I
Sbjct: 363 KTVYDRRLRI 372
>gi|378726631|gb|EHY53090.1| translation initiation factor eIF-4B [Exophiala dermatitidis
NIH/UT8656]
Length = 540
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++ NLS+D T+ D+ FS C+++++R +K + +G+ +V+F+ L AL L
Sbjct: 75 HLANLSFDATQADINDFFSQCQVTNVRIVEDKLDRKPKGFGYVEFATLDGLKAALALSGN 134
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS-------LPSNKRATSKVTDSAGLGTSNDADNSGA 179
+ GR V++S A PPK+ +++ S LP + +V+D G DN
Sbjct: 135 NLAGRQVRVSVAEPPKERQDTRDFSDWSRKGPLPDLPGSQRRVSDRQGGFGGRSFDNMSD 194
Query: 180 VTSNVAANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLS 223
S+ A G D GK+R + +E KG LS
Sbjct: 195 AGSDRGARRGFDQGD-----------GKVRDFSNWE--RKGPLS 225
>gi|328773147|gb|EGF83184.1| hypothetical protein BATDEDRAFT_21654 [Batrachochytrium
dendrobatidis JAM81]
Length = 427
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+ +GNLS+D++E D+ F D +I S+R E G+ RG+ +V+ D S+ ALK+
Sbjct: 66 VNMGNLSYDVSERDISMFFGDEIRIKSIRLPMG-ENGQSRGFGYVELEDHQSIVAALKMS 124
Query: 125 QEVVRGRPVKI--------SCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADN 176
E RPV+I S A+ +K N+ S+ RA V+ S G +N
Sbjct: 125 GEQFMNRPVRIRVVEDGKRSTAIEEEKFGNNWRTSM----RAAEPVSQSYGFSGDRGRNN 180
Query: 177 SG 178
G
Sbjct: 181 DG 182
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T ++L+ F+ C ++ + N+ TG +G+A+++FSD S+ A+ LD
Sbjct: 39 IYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRESVRTAMALD 98
Query: 125 QEVVRGRPVKISCAVPPKK 143
+ + RGR +K+S PK+
Sbjct: 99 ETLFRGRVIKVS----PKR 113
>gi|226291029|gb|EEH46457.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGNLS+++++ +L +LF D K ++ +R ++ TG+ RG+AH DF D S A + L
Sbjct: 177 LFIGNLSFEMSDRELNELFKDIKNVTDVRVSVDRRTGQPRGFAHADFLDVESAQAAFEIL 236
Query: 124 DQEVVRGRPVKI 135
+ GRP+++
Sbjct: 237 KDKAPYGRPLRL 248
>gi|375146726|ref|YP_005009167.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060772|gb|AEV99763.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+ NLS+D+ +EDLK F+ +++S + T++ETG RG+ V+ SD + A+ +L
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMSDEAASKKAIAEL 62
Query: 124 DQEVVRGRPVKISCAVP----PKKG 144
D V R + +S A P P +G
Sbjct: 63 DGATVENRTISVSVAKPKEDRPSRG 87
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+L++ F C ++ + +K +G +G+A+++FSD S+ A+ LD
Sbjct: 13 VYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVKTAMALD 72
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ RGR +K+S + G++S
Sbjct: 73 DSLFRGRQIKVSPKRTNRPGVSS 95
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTGK RG A + E LDG E G L++ K K P E
Sbjct: 149 DTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKE-----PLYPETE 203
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNL+W +T E + F + + R + ETG+FRGY V ++ + AL
Sbjct: 204 YKLFVGNLAWTVTFESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTALA 263
Query: 123 -LDQEVVRGRPVKISCA 138
+D + GR +++S A
Sbjct: 264 IMDNVELEGRTLRVSLA 280
>gi|157820585|ref|NP_001100626.1| squamous cell carcinoma antigen recognized by T-cells 3 [Rattus
norvegicus]
gi|149063643|gb|EDM13966.1| squamous cell carcinoma antigen recognized by T-cells 3 (predicted)
[Rattus norvegicus]
Length = 960
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + ++AL LD ++G + + P +K F
Sbjct: 737 FSNRGDFRGYCYVEFKEEKSAQQALDLDRKNVEGRPMFVSPCVDKSKNPDFKMFRYSTTL 796
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 797 EKHKLFISGLPFSCTKEELEGI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 852
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS--RSLPSNKRATSKVTDSAGLGTS 171
S A LK+D ++ +K++ + PP++ + K R+ P ++ + G G +
Sbjct: 853 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGKGRT 909
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + I E + L+ LF C ++ +R
Sbjct: 679 QKEKAASLKRD---MPKVAHDSSKDSVTVFVSNLPYSIEEPEVKLRPLFEACGEVVQIRP 735
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+N+ G+FRGY +V+F + S AL LD++ V GRP+ +S V K + K
Sbjct: 736 IFSNR--GDFRGYCYVEFKEEKSAQQALDLDRKNVEGRPMFVSPCVDKSKNPDFK 788
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
F + G FRG + FR E A ++ALALD + ++G + + P + DF V
Sbjct: 703 VFNNKGTFRGYCYVQFREEEAARQALALDRTAVEGRPMFVSP--CVDKNKNPDFK---VF 757
Query: 62 GY------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF 111
Y ++++I L + T+E+L+++ CK + +R TN+ G+ +G A+V++
Sbjct: 758 RYSTTLEKHKLFISGLPFSCTKEELEEV---CKAHGNVKDIRLVTNR-AGKPKGLAYVEY 813
Query: 112 SDSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSR----SLPSNKRATSKVTDSA 166
S A LK+D ++ +K+ + PP + + + SLP A ++ +
Sbjct: 814 ESEAQASQAVLKMDGLTMKDHVIKVMISNPPLRKLPDRPEPGRASLPM---APRQIYGAR 870
Query: 167 GLGTSNDADNSGAV--TSNVAANAGSG 191
G G + + A+ SN A A +G
Sbjct: 871 GKGRTQLSMMPRALQRQSNPVAKAENG 897
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+++ NLS+ + E + L++LF C ++ +R N + G FRGY +V F + + AL
Sbjct: 671 VFVSNLSYTMAEPEAKLRELFGSCGEVVEIRAVFNNK-GTFRGYCYVQFREEEAARQALA 729
Query: 123 LDQEVVRGRPVKISCAV 139
LD+ V GRP+ +S V
Sbjct: 730 LDRTAVEGRPMFVSPCV 746
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
T + RG ++F + ++A+ + G E+DG + + +P K R F
Sbjct: 248 TERSRGYGYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVP 307
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+ + +++GNLS++ +++ +LF D I S+R T+ ET + +G+ +V ++
Sbjct: 308 SQPSDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQ 367
Query: 119 MAL-KLDQEVVRGRPVKISCAVP 140
AL KL E + RPV++ + P
Sbjct: 368 KALDKLQGEYIDNRPVRLDFSSP 390
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW I +E LK F + S R + T RGY +VDF D A+K
Sbjct: 213 IFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAIKEM 272
Query: 125 Q-EVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
Q + + GRP+ + + SK S P RA
Sbjct: 273 QGKEIDGRPINVDMST-------SKPASNPKEDRA 300
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNR--IYIG 69
A + F+ E + +AL +G+E+ G +++ D K N+ ++G
Sbjct: 231 AYVVFKDESSASKALMRNGAEVGSGFHIRV------------DMASKSSSHDNKRSAFVG 278
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL +DI EE ++K FS C + +R +++TG +G+ +V F + ++ +ALKL+ +
Sbjct: 279 NLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQL 338
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 339 SGRRIRVKRSV 349
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G ++ NLS++I D++ F + ++ +RF TN++ G FRG+ HV+F+ S A
Sbjct: 295 GSKTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKA 354
Query: 121 LKLDQEVVRGRPVKISCA 138
L+ + GR +++ A
Sbjct: 355 LEFHGRPLLGREIRLDIA 372
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDG--LFLKIQPYKATKAKRTSDFTPK---I 59
D G FRG + F + ++AL G + G + L I + + +R + FTP+
Sbjct: 333 DDGSFRGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQERGERGERPA-FTPQSGNF 391
Query: 60 VEG-----YNRIYIGNLSWDITEEDLK----KLFSDC-KISSLRFGTNKETGEFRGYAHV 109
G +I++ ++E+D+K + FS C +I ++ +++TG +G A++
Sbjct: 392 RSGGDGGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYL 451
Query: 110 DFSDSLSLSMAL 121
+FS+ ++ L
Sbjct: 452 EFSEGKEKALEL 463
>gi|340518400|gb|EGR48641.1| predicted protein [Trichoderma reesei QM6a]
Length = 572
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F+ C + S+R ++E +G+ +V+F + L AL LD +
Sbjct: 82 HLGNLSYDATTESVTDFFTGCDVVSVRIIEDREMQRPKGFGYVEFGNLEGLKKALTLDGQ 141
Query: 127 VVRGRPVKISCAVPP 141
GR ++I A PP
Sbjct: 142 SFEGRMIRIKVADPP 156
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE-GYN 64
TG+ +G+A + F AV +AL + G ++ G+ + +Q +A + + K V+ +
Sbjct: 77 TGRSKGVAYVEFYEVEAVSKALEMTGQKLLGIPIIVQLTEAERNRVALQAASKTVDTAAS 136
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSM-AL 121
RIY+G+L + +TE+D+ F I + +KETG +GYA V + D+ L++ L
Sbjct: 137 RIYVGSLDYSLTEQDVANAFQGFGPIEFINIHMDKETGHSKGYAFVQYVKDAWFLNIFIL 196
Query: 122 KLDQEV 127
KL V
Sbjct: 197 KLQIRV 202
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT------SDFTPKI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ S+ +
Sbjct: 236 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQS 295
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++R+Y+GN+ + ITE DL+ +F +E G +GY V F D
Sbjct: 296 IP-FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQARE 354
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 355 ALEKMNGFDLAGRPIRV 371
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S++++++DL LF D + + +R ++ TG+ RG+AH DF D S + A + L
Sbjct: 235 LFIGNMSFEMSDKDLNDLFRDIRNVLDVRVAIDRRTGQPRGFAHADFIDVASATRAREVL 294
Query: 124 DQEVVRGRPVKI 135
++V+ GR +++
Sbjct: 295 KEKVIYGRQLRV 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 46 ATKAKRTS-----DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKE 99
ATK +TS + T K +E +N +YIGNL +++T + LK++FS I S++ +
Sbjct: 113 ATKPSQTSPRGKRERTSKNIEPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESIKIVYDNR 172
Query: 100 TGEFRGYAHVDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVP---PKKG 144
G RG+A+V++ + A+ LD +V GR + + P P KG
Sbjct: 173 -GLSRGFAYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQFHAPKYQPAKG 220
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I+ + NK TG +GYA+++F+D+ S+ AL L
Sbjct: 31 IFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVRTALSLS 90
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKR 157
+ + R +K+ C SK R++P R
Sbjct: 91 ESFFKKRQIKV-C---------SKRRNIPGFNR 113
>gi|423076693|ref|ZP_17065401.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
gi|361852256|gb|EHL04522.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
Length = 112
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNL W+ T EDL F ++ S R T++ETG RG+ V+ D + MA L+
Sbjct: 33 LYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDAARMAEDLN 92
Query: 125 QEVVRGRPVKISCAVPPKK 143
+ GRP+ ++ A P ++
Sbjct: 93 GKDFGGRPLTVNEARPKQQ 111
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ NL +++TE+ ++K+FS+C + +R TN + +F+GY +V+F D S ALK D
Sbjct: 620 VFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQK-KFKGYCYVEFEDEESAKKALKKD 678
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKV 162
+E + RP+ + + + G ++ + L NK +K+
Sbjct: 679 RETINDRPMYVDPS-KDRSGAPAEKKFLYENKMEKNKL 715
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYK---ATKAKRTSDFTPKIVEGYN 64
KF+G + F E + K+AL D ++ + + P K A++ + K+ + N
Sbjct: 656 KFKGYCYVEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFLYENKMEK--N 713
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
++++ L +T E+L+K FS K+ +R T K +G +G A+VDF + S + A+
Sbjct: 714 KLFVSGLPRTLTTEELEKTFSKFGKLKGVRIVTFK-SGVPKGLAYVDFENEASATRAVMG 772
Query: 123 LDQEVVRGRPVKISCAVPP 141
LD + + ++ + PP
Sbjct: 773 LDNTQIGEHTITVAISNPP 791
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--------AKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A K A
Sbjct: 261 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 320
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 321 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 380
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 381 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 440
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + + S++AA A
Sbjct: 441 SGTASSTGLTTAASFNGGVSTISSLAAPA 469
>gi|296420222|ref|XP_002839674.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635868|emb|CAZ83865.1| unnamed protein product [Tuber melanosporum]
Length = 493
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D+TE + + FS C++ ++R ++ +G+ +V+F L A+ + E
Sbjct: 71 HVGNLSFDVTEAQMSEFFSSCQVENVRLVRDRMDDRPKGFGYVEFKTKEGLIAAVNMSGE 130
Query: 127 VVRGRPVKISCAVPPK 142
V GR VK+S A P K
Sbjct: 131 VFCGRGVKVSVAEPQK 146
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T +DL+ FS C I+ + +K +G +GYA+++F++ S+ A+ +D
Sbjct: 39 VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMD 98
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ V RGR +K+ GI+S R
Sbjct: 99 ETVFRGRTIKVLPKRTNMPGISSTDR 124
>gi|449297551|gb|EMC93569.1| hypothetical protein BAUCODRAFT_37252 [Baudoinia compniacensis UAMH
10762]
Length = 404
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S+ +++ DL LF + K + +R ++ +G+ RG+AH DF D S A + L
Sbjct: 318 LFIGNMSYQMSDRDLNDLFREIKNVLDVRVAIDRRSGQPRGFAHADFIDVQSAERAKEHL 377
Query: 124 DQEVVRGRPVKI 135
+++V+ GR +KI
Sbjct: 378 EKKVIYGRQLKI 389
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNLS+D+T+EDL K+F+D ++ ++ ++E+G RG+ V+ + A+ +L
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPS-NKRATSK 161
D GR +K++ A P ++G + S S S N+R +S+
Sbjct: 63 DGARWMGRVLKVNKAKPREEGGSRTSNSRGSYNRRESSR 101
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E++++ F C I+ + +K TG +GYA+V+FS++ + AL +D
Sbjct: 79 IYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFSETEHVDAALSMD 138
Query: 125 QEVVRGRPVKISC 137
+ RGR +K++
Sbjct: 139 NSLFRGRLIKVTA 151
>gi|342879218|gb|EGU80475.1| hypothetical protein FOXB_09032 [Fusarium oxysporum Fo5176]
Length = 554
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D+T + + + +DC + ++R ++E +G+ +V+F L AL D E
Sbjct: 83 HLGNLSYDVTNDAVGEYLADCGVVNVRLIEDRELQRPKGFGYVEFETLDGLKKALTFDGE 142
Query: 127 VVRGRPVKISCAVPPKKG 144
GR +KI A PP+ G
Sbjct: 143 NFNGRMIKIKVADPPRGG 160
>gi|148238002|ref|NP_001087148.1| eukaryotic translation initiation factor 4H [Xenopus laevis]
gi|50604028|gb|AAH78074.1| Wbscr1-prov protein [Xenopus laevis]
Length = 250
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDNIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 104
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 105 IFIDRAIRVDIA 116
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKI-SSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GN+ + E+L+ LFS+C I + + NK TG +GYA+++F+D S+ AL L
Sbjct: 68 IFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLS 127
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKR 157
+ + R +K+ C SK R++P R
Sbjct: 128 ESFFKKRQIKV-C---------SKRRNIPGFNR 150
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
+GK RG ++F T A K+A G E+DG ++I P R F +
Sbjct: 250 SGKSRGFGYVDFATAAAAKKAFDEGQGKEVDGRAIRIDLSTPKGDVTENRAKKFNDQRSA 309
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ ++IGNLS+D++E+D+ FS+ ++S +R + ++G +G+ +V+F+ S A
Sbjct: 310 PSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 369
Query: 121 LK-LDQEVVRGRPVKISCAVP 140
+ + + + GRP+++ + P
Sbjct: 370 IDAMTGQELAGRPLRLDFSTP 390
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 64 NRIYIGNLSWDITEEDLK---KLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
N+I++G LSW++ + LK ++F + ++S R ++ +G+ RG+ +VDF+ + + A
Sbjct: 213 NQIWVGQLSWNVDNDWLKSEMEVFGE--VTSARVQLDRTSGKSRGFGYVDFATAAAAKKA 270
Query: 121 LKLDQ-EVVRGRPVKISCAVP 140
Q + V GR ++I + P
Sbjct: 271 FDEGQGKEVDGRAIRIDLSTP 291
>gi|391345376|ref|XP_003746965.1| PREDICTED: uncharacterized protein LOC100908041 [Metaseiulus
occidentalis]
Length = 420
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL ++I+E+++ F + ++SS+RF + FRG+ + +F D +L AL LD +
Sbjct: 79 FLGNLPFEISEDEVAGFFGELRLSSVRF-VRDSSERFRGFGYAEFQDRAALIDALGLDGD 137
Query: 127 VVRGRPVKISC 137
++R R +++S
Sbjct: 138 ILRNREIRVSL 148
>gi|344255872|gb|EGW11976.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Cricetulus
griseus]
Length = 803
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + ++AL LD ++G + + P + DF V
Sbjct: 579 VFSNRGDFRGYCYVEFKEEKSAQQALELDRKNVEGRPMFVSP--CVDKSKNPDFK---VF 633
Query: 62 GY------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF 111
Y ++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++
Sbjct: 634 RYSTTLEKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEY 689
Query: 112 SDSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS--RSLPSNKRATSKVTDSAGL 168
+ S A +K+D ++ +K++ + PP++ + K R+ P ++ + G
Sbjct: 690 ENESQASQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGK 749
Query: 169 GTSNDADNSGAVTSNVAA 186
G + A A+ + AA
Sbjct: 750 GRTQLALLPRALQRHSAA 767
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E + L+ LF C ++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 547 VFVSNLPYSMDEPEAKLRPLFEACGEVVQIRPVFSNR--GDFRGYCYVEFKEEKSAQQAL 604
Query: 122 KLDQEVVRGRPVKISCAV 139
+LD++ V GRP+ +S V
Sbjct: 605 ELDRKNVEGRPMFVSPCV 622
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI 59
+T D+ + RG ++F + A ++A +G+ + G +++ A+K +D T +
Sbjct: 337 VTDKDSRRSRGFGYVDFTSPDAAEKAYNEKNGAHLQGREMRLD--FASKPAEGNDPTTRA 394
Query: 60 VEGYNR-----------IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYA 107
E + +++GNLS++ TEE + + F S + SLR T++E+G +G+A
Sbjct: 395 AERARKHGDVISPESDTLFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFA 454
Query: 108 HVDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVP 140
+V F+ A +L+ + GRPV++ A P
Sbjct: 455 YVTFNSVEDAKTAFNQLNGSNLDGRPVRLDFAKP 488
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
+++GNL W + ++ L + F +C+ I S R T+K++ RG+ +VDF+ + A +
Sbjct: 307 LWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNEK 366
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRS 151
+ ++GR +++ A P +G + +R+
Sbjct: 367 NGAHLQGREMRLDFASKPAEGNDPTTRA 394
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
TGK RG ++F + ++ALA + G E+DG + + +P+ + R F
Sbjct: 252 TGKSRGYGYVDFEGKSFAEKALAEMQGKEIDGRPINLDMSTGKPHASKSNDRAKQFGDSQ 311
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+ ++IGNLS++ + L F + + S R T+ +T + +G+ +V FS
Sbjct: 312 SPPSDTLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAK 371
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
AL+ L+ + + GRP ++ + P
Sbjct: 372 AALEALNGQYIEGRPCRLDFSAP 394
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 48 KAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGY 106
KAK +D P +++G LSW+I ++ LK+ F + R + TG+ RGY
Sbjct: 205 KAKAATDEEPAT------LFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGY 258
Query: 107 AHVDFSDSLSLSMAL-KLDQEVVRGRPVKISCA 138
+VDF AL ++ + + GRP+ + +
Sbjct: 259 GYVDFEGKSFAEKALAEMQGKEIDGRPINLDMS 291
>gi|291411787|ref|XP_002722167.1| PREDICTED: squamous cell carcinoma antigen recognized by T cells 3
[Oryctolagus cuniculus]
Length = 963
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALELDRKSVEGRPMFVSPCVDKSKNPNFKVFRYSTAL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A +K+D +R +K++ + PP++ K +R P ++ + G G +
Sbjct: 855 SQAVMKMDGMTIRENVIKVAISNPPQRKAPEKPEARKAPGGPLVPRQIYGARGKGRT 911
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 22/148 (14%)
Query: 18 RTEGAVKRALAL-DGSEMDGLFLK--------IQPYKATKAKRTSDFTPKIVEGYNR--- 65
R E +V A A+ DG++ G+ K Q KA KR PK+ ++
Sbjct: 648 RVENSVPAAGAVHDGAQESGVTGKPIDVDRPSKQKEKAASLKRD---VPKVPHDSSKDSV 704
Query: 66 -IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++ NL + + E D L+ LF C ++ +R +N+ G+FRGY +V+F + S A
Sbjct: 705 TVFVSNLPYSMEEPDEKLRPLFEACGEVVEIRPIFSNR--GDFRGYCYVEFKEEKSALQA 762
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSK 148
L+LD++ V GRP+ +S V K N K
Sbjct: 763 LELDRKSVEGRPMFVSPCVDKSKNPNFK 790
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--------AKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A K A
Sbjct: 223 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 282
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 283 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 342
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 343 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 402
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + + S++AA A
Sbjct: 403 SGTASSTGLTTAASFNGGVSTISSLAAPA 431
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ ++ TE D+ + FS K+ +R ++ + RG +V+F D++S+ MA+ L
Sbjct: 184 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 243
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + G+PV + + K + S
Sbjct: 244 GQPLLGQPVMVKPSEAEKNLVQS 266
>gi|326478575|gb|EGE02585.1| RNA binding protein Rnp24 [Trichophyton equinum CBS 127.97]
Length = 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 30/142 (21%)
Query: 3 FPDTGKFR-------GIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDF 55
PD+G R G A ++F ++ V+RA+AL + G + I K ++F
Sbjct: 127 IPDSGTKRKGVKQNKGFAYVDFTSQEIVERAIALSEELVGGRRVLI--------KDATNF 178
Query: 56 TPKIVEGYNR--------------IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKET 100
++V+ +R I++GNLS+D T+E L++ FS C IS++ T +++
Sbjct: 179 EGRVVKEADRDDLKTAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCGSISNIHVATFEDS 238
Query: 101 GEFRGYAHVDFSDSLSLSMALK 122
G+ +GYA V+F + S A++
Sbjct: 239 GKCKGYAWVEFESTESSQAAVR 260
>gi|239607722|gb|EEQ84709.1| nucleic acid-binding protein [Ajellomyces dermatitidis ER-3]
Length = 153
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGNLS+++T+ +L ++F D + +R +K TG RG+AH DF D S ++ L
Sbjct: 32 LFIGNLSFEMTDRELNEMFKDIPNVKDVRVSVDKRTGRPRGFAHADFLDVESAQAGMELL 91
Query: 124 DQEVVRGRPVKISCAV 139
+ GRP++I ++
Sbjct: 92 KDKAPYGRPLRIDFSL 107
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 740 FSNRGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 799
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF-SDSLS 116
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ S+S +
Sbjct: 800 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYESESQA 855
Query: 117 LSMALKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
LK+D V+ +K++ + PP++ + K +R P ++ + G G +
Sbjct: 856 SQAVLKMDGMTVKENVIKVAISNPPQRKVPEKPEARRAPGGALVPRQIYGARGKGRT 912
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + ++E D L+ LF C +++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 707 VFVSNLPYSMSEPDVQLRPLFEACGEVAEIRPIFSNR--GDFRGYCYVEFKEEKSALQAL 764
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 765 ELDRKNVEGRPMFVSPCVDKSKNPDFK 791
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-K 122
++Y+GNLS+D TEED++++F +SS+ T+++TG +G+A V+ + A+ +
Sbjct: 2 KLYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISE 61
Query: 123 LDQEVVRGRPVKISCAVP 140
L+ V+GR +K+S A P
Sbjct: 62 LNDVDVKGRSIKVSVARP 79
>gi|324503789|gb|ADY41640.1| Squamous cell carcinoma antigen recognized by T-cell 3 [Ascaris
suum]
Length = 851
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDF-TPKIVEGYNRIYI 68
+G ++F T + AL+ D +DG + + K + + ++F P +E N++++
Sbjct: 659 KGFGYVDFETVEEAQEALSKDRHLIDGRPMYVSENKPHEKGQRNEFRYPTTLEK-NKLFV 717
Query: 69 GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEV 127
N+ +D T E +K++F+ I +R T+K +G+ +G A+V+F + + S ALK + V
Sbjct: 718 NNVHYDATSEQVKEVFAVFGAIRDVRIVTHK-SGKSKGCAYVEFEEESAASAALKAEDIV 776
Query: 128 VRGRPVKISCAVPPKK 143
+ R + ++ + PPKK
Sbjct: 777 LLERKLSVAYSNPPKK 792
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++I NL + + +E + ++F + K +RF + +G+ +VDF AL D+
Sbjct: 623 VFISNLDFKLPKEKIMQIFPNAK--EVRFIQRGMSKLHKGFGYVDFETVEEAQEALSKDR 680
Query: 126 EVVRGRPVKISCAVPPKKGINSKSR---SLPSNK 156
++ GRP+ +S P +KG ++ R +L NK
Sbjct: 681 HLIDGRPMYVSENKPHEKGQRNEFRYPTTLEKNK 714
>gi|297735838|emb|CBI18558.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ 42
+TFP++GK RGIAII+ +TE A KRAL LDG++ LF +IQ
Sbjct: 369 VTFPESGKIRGIAIISLKTEAAAKRALVLDGADRGELFQEIQ 410
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
IY+GNLS+ +TEEDLK+ F++ +S ++ T++ETG RG+A V+ SD+ + L
Sbjct: 3 IYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G + G+ + Q +A K ++ + P+ G
Sbjct: 203 SGRSKGVGYVEFKNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARN--PEATAGNQH 260
Query: 63 ---YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSL 117
++R+Y+GN+ + ITE+DL +F L F ETG +GYA V F++
Sbjct: 261 TAPFHRLYVGNVHFSITEDDLTNVFE--PFGELEFVQLQKDETGRSKGYAFVQFANPEQA 318
Query: 118 SMAL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 319 RDALEKMNGFELAGRAIRV 337
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEG 62
T + +GI+ + F+ +V A+ L ++ G+ + +Q +A K + TS T + G
Sbjct: 200 TRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNPTSILTKGNI-G 258
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
R+Y+G+L ++ITEE L+ +F KI ++ + ET +GY + F DS AL
Sbjct: 259 PMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKAL 318
Query: 122 -KLDQEVVRGRPVKI 135
+L+ + GRP+K+
Sbjct: 319 EQLNGFELAGRPMKV 333
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + +K TG +GYA+V+F+D ++ A+ L+
Sbjct: 98 IYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLN 157
Query: 125 QEVVRGRPVKISC 137
+ + RGR +KI+
Sbjct: 158 ESLFRGRLIKITA 170
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S++++++DL LF + + + +R ++ TG+ RG+AH DF D S + A L
Sbjct: 289 LFIGNMSFEMSDKDLNDLFREVRNVVDVRVAIDRRTGQPRGFAHADFLDIASATHAKNIL 348
Query: 124 DQEVVRGRPVKISCAVP 140
+VV GR ++I + P
Sbjct: 349 ANKVVYGRELRIDFSHP 365
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 35 DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRF 94
D LF + + TSD P +YIGNL +++T + L+++FS RF
Sbjct: 168 DALFTAETTLRTRPRRDTSDAPPG-----RTLYIGNLYYEVTADQLQRVFS-------RF 215
Query: 95 GTNKET-------GEFRGYAHVDFSDSLSLSMAL-KLDQEVVRGR 131
G + G RG+ +V+F + A+ LD +V GR
Sbjct: 216 GEIENVKIIYDNRGLSRGFGYVEFKNIPDAQTAIDNLDMQVFEGR 260
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
gi|297337305|gb|EFH67722.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G ++ NLS++I D++ F + ++ +RF TN++ G FRG+ HV+F+ S A
Sbjct: 292 GSKTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKA 351
Query: 121 LKLDQEVVRGRPVKISCA 138
L+ + GR +++ A
Sbjct: 352 LEFHGRPLLGREIRLDIA 369
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDG--LFLKIQPYKATKAKRTSDFTPKIVE- 61
D G FRG + F + ++AL G + G + L I + + +R + +TP+
Sbjct: 330 DDGSFRGFGHVEFASSEEAQKALEFHGRPLLGREIRLDIAQERGERGERPA-YTPQSGNY 388
Query: 62 -------GYNRIYIGNLSWDITEEDLK----KLFSDC-KISSLRFGTNKETGEFRGYAHV 109
++++ ++E+D++ + FS C +I S+ +++TG +G A+V
Sbjct: 389 KSGGDGGDEKKVFVKGFDSSLSEDDIRNALTEHFSSCGEIKSVSVPMDRDTGNSKGIAYV 448
Query: 110 DFSDSLSLSMAL 121
FS+ ++ L
Sbjct: 449 AFSEGKEKALEL 460
>gi|367015182|ref|XP_003682090.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
gi|359749752|emb|CCE92879.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
Length = 388
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNRI-Y 67
+G ++F T ++ A++L S ++G L I+ K+ + +D +RI +
Sbjct: 165 KGFCYMDFETTEQMEAAISLSESHLNGRNLLIKNSKSFDGRPDKNDLVSLSKNPPSRILF 224
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
+GNLS+D T+E LKK F C +I +R T +++G+ +G+A VDF D + ALK
Sbjct: 225 VGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFKDEEGATNALK 280
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-------TSDFTPK 58
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ +S+
Sbjct: 233 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSSNNQQS 292
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
I ++R+Y+GN+ + ITE DL+ +F +E G +GY V F D
Sbjct: 293 IP--FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAR 350
Query: 119 MAL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 351 EALEKMNGFDLAGRPIRV 368
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
VEG +I++G L+W TE+ LK F ++ + NK TGE RG+ V F +S S
Sbjct: 59 VEG--KIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSAD 116
Query: 119 MALKLDQEVVRGRPVKISCAVP 140
ALK ++ V+ GR + + AVP
Sbjct: 117 AALK-EEHVIDGRTIDVKRAVP 137
>gi|297737935|emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 56 TPKIVE-GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSD 113
TP++ G +++GNLS+ + +ED++ F D ++ +RF ++ + G F+G+ HV+F+
Sbjct: 439 TPQVESTGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDAD-GRFKGFGHVEFAT 497
Query: 114 SLSLSMALKLDQEVVRGRPVKISCA 138
+ ALK++ + + GR V++ A
Sbjct: 498 PEAAQKALKMNGKDLLGRAVRLDLA 522
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ---------PYKATKA----KRTS 53
G+F+G + F T A ++AL ++G ++ G +++ PY ++ K S
Sbjct: 485 GRFKGFGHVEFATPEAAQKALKMNGKDLLGRAVRLDLARERGAYTPYSGKESNSFQKGGS 544
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
V G+++ + D L++ F C IS + + E+G +G A++DF+
Sbjct: 545 QAQTIFVRGFDK----SGDEDQVRSTLEEYFGSCGDISRISIPKDYESGSVKGIAYMDFT 600
Query: 113 DSLSLSMALKLD 124
D S + AL+L+
Sbjct: 601 DGDSFNKALELN 612
>gi|354490464|ref|XP_003507377.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3,
partial [Cricetulus griseus]
Length = 814
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + ++AL LD ++G + + P + DF V
Sbjct: 590 VFSNRGDFRGYCYVEFKEEKSAQQALELDRKNVEGRPMFVSP--CVDKSKNPDFK---VF 644
Query: 62 GY------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF 111
Y ++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++
Sbjct: 645 RYSTTLEKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEY 700
Query: 112 SDSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS--RSLPSNKRATSKVTDSAGL 168
+ S A +K+D ++ +K++ + PP++ + K R+ P ++ + G
Sbjct: 701 ENESQASQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGK 760
Query: 169 GTSNDADNSGAVTSNVAA 186
G + A A+ + AA
Sbjct: 761 GRTQLALLPRALQRHSAA 778
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E + L+ LF C ++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 558 VFVSNLPYSMDEPEAKLRPLFEACGEVVQIRPVFSNR--GDFRGYCYVEFKEEKSAQQAL 615
Query: 122 KLDQEVVRGRPVKISCAV 139
+LD++ V GRP+ +S V
Sbjct: 616 ELDRKNVEGRPMFVSPCV 633
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 209 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTGGPMRLY 268
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 269 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 328
Query: 126 EVVRGRPVKI 135
+ GRP++I
Sbjct: 329 FELAGRPMRI 338
>gi|296084770|emb|CBI25912.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ 42
+TFP++GK RGIAII+ +TE A KRAL LDG++ LF +IQ
Sbjct: 392 VTFPESGKIRGIAIISLKTEAAAKRALVLDGADRGELFQEIQ 433
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--------AKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A K A
Sbjct: 223 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 282
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 283 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 342
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 343 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 402
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + + S++AA A
Sbjct: 403 SGTASSTGLTTAASFNGGVSTISSLAAPA 431
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ ++ TE D+ + FS K+ +R ++ + RG +V+F D++S+ MA+ L
Sbjct: 184 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 243
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + G+PV + + K + S
Sbjct: 244 GQPLLGQPVMVKPSEAEKNLVQS 266
>gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120]
gi|81859084|sp|Q9WX37.3|RBPE_NOSS1 RecName: Full=Putative RNA-binding protein RbpE
gi|4850342|dbj|BAA77711.1| RNA binding protein [Anabaena variabilis]
gi|17131870|dbj|BAB74476.1| RNA binding protein [Nostoc sp. PCC 7120]
Length = 99
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+ +T++DL K+FS+ ++ ++ T++ETG RG+ V+ S + A++ L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 124 DQEVVRGRPVKISCAVP-PKKGINSKSRSLPSN 155
D GR +K++ A P +KG S S N
Sbjct: 63 DGAEWMGRVLKVNKARPREEKGARSGGGSWSRN 95
>gi|427781359|gb|JAA56131.1| Putative eukaryotic translation initiation factor 4bb
[Rhipicephalus pulchellus]
Length = 351
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNK-ETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNL +D+ +ED+ K F K+SS+R + G RG+ + +F D +L AL +
Sbjct: 91 VYLGNLPYDVCDEDVIKFFRGLKVSSVRLPRESGDRGRMRGFGYAEFPDRSTLLEALGYN 150
Query: 125 QEVVRGRPVKISCA 138
E ++ R +K+S A
Sbjct: 151 NENLKSRSIKVSLA 164
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 11/145 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAK--RTSDFTP 57
TGK RG ++F ++ A ++AL + G E+DG + + +P+ A+K+ R +
Sbjct: 205 TGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGKPH-ASKSNNDRAKQYGD 263
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+ ++IGNLS++ ++L +F + + S R T+ +T + +G+ +V FS
Sbjct: 264 SQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDE 323
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
AL+ ++ E + GRP ++ + P
Sbjct: 324 AKAALEAMNGEYIEGRPCRLDFSTP 348
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW+I + LK+ F + R + TG+ RGY +VDF + AL+
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 125 Q-EVVRGRPVKISCAV 139
Q + + GRP+ + +
Sbjct: 230 QGKEIDGRPINLDMST 245
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 11/145 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAK--RTSDFTP 57
TGK RG ++F ++ A ++AL + G E+DG + + +P+ A+K+ R +
Sbjct: 205 TGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGKPH-ASKSNNDRAKQYGD 263
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+ ++IGNLS++ ++L +F + + S R T+ +T + +G+ +V FS
Sbjct: 264 SQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDE 323
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
AL+ ++ E + GRP ++ + P
Sbjct: 324 AKAALEAMNGEYIEGRPCRLDFSTP 348
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LSW+I + LK+ F + R + TG+ RGY +VDF + AL+
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 125 Q-EVVRGRPVKISCAV 139
Q + + GRP+ + +
Sbjct: 230 QGKEIDGRPINLDMST 245
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 6 TGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPK- 58
TG+ RG ++F EG K A+ G E+DG L + +P A A R +D +
Sbjct: 288 TGRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKRH 347
Query: 59 ---IVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFS 112
+ + +++GNL +D+ ++ +++ F + +++S+R T+ ++G +G+ +V F+
Sbjct: 348 GDTLSPESDTLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFN 405
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSD 113
++ G+LSW+I ++ L + F + + R T K TG RG+ +VDF+D
Sbjct: 253 LFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFND 301
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+D+T EDLK FS +S ++ T++ETG RG+ V+ S+ + A+ L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
+ + +GR +K++ A P
Sbjct: 63 NGKEFKGRQLKVNKARP 79
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--------AKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A K A
Sbjct: 223 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 282
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 283 GARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 342
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 343 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 402
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + S++AA A
Sbjct: 403 SGTASSTGLTTAASIHGGVSTISSLAAPA 431
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ ++ TE D+ + FS K+ +R ++ + RG +V+F D++S+ MA+ L
Sbjct: 184 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 243
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + G+PV + + K + S
Sbjct: 244 GQPLLGQPVMVKPSEAEKNLVQS 266
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 176 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 235
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 236 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 295
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 296 FELAGRPMRV 305
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNLS+++TE+DLK +FS+ KI+ + ++E+G RG+A V+ ++ A+ L
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D+ GR +K++ A P
Sbjct: 63 DEAEWMGRALKVNKAKP 79
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 132 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 191
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 192 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 251
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 252 FELAGRPMRV 261
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ ++ LD
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRTSMALD 233
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ RGR +K+ + GI++ R P
Sbjct: 234 DSLFRGRQIKVIPKRTNRPGISTTDRGFP 262
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 175 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 234
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 235 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 294
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 295 FELAGRPMRV 304
>gi|156843476|ref|XP_001644805.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156115456|gb|EDO16947.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 384
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-TSDFTPKIVEGYNRI 66
K +G ++F+T+ + +AL S+++G L ++ K + + +D +RI
Sbjct: 164 KNKGFCYLDFKTDEKMLAVVALSESQLNGRNLLVKNSKDYEGRPDKNDLISMSKNPPSRI 223
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++GNLS+D T++ L+K F C +I +R T ++TG+ +G+A VDF + + AL D
Sbjct: 224 LFVGNLSFDTTDDLLRKHFQHCGEIIKIRMATFQDTGKCKGFAFVDFKNEEGATKAL-TD 282
Query: 125 QEV--VRGRPVKIS--------------CAVPPKKGIN---------SKSRSLPSNKRAT 159
+ + GRP+++ + PPK+ + S S P K+
Sbjct: 283 KSCRKIAGRPLRMEFGEDRSKRQVKRRDTSAPPKRDFDLNTNNIPVVSSSERKPVEKKRV 342
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANAG 189
S+ ++ + ++N +S A+ S A+A
Sbjct: 343 SRPSNKQYVDSNNRVKSSVALASAQRASAA 372
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIG 69
R + + T A+A ++G +++++ +A K+T + + + +I++G
Sbjct: 47 RCFGFVTYLTPEEANAAMAASPHTVEGNWVEVK--RAVPKKQTDESEAR--DKVKKIFVG 102
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
L DI E+DL FS ++ + + KETG+ RG+ V F+D + MA+ + V
Sbjct: 103 GLKNDIQEDDLTDYFSQFGEVENSEIMSEKETGKKRGFGFVHFTDHYAADMAVAVPFHTV 162
Query: 129 RGRPVKISCAVPPKKGINSKSR 150
G V++ AV PK+ + + SR
Sbjct: 163 NGHRVEVKKAV-PKQEMQAPSR 183
>gi|388583458|gb|EIM23760.1| hypothetical protein WALSEDRAFT_53459 [Wallemia sebi CBS 633.66]
Length = 306
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+++GNL +DI EE++ ++FS+ + R +K TG+ +GY V++ D + + A++ L
Sbjct: 14 VFVGNLPYDINEEEVVRIFSEVGPVKDFRMNFDKHTGKPKGYGFVEYYDGDTAASAVRNL 73
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSR 150
V GRP+++ A K + K R
Sbjct: 74 HDNPVGGRPLRVDLAPDDPKHVKQKER 100
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTG+ RG A + T + LDGS+ G L++ K K P E
Sbjct: 149 DTGRSRGFAFVTMSTVEDCNAVIENLDGSQFMGRILRVNFSDKPKPKE-----PLYPETE 203
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
+++++GNLSW +T E L + F + I R + ETG RGY V ++ + AL
Sbjct: 204 HKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALV 263
Query: 122 KLDQEVVRGRPVKISCA 138
L+ + GR +++S A
Sbjct: 264 SLNGVELEGRAMRVSLA 280
>gi|355717861|gb|AES06077.1| squamous cell carcinoma antigen recognized by T cells 3 [Mustela
putorius furo]
Length = 958
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 735 FSNRGDFRGYCYVEFKEEKSALQALQLDRKTVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 794
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 795 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 850
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A LK+D ++ +K++ + PP++ + K +R P ++ + G G +
Sbjct: 851 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGAMVPRQIYGARGKGRT 907
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E D L+ LF C +++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 702 VFVSNLPYSLGEPDVKLRPLFEACGEVAEIRPIFSNR--GDFRGYCYVEFKEEKSALQAL 759
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 760 QLDRKTVEGRPMFVSPCVDKSKNPDFK 786
>gi|301771702|ref|XP_002921271.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3-like [Ailuropoda melanoleuca]
Length = 964
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 740 FSNRGDFRGYCYVEFKEEKSALQALELDRKTVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 799
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 800 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 855
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A LK+D ++ +K++ + PP++ + K +R P ++ + G G +
Sbjct: 856 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGAMVPRQIYGARGKGRT 912
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 682 QKEKAAALKRD---VPKVPHDSSKDSITVFVSNLPYSLGEPDVKLRPLFEACGEVVEIRP 738
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+N+ G+FRGY +V+F + S AL+LD++ V GRP+ +S V K + K
Sbjct: 739 IFSNR--GDFRGYCYVEFKEEKSALQALELDRKTVEGRPMFVSPCVDKSKNPDFK 791
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALAL----DGSEMDGLFLKIQPYK-ATKA--------KR 51
+TG+ RG A F T +V+ A AL DGS+ G L++ + A+++ R
Sbjct: 147 NTGRSRGFA---FATMSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSR 203
Query: 52 TSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
+ +G +R+YIGNLSWD+ EE L ++FS+ + + ++ETG RG+ +
Sbjct: 204 SEQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFIT 263
Query: 111 FSDSLSLSMAL-KLDQEVVRGRPVKISCAV 139
FS A+ L+ + + GR +++ A+
Sbjct: 264 FSTQSEAEAAVASLNGKELEGRAMRVDLAL 293
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E A K E++G L K P + K +F P +
Sbjct: 148 ETDRSRGFGFVTMSTVEEADKAVEMFHSYELNGRLLTVNKAAPRGSRPEKAPREFCPLLS 207
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
E Y +GNL WD+ + L++L S+ K+ S R +++ET RG+ V + ++
Sbjct: 208 ESY----VGNLPWDVDNDRLEQLSSEHGKVLSARVVSDRETERSRGFGFVTMASETEMND 263
Query: 120 AL--KLDQEVVRGRPVKISCA 138
A LD E + GRP++++ A
Sbjct: 264 ATLGALDGESLEGRPIRVNVA 284
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T E+++ FS C I+ + +K TG+ +GYA+++FSD + + A +L+
Sbjct: 55 VYVGNVDYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQACQLN 114
Query: 125 QEVVRGRPVKIS 136
+ RGR +K++
Sbjct: 115 DSLFRGRQIKVT 126
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Query: 5 DTGKFRGIAIINF-RTEGAVKRALALDGSEMDGLFL------------KIQPYKATKAKR 51
+TG+ RG ++F +E A K A+ G E+DG L K Q A +AKR
Sbjct: 239 NTGRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKR 298
Query: 52 TSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVD 110
D + + +++GNL +D ++ +++ FS+ +++S+R T+ ++G +G+ +V
Sbjct: 299 HGD---TLSAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVT 355
Query: 111 F 111
F
Sbjct: 356 F 356
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 43 PYKATKAKRTSDFTPKIVEGYNR---IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNK 98
P K KA+ D PK + + ++ G+LSW + + L + F S I S R T+K
Sbjct: 179 PSKKRKAEDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDK 238
Query: 99 ETGEFRGYAHVDFSDSLSLSMALKLDQ-EVVRGRPVKISCA 138
TG RG+ +VDF DS S + A + Q + + GR + + A
Sbjct: 239 NTGRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYA 279
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F AV A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 175 KGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEK-NRLAAMANNLQKGSGGPLRL 233
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 234 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLN 293
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 294 GFELAGRPMRV 304
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 193 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 252
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 253 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 312
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 313 FELAGRPMRV 322
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTG+ RG A + + + LDGSE G L++ K K P E
Sbjct: 147 DTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK-----LPLYPETE 201
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNLSW +T E L ++F + + R + ETG RGY V +S + AL+
Sbjct: 202 YKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261
Query: 123 -LDQEVVRGRPVKI 135
L+ + GR +++
Sbjct: 262 SLNGVELEGRAIRV 275
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
+YIGNLS+D++EEDLK +F++ + ++ T++ETG RG+A V+ SDS + L
Sbjct: 3 VYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEMDSDSEEEAAIEAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
I+IGNL ++++E+DLK++F+D + S+R ++ETG RG+A V+ + A++ L
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K+S A P
Sbjct: 63 DGAKWIGRSLKVSKARP 79
>gi|392395169|ref|YP_006431771.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526247|gb|AFM01978.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 116
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNL W+ T EDL F ++ S R T++ETG RG+ V+ D + MA L+
Sbjct: 37 LYVGNLPWNTTSEDLSSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDATRMAEDLN 96
Query: 125 QEVVRGRPVKISCAVPPKK 143
+ GRP+ ++ A P ++
Sbjct: 97 GKDFGGRPLTVNEARPKQQ 115
>gi|344232964|gb|EGV64837.1| hypothetical protein CANTEDRAFT_104139 [Candida tenuis ATCC 10573]
Length = 360
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP-KIVEGYNR 65
K +G +F+TE + + + L + ++G L I+ ++ + + +D + K++
Sbjct: 134 NKIKGFCYADFKTEDQMNQVIKLSETNLNGRNLLIKNAQSFEGRPEADKSDNKLISASKN 193
Query: 66 -----IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+++GNLS+D TE+ L++ F C +I +R T ++TG+ +G+A VDF D +
Sbjct: 194 PPSRILFVGNLSFDTTEDLLEEHFRHCGEIIKIRMATFEDTGKCKGFAFVDFKDEAGATA 253
Query: 120 AL--KLDQEVVRGRPVKI 135
AL L ++++ RPV++
Sbjct: 254 ALTSALTRKLI-NRPVRM 270
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 66 IYIGNLSWDITEEDLKKLF---SDCKISSL-RFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++IGNLS+D T ED+ + +D + + RF K+ + +G+ + DF ++ +
Sbjct: 95 VWIGNLSFDTTREDILRYIKAKTDVEEDDIVRFNLPKKQNKIKGFCYADFKTEDQMNQVI 154
Query: 122 KLDQEVVRGRPVKISCA 138
KL + + GR + I A
Sbjct: 155 KLSETNLNGRNLLIKNA 171
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + +K +G +G+A+++F+D S+ A+ LD
Sbjct: 123 IYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALD 182
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + RGR +K+ + GI++
Sbjct: 183 ESLFRGRQIKVMTKRTNRPGIST 205
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 174 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 233
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 234 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 293
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 294 FELAGRPMRV 303
>gi|195579698|ref|XP_002079698.1| GD21886 [Drosophila simulans]
gi|194191707|gb|EDX05283.1| GD21886 [Drosophila simulans]
Length = 436
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYK-ATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + + ++AL+L+G+E L++ P A K + D P + I++G+L
Sbjct: 209 AYVVLQNPEIAQQALSLNGTEFKENHLRVTPASMAEKFSQGKDQQPSDKDAKRTIFVGSL 268
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+ TEE L+++FS C +I +R + + G +G A+V F ++ +AL+L+Q ++
Sbjct: 269 KYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLLDD 327
Query: 131 RPVKIS 136
RP+ +
Sbjct: 328 RPINVE 333
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 194 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 313
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 314 FELAGRPMRV 323
>gi|429856471|gb|ELA31378.1| RNA recognition motif containing protein, partial [Colletotrichum
gloeosporioides Nara gc5]
Length = 153
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + + F C I ++R ++E +G+A+ +F D L AL LD +
Sbjct: 80 HLGNLSYDATVETVTEFFEGCNIVNVRIIEDREQQRPKGFAYAEFQDLEGLKQALTLDGQ 139
Query: 127 VVRGRPVKISCAVP 140
+GR ++I A P
Sbjct: 140 SFQGRVIRIKVADP 153
>gi|268536642|ref|XP_002633456.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae]
Length = 393
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query: 15 INFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR---IYIGNL 71
+ F E +V++AL +G++++ +++ K G+ + I++GNL
Sbjct: 207 VKFEEEESVEKALKYNGTKLEDHLIRVDTVGTKK-------------GFGKDMAIFVGNL 253
Query: 72 SWDITEEDLKKLFSDC--KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVR 129
+DITE+ L F++ I ++R +K++G+ +G+A V+F S S+AL ++ +
Sbjct: 254 PFDITEDTLSNFFTEKVGAIEAVRIIRDKDSGKGKGFAFVNFKQDSSASLALSMETIKMD 313
Query: 130 GRPVKISCAVPPKKG----INSKSRSLPSNKRAT 159
R ++I+ + KKG I S + P +K+ T
Sbjct: 314 KRDLRITKVM--KKGHLTKIQSAKKRAPLSKKQT 345
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
+YIGNL++++TE+DLK +F+D + + T++ETG RG+A V+ +DS S +L
Sbjct: 3 VYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIEEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
T + RG A + + K A+ + DGS++ G +K+ + + + PKI Y
Sbjct: 283 TDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYR 342
Query: 65 -------RIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+IY GNLSW +T E L+ F+D + + +E+G RG+ + F+ + +
Sbjct: 343 GFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAEN 402
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
AL EV V GRP++++ A
Sbjct: 403 AESALNAMBEVEVEGRPLRLNLA 425
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
+TGK RG A + F T A + AL L G E+DG + I + A + R + + K
Sbjct: 350 NTGKSRGFAYVTFATAEAAQAALQLTGKEIDGRPVNIDMTTERDPNAARQNRAAAYGDKP 409
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
E +++GNLS+ TE+ L + FS+ + S+R T++ETG +G+A+V+FSD +
Sbjct: 410 SEPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAK 469
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
A + + + + GR V++ + P
Sbjct: 470 SAYEGVSGKEIAGRAVRLDYSQP 492
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++G LSW++ E L + F+DC ++ S R ++ TG+ RG+A+V F+ + + AL+L
Sbjct: 316 IFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFATAEAAQAALQLT 375
Query: 125 QEVVRGRPVKI 135
+ + GRPV I
Sbjct: 376 GKEIDGRPVNI 386
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ ++ LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRTSMALD 260
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLP 153
+ RGR +K+ + GI++ R P
Sbjct: 261 DSLFRGRQIKVIPKRTNRPGISTTDRGFP 289
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 210 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 269
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 270 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 329
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 330 FELAGRPMRV 339
>gi|157131013|ref|XP_001655777.1| hypothetical protein AaeL_AAEL011961 [Aedes aegypti]
gi|108871686|gb|EAT35911.1| AAEL011961-PA [Aedes aegypti]
Length = 886
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR 65
+GK RG + F E V++AL+ D +DG + I K+ R ++F N+
Sbjct: 668 SGKSRGFGYVEFENEQDVQKALSFDRRPLDGRPVFISSLARDKSNRQNEFKHSEKFELNK 727
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA-LKL 123
+++ L ++ T +D++KLF K+ +R + +G A+V++ ++ A L L
Sbjct: 728 LFVKGLPFEATNDDVRKLFEPYGKLKDVRVVYYCSS---KGLAYVEYESEVAAKNAVLHL 784
Query: 124 DQEVVRGRPVKISCAVPPKKG 144
DQ + G + ++ + PP +G
Sbjct: 785 DQHNMNGSTITVAISAPPPRG 805
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 40 KIQPYKATKAKRTSDFTPKIVEGYN---RIYIGNLSWDITEEDLKKLFSDCKISSLRFGT 96
K +P KR PK V+ N R+ NLS++ITE+ ++ F + K S+
Sbjct: 606 KPEPSLEDTTKRIRLDEPKPVDTSNDSKRLIFSNLSFEITEDQIRATFPELKFKSIEL-V 664
Query: 97 NKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKIS 136
+ +G+ RG+ +V+F + + AL D+ + GRPV IS
Sbjct: 665 HGSSGKSRGFGYVEFENEQDVQKALSFDRRPLDGRPVFIS 704
>gi|427787685|gb|JAA59294.1| Putative eukaryotic translation initiation factor 4h [Rhipicephalus
pulchellus]
Length = 270
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL + + D+ ++F +I S R +KET +F+GY +V+F D SL AL+ D
Sbjct: 36 FVGNLPDGVVQSDIDEIFHGIRIKSTRLVRDKETDKFKGYCYVEFFDLDSLKEALEFDSA 95
Query: 127 VVRGRPVKISCA 138
++GR +++ A
Sbjct: 96 DLQGRSLRVDIA 107
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK--------AKRTSDFTPKIVE 61
RGI + F +V A+AL G + G + ++P +A K A
Sbjct: 272 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 331
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
G R+Y+GNL +++E+DL+K+F L ETG +G+ V F+ AL
Sbjct: 332 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 391
Query: 122 KLDQEV-VRGRPVKISCAVP----PKKG-----------------INSKSRSLPSNKRAT 159
L+ ++ + GR +K+S P+ G +N++SR+L K
Sbjct: 392 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 451
Query: 160 SKVTDSAGLGTSNDADNSGAVTSNVAANA 188
S S GL T+ + + S++AA A
Sbjct: 452 SGTASSTGLTTAASFNGGVSTISSLAAPA 480
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++ ++ TE D+ + FS K+ +R ++ + RG +V+F D++S+ MA+ L
Sbjct: 233 VFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALS 292
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + G+PV + + K + S
Sbjct: 293 GQPLLGQPVMVKPSEAEKNLVQS 315
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT------SDFTPKI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ S+ +
Sbjct: 238 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQS 297
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++R+Y+GN+ + ITE DL+ +F +E G +GY V F D
Sbjct: 298 IP-FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQARE 356
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 357 ALEKMNGFDLAGRPIRV 373
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + E+L++ F C I+ + NK G +G+A+++F+D S+ A+ +D
Sbjct: 97 IYVGNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFADKDSVQTAMAMD 156
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ + RGR +K++ K G+++ +R
Sbjct: 157 ESLFRGRQIKVNPKRTNKPGMSTSNR 182
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 209 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 268
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 269 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 328
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 329 FELAGRPMRV 338
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F AV A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 193 KGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEK-NRLAAMANNLQKGSGGPLRL 251
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 252 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLN 311
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 312 GFELAGRPMRV 322
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG--- 62
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ +
Sbjct: 239 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDSHANSNHQA 298
Query: 63 --YNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++R+Y+GN+ + ITE DL+ +F +E G +GY V F D A
Sbjct: 299 IPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREA 358
Query: 121 L-KLDQEVVRGRPVKI 135
L K++ + GRP+++
Sbjct: 359 LEKMNGFDLAGRPIRV 374
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F AV A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 209 KGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEK-NRLAAMANNLQKGSGGPLRL 267
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 268 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLN 327
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 328 GFELAGRPMRV 338
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M P T K RG + + V A A +DG +++P +A R P+
Sbjct: 76 MKDPKTRKSRGFGFVTYARAFMVDEAQAARPHRVDGR--EVEPKRAVP--RDLIGKPEAS 131
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
++++G L D+ EEDL+K FS I+S+ T KET + RG+A V+F D +
Sbjct: 132 STVKKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDK 191
Query: 120 ALKLDQEVVRGRPVKISCAV 139
+ + V+GR + + A+
Sbjct: 192 VVLIRDHTVKGRHLDVKKAI 211
>gi|340503205|gb|EGR29817.1| RNA binding motif protein 34, putative [Ichthyophthirius
multifiliis]
Length = 330
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I+IGNL + ITEE L+ F DC I +LR + T +G+ ++ F D LS AL +
Sbjct: 162 IFIGNLPFQITEEALRNHFIDCGNIQNLRIIRDPYTHNGKGFGYIYFEDILSFKNALLKN 221
Query: 125 QEVVRGRPVKISCAVPPKKGI 145
++ R +++ AVP KK I
Sbjct: 222 GSLLEKRSIRVKKAVPEKKLI 242
>gi|195483935|ref|XP_002090493.1| GE13151 [Drosophila yakuba]
gi|194176594|gb|EDW90205.1| GE13151 [Drosophila yakuba]
Length = 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEGYNRIYIG 69
A + + ++AL+L+G+E L++ P A KA+ + +D P + I++G
Sbjct: 206 AYVVLQNPEIAQQALSLNGTEFKENHLRVTP--AAKAEGFGQGADQQPSDKDAKRTIFVG 263
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
+L + TEE L+++FS C +I +R + + G +G A+V F ++ +AL+L+Q ++
Sbjct: 264 SLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLL 322
Query: 129 RGRPVKIS 136
RP+ +
Sbjct: 323 DDRPINVE 330
>gi|73994825|ref|XP_864427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Canis lupus familiaris]
Length = 964
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 740 FSNRGDFRGYCYVEFKEEKSALQALELDRKTVEGRPMFVSPCVDKSKHPDFKVFRYSTAL 799
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 800 EKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 855
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A LK+D ++ +K++ + PP++ + K P K+A
Sbjct: 856 SQAVLKMDGMTIKENVIKVAISNPPQRKVPEK----PETKKA 893
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E + L+ LF C +++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 707 VFVSNLPYSMDEPEVKLRPLFEACGEVTEIRPIFSNR--GDFRGYCYVEFKEEKSALQAL 764
Query: 122 KLDQEVVRGRPVKISCAVPPKK 143
+LD++ V GRP+ +S V K
Sbjct: 765 ELDRKTVEGRPMFVSPCVDKSK 786
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 192 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 251
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 252 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 311
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 312 FELAGRPMRV 321
>gi|261197860|ref|XP_002625332.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595295|gb|EEQ77876.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|327355588|gb|EGE84445.1| hypothetical protein BDDG_07390 [Ajellomyces dermatitidis ATCC
18188]
Length = 301
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
++IGNLS+++T+ +L ++F D + +R +K TG RG+AH DF D S ++L
Sbjct: 180 LFIGNLSFEMTDRELNEMFKDIPNVKDVRVSVDKRTGRPRGFAHADFLDVESAQAGMELL 239
Query: 125 QE-VVRGRPVKISCAV 139
++ GRP++I ++
Sbjct: 240 KDKAPYGRPLRIDFSL 255
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 143 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 202
Query: 125 QEVVRGRPVKISCAV 139
+ + RGR +K+S +
Sbjct: 203 ESLFRGRQIKVSSML 217
>gi|358058197|dbj|GAA95989.1| hypothetical protein E5Q_02647 [Mixia osmundae IAM 14324]
Length = 959
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS---------------- 53
+G+ + F V+RALAL G ++ G+ +++Q +A K ++ S
Sbjct: 315 KGVGYVEFMELETVQRALALSGMKVLGVPIQVQYTEAEKNRQASTAQSSYGALMDAGFTI 374
Query: 54 ----DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAH 108
D TP YN +Y+G+L++ +T +D++++F+ ++S+ T+ +G+ +GY +
Sbjct: 375 PAGSDATPSGAVPYNVLYVGSLNYSLTADDMREVFTPFGAVASVDLQTDPGSGKSKGYCY 434
Query: 109 VDFSDSL-SLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLP 153
V F + ++ K++ + GR ++IS + SRS P
Sbjct: 435 VQFYKHVDAIHAREKMNGFQLAGRQLRISTISERNAILPPMSRSGP 480
>gi|242048714|ref|XP_002462103.1| hypothetical protein SORBIDRAFT_02g019325 [Sorghum bicolor]
gi|242068145|ref|XP_002449349.1| hypothetical protein SORBIDRAFT_05g008468 [Sorghum bicolor]
gi|241925480|gb|EER98624.1| hypothetical protein SORBIDRAFT_02g019325 [Sorghum bicolor]
gi|241935192|gb|EES08337.1| hypothetical protein SORBIDRAFT_05g008468 [Sorghum bicolor]
Length = 295
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 212 TCYECGEKGHLSSACLKKTADQTMVTGKVSDN---AGSRTGNFADNAGLGTTNVSDNAGL 268
TC++C ++GH C K +++M K+ + A ++ + NA + + V D A L
Sbjct: 107 TCFKCKKEGHHVKDCTLKKEEKSM--SKIQEKKKMAHVKSSSMEHNAFVCSNKVDDQATL 164
Query: 269 SAVSGKIRRRTCYECGEKGHLSSACPKKTADQTNSTT 305
+ +R CYEC EKGH +CP K ++ +S+T
Sbjct: 165 PKNKTRRSKRKCYECKEKGHEIDSCPNKKSEGLSSST 201
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 28/179 (15%)
Query: 128 VRGRPVK--ISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVA 185
V+ +P K I+C K+G + K +L +++ SK+ + + +S++
Sbjct: 97 VQHQPKKTLITCFKCKKEGHHVKDCTLKKEEKSMSKIQEKKKMA--------HVKSSSME 148
Query: 186 ANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNAG 245
NA ++ V + L + +R CYEC EKGH +C K S+
Sbjct: 149 HNAFVCSNKVDDQATLPKNKTRRSKRKCYECKEKGHEIDSC----------PNKKSEGLS 198
Query: 246 SRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTADQTNST 304
S T F N S R CY C EKGHLS CP + NS+
Sbjct: 199 SSTKRFFSKVASKMQEKKANKNKS--------RLCYTCREKGHLSMDCPMGNTPKLNSS 249
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 50 KRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAH 108
K+ ++ TP+ E +++G LSW++ +E LK+ F + + S R + TG+ RGY +
Sbjct: 167 KQKTEETPEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGY 226
Query: 109 VDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
VDFS + AL +L + + GRPV + + K ++ SN RA
Sbjct: 227 VDFSSKAAAEKALNELQGKEIDGRPVNLDMST-------GKPKTPASNDRA 270
>gi|223647362|gb|ACN10439.1| Eukaryotic translation initiation factor 4H [Salmo salar]
Length = 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDAIFKDLNVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 104
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 105 LLGDRSLRVDIA 116
>gi|213510756|ref|NP_001133347.1| Eukaryotic translation initiation factor 4H [Salmo salar]
gi|209151312|gb|ACI33070.1| Eukaryotic translation initiation factor 4H [Salmo salar]
Length = 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDAIFKDLNVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 104
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 105 LLGDRSLRVDIA 116
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG + T E A K + +++G L + KA D P+ E
Sbjct: 157 ETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVN--KAAPRGARVDRPPRAFEPA 214
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
R+Y+GNL W + + L+++FS+ K+ R ++ETG RG+ V S L A+
Sbjct: 215 FRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIA 274
Query: 122 KLDQEVVRGRPVKISCA 138
LD + + GR ++++ A
Sbjct: 275 ALDGQSLDGRAIRVNVA 291
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+ +T++DL K+FS+ ++ ++ T++ETG RG+ V+ + + A+ L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEMESEAAETAAISAL 62
Query: 124 DQEVVRGRPVKISCAVPPKK---GINSKSRS 151
D GR +K++ A P ++ G K RS
Sbjct: 63 DGAEWMGRALKVNKARPKEEKNDGYGGKQRS 93
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT------SDFTPKI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ S+ +
Sbjct: 236 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQS 295
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++R+Y+GN+ + ITE DL+ +F +E G +GY V F D
Sbjct: 296 IP-FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQARE 354
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 355 ALEKMNGFDLAGRPIRV 371
>gi|307190796|gb|EFN74665.1| RNA-binding protein 34 [Camponotus floridanus]
Length = 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 12 IAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR--IYIG 69
+ IN++++ + ++AL+++G G ++ +Q K+ E N+ ++I
Sbjct: 211 VVYINYKSKESAQKALSMNGKIFQGNYIHVQIVSDKSMKK---------EWNNKKAVFIA 261
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + K F C I S+ +KETG+ +G+ +++F D ++ AL+LD +
Sbjct: 262 NLRYGTDNNTIWKHFGICGDIESVHLVRDKETGQTKGFGYINFIDENAVLCALELDGTEI 321
Query: 129 RGRPVKISCAVPPKKGINS-----KSRSLPSNKRATSKVTDSAGLGTS 171
RPV++ P K INS + R PSN + LG +
Sbjct: 322 MNRPVRVE----PYK-INSANKKGRKRDCPSNNDDNPRKKSKNNLGET 364
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR 51
+TG+ +G INF E AV AL LDG+E+ ++++PYK A +
Sbjct: 292 ETGQTKGFGYINFIDENAVLCALELDGTEIMNRPVRVEPYKINSANK 338
>gi|345323818|ref|XP_001507791.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Ornithorhynchus anatinus]
Length = 1013
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E A RAL LD + G + + P K F
Sbjct: 792 FSNRGDFRGYCYVEFKEEKAALRALGLDRQLVAGRPMFVSPCVDKNKHPDFKVFRYSTAL 851
Query: 62 GYNRIYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
++++I L + T+E+L+++ + + LR TN+ G+ +G A+V++ + S A
Sbjct: 852 EKHKLFISGLPFSCTKEELEEICQAHGTVKDLRLVTNR-AGKPKGLAYVEYENEAQASQA 910
Query: 121 -LKLDQEVVRGRPVKISCAVPPKK 143
LK+D V+ +K++ + PP++
Sbjct: 911 VLKMDGMTVKQNTIKVAISNPPQR 934
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E L+ LF C ++S +R +N+ G+FRGY +V+F + + AL
Sbjct: 759 VFVSNLPYSMGEPAGALRPLFEGCGEVSEIRPIFSNR--GDFRGYCYVEFKEEKAALRAL 816
Query: 122 KLDQEVVRGRPVKISCAVPPKK 143
LD+++V GRP+ +S V K
Sbjct: 817 GLDRQLVAGRPMFVSPCVDKNK 838
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 208 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMRLY 267
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 268 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 327
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 328 FELAGRPMRV 337
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKI-----QPYKATKAK--RTSDFTP 57
TGK RG ++F ++ A ++A+ + G E+DG + + +P+ ATK R F
Sbjct: 272 TGKSRGYGYVDFTSKAAAEKAIEEMQGREIDGRPINLDLSTGRPH-ATKPNNDRAKQFGD 330
Query: 58 KIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+ + ++IGNLS++ + L ++F + + S R T+ +T + +G+ +V F
Sbjct: 331 QQSPPSDTLFIGNLSFNANRDKLFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFGSVDE 390
Query: 117 LSMALK-LDQEVVRGRPVKISCAVP 140
AL+ L+ E + GRP ++ + P
Sbjct: 391 AKAALEALNGEYLEGRPCRLDFSAP 415
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 48 KAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGY 106
KAK S T E ++ G LSW+I ++ LK+ F + + R + TG+ RGY
Sbjct: 219 KAKSESTTTTATDEEPATVFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGY 278
Query: 107 AHVDFSDSLSLSMALKLDQ-EVVRGRPVKISCAV 139
+VDF+ + A++ Q + GRP+ + +
Sbjct: 279 GYVDFTSKAAAEKAIEEMQGREIDGRPINLDLST 312
>gi|298707925|emb|CBJ30311.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ-------------PYK-ATK 48
+ D+G+ RG A + F + A DG ++G +L +Q P + AT+
Sbjct: 163 WQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATE 222
Query: 49 AKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYA 107
R ++ + G +++ NL +D+ E+ + + + C +I+S+R T + +G+
Sbjct: 223 KARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFG 282
Query: 108 HVDFSDSLSLSMALKLDQEV-VRGRPVKISCAVPPKKG 144
+V+FS ++ Q + + GRP+ + KG
Sbjct: 283 YVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKG 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+ + W E D+++ F C KI+ +R +++G RGYAHV F+ S A D
Sbjct: 131 VYVEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRD 190
Query: 125 QEVVRGRPVKI 135
+ + GR + +
Sbjct: 191 GQYLNGRYLTV 201
>gi|410909782|ref|XP_003968369.1| PREDICTED: eukaryotic translation initiation factor 4H-like isoform
2 [Takifugu rubripes]
Length = 236
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL + + D+ ++F + I S+R +KET F+G+ +V+F D SL AL D
Sbjct: 48 YVGNLPFKTVQGDIDQIFKELNIRSIRLVRDKETDRFKGFCYVEFEDLESLKEALTYDGA 107
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 108 LLEERSLRVDIA 119
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRT------SDFTPKI 59
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K ++ S+ +
Sbjct: 204 SGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQS 263
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ ++R+Y+GN+ + ITE DL+ +F +E G +GY V F D
Sbjct: 264 IP-FHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQARE 322
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GRP+++
Sbjct: 323 ALEKMNGFDLAGRPIRV 339
>gi|134082739|emb|CAK42631.1| unnamed protein product [Aspergillus niger]
Length = 489
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 82 HVGNLSFDATAADISDLFADCGVTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLSGA 141
Query: 127 VVRGRPVKISCAVP 140
++GR ++ S A P
Sbjct: 142 TLQGRAIRTSIAEP 155
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G +GIA + F TE A+ G E G + ++ K + +R + G +
Sbjct: 348 GNSKGIAFVRFSTEDGQSAAVEYSGQEHMGRTITVEKTKP-RDQRPQQGGQQGGSGESTT 406
Query: 67 -YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+IGN+S+ TE+ L +F DC KI +R + E G+ RG+ +V+F D+ S L
Sbjct: 407 CFIGNMSFYATEDSLYPVFEDCGKIKEVRIAKDAE-GKSRGFGYVEFFDNESAQKGLAKT 465
Query: 125 QEVVRGRPVKISCA 138
V GR +++ A
Sbjct: 466 GTDVEGRAIRVDLA 479
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRF--GTNKETGEFRGYAHVDFSDSLSLSMA 120
+ +++ LS+D TE+D+K+ F +C I+S+ G N G +G A V FS S A
Sbjct: 311 HEVFVRGLSFDATEQDIKEFFDECGNINSVNLLKGPN---GNSKGIAFVRFSTEDGQSAA 367
Query: 121 LKLDQEVVRGRPVKISCAVP 140
++ + GR + + P
Sbjct: 368 VEYSGQEHMGRTITVEKTKP 387
>gi|76155986|gb|AAX27232.2| SJCHGC02553 protein [Schistosoma japonicum]
Length = 246
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL---- 121
+Y+GNL + + +F C I S+R +K+T EF+G+A+VDF D SL AL
Sbjct: 6 VYVGNLPPNTIQGHFDYIFPGCDIESIRLVRDKQTDEFKGFAYVDFKDEQSLQKALATHG 65
Query: 122 -KLDQEVVRGRPV 133
K+ + +R P
Sbjct: 66 AKIGEYTIRVNPA 78
>gi|376297103|ref|YP_005168333.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323459665|gb|EGB15530.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 86
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + TE D++ LF + +SS++ + ETG FRG+ V+ D+ + S LD
Sbjct: 4 IYVGNIPFGATENDVRNLFGEYGDVSSVKLIQDHETGRFRGFGFVEMEDADAASAIEALD 63
Query: 125 QEVVRGRPVKISCAVP 140
+ GRP+K++ A P
Sbjct: 64 GHEMSGRPLKVNEAKP 79
>gi|194880593|ref|XP_001974476.1| GG21761 [Drosophila erecta]
gi|190657663|gb|EDV54876.1| GG21761 [Drosophila erecta]
Length = 455
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK---RTSDFTPKIVEGYNRIYIG 69
A + + K+ALA++G+E L++ P A KA+ + D P + I++G
Sbjct: 228 AYVVLQNPDIAKQALAMNGTEFKENHLRVTP--AAKAEGFGQGKDEQPNDKDAKRTIFVG 285
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
+L + EE L+++FS C +I +R + + G +G A+V F ++ +AL+L+Q ++
Sbjct: 286 SLKYSANEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLL 344
Query: 129 RGRPVKIS 136
RP+ +
Sbjct: 345 DDRPINVE 352
>gi|147795422|emb|CAN72536.1| hypothetical protein VITISV_028746 [Vitis vinifera]
Length = 344
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ 42
+TFP++GK RGIAII+ +TE A KRAL LDG++ LF +IQ
Sbjct: 101 VTFPESGKIRGIAIISLKTEAAAKRALVLDGADRGELFQEIQ 142
>gi|145499158|ref|XP_001435565.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402698|emb|CAK68168.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 7 GKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
G +GIA + F TE A A+ G + G + ++ K +
Sbjct: 390 GYSKGIAFVRFSTEDAQNSAVEYSGQDHMGRTITVEKTKPRDQRPQQGGQQGGQGESTTC 449
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++GNLS+ TE+ L +F DC KI +R + E G+ RG+ +V++ D+ S L
Sbjct: 450 FVGNLSFYATEDSLYPIFEDCGKIKEVRIAKDAE-GKSRGFGYVEYFDNASAQKGLSKTG 508
Query: 126 EVVRGRPVKISCA 138
V GR +++ A
Sbjct: 509 TDVEGRAIRVDLA 521
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
T P TG+ RG + F+ +V R L L ++DG + + KA K K PK
Sbjct: 63 TDPLTGRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRAKAIKGKE----PPK--- 115
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
++++G LS DITEE L++ F +I S+ T+ +T E RG+ V F+
Sbjct: 116 ---KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFA 164
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 65 RIYIGNLSWDITEEDLKKLFS------DCKISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+++IG LSWD +++DL S DC I T+ TG RG+ V F D+ S+
Sbjct: 31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIK-----TDPLTGRSRGFGFVLFKDAESVD 85
Query: 119 MALKLDQEVVRGRPVK------ISCAVPPKK 143
L+L + + G+ + I PPKK
Sbjct: 86 RVLELTEHKLDGKLIDPKRAKAIKGKEPPKK 116
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 18/130 (13%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK----------RTSDF 55
+G+ +G+ + F+ +V +A+AL G + G+ + +Q +A K + R D
Sbjct: 201 SGRSKGVGYVEFKEAESVPKAIALTGQRLLGIPIIVQLTEAEKNRQARAEGGQHNRDEDH 260
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFS---DCKISSLRFGTNKETGEFRGYAHVDFS 112
I ++R+Y+GN+ + ITE +L+++F+ D + L+ +E+G RGY V +
Sbjct: 261 RRTI--PFHRLYVGNIHFSITENELQQVFAPFGDLEFVQLQ---KEESGRSRGYGFVQYR 315
Query: 113 DSLSLSMALK 122
D + AL+
Sbjct: 316 DPNNAKEALE 325
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L++ F C I+ + N+ G +G+A+++F D S+ A+ +D
Sbjct: 102 IYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKGFAYIEFGDRDSVQTAMAMD 161
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS 160
+ + RGR +K+ + GI++ +R P R S
Sbjct: 162 ESLFRGRQIKVMPKRTNRPGISTTNR--PPRGRGVS 195
>gi|17539754|ref|NP_502291.1| Protein F11A10.7 [Caenorhabditis elegans]
gi|15718191|emb|CAC70081.1| Protein F11A10.7 [Caenorhabditis elegans]
Length = 394
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 15 INFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWD 74
+ F E +V++AL +G+++D +++ + K + D I++GNL ++
Sbjct: 206 VKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMA---------IFVGNLPFE 256
Query: 75 ITEEDLKKLFSDC--KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRP 132
ITE+ L FS + ++R +K+TG+ +G+A V+F S+S+AL ++ + R
Sbjct: 257 ITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIKMEKRD 316
Query: 133 VKISCAVPPKKG 144
++I+ + KKG
Sbjct: 317 LRITKVM--KKG 326
>gi|410909780|ref|XP_003968368.1| PREDICTED: eukaryotic translation initiation factor 4H-like isoform
1 [Takifugu rubripes]
Length = 262
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL + + D+ ++F + I S+R +KET F+G+ +V+F D SL AL D
Sbjct: 48 YVGNLPFKTVQGDIDQIFKELNIRSIRLVRDKETDRFKGFCYVEFEDLESLKEALTYDGA 107
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 108 LLEERSLRVDIA 119
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 262 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 321
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 322 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNG 381
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 382 FELAGRPMRV 391
>gi|121716823|ref|XP_001275920.1| translation initiation factor 4B [Aspergillus clavatus NRRL 1]
gi|119404077|gb|EAW14494.1| translation initiation factor 4B [Aspergillus clavatus NRRL 1]
Length = 511
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T D+ LF+DC ++++R +K T +G+ +V+F L AL L
Sbjct: 80 HVGNLSFEATSADISDLFADCSVTNVRIVEDKLTRSPKGFGYVEFETVDGLKKALDLSGT 139
Query: 127 VVRGRPVKISCAVP 140
++GR +++S A P
Sbjct: 140 TLQGRAIRVSIAEP 153
>gi|451995479|gb|EMD87947.1| hypothetical protein COCHEDRAFT_1159154 [Cochliobolus
heterostrophus C5]
Length = 523
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D TE D+ F+ C+++++R +K + +G+ +V+F L AL L
Sbjct: 76 HLGNLSFDATEGDVTDFFAGCEVTNVRIVEDKLDRKPKGFGYVEFGSVDGLKKALDLSGT 135
Query: 127 VVRGRPVKISCAVPPK 142
+GR +++S A PPK
Sbjct: 136 SFQGRNIRVSVAEPPK 151
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI 59
+ + G +G + F + A +RA+ AL+ +G + +Q + R P
Sbjct: 914 LVLDNRGISKGYGYVQFDSIDAAQRAVDALNLRLFEGRRVTVQFAQNNVYHRRQLNAPT- 972
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+YIGNL +++T+ DL +LF D + + +R ++ TG+ RG+AH +F + S
Sbjct: 973 ----RTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAK 1028
Query: 119 MALK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
A+ L+ ++ GR +++ + + + +S P+ +
Sbjct: 1029 AAMAVLENKLPYGRRLRLDYSKATSRTVVGNDKSAPAEQ 1067
>gi|309384241|ref|NP_001184258.1| eukaryotic translation initiation factor 4H isoform 3 [Danio rerio]
Length = 207
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 47 YVGNLPFNTVQGDIDAIFRDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 106
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 107 LLGDRSLRVDIA 118
>gi|225708452|gb|ACO10072.1| Eukaryotic translation initiation factor 4H [Osmerus mordax]
Length = 264
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 45 YVGNLPFNTVQGDIDAIFKDLNVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 104
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 105 LLGDRSLRVDIA 116
>gi|388853962|emb|CCF52460.1| related to Cleavage stimulation factor [Ustilago hordei]
Length = 402
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GN+ +D++EE L +F + K+ R ++ETG+F+GY +F D + + A
Sbjct: 7 GSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPETAASA 66
Query: 121 LK-LDQEVVRGRPVKISCA 138
++ L++ V GR ++IS A
Sbjct: 67 VRNLNEVEVGGRALRISFA 85
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEMD-GLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A I F+ E + AL +G E+ G ++++ R S + + I++GNL
Sbjct: 210 AYIVFKEEESATDALKWNGHEIQAGFYIRVD--------RVSQHSKH--DHKRSIFVGNL 259
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+DI+E L+ F +C I ++R ++++G +G+ +V F S+ +ALKL+ ++
Sbjct: 260 PYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNGSTLQQ 319
Query: 131 RPVKISCAV 139
R +++ +V
Sbjct: 320 RKIRVKRSV 328
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKI-SSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + TEE+++ LF DC + ++ +K TG +G+ +V+F++ ++ +A+ LD
Sbjct: 13 IYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAEPNAVPLAMALD 72
Query: 125 QEVVRGRPVKI 135
+ + GR +K+
Sbjct: 73 ESMFHGRQIKV 83
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E A K ++DG L K P A + F P
Sbjct: 43 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSF- 101
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
RIY+GNL W + + L +LFS+ K+ R ++ETG RG+ V + L
Sbjct: 102 ----RIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDD 157
Query: 120 AL-KLDQEVVRGRPVKISCAV--PPKKGI 145
A+ LD + + GR ++++ A PP++G
Sbjct: 158 AIAALDGQSLDGRALRVNVAEERPPRRGF 186
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 143 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 202
Query: 125 QEVVRGRPVKISCAV 139
+ + RGR +K+S +
Sbjct: 203 ESLFRGRQIKVSSML 217
>gi|75906252|ref|YP_320548.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75699977|gb|ABA19653.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 99
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+ +T++DL K+FS+ ++ ++ T++ETG RG+ V+ S + A++ L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRVLKVNKARP 79
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 6 TGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKA--KRTSDFTPKIVE- 61
T + RG A + T E A K DG+ + G ++ + + +RT + + +
Sbjct: 149 TNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDD 208
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +IY GNL W + + L+ +F + R +ETG RG+ V FS + A
Sbjct: 209 GTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAA 268
Query: 121 LK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDS---AGLGT 170
L+ LD + GRP+++S A N S PS +A + TDS AG GT
Sbjct: 269 LESLDGVELEGRPLRLSLAE-----QNPPPGSPPSTAQAQQEETDSGAPAGAGT 317
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+++GNL + T E+L ++FS+ ++ + +K T RG+A V + + + A+++
Sbjct: 113 RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 172
Query: 124 -DQEVVRGRPVKISCAVPPKKG 144
D ++ GR +++ P+ G
Sbjct: 173 FDGALLGGRTARVNYPEVPRGG 194
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEMD-GLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A I F+ E + AL +G E+ G ++++ R S + + I++GNL
Sbjct: 209 AYIVFKEEESATDALKWNGHEIQAGFYIRVD--------RVSQHSKH--DHKRSIFVGNL 258
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+DI+E L+ F +C I ++R ++++G +G+ +V F S+ +ALKL+ ++
Sbjct: 259 PYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNGSTLQQ 318
Query: 131 RPVKISCAV 139
R +++ +V
Sbjct: 319 RKIRVKRSV 327
>gi|449296413|gb|EMC92433.1| hypothetical protein BAUCODRAFT_151826 [Baudoinia compniacensis
UAMH 10762]
Length = 465
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 8 KFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY---- 63
K +G A ++F +EG++ +AL M G + ++ K+ + + D PK VEG
Sbjct: 157 KNKGFAYVDFLSEGSLSKALGASEKLMAGRRVLVKNAKSFEGR--PDSKPKQVEGEGARD 214
Query: 64 -------NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
R+++GNL +D+T+EDL + FS ++ + T +++G+ +G+A V F +
Sbjct: 215 GKVKEPARRVFVGNLGFDVTKEDLAEHFSLAGEVEDIHMATFEDSGKCKGFAWVRFKEVD 274
Query: 116 SLSMALK 122
+ A++
Sbjct: 275 AAEAAVR 281
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 174 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 233
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 234 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 293
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 294 FELAGRPMRV 303
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++GN+ + T E+L++ F C I+ + NK G+ +G+A+++F D S+ A+ LD
Sbjct: 99 VFVGNVDYGATAEELEQHFHGCGSINRVTILCNKWDGQPKGFAYIEFGDKDSVQTAMALD 158
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
+ + RGR +K+ + GI+S
Sbjct: 159 ESLFRGRQIKVMLKRTNRPGISS 181
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 6 TGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKI---QPYKATKAK----------R 51
+G+ RG A + T EGA LDGS+ G LK+ QP + K R
Sbjct: 37 SGRSRGFAFVTMSTNEGAQSVIDRLDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDR 96
Query: 52 TSDFTPK-----IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRG 105
SD P+ +++ N+++IGNLSW + L ++FS+ + + +++TG+ RG
Sbjct: 97 RSDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRG 156
Query: 106 YAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCA 138
+ V S + +S A++ LD GR +++S A
Sbjct: 157 FGFVTMSAASEVSNAVQNLDGAEFEGREMRVSEA 190
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS-DSLSLSMALK 122
++Y+GNL W L ++ D + ++ ++++G RG+A V S + + S+ +
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 123 LDQEVVRGRPVKISCAVP-------PKKGINSKS--RSLPSNKRATSKVTDS------AG 167
LD GRP+K+S P P+ G N + RS ++ + +V D+
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGN 120
Query: 168 LGTSNDAD 175
L S DAD
Sbjct: 121 LSWSCDAD 128
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 37 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 95
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 96 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 155
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 156 GFELAGRPMRV 166
>gi|302498397|ref|XP_003011196.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
gi|291174745|gb|EFE30556.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
Length = 398
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 30/142 (21%)
Query: 3 FPDTGKFR-------GIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDF 55
PD+G R G A ++F ++ V+RA+AL + G + I K ++F
Sbjct: 125 IPDSGTKRKGVKQNKGFAYVDFTSQEIVERAIALSEELVGGRRVLI--------KDATNF 176
Query: 56 TPKIVE----------GYN----RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKET 100
++V+ G N +I++GNLS+D T+E L++ FS C IS++ T +++
Sbjct: 177 DGRVVKEADGDDLKAAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCGSISNIHVATFEDS 236
Query: 101 GEFRGYAHVDFSDSLSLSMALK 122
G+ +GYA V+F + S A++
Sbjct: 237 GKCKGYAWVEFESTQSSQAAVR 258
>gi|302653686|ref|XP_003018666.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
gi|291182325|gb|EFE38021.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
Length = 398
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 30/142 (21%)
Query: 3 FPDTGKFR-------GIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDF 55
PD+G R G A ++F ++ V+RA+AL + G + I K ++F
Sbjct: 125 IPDSGTKRKGVKQNKGFAYVDFTSQEIVERAIALSEELVGGRRVLI--------KDATNF 176
Query: 56 TPKIVE----------GYN----RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKET 100
++V+ G N +I++GNLS+D T+E L++ FS C IS++ T +++
Sbjct: 177 DGRVVKEADGDDLKTAGGNPPSTKIFVGNLSFDTTKEHLEEHFSPCGSISNIHVATFEDS 236
Query: 101 GEFRGYAHVDFSDSLSLSMALK 122
G+ +GYA V+F + S A++
Sbjct: 237 GKCKGYAWVEFESTQSSQAAVR 258
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I+IGN+ + + E+++ LF+DC +I+++ +K TG +G+A+++F+D S+ MA++ +
Sbjct: 93 IFIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMAMEKN 152
Query: 125 QEVVRGRPVKI 135
++R R +K+
Sbjct: 153 NALLRDRAIKV 163
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 185 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 243
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 244 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 303
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 304 GFELAGRPMRV 314
>gi|390331853|ref|XP_785806.3| PREDICTED: uncharacterized RNA-binding protein C365.04c-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G + + T ED+ K FS ++ S+R T+K+TG+ RG+ +++F ++ S L +
Sbjct: 72 LFVGQIPYSATTEDVTKHFSTAGELKSVRLATHKDTGKSRGFGYIEFKNNKSYMRGLAMH 131
Query: 125 QEVVRGRPVKISCAVP 140
++ GRP+ + P
Sbjct: 132 LSMLHGRPINVEITSP 147
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 37 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 95
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 96 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 155
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 156 GFELAGRPMRV 166
>gi|206901421|ref|YP_002251463.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
gi|206740524|gb|ACI19582.1| RNA-binding region RNP-1 [Dictyoglomus thermophilum H-6-12]
Length = 96
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLF-SDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GNLSW TEED+K LF + +I S+R T++ TG +G+A V+ ++ ++ + +
Sbjct: 5 LYVGNLSWQTTEEDIKGLFGGEGEIQSVRLITDRNTGRSKGFAFVETTEEVAQKLIDSYN 64
Query: 125 QEVVRGRPVKISCAVPPKK 143
GR + +S A P ++
Sbjct: 65 GYEFNGRKIVVSEARPKEE 83
>gi|320166878|gb|EFW43777.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 445
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Query: 64 NRIYIGNLSWDITEEDLKKLFS------DCKISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
+RI++G ++W E DL++ F+ +CKI + ++ TG +GY V FSD+ +
Sbjct: 133 HRIFVGGINWKGEESDLREFFAKLGTVVECKIIA-----DRVTGASKGYGFVSFSDAHTA 187
Query: 118 SMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSK 161
++ V G+P+ +S AV KG+++KS S+K A+S+
Sbjct: 188 EAVKQMQNLVYMGKPLHLSDAVRKPKGLDAKSDG--SDKGASSR 229
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIV 60
M P T K RG I FR V A A ++DG +++P +A + P+
Sbjct: 46 MRDPSTKKSRGFGFITFRRAHMVDDAQAARPHKVDGR--EVEPKRAVPREEAG--RPEAQ 101
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
++++G L D+ E DL+ FS I S+ T K+TG RG+A V++ D +
Sbjct: 102 ATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDK 161
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPS 154
+ +++G+ ++ A+ ++ N K P+
Sbjct: 162 IVLKRHHMLKGKRTEVKKALSKQEMENLKKDKRPA 196
>gi|41388912|gb|AAH65640.1| Zgc:77282 [Danio rerio]
Length = 263
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 47 YVGNLPFNTVQGDIDAIFRDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 106
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 107 LLGDRSLRVDIA 118
>gi|309384239|ref|NP_001184257.1| eukaryotic translation initiation factor 4H isoform 1 [Danio rerio]
Length = 262
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 47 YVGNLPFNTVQGDIDAIFRDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 106
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 107 LLGDRSLRVDIA 118
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 192 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 251
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 252 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 311
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 312 FELAGRPMRV 321
>gi|149236121|ref|XP_001523938.1| hypothetical protein LELG_04751 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452314|gb|EDK46570.1| hypothetical protein LELG_04751 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCK-----ISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+ Y+ NL WDITE+D+ + F D IS ++ ++ETG+ +G A+V F+ L
Sbjct: 88 KAYVNNLPWDITEQDVIRHFEDRMQANDIISDIKLPLDRETGQIKGVAYVTFTTRELLEE 147
Query: 120 ALKLDQEVVRGRPVKISCAVPPKKG 144
+L L GR + ++ A PP++G
Sbjct: 148 SLNLSMSEFNGRRMFVNVA-PPQQG 171
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 6 TGKFRGIAIINFRT----EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVE 61
TG+ RG A + T E +K LDGS G +K+ A R P E
Sbjct: 161 TGRSRGFAFVTMTTVQDCELVIKN---LDGSLYGGRTMKVN-----FADRPKPKLPLYPE 212
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+++++GNLSW +T E L + F C + R + ETG RGY V +S + A
Sbjct: 213 TEHKLFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEA 272
Query: 121 L-KLDQEVVRGRPVKISCAV 139
+ L+ + GR ++++ A+
Sbjct: 273 ISSLNGTELEGREIRVNLAL 292
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTGK RG A + E LDG E G L++ K K P E
Sbjct: 251 DTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKE-----PLYPETE 305
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNL+W +T E L + F + + R + ETG+ RGY V ++ + AL
Sbjct: 306 YKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALA 365
Query: 123 -LDQEVVRGRPVKISCA 138
+D + GR +++S A
Sbjct: 366 IMDNVELEGRTLRVSLA 382
>gi|452824970|gb|EME31969.1| nucleolar RNA-binding protein [Galdieria sulphuraria]
Length = 254
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F + AV AL+L+GS LKI D P + GY I++GNL
Sbjct: 85 AYVVFENKVAVDIALSLNGSVFQNKHLKID----------RDERPTVSVGYC-IFVGNLP 133
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEV-VRG 130
+D+ +E + ++FS + +R +K TG +G+ +V F +S+S+ A++++ V V+
Sbjct: 134 FDVEDEQVYEVFSKIGSVKYVRIVRDKHTGFGKGFGYVCFKESISVIAAVRMNGSVQVKD 193
Query: 131 RPVKI-SCAVPPKKGINSKS-RSLPSNKR 157
R V+I C K I S + +P N++
Sbjct: 194 RVVRIFRCKNSEKLNIQRTSQKYIPENRK 222
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 176 KGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 235
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI + + +TG +GY + FSDS AL +L+
Sbjct: 236 VGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG 295
Query: 126 EVVRGRPVKISCA 138
+ GRP+++ A
Sbjct: 296 FELAGRPMRVGHA 308
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 312 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPT 371
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++Y+G L ITE+ L ++F KI +L T+ +G +GYA+V F +
Sbjct: 372 NTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDG 430
Query: 118 SMAL-KLDQEVVRGRPVKISCAV 139
A+ +++ + GRP+K+ C+V
Sbjct: 431 KRAMEQMNGFELAGRPMKV-CSV 452
>gi|425780634|gb|EKV18640.1| Translation initiation factor 4B [Penicillium digitatum PHI26]
Length = 497
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T+ D+ + F+ C ++++R +K T +G+ +V+F L AL L
Sbjct: 86 HVGNLSFESTDADISEFFAGCGVTNVRLVEDKLTKAPKGFGYVEFETVEGLQKALDLSGS 145
Query: 127 VVRGRPVKISCAVPPKK 143
+GR ++ S A PPK+
Sbjct: 146 SFQGRSIRTSVAEPPKE 162
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKI----- 59
T + RG A + + K A+ + DGS++ G +++ + K PKI
Sbjct: 27 TDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVRVNFPEVPKGGERLVMGPKIRNNNR 86
Query: 60 --VEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
V+ ++IY GNL W ++ +DLK +F++ + S + +++G RG+ V F +
Sbjct: 87 DFVDSSHKIYAGNLGWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGFVTFETAQD 146
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
+ ALK V V+GR ++++ A
Sbjct: 147 VEAALKTMNGVEVQGRELRLNLA 169
>gi|260801976|ref|XP_002595870.1| hypothetical protein BRAFLDRAFT_123774 [Branchiostoma floridae]
gi|229281120|gb|EEN51882.1| hypothetical protein BRAFLDRAFT_123774 [Branchiostoma floridae]
Length = 325
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL ++ + DL ++F K+ S+R ++ET +F+G+ +V+F D SL AL D
Sbjct: 76 FVGNLPFETVQGDLDQIFRGLKVKSVRLVRDRETDKFKGFCYVEFEDVESLKEALTYDGA 135
Query: 127 VVRGRPVKISCA 138
+ R +++ A
Sbjct: 136 LFEDRNLRVDVA 147
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTP--KIVE 61
+G+ +G+ + F+ E +V A+ L G ++ G+ + Q +A K + R S+ + K
Sbjct: 211 SGRSKGVGYVEFKDESSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNSEASSGNKHSA 270
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + I E DL+ +F L F ETG RGY V F D
Sbjct: 271 PFHRLYVGNIHFSIDENDLQSVFE--PFGELEFVQLQKDETGRSRGYGFVQFRDPNQARE 328
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 329 ALEKMNGYDLGGRAIRV 345
>gi|425777998|gb|EKV16145.1| Translation initiation factor 4B [Penicillium digitatum Pd1]
Length = 481
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS++ T+ D+ + F+ C ++++R +K T +G+ +V+F L AL L
Sbjct: 86 HVGNLSFESTDADISEFFAGCGVTNVRLVEDKLTKAPKGFGYVEFETVEGLQKALDLSGS 145
Query: 127 VVRGRPVKISCAVPPKK 143
+GR ++ S A PPK+
Sbjct: 146 SFQGRSIRTSVAEPPKE 162
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 208 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 267
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 268 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 327
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 328 FELAGRPMRV 337
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + F+ E + +AL +G+++ DG +++ T ++ +++GNL
Sbjct: 234 AYVVFKKESSAAKALKRNGTQISDGFRIRVDLASETSSRDKRS-----------VFVGNL 282
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
++ I E +++ FSDC ++ ++R + TG +G+ +V F+++ ++ +ALKL+ + G
Sbjct: 283 AYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLNNSELMG 342
Query: 131 RPVKISCAV 139
R +++ +V
Sbjct: 343 RKLRVMRSV 351
>gi|406605166|emb|CCH43325.1| RNA-binding protein [Wickerhamomyces ciferrii]
Length = 380
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
D+ K +G A I+F T+ + + L +++G L I+ + + + + +
Sbjct: 151 DSKKIKGFAYIDFSTKNHQRSVINLSEQQLNGRNLLIKNSDSFEGRPNKEEAQLSKNPPS 210
Query: 65 RI-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
RI ++GNLS+D TEE L + F C ++ +R T +++G+ +G+A +DF D + ALK
Sbjct: 211 RILFVGNLSFDTTEEMLHRQFVHCGELIKIRMATFEDSGKCKGFAFLDFKDEEGPTKALK 270
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
++IGN+S+++T+ DL LF + + +R ++ TG+ RG+AH DF D S A+K L
Sbjct: 283 LFIGNMSFEMTDRDLSNLFRGIRNVIDVRVAIDRRTGQPRGFAHADFIDVKSAMEAMKVL 342
Query: 124 DQEVVRGRPVKI 135
++ + GR +++
Sbjct: 343 SEKEIYGRRLRV 354
>gi|359463045|ref|ZP_09251608.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 90
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNLS+D+TE+DL +F++ + S + T++ETG RG+ V+ D + A+ +L
Sbjct: 3 IYVGNLSYDVTEKDLSTVFAEYGTVKSAKLPTDRETGRIRGFGFVEMGDDTEEAKAIDEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
+ GR +K++ A P
Sbjct: 63 EGAEWMGRTLKVNKAKP 79
>gi|397603997|gb|EJK58580.1| hypothetical protein THAOC_21281 [Thalassiosira oceanica]
Length = 375
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+G R+++GNL + +TEE L C ++ +++ T+KETG+F G + V+ +S ++
Sbjct: 176 QGITRLFVGNLPFAVTEETLNAHMKGC-VTHIKWITDKETGKFYGSSFVEVRNSKDAAIC 234
Query: 121 LK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS--KVTDSAG 167
+K ++Q + GRP+KI+ A P + G + + P + + KV +S G
Sbjct: 235 VKEINQTQLMGRPIKINYA-PMRAG---EEKDWPPRSKVITGGKVANSGG 280
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 84/167 (50%), Gaps = 30/167 (17%)
Query: 1 MTFPDTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTP-- 57
+T +TGKF G + + R ++ A ++ +++ G +KI Y +A D+ P
Sbjct: 209 ITDKETGKFYGSSFVEVRNSKDAAICVKEINQTQLMGRPIKIN-YAPMRAGEEKDWPPRS 267
Query: 58 KIV------------------------EGYNRIYIGNLSWDITEEDLKKLFS--DCKISS 91
K++ +G ++++GNLS++I ++ + K F+ D ++ +
Sbjct: 268 KVITGGKVANSGGQAGGSGIKALKAKPDGCCKLFLGNLSYEIDDDGITKFFAGVDAELKA 327
Query: 92 LRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
+R+ ++++G+F+G DF ++ + A L+ + + GRP++I A
Sbjct: 328 VRWLFHQDSGDFKGCGFADFWNTEACEKAASLNGKTLLGRPIRIDWA 374
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 1 MTFPDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKI 59
+ + G +G + F + A +RA+ AL+ +G + +Q + R P
Sbjct: 941 LVLDNRGISKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAPT- 999
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
+YIGNL +++T+ DL +LF D + + +R ++ TG+ RG+AH +F + S
Sbjct: 1000 ----RTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAK 1055
Query: 119 MALK-LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
A+ L+ ++ GR +++ + + + +S P+ +
Sbjct: 1056 AAMAILENKLPYGRRLRLDYSKATSRTVVGTDQSAPAEQ 1094
>gi|317029450|ref|XP_001391615.2| pre-mRNA splicing factor (Prp24) [Aspergillus niger CBS 513.88]
Length = 1302
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T G A LDG+ + +GL L K + R D + EG I++
Sbjct: 951 RRFCYVQFKTAGEAYSATQLDGATVGNGLHLVA---KISDPTRRQDRQGPMYEG-REIHV 1006
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
NL W +E+D+++LF LRFGT K G +G+ +V FS +L
Sbjct: 1007 SNLDWKASEQDVEELF-------LRFGTVELVRIPRKVDGGSKGFCYVVFSSKEEAEASL 1059
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ R RP+ + + P
Sbjct: 1060 VMHEQQFRSRPLHVKLSTP 1078
>gi|308477111|ref|XP_003100770.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
gi|308264582|gb|EFP08535.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
Length = 393
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 12 IAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
I + + E +V+++L +G++++ +++ + K + D I++GNL
Sbjct: 202 IFYVKYNDEESVEKSLKYNGTKLEDHIVRVDKVGSKKKEFGKDLA---------IFVGNL 252
Query: 72 SWDITEEDLKKLFSDC--KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVR 129
+DITE+ L F++ ++ ++R +K TG +G+A V+F S+S+AL ++ +
Sbjct: 253 PFDITEDALITFFTEQIGQVEAVRIVRDKATGVGKGFAFVNFKQDSSVSLALSMETIKME 312
Query: 130 GRPVKISCAVPPKKG----INSKSRSLPSNKRATSKVT 163
R ++I+ + KKG I + + P KR ++++
Sbjct: 313 KRDLRITKVM--KKGHLTKIQTAKKRAPIAKRKQNEIS 348
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E L+ F++C KI+ + +K +G +GYA+++F+D S+ +A++LD
Sbjct: 143 IYVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKGYAYIEFADKSSVKVAMELD 202
Query: 125 QEVVRGRPVKISCAVPPKKGINSKSR 150
+ V R R +K+ GI++ R
Sbjct: 203 ESVFRDRVIKVLPKRTNMPGISTTDR 228
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK-AKRTSDFTPKIVEGY----- 63
+G+ I F +V A+AL G + + ++P +A K +++ P + G+
Sbjct: 9 KGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVTGGFIGPYS 68
Query: 64 ---NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
R+Y+GNL +++TE+ L+++F + ++ ++ ETG+ +GY V ++
Sbjct: 69 GGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDARA 128
Query: 120 ALK-LDQEVVRGRPVKISCA----------VPPKK---------GINSKSRSLPSNKRAT 159
A + L+ + GRP+K+S V P + +N++SR+L K
Sbjct: 129 AQQNLNGLELAGRPIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSRALLMQK--- 185
Query: 160 SKVTDSAGLGTSN 172
D +G GTSN
Sbjct: 186 ---LDRSGSGTSN 195
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+D+T EDLK FS +S ++ T+KETG RG+ VD S + A+ L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
+ GR +K++ A P
Sbjct: 63 NGAEWMGRQLKVNKARP 79
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 260
Query: 125 QEVVRGRPVKIS 136
+ + RGR +K+S
Sbjct: 261 ESLFRGRQIKVS 272
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T +DL+ FS C I+ + +K +G +GYA+++F++ S+ A+ +D
Sbjct: 95 VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMD 154
Query: 125 QEVVRGRPVKI 135
+ V RGR +K+
Sbjct: 155 ETVFRGRTIKV 165
>gi|309384237|ref|NP_991258.2| eukaryotic translation initiation factor 4H isoform 2 [Danio rerio]
Length = 256
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D + S+R +KET +F+G+ +V+F D SL AL D
Sbjct: 47 YVGNLPFNTVQGDIDAIFRDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGA 106
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 107 LLGDRSLRVDIA 118
>gi|170588275|ref|XP_001898899.1| RNA recognition motif. [Brugia malayi]
gi|158593112|gb|EDP31707.1| RNA recognition motif [Brugia malayi]
Length = 104
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
N I++GNL +D++E +L F K +S +R + +T +G+A V F ++ ++ +AL+
Sbjct: 4 NNIFVGNLPYDMSENELIAHFETSKNVSFVRIVRDPKTDNSKGFAFVAFKENAAIPLALQ 63
Query: 123 LDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSK 161
LD + + RP+++ K + SK+RS + R +K
Sbjct: 64 LDGSIFKSRPLRV-------KRVQSKTRSHQHSLRNIAK 95
>gi|417405453|gb|JAA49437.1| Putative rna-binding protein sart3 rrm superfamily [Desmodus
rotundus]
Length = 963
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD +DG + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALELDRKNVDGRPMFVSPCVDKSKNPDFKVFRYSTAL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + +R TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKK 143
S A +K+D ++ +K++ + PP++
Sbjct: 855 SQAVMKMDGMTIKENVIKVAISNPPQR 881
Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 66 IYIGNLSWDITEE--DLKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + + E L+ LF C +++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 706 VFVSNLPYSMEEPGVKLRPLFEACGEVAEVRPIFSNR--GDFRGYCYVEFKEEKSALQAL 763
Query: 122 KLDQEVVRGRPVKISCAVPPKKGINSK 148
+LD++ V GRP+ +S V K + K
Sbjct: 764 ELDRKNVDGRPMFVSPCVDKSKNPDFK 790
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 132 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 191
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 192 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 251
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 252 FELAGRPMRV 261
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 210 KGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 269
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI + + +TG +GY + FSDS AL +L+
Sbjct: 270 VGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG 329
Query: 126 EVVRGRPVKISCA 138
+ GRP+++ A
Sbjct: 330 FELAGRPMRVGHA 342
>gi|148298703|ref|NP_001091774.1| eukaryotic initiation factor 4B protein [Bombyx mori]
gi|111608109|gb|ABH10798.1| eukaryotic initiation factor 4B protein [Bombyx mori]
Length = 394
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
+I NL +D+ E + +LF+D K+++LR +E +G+ +VDF D +L AL +
Sbjct: 84 HISNLPYDVEESAIAELFADLKVTNLRL--PREGDRLKGHGYVDFEDRENLIEALNMPDL 141
Query: 127 VVRGRPVKISCAVPPKKGINSKSRS 151
+ GR V+I + P + + RS
Sbjct: 142 TIGGRRVRIEVSTPDDRRMGRSGRS 166
>gi|404494159|ref|YP_006718265.1| RNA-binding protein [Pelobacter carbinolicus DSM 2380]
gi|77546175|gb|ABA89737.1| RNA-binding protein [Pelobacter carbinolicus DSM 2380]
Length = 107
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
+Y+ NL +ITEE+L+KLFS K+S + G + ++G+FRGY +V S++ + + L
Sbjct: 5 LYVKNLPPEITEEELRKLFSVAGKVSYIHMGKDTKSGQFRGYGYVKMASEAEAKEAVVCL 64
Query: 124 DQEVVRGRPVKISCAVPPKKG 144
D + R + +S A P + G
Sbjct: 65 DGARINDRYISVSIAKPQQPG 85
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T +DL+ FS C I+ + +K +G +GYA+++F++ S+ A+ +D
Sbjct: 95 VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMD 154
Query: 125 QEVVRGRPVKI 135
+ V RGR +K+
Sbjct: 155 ETVFRGRTIKV 165
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 5 DTGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
DTGK RG A + E LDG E G L++ K K P E
Sbjct: 149 DTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKE-----PLYPETE 203
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++++GNL+W +T E L + F + + R + ETG+ RGY V ++ + AL
Sbjct: 204 YKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALA 263
Query: 123 -LDQEVVRGRPVKISCA 138
+D + GR +++S A
Sbjct: 264 IMDNVELEGRTLRVSLA 280
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+GNLS+D+TE+DL +F++ + S + T++ETG RG+ V+ SD + A+ +L
Sbjct: 3 IYVGNLSYDVTEQDLNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRTLKVNKAKP 79
>gi|409048423|gb|EKM57901.1| hypothetical protein PHACADRAFT_251826 [Phanerochaete carnosa
HHB-10118-sp]
Length = 431
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 38 FLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTN 97
FL +P + + P I ++GNL++D+TE DL++ F+ + S++ +
Sbjct: 27 FLSTRPDRGPPSHSLPTEPPYIA------FVGNLAFDLTEADLEEFFAGHQTKSVKIIKD 80
Query: 98 KETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKK 143
+E + +G+ +V+F+D L AL + + GR V+IS A PPK+
Sbjct: 81 RED-KPKGFGYVEFADLDGLKAALDMFGTSLAGRSVRISVAEPPKE 125
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Query: 32 SEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR-IYIGNLSWDITEEDLKKLFSDC-KI 89
+EM+ K++ +A+ + D T + NR I++GN+ + + E+L+ F C I
Sbjct: 28 AEMEAEAAKLREMQASLDQARQDLTEDKEDVDNRSIFVGNVDYSTSPEELQAHFQSCGSI 87
Query: 90 SSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKI 135
+ + +K TG+ +GYA+V+FS+ ++ AL L+ V +GR +K+
Sbjct: 88 NRVTILLDKFTGQPKGYAYVEFSEPQLVAQALVLNDSVFKGRNIKV 133
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFT--PKIVEGYNRIY 67
+G+ + + +V AL L+ ++ G+ + +QP A K + K+ G R+Y
Sbjct: 249 KGVGYVEYDVADSVPLALGLNNQKLLGVPIIVQPSHAEKNRSAGQNVTLQKVNSGPMRLY 308
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE L+ +F KI +++ + + +GY + F D+ AL +L+
Sbjct: 309 VGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQLNG 368
Query: 126 EVVRGRPVKIS 136
+ GRP+K++
Sbjct: 369 FELAGRPMKVN 379
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRPAAMANNLQKGSGGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 311 FELAGRPMRV 320
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 194 KGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 253
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI + + +TG +GY + FSDS AL +L+
Sbjct: 254 VGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG 313
Query: 126 EVVRGRPVKISCA 138
+ GRP+++ A
Sbjct: 314 FELAGRPMRVGHA 326
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|115402931|ref|XP_001217542.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189388|gb|EAU31088.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 364
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------PYKATKAKRTSDFTPKIVE 61
+G A ++F TE A+K AL L + G + I+ P K+ + + T
Sbjct: 120 KGFAYVDFSTEKAMKEALGLSEQLLSGRRVLIKDAKNFSGRPEKSQEEGQAGGSTASGHP 179
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
RI++GNL +D T+E L++ FS C ++ + T +++G+ +GY V F D + A
Sbjct: 180 PSKRIFVGNLGFDATKEILEEHFSQCGPLAHVHIATFQDSGKCKGYGWVTFEDLAAAEAA 239
Query: 121 LK 122
+K
Sbjct: 240 VK 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 66 IYIGNLSWDITEEDLKKLF------SDCKISSLRFGTNKET---GEFRGYAHVDFSDSLS 116
++IGNL++ IT++DL+K F SD I+ + E + +G+A+VDFS +
Sbjct: 73 VWIGNLAFSITKDDLRKFFIGHCSFSDATITRVHMPKGAEKHGKSQNKGFAYVDFSTEKA 132
Query: 117 LSMALKLDQEVVRGRPVKISCA 138
+ AL L ++++ GR V I A
Sbjct: 133 MKEALGLSEQLLSGRRVLIKDA 154
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQ---PYKATKAKRTSDFTPKIVE 61
TGK RG ++F T A K+A G ++DG ++I P R F +
Sbjct: 216 TGKSRGFGYVDFATAAAAKKAFEEGQGKQVDGRAIRIDLSTPKGDVSEDRAKKFNDQRSA 275
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ ++IGNLS+DITE+D+ FS+ ++S +R + ++G +G+ +V+F+ S + A
Sbjct: 276 PSSTLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAA 335
Query: 121 LK-LDQEVVRGRPVKISCAVP 140
+ + + + GRP+++ + P
Sbjct: 336 IDAMTGQELAGRPLRLDFSTP 356
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 45 KATKAKRTSDFTPKIVEGY-NRIYIGNLSWDITEEDLK---KLFSDCKISSLRFGTNKET 100
K K + + T ++ EG N++++G LSW++ + LK ++F +++S R ++ T
Sbjct: 159 KKAKTEEPAAATTELAEGETNQVWVGQLSWNVDNDWLKSEMEVFG--QVTSARVQLDRTT 216
Query: 101 GEFRGYAHVDFSDSLSLSMALKLDQ-EVVRGRPVKISCAVPPKKGINSKSRS 151
G+ RG+ +VDF+ + + A + Q + V GR ++I + P KG S+ R+
Sbjct: 217 GKSRGFGYVDFATAAAAKKAFEEGQGKQVDGRAIRIDLSTP--KGDVSEDRA 266
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNL++ +TEEDL+ FS +ISS T+K TG +G+ V+ S++ A+K L
Sbjct: 3 IYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFVEMSNNAEADAAIKGL 62
Query: 124 DQEVVRGRPVKISCAVP 140
++ ++GR +K++ A P
Sbjct: 63 NETPLKGRNMKVNEAKP 79
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEMD-GLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G++++ G +++ T + KR+ +++G
Sbjct: 244 AYVVFKDESAATKALQRNGAQIEEGFRIRVDLASETTSRDKRS-------------VFVG 290
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E L++ F DC I ++R N +TG RG+ +V F ++ ++ +ALKL+ +
Sbjct: 291 NLPYKVEEAALEEHFLDCGSIVAVRILRNPQTGVGRGFGYVLFENTDAVHLALKLNNSEL 350
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 351 MGRKLRVMRSV 361
>gi|403281745|ref|XP_003932338.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Saimiri boliviensis
boliviensis]
Length = 972
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 748 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 807
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 808 EKHKLFISGLPFSCTKEELEEI---CKAHGNVKDLRLVTNR-AGKPKGLAYVEYENESQA 863
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTSNDA 174
S A +K+D ++ +K++ + PP++ + K +R P + + + G G + A
Sbjct: 864 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMLSPQTYGARGKGRTQLA 923
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 690 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDVKLRPLFEACGEVVQIRP 746
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 747 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 804
Query: 150 RSLPSNK 156
SL +K
Sbjct: 805 TSLEKHK 811
>gi|221123418|ref|XP_002155675.1| PREDICTED: eukaryotic translation initiation factor 4H-like [Hydra
magnipapillata]
Length = 277
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL + + D+ +F+D K+ S+R ++ET +F+G+ +V+F D SL A++ D
Sbjct: 81 YVGNLPYQCVQGDIDAIFNDLKVKSVRLVRDRETDKFKGFCYVEFEDQKSLLSAIEFDGA 140
Query: 127 VVRGRPVKISCA 138
R ++++ A
Sbjct: 141 EFADRNLRVNVA 152
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 217 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 275
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 276 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 335
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 336 GFELAGRPMRV 346
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E+L+ F C ++ + +K +G +G+A+++FSD S+ +L LD
Sbjct: 201 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALD 260
Query: 125 QEVVRGRPVKIS 136
+ + RGR +K+S
Sbjct: 261 ESLFRGRQIKVS 272
>gi|350635663|gb|EHA24024.1| hypothetical protein ASPNIDRAFT_128739 [Aspergillus niger ATCC 1015]
Length = 1595
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T G A LDG+ + +GL L K + R D + EG I++
Sbjct: 951 RRFCYVQFKTAGEAYSATQLDGATVGNGLHLVA---KISDPTRRQDRQGPMYEG-REIHV 1006
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
NL W +E+D+++LF LRFGT K G +G+ +V FS +L
Sbjct: 1007 SNLDWKASEQDVEELF-------LRFGTVELVRIPRKVDGGSKGFCYVVFSSKEEAEASL 1059
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ R RP+ + + P
Sbjct: 1060 VMHEQQFRSRPLHVKLSTP 1078
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T +DL+ FS C I+ + +K +G +GYA+++F++ S+ A+ +D
Sbjct: 95 VYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMD 154
Query: 125 QEVVRGRPVKI 135
+ V RGR +K+
Sbjct: 155 ETVFRGRTIKV 165
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 1 MTFPDTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKI-------QPYKATKAKRT 52
MT +TGK +G + F++ +GA+K G E+DG +++ Q + T +R+
Sbjct: 33 MTDRETGKSKGFGFVEFKSVDGAIKAVEGKQGGEIDGRNVRLDFTEGRSQNNQRTPQQRS 92
Query: 53 SDFTPKI----VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYA 107
SD K E + +++GN+S+D E+ + ++FS+ I ++R T+++TG +G+
Sbjct: 93 SDRAGKFGDVPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFG 152
Query: 108 HVDFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
+V+ +A + L + GR +++ + P
Sbjct: 153 YVEMFSIDDAKVAFEALQGAEIAGRSIRLDYSTP 186
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF 111
+++G LSW++ EE L + F + +++S R T++ETG+ +G+ V+F
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEF 49
>gi|358399302|gb|EHK48645.1| hypothetical protein TRIATDRAFT_281461 [Trichoderma atroviride IMI
206040]
Length = 580
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNLS+D T E + F C + S+R ++E +G+ +V+F + L AL LD E
Sbjct: 82 HLGNLSYDATSESVSGFFEGCDVVSVRIIEDRELQRPKGFGYVEFGNVEGLKKALDLDGE 141
Query: 127 VVRGRPVKISCA 138
GR +KI A
Sbjct: 142 SFEGRMIKIKVA 153
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Query: 22 AVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR-IYIGNLSWDITEEDL 80
A+KR +A EM+ K++ +A+ + +D T E +R I++GN+ + + E+L
Sbjct: 35 AMKRRVA----EMEAEAAKLREMQASLDQARADLTEDKEEVDSRSIFVGNVDYSTSPEEL 90
Query: 81 KKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKIS 136
+ F C I+ + +K TG+ +GYA+V+F++ ++ AL L+ V +GR +K++
Sbjct: 91 QAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNDSVFKGRNIKVA 147
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 304 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPT 363
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++Y+G L ITE+ L ++F KI +L T+ +G +GYA+V F +
Sbjct: 364 NTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDG 422
Query: 118 SMAL-KLDQEVVRGRPVKISCAV 139
A+ +++ + GRP+K+ C+V
Sbjct: 423 KRAMEQMNGFELAGRPMKV-CSV 444
>gi|428320405|ref|YP_007118287.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
gi|428244085|gb|AFZ09871.1| RNP-1 like RNA-binding protein [Oscillatoria nigro-viridis PCC
7112]
Length = 95
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IYIGNLS+ TEEDLK +F++ + + T++ETG RG+A V+ + A+ +L
Sbjct: 3 IYIGNLSYRATEEDLKAVFAEYGTVKRVVLPTDRETGRMRGFAFVEMMEDAQEDAAIAEL 62
Query: 124 DQEVVRGRPVKISCAVPPKKG 144
D GRP++++ A P ++G
Sbjct: 63 DGAEWMGRPLRVNKAKPKEEG 83
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+Y+GN+ + T +DL+ FS C I+ + +K +G +GYA+++F++ S+ +A+ +D
Sbjct: 95 VYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDVAVAMD 154
Query: 125 QEVVRGRPVKI 135
+ V RGR +K+
Sbjct: 155 ETVFRGRTIKV 165
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+D+T+ DL + F + + S+ T++ETG RG+A V+ ++ + A++ L
Sbjct: 3 IYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIEAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRDLKVNKAKP 79
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 24/167 (14%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F + G FRG + F+ E + +AL LD ++G + + P + DF V
Sbjct: 704 FSNRGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVSP--CVDKSKNPDFK---VFR 758
Query: 63 Y------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDF- 111
Y +++++ L + T+E+L+++ CK + +R TN+ G+ +G A+V++
Sbjct: 759 YSTALEKHKLFVSGLPFSCTKEELEEI---CKAHGTVKDIRLVTNR-AGKPKGLAYVEYE 814
Query: 112 SDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S+S + LK+D V+ +K++ + PP++ + K P +RA
Sbjct: 815 SESQASQAVLKMDGMTVKENVIKVAISNPPQRKVPEK----PEARRA 857
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 66 IYIGNLSWDITEED--LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++ NL + ++E D L+ LF C +++ +R +N+ G+FRGY +V+F + S AL
Sbjct: 671 VFVSNLPYSMSEPDVQLRPLFEACGEVAEIRPIFSNR--GDFRGYCYVEFKEEKSALQAL 728
Query: 122 KLDQEVVRGRPVKISCAV 139
+LD++ V GRP+ +S V
Sbjct: 729 ELDRKNVEGRPMFVSPCV 746
>gi|358368612|dbj|GAA85228.1| pre-mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1303
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T G A LDG+ + +GL L K + R D + EG I++
Sbjct: 952 RRFCYVQFKTAGEAYSATQLDGATVGNGLHLVA---KISDPTRRQDRQGPMYEG-REIHV 1007
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
NL W +E+D+++LF LRFGT K G +G+ +V FS +L
Sbjct: 1008 SNLDWKASEQDVEELF-------LRFGTVELVRIPRKVDGGSKGFCYVVFSSKEEAEASL 1060
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ R RP+ + + P
Sbjct: 1061 VMHEQQFRSRPLHVKLSTP 1079
>gi|324519187|gb|ADY47308.1| Eukaryotic translation initiation factor 4H [Ascaris suum]
Length = 258
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 49 AKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAH 108
A R P EG + ++GNL +D + D+ +F D I R + E+ F+G+A+
Sbjct: 35 AARGRQHKPIPEEGPYKAFVGNLPFDSVQGDIDAIFKDLSIRETRMMRDHESDRFKGFAY 94
Query: 109 VDFSDSLSLSMALKLDQEVVRGRPVKISCAVPP 141
V+F+ L AL+LD R ++I A P
Sbjct: 95 VEFATREHLERALELDGCEFDNRRLRIDVADAP 127
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 31/159 (19%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + F+ E A +AL +G+++ DG +++ T ++ +++GNL
Sbjct: 275 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-----------VFVGNL 323
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+ + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ + G
Sbjct: 324 PYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMG 383
Query: 131 RPVKISCAV------------------PPKKGINSKSRS 151
R +++ +V PK+G+N SR+
Sbjct: 384 RKLRVMRSVNKEKLKQQNSNPRLKNVSKPKQGLNFTSRT 422
>gi|119195333|ref|XP_001248270.1| hypothetical protein CIMG_02041 [Coccidioides immitis RS]
gi|392862497|gb|EAS36853.2| RNA binding protein Rnp24 [Coccidioides immitis RS]
Length = 391
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 20/128 (15%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------PYKA------TKAKRTSDF 55
+G A I+F T GAV+RA+AL + G + I+ P K + +TS
Sbjct: 122 KGFAYIDFSTSGAVQRAIALSEQLLAGRAVLIKDANNFAGRPDKPRDDGGTSMGSKTSAN 181
Query: 56 TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS 114
P +I++GNL++DIT+E L++ + C IS + T +++G+ +GY V+F +
Sbjct: 182 PPS-----KKIFVGNLAFDITKEMLEEHYRPCGGISHVHIATFEDSGKCKGYGWVEFEEL 236
Query: 115 LSLSMALK 122
S + A++
Sbjct: 237 ESAAAAVR 244
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 66 IYIGNLSWDITEEDLKKL------FSDCKISSLRFGT-NKETGEF--RGYAHVDFSDSLS 116
I+IGNL + + ++DL+ F+ +I+ + K G+ +G+A++DFS S +
Sbjct: 75 IWIGNLPFSVAQDDLRNFLTTKGPFTPDEITRIHLPQGEKRNGKQLNKGFAYIDFSTSGA 134
Query: 117 LSMALKLDQEVVRGRPVKISCA 138
+ A+ L ++++ GR V I A
Sbjct: 135 VQRAIALSEQLLAGRAVLIKDA 156
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFL---KIQPYKATKAKRTSDFTPKIV 60
+T + RG + T E A K ++DG L K P A + F P
Sbjct: 179 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSF- 237
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
RIY+GNL W + + L +LFS+ K+ R ++ETG RG+ V + L
Sbjct: 238 ----RIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDD 293
Query: 120 AL-KLDQEVVRGRPVKISCAV--PPKKGI 145
A+ LD + + GR ++++ A PP++G
Sbjct: 294 AIAALDGQSLDGRALRVNVAEERPPRRGF 322
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 35/161 (21%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G+++ DG +++ T + KR+ +++G
Sbjct: 246 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-------------VFVG 292
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ +
Sbjct: 293 NLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSEL 352
Query: 129 RGRPVKISCAV------------------PPKKGINSKSRS 151
GR +++ +V PK+G+N SR+
Sbjct: 353 MGRKLRVMRSVNKEKLKQQNSNPRLKNVSKPKQGLNFTSRT 393
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG I T E A K + +++G FL + KA + P+ E
Sbjct: 129 ETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVN--KAAPRGSRPERPPQAFEPS 186
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GNL W + + L+++FS+ K+ R +++T RG+ V S L+ A+
Sbjct: 187 FRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIA 246
Query: 122 KLDQEVVRGRPVKISCAVP-PKKG 144
LD + + GR ++++ A P++G
Sbjct: 247 ALDGQSLDGRAIRVNVAEERPRRG 270
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY 63
+T + RG I T E A K + +++G FL + KA + P+ E
Sbjct: 169 ETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVN--KAAPRGSRPERPPQAFEPS 226
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
RIY+GNL W + + L+++FS+ K+ R +++T RG+ V S L+ A+
Sbjct: 227 FRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIA 286
Query: 122 KLDQEVVRGRPVKISCAVP-PKKG 144
LD + + GR ++++ A P++G
Sbjct: 287 ALDGQSLDGRAIRVNVAEERPRRG 310
>gi|189188072|ref|XP_001930375.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187971981|gb|EDU39480.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 447
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPK----------I 59
+G A ++F TE A+ +AL ++MDG L I+ K+ + + T +
Sbjct: 179 KGFAYVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGAKGAG 238
Query: 60 VEGY---NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
G+ R+++GNLS+D+T+EDL+ + ++ + T +++G+ +GYA V FSD
Sbjct: 239 KPGHPPNKRVFVGNLSFDVTKEDLEYHYGQAGEVEHIHMATFEDSGKCKGYAWVTFSDVE 298
Query: 116 SLSMAL 121
+ + A+
Sbjct: 299 AATCAV 304
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 190 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPT 249
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++Y+G L ITE+ L ++F KI +L T+ +G +GYA+V F +
Sbjct: 250 NTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDG 308
Query: 118 SMAL-KLDQEVVRGRPVKISCAV 139
A+ +++ + GRP+K+ C+V
Sbjct: 309 KRAMEQMNGFELAGRPMKV-CSV 330
>gi|297739447|emb|CBI29629.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 67 YIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+I NL + E L+ FSD ++++R +K TG+ RG A+VDFSD L+ A+ ++
Sbjct: 656 FISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNK 715
Query: 126 EVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVA 185
+++RG+ + I+ + P +KG + D G +D+ SG ++S+ A
Sbjct: 716 KMLRGKRLSIARSDPKQKG------------KGAGHSNDQTGTVGESDSKESGQISSSKA 763
Query: 186 ANA 188
A
Sbjct: 764 PQA 766
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 64 NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL- 121
NR+++G L W I+EEDLK++FS ++ R ++ETG RG+ + +++S S+ +
Sbjct: 5 NRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIA 64
Query: 122 KLDQEVVRGRPVKISCAVPPKK 143
LD + ++GR ++++ A+ ++
Sbjct: 65 ALDGQDLQGRTIRVNKAMTREQ 86
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD-------FTPK 58
T + +GI + F +V ALAL+G ++ G L IQP A + + ++ F P
Sbjct: 135 TRRSKGICYVEFWEIESVNLALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPT 194
Query: 59 IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
G ++Y+G L ITE+ L ++F KI +L T+ +G +GYA+V F +
Sbjct: 195 NTTGPLKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDG 253
Query: 118 SMAL-KLDQEVVRGRPVKISCAV 139
A+ +++ + GRP+K+ C+V
Sbjct: 254 KRAMEQMNGFELAGRPMKV-CSV 275
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+ IY+GN+ + T E+L+ F+ C +I + +K +G +GYA+++F+ + S+ A+
Sbjct: 148 HRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGYAYIEFAATTSVQAAV 207
Query: 122 KLDQEVVRGRPVKISCAVPPKK----GINSKSR 150
KLD+ V R R +K+ C PK+ GI+S R
Sbjct: 208 KLDESVFRDRVIKV-C---PKRTNFPGISSTDR 236
>gi|332241740|ref|XP_003270038.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Nomascus leucogenys]
Length = 963
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDVKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSD--FTPKIVEGYNRIY 67
+GIA + F+ ++ AL L G ++ G+ + +QP ++ K K + K G ++Y
Sbjct: 145 KGIAYVEFKDLESIPLALGLSGQKLLGVPIVVQPTQSEKNKIAAAQLSLQKAALGPTKLY 204
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L +ITEE +K +FS ++ ++ + G RGY + F+++ AL +L+
Sbjct: 205 VGSLHENITEEMIKGIFSPFGRVEQVQI-IKDDAGASRGYGFITFAEAECAKRALDQLNG 263
Query: 126 EVVRGRPVKIS 136
+ G+P+K++
Sbjct: 264 FEIAGKPIKLN 274
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 55 FTPKIVEGYNR-IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
PK E R +Y+GN+ + T E+L+ F C +++ + +K +G +GYA+++F
Sbjct: 36 LIPKTTEVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFE 95
Query: 113 DSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSKSR 150
+ S+ A++LD+ V RGR +K+ GI+S R
Sbjct: 96 EKSSVKAAVELDESVFRGRVIKVLPKRTNMPGISSTDR 133
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E++++ F C I+ + +K TG +GYA+V+F++ + AL +D
Sbjct: 55 IYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMD 114
Query: 125 QEVVRGRPVKIS 136
+ RGR +K++
Sbjct: 115 NSLFRGRLIKVT 126
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 235 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 293
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 294 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 353
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 354 GFELAGRPMRV 364
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 222 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPVRL 280
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L +ITE+ L+ + KI ++ + ETG +GY + FSDS AL +L+
Sbjct: 281 YVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLN 340
Query: 125 QEVVRGRPVKI 135
+ GRP++I
Sbjct: 341 GFELAGRPMRI 351
>gi|78355840|ref|YP_387289.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218245|gb|ABB37594.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 87
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GNLSW+ T++DL LF+D ++S R +++ETG RG+ V+ + + L+
Sbjct: 5 IYVGNLSWECTDQDLHALFADFGDVTSARVISDRETGRSRGFGFVEMDANGAAQAIDSLN 64
Query: 125 QEVVRGRPVKISCAVPPKK 143
+GR +K++ A P ++
Sbjct: 65 ASSFQGRNLKVNEAQPRER 83
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 6 TGKFRGIAIINFRTEGAVKRA-LALDGSEMDGLFLKIQPYKATKAKRTSDF--------- 55
TG+ RG + ++ V+ A +G E+DG L++ + + S F
Sbjct: 124 TGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGG 183
Query: 56 --TPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
+ NR+Y+GNL+W + ++ L+ LFS+ K+ + ++++G RG+ V +S
Sbjct: 184 SRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS 243
Query: 113 DSLSLSMALK-LDQEVVRGRPVKISCAV--PPKK 143
+ ++ A++ LD + GR +++S A PP++
Sbjct: 244 SAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 277
>gi|194379396|dbj|BAG63664.1| unnamed protein product [Homo sapiens]
Length = 527
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F + G FRG + F+ E + +AL +D ++G + + P + DF V
Sbjct: 303 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSP--CVDKSKNPDFK---VFR 357
Query: 63 Y------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFS 112
Y ++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++
Sbjct: 358 YSTSLEKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYE 413
Query: 113 DSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSK 148
+ S A +K+D ++ +K++ + PP++ + K
Sbjct: 414 NESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEK 450
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 80 LKKLFSDC-KISSLR-FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISC 137
L+ LF C ++ +R +N+ G+FRGY +V+F + S AL++D++ V GRP+ +S
Sbjct: 286 LRPLFEACGEVVQIRPIFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSP 343
Query: 138 AV 139
V
Sbjct: 344 CV 345
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 265
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 325
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 326 GFELAGRPMRV 336
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNLS 72
A + F+ + + ++AL +G ++GL L++ +DF V+ +++GNL
Sbjct: 164 AYVVFKEKSSAEKALESNGYLLEGLHLRVDK---------ADFQK--VDQKLCLFVGNLP 212
Query: 73 WDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGR 131
+ +++E+L+ F DC I +R +K TG +G+ +V F +S + + LKL + +GR
Sbjct: 213 FSLSDEELRSHFKDCGWIEDIRIIRDKATGLGKGFGYVRFKNSDGVMLGLKLHESDFKGR 272
Query: 132 PVKI 135
+++
Sbjct: 273 KLRV 276
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + F+ E A +AL +G+ + DG +++ +A TS + V ++GNL
Sbjct: 1316 AYVVFKEESAAMQALKRNGAHIADGFRIRVD-----RASETSSRDKRSV------FVGNL 1364
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+ + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ + G
Sbjct: 1365 PYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMG 1424
Query: 131 RPVKISCAV 139
R +++ +V
Sbjct: 1425 RKLRVMRSV 1433
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK--RTSDFTP--KIVE 61
+G+ +G+ + F+ E +V A+ L G + G+ + Q +A K + R ++ T
Sbjct: 210 SGRSKGVGYVEFKNEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNTESTSGHHHTA 269
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFG--TNKETGEFRGYAHVDFSDSLSLSM 119
++R+Y+GN+ + ITEEDL +F L F ETG +GYA V F++
Sbjct: 270 PFHRLYVGNVHFSITEEDLTNVFE--PFGELEFVQLQKDETGRSKGYAFVQFANPEQARD 327
Query: 120 AL-KLDQEVVRGRPVKI 135
AL K++ + GR +++
Sbjct: 328 ALEKMNGFELAGRAIRV 344
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 5 DTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI---QPYKATKAKRTSD------ 54
++G+ RG A + + A ++A LDG+E+ G +++ QP K +A R
Sbjct: 126 ESGRSRGFAFVTMASPDAAEKARRGLDGTELAGRAIRVNFPQP-KGERAPRAERGERSER 184
Query: 55 -------FTPK---IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEF 103
+TP+ NR+Y+GNL W + + L+ LF + ++ R ++++G
Sbjct: 185 SERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRS 244
Query: 104 RGYAHVDFSDSLSLSMAL-KLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNK 156
RG+A V S + A+ LD E + GR ++++ A + R P +
Sbjct: 245 RGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLATKSSGNREGRERRAPREQ 298
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
++Y+GNL+W +E L + FS ++ + ++E+G RG+A V + + A +
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRG 150
Query: 123 LDQEVVRGRPVKISCAVP 140
LD + GR ++++ P
Sbjct: 151 LDGTELAGRAIRVNFPQP 168
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 251 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 309
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 310 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 369
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 370 GFELAGRPMRV 380
>gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|81917559|sp|Q9JLI8.1|SART3_MOUSE RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=mSART-3; AltName:
Full=Tumor-rejection antigen SART3
gi|7637845|gb|AAF65228.1|AF172722_1 tumor-rejection antigen SART3 [Mus musculus]
gi|34980898|gb|AAH57156.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|148687992|gb|EDL19939.1| squamous cell carcinoma antigen recognized by T-cells 3, isoform
CRA_b [Mus musculus]
Length = 962
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F E + ++AL LD ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFGEEKSAQQALELDRKIVEGRPMFVSPCVDKSKNPDFKVFRYSTTL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS--RSLPSNKRATSKVTDSAGLGTS 171
S A +K+D +R +K++ + PP++ + K R+ P ++ + G G +
Sbjct: 855 SQAVMKMDGMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGKGRT 911
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + I E + L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVAHDSSKDSVTVFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+N+ G+FRGY +V+F + S AL+LD+++V GRP+ +S V K + K
Sbjct: 738 IFSNR--GDFRGYCYVEFGEEKSAQQALELDRKIVEGRPMFVSPCVDKSKNPDFK 790
>gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus]
Length = 962
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F E + ++AL LD ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFGEEKSAQQALELDRKIVEGRPMFVSPCVDKSKNPDFKVFRYSTTL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKS--RSLPSNKRATSKVTDSAGLGTS 171
S A +K+D +R +K++ + PP++ + K R+ P ++ + G G +
Sbjct: 855 SQAVMKMDGMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGKGRT 911
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK+ ++ +++ NL + I E + L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVAHDSSKDSVTVFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
+N+ G+FRGY +V+F + S AL+LD+++V GRP+ +S V K + K
Sbjct: 738 IFSNR--GDFRGYCYVEFGEEKSAQQALELDRKIVEGRPMFVSPCVDKSKNPDFK 790
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G+++ DG +++ T + KR+ +++G
Sbjct: 241 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-------------VFVG 287
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ +
Sbjct: 288 NLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSEL 347
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 348 MGRKLRVMRSV 358
>gi|1438951|gb|AAB04133.1| cutinase negative acting protein [Nectria haematococca mpVI]
Length = 507
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 6 TGKFRGIAIINFR-TEGAVKRALALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPK- 58
TG+ RG ++F EG K A+ G E+DG L + +P A A R +D +
Sbjct: 288 TGRSRGFGYVDFNDPEGCTKAYEAMQGFELDGRALNLDYANARPADANPAGRAADRAKRH 347
Query: 59 ---IVEGYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFS 112
+ + +++GNL D+ ++ +++ F + +++S+R T+ ++G +G+ +V F+
Sbjct: 348 GDTLSPESDTLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFN 405
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSD 113
++ G+LSW+I ++ L + F + + R T K TG RG+ +VDF+D
Sbjct: 253 LFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFND 301
>gi|434386342|ref|YP_007096953.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428017332|gb|AFY93426.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 95
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IYIGNLS+ TEEDLK +F D + + T++ETG RG+A V+ SD + A+ L
Sbjct: 3 IYIGNLSYQATEEDLKTVFEDYGTVKRVVLPTDRETGRMRGFAFVEMSDDANEDNAITNL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRSLKVNKARP 79
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|428183860|gb|EKX52717.1| hypothetical protein GUITHDRAFT_65053, partial [Guillardia theta
CCMP2712]
Length = 98
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G I++GNL + + E +++ L +DC I SLR+G ++ G F+G+ HV F+ S + MA
Sbjct: 24 GCRTIFMGNLPFSVKEGEVRALLADCGPIESLRWG--EQEGAFKGFVHVVFTHSEATDMA 81
Query: 121 LKLDQEVVRGRPVKI 135
+ +++GR +KI
Sbjct: 82 VNKSGSLLKGRRIKI 96
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G+++ DG +++ T + KR+ +++G
Sbjct: 241 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-------------VFVG 287
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ +
Sbjct: 288 NLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSEL 347
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 348 MGRKLRVMRSV 358
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 265
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 325
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 326 GFELAGRPMRV 336
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G+++ DG +++ T + KR+ +++G
Sbjct: 246 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-------------VFVG 292
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ +
Sbjct: 293 NLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSEL 352
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 353 MGRKLRVMRSV 363
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 7 GKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQ----PYKATKAKRTSDFTPKIVE 61
GK RG A + TE A K A+ LDG E++G L++ P P I
Sbjct: 56 GKSRGFAFVTLSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPRGGGGFGGGFGTRPSIPA 115
Query: 62 GYNRIYIGNLSWDITEEDLKKLFS------DCKISSLRFGTNKETGEFRGYAHVDFSDSL 115
+ ++ N+ W + ++ L++ FS DC+I T+ E+G RG V F+
Sbjct: 116 NPAKCFVANIPWSVDDQGLQEFFSSHGTVVDCRIL-----TDAESGRSRGIGFVTFATPD 170
Query: 116 SLSMALK-LDQEVVRGRPVKISCA 138
+ A+ LD + GR ++++ A
Sbjct: 171 EANNAISALDGAELGGRSIRVALA 194
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSL-RFGTNKETGEFRGYAHVDFSDSLSLSMAL-K 122
++Y+GN++W++ + L F+ I+ L ++ G+ RG+A V S + A+ K
Sbjct: 19 KLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRGFAFVTLSTEDAAKTAIEK 78
Query: 123 LDQEVVRGRPVKISCAVPPK 142
LD + GRP++++ P+
Sbjct: 79 LDGHELEGRPLRVNYPQVPR 98
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 222 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGSGGPVRL 280
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L +ITE+ L+ + KI ++ + ETG +GY + FSDS AL +L+
Sbjct: 281 YVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLN 340
Query: 125 QEVVRGRPVKI 135
+ GRP++I
Sbjct: 341 GFELAGRPMRI 351
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY- 63
T + RG A + + K A+ L DGS++ G +K+ + + + KI Y
Sbjct: 146 TDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQ 205
Query: 64 ------NRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
+++Y+ NLSW +T + L+ F+D S + ++ +G RG+ + FS + +
Sbjct: 206 GFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEA 265
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
+ AL EV + GRP++++ A
Sbjct: 266 MKSALDTMNEVELEGRPLRLNVA 288
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+Y+GNL + +T L ++F++ ++++ ++ T RG+A V A++L
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 124 -DQEVVRGRPVKISCAVPPKKG 144
D V GR VK++ P+ G
Sbjct: 170 FDGSQVGGRTVKVNFPEVPRGG 191
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALAL-DGSEMDGLFLKIQPYKATKAKRTSDFTPKI----- 59
T + RG A + + K A+ L DGS++ G +K+ + + + KI
Sbjct: 151 TDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQ 210
Query: 60 --VEGYNRIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLS 116
V+ +++Y+ NLSW +T + L+ F+D S + ++ +G RG+ + FS + +
Sbjct: 211 GFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEA 270
Query: 117 LSMALKLDQEV-VRGRPVKISCA 138
++ AL EV + GRP++++ A
Sbjct: 271 MNSALDTMNEVELEGRPLRLNVA 293
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKL 123
R+Y+GNL + +T L ++F++ ++++ ++ T RG+A V A++L
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 124 -DQEVVRGRPVKISCAVPPKKG 144
D V GR VK++ P+ G
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGG 196
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 311 FELAGRPMRV 320
>gi|427731667|ref|YP_007077904.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367586|gb|AFY50307.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 103
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
IY+GNLS+ +T++DL K+F++ ++ ++ T++ETG RG+ V+ S + A++ L
Sbjct: 3 IYVGNLSYSVTQDDLTKVFAEYGAVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR +K++ A P
Sbjct: 63 DGAEWMGRVMKVNKARP 79
>gi|242070893|ref|XP_002450723.1| hypothetical protein SORBIDRAFT_05g015666 [Sorghum bicolor]
gi|241936566|gb|EES09711.1| hypothetical protein SORBIDRAFT_05g015666 [Sorghum bicolor]
Length = 295
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 212 TCYECGEKGHLSSACLKKTADQTMVTGKVSDN---AGSRTGNFADNAGLGTTNVSDNAGL 268
TC++C ++GH C K +++M K+ + A ++ NA + + V D A L
Sbjct: 107 TCFKCKKEGHHVKGCTLKKEEKSM--SKIQEKKKMAHVKSSGKGHNAFVCSNKVDDQATL 164
Query: 269 SAVSGKIRRRTCYECGEKGHLSSACPKKTADQTNSTT 305
+ +R CYEC EKGH +CP K ++ +S+T
Sbjct: 165 PKNKTRRSKRKCYECKEKGHEIDSCPNKKSESLSSST 201
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 30/180 (16%)
Query: 128 VRGRPVK--ISCAVPPKKGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNVA 185
V+ +P K I+C K+G + K +L +++ SK+ + + + +S
Sbjct: 97 VQHQPKKTLITCFKCKKEGHHVKGCTLKKEEKSMSKIQEKKKM--------AHVKSSGKG 148
Query: 186 ANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACL-KKTADQTMVTGKVSDNA 244
NA ++ V + L + +R CYEC EKGH +C KK+ + T ++
Sbjct: 149 HNAFVCSNKVDDQATLPKNKTRRSKRKCYECKEKGHEIDSCPNKKSESLSSSTKRLFSKV 208
Query: 245 GSRTGNFADNAGLGTTNVSDNAGLSAVSGKIRRRTCYECGEKGHLSSACPKKTADQTNST 304
S+ N K + R CY C KGHLS CP + NS+
Sbjct: 209 ASKMQEKKAN-------------------KNKSRLCYTCRGKGHLSIDCPMGNTHKPNSS 249
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 6 TGKFRGIAIINFRTEGAVKRALA-LDGSEMDGLFLKIQPYKATKAKRTSDFT-------- 56
TG+ RG + T V+ A +G E++G L++ + S+F
Sbjct: 127 TGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRG 186
Query: 57 -------PK---IVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRG 105
P+ + NRIY+GNLSW + + L+ LFS+ K++ R ++ETG RG
Sbjct: 187 ENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRG 246
Query: 106 YAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCA 138
+ V ++ + ++ A++ LD + GR ++++ A
Sbjct: 247 FGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMA 280
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 222 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGSGGPVRL 280
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L +ITE+ L+ + KI ++ + ETG +GY + FSDS AL +L+
Sbjct: 281 YVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQLN 340
Query: 125 QEVVRGRPVKI 135
+ GRP++I
Sbjct: 341 GFELAGRPMRI 351
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 266
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 267 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 326
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 327 FELAGRPMRV 336
>gi|443715114|gb|ELU07265.1| hypothetical protein CAPTEDRAFT_220391 [Capitella teleta]
Length = 175
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++G LS D+TEEDLK F + + +R T+K+TGE R A + F+ + + L+L+
Sbjct: 55 VFVGKLSPDVTEEDLKLHFRQTRGVQQVRLLTDKDTGESRRCAFIQFTSQETHMLGLRLN 114
Query: 125 QEVVRGRPVKISCAVPPKK 143
++GR + + P KK
Sbjct: 115 ASELKGRKISVEFTKPGKK 133
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTS-----DFTPKI--VEG 62
+GI + FRT V RA+ L G+ + GL ++IQ +A + + + P + G
Sbjct: 57 KGIGYVEFRTVELVDRAIGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHG 116
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
++Y+G+L +++TE D+K++F ++ + + TG +GYA V + + MAL
Sbjct: 117 GMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMAL 176
Query: 122 K 122
+
Sbjct: 177 E 177
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GN+ + T E++++ F+ C I+ + +K TG +GYA+V+F++ + AL L+
Sbjct: 117 IYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTGP-KGYAYVEFAEPSLVQNALHLN 175
Query: 125 QEVVRGRPVKIS 136
+ V+RGR +K+S
Sbjct: 176 ESVLRGRQIKVS 187
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI-QPYKATKAKRTSDFTPKIVE 61
P T K +G A + + + AL ++G+ + G +K+ +P +A++ D + +
Sbjct: 208 PITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKVGRPSNMPQAQQVIDEIQEEAK 267
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS 112
YNRIYI ++ D+TEED+K +F I++ + +GYA +++
Sbjct: 268 NYNRIYIASIHPDLTEEDIKSVFEAFGAIATCKMSQGSSAHSHKGYAFIEYQ 319
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI-----QPYKATKAKRTSDFTPKI 59
T + RG ++F ++AL + G E+DG + + +P R F
Sbjct: 186 TDRSRGYGYVDFEDISYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFGDVP 245
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLS 118
E + +++GNLS+D ++L ++F +I S+R T+ ET + +G+ +V ++++
Sbjct: 246 SEPSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAK 305
Query: 119 MALK-LDQEVVRGRPVKISCAVP 140
AL L E + RPV++ + P
Sbjct: 306 KALDALQGESINDRPVRLDFSTP 328
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+++G LSW + +E LK F+ + S R + T RGY +VDF D ALK +
Sbjct: 151 LFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKALKEM 210
Query: 124 DQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA------TSKVTDSAGLGT-SNDAD 175
+ + GRP+ + + SK SN RA S+ +D+ LG S DAD
Sbjct: 211 QGKEIDGRPINVDMST-------SKPAGGASNDRAKKFGDVPSEPSDTLFLGNLSFDAD 262
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 26 ALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYNR-IYIGNLSWDITEEDLKKLF 84
A+ L +EM+ K++ +A+ + D + + NR I++GN+ + + E+L+ F
Sbjct: 88 AMKLRVAEMEAEAAKLREMQASLDQARQDLSEDKEDIDNRSIFVGNVDYSTSPEELQAHF 147
Query: 85 SDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKI 135
C I+ + +K TG+ +GYA+V+FS+ ++ AL L+ V +GR +K+
Sbjct: 148 QSCGSINRVTILLDKFTGQPKGYAYVEFSEPNLVAQALVLNDSVFKGRNIKV 199
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 206 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTGGPMRLY 265
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS A+ +L+
Sbjct: 266 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAMDQLNG 325
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 326 FELAGRPMRV 335
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
IY+GNLSW T+ D++ LFS ++ S+ +++ETG RG+ V+ D + + LD
Sbjct: 5 IYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEMEDDDAANAISALD 64
Query: 125 QEVVRGRPVKISCAVPPK 142
+ V GR ++++ A P K
Sbjct: 65 GKEVDGRSLRVNKAEPKK 82
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 195 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 254
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 255 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 314
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 315 FELAGRPMRV 324
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 265
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 325
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 326 GFELAGRPMRV 336
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G ++ G+ + +Q +A K + ++ K G ++
Sbjct: 212 KGIAYVEFCEIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAAMANNLQKGSSGPMHLF 271
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 272 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 331
Query: 126 EVVRGRPVKI 135
+ GRP+K+
Sbjct: 332 FELAGRPMKV 341
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPK--IVEGY 63
TG+ RG + F + A ++ALALD + + + P K K P +G
Sbjct: 724 TGRSRGYGFVEFSSPEAAQKALALDRQPVLNRPMYVSP-SVDKPKDGDGPAPSRYAQDGV 782
Query: 64 N--RIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
+ +++ NLS +DL F K+ +R T G F G A+V+F++ +A
Sbjct: 783 DPKTLFVRNLSSLCRRDDLVTTFEKFAKVVDVRM-TRHRDGRFTGRAYVEFANEEDAKLA 841
Query: 121 LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRATS 160
L D VVRG+P+ PP K S++ P+ A S
Sbjct: 842 LAADGTVVRGQPISAQVCNPPTKAAASET---PAQDNADS 878
Score = 44.7 bits (104), Expect = 0.062, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
+++ NL + TEE ++ F I +R K TG RGY V+FS + AL LD
Sbjct: 690 VFVSNLDFKATEEMIRSQFEQIGNIVDVRL-VRKPTGRSRGYGFVEFSSPEAAQKALALD 748
Query: 125 QEVVRGRPVKISCAV-PPKKG 144
++ V RP+ +S +V PK G
Sbjct: 749 RQPVLNRPMYVSPSVDKPKDG 769
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFS-DSLSLSMALKL 123
+YI NLS++I++EDL++LF+D +I+S + ++ETG RG+ V+ S D L+ +L
Sbjct: 3 LYISNLSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
+Q G+ + I+ A P
Sbjct: 63 NQASYDGKVINITEARP 79
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 265
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 325
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 326 GFELAGRPMRV 336
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSD-CKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
G +++GNLS+ + E +K+ F + ++ +RF T E G +G+AHV+F+ + ++ A
Sbjct: 471 GSKTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATF-EDGSSKGFAHVEFATTEAVHKA 529
Query: 121 LKLDQEVVRGRPVKISCA 138
+L+ + GRPV++ A
Sbjct: 530 RELNGHDLMGRPVRLDLA 547
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 2 TFPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ------PYKATKAKRTSDF 55
TF D G +G A + F T AV +A L+G ++ G +++ Y + S F
Sbjct: 506 TFED-GSSKGFAHVEFATTEAVHKARELNGHDLMGRPVRLDLARERGAYTPGSGRDNSSF 564
Query: 56 TPKIVEGYNRIYI----GNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVD 110
N +I +L D L+K F C +I+ + + ETG +G A+++
Sbjct: 565 KKPGQSSSNTAFIRGFDASLGEDQIRSSLQKHFGSCGEITRVSIPKDYETGASKGIAYME 624
Query: 111 FSDSLSLSMALKL 123
FSD SLS A +L
Sbjct: 625 FSDQSSLSKAFEL 637
>gi|134076092|emb|CAK39451.1| unnamed protein product [Aspergillus niger]
Length = 1132
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYI 68
R + F+T G A LDG+ + +GL L K + R D + EG I++
Sbjct: 781 RRFCYVQFKTAGEAYSATQLDGATVGNGLHLVA---KISDPTRRQDRQGPMYEG-REIHV 836
Query: 69 GNLSWDITEEDLKKLFSDCKISSLRFGT-------NKETGEFRGYAHVDFSDSLSLSMAL 121
NL W +E+D+++LF LRFGT K G +G+ +V FS +L
Sbjct: 837 SNLDWKASEQDVEELF-------LRFGTVELVRIPRKVDGGSKGFCYVVFSSKEEAEASL 889
Query: 122 KLDQEVVRGRPVKISCAVP 140
+ ++ R RP+ + + P
Sbjct: 890 VMHEQQFRSRPLHVKLSTP 908
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 265
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 266 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 325
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 326 GFELAGRPMRV 336
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 60 VEGYNRIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
+G +++GNLSW++ EE L + F + ++R T++ TG +G+ +V+F + +
Sbjct: 263 AQGSPNLFVGNLSWNVDEEWLGREFEEFGPKAVRIVTDRATGRSKGFGYVEFETVEAATA 322
Query: 120 ALKLDQEV-VRGRPVKISCAVPPKKGINSKSRS 151
AL + + RP+ + + P +G N + R+
Sbjct: 323 ALNAKKGTDLDNRPLNLDFSTPRPEGQNPRDRA 355
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 6 TGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN 64
TG+ +G + F T A AL A G+++D L + DF+ EG N
Sbjct: 303 TGRSKGFGYVEFETVEAATAALNAKKGTDLDNRPLNL------------DFSTPRPEGQN 350
Query: 65 R---------------------IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGE 102
+++GNLS+D T + + ++F + I+ + T E G
Sbjct: 351 PRDRASSRASQHGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGM 410
Query: 103 FRGYAHVDFSDSLSLSMALK-LDQEVVRGRPVKISCAVP 140
+G+ +V FS A + L + GR +++ A P
Sbjct: 411 PKGFGYVGFSSVEEAQGAFEALQGAELNGRSMRLDFAAP 449
>gi|168035835|ref|XP_001770414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678291|gb|EDQ64751.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 776
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 67 YIGNLSWDITEEDLKKLFS-DCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++ N+++++TEEDLK+ FS ++ +R + T RG A+VDF D SL+ A+ ++
Sbjct: 609 FLSNVAFEVTEEDLKEFFSPSSRVKEVRILRERGTARPRGLAYVDFEDEESLTAAIAKNK 668
Query: 126 EVVRGRPVKISCAVP 140
E ++GR + I+ + P
Sbjct: 669 EELKGRQLSIARSDP 683
>gi|255945137|ref|XP_002563336.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588071|emb|CAP86142.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQ--------PYKATKAKRTSDFTPKIVE 61
RG A ++F + +++ A+ L M G + I+ P K+ + +
Sbjct: 123 RGFAYVDFTDKKSLQEAIGLSEQLMTGRRVLIKDANNYEGRPEKSESQENAAGAAKSGHP 182
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
RI++GNLS+D+T+E+L++ F+ C ++++ T ++TG+ +GYA V+F D + A
Sbjct: 183 PSKRIFVGNLSFDVTKENLEENFAKCGTVTNVHMATFQDTGKCKGYAWVEFEDLAAAEAA 242
Query: 121 LK 122
++
Sbjct: 243 VR 244
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 17/86 (19%)
Query: 66 IYIGNLSWDITEEDLKKLF---SDCKISSL----------RFGTNKETGEFRGYAHVDFS 112
I+IGNLS+ +T+E+L+ F SD S++ RFG ++ RG+A+VDF+
Sbjct: 76 IWIGNLSFTVTKEELRMFFTVNSDISESNITRIHLPKGPERFGRSQN----RGFAYVDFT 131
Query: 113 DSLSLSMALKLDQEVVRGRPVKISCA 138
D SL A+ L ++++ GR V I A
Sbjct: 132 DKKSLQEAIGLSEQLMTGRRVLIKDA 157
>gi|449302074|gb|EMC98083.1| hypothetical protein BAUCODRAFT_22920 [Baudoinia compniacensis UAMH
10762]
Length = 613
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++DI++ ++ ++C+++S+R +K + +G+ +V+F+ L +AL
Sbjct: 138 HLGNLAYDISQSQVEDFLAECQVTSVRIVEDKLDHKPKGFGYVEFATLDGLKIALTKTDT 197
Query: 127 VVRGRPVKISCAVPPKKGINS 147
GR +KIS A PPK+ S
Sbjct: 198 PFMGRNIKISVAEPPKERAES 218
>gi|375146472|ref|YP_005008913.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060518|gb|AEV99509.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 95
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
IY+ NLS+D+ +EDLK F+ +++S + T++ETG RG+ V+ +D + A+ +L
Sbjct: 3 IYVSNLSFDVHDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D V R + +S A P
Sbjct: 63 DGSTVENRTISVSVAKP 79
>gi|330922100|ref|XP_003299696.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
gi|311326521|gb|EFQ92208.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
Length = 447
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKA-----TKAKRTSDFTPKIVEGY- 63
+G A ++F TE A+ +AL ++MDG L I+ K+ K K + + V+G
Sbjct: 179 KGFAYVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGVKGAG 238
Query: 64 -------NRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSL 115
R+++GNLS+D+T+EDL+ + ++ + T +++G+ +GYA V F+D
Sbjct: 239 KPGHPPNKRVFVGNLSFDVTKEDLEYHYGQAGEVEHIHMATFEDSGKCKGYAWVTFNDVE 298
Query: 116 SLSMAL 121
+ + A+
Sbjct: 299 AATCAV 304
>gi|156055150|ref|XP_001593499.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980]
gi|154702711|gb|EDO02450.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 488
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY---NRI 66
+G A ++F TE VK A+ L + G L I+ K+ + + ++EG +I
Sbjct: 232 KGFAYVDFATEEQVKMAVELSEQLLTGRRLLIKDNKSFEGRPEKKEA--VIEGKPPSKKI 289
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
++GNL +D TEE LK+ F C I + T +++G+ +GYA + F + + A+K
Sbjct: 290 FVGNLRFDATEEILKEHFEKCGAIEKIHVATFEDSGKCKGYAWIVFEEVSAAQSAVK 346
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 19/85 (22%)
Query: 66 IYIGNLSWDITEEDLKKLF---SDCK---ISSLRFG-------TNKETGEF------RGY 106
+++GNL W +++E+L+K F SD + I+ + NK +F +G+
Sbjct: 175 VWVGNLPWSVSKEELRKWFVEFSDLEEENITRIHMPGPNDGKPANKVEKKFGKPVHNKGF 234
Query: 107 AHVDFSDSLSLSMALKLDQEVVRGR 131
A+VDF+ + MA++L ++++ GR
Sbjct: 235 AYVDFATEEQVKMAVELSEQLLTGR 259
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 311 FELAGRPMRV 320
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 173 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 231
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 232 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 291
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 292 GFELAGRPMRV 302
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLD 124
I++GNL +D+ ++ + + FS C ++ +R + ++G +G+ +V F DS S+ +A++L+
Sbjct: 390 IFVGNLPFDVEDDSVYEHFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRLN 449
Query: 125 QEVVRGRPVKISCAVPPKKGINS 147
++ GR +++ AV +K N+
Sbjct: 450 EKTFSGRKIRVKRAVKKEKVKNT 472
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMD---GLFLKIQPYKATKAKRTSDFTPKIVEGYNRI 66
R + F++ A+ LDGS++ L +KI + R D I EG I
Sbjct: 955 RRFCYVQFKSAEDAHNAVQLDGSKVGSDLNLVVKI-----SDPSRKQDRHGPIYEG-REI 1008
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
++ N+ W +E+DLK LFS ++ ++R K G +G+ ++ FS + AL + +
Sbjct: 1009 HVSNIDWKASEDDLKDLFSKYGRVETVRI-PRKVDGGSKGFGYIVFSTKEEANAALAMHE 1067
Query: 126 EVVRGRPVKISCAVP 140
+ R RP+++ + P
Sbjct: 1068 QEFRSRPLQVRLSTP 1082
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|402887557|ref|XP_003907156.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Papio anubis]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDVKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|209527711|ref|ZP_03276207.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376007663|ref|ZP_09784855.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209491832|gb|EDZ92191.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375323983|emb|CCE20608.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 95
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDF-SDSLSLSMALKL 123
IY+GNLS+D+T+EDLK++F++ + + T++ETG+FRG+A V+ ++ + +L
Sbjct: 3 IYVGNLSYDVTDEDLKEVFAEYGTVKRVHLPTDRETGKFRGFAFVEMNTEEEEIHAIEEL 62
Query: 124 DQEVVRGRPVKISCAVP 140
D GR ++++ A P
Sbjct: 63 DGAEWMGREIRVNLARP 79
>gi|383873332|ref|NP_001244484.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|355692773|gb|EHH27376.1| hypothetical protein EGK_17559 [Macaca mulatta]
gi|355786497|gb|EHH66680.1| hypothetical protein EGM_03721 [Macaca fascicularis]
gi|380786253|gb|AFE65002.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|384950574|gb|AFI38892.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDVKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 10 RGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKIQ----PYKATKAKRTSDFTPKIVEGYN 64
RG A + + +RA+ DGSE+ G +K+ P + + S++ V+ +
Sbjct: 129 RGFAFVTMGSMEDAERAIRMFDGSEIGGRIMKVNFTAIPKRGKRLVMGSNYR-GFVDSPH 187
Query: 65 RIYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK- 122
+IY GNL W +T +DL+ F++ S + + +G RGY V F + + AL
Sbjct: 188 KIYAGNLGWGLTSQDLRDAFAEQPGFLSAKVIYERNSGRSRGYGFVSFETAEDVEAALNS 247
Query: 123 LDQEVVRGRPVKISCA 138
++ V+GRP++++ A
Sbjct: 248 MNGVEVQGRPLRLNLA 263
>gi|224076102|ref|XP_002191428.1| PREDICTED: eukaryotic translation initiation factor 4H isoform 1
[Taeniopygia guttata]
Length = 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
Y+GNL ++ + D+ +F D I S+R +KET +F+G+ +V+F + SL AL D
Sbjct: 43 YVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKETDKFKGFCYVEFDEVESLKEALTYDGA 102
Query: 127 VVRGRPVKISCA 138
++ R +++ A
Sbjct: 103 LLGDRSLRVDIA 114
>gi|119618222|gb|EAW97816.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_a [Homo sapiens]
Length = 575
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEG 62
F + G FRG + F+ E + +AL +D ++G + + P + DF V
Sbjct: 351 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSP--CVDKSKNPDFK---VFR 405
Query: 63 Y------NRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFS 112
Y ++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++
Sbjct: 406 YSTSLEKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYE 461
Query: 113 DSLSLSMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRS 151
+ S A +K+D ++ +K++ + PP++ + K +
Sbjct: 462 NESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPET 501
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 293 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRP 349
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAV 139
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V
Sbjct: 350 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCV 393
>gi|348584250|ref|XP_003477885.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cavia porcellus]
Length = 961
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL LD ++G + + P +K F
Sbjct: 738 FNNRGDFRGYCYVEFKDEKSALQALELDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTAL 797
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+ + CK + LR TN+ G+ +G A+V++ +
Sbjct: 798 EKHKLFISGLPFSCTKEELEDI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 853
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSK--SRSLPSNKRATSKVTDSAGLGTS 171
S A +K+D ++ +K++ + PP++ + K +R P ++ + G G +
Sbjct: 854 SQAVIKMDGMTIKENVIKVAISNPPQRKVPEKPEARKAPGGLMVPRQMYGARGKGRT 910
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLRF 94
Q KA KR PK+ ++ +++ NL++ + E + L+ LF C +++ +R
Sbjct: 680 QKEKAASLKRD---MPKVPHDSSKDSITVFVSNLAYSMGEPEVKLRPLFEACGEVAEIRP 736
Query: 95 GTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK 148
N G+FRGY +V+F D S AL+LD++ V GRP+ +S V K + K
Sbjct: 737 IFNNR-GDFRGYCYVEFKDEKSALQALELDRKSVEGRPMFVSPCVDKSKNPDFK 789
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 65 RIYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KL 123
R YIGNLS+ + E+ L++ F C + ++ T++ETG RG+ V F + A+ +
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEF 65
Query: 124 DQEVVRGRPVKISCAVP 140
D + GRP+K++ A P
Sbjct: 66 DGQDFDGRPMKVNQAQP 82
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + F+ E A +AL +G+++ DG +++ T ++ +++GNL
Sbjct: 275 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-----------VFVGNL 323
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
+ + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ + G
Sbjct: 324 PYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMG 383
Query: 131 RPVKISCAV 139
R +++ +V
Sbjct: 384 RKLRVMRSV 392
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRAL-ALDGSEMDGLFLKI-QPYKATKAKRTSDFTPKIVE 61
P T K +G A + + A + AL ++G + G +K+ +P +A+ D +
Sbjct: 155 PITQKHKGFAFVEYELPEAAQLALEQMNGVVIGGRNIKVGRPSNMPQAQPVIDEIMEESR 214
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
YNRI+I ++ D+TEED+K +F KI + G+ RGY +++ + S A
Sbjct: 215 HYNRIFIASVHPDLTEEDIKSVFEAFGKIKMCQLAQGPAPGKHRGYGFIEYETTQSAHDA 274
Query: 121 L-KLDQEVVRGRPVKISCAV-PPKKGINSKS--RSLPSN 155
+ ++ + G+ +++ A+ PP + + S R LP+
Sbjct: 275 IASMNMFDLGGQHLRVGRAITPPNSSVVTSSYLRMLPTQ 313
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEGYNRIYIGNL 71
A + F+ E A +AL +G+E+ G +++ A + S + + +++GNL
Sbjct: 215 AYVVFKEEHAAVKALKKNGTEVASGFHIRVD-----SASKNS-----LHDNKRSVFLGNL 264
Query: 72 SWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRG 130
++DI++ +++ F+DC + ++R ++++G +G+ +V F ++ ++ +ALKL+ + G
Sbjct: 265 AYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMG 324
Query: 131 RPVKI 135
R +++
Sbjct: 325 RKLRV 329
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 6 TGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAK------------RTS 53
+G+ +G+ + FR E +V +A+ + G + G+ + +Q +A K + R S
Sbjct: 149 SGRSKGVGYVEFRDEESVHKAINMTGQRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQS 208
Query: 54 DFTPKIVEGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHV 109
D P ++R+Y+GN+ +++TE+DL+++F ++ ++ +TG RGY V
Sbjct: 209 D-AP-----FHRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFV 259
>gi|156058226|ref|XP_001595036.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980]
gi|154700912|gb|EDO00651.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 577
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQ 125
+++GNLS+D T D+ + F C+ ++R +K + +G+ + +F L AL L+
Sbjct: 81 VHLGNLSFDATIGDVNEFFVGCECINVRIIEDKMEMKPKGFGYAEFGSLEGLKSALTLNG 140
Query: 126 EVVRGRPVKISCAVPPK-KGINSKSRSLPSNKRATSKVTDSAGLGTSNDADNSGAVTSNV 184
+GR ++IS A PPK +G R L R + D G G + G +S
Sbjct: 141 TQFQGRNIRISVADPPKDRGDRPDVRELGDWSR-KGPLPDLPGRGGERRTSDRGYQSSRF 199
Query: 185 AANAGSGTSDVTEHIDLSAVSGKIRRRTCYECGEKGHLSSACLKKTADQTMVTGKVSDNA 244
G S D GK+R +E KG LS ++ A + G+ N
Sbjct: 200 GDEGGERRSPREPESD-----GKVRDFGNWE--RKGPLSPLAQQERAPRE--GGRPRTND 250
Query: 245 GSRTGNFAD 253
G R F D
Sbjct: 251 GPRAEGFRD 259
>gi|71000677|ref|XP_755020.1| RNA binding protein Rnp24 [Aspergillus fumigatus Af293]
gi|66852657|gb|EAL92982.1| RNA binding protein Rnp24, putative [Aspergillus fumigatus Af293]
gi|159128034|gb|EDP53149.1| RNA binding protein Rnp24, putative [Aspergillus fumigatus A1163]
Length = 372
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDG---LFLKIQPYKATKAKRTSDFTPKIVEGYN-R 65
+G A I+ E AVK A+ L + G L + + K SD + + + R
Sbjct: 122 KGFAYIDLANEKAVKEAVGLSEQLLSGRRVLIKDAKNFDGRPKKSESDSAATVTKPPSKR 181
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
I++GNL +D+T+E L++ F C ++ + T +++G+ +GYA V+F D + A+K
Sbjct: 182 IFVGNLGFDVTKEVLEEHFGQCGTVAHVHVATFQDSGKCKGYAWVEFEDLAAAEAAVK 239
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 46 ATKAKRTSDFTPKIVEGYNRIYIGNLSWDITEEDLKKL------FSDCKISSLRFGTNKE 99
A +K+ D PK + I+IGNL++ +T++DL+K F+D I+ + +E
Sbjct: 56 AVPSKKQEDEAPKKRSDHG-IWIGNLAFSVTKDDLRKFLTSNCTFADTTITRIHLPKGQE 114
Query: 100 ---TGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCA 138
+ +G+A++D ++ ++ A+ L ++++ GR V I A
Sbjct: 115 KFGKAQNKGFAYIDLANEKAVKEAVGLSEQLLSGRRVLIKDA 156
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 5 DTGKFRGIAIINFRT-EGAVKRALALDGSEMDGLFLKIQPY--KATKAKRTSDFTPKIVE 61
+TG RG + T E A K + ++G L + + TK +R S +
Sbjct: 149 ETGNSRGFGFVTMGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPS----QAGS 204
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMA 120
N+IY+GNL W + L +LFS+ K+ R ++ETG RG+ V +S ++ A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 121 L-KLDQEVVRGRPVKISCAVPPKKGI 145
+ LD + GRP++++ A ++G
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRRRGF 290
>gi|344301518|gb|EGW31830.1| hypothetical protein SPAPADRAFT_62445 [Spathaspora passalidarum
NRRL Y-27907]
Length = 393
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 5 DTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGY- 63
D K +G A ++ + V +AL S ++G L I+ + + + + T + +
Sbjct: 166 DGNKIKGFAYVDVPSLAHVNSIVALSESVLNGRKLLIKNANSFEGRPAASPTSALSKNPP 225
Query: 64 NRI-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+RI ++GNLS+D TE++L++ F C I +R T ++TG+ +G+A +DF D + AL
Sbjct: 226 SRILFVGNLSFDTTEDNLQEHFRHCGDIVRIRMATFEDTGKCKGFAFIDFKDEEGPTTAL 285
Query: 122 K 122
K
Sbjct: 286 K 286
>gi|329957347|ref|ZP_08297867.1| hypothetical protein HMPREF9445_02745 [Bacteroides clarus YIT
12056]
gi|328523060|gb|EGF50163.1| hypothetical protein HMPREF9445_02745 [Bacteroides clarus YIT
12056]
Length = 82
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDS-LSLSMALKL 123
IY+GNL++ + E+DL+K+ D +SS++F ++ TG FRG A V+ DS + +L
Sbjct: 3 IYVGNLNYRVKEDDLQKVMEDYGTVSSVKFIMDRATGRFRGIAFVEMEDSAAAAKAIAEL 62
Query: 124 DQEVVRGRPVKISCAVPPK 142
D GR + + A PPK
Sbjct: 63 DGAEFFGRQMVVKEARPPK 81
>gi|296212815|ref|XP_002752998.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Callithrix jacchus]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCKI----SSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK+ LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKVHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRAT 159
S A +K+D ++ +K++ + PP++ + K P ++A+
Sbjct: 855 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEK----PEARKAS 893
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D LK LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDAKLKPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATK---------AKRTSDFTPKIV 60
+G+ I F +V A+AL G + G + ++P +A K A
Sbjct: 78 KGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYS 137
Query: 61 EGYNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSM 119
G R+Y+GNL ++ITE+ L+++F + ++ T+ ETG +G+ V F+
Sbjct: 138 GGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARA 197
Query: 120 ALKLDQEV-VRGRPVKISCA 138
A L+ ++ + GR +K+S
Sbjct: 198 AQSLNGQLDIAGRTIKVSVV 217
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 311 FELAGRPMRV 320
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR-----TSDFTPKIVEGYN 64
+GI + FRT V++ALAL G+ + GL + +Q ++ + K + + P + +
Sbjct: 162 KGIGYVEFRTIDHVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTASHG 221
Query: 65 RI-YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK 122
I Y+G+L +++TE D+K++F ++ + + TG +GYA V + S MAL+
Sbjct: 222 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALE 281
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
Query: 4 PDTGKFRGIAIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKATKAKRTSDFTPKIVEG 62
P+ G + F+ E A ++AL +G+++ +G ++++ SD TP + G
Sbjct: 227 PEQKSINGYVV--FKEESAAEKALKRNGAQIAEGFPVRVE--------LISD-TP--LRG 273
Query: 63 YNRIYIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL 121
+++GNL + I E +++ FSDC + +++ NK TG +G +V F ++ ++ +AL
Sbjct: 274 KRSVFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLAL 333
Query: 122 KLDQEVVRGRPVKI 135
+L+ + GR +++
Sbjct: 334 RLNNSELMGRKLRV 347
>gi|426374017|ref|XP_004053879.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Gorilla gorilla gorilla]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENIIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen recognized by T-cells 3 [Homo
sapiens]
gi|74762140|sp|Q15020.1|SART3_HUMAN RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=hSART-3; AltName:
Full=Tat-interacting protein of 110 kDa; Short=Tip110
gi|961450|dbj|BAA09929.1| KIAA0156 [Homo sapiens]
gi|4996282|dbj|BAA78384.1| squamous cell carcinoma antigen SART-3 [Homo sapiens]
gi|62739971|gb|AAH93784.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|85567456|gb|AAI11984.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|119618223|gb|EAW97817.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_b [Homo sapiens]
gi|168278527|dbj|BAG11143.1| squamous cell carcinoma antigen recognized by T-cells 3 [synthetic
construct]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENIIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 13 AIINFRTEGAVKRALALDGSEM-DGLFLKIQPYKAT--KAKRTSDFTPKIVEGYNRIYIG 69
A + F+ E A +AL +G+++ DG +++ T + KR+ +++G
Sbjct: 1631 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS-------------VFVG 1677
Query: 70 NLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVV 128
NL + + E ++K F DC I ++R +K TG +G+ +V F ++ S+ +ALKL+ +
Sbjct: 1678 NLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSEL 1737
Query: 129 RGRPVKISCAV 139
GR +++ +V
Sbjct: 1738 MGRKLRVMRSV 1748
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKR--TSDFTPKIVEGYNRIY 67
+GIA + F +V A+ L G + G+ + +Q +A K + ++ K G R+Y
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSGGPMRLY 250
Query: 68 IGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLDQ 125
+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 251 VGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
Query: 126 EVVRGRPVKI 135
+ GRP+++
Sbjct: 311 FELAGRPMRV 320
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 10 RGIAIINFRTEGAVKRALALDGSEMDGLFLKIQPYKATKAKRTSDFTPKIVEGYN---RI 66
+GIA + F +V A+ L G + G+ + +Q +A K R + + +G R+
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEK-NRLAAMANNLQKGNGGPMRL 249
Query: 67 YIGNLSWDITEEDLKKLFSDC-KISSLRFGTNKETGEFRGYAHVDFSDSLSLSMAL-KLD 124
Y+G+L ++ITE+ L+ +F KI ++ + +TG +GY + FSDS AL +L+
Sbjct: 250 YVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLN 309
Query: 125 QEVVRGRPVKI 135
+ GRP+++
Sbjct: 310 GFELAGRPMRV 320
>gi|197101013|ref|NP_001124858.1| squamous cell carcinoma antigen recognized by T-cells 3 [Pongo
abelii]
gi|75070943|sp|Q5REG1.1|SART3_PONAB RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3
gi|55726145|emb|CAH89846.1| hypothetical protein [Pongo abelii]
Length = 981
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 757 FSNRGDFRGYRYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 816
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 817 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 872
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 873 SQAVMKMDGMTIKENVIKVAISNPPQRKVPEK----PETRKA 910
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 699 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRP 755
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 756 IFSNR--GDFRGYRYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 813
Query: 150 RSLPSNK 156
SL +K
Sbjct: 814 TSLEKHK 820
>gi|397525223|ref|XP_003832576.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan paniscus]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENIIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|158261441|dbj|BAF82898.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENIIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|114646770|ref|XP_001163755.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 3 [Pan troglodytes]
gi|410209428|gb|JAA01933.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410253528|gb|JAA14731.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410290636|gb|JAA23918.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410350455|gb|JAA41831.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 3 FPDTGKFRGIAIINFRTEGAVKRALALDGSEMDGLFLKIQP-YKATKAKRTSDFTPKIVE 61
F + G FRG + F+ E + +AL +D ++G + + P +K F
Sbjct: 739 FSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSL 798
Query: 62 GYNRIYIGNLSWDITEEDLKKLFSDCK----ISSLRFGTNKETGEFRGYAHVDFSDSLSL 117
++++I L + T+E+L+++ CK + LR TN+ G+ +G A+V++ +
Sbjct: 799 EKHKLFISGLPFSCTKEELEEI---CKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQA 854
Query: 118 SMA-LKLDQEVVRGRPVKISCAVPPKKGINSKSRSLPSNKRA 158
S A +K+D ++ +K++ + PP++ + K P ++A
Sbjct: 855 SQAVMKMDGMTIKENIIKVAISNPPQRKVPEK----PETRKA 892
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 42 QPYKATKAKRTSDFTPKIVEGYNR----IYIGNLSWDITEED--LKKLFSDC-KISSLR- 93
Q KA KR PK++ ++ +++ NL + + E D L+ LF C ++ +R
Sbjct: 681 QKEKAASLKRD---MPKVLHDSSKDSITVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRP 737
Query: 94 FGTNKETGEFRGYAHVDFSDSLSLSMALKLDQEVVRGRPVKISCAVPPKKGINSK----S 149
+N+ G+FRGY +V+F + S AL++D++ V GRP+ +S V K + K S
Sbjct: 738 IFSNR--GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVSPCVDKSKNPDFKVFRYS 795
Query: 150 RSLPSNK 156
SL +K
Sbjct: 796 TSLEKHK 802
>gi|46111387|ref|XP_382751.1| hypothetical protein FG02575.1 [Gibberella zeae PH-1]
Length = 554
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 67 YIGNLSWDITEEDLKKLFSDCKISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALKLDQE 126
++GNL++D+T + + + C + ++R ++E +G+ +V+F L AL LD E
Sbjct: 87 HLGNLAYDVTNDAVADFLTGCGVVNVRLIEDRELQRPKGFGYVEFETLDGLKQALALDGE 146
Query: 127 VVRGRPVKISCAVPPKKGINSKSRSL 152
GR +KI A PP+ G + S+
Sbjct: 147 SFGGRMIKIKVADPPRGGDPGRGDSI 172
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 66 IYIGNLSWDITEEDLKKLFSDCK-ISSLRFGTNKETGEFRGYAHVDFSDSLSLSMALK-L 123
+YIGNL +++T+ DL +LF D + + +R ++ TG+ RG+AH +F + S A+ L
Sbjct: 288 LYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAIL 347
Query: 124 DQEVVRGRPVKI 135
+ ++ GR +++
Sbjct: 348 ENKLPYGRRLRL 359
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,606,694,177
Number of Sequences: 23463169
Number of extensions: 186104479
Number of successful extensions: 652827
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 10359
Number of HSP's that attempted gapping in prelim test: 632056
Number of HSP's gapped (non-prelim): 23370
length of query: 311
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 169
effective length of database: 9,027,425,369
effective search space: 1525634887361
effective search space used: 1525634887361
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)