BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021490
(311 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 151/252 (59%), Gaps = 5/252 (1%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K+L QG +F EV M+S+ H NL+ L G+C +RLLVY YM GSV
Sbjct: 65 VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + + PLDW R +IA G+ARGL YLHD P +I+RD+K +NILLD + +
Sbjct: 125 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 184
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV 190
DFGLAKL D HV V GT G+ APEY TG+ + K+DV+ +GV+LLE+++G++A
Sbjct: 185 DFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
Query: 191 DTSKAAAEQS--LVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPD 248
D ++ A + L+ W + L +++ +L+ D +LQG Y Q + VA +C P
Sbjct: 244 DLARLANDDDVMLLDWVKGLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPM 302
Query: 249 MRPVIADVVTAL 260
RP +++VV L
Sbjct: 303 ERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 150/252 (59%), Gaps = 5/252 (1%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K+L QG +F EV M+S+ H NL+ L G+C +RLLVY YM GSV
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + + PLDW R +IA G+ARGL YLHD P +I+RD+K +NILLD + +
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV 190
DFGLAKL D HV V G G+ APEY TG+ + K+DV+ +GV+LLE+++G++A
Sbjct: 177 DFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Query: 191 DTSKAAAEQS--LVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPD 248
D ++ A + L+ W + L +++ +L+ D +LQG Y Q + VA +C P
Sbjct: 236 DLARLANDDDVMLLDWVKGLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPM 294
Query: 249 MRPVIADVVTAL 260
RP +++VV L
Sbjct: 295 ERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 141/251 (56%), Gaps = 4/251 (1%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K+ QG EF E+ LS HP+LV+LIG+C + ++ +L+Y+YM G+++ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L+ + W R++I GAARGL YLH +A +I+RD+K NILLD + PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG++K G D TH+ V GT GY PEY G+LT KSDVYSFGVVL E+L R A+
Sbjct: 183 FGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
S +L WA + + I DP L + P + A C+ + RP
Sbjct: 243 QSLPREMVNLAEWAVE-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 252 VIADVVTALAY 262
+ DV+ L Y
Sbjct: 302 SMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K+ QG EF E+ LS HP+LV+LIG+C + ++ +L+Y+YM G+++ H
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH 125
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L+ + W R++I GAARGL YLH +A +I+RD+K NILLD + PK++D
Sbjct: 126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG++K G TH+ V GT GY PEY G+LT KSDVYSFGVVL E+L R A+
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
S +L WA + + I DP L + P + A C+ + RP
Sbjct: 243 QSLPREMVNLAEWAVE-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 252 VIADVVTALAY 262
+ DV+ L Y
Sbjct: 302 SMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 140/249 (56%), Gaps = 12/249 (4%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K+L D + ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ D L L G PL W+ R KIA GAA G+ +LH+ I+RD+K +NILLD +
Sbjct: 117 LLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
K+SDFGLA+ T + +R++GT Y APE A G++T KSD+YSFGVVLLEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQP 247
AVD + Q L+ + + D ++ +VA+ C+HE+
Sbjct: 232 PAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKK 288
Query: 248 DMRPVIADV 256
+ RP I V
Sbjct: 289 NKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 139/249 (55%), Gaps = 12/249 (4%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K+L D + ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ D L L G PL W+ R KIA GAA G+ +LH+ I+RD+K +NILLD +
Sbjct: 117 LLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
K+SDFGLA+ T + R++GT Y APE A G++T KSD+YSFGVVLLEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 231
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQP 247
AVD + Q L+ + + D ++ +VA+ C+HE+
Sbjct: 232 PAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKK 288
Query: 248 DMRPVIADV 256
+ RP I V
Sbjct: 289 NKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 138/249 (55%), Gaps = 12/249 (4%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K+L D + ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS
Sbjct: 51 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 110
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ D L L G PL W+ R KIA GAA G+ +LH+ I+RD+K +NILLD +
Sbjct: 111 LLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 166
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
K+SDFGLA+ + R++GT Y APE A G++T KSD+YSFGVVLLEI++G
Sbjct: 167 KISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL 225
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQP 247
AVD + Q L+ + + D ++ +VA+ C+HE+
Sbjct: 226 PAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKK 282
Query: 248 DMRPVIADV 256
+ RP I V
Sbjct: 283 NKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 135/249 (54%), Gaps = 12/249 (4%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K+L D + ++F E+ + + H NLV L+G+ +DGD LVY Y P GS
Sbjct: 48 VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGS 107
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ D L L G PL W+ R KIA GAA G+ +LH+ I+RD+K +NILLD +
Sbjct: 108 LLDRLSCLD-GTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
K+SDFGLA+ +R++GT Y APE A G++T KSD+YSFGVVLLEI++G
Sbjct: 164 KISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGL 222
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQP 247
AVD + Q L+ + + D + +VA+ C+HE+
Sbjct: 223 PAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKK 279
Query: 248 DMRPVIADV 256
+ RP I V
Sbjct: 280 NKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
Query: 11 DVAIKQLDRNGVQGNR--EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L R EFL EV ++ L HPN+V +G +V EY+ GS+
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
LH S ++ LD R+ +A A+G+ YLH++ PP+++RDLK N+L+D+ Y K
Sbjct: 122 YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVK 179
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ DFGL++L S GT + APE + KSDVYSFGV+L E+
Sbjct: 180 VCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 8/176 (4%)
Query: 11 DVAIKQLDRNGVQGNR--EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L R EFL EV ++ L HPN+V +G +V EY+ GS+
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
LH S ++ LD R+ +A A+G+ YLH++ PP+++R+LK N+L+D+ Y K
Sbjct: 122 YRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVK 179
Query: 129 LSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ DFGL++L +T +S++ GT + APE + KSDVYSFGV+L E+
Sbjct: 180 VCDFGLSRLKA---STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+DVAIKQ++ + + F+VE+ LS ++HPN+V L G C + LV EY GS+
Sbjct: 32 KDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLY 87
Query: 70 DHLHDLSPGKKPLDWNTR---MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ LH G +PL + T M ++G+ YLH +I+RDLK N+LL G
Sbjct: 88 NVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 143
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
K+ DFG A TH+ T G+ + APE + + K DV+S+G++L E+++
Sbjct: 144 VLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
Query: 186 GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHE 245
RK D A + + WA + TR LI + P+ ++ C +
Sbjct: 199 RRKPFDEIGGPAFR--IMWA---VHNGTRPPLIKN-------LPKPIE---SLMTRCWSK 243
Query: 246 QPDMRPVIADVVTALAYLASQKYESDAEKVQSPC---LDPGTPTRTK 289
P RP + ++V + +L + + E +Q PC L PG R +
Sbjct: 244 DPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPCQHSLPPGEDGRVE 289
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+DVAIKQ++ + + F+VE+ LS ++HPN+V L G C + LV EY GS+
Sbjct: 33 KDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLY 88
Query: 70 DHLHDLSPGKKPLDWNTR---MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ LH G +PL + T M ++G+ YLH +I+RDLK N+LL G
Sbjct: 89 NVLH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 144
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
K+ DFG A TH+ T G+ + APE + + K DV+S+G++L E+++
Sbjct: 145 VLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
Query: 186 GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHE 245
RK D A + + WA + TR LI + P+ ++ C +
Sbjct: 200 RRKPFDEIGGPAFR--IMWA---VHNGTRPPLIKN-------LPKPIE---SLMTRCWSK 244
Query: 246 QPDMRPVIADVVTALAYLASQKYESDAEKVQSPC---LDPGTPTRTK 289
P RP + ++V + +L + + E +Q PC L PG R +
Sbjct: 245 DPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPCQHSLPPGEDGRVE 290
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 39/266 (14%)
Query: 12 VAIKQL---DRNG----VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
VAIK L D G ++ +EF EV ++S L+HPN+V L G + + +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL--- 121
G D H L P+ W+ ++++ A G+EY+ ++ PP+++RDL+ NI L
Sbjct: 105 CG---DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSL 160
Query: 122 --DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AKTGQLTLKSDVYSFG 177
+ K++DFGL++ + H + ++G + + APE A+ T K+D YSF
Sbjct: 161 DENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 178 VVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALA 237
++L IL+G D ++ + F + R + P + PPR
Sbjct: 216 MILYTILTGEGPFDE---------YSYGKIKFINMIREEGLR-PTIPEDCPPR----LRN 261
Query: 238 VAAMCVHEQPDMRPVIADVVTALAYL 263
V +C P RP + +V L+ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 39/266 (14%)
Query: 12 VAIKQL---DRNG----VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
VAIK L D G ++ +EF EV ++S L+HPN+V L G + + +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL--- 121
G D H L P+ W+ ++++ A G+EY+ ++ PP+++RDL+ NI L
Sbjct: 105 CG---DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSL 160
Query: 122 --DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AKTGQLTLKSDVYSFG 177
+ K++DFG ++ + H + ++G + + APE A+ T K+D YSF
Sbjct: 161 DENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 178 VVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALA 237
++L IL+G D ++ + F + R + P + PPR
Sbjct: 216 MILYTILTGEGPFDE---------YSYGKIKFINMIREEGLR-PTIPEDCPPR----LRN 261
Query: 238 VAAMCVHEQPDMRPVIADVVTALAYL 263
V +C P RP + +V L+ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 39/266 (14%)
Query: 12 VAIKQL---DRNG----VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
VAIK L D G ++ +EF EV ++S L+HPN+V L G + + +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL--- 121
G D H L P+ W+ ++++ A G+EY+ ++ PP+++RDL+ NI L
Sbjct: 105 CG---DLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSL 160
Query: 122 --DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY--AKTGQLTLKSDVYSFG 177
+ K++DF L++ + H + ++G + + APE A+ T K+D YSF
Sbjct: 161 DENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 178 VVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALA 237
++L IL+G D ++ + F + R + P + PPR
Sbjct: 216 MILYTILTGEGPFDE---------YSYGKIKFINMIREEGLR-PTIPEDCPPR----LRN 261
Query: 238 VAAMCVHEQPDMRPVIADVVTALAYL 263
V +C P RP + +V L+ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 27/170 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM---PLGSVEDHLHDLSPGKKPLDWNTR 87
E + ++L HPN++ L G C LV E+ PL V LS + P D
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRV------LSGKRIPPD--IL 107
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--------KLSDFGLAKLGP 139
+ A ARG+ YLHD+A P+I+RDLK SNIL+ + K++DFGLA+
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--- 164
Query: 140 VGDNTHVSTRV--MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
H +T++ G Y + APE + + SDV+S+GV+L E+L+G
Sbjct: 165 ---EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E LMLS++ HP ++ + G D Q ++ +Y+ G + L P+
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFY 111
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
AA LEYLH K +IYRDLK NILLD+ H K++DFG AK P V+ +
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXL 163
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT Y APE T D +SFG+++ E+L+G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 110/265 (41%), Gaps = 32/265 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L ++F E +L++L H ++V G C +G L+V+EYM G +
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 72 LHDLSPGKK-----------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
L P K PL + +A+ A G+ YL A ++RDL N L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 161
Query: 121 LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
+ +G K+ DFG+++ D V R M + PE + T +SDV+SFGVVL
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 181 LEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVA 239
EI + G++ + R L + R PP + A+
Sbjct: 222 WEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA-------------CPP----EVYAIM 264
Query: 240 AMCVHEQPDMRPVIADVVTALAYLA 264
C +P R I DV L LA
Sbjct: 265 RGCWQREPQQRHSIKDVHARLQALA 289
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L ++F E +L++L H ++V G C +G L+V+EYM G +
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 72 L-------------HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSN 118
L D++PG PL + +A+ A G+ YL A ++RDL N
Sbjct: 111 LRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 165
Query: 119 ILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGV 178
L+ +G K+ DFG+++ D V R M + PE + T +SDV+SFGV
Sbjct: 166 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 225
Query: 179 VLLEILS 185
VL EI +
Sbjct: 226 VLWEIFT 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 110/265 (41%), Gaps = 32/265 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L ++F E +L++L H ++V G C +G L+V+EYM G +
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 72 LHDLSPGKK-----------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
L P K PL + +A+ A G+ YL A ++RDL N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 190
Query: 121 LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
+ +G K+ DFG+++ D V R M + PE + T +SDV+SFGVVL
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 181 LEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVA 239
EI + G++ + R L + R PP + A+
Sbjct: 251 WEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA-------------CPP----EVYAIM 293
Query: 240 AMCVHEQPDMRPVIADVVTALAYLA 264
C +P R I DV L LA
Sbjct: 294 RGCWQREPQQRHSIKDVHARLQALA 318
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C +V EYMP G++ D+
Sbjct: 60 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 119 LRECN--REEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVAD 173
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE ++KSDV++FGV+L EI
Sbjct: 174 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 102 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 155
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 156 GDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 106 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 159
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 160 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 100 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 153
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 154 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 24/254 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + R G +F+ E ++ L HP LV L G C + LV+E+M G + D+
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + + VI+RDL N L+ K+SD
Sbjct: 93 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSD 146
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 147 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 206 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWKERPEDRP 249
Query: 252 VIADVVTALAYLAS 265
+ ++ LA +A+
Sbjct: 250 AFSRLLRQLAAIAA 263
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 133 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 186
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 187 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 101 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 154
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 155 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 105 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 159 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 107 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 160
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 161 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 108 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 161
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 162 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVE 69
VA+KQL +G R+F E+ +L LH +V G G Q L LV EY+P G +
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D L + LD + + ++ +G+EYL + ++RDL NIL++ H K+
Sbjct: 102 DFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKI 155
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+DFGLAKL P+ + +V R G + APE + +SDV+SFGVVL E+ +
Sbjct: 156 ADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 102 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 155
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 156 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 109 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 162
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 163 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVE 69
VA+KQL +G R+F E+ +L LH +V G G Q L LV EY+P G +
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D L + LD + + ++ +G+EYL + ++RDL NIL++ H K+
Sbjct: 115 DFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKI 168
Query: 130 SDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+DFGLAKL P+ + +V R G + Y APE + +SDV+SFGVVL E+ +
Sbjct: 169 ADFGLAKLLPLDKDYYV-VREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 102 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 155
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 156 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVE 69
VA+KQL +G R+F E+ +L LH +V G G Q L LV EY+P G +
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D L + LD + + ++ +G+EYL + ++RDL NIL++ H K+
Sbjct: 103 DFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKI 156
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+DFGLAKL P+ + +V R G + APE + +SDV+SFGVVL E+ +
Sbjct: 157 ADFGLAKLLPLDKDYYV-VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 24/253 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + R G +F+ E ++ L HP LV L G C + LV+E+M G + D+
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + VI+RDL N L+ K+SD
Sbjct: 96 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 149
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 150 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 208
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 209 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWRERPEDRP 252
Query: 252 VIADVVTALAYLA 264
+ ++ LA +A
Sbjct: 253 AFSRLLRQLAEIA 265
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 94
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + IA ARG++YLH K+ +I+RDLK +NI L K
Sbjct: 95 YHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVK 148
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + + +SDVY+FG+VL E+++
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 186 GR 187
G+
Sbjct: 209 GQ 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 120 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 173
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 174 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 120 DYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 173
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 174 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 24/253 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + R G +F+ E ++ L HP LV L G C + LV+E+M G + D+
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + VI+RDL N L+ K+SD
Sbjct: 93 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 146
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 147 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 206 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWKERPEDRP 249
Query: 252 VIADVVTALAYLA 264
+ ++ LA +A
Sbjct: 250 AFSRLLRQLAEIA 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 24/253 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + R G +F+ E ++ L HP LV L G C + LV+E+M G + D+
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + VI+RDL N L+ K+SD
Sbjct: 91 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 144
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 145 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 204 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWKERPEDRP 247
Query: 252 VIADVVTALAYLA 264
+ ++ LA +A
Sbjct: 248 AFSRLLRQLAEIA 260
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 42 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 101 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 156 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L K+ +D ++ + +G+EYL K I+R+L NIL++ K+
Sbjct: 103 DYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKI 156
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 157 GDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 105 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 160 FGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 105 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 105 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGL++L GD + APE + ++KSDV++FGV+L EI +
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 46 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 105 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 98 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 153 FGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 42 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 101 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 156 FGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 45 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 104 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 158
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGL++L GD + APE + ++KSDV++FGV+L EI +
Sbjct: 159 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 98 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 153 FGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY + Q +V ++ S+
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSL 106
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + IA ARG++YLH K+ +I+RDLK +NI L K
Sbjct: 107 YHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVK 160
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQLTLKSDVYSFGVVLLEILS 185
+ DFGLA +H ++ G+ + APE + + + +SDVY+FG+VL E+++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 186 GR 187
G+
Sbjct: 221 GQ 222
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 102 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 157 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL--IGYCADGDQRLLVYEYMPLGSVE 69
VA+KQL +G R+F E+ +L LH +V + Y + LV EY+P G +
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D L + LD + + ++ +G+EYL + ++RDL NIL++ H K+
Sbjct: 99 DFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKI 152
Query: 130 SDFGLAKLGPVG-DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+DFGLAKL P+ D V + APE + +SDV+SFGVVL E+ +
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 102 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 157 FGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 46 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 104 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 158
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 159 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 43 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 102 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 157 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 123 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ L D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 175 VADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 232
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 233 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 278
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 279 AEMRPSFSELVSRISAIFS 297
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 45 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 103 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 158 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 54 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 113 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 167
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 168 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 50 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 107
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 108 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 162
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 163 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 39 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 98 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 153 FGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 46 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 105 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 160 FGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 106
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + IA ARG++YLH K+ +I+RDLK +NI L K
Sbjct: 107 YHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVK 160
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQLTLKSDVYSFGVVLLEILS 185
+ DFGLA +H ++ G+ + APE + + + +SDVY+FG+VL E+++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 186 GR 187
G+
Sbjct: 221 GQ 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 98 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 153 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 35 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 92
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 93 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 147
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 148 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 41 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+RDL N L+ + K++D
Sbjct: 100 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 155 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ EY+P GS+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
D+L + +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 105 DYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 159 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 46 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 103
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 104 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 158
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + APE G T+KSDV+SFG++L EI++
Sbjct: 159 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 48 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 105
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 106 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 160
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + APE G T+KSDV+SFG++L EI++
Sbjct: 161 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + R G +F+ E ++ L HP LV L G C + LV E+M G + D+
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + VI+RDL N L+ K+SD
Sbjct: 94 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 147
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 148 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 207 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWRERPEDRP 250
Query: 252 VIADVVTALAYLA 264
+ ++ LA +A
Sbjct: 251 AFSRLLRQLAEIA 263
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 49 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 106
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 107 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 161
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + APE G T+KSDV+SFG++L EI++
Sbjct: 162 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSVE 69
VA+K+L + + R+F E+ +L L H N+V G C +R L+ E++P GS+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
++L K+ +D ++ + +G+EYL K I+RDL NIL++ K+
Sbjct: 105 EYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K+ P D + G + APE + ++ SDV+SFGVVL E+ +
Sbjct: 159 GDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 98 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + APE G T+KSDV+SFG++L EI++
Sbjct: 153 FGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 42 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 100 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 154
Query: 132 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + R + + APE G T+KSDV+SFG++L EI++
Sbjct: 155 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 41 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 98
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 99 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 153
Query: 132 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + R + + APE G T+KSDV+SFG++L EI++
Sbjct: 154 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 98 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + R + + APE G T+KSDV+SFG++L EI++
Sbjct: 153 FGLARL--IEDN-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++F E +L+ L H ++V G C DGD ++V+EYM G +
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 72 LHDLSP------------GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI 119
L P K L + + IA+ A G+ YL A ++RDL N
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNC 164
Query: 120 LLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVV 179
L+ K+ DFG+++ D V M + PE + T +SDV+SFGV+
Sbjct: 165 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 224
Query: 180 LLEILS 185
L EI +
Sbjct: 225 LWEIFT 230
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 24/253 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK + + G +F+ E ++ L HP LV L G C + LV+E+M G + D+
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + T + + G+ YL + VI+RDL N L+ K+SD
Sbjct: 113 LR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 166
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
FG+ + + D ST + +PE + + KSDV+SFGV++ E+ S K
Sbjct: 167 FGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
Query: 192 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRP 251
+++ +E + +D + + P L + YQ + C E+P+ RP
Sbjct: 226 ENRSNSE---------VVEDISTGFRLYKPRLASTH----VYQ---IMNHCWKERPEDRP 269
Query: 252 VIADVVTALAYLA 264
+ ++ LA +A
Sbjct: 270 AFSRLLRQLAEIA 282
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G + FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 40 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L GK L + +A A G+ Y+ K I+RDL+ +N+L+ K++D
Sbjct: 99 LKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIAD 153
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS----- 185
FGLA++ + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 154 FGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
Query: 186 --GRKAVDTSKAAAE 198
GR D A ++
Sbjct: 212 YPGRTNADVMTALSQ 226
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 123 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 174
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 175 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 232
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 233 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 278
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 279 AEMRPSFSELVSRISAIFS 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 120 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 171
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 172 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 229
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 230 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 275
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 276 AEMRPSFSELVSRISAIFS 294
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY + Q +V ++ S+
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSL 90
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 91 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 144
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 186 GR 187
G+
Sbjct: 205 GQ 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 122 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 231
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 232 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 277
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 278 AEMRPSFSELVSRISAIFS 296
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 122 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 231
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 232 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 277
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 278 AEMRPSFSELVSRISAIFS 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L K ++RDL N +LD + K
Sbjct: 181 FIRNETHNPTVKDL-----IGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVK 232
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 233 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 290
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 291 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 336
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 337 AEMRPSFSELVSRISAIFS 355
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 287 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+R+L N L+ + K++D
Sbjct: 346 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 400
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 401 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 36 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 93
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+R+L+ +NIL+ K++D
Sbjct: 94 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIAD 148
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE G T+KSDV+SFG++L EI++
Sbjct: 149 FGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 245 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ ++ + +A + +EYL K I+R+L N L+ + K++D
Sbjct: 304 LRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 358
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 359 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G FL E ++ L H LV L + ++ EYM GS+ D
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDF 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L +P L N + +AA A G+ ++ ++ I+RDL+ +NIL+ K++D
Sbjct: 98 LK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L ++ + R + + APE G T+KSDV+SFG++L EI++
Sbjct: 153 FGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 92
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 93 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 146
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 147 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 186 GR 187
G+
Sbjct: 207 GQ 208
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G+++L A ++RDL N +LD + K
Sbjct: 127 FIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVK 178
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ D+ H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 179 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 236
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 237 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 282
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 283 AEMRPSFSELVSRISAIFS 301
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 36 VAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 93
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L D + L + +AA A G+ Y+ + I+RDL+ +NIL+ G K++D
Sbjct: 94 LKDGE--GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIAD 148
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE A G+ T+KSDV+SFG++L E+++
Sbjct: 149 FGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + ++ EFL E ++ + HPNLV L+G C ++ E+M G++ D+
Sbjct: 248 VAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + + ++ + + +A + +EYL K I+R+L N L+ + K++D
Sbjct: 307 LRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVAD 361
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
FGL++L GD + APE + ++KSDV++FGV+L EI
Sbjct: 362 FGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 95
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 96 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 149
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 186 GR 187
G+
Sbjct: 210 GQ 211
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVA+K + + G EF E + L HP LV G C+ +V EY+ G + +
Sbjct: 34 DVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L G +P + +++ G+ +L I+RDL N L+DR K+S
Sbjct: 93 YLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFG+ + V D+ +VS+ +GT + APE + + KSDV++FG+++ E+ S G
Sbjct: 147 DFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ D + V+ L+ R L +D Q Y C HE
Sbjct: 203 KMPYDLYTNSEVVLKVSQGHRLY----RPHLASDTIYQIMYS-------------CWHEL 245
Query: 247 PDMRPVIADVVTAL 260
P+ RP +++++
Sbjct: 246 PEKRPTFQQLLSSI 259
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 95
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 96 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 149
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 186 GR 187
G+
Sbjct: 210 GQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 90
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 91 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 144
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 186 GR 187
G+
Sbjct: 205 GQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 117
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 118 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 171
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 172 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
Query: 186 GR 187
G+
Sbjct: 232 GQ 233
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 121 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 172
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 173 VADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 230
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 231 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 276
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 277 AEMRPSFSELVSRISAIFS 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 118
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 119 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 172
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA + +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 173 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 186 GR 187
G+
Sbjct: 233 GQ 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 46 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 104 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T +S GT Y PE + K D++S GV+ E L G+
Sbjct: 157 CHAPSSRRTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 71 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 129 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + T + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 182 VHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 8 LLQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPL 65
L D AIK++ + + R+F E+ +L L HHPN++NL+G C L EY P
Sbjct: 51 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110
Query: 66 GSVEDHLH-----DLSPG-------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
G++ D L + P L + AA ARG++YL K I+RD
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 167
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKS 171
L NIL+ Y K++DFGL++ G +V + MG + A E T S
Sbjct: 168 LAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNS 222
Query: 172 DVYSFGVVLLEILS 185
DV+S+GV+L EI+S
Sbjct: 223 DVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 8 LLQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPL 65
L D AIK++ + + R+F E+ +L L HHPN++NL+G C L EY P
Sbjct: 41 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 100
Query: 66 GSVEDHLH-----DLSPG-------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
G++ D L + P L + AA ARG++YL K I+RD
Sbjct: 101 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRD 157
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKS 171
L NIL+ Y K++DFGL++ G +V + MG + A E T S
Sbjct: 158 LAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNS 212
Query: 172 DVYSFGVVLLEILS 185
DV+S+GV+L EI+S
Sbjct: 213 DVWSYGVLLWEIVS 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 62 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 120 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 172
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + T + GT Y PE + K D++S GV+ E L G+
Sbjct: 173 VHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P T + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 156 VHAPSSRRTELC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 20/274 (7%)
Query: 10 QDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
+ VAIK+++ Q + E L E+ +S HHPN+V+ D+ LV + + GSV
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 69 EDHL-HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
D + H ++ G+ LD +T I GLEYLH + I+RD+K NILL
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 125 YHPKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVL 180
+++DFG+ A L GD T R +GT + APE + + K+D++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 181 LEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAA 240
+E+ +G L P + + + D E+ +Y + F + + +
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDP----PSLETGVQDKEMLKKY-GKSFRKMI---S 269
Query: 241 MCVHEQPDMRPVIADVVTALAYLASQKYESDAEK 274
+C+ + P+ RP A+++ + ++ E EK
Sbjct: 270 LCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEK 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 90
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 91 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 144
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 145 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 186 GR 187
G+
Sbjct: 205 GQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 110
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 111 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 164
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 165 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 186 GR 187
G+
Sbjct: 225 GQ 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD-GDQRL-LVYEYMPLGSV 68
VA+K L + G Q + E+ +L L+H +++ G C D G++ L LV EY+PLGS+
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D+L S G L + A G+ YLH + I+R+L N+LLD K
Sbjct: 106 RDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVK 157
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ DFGLAK P G + + R G + Y APE K + SDV+SFGV L E+L+
Sbjct: 158 IGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 11 DVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
DVA+K L+ Q + F EV +L H N++ +GY Q +V ++ S+
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSL 118
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HLH + + + + IA A+G++YLH K+ +I+RDLK +NI L K
Sbjct: 119 YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVK 172
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQLTLKSDVYSFGVVLLEILS 185
+ DFGLA +H ++ G+ + APE + + +SDVY+FG+VL E+++
Sbjct: 173 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 186 GR 187
G+
Sbjct: 233 GQ 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 122 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 173
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 231
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 232 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 277
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 278 AEMRPSFSELVSRISAIFS 296
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 119 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 170
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 171 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 228
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 229 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 274
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 275 AEMRPSFSELVSRISAIFS 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 20/257 (7%)
Query: 10 QDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
+ VAIK+++ Q + E L E+ +S HHPN+V+ D+ LV + + GSV
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 69 EDHL-HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
D + H ++ G+ LD +T I GLEYLH + I+RD+K NILL
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 125 YHPKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVL 180
+++DFG+ A L GD T R +GT + APE + + K+D++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 181 LEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAA 240
+E+ +G L P + + + D E+ +Y + F + + +
Sbjct: 213 IELATGAAPYHKYPPMKVLMLTLQNDP----PSLETGVQDKEMLKKY-GKSFRKMI---S 264
Query: 241 MCVHEQPDMRPVIADVV 257
+C+ + P+ RP A+++
Sbjct: 265 LCLQKDPEKRPTAAELL 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGD-QRLLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 141 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 192
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 193 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 250
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 251 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 296
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 297 AEMRPSFSELVSRISAIFS 315
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 159 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 108 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 161 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 114 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 165
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 166 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 223
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 224 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 269
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 270 AEMRPSFSELVSRISAIFS 288
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 108 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 161 VHAPSSRR----TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K L + G + FL E ++ L H LV L + ++ E+M GS+ D
Sbjct: 39 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L GK L + +A A G+ Y+ K I+RDL+ +N+L+ K++D
Sbjct: 98 LKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIAD 152
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS----- 185
FGLA++ + DN + + + APE G T+KS+V+SFG++L EI++
Sbjct: 153 FGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
Query: 186 --GRKAVDTSKAAAE 198
GR D A ++
Sbjct: 211 YPGRTNADVMSALSQ 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K + + G FL E ++ L H LV L + ++ E+M GS+ D
Sbjct: 42 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K+PL + +A A G+ ++ + I+RDL+ +NIL+ K++D
Sbjct: 100 LKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIAD 154
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA++ + DN + + + APE G T+KSDV+SFG++L+EI++
Sbjct: 155 FGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL A ++RDL N +LD + K
Sbjct: 121 FIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 172
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 173 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 230
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 231 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 276
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 277 AEMRPSFSELVSRISAIFS 295
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL A ++RDL N +LD + K
Sbjct: 120 FIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 171
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 172 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 229
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 230 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 275
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 276 AEMRPSFSELVSRISAIFS 294
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 156 VHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL A ++RDL N +LD + K
Sbjct: 117 FIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 168
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 226
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 227 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 272
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 273 AEMRPSFSELVSRISAIFS 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL K ++RDL N +LD + K
Sbjct: 140 FIRNETHNPTVKDL-----IGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVK 191
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 192 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 249
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 250 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 295
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 296 AEMRPSFSELVSRISAIFS 314
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 13 AIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQR-LLVYEYMPLGSVED 70
A+K L+R G +FL E +++ HPN+++L+G C + L+V YM G + +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 71 HLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + + P K L + A+G++YL A ++RDL N +LD + K
Sbjct: 122 FIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVK 173
Query: 129 LSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++DFGLA+ + H T + A E +T + T KSDV+SFGV+L E++
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-- 231
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
T A + + D T + L LQ +Y P Y+ V C H +
Sbjct: 232 -----TRGAPPYPDVNTF------DITVYLLQGRRLLQPEYCPDPLYE---VMLKCWHPK 277
Query: 247 PDMRPVIADVVTALAYLAS 265
+MRP +++V+ ++ + S
Sbjct: 278 AEMRPSFSELVSRISAIFS 296
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 46 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 104 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 157 VHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 108 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 161 VHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 156 VHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P T + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 156 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 6 LCLLQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
LC QD VA+K L ++F E +L+ L H ++V G C +GD ++V+EY
Sbjct: 37 LCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96
Query: 63 MPLGSVEDHLHDLSP-------GKKP--LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
M G + L P G P L + + IA A G+ YL A ++RD
Sbjct: 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRD 153
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDV 173
L N L+ K+ DFG+++ D V M + PE + T +SDV
Sbjct: 154 LATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 213
Query: 174 YSFGVVLLEILS 185
+S GVVL EI +
Sbjct: 214 WSLGVVLWEIFT 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD-GDQRL-LVYEYMPLGSV 68
VA+K L + G Q + E+ +L L+H +++ G C D G++ L LV EY+PLGS+
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D+L S G L + A G+ YLH + I+R+L N+LLD K
Sbjct: 106 RDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVK 157
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ DFGLAK P G + + R G + Y APE K + SDV+SFGV L E+L+
Sbjct: 158 IGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P T + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 156 VHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 49 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 107 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 159
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 160 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 159 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 185 SGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY---PPRGFYQALAVAAM 241
S AEQ +Q + ++ + G Y P + + M
Sbjct: 227 S----------LAEQP--------YQGLSNEQVLKFV-MDGGYLDQPDNCPERVTDLMRM 267
Query: 242 CVHEQPDMRPVIADVVTAL 260
C P+MRP ++V L
Sbjct: 268 CWQFNPNMRPTFLEIVNLL 286
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 44 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 101
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 102 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 154
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 155 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD-GDQRL-LVYEYMPLGSV 68
VA+K L + G Q + E+ +L L+H +++ G C D G L LV EY+PLGS+
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D+L S G L + A G+ YLH + I+RDL N+LLD K
Sbjct: 123 RDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVK 174
Query: 129 LSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ DFGLAK P G + V + APE K + SDV+SFGV L E+L+
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 42 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 99
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 100 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 152
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P T + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 153 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 10 QDVAIKQLDRNGVQGNREF---LVEVLMLSL-LHHPNLVNLIGYCADGDQRLLVYEYMPL 65
Q AIK L ++ V + + +VE +LSL HP L ++ + V EY+
Sbjct: 44 QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 103
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
G + H+ D + AA GL++LH K ++YRDLK NILLD+
Sbjct: 104 GDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDG 156
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
H K++DFG+ K +GD + GT Y APE + D +SFGV+L E+L
Sbjct: 157 HIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 214
Query: 186 GR 187
G+
Sbjct: 215 GQ 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 8 LLQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPL 65
L D AIK++ + + R+F E+ +L L HHPN++NL+G C L EY P
Sbjct: 48 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 107
Query: 66 GSVEDHLH-----DLSPG-------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
G++ D L + P L + AA ARG++YL K I+R+
Sbjct: 108 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRN 164
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKS 171
L NIL+ Y K++DFGL++ G +V + MG + A E T S
Sbjct: 165 LAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNS 219
Query: 172 DVYSFGVVLLEILS 185
DV+S+GV+L EI+S
Sbjct: 220 DVWSYGVLLWEIVS 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K + + G FL E ++ L H LV L + ++ E+M GS+ D
Sbjct: 215 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 272
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K+PL + +A A G+ ++ + I+RDL+ +NIL+ K++D
Sbjct: 273 LKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIAD 327
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA++ + DN + + + APE G T+KSDV+SFG++L+EI++
Sbjct: 328 FGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 10 QDVAIKQLDRNGVQGNREF---LVEVLMLSL-LHHPNLVNLIGYCADGDQRLLVYEYMPL 65
Q AIK L ++ V + + +VE +LSL HP L ++ + V EY+
Sbjct: 43 QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
G + H+ D + AA GL++LH K ++YRDLK NILLD+
Sbjct: 103 GDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDG 155
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
H K++DFG+ K +GD + GT Y APE + D +SFGV+L E+L
Sbjct: 156 HIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213
Query: 186 GR 187
G+
Sbjct: 214 GQ 215
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 163
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 185 S 185
S
Sbjct: 224 S 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 185 S 185
S
Sbjct: 227 S 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 47 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K+++FG +
Sbjct: 105 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS 157
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 158 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G +
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 70 DHLH---------DLSPGK----------KPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 110
+ L L+PG+ +PL+ + ++ A+G+ +L K I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CI 180
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 170
+RD+ N+LL G+ K+ DFGLA+ N V + APE T++
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 171 SDVYSFGVVLLEILS 185
SDV+S+G++L EI S
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 71 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 129 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 181
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 182 VHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G +
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 70 DHLHDLSPGK------KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
+ L + +PL+ + ++ A+G+ +L A I+RD+ N+LL
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 195
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
G+ K+ DFGLA+ N V + APE T++SDV+S+G++L EI
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 184 LS 185
S
Sbjct: 256 FS 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 47 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 104
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 105 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 157
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + GT Y PE + K D++S GV+ E L G+
Sbjct: 158 VHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L+ G + N EF+ E L+++ + HP+LV L+G C + LV + MP G + +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 128
Query: 71 HLH---DLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++H D + L+W ++ A+G+ YL ++ +++RDL N+L+ H
Sbjct: 129 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLEERR---LVHRDLAARNVLVKSPNHV 179
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
K++DFGLA+L + + + + A E + T +SDV+S+GV + E+++
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L+ G + N EF+ E L+++ + HP+LV L+G C + LV + MP G + +
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLE 105
Query: 71 HLH---DLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++H D + L+W ++ A+G+ YL ++ +++RDL N+L+ H
Sbjct: 106 YVHEHKDNIGSQLLLNWCVQI------AKGMMYLEERR---LVHRDLAARNVLVKSPNHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
K++DFGLA+L + + + + A E + T +SDV+S+GV + E+++
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G +
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 70 DHLHDLSPGK------KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
+ L + +PL+ + ++ A+G+ +L K I+RD+ N+LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN 187
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
G+ K+ DFGLA+ N V + APE T++SDV+S+G++L EI
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 184 LS 185
S
Sbjct: 248 FS 249
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K+++FG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 159 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVED 70
VA+K + + + FL E +++ L H NLV L+G + L +V EYM GS+ D
Sbjct: 47 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L S G+ L + +K + +EYL ++RDL N+L+ K+S
Sbjct: 105 YLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 159
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K ST+ G + APE + + + KSDV+SFG++L EI S
Sbjct: 160 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + +F E +++ +PN+V L+G CA G L++EYM G + +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 71 HLHDL--------------------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 110
L + SPG PL ++ IA A G+ YL ++ +
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FV 196
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 170
+RDL N L+ K++DFGL++ D + PE + T +
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE 256
Query: 171 SDVYSFGVVLLEILS 185
SDV+++GVVL EI S
Sbjct: 257 SDVWAYGVVLWEIFS 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + GT Y PE + K D++S GV+ E L G+
Sbjct: 159 VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 49 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 107 S----RFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS 159
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
P T + GT Y PE + K D++S GV+ E L G
Sbjct: 160 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVED 70
VA+K + + + FL E +++ L H NLV L+G + L +V EYM GS+ D
Sbjct: 32 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L S G+ L + +K + +EYL ++RDL N+L+ K+S
Sbjct: 90 YLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 144
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K ST+ G + APE + + + KSDV+SFG++L EI S
Sbjct: 145 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 32/255 (12%)
Query: 12 VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R+FL E ++ HPN++ L G G ++V EYM GS++
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD G+ + M GA G+ YL D ++RDL N+L+D K
Sbjct: 140 FLRTHD---GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 129 LSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+SDFGL++ L D + +T + APE + SDV+SFGVV+ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL--- 248
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP-PRGFYQALAVAAM-CVHE 245
A+ + + T +I+ E + P P G AL + C H+
Sbjct: 249 ---------------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHK 293
Query: 246 QPDMRPVIADVVTAL 260
RP + +V+ L
Sbjct: 294 DRAQRPRFSQIVSVL 308
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY P G V L L
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 108 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P T + GT Y PE + K D++S GV+ E L G+
Sbjct: 161 VHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + GT Y PE + K D++S GV+ E L G+
Sbjct: 159 VHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 156 VHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
V IK + D++G Q + +L + L H ++V L+G C G LV +Y+PLGS+ D
Sbjct: 45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD 103
Query: 71 HLHDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
H+ P L+W ++ A+G+ YL + +++R+L N+LL
Sbjct: 104 HVRQHRGALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQV 154
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+++DFG+A L P D + + + A E G+ T +SDV+S+GV + E+++
Sbjct: 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
V IK + D++G Q + +L + L H ++V L+G C G LV +Y+PLGS+ D
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLD 121
Query: 71 HLHDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
H+ P L+W ++ A+G+ YL + +++R+L N+LL
Sbjct: 122 HVRQHRGALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQV 172
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+++DFG+A L P D + + + A E G+ T +SDV+S+GV + E+++
Sbjct: 173 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 294 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 351
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 352 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 406
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 407 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVED 70
VA+K + + + FL E +++ L H NLV L+G + L +V EYM GS+ D
Sbjct: 219 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L S G+ L + +K + +EYL ++RDL N+L+ K+S
Sbjct: 277 YLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 331
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K ST+ G + APE + + + KSDV+SFG++L EI S
Sbjct: 332 DFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 46 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 104 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 156
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + GT Y PE + K D++S GV+ E L G+
Sbjct: 157 VHAPSSRR----DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 38 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 95
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 96 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 150
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 151 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 156 VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL 102
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 103 S----KFDEQRTATYITELANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWS 155
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + GT Y PE + K D++S GV+ E L G+
Sbjct: 156 VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 28 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 87
F EV +L H N++ +GY D +V ++ S+ HLH +
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH---VQETKFQMFQL 134
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ IA A+G++YLH K +I+RD+K +NI L G K+ DFGLA + +
Sbjct: 135 IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 148 TRVMGTYGYCAPEYAK---TGQLTLKSDVYSFGVVLLEILSG 186
+ G+ + APE + + +SDVYS+G+VL E+++G
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVED 70
VA+K + + + FL E +++ L H NLV L+G + L +V EYM GS+ D
Sbjct: 38 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L S G+ L + +K + +EYL ++RDL N+L+ K+S
Sbjct: 96 YLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 150
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL K ST+ G + APE + + KSDV+SFG++L EI S
Sbjct: 151 DFGLTKEAS-------STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K + + G FL E ++ L H LV L + ++ E+M GS+ D
Sbjct: 209 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 266
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K+PL + +A A G+ ++ + I+RDL+ +NIL+ K++D
Sbjct: 267 LKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIAD 321
Query: 132 FGLAKLG---PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA++G P+ + APE G T+KSDV+SFG++L+EI++
Sbjct: 322 FGLARVGAKFPIK--------------WTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 269 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 324 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 268
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 269 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 324 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 165
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 185 S 185
S
Sbjct: 226 S 226
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSV 68
VA+K L G Q + E+ +L L+H ++V G C D ++ LV EY+PLGS+
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D+L G L + A G+ YLH + I+R L N+LLD K
Sbjct: 101 RDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVK 152
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ DFGLAK P G + + R G + Y APE K + SDV+SFGV L E+L+
Sbjct: 153 IGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 12 VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R+FL E ++ HPN++ L G G ++V EYM GS++
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD G+ + M GA G+ YL D ++RDL N+L+D K
Sbjct: 140 FLRTHD---GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + APE + SDV+SFGVV+ E+L
Sbjct: 192 VSDFGLSRV--LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL- 248
Query: 186 GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP-PRGFYQALAVAAM-CV 243
A+ + + T +I+ E + P P G AL + C
Sbjct: 249 -----------------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCW 291
Query: 244 HEQPDMRPVIADVVTALAYL 263
H+ RP + +V+ L L
Sbjct: 292 HKDRAQRPRFSQIVSVLDAL 311
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 105
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 106 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 158
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + GT Y PE + K D++S GV+ E L G+ + +
Sbjct: 159 VHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 185 S 185
S
Sbjct: 227 S 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--LLVYEYMPLGSV 68
VA+K L G Q + E+ +L L+H ++V G C D ++ LV EY+PLGS+
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D+L G L + A G+ YLH + I+R L N+LLD K
Sbjct: 100 RDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVK 151
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ DFGLAK P G + + R G + Y APE K + SDV+SFGV L E+L+
Sbjct: 152 IGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 34 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 91
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 92 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 146
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 147 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 36 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 93
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 94 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 148
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 149 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDF 268
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 269 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 324 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 35 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDF 92
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 93 LKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 147
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 148 FGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++R+L N ++
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHD 167
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
Query: 185 SGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY---PPRGFYQALAVAAM 241
S AEQ +Q + ++ + G Y P + + M
Sbjct: 228 S----------LAEQP--------YQGLSNEQVLKFV-MDGGYLDQPDNCPERVTDLMRM 268
Query: 242 CVHEQPDMRPVIADVVTAL 260
C P+MRP ++V L
Sbjct: 269 CWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++R+L N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHD 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
+ K+ DFG+ + D + + + APE K G T SD++SFGVVL EI
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 185 SGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY---PPRGFYQALAVAAM 241
S AEQ +Q + ++ + G Y P + + M
Sbjct: 227 S----------LAEQP--------YQGLSNEQVLKFV-MDGGYLDQPDNCPERVTDLMRM 267
Query: 242 CVHEQPDMRPVIADVVTAL 260
C P+MRP ++V L
Sbjct: 268 CWQFNPNMRPTFLEIVNLL 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + ++A A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 100 LKGET--GKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 155 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ + H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY P G V L L
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 108 S----KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS 160
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
P + + GT Y PE + K D++S GV+ E L G+
Sbjct: 161 VHAP----SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGLA++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLARV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
+ +K+L R + R FL EV ++ L HPN++ IG + + EY+ G++
Sbjct: 38 MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI 97
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
+ + + P W+ R+ A A G+ YLH +I+RDL N L+ + ++D
Sbjct: 98 IKSMD-SQYP--WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVAD 151
Query: 132 FGLAKL------GPVG-------DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGV 178
FGLA+L P G D T V+G + APE K DV+SFG+
Sbjct: 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGI 210
Query: 179 VLLEILSGRKAVD 191
VL EI+ GR D
Sbjct: 211 VLCEII-GRVNAD 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K ++ + R EFL E ++ ++V L+G + G L+V E M G ++
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 71 HLHDL------SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L +PG+ P +++AA A G+ YL+ K ++RDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSDVYSFGVV 179
+ K+ DFG+ + D + G G + APE K G T SD++SFGVV
Sbjct: 167 FTVKIGDFGMTR-----DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 180 LLEILS 185
L EI S
Sbjct: 222 LWEITS 227
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L RE L+ L M L H N+VNL+G C L++EY G +
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 70 DHLHD----LSPGKKPLDWNTRMK---------------IAAGAARGLEYLHDKAKPPVI 110
++L S + + R++ A A+G+E+L K+ +
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CV 194
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 170
+RDL N+L+ G K+ DFGLA+ N V + APE G T+K
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 171 SDVYSFGVVLLEILS 185
SDV+S+G++L EI S
Sbjct: 255 SDVWSYGILLWEIFS 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 11 DVAIKQLDRNGVQGN---REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
+VAIK +D+ + + EV + L HP+++ L Y D + LV E G
Sbjct: 38 EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGE 97
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ +L + KP N G+ YLH +++RDL SN+LL R +
Sbjct: 98 MNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNI 151
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
K++DFGLA + H + + GT Y +PE A L+SDV+S G + +L GR
Sbjct: 152 KIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
Query: 188 KAVDTSKAAAEQSLVAWA 205
DT + V A
Sbjct: 210 PPFDTDTVKNTLNKVVLA 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+VAI+Q++ Q +E ++ E+L++ +PN+VN + GD+ +V EY+ GS+
Sbjct: 46 QEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + +D + + LE+LH VI+RD+K NILL K
Sbjct: 105 TDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVK 156
Query: 129 LSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG A++ P + + ST V GT + APE K D++S G++ +E++ G
Sbjct: 157 LTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 26 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
+ F EV S L H N+V++I + D LV EY+ ++ +++ S G PL +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHG--PLSVD 111
Query: 86 TRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH 145
T + G+++ HD +++RD+K NIL+D K+ DFG+AK T
Sbjct: 112 TAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 146 VSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+ V+GT Y +PE AK +D+YS G+VL E+L G
Sbjct: 169 -TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + EV + S L HPN++ L GY D + L+ EY PLG+V L L
Sbjct: 49 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 106
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
S D A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 107 S----RFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS 159
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
P + GT Y PE + K D++S GV+ E L G
Sbjct: 160 VHAPSSRR----DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 124 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 175
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 176 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 107 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 158
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 159 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM G + D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G +
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+ L + +P P L + ++ A+G+ +L K I+RD+
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAAR 195
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+LL G+ K+ DFGLA+ N V + APE T++SDV+S+G
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 178 VVLLEILS 185
++L EI S
Sbjct: 256 ILLWEIFS 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDF 99
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L + K L + ++A A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 100 LKGET--GKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 155 FGLARL--IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS P + G + ++ EY+ GS D L PG PLD I
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATI 124
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 125 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 179
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQ 210
+GT + APE K K+D++S G+ +E+ G L+ P
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 236
Query: 211 DRTRHSLIADPELQGQY--PPRGFYQALAVAAMCVHEQPDMRPVIADVV 257
P L+G Y P + F +A C++++P RP +++
Sbjct: 237 ----------PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 269
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM G + D
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDF 102
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 103 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGLA+L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 158 FGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+FL E +L HPN+V LIG C Q+ +Y M L D L L L T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ AA G+EYL K I+RDL N L+ K+SDFG+++ G
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS 271
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ APE G+ + +SDV+SFG++L E S
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS P + G + ++ EY+ GS D L PG PLD I
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATI 109
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXF 164
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQ 210
+GT + APE K K+D++S G+ +E+ G L+ P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 221
Query: 211 DRTRHSLIADPELQGQY--PPRGFYQALAVAAMCVHEQPDMRPVIADVV 257
P L+G Y P + F +A C++++P RP +++
Sbjct: 222 ----------PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS P + G + ++ EY+ GS D L PG PLD I
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATI 109
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 164
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQ 210
+GT + APE K K+D++S G+ +E+ G L+ P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 221
Query: 211 DRTRHSLIADPELQGQY--PPRGFYQALAVAAMCVHEQPDMRPVIADVV 257
P L+G Y P + F +A C++++P RP +++
Sbjct: 222 ----------PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS P + G + ++ EY+ GS D L PG PLD I
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATI 129
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 184
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQ 210
+GT + APE K K+D++S G+ +E+ G L+ P
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 241
Query: 211 DRTRHSLIADPELQGQY--PPRGFYQALAVAAMCVHEQPDMRPVIADVV 257
P L+G Y P + F +A C++++P RP +++
Sbjct: 242 ----------PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELL 274
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 10 QDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q VAIKQ+ V+ + +E + E+ ++ P++V G +V EY GSV
Sbjct: 55 QIVAIKQVP---VESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + K L + I +GLEYLH K I+RD+K NILL+ H K
Sbjct: 112 SDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAK 165
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG+A G + D V+GT + APE + +D++S G+ +E+ G+
Sbjct: 166 LADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 134 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 185
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 186 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN+V+L G G ++V E+M G+++
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G+ YL D ++RDL NIL++ K
Sbjct: 134 FLRKHDGQFTVIQL-----VGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCK 185
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ G + APE + + T SDV+S+G+V+ E++S
Sbjct: 186 VSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+FL E +L HPN+V LIG C Q+ +Y M L D L L L T
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ AA G+EYL K I+RDL N L+ K+SDFG+++ G
Sbjct: 215 LLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ APE G+ + +SDV+SFG++L E S
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V EYM GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL ++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLGRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+VAI+Q++ Q +E ++ E+L++ +PN+VN + GD+ +V EY+ GS+
Sbjct: 46 QEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + +D + + LE+LH VI+RD+K NILL K
Sbjct: 105 TDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVK 156
Query: 129 LSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG A++ P + ++GT + APE K D++S G++ +E++ G
Sbjct: 157 LTDFGFCAQITP---EQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN+++L G +++ E+M GS++
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + G+ + + + G A G++YL D ++RDL NIL++ K+S
Sbjct: 124 FLRQ-NDGQFTV--IQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVS 177
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL++ + D+T T G + APE + + T SDV+S+G+V+ E++S
Sbjct: 178 DFGLSRF--LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG--- 135
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK----------AKPPVIYRDLKCSNI 119
D L+ L + L+ + IA A + LH A I+RD+ N+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 195
Query: 120 LLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVV 179
LL G+ K+ DFGLA+ N V + APE T++SDV+S+G++
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 180 LLEILS 185
L EI S
Sbjct: 256 LWEIFS 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+VAI+Q++ Q +E ++ E+L++ +PN+VN + GD+ +V EY+ GS+
Sbjct: 47 QEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + +D + + LE+LH VI+RD+K NILL K
Sbjct: 106 TDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVK 157
Query: 129 LSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG A++ P + ++GT + APE K D++S G++ +E++ G
Sbjct: 158 LTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 70 DHLH---------DLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L +P P L + A ARG+EYL K I+RDL
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+VAI+Q++ Q +E ++ E+L++ +PN+VN + GD+ +V EY+ GS+
Sbjct: 47 QEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + +D + + LE+LH VI+R++K NILL K
Sbjct: 106 TDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVK 157
Query: 129 LSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG A++ P + + ST V GT + APE K D++S G++ +E++ G
Sbjct: 158 LTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+VAI+Q++ Q +E ++ E+L++ +PN+VN + GD+ +V EY+ GS+
Sbjct: 46 QEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D + + +D + + LE+LH VI+RD+K NILL K
Sbjct: 105 TDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVK 156
Query: 129 LSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
L+DFG A++ P + ++GT + APE K D++S G++ +E++ G
Sbjct: 157 LTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VAIK L + G FL E ++ L H LV L ++ + +V EYM GS+ D
Sbjct: 212 VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 269
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
L K L + +AA A G+ Y+ + ++RDL+ +NIL+ K++D
Sbjct: 270 LK--GEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 324
Query: 132 FGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
FGL +L + DN + + + + APE A G+ T+KSDV+SFG++L E+ +
Sbjct: 325 FGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 12 VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + REFL E ++ HPN++ L G + +++ E+M G+++
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L L+ G+ + + + G A G+ YL A+ ++RDL NIL++ K+S
Sbjct: 107 FLR-LNDGQFTVI--QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVS 160
Query: 131 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL++ + T +G + APE + T SD +S+G+V+ E++S
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G +
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 70 DHLH----------DLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI 119
+ L + L + ++ A+G+ +L K I+RD+ N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNV 195
Query: 120 LLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVV 179
LL G+ K+ DFGLA+ N V + APE T++SDV+S+G++
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 180 LLEILS 185
L EI S
Sbjct: 256 LWEIFS 261
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS P + G + ++ EY+ GS D L PG PL+ I
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPG--PLEETYIATI 121
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 122 LREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXF 176
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQ 210
+GT + APE K K+D++S G+ A++ +K S + R LF
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGIT---------AIELAKGEPPNSDLHPMRVLF- 226
Query: 211 DRTRHSLI---ADPELQGQY--PPRGFYQALAVAAMCVHEQPDMRPVIADVV 257
LI + P L+GQ+ P + F +A C+++ P RP +++
Sbjct: 227 ------LIPKNSPPTLEGQHSKPFKEFVEA------CLNKDPRFRPTAKELL 266
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 35 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 94 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+R G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 148 DFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 204 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 246
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 247 ADERPTFKILLSNI 260
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN+++L G ++V EYM GS++
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 71 HLHDLSPGKKPLDWNTRMKIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
L KK T +++ G + G++YL D ++RDL NIL++
Sbjct: 113 FL------KKNDGQFTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVC 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+SDFGL+++ + D+ + G + APE + T SDV+S+G+V+ E++
Sbjct: 164 KVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
Query: 185 S 185
S
Sbjct: 222 S 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 171
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 172 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 227 VWSFGVLLWEIFT 239
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 12 VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + REFL E ++ HPN++ L G + +++ E+M G+++
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L L+ G+ + + + G A G+ YL A+ ++RDL NIL++ K+S
Sbjct: 105 FLR-LNDGQFTVI--QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVS 158
Query: 131 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL++ + T +G + APE + T SD +S+G+V+ E++S
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 172
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 173 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 228 VWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 168
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 169 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 224 VWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 24/184 (13%)
Query: 13 AIKQLDR-NGVQGNREFLVEVLMLSLLHHPNLVNLIGYC--ADGDQRLLVYEYMPLGSVE 69
AIK L R +Q FL E L++ L+HPN++ LIG +G +L+ YM G +
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLL 111
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAG--AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+ SP + P + I+ G ARG+EYL A+ ++RDL N +LD +
Sbjct: 112 QFIR--SPQRNP---TVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTV 163
Query: 128 KLSDFGLAK------LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
K++DFGLA+ V + H V T A E +T + T KSDV+SFGV+L
Sbjct: 164 KVADFGLARDILDREYYSVQQHRHARLPVKWT----ALESLQTYRFTTKSDVWSFGVLLW 219
Query: 182 EILS 185
E+L+
Sbjct: 220 ELLT 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLG 66
+ VA+K L +G + E+ +L L+H N+V G C + G+ L+ E++P G
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
S++++L K ++ ++K A +G++YL + ++RDL N+L++ +
Sbjct: 111 SLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 164
Query: 127 PKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFGL K T R + Y APE + + SDV+SFGV L E+L
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
Query: 185 S 185
+
Sbjct: 224 T 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 159
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 160 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 106
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 157
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 218 SKPYDGIPASEISSIL 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 115
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 116 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 166
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 226
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 227 SKPYDGIPASEISSIL 242
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 160
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 221 SKPYDGIPASEISSIL 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 224 SKPYDGIPASEISSIL 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 219 SKPYDGIPASEISSIL 234
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 168
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 169 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 108
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 220 SKPYDGIPASEISSIL 235
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLD 106
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 107 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 157
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 218 SKPYDGIPASEISSIL 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 220 SKPYDGIPASEISSIL 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLG 66
+ VA+K L +G + E+ +L L+H N+V G C + G+ L+ E++P G
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
S++++L K ++ ++K A +G++YL + ++RDL N+L++ +
Sbjct: 99 SLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQ 152
Query: 127 PKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFGL K T R + Y APE + + SDV+SFGV L E+L
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
Query: 185 S 185
+
Sbjct: 212 T 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLIGY----CADGDQRL 57
L L +DVA+K L R + + F + E + L+HP +V + G
Sbjct: 34 LRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPY 92
Query: 58 LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+V EY+ ++ D +H + P+ +++ A A + L + H +I+RD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 118 NILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 177 GVVLLEILSG 186
G VL E+L+G
Sbjct: 206 GCVLYEVLTG 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V E M GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
K D A+ S++ L Q PP + C
Sbjct: 219 SKPYDGIPASEISSILEKGERLPQ-----------------PPICTIDVYMIMVKCWMID 261
Query: 247 PDMRPVIADVVTALAYLAS--QKY 268
D RP +++ + +A Q+Y
Sbjct: 262 ADSRPKFRELIIEFSKMARDPQRY 285
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V E M GS++
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 107 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 158
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 159 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 11 DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
DVAIK L + + + E + E ++ L +P +V LIG C + +LV E G
Sbjct: 39 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP-- 95
Query: 70 DHLHDLSPGKKP-LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
LH GK+ + + ++ + G++YL +K ++RDL N+LL ++ K
Sbjct: 96 --LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAK 150
Query: 129 LSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+K LG D+++ + R G + + APE + + +SDV+S+GV + E LS
Sbjct: 151 ISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 220 SKPYDGIPASEISSIL 235
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 108
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 109 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 159
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 220 SKPYDGIPASEISSIL 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 69 EDHL----HDLSPGKKP-------LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+L ++ P K P L + + A+G+E+L A I+RDL
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
NILL K+ DFGLA+ + + APE T++SDV+SFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 178 VVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQA 235
V+L EI S G K E + R L + R R PE+ YQ
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQT 283
Query: 236 LAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
+ C H +P RP +++V L L + D
Sbjct: 284 MLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 32/258 (12%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 130
Query: 71 HL--HDLSPGKKPL-DWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L +W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 131 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 181
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 241
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
K D A+ S++ L Q PP + C
Sbjct: 242 SKPYDGIPASEISSILEKGERLPQ-----------------PPICTIDVYMIMVKCWMID 284
Query: 247 PDMRPVIADVVTALAYLA 264
D RP +++ + +A
Sbjct: 285 ADSRPKFRELIIEFSKMA 302
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 224 SKPYDGIPASEISSIL 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 111
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 112 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 162
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 222
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 223 SKPYDGIPASEISSIL 238
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 220
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 221 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 276 VWSFGVLLWEIFT 288
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
K D A+ S++ L Q PP + C
Sbjct: 224 SKPYDGIPASEISSILEKGERLPQ-----------------PPICTIDVYMIMVKCWMID 266
Query: 247 PDMRPVIADVVTALAYLAS--QKY 268
D RP +++ + +A Q+Y
Sbjct: 267 ADSRPKFRELIIEFSKMARDPQRY 290
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 99
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 100 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 150
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 211 SKPYDGIPASEISSIL 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLI----GYCADGDQRL 57
L L +DVA+K L R + + F + E + L+HP +V + G
Sbjct: 34 LRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 58 LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+V EY+ ++ D +H + P+ +++ A A + L + H +I+RD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 118 NILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 177 GVVLLEILSG 186
G VL E+L+G
Sbjct: 206 GCVLYEVLTG 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 39 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 133
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 156
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNY 187
Query: 157 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
APE + D ++ GV++ E+++GR D
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 10 QDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLI----GYCADGDQRLLVYE 61
+DVA+K L R + + F + E + L+HP +V + G +V E
Sbjct: 38 RDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
Y+ ++ D +H + P+ +++ A A + L + H +I+RD+K +NIL+
Sbjct: 97 YVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILI 149
Query: 122 DRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS G VL
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 181 LEILSG 186
E+L+G
Sbjct: 210 YEVLTG 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 12 VAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
VAIK++ +G Q N ++ + EV L L HPN + G LV EY LGS
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSA 140
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D L KKPL + GA +GL YLH +I+RD+K NILL K
Sbjct: 141 SDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVK 194
Query: 129 LSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEI 183
L DFG A + P + +GT + APE GQ K DV+S G+ +E+
Sbjct: 195 LGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 39 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLA 165
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 156
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNY 219
Query: 157 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
APE + D ++ GV++ E+++GR D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 12 VAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
VAIK++ +G Q N ++ + EV L L HPN + G LV EY LGS
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSA 101
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D L KKPL + GA +GL YLH +I+RD+K NILL K
Sbjct: 102 SDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVK 155
Query: 129 LSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEI 183
L DFG A + P + +GT + APE GQ K DV+S G+ +E+
Sbjct: 156 LGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L N R+ L E +L ++HP+++ L G C+ LL+ EY GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 71 HLHD---LSPG-----------------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 110
L + + PG ++ L + A ++G++YL A+ ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLV 172
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLT 168
+RDL NIL+ G K+SDFGL++ V + R G + A E T
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 169 LKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP 228
+SDV+SFGV+L EI+ + + R +T H + + P
Sbjct: 231 TQSDVWSFGVLLWEIV--------TLGGNPYPGIPPERLFNLLKTGHRM--------ERP 274
Query: 229 PRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQK 267
+ + C ++PD RPV AD+ L + ++
Sbjct: 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN++ L G ++V E M GS++
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 71 HL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
L HD L + + G A G++YL D ++RDL NIL++ K
Sbjct: 136 FLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+++ + D+ + G + +PE + T SDV+S+G+VL E++S
Sbjct: 188 VSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L N R+ L E +L ++HP+++ L G C+ LL+ EY GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 71 HLHD---LSPG-----------------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 110
L + + PG ++ L + A ++G++YL A+ ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLT 168
+RDL NIL+ G K+SDFGL++ V + R G + A E T
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 169 LKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP 228
+SDV+SFGV+L EI+ + + R +T H + + P
Sbjct: 231 TQSDVWSFGVLLWEIV--------TLGGNPYPGIPPERLFNLLKTGHRM--------ERP 274
Query: 229 PRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQK 267
+ + C ++PD RPV AD+ L + ++
Sbjct: 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 164
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 165 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 220 VWSFGVLLWEIFT 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 87
+VE +L+LL P + + C RL V EY+ G + H+ + K+P
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QA 122
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ AA + GL +LH + +IYRDLK N++LD H K++DFG+ K + V+
Sbjct: 123 VFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VT 176
Query: 148 TR-VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
TR GT Y APE D +++GV+L E+L+G+ D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 30 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 89 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 142
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+ +G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 143 DFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 199 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 241
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 242 ADERPTFKILLSNI 255
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + + + E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 70 DHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
++L + +P P L + A ARG+EYL K I+RDL
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAAR 179
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSD 172
N+L+ K++DFGLA+ D H+ T G + APE T +SD
Sbjct: 180 NVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 173 VYSFGVVLLEILS 185
V+SFGV+L EI +
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 39 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 118
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 156
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNY 172
Query: 157 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
APE + D ++ GV++ E+++GR D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 12 VAIKQLDRNGV-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R+FL E ++ HPN+++L G +++ EYM GS++
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + G+ + + + G G++YL D + ++RDL NIL++ K+S
Sbjct: 120 FLRK-NDGRFTV--IQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVS 173
Query: 131 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFG++++ + D+ + G + APE + T SDV+S+G+V+ E++S
Sbjct: 174 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L N R+ L E +L ++HP+++ L G C+ LL+ EY GS+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 71 HLHD---LSPG-----------------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 110
L + + PG ++ L + A ++G++YL A+ ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLT 168
+RDL NIL+ G K+SDFGL++ V + R G + A E T
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 169 LKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP 228
+SDV+SFGV+L EI+ + + R +T H + + P
Sbjct: 231 TQSDVWSFGVLLWEIV--------TLGGNPYPGIPPERLFNLLKTGHRM--------ERP 274
Query: 229 PRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQK 267
+ + C ++PD RPV AD+ L + ++
Sbjct: 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 50 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 109 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 162
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+ +G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 163 DFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 219 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 261
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 262 ADERPTFKILLSNI 275
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 102
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A G+ YL D+ +++RDL N+L+ H
Sbjct: 103 YVREHKDNIGSQYLLNWCVQI------AEGMNYLEDRR---LVHRDLAARNVLVKTPQHV 153
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 213
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 214 SKPYDGIPASEISSIL 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 34 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 93 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+ +G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 147 DFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 202
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 203 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 245
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 246 ADERPTFKILLSNI 259
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ HPN+++L G +++ E+M GS++
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + G+ + + + G A G++YL D ++R L NIL++ K+S
Sbjct: 98 FLRQ-NDGQFTVI--QLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVS 151
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFGL++ + D+T T G + APE + + T SDV+S+G+V+ E++S
Sbjct: 152 DFGLSRF--LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLI----GYCADGDQRL 57
L L +DVA+K L R + + F + E + L+HP +V + G
Sbjct: 51 LRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 109
Query: 58 LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+V EY+ ++ D +H + P+ +++ A A + L + H +I+RD+K +
Sbjct: 110 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 118 NILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NI++ K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 177 GVVLLEILSG 186
G VL E+L+G
Sbjct: 223 GCVLYEVLTG 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 41 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 100 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 153
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+ +G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 154 DFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 209
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 210 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 252
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 253 ADERPTFKILLSNI 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMP 64
+ +L+ +K DR + R+ LVEV +HP +V L Y + +L L+ +++
Sbjct: 57 MKVLKKATLKVRDRVRTKMERDILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLR 109
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
G D LS + + + +A A L++LH +IYRDLK NILLD
Sbjct: 110 GG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEE 162
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
H KL+DFGL+K D+ + GT Y APE T +D +SFGV++ E+L
Sbjct: 163 GHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
Query: 185 SG 186
+G
Sbjct: 221 TG 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 39 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 122
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 156
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNY 176
Query: 157 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
APE + D ++ GV++ E+++GR D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 32/254 (12%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 35 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 94 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
DFGL++ V D+ + S+ +G+ + PE + + KSD+++FGV++ EI S G
Sbjct: 148 DFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
+ + + +A L++ P L + + + C HE+
Sbjct: 204 KMPYERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEK 246
Query: 247 PDMRPVIADVVTAL 260
D RP +++ +
Sbjct: 247 ADERPTFKILLSNI 260
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P P + +++A A G+ YL+ ++RDL N ++
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P P + +++A A G+ YL+ ++RDL N ++
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 164
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 165 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 26/251 (10%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
DVAIK + + G EF+ E ++ L H LV L G C ++ EYM G + +
Sbjct: 50 DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+L ++ + +++ +EYL K ++RDL N L++ K+S
Sbjct: 109 YLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVS 162
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKA 189
DFGL++ + D S + PE + + KSD+++FGV++ EI S G+
Sbjct: 163 DFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
Query: 190 VDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDM 249
+ + +A L++ P L + + + C HE+ D
Sbjct: 222 YERFTNSETAEHIAQGLRLYR----------PHLASE-------KVYTIMYSCWHEKADE 264
Query: 250 RPVIADVVTAL 260
RP +++ +
Sbjct: 265 RPTFKILLSNI 275
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 11 DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
DVAIK L + + + E + E ++ L +P +V LIG C + +LV E G
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP-- 421
Query: 70 DHLHDLSPGKKP-LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
LH GK+ + + ++ + G++YL +K ++R+L N+LL ++ K
Sbjct: 422 --LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAK 476
Query: 129 LSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+SDFGL+K LG D+++ + R G + + APE + + +SDV+S+GV + E LS
Sbjct: 477 ISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMP 64
+ +L+ +K DR + R+ LVEV +HP +V L Y + +L L+ +++
Sbjct: 58 MKVLKKATLKVRDRVRTKMERDILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLR 110
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
G D LS + + + +A A L++LH +IYRDLK NILLD
Sbjct: 111 GG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEE 163
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
H KL+DFGL+K D+ + GT Y APE T +D +SFGV++ E+L
Sbjct: 164 GHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 221
Query: 185 SG 186
+G
Sbjct: 222 TG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMP 64
+ +L+ +K DR + R+ LVEV +HP +V L Y + +L L+ +++
Sbjct: 57 MKVLKKATLKVRDRVRTKMERDILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLR 109
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
G D LS + + + +A A L++LH +IYRDLK NILLD
Sbjct: 110 GG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLG---IIYRDLKPENILLDEE 162
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
H KL+DFGL+K D+ + GT Y APE T +D +SFGV++ E+L
Sbjct: 163 GHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
Query: 185 SG 186
+G
Sbjct: 221 TG 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 10 QDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLI----GYCADGDQRLLVYE 61
+DVA+K L R + + F + E + L+HP +V + G +V E
Sbjct: 38 RDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
Y+ ++ D +H + P+ +++ A A + L + H +I+RD+K +NI++
Sbjct: 97 YVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 122 DRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS G VL
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 181 LEILSG 186
E+L+G
Sbjct: 210 YEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 10 QDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNLI----GYCADGDQRLLVYE 61
+DVA+K L R + + F + E + L+HP +V + G +V E
Sbjct: 38 RDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
Y+ ++ D +H + P+ +++ A A + L + H +I+RD+K +NI++
Sbjct: 97 YVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 122 DRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
K+ DFG+A+ + G++ + V+GT Y +PE A+ + +SDVYS G VL
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 181 LEILSG 186
E+L+G
Sbjct: 210 YEVLTG 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 165
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 167
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 161
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 167
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 168
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 169 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 12 VAIKQLDRNGV-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R+FL E ++ HPN+++L G +++ EYM GS++
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + G+ + + + G G++YL D + ++RDL NIL++ K+S
Sbjct: 105 FLRK-NDGRFTV--IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVS 158
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFG++++ + D+ + G + APE + T SDV+S+G+V+ E++S
Sbjct: 159 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 12 VAIKQLDRNGV-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R+FL E ++ HPN+++L G +++ EYM GS++
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + G+ + + + G G++YL D + ++RDL NIL++ K+S
Sbjct: 99 FLRK-NDGRFTV--IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVS 152
Query: 131 DFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
DFG++++ + D+ + G + APE + T SDV+S+G+V+ E++S
Sbjct: 153 DFGMSRV--LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+ VA+K++D Q EV+++ HH N+V++ GD+ +V E++ G++
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 70 DHLHDLSPGKKPLDWNTRMK------IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
D + +TRM + R L YLH++ VI+RD+K +ILL
Sbjct: 131 D-----------IVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTS 176
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
KLSDFG V ++GT + APE + D++S G++++E+
Sbjct: 177 DGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 184 LSG 186
+ G
Sbjct: 235 IDG 237
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 109
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 110 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 160
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 221 SKPYDGIPASEISSIL 236
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 219 SKPYDGIPASEISSIL 234
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 34/264 (12%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAI +L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 81 VAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 139
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 140 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 190
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFGLAKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 250
Query: 187 RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
K D A+ S++ L Q PP + C
Sbjct: 251 SKPYDGIPASEISSILEKGERLPQ-----------------PPICTIDVYMIMVKCWMID 293
Query: 247 PDMRPVIADVVTALAYLAS--QKY 268
D RP +++ + +A Q+Y
Sbjct: 294 ADSRPKFRELIIEFSKMARDPQRY 317
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N ++
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 196
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 197 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L++ + MP G + D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 107
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 219 SKPYDGIPASEISSIL 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 10 QDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
Q VAIK L ++ +G EF E ++ + L HPN+V L+G +++ Y G
Sbjct: 57 QAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 68 VEDHLHDLSPG------------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ + L SP K L+ + + A A G+EYL + V+++DL
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 172
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
N+L+ + K+SD GL + D + + + APE G+ ++ SD++S
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 232
Query: 176 FGVVLLEILS 185
+GVVL E+ S
Sbjct: 233 YGVVLWEVFS 242
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 105
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 106 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 156
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 217 SKPYDGIPASEISSIL 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
Query: 12 VAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L N + N+E L E +++ + P + L+G C +L V + MP G + D
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD 107
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
H+ + + L + A+G+ YL D +++RDL N+L+ H K++
Sbjct: 108 HVRE---NRGRLGSQDLLNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKIT 161
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKA 189
DFGLA+L + + + + + A E + T +SDV+S+GV + E+++ G K
Sbjct: 162 DFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
Query: 190 VD 191
D
Sbjct: 222 YD 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 107
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 108 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 219 SKPYDGIPASEISSIL 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK+L + + N+E L E +++ + +P++ L+G C +L+ + MP G + D
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLD 112
Query: 71 HL--HDLSPGKK-PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
++ H + G + L+W ++ A+G+ YL D+ +++RDL N+L+ H
Sbjct: 113 YVREHKDNIGSQYLLNWCVQI------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHV 163
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-G 186
K++DFG AKL + + + + A E T +SDV+S+GV + E+++ G
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 187 RKAVDTSKAAAEQSLV 202
K D A+ S++
Sbjct: 224 SKPYDGIPASEISSIL 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 10 QDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
Q VAIK L ++ +G EF E ++ + L HPN+V L+G +++ Y G
Sbjct: 40 QAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 68 VEDHLHDLSPG------------KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ + L SP K L+ + + A A G+EYL + V+++DL
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLA 155
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
N+L+ + K+SD GL + D + + + APE G+ ++ SD++S
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 215
Query: 176 FGVVLLEILS 185
+GVVL E+ S
Sbjct: 216 YGVVLWEVFS 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 116
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ +V
Sbjct: 117 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 114/275 (41%), Gaps = 35/275 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 69 EDHL----HDLSPGKKP------LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSN 118
+L ++ P K L + + A+G+E+L A I+RDL N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
Query: 119 ILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGV 178
ILL K+ DFGLA+ + + APE T++SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 179 VLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQAL 236
+L EI S G K E + R L + R R PE+ YQ +
Sbjct: 239 LLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQTM 284
Query: 237 AVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
C H +P RP +++V L L + D
Sbjct: 285 LD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK ++ R EFL E ++ + ++V L+G + G L++ E M G ++
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 71 HLHDLSPGKK------PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
+L L P + P + +++A A G+ YL+ ++RDL N +
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAED 161
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+ K+ DFG+ + D + + + +PE K G T SDV+SFGVVL EI
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 112
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ +V
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 116
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ +V
Sbjct: 117 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + ++L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQ----RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
EV L + H N++ IG G L+ + GS+ D L + WN
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNE 122
Query: 87 RMKIAAGAARGLEYLH-------DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGP 139
IA ARGL YLH D KP + +RD+K N+LL ++DFGLA
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 140 VGDNTHVSTRVMGTYGYCAPEYAKTG-----QLTLKSDVYSFGVVLLEILSGRKAVD 191
G + + +GT Y APE + L+ D+Y+ G+VL E+ S A D
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 122
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ +V
Sbjct: 123 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 145
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 146 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 206 WDQPSDSCQE 215
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 112
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ +V
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 39/263 (14%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 100 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + G+ G+ Y APE + + + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 181 LEILSGRKAVDTS--KAAAEQSLVAWARPLF------QDRTRHSLIADPELQGQYPPRGF 232
++SG D K E+ L R F ++ + LI +P +G
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE---- 259
Query: 233 YQALAVAAMCV-HEQPDMRPVIA 254
Q + M V HE +++P +A
Sbjct: 260 -QIMKDRWMNVGHEDDELKPYVA 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 37/277 (13%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NILL K+ DFGLA+ + + APE T++SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 177 GVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQ 234
GV+L EI S G K E + R L + R R PE+ YQ
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQ 282
Query: 235 ALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
+ C H +P RP +++V L L + D
Sbjct: 283 TMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 471
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 472 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 526
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 472
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 473 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 527
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSXQE 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 37/277 (13%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NILL K+ DFGLA+ + + APE T++SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 177 GVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQ 234
GV+L EI S G K E + R L + R R PE+ YQ
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQ 273
Query: 235 ALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
+ C H +P RP +++V L L + D
Sbjct: 274 TMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 12 VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L +R + E+ +++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NILL K+ DFGLA+ + + APE T++SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 177 GVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQ 234
GV+L EI S G K E + R L + R R PE+ YQ
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQ 273
Query: 235 ALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
+ C H +P RP +++V L L + D
Sbjct: 274 TMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 232
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 293 VLMWEIFT 300
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + RE L+ E+ +LS L +H N+VNL+G C G L++ EY G +
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 70 DHLH---------DLSPG-----KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ L SP + LD + + A+G+ +L K I+RDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLA 195
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL G K+ DFGLA+ N V + APE T +SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 176 FGVVLLEILS 185
+G+ L E+ S
Sbjct: 256 YGIFLWELFS 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 119
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 120 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 174
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 146
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 207 WDQPSDSCQE 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 129
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 184
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 129
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 184
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 12 VAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K +D + V E+ + +L+H N+V G+ +G+ + L EY G + D
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ +P ++ AG YLH + +RD+K N+LLD + K+S
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKIS 147
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGRKA 189
DFGLA + + + ++ GT Y APE K + + DV+S G+VL +L+G
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
Query: 190 VDTSKAAAEQ 199
D + ++
Sbjct: 208 WDQPSDSCQE 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 127
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 128 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 182
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 29 LVEVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 87
+ E +LSL +HP L L D+ V E++ G + H+ + D
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARA 126
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
AA L +LHDK +IYRDLK N+LLD H KL+DFG+ K G N +
Sbjct: 127 RFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTT 181
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT Y APE + D ++ GV+L E+L G
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK L + R +FL E ++ H N++ L G + +++ EYM G+++
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L + L ++ G A G++YL A ++RDL NIL++ K+S
Sbjct: 136 FLREKDGEFSVLQLVGMLR---GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVS 189
Query: 131 DFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
DFGL+++ + D+ + G + APE + T SDV+SFG+V+ E+++
Sbjct: 190 DFGLSRV--LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP-----PRGFYQALAVAAMC 242
+ RP + + + H ++ + P P YQ + C
Sbjct: 248 E-----------------RP-YWELSNHEVMKAINDGFRLPTPMDCPSAIYQLM---MQC 286
Query: 243 VHEQPDMRPVIADVVTAL 260
++ RP AD+V+ L
Sbjct: 287 WQQERARRPKFADIVSIL 304
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + RE L+ E+ +LS L +H N+VNL+G C G L++ EY G +
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 70 DHLH---------DLSPG-----KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ L SP + LD + + A+G+ +L K I+RDL
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLA 188
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL G K+ DFGLA+ N V + APE T +SDV+S
Sbjct: 189 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 248
Query: 176 FGVVLLEILS 185
+G+ L E+ S
Sbjct: 249 YGIFLWELFS 258
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTAR 173
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 234 VLMWEIFT 241
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 107
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 108 -IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 162
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 109
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 110 -IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 164
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + RE L+ E+ +LS L +H N+VNL+G C G L++ EY G +
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 70 DHLH---------DLSPG-----KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ L SP + LD + + A+G+ +L K I+RDL
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLA 190
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL G K+ DFGLA+ N V + APE T +SDV+S
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 250
Query: 176 FGVVLLEILS 185
+G+ L E+ S
Sbjct: 251 YGIFLWELFS 260
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 113
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K D +
Sbjct: 114 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYY 168
Query: 147 STRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ G + + APE + + KSDV+SFGV++ E S
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 112
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ V
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 178
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 239 VLMWEIFT 246
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + RE L+ E+ +LS L +H N+VNL+G C G L++ EY G +
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 70 DHLH---------DLSPG-----KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ L SP + LD + + A+G+ +L K I+RDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLA 195
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL G K+ DFGLA+ N V + APE T +SDV+S
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 255
Query: 176 FGVVLLEILS 185
+G+ L E+ S
Sbjct: 256 YGIFLWELFS 265
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 37/277 (13%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSF 176
NILL K+ DFGLA+ + + APE T++SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 177 GVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQ 234
GV+L EI S G K E + R L + R R PE+ YQ
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQ 282
Query: 235 ALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
+ C H +P RP +++V L L + D
Sbjct: 283 TMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
+F+ EV + L H NL+ L G ++ V E PLGS+ D L G L T
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GT 122
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
+ A A G+ YL K I+RDL N+LL K+ DFGL + P D+ V
Sbjct: 123 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 147 STRVMGT-YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+ +CAPE KT + SD + FGV L E+ +
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 175
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 236 VLMWEIFT 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 69 EDHL----HDLSPGKKP--------LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKC 116
+L ++ P K+ L + + A+G+E+L A I+RDL
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL K+ DFGLA+ D +V + APE T++SDV+S
Sbjct: 179 RNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 237
Query: 176 FGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFY 233
FGV+L EI S G K E + R L + R R PE+ Y
Sbjct: 238 FGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------Y 283
Query: 234 QALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
Q + C H +P RP +++V L L + D
Sbjct: 284 QTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 87
+VE +L+L P + + C RL V EY+ G + H+ + K+P
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HA 444
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ AA A GL +L K +IYRDLK N++LD H K++DFG+ K + D V+
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VT 498
Query: 148 TRVM-GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T+ GT Y APE D ++FGV+L E+L+G+
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + RE L+ E+ +LS L +H N+VNL+G C G L++ EY G +
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 70 DHLH---------DLSPG-----KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ L SP + LD + + A+G+ +L K I+RDL
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLA 172
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL G K+ DFGLA+ N V + APE T +SDV+S
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 176 FGVVLLEILS 185
+G+ L E+ S
Sbjct: 233 YGIFLWELFS 242
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 39/278 (14%)
Query: 12 VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L +R + E+ +++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL K+ DFGLA+ D +V + APE T++SDV+S
Sbjct: 214 RNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 272
Query: 176 FGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFY 233
FGV+L EI S G K E + R L + R R PE+ Y
Sbjct: 273 FGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------Y 318
Query: 234 QALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
Q + C H +P RP +++V L L + D
Sbjct: 319 QTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 41 REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGE 100
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 101 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLL 147
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + VG+ G+ Y APE + + + DV+S GV+L
Sbjct: 148 DGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 181 LEILSGRKAVD 191
++SG D
Sbjct: 205 YTLVSGSLPFD 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 12 VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 69 EDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDLKC 116
+L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 117 SNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDVYS 175
NILL K+ DFGLA+ D +V + APE T++SDV+S
Sbjct: 177 RNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 176 FGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFY 233
FGV+L EI S G K E + R L + R R PE+ Y
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------Y 281
Query: 234 QALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
Q + C H +P RP +++V L L + D
Sbjct: 282 QTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 27 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNT 86
E L E ++ L +P +V +IG C + + +LV E LG + +L + D N
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 113
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH- 145
+++ + G++YL + ++RDL N+LL ++ K+SDFGL+K +N +
Sbjct: 114 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 146 VSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
T + APE + + KSDV+SFGV++ E S
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 119/280 (42%), Gaps = 39/280 (13%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLG 66
+ VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 67 SVEDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDL 114
++ +L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 115 KCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDV 173
NILL K+ DFGLA+ D +V + APE T++SDV
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 174 YSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRG 231
+SFGV+L EI S G K E + R L + R R PE+
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM-------- 271
Query: 232 FYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
YQ + C H +P RP +++V L L + D
Sbjct: 272 -YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 119/280 (42%), Gaps = 39/280 (13%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLG 66
+ VA+K L L+ L ++ + HH N+VNL+G C G +++ E+ G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 67 SVEDHL---------HDLSPGKKPLDWNTRMKI---AAGAARGLEYLHDKAKPPVIYRDL 114
++ +L + ++P D+ T + + A+G+E+L A I+RDL
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 115 KCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDV 173
NILL K+ DFGLA+ D +V + APE T++SDV
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 174 YSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRG 231
+SFGV+L EI S G K E + R L + R R PE+
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM-------- 271
Query: 232 FYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 271
YQ + C H +P RP +++V L L + D
Sbjct: 272 -YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VAIK +D+ + ++ EV ++ +L+HPN+V L L+ EY G
Sbjct: 38 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 97
Query: 68 VEDHLHDLSPGK-KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
V D+L ++ G+ K + ++ + A ++Y H K +++RDLK N+LLD +
Sbjct: 98 VFDYL--VAHGRMKEKEARSKFRQIVSA---VQYCHQKR---IVHRDLKAENLLLDADMN 149
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLLEILS 185
K++DFG + VG G+ Y APE + + + DV+S GV+L ++S
Sbjct: 150 IKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 186 GRKAVD 191
G D
Sbjct: 207 GSLPFD 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 87
+VE +L+L P + + C RL V EY+ G + H+ + K+P
Sbjct: 68 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HA 123
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ AA A GL +L K +IYRDLK N++LD H K++DFG+ K + D V+
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VT 177
Query: 148 TRVM-GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T+ GT Y APE D ++FGV+L E+L+G+
Sbjct: 178 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH--LHDLSPGKKPLDWNTRM 88
E+ +L L H NLVNL+ C + LV+E++ DH L DL LD+
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQ 127
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL----GPVGDNT 144
K G+ + H +I+RD+K NIL+ + KL DFG A+ G V D+
Sbjct: 128 KYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD- 183
Query: 145 HVSTRVMGTYGYCAPEY----AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAE-- 198
V+TR Y APE K G+ DV++ G ++ E+ G +
Sbjct: 184 EVATR-----WYRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
Query: 199 ------QSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALA-----VAAMCVHEQP 247
+L+ + LF + + PE++ + P Y L+ +A C+H P
Sbjct: 236 HIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295
Query: 248 DMRPVIADVV 257
D RP A+++
Sbjct: 296 DKRPFCAELL 305
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 54 DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
D LV M G ++ H++ + G+ + AA GLE LH + ++YRD
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRD 311
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDV 173
LK NILLD H ++SD GLA P G + RV GT GY APE K + T D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDW 368
Query: 174 YSFGVVLLEILSGRKAVDTSKAAAEQSLV 202
++ G +L E+++G+ K ++ V
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 54 DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRD 113
D LV M G ++ H++ + G+ + AA GLE LH + ++YRD
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRD 311
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDV 173
LK NILLD H ++SD GLA P G + RV GT GY APE K + T D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDW 368
Query: 174 YSFGVVLLEILSGRKAVDTSKAAAEQSLV 202
++ G +L E+++G+ K ++ V
Sbjct: 369 WALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 100 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + G+ G+ Y APE + + + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 181 LEILSGRKAVD 191
++SG D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 10 QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNL------IGYCADGDQRLLVYEY 62
+ VAIKQ + NRE + +E+ ++ L+HPN+V+ + A D LL EY
Sbjct: 41 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 63 MPLGSVEDHLHDLSP--GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
G + +L+ G K T + + A R YLH+ +I+RDLK NI+
Sbjct: 101 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR---YLHENR---IIHRDLKPENIV 154
Query: 121 LDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
L G K+ D G AK D + T +GT Y APE + + T+ D +SFG
Sbjct: 155 LQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 178 VVLLEILSG 186
+ E ++G
Sbjct: 212 TLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 10 QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNL------IGYCADGDQRLLVYEY 62
+ VAIKQ + NRE + +E+ ++ L+HPN+V+ + A D LL EY
Sbjct: 40 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 63 MPLGSVEDHLHDLSP--GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
G + +L+ G K T + + A R YLH+ +I+RDLK NI+
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR---YLHENR---IIHRDLKPENIV 153
Query: 121 LDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
L G K+ D G AK D + T +GT Y APE + + T+ D +SFG
Sbjct: 154 LQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 178 VVLLEILSG 186
+ E ++G
Sbjct: 211 TLAFECITG 219
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ +++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 35/266 (13%)
Query: 12 VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L +R + E+ +++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 69 EDHL----HDLSPGKK----PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
+L ++ P K L + + A+G+E+L A I+RDL NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 121 LDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVV 179
L K+ DFGLA+ D +V + APE T++SDV+SFGV+
Sbjct: 177 LSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 180 LLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQALA 237
L EI S G K E + R L + R R PE+ YQ +
Sbjct: 236 LWEIFSLGASPYPGVKIDEE-----FXRRLKEGTRMRAPDYTTPEM---------YQTML 281
Query: 238 VAAMCVHEQPDMRPVIADVVTALAYL 263
C H +P RP +++V L L
Sbjct: 282 D---CWHGEPSQRPTFSELVEHLGNL 304
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 6 LCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMP 64
+ +L+ +K DR + R+ L +V +HP +V L Y + +L L+ +++
Sbjct: 61 MKVLKKATLKVRDRVRTKMERDILADV------NHPFVVKL-HYAFQTEGKLYLILDFLR 113
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG 124
G D LS + + + +A A GL++LH +IYRDLK NILLD
Sbjct: 114 GG---DLFTRLSKEVMFTEEDVKFYLAE-LALGLDHLHSLG---IIYRDLKPENILLDEE 166
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
H KL+DFGL+K D+ + GT Y APE + +D +S+GV++ E+L
Sbjct: 167 GHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEML 224
Query: 185 SG--------RKAVDT----SKAAAEQSLVAWA----RPLFQDRTRHSLIADPELQGQYP 228
+G RK T +K Q L A R LF+ + L + P+ +
Sbjct: 225 TGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIK 284
Query: 229 PRGFYQALAVAAMCVHE-QPDMRPVIA 254
FY + + E +P +P +A
Sbjct: 285 RHVFYSTIDWNKLYRREIKPPFKPAVA 311
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VAIK +D+ + ++ EV ++ +L+HPN+V L L+ EY G
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 68 VEDHLHDLSPGK-KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
V D+L ++ G+ K + ++ + A ++Y H K +++RDLK N+LLD +
Sbjct: 101 VFDYL--VAHGRMKEKEARSKFRQIVSA---VQYCHQKR---IVHRDLKAENLLLDADMN 152
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLLEILS 185
K++DFG + VG G Y APE + + + DV+S GV+L ++S
Sbjct: 153 IKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 186 GRKAVD 191
G D
Sbjct: 210 GSLPFD 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 12 VAIK--QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR-----LLVYEYMP 64
VA+K +LD + + EFL E + HPN++ L+G C + + +++ +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 65 LGSVEDHL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + +L L G K + T +K A G+EYL ++ ++RDL N +L
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLR 181
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
++DFGL+K GD + A E T KSDV++FGV + E
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE 241
Query: 183 I 183
I
Sbjct: 242 I 242
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 110
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 111 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 166
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T GT Y APE + D + GVV+ E++ GR
Sbjct: 167 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 35/266 (13%)
Query: 12 VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLVNLIGYCAD-GDQRLLVYEYMPLGSV 68
VA+K L +R + E+ +++ + HH N+VNL+G C G +++ E+ G++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 69 EDHL----HDLSPGKK----PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
+L ++ P K L + + A+G+E+L A I+RDL NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 121 LDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVV 179
L K+ DFGLA+ D +V + APE T++SDV+SFGV+
Sbjct: 177 LSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 180 LLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADPELQGQYPPRGFYQALA 237
L EI S G K E + R L + R R PE+ YQ +
Sbjct: 236 LWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTPEM---------YQTML 281
Query: 238 VAAMCVHEQPDMRPVIADVVTALAYL 263
C H +P RP +++V L L
Sbjct: 282 D---CWHGEPSQRPTFSELVEHLGNL 304
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 100 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + G+ G Y APE + + + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 181 LEILSGRKAVD 191
++SG D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
L E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRA 250
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A L+YLH ++ V+YRDLK N++LD+ H K++DFGL K G + D +
Sbjct: 251 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMK 307
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T GT Y APE + D + GVV+ E++ GR
Sbjct: 308 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
L E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRA 253
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A L+YLH ++ V+YRDLK N++LD+ H K++DFGL K G + D +
Sbjct: 254 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMK 310
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T GT Y APE + D + GVV+ E++ GR
Sbjct: 311 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 8 LLQD-VAIKQL---DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGD----QRLLV 59
L+ D VA+K D+ Q RE + + H NL+ I G + L+
Sbjct: 36 LMNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEKRGSNLEVELWLI 91
Query: 60 YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA--------KPPVIY 111
+ GS+ D+L + WN +A +RGL YLH+ KP + +
Sbjct: 92 TAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 112 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-----Q 166
RD K N+LL L+DFGLA G + +GT Y APE +
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRD 206
Query: 167 LTLKSDVYSFGVVLLEILSGRKAVD 191
L+ D+Y+ G+VL E++S KA D
Sbjct: 207 AFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA++ +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 100 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + G+ G+ Y APE + + + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 181 LEILSGRKAVD 191
++SG D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA++ +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAAR------GLEYLHDKAKPPVIYRDLKCSNILL 121
V D+L ++ G RMK A+ ++Y H K +++RDLK N+LL
Sbjct: 100 VFDYL--VAHG--------RMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVL 180
D + K++DFG + G+ G+ Y APE + + + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 181 LEILSGRKAVD 191
++SG D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 107
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 108 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T GT Y APE + D + GVV+ E++ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 34/189 (17%)
Query: 24 GNREFLVE---VLMLSLLHHPNLVNLI----GYCADGD-QRLLVYEYMPLGSVEDHLHDL 75
NR+ + + + L+ H N+ I ADG + LLV EY P GS+ +L
Sbjct: 47 ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--- 103
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLH------DKAKPPVIYRDLKCSNILLDRGYHPKL 129
DW + ++A RGL YLH D KP + +RDL N+L+ +
Sbjct: 104 --SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161
Query: 130 SDFGLA------KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS--------DVYS 175
SDFGL+ +L G+ + + +GT Y APE + G + L+ D+Y+
Sbjct: 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYA 220
Query: 176 FGVVLLEIL 184
G++ EI
Sbjct: 221 LGLIYWEIF 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 15 KQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD 74
K ++RN V R E+ ++ L HP LVNL D + +V + + G + HL
Sbjct: 52 KCVERNEV---RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108
Query: 75 LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGL 134
K+ T L+YL ++ +I+RD+K NILLD H ++DF +
Sbjct: 109 NVHFKE----ETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNI 161
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYA---KTGQLTLKSDVYSFGVVLLEILSGRKAVD 191
A + P T ++T + GT Y APE K + D +S GV E+L GR+
Sbjct: 162 AAMLP--RETQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
Query: 192 TSKAAAEQSLV 202
+ + + +V
Sbjct: 219 IRSSTSSKEIV 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 31/258 (12%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + + ++ EV ++ +L+HPN+V L LV EY G
Sbjct: 33 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 68 VEDHL--HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
V D+L H K+ R K ++Y H K +++RDLK N+LLD
Sbjct: 93 VFDYLVAHGWMKEKE-----ARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADM 143
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLLEIL 184
+ K++DFG + G+ G+ Y APE + + + DV+S GV+L ++
Sbjct: 144 NIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 200
Query: 185 SGRKAVDTS--KAAAEQSLVAWARPLF------QDRTRHSLIADPELQGQYPPRGFYQAL 236
SG D K E+ L R F ++ + LI +P +G Q +
Sbjct: 201 SGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE-----QIM 255
Query: 237 AVAAMCV-HEQPDMRPVI 253
M V HE +++P +
Sbjct: 256 KDRWMNVGHEDDELKPYV 273
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 107
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 108 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
T GT Y APE + D + GVV+ E++ GR
Sbjct: 164 T-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 10 QDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
Q+ A+K +++ + L EV +L L HPN++ L D +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRG 124
+ D + +K + +I G+ Y+H K +++RDLK NILL ++
Sbjct: 108 LFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKD 160
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFGL+ NT + R+ GT Y APE + G K DV+S GV+L +L
Sbjct: 161 CDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILL 216
Query: 185 SG 186
SG
Sbjct: 217 SG 218
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N+++L+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K +D + +++VE+ +L+ HPN+V L+ + ++ E+ G+V+ +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 132
+L ++PL + + L YLHD +I+RDLK NIL KL+DF
Sbjct: 126 LEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 133 GLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AKTGQLTLKSDVYSFGVVLLEI 183
G++ NT R +GT + APE +K K+DV+S G+ L+E+
Sbjct: 180 GVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ Y G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++ L+G C ++ EY G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 17/178 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L + K + K+
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKE----AKRIPEEILGKV 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+ RGL YL +K + +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 120 SIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 173
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPL 208
+GT Y APE + +++SD++S G+ L+E+ GR + A +++ + RP+
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI--FGRPV 229
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K +D + +++VE+ +L+ HPN+V L+ + ++ E+ G+V+ +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 132
+L ++PL + + L YLHD +I+RDLK NIL KL+DF
Sbjct: 126 LEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 133 GLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AKTGQLTLKSDVYSFGVVLLEI 183
G++ NT R +GT + APE +K K+DV+S G+ L+E+
Sbjct: 180 GVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K +D + +++VE+ +L+ HPN+V L+ + ++ E+ G+V+ +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 132
+L ++PL + + L YLHD +I+RDLK NIL KL+DF
Sbjct: 126 LEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 133 GLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AKTGQLTLKSDVYSFGVVLLEI 183
G++ NT R +GT + APE +K K+DV+S G+ L+E+
Sbjct: 180 GVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S L+H N+V IG R ++ E M G ++
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 185 S 185
S
Sbjct: 241 S 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 10 QDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
Q+ A+K +++ + L EV +L L HPN++ L D +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRG 124
+ D + +K + +I G+ Y+H K +++RDLK NILL ++
Sbjct: 108 LFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKD 160
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFGL+ NT + R+ GT Y APE + G K DV+S GV+L +L
Sbjct: 161 CDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILL 216
Query: 185 SG 186
SG
Sbjct: 217 SG 218
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 13 AIKQLDRNGVQ--GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
AIK + + V N + L EV +L LL HPN++ L + D LV E G + D
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--- 127
+ + + I G+ YLH K +++RDLK N+LL+
Sbjct: 126 EI----IHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALI 178
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
K+ DFGL+ V +N +GT Y APE + + K DV+S GV+L +L+G
Sbjct: 179 KIVDFGLS---AVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 32/259 (12%)
Query: 7 CLLQDV-----AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYE 61
CLL V ++ D + + + E+ +L L+HPN++ + ++ +V E
Sbjct: 53 CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
G + + K+ + T K LE++H + V++RD+K +N+ +
Sbjct: 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFI 169
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
KL D GL + T + ++GT Y +PE KSD++S G +L
Sbjct: 170 TATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 227
Query: 182 EILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPP---RGFYQAL-A 237
E+ AA QS P + D+ + Q YPP + + L
Sbjct: 228 EM------------AALQS------PFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 238 VAAMCVHEQPDMRPVIADV 256
+ MC++ P+ RP + V
Sbjct: 270 LVNMCINPDPEKRPDVTYV 288
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 10 QDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
Q+ A+K +++ + L EV +L L HPN++ L D +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRG 124
+ D + +K + +I G+ Y+H K +++RDLK NILL ++
Sbjct: 108 LFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKD 160
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFGL+ NT + R+ GT Y APE + G K DV+S GV+L +L
Sbjct: 161 CDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILL 216
Query: 185 SG 186
SG
Sbjct: 217 SG 218
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S L+H N+V IG R ++ E M G ++
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 185 S 185
S
Sbjct: 255 S 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 13/185 (7%)
Query: 10 QDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
++VA+K +D+ + + ++ EV + +L+HPN+V L LV EY G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
V D+L ++ G+ + R K ++Y H K +++RDLK N+LLD +
Sbjct: 100 VFDYL--VAHGRXK-EKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADXNI 152
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLLEILSG 186
K++DFG + G+ G Y APE + + + DV+S GV+L ++SG
Sbjct: 153 KIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 187 RKAVD 191
D
Sbjct: 210 SLPFD 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
VA+K L + + + LV E+ M+ ++ H N++NL+G C ++ Y G++
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 70 DHLHDLSP---------GKKPLDWNTRMKIAAGA---ARGLEYLHDKAKPPVIYRDLKCS 117
++L P + P + T + + ARG+EYL A I+RDL
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAAR 186
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFG 177
N+L+ K++DFGLA+ D +T + APE T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 178 VVLLEILS 185
V++ EI +
Sbjct: 247 VLMWEIFT 254
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLV-YE 61
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L +C D++L
Sbjct: 59 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLS 117
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
Y G + ++ + D A LEYLH K +I+RDLK NILL
Sbjct: 118 YAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL 170
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
+ H +++DFG AK+ + +GT Y +PE SD+++ G ++
Sbjct: 171 NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 230
Query: 182 EILSG 186
++++G
Sbjct: 231 QLVAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EYMP G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + K+
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EYMP G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + K+
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 206
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 185 S 185
S
Sbjct: 267 S 267
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K +D + +++VE+ +L+ HPN+V L+ + ++ E+ G+V+ +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 132
+L ++PL + + L YLHD +I+RDLK NIL KL+DF
Sbjct: 99 LEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 152
Query: 133 GLAKLGPVGDNTHVSTR----VMGTYGYCAPEY-----AKTGQLTLKSDVYSFGVVLLEI 183
G++ NT + +GT + APE +K K+DV+S G+ L+E+
Sbjct: 153 GVS-----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 185 S 185
S
Sbjct: 240 S 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 196
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 197 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 185 S 185
S
Sbjct: 257 S 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 185 S 185
S
Sbjct: 241 S 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 186
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 187 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 185 S 185
S
Sbjct: 247 S 247
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 185 S 185
S
Sbjct: 240 S 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 185 S 185
S
Sbjct: 255 S 255
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
H +++DFG AK L P ++ V GT Y +PE + SD+++ G ++
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSASKSSDLWALGCIIY 225
Query: 182 EILSG 186
++++G
Sbjct: 226 QLVAG 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 112
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 113 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 168
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 169 X-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 171
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 172 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
Query: 185 S 185
S
Sbjct: 232 S 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 107
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 108 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 164 X-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 107
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 108 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 164 X-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 181 RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 185 S 185
S
Sbjct: 241 S 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +LS + G G + ++ EY+ GS D L P D +
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIATM 125
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL+YLH + K I+RD+K +N+LL KL+DFG+A G + D
Sbjct: 126 LKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTF 180
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT + APE + K+D++S G+ +E+ G
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
+ E +L HP L L D+ V EY G + HL ++ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERA 107
Query: 89 KI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ A LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D +
Sbjct: 108 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMK 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 164 X-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 185 S 185
S
Sbjct: 255 S 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 12 VAIKQLDRNGVQGNR---EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
VA+K L+R ++ + E+ L L HP+++ L + +V EY+ G +
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D++ G+ LD ++ G++Y H + V++RDLK N+LLD + K
Sbjct: 104 FDYI--CKNGR--LDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAK 156
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + D++S GV+L +L G
Sbjct: 157 IADFGLSNMMSDGEFLRXSC---GSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
Query: 187 RKAVD 191
D
Sbjct: 213 TLPFD 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 31 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 90
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 91 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 143
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 203
Query: 183 ILSG 186
+++G
Sbjct: 204 LVAG 207
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V +E L E +L ++ P LV L D +V EY P G +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFGLAK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 32 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 91
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 92 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 144
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 145 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 204
Query: 183 ILSG 186
+++G
Sbjct: 205 LVAG 208
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 197
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 198 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
Query: 185 S 185
S
Sbjct: 258 S 258
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 15 KQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSVED 70
K+LD + + ++ LV EV +L L HPN+V D L V EY G +
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK--PPVIYRDLKCSNILLDRGYHPK 128
+ + ++ LD +++ L+ H ++ V++RDLK +N+ LD + K
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
L DFGLA++ + +T + +GT Y +PE KSD++S G +L E+
Sbjct: 157 LGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 30 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 89
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 90 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 142
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 202
Query: 183 ILSG 186
+++G
Sbjct: 203 LVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 29 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 88
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 89 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 141
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 201
Query: 183 ILSG 186
+++G
Sbjct: 202 LVAG 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
L E +L HP L L D+ V EY G + HL ++ +
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRAR 112
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
A L+YLH ++ V+YRDLK N++LD+ H K++DFGL K G + D +
Sbjct: 113 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX 169
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 170 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 12 VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K L + Q +FL+E L++S +H N+V IG R ++ E M G ++
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 71 HLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RG 124
L + P L + +A A G +YL + I+RD+ N LL G
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 220
Query: 125 YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
K+ DFG+A+ M + PE G T K+D +SFGV+L EI
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
Query: 185 S 185
S
Sbjct: 281 S 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
L E +L HP L L D+ V EY G + HL ++ +
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRAR 113
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
A L+YLH ++ V+YRDLK N++LD+ H K++DFGL K G + D +
Sbjct: 114 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX 170
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 171 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 55 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 114
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 115 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 167
Query: 123 RGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
H +++DFG AK L P ++ V GT Y +PE SD+++ G ++
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 182 EILSG 186
++++G
Sbjct: 227 QLVAG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 52 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 112 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 164
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 183 ILSG 186
+++G
Sbjct: 225 LVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 52 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 112 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 164
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 183 ILSG 186
+++G
Sbjct: 225 LVAG 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
L E +L HP L L D+ V EY G + HL ++ +
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRAR 111
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
A L+YLH ++ V+YRDLK N++LD+ H K++DFGL K G + D +
Sbjct: 112 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX 168
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
GT Y APE + D + GVV+ E++ GR
Sbjct: 169 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 15 KQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSVED 70
K+LD + + ++ LV EV +L L HPN+V D L V EY G +
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK--PPVIYRDLKCSNILLDRGYHPK 128
+ + ++ LD +++ L+ H ++ V++RDLK +N+ LD + K
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
L DFGLA++ + +T + +GT Y +PE KSD++S G +L E+
Sbjct: 157 LGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 183 ILSG 186
+++G
Sbjct: 227 LVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 52 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 112 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 164
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 183 ILSG 186
+++G
Sbjct: 225 LVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 55 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 114
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 115 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 167
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 227
Query: 183 ILSG 186
+++G
Sbjct: 228 LVAG 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQ 226
Query: 183 ILSG 186
+++G
Sbjct: 227 LVAG 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 91/166 (54%), Gaps = 15/166 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 130
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 131 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 182
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAA 196
+GT Y +PE + +++SD++S G+ L+E+ GR + + +
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 183 ILSG 186
+++G
Sbjct: 227 LVAG 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 138
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 139 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 190
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 183 ILSG 186
+++G
Sbjct: 227 LVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 54 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 114 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 226
Query: 183 ILSG 186
+++G
Sbjct: 227 LVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 52 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 112 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 164
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224
Query: 183 ILSG 186
+++G
Sbjct: 225 LVAG 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 26 REFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
+ + E+ +L + P +V G + +DG+ + + E+M GS++ L G+ P
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQI 167
Query: 85 NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNT 144
++ IA +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+
Sbjct: 168 LGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS- 220
Query: 145 HVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
++ +GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 221 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 6 LCLLQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
L ++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y
Sbjct: 57 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 116
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
G + ++ + D A LEYLH K +I+RDLK NILL+
Sbjct: 117 AKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLN 169
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
H +++DFG AK+ + +GT Y +PE SD+++ G ++ +
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 229
Query: 183 ILSG 186
+++G
Sbjct: 230 LVAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 10 QDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLG 66
++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y G
Sbjct: 40 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 99
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ ++ + D A LEYLH K +I+RDLK NILL+ H
Sbjct: 100 ELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMH 152
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+++DFG AK+ + +GT Y +PE SD+++ G ++ ++++G
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 10 QDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLG 66
++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y G
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ ++ + D A LEYLH K +I+RDLK NILL+ H
Sbjct: 115 ELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMH 167
Query: 127 PKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
+++DFG AK L P ++ V GT Y +PE SD+++ G ++ ++++
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
Query: 186 G 186
G
Sbjct: 227 G 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + K+
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGD----QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
E+ L+ H N++ I G Q L+ +Y GS+ D+L + LD
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAK 134
Query: 86 TRMKIAAGAARGLEYLHD-----KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 140
+ +K+A + GL +LH + KP + +RDLK NIL+ + ++D GLA + +
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFI 193
Query: 141 GDNTHV----STRVMGTYGYCAPEYAKTG------QLTLKSDVYSFGVVLLEI 183
D V +TRV GT Y PE Q + +D+YSFG++L E+
Sbjct: 194 SDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V +E L E +L ++ P LV L D +V EY P G +
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFGLAK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 5 ILCLLQD------VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLL 58
I+CL ++ VA+K +D Q EV+++ H N+V + G++ +
Sbjct: 60 IVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWV 119
Query: 59 VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSN 118
+ E++ G++ D + + ++ + + + L YLH + VI+RD+K +
Sbjct: 120 LMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG---VIHRDIKSDS 171
Query: 119 ILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGV 178
ILL KLSDFG + + ++GT + APE + D++S G+
Sbjct: 172 ILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 179 VLLEILSG 186
+++E++ G
Sbjct: 230 MVIEMVDG 237
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 114
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D ++
Sbjct: 115 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEF 166
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 10 QDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLG 66
++ AIK L+ R+ ++ N+ V E ++S L HP V L D ++ Y G
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ ++ + D A LEYLH K +I+RDLK NILL+ H
Sbjct: 115 ELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMH 167
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+++DFG AK+ + +GT Y +PE SD+++ G ++ ++++G
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 111
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 112 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 163
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 26 REFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
+ + E+ +L + P +V G + +DG+ + + E+M GS++ L G+ P
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQI 105
Query: 85 NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNT 144
++ IA +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+
Sbjct: 106 LGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS- 158
Query: 145 HVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
++ +GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 111
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 112 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 163
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 111
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 112 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 163
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 35 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 111
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 112 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 163
Query: 151 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
+GT Y +PE + +++SD++S G+ L+E+ GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 44/265 (16%)
Query: 2 MQVILCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGY---CADGDQRL- 57
++V C LQD + + +R + F E L L HPN+V G + +
Sbjct: 52 VEVAWCELQDRKLTKSER------QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIV 105
Query: 58 LVYEYMPLGSVEDHLHDLSPGKKPL--DWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G+++ +L K + W ++ +GL++LH + PP+I+RDLK
Sbjct: 106 LVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRT-PPIIHRDLK 158
Query: 116 CSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVY 174
C NI + K+ D GLA L + V+GT + APE + + DVY
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-KYDESVDVY 213
Query: 175 SFGVVLLEILSGRKAVDTSKAAAE--QSLVAWARPLFQDRTRHSLIADPELQGQYPPRGF 232
+FG LE + + AA+ + + + +P D+ +A PE++
Sbjct: 214 AFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK-----VAIPEVK-------- 260
Query: 233 YQALAVAAMCVHEQPDMRPVIADVV 257
+ C+ + D R I D++
Sbjct: 261 ----EIIEGCIRQNKDERYSIKDLL 281
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 8 LLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
+++++ I ++ + +R EV +L+ + HPN+V + +V +Y G
Sbjct: 53 VIKEINISRMSSKEREESRR---EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGD 109
Query: 68 VEDHLHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
+ ++ L + LDW ++ +A L+++HD+ +++RD+K NI L +
Sbjct: 110 LFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK---ILHRDIKSQNIFLTK 160
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
+L DFG+A++ + ++ +GT Y +PE + KSD+++ G VL E+
Sbjct: 161 DGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 184 LSGRKAVDT 192
+ + A +
Sbjct: 219 CTLKHAFEA 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 13 AIKQLDRNGVQGNREFL-VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
IK ++++ Q E + E+ +L L HPN++ + D +V E G + +
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL-DRGYHP--K 128
+ K L ++ L Y H + V+++DLK NIL D H K
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIK 167
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ DFGLA+L ++ ST GT Y APE K +T K D++S GVV+ +L+G
Sbjct: 168 IIDFGLAELFKSDEH---STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 237
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 238 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 284
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 285 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 186 G 186
G
Sbjct: 343 G 343
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 10 QDVAIKQLD-------RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY 62
Q VAIK++ ++G+ NR L E+ +L L HPN++ L+ LV+++
Sbjct: 36 QIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
M +E + D S P M + +GLEYLH +++RDLK +N+LLD
Sbjct: 94 ME-TDLEVIIKDNSLVLTPSHIKAYMLMTL---QGLEYLHQHW---ILHRDLKPNNLLLD 146
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLL 181
KL+DFGLAK G + T Y APE ++ + D+++ G +L
Sbjct: 147 ENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA 204
Query: 182 EIL 184
E+L
Sbjct: 205 ELL 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEV-LMLSLLHHPNLVNLIGYCADGDQR-------LLVYE 61
++ A+K+L N + NR + EV M L HPN+V + G + L+
Sbjct: 54 REYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT 113
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
+ G + + L + + PL +T +KI R ++++H + KPP+I+RDLK N+LL
Sbjct: 114 ELCKGQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLL 171
Query: 122 DRGYHPKLSDFGLA 135
KL DFG A
Sbjct: 172 SNQGTIKLCDFGSA 185
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 9 LQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
L+ + K L ++ +QG E E+ L LL HP+++ L D+ ++V EY
Sbjct: 34 LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-----A 86
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ L D + + + +EY H + +++RDLK N+LLD + K
Sbjct: 87 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVK 143
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + DV+S GV+L +L
Sbjct: 144 IADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 187 RKAVD 191
R D
Sbjct: 200 RLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 9 LQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
L+ + K L ++ +QG E E+ L LL HP+++ L D+ ++V EY
Sbjct: 44 LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-----A 96
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ L D + + + +EY H + +++RDLK N+LLD + K
Sbjct: 97 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVK 153
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + DV+S GV+L +L
Sbjct: 154 IADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 187 RKAVD 191
R D
Sbjct: 210 RLPFD 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 13 AIKQLDRNGV---QGNREFLVEVLMLSLLHH---PNLVNLIGYCADGDQRLLVYEYMPLG 66
A+K LD+ + QG L E +MLSL+ P +V + D+ + + M G
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ HL + + M+ AA GLE++H++ V+YRDLK +NILLD
Sbjct: 278 DLHYHL-----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHG 329
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEIL 184
H ++SD GLA H S +GT+GY APE + G +D +S G +L ++L
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 185 SG 186
G
Sbjct: 386 RG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 13 AIKQLDRNGV---QGNREFLVEVLMLSLLHH---PNLVNLIGYCADGDQRLLVYEYMPLG 66
A+K LD+ + QG L E +MLSL+ P +V + D+ + + M G
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ HL + + M+ AA GLE++H++ V+YRDLK +NILLD
Sbjct: 278 DLHYHL-----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHG 329
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEIL 184
H ++SD GLA H S +GT+GY APE + G +D +S G +L ++L
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 185 SG 186
G
Sbjct: 386 RG 387
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 13 AIKQLDRNGV---QGNREFLVEVLMLSLLHH---PNLVNLIGYCADGDQRLLVYEYMPLG 66
A+K LD+ + QG L E +MLSL+ P +V + D+ + + M G
Sbjct: 217 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 276
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ HL + + M+ AA GLE++H++ V+YRDLK +NILLD
Sbjct: 277 DLHYHL-----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHG 328
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEIL 184
H ++SD GLA H S +GT+GY APE + G +D +S G +L ++L
Sbjct: 329 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
Query: 185 SG 186
G
Sbjct: 385 RG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 13 AIKQLDRNGV---QGNREFLVEVLMLSLLHH---PNLVNLIGYCADGDQRLLVYEYMPLG 66
A+K LD+ + QG L E +MLSL+ P +V + D+ + + M G
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ HL + + M+ AA GLE++H++ V+YRDLK +NILLD
Sbjct: 278 DLHYHL-----SQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHG 329
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEIL 184
H ++SD GLA H S +GT+GY APE + G +D +S G +L ++L
Sbjct: 330 HVRISDLGLA-CDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 185 SG 186
G
Sbjct: 386 RG 387
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 15 KQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSVED 70
K+LD + + ++ LV EV +L L HPN+V D L V EY G +
Sbjct: 37 KELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS 96
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK--PPVIYRDLKCSNILLDRGYHPK 128
+ + ++ LD +++ L+ H ++ V++RDLK +N+ LD + K
Sbjct: 97 VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
L DFGLA++ + + + +GT Y +PE KSD++S G +L E+
Sbjct: 157 LGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 9 LQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
L+ + K L ++ +QG E E+ L LL HP+++ L D+ ++V EY
Sbjct: 43 LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-----A 95
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ L D + + + +EY H + +++RDLK N+LLD + K
Sbjct: 96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVK 152
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + DV+S GV+L +L
Sbjct: 153 IADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 187 RKAVD 191
R D
Sbjct: 209 RLPFD 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 101
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 102 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 155
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 156 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 12 VAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HL + +P + R AA EYLH +IYRDLK N+L+D+ + +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 129 LSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
++DFG AK V R GT Y APE + D ++ GV++ E+ +
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 186 G 186
G
Sbjct: 234 G 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 9 LQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
L+ + K L ++ +QG E E+ L LL HP+++ L D+ ++V EY
Sbjct: 38 LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-----A 90
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ L D + + + +EY H + +++RDLK N+LLD + K
Sbjct: 91 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVK 147
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + DV+S GV+L +L
Sbjct: 148 IADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 187 RKAVD 191
R D
Sbjct: 204 RLPFD 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 12 VAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HL + +P + R AA EYLH +IYRDLK N+L+D+ + +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 129 LSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
++DFG AK V R GT Y APE + D ++ GV++ E+ +
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 186 G 186
G
Sbjct: 234 G 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 12 VAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 69 FAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM 128
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
HL + +P + R AA EYLH +IYRDLK N+L+D+ + +
Sbjct: 129 FSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQ 181
Query: 129 LSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
++DFG AK V R GT Y APE + D ++ GV++ E+ +
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 186 G 186
G
Sbjct: 234 G 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 123 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 176 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 104
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 105 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 158
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 159 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 34 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 93
+L + HP +V+LI G + L+ EY+ G + L + +T A
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAE 129
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 153
+ L +LH K +IYRDLK NI+L+ H KL+DFGL K + D T V+ GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHTFCGT 184
Query: 154 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
Y APE D +S G ++ ++L+G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 123 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 175
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 176 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 150
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 151 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 204 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+P G +
Sbjct: 56 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 115
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 116 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 168
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 169 TDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 102
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 103 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 156
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 157 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 34 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 93
+L + HP +V+LI G + L+ EY+ G + L + +T A
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAE 129
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 153
+ L +LH K +IYRDLK NI+L+ H KL+DFGL K + D T V+ GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHXFCGT 184
Query: 154 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
Y APE D +S G ++ ++L+G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 127
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 128 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 181
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 182 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 100 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 154 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 100 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 154 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 96
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 97 FLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 150
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 151 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 21 GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK 80
G QG +VE +L+ +H +V+L LV M G + H++++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 81 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 140
+ A GLE+LH + +IYRDLK N+LLD + ++SD GLA
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 141 GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
G + GT G+ APE + D ++ GV L E+++ R
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+L++ K+ DFGLA++ P D+T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 21 GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK 80
G QG +VE +L+ +H +V+L LV M G + H++++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 81 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 140
+ A GLE+LH + +IYRDLK N+LLD + ++SD GLA
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 141 GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
G + GT G+ APE + D ++ GV L E+++ R
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 21 GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK 80
G QG +VE +L+ +H +V+L LV M G + H++++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 81 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 140
+ A GLE+LH + +IYRDLK N+LLD + ++SD GLA
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 141 GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
G + GT G+ APE + D ++ GV L E+++ R
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 8/167 (4%)
Query: 21 GVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK 80
G QG +VE +L+ +H +V+L LV M G + H++++
Sbjct: 228 GYQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 81 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 140
+ A GLE+LH + +IYRDLK N+LLD + ++SD GLA
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 141 GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
G + GT G+ APE + D ++ GV L E+++ R
Sbjct: 342 GQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 115
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 116 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 162
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 163 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 186 G 186
G
Sbjct: 221 G 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 117
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 118 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 164
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 165 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 186 G 186
G
Sbjct: 223 G 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 10 QDVAIKQLDRNGVQGNREFLV---EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLG 66
Q VA+K + R ++ + + E+ L LL HP+++ L ++V EY G
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-G 93
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
+ D++ + KK + + + +EY H + +++RDLK N+LLD +
Sbjct: 94 ELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLN 146
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEIL 184
K++DFGL+ + G+ S G+ Y APE G+L + DV+S G+VL +L
Sbjct: 147 VKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVML 202
Query: 185 SGRKAVDTS---KAAAEQSLVAWARPLF-----QDRTRHSLIADP 221
GR D + + + P F Q R ++ADP
Sbjct: 203 VGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADP 247
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 160
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 161 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 207
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 208 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
Query: 186 G 186
G
Sbjct: 266 G 266
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +S+L HP LVNL D ++ +++YE+M G + + + D + + ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEY 154
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILL--DRGYHPKLSDFGL-AKLGPVGDNTHVS 147
+GL ++H+ ++ DLK NI+ R KL DFGL A L P + V+
Sbjct: 155 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVT 210
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
T GT + APE A+ + +D++S GV+ +LSG
Sbjct: 211 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 3 QVILC----LLQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQ 55
+VILC Q+ A+K + + V+ + L EV +L L HPN++ L + D
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 100
Query: 56 RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G + D + +K +I G+ Y+H K +++RDLK
Sbjct: 101 FYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLK 153
Query: 116 CSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAKTGQL 167
N+LL+ + + ++ DFGL+ TH +GT Y APE G
Sbjct: 154 PENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTY 204
Query: 168 TLKSDVYSFGVVLLEILSG 186
K DV+S GV+L +LSG
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 3 QVILC----LLQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQ 55
+VILC Q+ A+K + + V+ + L EV +L L HPN++ L + D
Sbjct: 64 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 123
Query: 56 RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G + D + +K +I G+ Y+H K +++RDLK
Sbjct: 124 FYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLK 176
Query: 116 CSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAKTGQL 167
N+LL+ + + ++ DFGL+ TH +GT Y APE G
Sbjct: 177 PENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTY 227
Query: 168 TLKSDVYSFGVVLLEILSG 186
K DV+S GV+L +LSG
Sbjct: 228 DEKCDVWSTGVILYILLSG 246
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +S+L HP LVNL D ++ +++YE+M G + + + D + + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEY 260
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILL--DRGYHPKLSDFGL-AKLGPVGDNTHVS 147
+GL ++H+ ++ DLK NI+ R KL DFGL A L P + V+
Sbjct: 261 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVT 316
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
T GT + APE A+ + +D++S GV+ +LSG
Sbjct: 317 T---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 3 QVILC----LLQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQ 55
+VILC Q+ A+K + + V+ + L EV +L L HPN++ L + D
Sbjct: 65 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 124
Query: 56 RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G + D + +K +I G+ Y+H K +++RDLK
Sbjct: 125 FYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLK 177
Query: 116 CSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAKTGQL 167
N+LL+ + + ++ DFGL+ TH +GT Y APE G
Sbjct: 178 PENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTY 228
Query: 168 TLKSDVYSFGVVLLEILSG 186
K DV+S GV+L +LSG
Sbjct: 229 DEKCDVWSTGVILYILLSG 247
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 97 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 156
LE+LH K +IYRD+K NILLD H L+DFGL+K V D T + GT Y
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIEY 226
Query: 157 CAPEYAKTGQLTLKS--DVYSFGVVLLEILSGRK--AVD---TSKAAAEQSLVAWARP-- 207
AP+ + G D +S GV++ E+L+G VD S+A + ++ P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286
Query: 208 -----LFQDRTRHSLIADPELQGQYPPRG--------FYQALAVAAMCVHEQPD-MRPVI 253
L +D + L+ DP+ + PR F+Q + + + P +PVI
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVI 346
Query: 254 AD 255
D
Sbjct: 347 RD 348
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VA+K++ + +G + E+ ++ L H N+V L ++ LV+E+M ++
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKK 91
Query: 71 HLHDLSPGKKP--LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
++ + G P L+ N +GL + H+ +++RDLK N+L+++ K
Sbjct: 92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLK 148
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
L DFGLA+ + NT S V T Y AP+ + S D++S G +L E+++G+
Sbjct: 149 LGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 480 FLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 533
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 534 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 106
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 107 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 153
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 154 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 186 G 186
G
Sbjct: 212 G 212
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K++D Q EV+++ H N+V + GD+ +V E++ G++ D
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD- 110
Query: 72 LHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+ +TRM +IAA + L LH + VI+RD+K +ILL
Sbjct: 111 ----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 157
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
KLSDFG V ++GT + APE + D++S G++++E++
Sbjct: 158 RVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 186 G 186
G
Sbjct: 216 G 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 11 DVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+VA+K ++ N+E F+ E +++ L HP++V LIG + + ++ E P G +
Sbjct: 38 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELG 96
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
H L K L T + + + + YL ++RD+ NIL+ KL
Sbjct: 97 ---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKL 150
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRK 188
DFGL++ D S + + +PE + T SDV+ F V + EILS K
Sbjct: 151 GDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 100 FLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLG 153
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 154 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 11 DVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+VA+K ++ N+E F+ E +++ L HP++V LIG + + ++ E P G +
Sbjct: 54 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELG 112
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
H L K L T + + + + YL ++RD+ NIL+ KL
Sbjct: 113 ---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKL 166
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRK 188
DFGL++ D S + + +PE + T SDV+ F V + EILS K
Sbjct: 167 GDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 33 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-A 91
++L + HP LV L D+ V +Y+ G + HL +P R + A
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----RARFYA 145
Query: 92 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 151
A A L YLH ++YRDLK NILLD H L+DFGL K + N+ ST
Sbjct: 146 AEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTST-FC 200
Query: 152 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT Y APE D + G VL E+L G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 99
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 100 FLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T +++ + APE + T SDV+ FGV + EIL
Sbjct: 154 DFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 11 DVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+VA+K ++ N+E F+ E +++ L HP++V LIG + + ++ E P G +
Sbjct: 42 NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELG 100
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
H L K L T + + + + YL ++RD+ NIL+ KL
Sbjct: 101 ---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKL 154
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRK 188
DFGL++ D S + + +PE + T SDV+ F V + EILS K
Sbjct: 155 GDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 3 QVILC----LLQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQ 55
+VILC Q+ A+K + + V+ + L EV +L L HPN++ L + D
Sbjct: 47 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY 106
Query: 56 RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G + D + +K +I G+ Y+H K +++RDLK
Sbjct: 107 FYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLK 159
Query: 116 CSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAKTGQL 167
N+LL+ + + ++ DFGL+ TH +GT Y APE G
Sbjct: 160 PENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTY 210
Query: 168 TLKSDVYSFGVVLLEILSG 186
K DV+S GV+L +LSG
Sbjct: 211 DEKCDVWSTGVILYILLSG 229
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY P G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
KI + L +L + K +I+RD+K SNILLDR + KL DFG++ G + D+ T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKT 183
Query: 149 RVMGTYGYCAPE----YAKTGQLTLKSDVYSFGVVLLEILSGR 187
R G Y APE A ++SDV+S G+ L E+ +GR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + E+ + S L HPN++ + Y D + L+ E+ P G + L
Sbjct: 52 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-- 107
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
G+ D A L Y H++ VI+RD+K N+L+ K++DFG +
Sbjct: 108 KHGR--FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 162
Query: 136 KLGPVGDNTHVSTRVM-GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDT 192
P + R M GT Y PE + K D++ GV+ E L G D+
Sbjct: 163 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 12 VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK RE FL E L + HP++V LIG + + ++ E LG +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 479
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
L K LD + + A + L YL K ++RD+ N+L+ KL
Sbjct: 480 FLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLG 533
Query: 131 DFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
DFGL++ + D+T+ +++ + APE + T SDV+ FGV + EIL
Sbjct: 534 DFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P L L D +V EY P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P L L D +V EY P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + E+ + S L HPN++ + Y D + L+ E+ P G + L
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-- 106
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
G+ D A L Y H++ VI+RD+K N+L+ K++DFG +
Sbjct: 107 KHGR--FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
Query: 136 KLGPVGDNTHVSTRVM-GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDT 192
P + R M GT Y PE + K D++ GV+ E L G D+
Sbjct: 162 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
QL++ GV+ + E+ + S L HPN++ + Y D + L+ E+ P G + L
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-- 106
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
G+ D A L Y H++ VI+RD+K N+L+ K++DFG +
Sbjct: 107 KHGR--FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
Query: 136 KLGPVGDNTHVSTRVM-GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDT 192
P + R M GT Y PE + K D++ GV+ E L G D+
Sbjct: 162 VHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH--LHDLSPGKKPLDWNT 86
L E+ ML L HPNLVNL+ + LV+EY DH LH+L ++ + +
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHL 103
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
I + + + H K I+RD+K NIL+ + KL DFG A+L G + +
Sbjct: 104 VKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYY 159
Query: 147 STRVMGTYGYCAPE-YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ------ 199
V T Y +PE Q DV++ G V E+LSG + K+ +Q
Sbjct: 160 DDEV-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRK 217
Query: 200 ---SLVAWARPLFQDRTRHSLIADPELQGQYP-----PRGFYQALAVAAMCVHEQPDMR 250
L+ + +F S + P+ + P P Y AL + C+H P R
Sbjct: 218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P L L D +V EY P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + K+
Sbjct: 131 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHH--PNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
+A+KQ+ R+G + + ++ L + L H P +V G + E M G+
Sbjct: 53 IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCA 110
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
+ L G P +M +A + L YL K K VI+RD+K SNILLD KL
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAI--VKALYYL--KEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT-----LKSDVYSFGVVLLEIL 184
DFG++ G + D+ R G Y APE T +++DV+S G+ L+E+
Sbjct: 167 CDFGIS--GRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 185 SGR 187
+G+
Sbjct: 224 TGQ 226
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E + ++ P LV L D +V EY P G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + K+
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 ADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 35/262 (13%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+V +K LD+ + F M+S L H +LV G C GD+ +LV E++ GS++
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT 101
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ L K ++ ++++A A + +L + +I+ ++ NILL R K
Sbjct: 102 Y---LKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 131 DFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVLLEILSG- 186
+ KL G + V + + + PE + L L +D +SFG L EI SG
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG 215
Query: 187 ---RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCV 243
A+D+ + ++DR Q P + + C+
Sbjct: 216 DKPLSALDSQRKLQ----------FYEDR------------HQLPAPKAAELANLINNCM 253
Query: 244 HEQPDMRPVIADVVTALAYLAS 265
+PD RP ++ L L +
Sbjct: 254 DYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 31 EVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
E+ +L L HPN+V L+ D D +V+E + G V + P KPL +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
+G+EYLH + +I+RD+K SN+L+ H K++DFG++ D +T
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 149 RVMGTYGYCAPEYAKTGQLTLKS---DVYSFGVVLLEILSGR 187
+GT + APE + DV++ GV L + G+
Sbjct: 198 --VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G L D K+ L
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGG----ELFDFLAQKESLSEEEATSF 120
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH K + + DLK NI LLD+ H KL DFGLA + D
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEF 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 KN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 35 LSLLHHPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L+ CA D+ + LV+E++ + +L P P + T
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 124
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ + T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTP 178
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
V+ T Y APE D++S G + E+ RK + + A+Q
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 227
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 35/262 (13%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+V +K LD+ + F M+S L H +LV G C GD+ +LV E++ GS++
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDT 101
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
+ L K ++ ++++A A + +L + +I+ ++ NILL R K
Sbjct: 102 Y---LKKNKNCINILWKLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTG 155
Query: 131 DFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVLLEILSG- 186
+ KL G + V + + + PE + L L +D +SFG L EI SG
Sbjct: 156 NPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG 215
Query: 187 ---RKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCV 243
A+D+ + ++DR Q P + + C+
Sbjct: 216 DKPLSALDSQRKLQ----------FYEDR------------HQLPAPKAAELANLINNCM 253
Query: 244 HEQPDMRPVIADVVTALAYLAS 265
+PD RP ++ L L +
Sbjct: 254 DYEPDHRPSFRAIIRDLNSLFT 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 31/199 (15%)
Query: 3 QVILC----LLQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQ 55
+VILC Q+ A+K + + V+ + L EV +L L HPN+ L + D
Sbjct: 41 EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGY 100
Query: 56 RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
LV E G + D + +K +I G+ Y H K +++RDLK
Sbjct: 101 FYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLK 153
Query: 116 CSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR-----VMGTYGYCAPEYAKTGQL 167
N+LL+ + + ++ DFGL+ TH +GT Y APE G
Sbjct: 154 PENLLLESKSKDANIRIIDFGLS--------THFEASKKXKDKIGTAYYIAPEVLH-GTY 204
Query: 168 TLKSDVYSFGVVLLEILSG 186
K DV+S GV+L +LSG
Sbjct: 205 DEKCDVWSTGVILYILLSG 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 16 QLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL 75
Q+++ GV+ + E+ + + LHHPN++ L Y D + L+ EY P G + L
Sbjct: 60 QIEKEGVE--HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS 117
Query: 76 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 135
D I A L Y H K VI+RD+K N+LL K++DFG +
Sbjct: 118 C----TFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWS 170
Query: 136 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
P + + GT Y PE + K D++ GV+ E+L G +++
Sbjct: 171 VHAP----SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T + T
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTY 154
RGL+Y+H V++RDLK SN+LL+ K+ DFGLA++ P D+T + T
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 155 GYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSGR 187
Y APE + KS D++S G +L E+LS R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 131 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 183
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 184 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ + L +P++V G+ D D +V E S L +L +K +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARY 146
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVST 148
+G++YLH+ VI+RDLK N+ L+ K+ DFGLA K+ G+
Sbjct: 147 FMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-- 201
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQS 200
+ GT Y APE + + D++S G +L +L G+ +TS E S
Sbjct: 202 -LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 201 LVAWARPLFQDRTRHSLIADPELQ 224
+ P+ R L ADP L+
Sbjct: 261 VPRHINPVASALIRRMLHADPTLR 284
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R + GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 125 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 177
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 178 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA----DGDQRLLVYEYMP 64
++VA+K R+ RE E+ +L H N++ I Q L+ Y
Sbjct: 32 ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNI 119
+GS+ D+L + LD + ++I A GL +LH + KP + +RDLK NI
Sbjct: 90 MGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 120 LLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTYGYCAPEYA-KTGQLTL-- 169
L+ + ++D GLA + VG+N V GT Y APE +T Q+
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVLDETIQVDCFD 199
Query: 170 ---KSDVYSFGVVLLEI 183
+ D+++FG+VL E+
Sbjct: 200 SYKRVDIWAFGLVLWEV 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA----DGDQRLLVYEYMP 64
++VA+K R+ RE E+ +L H N++ I Q L+ Y
Sbjct: 32 ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNI 119
+GS+ D+L + LD + ++I A GL +LH + KP + +RDLK NI
Sbjct: 90 MGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 120 LLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTYGYCAPEYA-KTGQLTL-- 169
L+ + ++D GLA + VG+N V GT Y APE +T Q+
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVLDETIQVDCFD 199
Query: 170 ---KSDVYSFGVVLLEI 183
+ D+++FG+VL E+
Sbjct: 200 SYKRVDIWAFGLVLWEV 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 151 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK T + GT Y APE + D ++ GV++ E+ +G
Sbjct: 204 TDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 35/197 (17%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA----DGDQRLLVYEYMP 64
++VA+K R+ RE E+ +L H N++ I Q L+ Y
Sbjct: 61 ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNI 119
+GS+ D+L LD + ++I A GL +LH + KP + +RDLK NI
Sbjct: 119 MGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 173
Query: 120 LLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTYGYCAPEYA-KTGQLTL-- 169
L+ + ++D GLA + VG+N V GT Y APE +T Q+
Sbjct: 174 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVLDETIQVDCFD 228
Query: 170 ---KSDVYSFGVVLLEI 183
+ D+++FG+VL E+
Sbjct: 229 SYKRVDIWAFGLVLWEV 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ + L +P++V G+ D D +V E S L +L +K +
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARY 130
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+G++YLH+ VI+RDLK N+ L+ K+ DFGLA + +
Sbjct: 131 FMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKD 185
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSL 201
+ GT Y APE + + D++S G +L +L G+ +TS E S+
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 202 VAWARPLFQDRTRHSLIADPELQ 224
P+ R L ADP L+
Sbjct: 246 PRHINPVASALIRRMLHADPTLR 268
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 28 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSVEDHLHDLSPGKKPLDWN 85
F E +++ + P +V L +CA D + L V EYMP G D ++ +S P W
Sbjct: 122 FWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGG---DLVNLMSNYDVPEKWA 176
Query: 86 TRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNT 144
A L+ +H +I+RD+K N+LLD+ H KL+DFG K+ G
Sbjct: 177 KFY--TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MV 230
Query: 145 HVSTRVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 186
H T V GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 231 HCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ + L +P++V G+ D D +V E S L +L +K +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARY 146
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+G++YLH+ VI+RDLK N+ L+ K+ DFGLA + +
Sbjct: 147 FMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKX 201
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSL 201
+ GT Y APE + + D++S G +L +L G+ +TS E S+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 202 VAWARPLFQDRTRHSLIADPELQ 224
P+ R L ADP L+
Sbjct: 262 PRHINPVASALIRRMLHADPTLR 284
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFAEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 99
HP+++ LI LV++ M G + D+L + K L I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVS 214
Query: 100 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 159
+LH +++RDLK NILLD +LSDFG + G+ + GT GY AP
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAP 268
Query: 160 EYAKTGQLTL------KSDVYSFGVVLLEILSG 186
E K + D+++ GV+L +L+G
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ + L +P++V G+ D D +V E S L +L +K +
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARY 146
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+G++YLH+ VI+RDLK N+ L+ K+ DFGLA + +
Sbjct: 147 FMRQTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKD 201
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSL 201
+ GT Y APE + + D++S G +L +L G+ +TS E S+
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 202 VAWARPLFQDRTRHSLIADPELQ 224
P+ R L ADP L+
Sbjct: 262 PRHINPVASALIRRMLHADPTLR 284
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + HPN++ L + +L+ E + G + D L +
Sbjct: 47 RRGV-SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---- 101
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGL 134
K+ L + + G+ YLH K + + DLK NI LLD+ +P KL DFG+
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A G+ + GT + APE L L++D++S GV+ +LSG
Sbjct: 159 AHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 151 SHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 203
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 204 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAA-------- 196
+ GT + APE L L++D++S GV+ +LSG DT +
Sbjct: 176 --NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 197 --AEQSLVAWARPLFQDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 244
E + L +D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + HPN++ L + +L+ E + G + D L +
Sbjct: 54 RRGV-SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---- 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGL 134
K+ L + + G+ YLH K + + DLK NI LLD+ +P KL DFG+
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A G+ + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L LHHPN+V+LI LV+E+M E L + K ++++KI
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKI 123
Query: 91 AA-GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVS 147
RG+ + H +++RDLK N+L++ KL+DFGLA+ G PV TH
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 148 TRVMGTYGYCAPEY-AKTGQLTLKSDVYSFGVVLLEILSGR 187
T Y AP+ + + + D++S G + E+++G+
Sbjct: 181 V----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D + ++
Sbjct: 117 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQV 169
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 170 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+++D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L LHHPN+V+LI LV+E+M E L + K ++++KI
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKI 123
Query: 91 AA-GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVS 147
RG+ + H +++RDLK N+L++ KL+DFGLA+ G PV TH
Sbjct: 124 YLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 148 TRVMGTYGYCAPE-YAKTGQLTLKSDVYSFGVVLLEILSGR 187
T Y AP+ + + + D++S G + E+++G+
Sbjct: 181 V----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + HPN++ L + +L+ E + G + D L +
Sbjct: 68 RRGV-SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---- 122
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGL 134
K+ L + + G+ YLH K + + DLK NI LLD+ +P KL DFG+
Sbjct: 123 KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A G+ + GT + APE L L++D++S GV+ +LSG
Sbjct: 180 AHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 20/189 (10%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLS-LLHHPNLVNLIGYCAD------GDQRLLVYEY 62
Q AIK +D G + E E+ ML HH N+ G DQ LV E+
Sbjct: 50 QLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
GSV D + + +W I RGL +LH VI+RD+K N+LL
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQHK---VIHRDIKGQNVLLT 163
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ-----LTLKSDVYSFG 177
KL DFG++ + +GT + APE + KSD++S G
Sbjct: 164 ENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 221
Query: 178 VVLLEILSG 186
+ +E+ G
Sbjct: 222 ITAIEMAEG 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAA-------- 196
+ GT + APE L L++D++S GV+ +LSG DT +
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 197 --AEQSLVAWARPLFQDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 244
E + L +D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 12 VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK +D+N + + E+ L L H ++ L ++ +V EY P G + D
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 130
++ +S + + TR+ + + Y+H + +RDLK N+L D + KL
Sbjct: 98 YI--ISQDRLSEE-ETRV-VFRQIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLI 150
Query: 131 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEILSGRKA 189
DFGL P G+ + G+ Y APE + L ++DV+S G++L ++ G
Sbjct: 151 DFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
Query: 190 VDTSKAAA 197
D A
Sbjct: 210 FDDDNVMA 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y APE + D ++ GV++ ++ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 35 LSLLHHPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L+ CA D+ + LV+E++ + +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAP 170
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
V+ T Y APE D++S G + E+ RK + + A+Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 10 QDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVN----LIGYCADGDQRLLVYEYM 63
Q VAIK++ + V + L E+ +L H N++ L G+ + + Y+
Sbjct: 81 QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV---YV 137
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
L +E LH + +PL RGL+Y+H VI+RDLK SN+L++
Sbjct: 138 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNE 194
Query: 124 GYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVL 180
K+ DFG+A+ ++ + T + T Y APE + + T D++S G +
Sbjct: 195 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 254
Query: 181 LEILSGRK 188
E+L+ R+
Sbjct: 255 GEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 10 QDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVN----LIGYCADGDQRLLVYEYM 63
Q VAIK++ + V + L E+ +L H N++ L G+ + + Y+
Sbjct: 80 QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV---YV 136
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
L +E LH + +PL RGL+Y+H VI+RDLK SN+L++
Sbjct: 137 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNE 193
Query: 124 GYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVL 180
K+ DFG+A+ ++ + T + T Y APE + + T D++S G +
Sbjct: 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 253
Query: 181 LEILSGRK 188
E+L+ R+
Sbjct: 254 GEMLARRQ 261
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPLGSVEDH 71
A K ++ + +++VE+ +L+ HP +V L+G Y DG +++ E+ P G+V+
Sbjct: 48 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI-EFCPGGAVDAI 106
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
+ +L G L + L +LH K +I+RDLK N+L+ +L+D
Sbjct: 107 MLELDRG---LTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLAD 160
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-----KTGQLTLKSDVYSFGVVLLEI 183
FG++ +GT + APE K K+D++S G+ L+E+
Sbjct: 161 FGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAA-------- 196
+ GT + APE L L++D++S GV+ +LSG DT +
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 197 --AEQSLVAWARPLFQDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 244
E + L +D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAA-------- 196
+ GT + APE L L++D++S GV+ +LSG DT +
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 197 --AEQSLVAWARPLFQDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 244
E + L +D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPLGSVEDH 71
A K ++ + +++VE+ +L+ HP +V L+G Y DG +++ E+ P G+V+
Sbjct: 40 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI-EFCPGGAVDAI 98
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSD 131
+ +L G L + L +LH K +I+RDLK N+L+ +L+D
Sbjct: 99 MLELDRG---LTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLAD 152
Query: 132 FGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-----KTGQLTLKSDVYSFGVVLLEI 183
FG++ +GT + APE K K+D++S G+ L+E+
Sbjct: 153 FGVSAKN--LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAA-------- 196
+ GT + APE L L++D++S GV+ +LSG DT +
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 197 --AEQSLVAWARPLFQDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 244
E + L +D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 18 DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP 77
++N + + E E+ +L L HPN++ L D LV E+ G + + +
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI----I 138
Query: 78 GKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRG---YHPKLSDFGL 134
+ D I G+ YLH K +++RD+K NILL+ + K+ DFGL
Sbjct: 139 NRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ + + R +GT Y APE K + K DV+S GV++ +L G
Sbjct: 196 SSF--FSKDYKLRDR-LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
+A K + G++ E E+ +++ L H NL+ L + +LV EY+ G + D
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDR-GYHPKL 129
+ D S LD MK G+ ++H + +++ DLK NIL ++R K+
Sbjct: 177 IIDESYNLTELDTILFMK---QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKI 230
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
DFGLA+ + V+ GT + APE ++ +D++S GV+ +LSG
Sbjct: 231 IDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 64 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 119
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVST 148
G +YLH VI+RDLK N+ L+ K+ DFGLA K+ G+ V
Sbjct: 120 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-- 174
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 175 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 88 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 143
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVST 148
G +YLH VI+RDLK N+ L+ K+ DFGLA K+ G+ V
Sbjct: 144 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-- 198
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 199 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 35 LSLLHHPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L+ CA D+ + LV+E++ + +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFP 170
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
V+ T Y APE D++S G + E+ RK + + A+Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 90 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 145
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVST 148
G +YLH VI+RDLK N+ L+ K+ DFGLA K+ G+ V
Sbjct: 146 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-- 200
Query: 149 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 201 -LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 35 LSLLHHPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L+ CA D+ + LV+E++ + +L P P + T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKD 116
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDP 170
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
V+ T Y APE D++S G + E+ RK + + A+Q
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 48 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 103
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 104 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 53 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 108
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 109 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 47 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 102
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 103 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 34/201 (16%)
Query: 12 VAIKQLD---RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC-ADGDQRL-LVYEYMPLG 66
VA+K++ +N R F +++ L H N+VNL+ AD D+ + LV++YM
Sbjct: 37 VAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM--- 93
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
E LH + L+ + + + ++YLH +++RD+K SNILL+ H
Sbjct: 94 --ETDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECH 147
Query: 127 PKLSDFGLAKLG------------PVGDNTH-------VSTRVMGTYGYCAPEY-AKTGQ 166
K++DFGL++ + +NT + T + T Y APE + +
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 167 LTLKSDVYSFGVVLLEILSGR 187
T D++S G +L EIL G+
Sbjct: 208 YTKGIDMWSLGCILGEILCGK 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 13 AIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
AIK + ++ V L EV +L L HPN++ L + D LV E G +
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYH 126
D + L +D MK G YLH K +++RDLK N+LL+ R
Sbjct: 93 DEII-LRQKFSEVDAAVIMK---QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDAL 145
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
K+ DFGL+ VG +GT Y APE + + K DV+S GV+L +L G
Sbjct: 146 IKIVDFGLSAHFEVGGKM---KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 50 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 105
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 106 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 119 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 173
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 174 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+DFG AK V R GT Y AP + D ++ GV++ E+ +G
Sbjct: 183 TDFGFAK--------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 73 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 128
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 129 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 119 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 175 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 10 QDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA----DGDQRLLVYEYMP 64
+ VA+K R+ RE E+ LL H N++ I Q L+ Y
Sbjct: 32 ESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHE 89
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNI 119
GS+ D L ++ L+ + +++A AA GL +LH + KP + +RD K N+
Sbjct: 90 HGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNV 144
Query: 120 LLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTYGYCAPEYAKTGQLT---- 168
L+ ++D GLA + +G+N V GT Y APE T
Sbjct: 145 LVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-----GTKRYMAPEVLDEQIRTDCFE 199
Query: 169 --LKSDVYSFGVVLLEI 183
+D+++FG+VL EI
Sbjct: 200 SYKWTDIWAFGLVLWEI 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 13 AIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
AIK + ++ V L EV +L L HPN++ L + D LV E G +
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYH 126
D + L +D MK G YLH K +++RDLK N+LL+ R
Sbjct: 110 DEII-LRQKFSEVDAAVIMK---QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDAL 162
Query: 127 PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
K+ DFGL+ VG +GT Y APE + + K DV+S GV+L +L G
Sbjct: 163 IKIVDFGLSAHFEVGGKM---KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 26/172 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDW 84
E+ +L H N++ I AD Q LV +Y GS+ D+L+ + + +
Sbjct: 86 EIYQTVMLRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 141
Query: 85 NTRMKIAAGAARGLEYLH-----DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLG 138
+K+A A GL +LH + KP + +RDLK NIL+ + ++D GLA +
Sbjct: 142 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 139 PVGDNTHVS-TRVMGTYGYCAPEY------AKTGQLTLKSDVYSFGVVLLEI 183
D ++ +GT Y APE K + ++D+Y+ G+V EI
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 12 VAIKQLDRNGVQG---NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
VA+K L+R ++ + E+ L L HP+++ L + +V EY+ G +
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D++ G+ ++ ++ ++Y H + V++RDLK N+LLD + K
Sbjct: 99 FDYI--CKHGR--VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAK 151
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + D++S GV+L +L G
Sbjct: 152 IADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 187 RKAVD 191
D
Sbjct: 208 TLPFD 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK + + ++G + E+ +L + HPN+V L G L+ + + G + D
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL---LDRGYHP 127
+ + K ++ ++YLHD +++RDLK N+L LD
Sbjct: 106 RIVE----KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKI 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+SDFGL+K+ G V + GT GY APE + D +S GV+ +L G
Sbjct: 159 MISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 70 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 125
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
G +YLH VI+RDLK N+ L+ K+ DFGLA V +
Sbjct: 126 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKT 180
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 13 AIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVE 69
A+K LD+ V ++ L E +L ++ P LV L D +V EY+ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 70 DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKL 129
HL + +P + R AA EYLH +IYRDLK N+L+D+ + ++
Sbjct: 130 SHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182
Query: 130 SDFGLAKLGPVGDNTHVSTRVMG-TYGYC------APEYAKTGQLTLKSDVYSFGVVLLE 182
+DFG AK RV G T+ C APE + D ++ GV++ E
Sbjct: 183 TDFGFAK------------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 183 ILSG 186
+ +G
Sbjct: 231 MAAG 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 66 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 121
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
G +YLH VI+RDLK N+ L+ K+ DFGLA V +
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKT 176
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK + + ++G + E+ +L + HPN+V L G L+ + + G + D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL---LDRGYHP 127
+ + K ++ ++YLHD +++RDLK N+L LD
Sbjct: 106 RIVE----KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKI 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+SDFGL+K+ G V + GT GY APE + D +S GV+ +L G
Sbjct: 159 MISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
+E+ + L H ++V G+ D D +V E S L +L +K L
Sbjct: 66 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARY 121
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
G +YLH VI+RDLK N+ L+ K+ DFGLA V +
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKT 176
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 193
+ GT Y APE + + DV+S G ++ +L G+ +TS
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK + + ++G + E+ +L + HPN+V L G L+ + + G + D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL---LDRGYHP 127
+ + K ++ ++YLHD +++RDLK N+L LD
Sbjct: 106 RIVE----KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKI 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+SDFGL+K+ G V + GT GY APE + D +S GV+ +L G
Sbjct: 159 MISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + H N++ L + +L+ E + G L D
Sbjct: 54 RRGV-SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQ 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGL 134
K+ L G+ YLH K + + DLK NI LLD+ H KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A + D + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 12 VAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
VAIK + + ++G + E+ +L + HPN+V L G L+ + + G + D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL---LDRGYHP 127
+ + K ++ ++YLHD +++RDLK N+L LD
Sbjct: 106 RIVE----KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKI 158
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+SDFGL+K+ G V + GT GY APE + D +S GV+ +L G
Sbjct: 159 MISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + H N++ L + +L+ E + G L D
Sbjct: 54 RRGV-SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQ 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGL 134
K+ L G+ YLH K + + DLK NI LLD+ H KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A + D + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + H N++ L + +L+ E + G L D
Sbjct: 54 RRGV-SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQ 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGL 134
K+ L G+ YLH K + + DLK NI LLD+ H KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A + D + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 28 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNT 86
F E +++ + P +V L D +V EYMP G + + + + P K +
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 175
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGD 142
+ +A A + ++H RD+K N+LLD+ H KL+DFG + K G V
Sbjct: 176 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 143 NTHVSTRVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 186
+T V GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 227 DTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 28 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNT 86
F E +++ + P +V L D +V EYMP G + + + + P K +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGD 142
+ +A A + ++H RD+K N+LLD+ H KL+DFG + K G V
Sbjct: 181 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 143 NTHVSTRVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 186
+T V GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 232 DTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L + HPN++ L + +L+ E + G + D L + K+ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHV 146
G+ YLH + + DLK NI LLDR K+ DFGLA G+
Sbjct: 120 LKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE L L++D++S GV+ +LSG
Sbjct: 176 --NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + H N++ L + +L+ E + G L D
Sbjct: 54 RRGV-SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQ 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGL 134
K+ L G+ YLH K + + DLK NI LLD+ H KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A + D + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 19 RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 78
R GV E EV +L + H N++ L + +L+ E + G L D
Sbjct: 54 RRGV-SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQ 108
Query: 79 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI-LLDRGY---HPKLSDFGL 134
K+ L G+ YLH K + + DLK NI LLD+ H KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 135 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
A + D + GT + APE L L++D++S GV+ +LSG
Sbjct: 166 AH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 28 FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNT 86
F E +++ + P +V L D +V EYMP G + + + + P K +
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA 180
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGD 142
+ +A A + ++H RD+K N+LLD+ H KL+DFG + K G V
Sbjct: 181 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 143 NTHVSTRVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 186
+T V GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 232 DTAV-----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
+AIK++ + ++ E+ + L H N+V +G ++ + E +P GS+
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 72 LHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
L L ++ + + T+ + GL+YLHD +++RD+K N+L++ Y
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ---IVHRDIKGDNVLINT-YSG 160
Query: 128 --KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLE 182
K+SDFG +K L + T T GT Y APE G +D++S G ++E
Sbjct: 161 VLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 183 ILSGR 187
+ +G+
Sbjct: 218 MATGK 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 12 VAIKQLDRNGVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQR------LLVYEYM 63
VA+K L + + + EFL E + HP++ L+G + +++ +M
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 64 PLGSVEDHLHDLSPGKKPLDW--NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
G + L G+ P + T ++ A G+EYL + I+RDL N +L
Sbjct: 114 KHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCML 170
Query: 122 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 181
++DFGL++ GD + A E T+ SDV++FGV +
Sbjct: 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMW 230
Query: 182 EILS 185
EI++
Sbjct: 231 EIMT 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 12 VAIKQLDRNGVQG---NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
VA+K L+R ++ + E+ L L HP+++ L + +V EY+ G +
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
D++ G+ ++ ++ ++Y H + V++RDLK N+LLD + K
Sbjct: 99 FDYI--CKHGR--VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAK 151
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
++DFGL+ + G+ S G+ Y APE +G+L + D++S GV+L +L G
Sbjct: 152 IADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 187 RKAVD 191
D
Sbjct: 208 TLPFD 212
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 27/194 (13%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+ A+K +++ EV ML H N++ LI + + D+ LV+E M GS+
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP- 127
H+H ++ + + A L++LH+K + +RDLK NIL + HP
Sbjct: 99 LSHIHK----RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCE---HPN 148
Query: 128 -----KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCAPE----YAKTGQLTLK-SD 172
K+ DFGL + GD + +ST + G+ Y APE +++ + K D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 173 VYSFGVVLLEILSG 186
++S GV+L +LSG
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
+AIK++ + ++ E+ + L H N+V +G ++ + E +P GS+
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 72 LHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
L L ++ + + T+ + GL+YLHD +++RD+K N+L++ Y
Sbjct: 96 LRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ---IVHRDIKGDNVLINT-YSG 146
Query: 128 --KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLE 182
K+SDFG +K L + T T GT Y APE G +D++S G ++E
Sbjct: 147 VLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 183 ILSGR 187
+ +G+
Sbjct: 204 MATGK 208
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +++ LHHP L+NL D + +L+ E++ G + D ++ + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR---IAAEDYKMSEAEVINY 154
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLA-KLGPVGDNTHVS 147
A GL+++H+ + +++ D+K NI+ + + K+ DFGLA KL P +
Sbjct: 155 MRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIV 207
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
T + APE + +D+++ GV+ +LSG
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 35 LSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--TIKD 124
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH V++RDLK NIL+ KL+DFGLA++ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTS 178
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
V+ T Y APE D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 35 LSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--TIKD 124
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH V++RDLK NIL+ KL+DFGLA+ + T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTS 178
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
V+ T Y APE D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 35 LSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--TIKD 124
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 149
+ RGL++LH V++RDLK NIL+ KL+DFGLA++ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTS 178
Query: 150 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
V+ T Y APE D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 49/206 (23%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLV------------- 59
AIK++ R+ + L EV++L+ L+H +V Y A ++R V
Sbjct: 35 AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLF 91
Query: 60 --YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
EY G++ D +H + ++ ++ ++ L Y+H + +I+RDLK
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEY---WRLFRQILEALSYIHSQG---IIHRDLKPM 145
Query: 118 NILLDRGYHPKLSDFGLAKLGPVGDNTHVS------------------TRVMGTYGYCAP 159
NI +D + K+ DFGLAK N H S T +GT Y A
Sbjct: 146 NIFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199
Query: 160 EYAK-TGQLTLKSDVYSFGVVLLEIL 184
E TG K D+YS G++ E++
Sbjct: 200 EVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+ A+K +D++ + E +E+L L HPN++ L DG LV E M G + D
Sbjct: 54 EYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDRGYHP-- 127
+ +K + + +EYLH + V++RDLK SNIL +D +P
Sbjct: 111 KILR----QKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPEC 163
Query: 128 -KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++ DFG AK +N + T T + APE K D++S G++L +L+G
Sbjct: 164 LRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 115/319 (36%), Gaps = 86/319 (26%)
Query: 12 VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLVNLIGYCA-DGDQRLLVYEYMPLGSV 68
VA+K L + + E+ +L+ + HH N+VNL+G C G +++ EY G++
Sbjct: 60 VAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
Query: 69 EDHLHD-------------------------LSPGKKP-LDWNTRMKIAAGA-------- 94
++L L GKKP LD T + A +
Sbjct: 120 SNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSL 179
Query: 95 -----------------------------ARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
ARG+E+L + I+RDL NILL
Sbjct: 180 SDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENN 236
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 185
K+ DFGLA+ + + APE + KSDV+S+GV+L EI S
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 186 GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSL-IADPELQGQYPPRGFYQALAVAAMCVH 244
+ E F R R + + PE Y YQ + C H
Sbjct: 297 LGGSPYPGVQMDED---------FCSRLREGMRMRAPE----YSTPEIYQ---IMLDCWH 340
Query: 245 EQPDMRPVIADVVTALAYL 263
P RP A++V L L
Sbjct: 341 RDPKERPRFAELVEKLGDL 359
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+ A+K +D++ + E +E+L L HPN++ L DG LV E M G + D
Sbjct: 54 EYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDRGYHP-- 127
+ +K + + +EYLH + V++RDLK SNIL +D +P
Sbjct: 111 KILR----QKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPEC 163
Query: 128 -KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++ DFG AK +N + T T + APE K D++S G++L +L+G
Sbjct: 164 LRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 99
HPN+V L D LV E + G + + + KK I +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVS 120
Query: 100 YLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 156
++HD V++RDLK N+L + K+ DFG A+L P DN + T T Y
Sbjct: 121 HMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF-TLHY 175
Query: 157 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 187
APE D++S GV+L +LSG+
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 118
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 173
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 118
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 173
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 117
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 118 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 172
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 173 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 118
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 173
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 124
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 125 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 179
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 180 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMG 152
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 153 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 210
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 317
Query: 211 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYES 270
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 318 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
Query: 271 D 271
D
Sbjct: 366 D 366
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR---------------- 56
IK++ N + RE V L+ L H N+V+ G C DG
Sbjct: 40 VIKRVKYNNEKAERE----VKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKC 94
Query: 57 -LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 115
+ E+ G++E + K LD +++ +G++Y+H K +I RDLK
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEK--LDKVLALELFEQITKGVDYIHSK---KLINRDLK 149
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
SNI L K+ DFGL N R GT Y +PE + + D+Y+
Sbjct: 150 PSNIFLVDTKQVKIGDFGLV---TSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYA 206
Query: 176 FGVVLLEIL 184
G++L E+L
Sbjct: 207 LGLILAELL 215
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMG 152
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 153 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 210
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 319
Query: 211 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYES 270
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 320 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
Query: 271 D 271
D
Sbjct: 368 D 368
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 243
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 244 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 298
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 299 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 10 QDVAIKQLDRNG--------VQGNRE-FLVEVLMLSLLH-HPNLVNLIGYCADGDQRLLV 59
++ A+K +D G VQ RE L EV +L + HPN++ L LV
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 60 YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI 119
++ M G + D+L + K L KI + LH K +++RDLK NI
Sbjct: 103 FDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI 155
Query: 120 LLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ------LTLKSD 172
LLD + KL+DFG + +L P G+ V GT Y APE + + D
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 173 VYSFGVVLLEILSG 186
++S GV++ +L+G
Sbjct: 212 MWSTGVIMYTLLAG 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSV 68
A+K++ + Q E E M L +HPN++ L+ YC + L+ + G++
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ + L L + + + G RGLE +H K +RDLK +NILL P
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPV 174
Query: 129 LSDFGLAKLGPV---GDNTHVSTRVMG----TYGYCAPEYAKTGQLTL---KSDVYSFGV 178
L D G + G ++ + T Y APE + ++DV+S G
Sbjct: 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGC 234
Query: 179 VLLEILSGRKAVD 191
VL ++ G D
Sbjct: 235 VLYAMMFGEGPYD 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+ A+K +D++ E +E+L L HPN++ L DG +V E M G + D
Sbjct: 49 EFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDRGYHP-- 127
+ +K + + +EYLH + V++RDLK SNIL +D +P
Sbjct: 106 KILR----QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPES 158
Query: 128 -KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++ DFG AK +N + T T + APE + D++S GV+L +L+G
Sbjct: 159 IRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 99
HPN++ L LV++ M G + D+L + K L KI +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVIC 125
Query: 100 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCA 158
LH K +++RDLK NILLD + KL+DFG + +L P G+ V GT Y A
Sbjct: 126 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLA 178
Query: 159 PEYAKTGQ------LTLKSDVYSFGVVLLEILSG 186
PE + + D++S GV++ +L+G
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 10 QDVAIKQLDRNG--------VQGNRE-FLVEVLMLSLLH-HPNLVNLIGYCADGDQRLLV 59
++ A+K +D G VQ RE L EV +L + HPN++ L LV
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 60 YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNI 119
++ M G + D+L + K L KI + LH K +++RDLK NI
Sbjct: 103 FDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI 155
Query: 120 LLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ------LTLKSD 172
LLD + KL+DFG + +L P G+ V GT Y APE + + D
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 173 VYSFGVVLLEILSG 186
++S GV++ +L+G
Sbjct: 212 MWSTGVIMYTLLAG 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 30 VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E+ +L L+HP ++ + + D + +V E M G L D G K L T
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKL 257
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHV 146
++YLH+ +I+RDLK N+LL K++DFG +K+ +G+ + +
Sbjct: 258 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM 312
Query: 147 STRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 186
T + GT Y APE T D +S GV+L LSG
Sbjct: 313 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
Q+ A+K +++ EV ML H N++ LI + + D+ LV+E M GS+
Sbjct: 39 QEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP- 127
H+H ++ + + A L++LH+K + +RDLK NIL + HP
Sbjct: 99 LSHIHK----RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCE---HPN 148
Query: 128 -----KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGYCAPE----YAKTGQLTLK-SD 172
K+ DF L + GD + +ST + G+ Y APE +++ + K D
Sbjct: 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 173 VYSFGVVLLEILSG 186
++S GV+L +LSG
Sbjct: 209 LWSLGVILYILLSG 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 147
+++ +G++Y+H K +I+RDLK SNI L K+ DFGL N
Sbjct: 139 LELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKR 192
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
TR GT Y +PE + + D+Y+ G++L E+L
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
KIA + LE+LH K VI+RD+K SN+L++ K+ DFG++ G + D+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKT 211
Query: 149 RVMGTYGYCAPEYA----KTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
G Y APE ++KSD++S G+ ++E+ R D+ +Q
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 266
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L H N+V L + +LV+E+ L L D+ G L+ T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSF 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVST 148
G+ Y HD+ V++RDLK N+L++R K++DFGLA+ G PV TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 149 RVMGTYGYCAPEY-AKTGQLTLKSDVYSFGVVLLEILSG 186
T Y AP+ + + + D++S G + E+++G
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMG 152
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 153 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 210
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 310
Query: 211 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 263
R R PE+ YQ + C H +P RP +++V L L
Sbjct: 311 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 94 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMG 152
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 153 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 210
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 312
Query: 211 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 263
R R PE+ YQ + C H +P RP +++V L L
Sbjct: 313 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 353
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L H N+V L + +LV+E+ L L D+ G L+ T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSF 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVST 148
G+ Y HD+ V++RDLK N+L++R K++DFGLA+ G PV TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 149 RVMGTYGYCAPE-YAKTGQLTLKSDVYSFGVVLLEILSG 186
T Y AP+ + + + D++S G + E+++G
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L H N+V L + +LV+E+ L L D+ G L+ T
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSF 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVST 148
G+ Y HD+ V++RDLK N+L++R K++DFGLA+ G PV TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH--- 159
Query: 149 RVMGTYGYCAPE-YAKTGQLTLKSDVYSFGVVLLEILSG 186
+ T Y AP+ + + + D++S G + E+++G
Sbjct: 160 -EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 8 LLQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPL 65
L Q VA+K+L R + R E+ +L L H N++ L+ + P
Sbjct: 52 LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV------------FTPA 99
Query: 66 GSVEDH-------------LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYR 112
S+ED L+++ + D + + + RGL+Y+H +I+R
Sbjct: 100 TSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIHSAG---IIHR 155
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKS 171
DLK SN+ ++ ++ DFGLA+ +V+TR Y APE
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTV 210
Query: 172 DVYSFGVVLLEILSGR 187
D++S G ++ E+L G+
Sbjct: 211 DIWSVGCIMAELLQGK 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 28/107 (26%)
Query: 97 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS--------- 147
L Y+H + +I+RDLK NI +D + K+ DFGLAK N H S
Sbjct: 128 ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQ 178
Query: 148 ---------TRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEIL 184
T +GT Y A E TG K D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 10 QDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
++ A+K +++ EV L + N++ LI + D + LV+E + GS+
Sbjct: 39 KEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI 98
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD--RGYH 126
H+ +K + ++ A L++LH K + +RDLK NIL +
Sbjct: 99 LAHIQK----QKHFNEREASRVVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVS 151
Query: 127 P-KLSDFGLAKLGPVGDN-THVSTRVM----GTYGYCAPEYAK--TGQLTL---KSDVYS 175
P K+ DF L + ++ T ++T + G+ Y APE + T Q T + D++S
Sbjct: 152 PVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWS 211
Query: 176 FGVVLLEILSG 186
GVVL +LSG
Sbjct: 212 LGVVLYIMLSG 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 35/195 (17%)
Query: 8 LLQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPL 65
L Q VA+K+L R + R E+ +L L H N++ L+ + P
Sbjct: 44 LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV------------FTPA 91
Query: 66 GSVEDHLHD-LSPGKKPLDWNTRMKIAAGA-----------ARGLEYLHDKAKPPVIYRD 113
S+ED L D N +K A + RGL+Y+H +I+RD
Sbjct: 92 TSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRD 148
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSD 172
LK SN+ ++ ++ DFGLA+ +V+TR Y APE D
Sbjct: 149 LKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVD 203
Query: 173 VYSFGVVLLEILSGR 187
++S G ++ E+L G+
Sbjct: 204 IWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 35/195 (17%)
Query: 8 LLQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPL 65
L Q VA+K+L R + R E+ +L L H N++ L+ + P
Sbjct: 52 LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV------------FTPA 99
Query: 66 GSVEDHLHD-LSPGKKPLDWNTRMKIAAGA-----------ARGLEYLHDKAKPPVIYRD 113
S+ED L D N +K A + RGL+Y+H +I+RD
Sbjct: 100 TSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRD 156
Query: 114 LKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSD 172
LK SN+ ++ ++ DFGLA+ +V+TR Y APE D
Sbjct: 157 LKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVD 211
Query: 173 VYSFGVVLLEILSGR 187
++S G ++ E+L G+
Sbjct: 212 IWSVGCIMAELLQGK 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ + ++D + + PL
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLF 112
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL + H V++RDLK N+L++ KL+DFGLA+ V T+ V
Sbjct: 113 QL--LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 151 MGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T Y APE + + D++S G + E+++ R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ + ++D + + PL
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLF 113
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL + H V++RDLK N+L++ KL+DFGLA+ V T+ V
Sbjct: 114 QL--LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 151 MGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T Y APE + + D++S G + E+++ R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAA 92
HPN++ YC++ R L Y+ L +L DL K D N +++ +
Sbjct: 68 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 93 GAARGLEYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGP 139
A G+ +LH +I+RDLK NIL+ +SDFGL K
Sbjct: 123 QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 140 VGDNTHVST--RVMGTYGYCAPEYAKTG-------QLTLKSDVYSFGVVLLEILSGRKAV 190
G ++ + GT G+ APE + +LT D++S G V ILS K
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 191 DTSKAAAEQSLVAWARPLFQDRTRH--SLIAD 220
K + E +++ L + + H SLIA+
Sbjct: 240 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE 271
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
KIA + LE+LH K VI+RD+K SN+L++ K+ DFG++ G + D+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDI 168
Query: 149 RVMGTYGYCAPEYA----KTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
G Y APE ++KSD++S G+ ++E+ R D+ +Q
Sbjct: 169 DA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY---M 63
+ VAIK+L R + + R + E+L+L + H N++ L+ Y++ M
Sbjct: 50 EKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108
Query: 64 PLGSVE-DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
P + + L ++ + + + +GL+Y+H V++RDLK N+ ++
Sbjct: 109 PFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN 160
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLL 181
K+ DFGLA+ +V TR Y APE + D++S G ++
Sbjct: 161 EDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 182 EILSGR 187
E+L+G+
Sbjct: 216 EMLTGK 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 11 DVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGYCADGDQ---------RLLVY 60
+ AIK++ + RE + EV L+ L HP +V + + ++ +Y
Sbjct: 32 NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91
Query: 61 EYMPLGSVEDHLHDLSPGKKPLDWNTR---MKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
M L E+ L D G+ ++ R + I A +E+LH K +++RDLK S
Sbjct: 92 IQMQLCRKEN-LKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPS 147
Query: 118 NILLDRGYHPKLSDFGLAK-----------LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
NI K+ DFGL L P+ + +V GT Y +PE
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV-GTKLYMSPEQIHGNS 206
Query: 167 LTLKSDVYSFGVVLLEIL 184
+ K D++S G++L E+L
Sbjct: 207 YSHKVDIFSLGLILFELL 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE + D++S G ++ E+L+GR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ +++H N++ L+ +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNV------------FT 93
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYLHDKAKPPVIY 111
P S+E+ D+ + +D N I G+++LH +I+
Sbjct: 94 PQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIH 149
Query: 112 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 171
RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 172 DVYSFGVVLLEILSG 186
D++S GV++ E++ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ + DL KK +D + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGI 103
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 160
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ +++H N++ L+ +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNV------------FT 93
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYLHDKAKPPVIY 111
P S+E+ D+ + +D N I G+++LH +I+
Sbjct: 94 PQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIH 149
Query: 112 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 171
RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 172 DVYSFGVVLLEILSG 186
D++S GV++ E++ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ + DL KK +D + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGI 101
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 158
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAA 92
HPN++ YC++ R L Y+ L +L DL K D N +++ +
Sbjct: 86 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 93 GAARGLEYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGP 139
A G+ +LH +I+RDLK NIL+ +SDFGL K
Sbjct: 141 QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 140 VGDNTHVST--RVMGTYGYCAPEYAKTG---QLTLKSDVYSFGVVLLEILSGRKAVDTSK 194
G GT G+ APE + +LT D++S G V ILS K K
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 195 AAAEQSLVAWARPLFQDRTRH--SLIAD 220
+ E +++ L + + H SLIA+
Sbjct: 258 YSRESNIIRGIFSLDEMKCLHDRSLIAE 285
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAA 92
HPN++ YC++ R L Y+ L +L DL K D N +++ +
Sbjct: 86 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 93 GAARGLEYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGP 139
A G+ +LH +I+RDLK NIL+ +SDFGL K
Sbjct: 141 QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 140 VGDNTHVST--RVMGTYGYCAPEYAKTG---QLTLKSDVYSFGVVLLEILSGRKAVDTSK 194
G GT G+ APE + +LT D++S G V ILS K K
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 195 AAAEQSLVAWARPLFQDRTRH--SLIAD 220
+ E +++ L + + H SLIA+
Sbjct: 258 YSRESNIIRGIFSLDEMKCLHDRSLIAE 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 RTY--THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 107
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 164
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 165 RTY--THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEY---M 63
+ VAIK+L R + + R + E+L+L + H N++ L+ Y++ M
Sbjct: 68 EKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 64 PLGSVE-DHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
P + + + ++ + + + +GL+Y+H V++RDLK N+ ++
Sbjct: 127 PFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN 178
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLL 181
K+ DFGLA+ +V TR Y APE + D++S G ++
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMA 233
Query: 182 EILSGR 187
E+L+G+
Sbjct: 234 EMLTGK 239
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 104
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 105 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 161
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 162 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 99
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 157 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 107
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 164
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 165 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 22 VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 81
V G+ +++ L + NL ++ Y GD L L ED L P +
Sbjct: 129 VNGDSKWIT-TLHYAFQDDNNLYLVMDYYVGGDLLTL------LSKFEDRL----PEEMA 177
Query: 82 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 141
+ M IA + L Y+H RD+K NIL+D H +L+DFG + L +
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKLME 227
Query: 142 DNTHVSTRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSGR 187
D T S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 99
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 157 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 101
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 159 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 99
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 157 RTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ ++D + + PL
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLF 110
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
+GL + H V++RDLK N+L++ KL+DFGLA+ V T+ V
Sbjct: 111 QL--LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 151 MGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T Y APE + + D++S G + E+++ R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 11 DVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVED 70
+ A+K +D++ E +E+L L HPN++ L DG +V E G + D
Sbjct: 49 EFAVKIIDKSKRDPTEE--IEIL-LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLD 105
Query: 71 HLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDRGYHP-- 127
+ +K + + +EYLH + V++RDLK SNIL +D +P
Sbjct: 106 KILR----QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPES 158
Query: 128 -KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
++ DFG AK +N + T T + APE + D++S GV+L L+G
Sbjct: 159 IRICDFGFAK-QLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 99
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 157 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 103
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 102
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 1 MMQVILCLLQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC-ADGDQRLLV 59
+ Q L +VAIK++ ++ NRE + + ++ HPN+V+L + ++GD++ V
Sbjct: 56 VFQAKLVESDEVAIKKVLQDKRFKNRELQI----MRIVKHPNVVDLKAFFYSNGDKKDEV 111
Query: 60 YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA----GAARGLEYLHDKAKPPVIYRDLK 115
+ + L V + ++ S L M + R L Y+H + +RD+K
Sbjct: 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIK 168
Query: 116 CSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE--YAKTGQLTLKSD 172
N+LLD KL DFG AK+ G+ + + + Y APE + T T D
Sbjct: 169 PQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYYRAPELIFGATN-YTTNID 224
Query: 173 VYSFGVVLLEILSGR 187
++S G V+ E++ G+
Sbjct: 225 IWSTGCVMAELMQGQ 239
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 101
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 101
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 158
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 103
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 102
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 159
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 28/107 (26%)
Query: 97 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS--------- 147
L Y+H + +I+R+LK NI +D + K+ DFGLAK N H S
Sbjct: 128 ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK------NVHRSLDILKLDSQ 178
Query: 148 ---------TRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEIL 184
T +GT Y A E TG K D YS G++ E +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 104
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 105 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 161
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 162 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 102
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 160 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 99
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 157 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 100
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGI 101
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 159 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM--PLGSVEDHLHDLSPGKKPLDWNTRM 88
E+ +L L+HPN+V L+ ++ LV+E++ L + D L+ PL +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDA-SALTGIPLPLIKSYLF 113
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 148
++ +GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 114 QLL----QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 149 RVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
V T Y APE + + D++S G + E+++ R
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 10 QDVAIKQLD--RNGVQGNREFLVEVLMLSLLHH-PNLVNLIGYCADGDQRLLVYEYMPLG 66
Q+ A K L R G E L E+ +L L P ++NL + + +L+ EY G
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 67 SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY- 125
+ L + + N +++ G+ YLH + +++ DLK NILL Y
Sbjct: 115 EIFSLC--LPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYP 169
Query: 126 --HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEI 183
K+ DFG+++ +G + +MGT Y APE +T +D+++ G++ +
Sbjct: 170 LGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYML 226
Query: 184 LS 185
L+
Sbjct: 227 LT 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 90/221 (40%), Gaps = 50/221 (22%)
Query: 13 AIKQLDRNGV-QGN----REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
AIK +++N + Q N EV ++ LHHPN+ L D LV E G
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 68 VEDHLH---DLSPGK-----------------------------KPLDWNTRMKIAAGAA 95
+ D L+ D S GK + LD+ R K+ +
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
Query: 96 R----GLEYLHDKAKPPVIYRDLKCSNILL--DRGYHPKLSDFGLAKLGPVGDNTHV--S 147
R L YLH++ + +RD+K N L ++ + KL DFGL+K +N
Sbjct: 175 RQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 148 TRVMGTYGYCAPEYAKTGQLTL--KSDVYSFGVVLLEILSG 186
T GT + APE T + K D +S GV+L +L G
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEV---LMLSLLH-------HPNLVNLIGYCADGDQRLLVYE 61
VAIK + RN V G V L ++LL HP ++ L+ + + +LV E
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
Query: 62 Y-MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL 120
+P + D++ + K PL +++ H + V++RD+K NIL
Sbjct: 119 RPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENIL 171
Query: 121 LD-RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL-TLKSDVYSFGV 178
+D R KL DFG L + D + T GT Y PE+ Q L + V+S G+
Sbjct: 172 IDLRRGCAKLIDFGSGAL--LHDEPY--TDFDGTRVYSPPEWISRHQYHALPATVWSLGI 227
Query: 179 VLLEILSGRKAVDTSKAAAEQSL 201
+L +++ G + + E L
Sbjct: 228 LLYDMVCGDIPFERDQEILEAEL 250
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 37/172 (21%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E H+H D T M
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFE---------HVHQ--------DLKTFMDA 93
Query: 91 AAGAA--------------RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 136
+A +GL + H V++RDLK N+L++ KL+DFGLA+
Sbjct: 94 SALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
Query: 137 LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
V T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 151 AFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 39/212 (18%)
Query: 40 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAA 92
HPN++ YC++ R L Y+ L +L DL K D N +++ +
Sbjct: 68 HPNVIRY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 93 GAARGLEYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGP 139
A G+ +LH +I+RDLK NIL+ +SDFGL K
Sbjct: 123 QIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 140 VGDNTHVST--RVMGTYGYCAPEYAKTG-------QLTLKSDVYSFGVVLLEILSGRKAV 190
G GT G+ APE + +LT D++S G V ILS K
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 191 DTSKAAAEQSLVAWARPLFQDRTRH--SLIAD 220
K + E +++ L + + H SLIA+
Sbjct: 240 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E++ + L P +V L G +G + E + GS L L + L + +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS----LGQLVKEQGCLPEDRALYY 171
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLAK-LGP--VGDNTHV 146
A GLEYLH + +++ D+K N+LL G H L DFG A L P +G +
Sbjct: 172 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE K DV+S ++L +L+G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLI-GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E + +L HP++V L+ Y +DG +V+E+M + + +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHV 146
L Y HD +I+RD+K N+LL + KL DFG+A +G++ V
Sbjct: 135 YMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLV 189
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ +GT + APE K DV+ GV+L +LSG
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 16/251 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
EV +L L H N+V L LV+EY+ ++ +L D ++ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG---NIINMHNVKLF 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 150
RGL Y H + V++RDLK N+L++ KL+DFGLA+ + T+ + V
Sbjct: 106 LFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV 162
Query: 151 MGTYGYCAPEY-AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLF 209
T Y P+ + + + D++ G + E+ +GR S + +
Sbjct: 163 --TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 210 QDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYE 269
+ T ++++ E + P+ Y+A A+ + P + AD++T L +
Sbjct: 221 TEETWPGILSNEEFKTYNYPK--YRAEALLS----HAPRLDSDGADLLTKLLQFEGRNRI 274
Query: 270 SDAEKVQSPCL 280
S + ++ P
Sbjct: 275 SAEDAMKHPFF 285
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 35/195 (17%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ +++H N++ L+ +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNV------------FT 93
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYLHDKAKPPVIY 111
P S+E+ D+ + +D N I G+++LH +I+
Sbjct: 94 PQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIH 149
Query: 112 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 171
RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 172 DVYSFGVVLLEILSG 186
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 10 QDVAIKQLDRN--GVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPL 65
D+ +K L + +R+F E L + HPN++ ++G C L+ +MP
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
GS+ + LH+ + +D + +K A ARG+ +LH +P + L ++++D
Sbjct: 94 GSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDM 150
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAKTGQLTLK--SDVYSFGVVLLE 182
++S + V + R M + APE K + T + +D++SF V+L E
Sbjct: 151 TARIS------MADVKFSFQSPGR-MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWE 203
Query: 183 ILS 185
+++
Sbjct: 204 LVT 206
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 35/195 (17%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ +++H N++ L+ +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNV------------FT 93
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYLHDKAKPPVIY 111
P S+E+ D+ + +D N I G+++LH +I+
Sbjct: 94 PQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIH 149
Query: 112 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 171
RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 172 DVYSFGVVLLEILSG 186
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E++ + L P +V L G +G + E + GS L L + L + +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS----LGQLVKEQGCLPEDRALYY 190
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLAK-LGP--VGDNTHV 146
A GLEYLH + +++ D+K N+LL G H L DFG A L P +G +
Sbjct: 191 LGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE K DV+S ++L +L+G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L HPN++ L + LV E + G + D + + + +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYSERDA 150
Query: 91 AAGAARGLE---YLHDKAKPPVIYRDLKCSNILLDR---GYHPKLSDFGLAKLGPVGDNT 144
A + LE YLH+ +++RDLK N+L K++DFGL+K + ++
Sbjct: 151 ADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQ 204
Query: 145 HVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ V GT GYCAPE + + D++S G++ +L G
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYC---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
L E+ +L LL H N+VNLI C A R Y+ E HDL+ L N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE---HDLAG----LLSN 117
Query: 86 TRMKIAAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 137
+K + GL Y+H + +++RD+K +N+L+ R KL+DFGLA+
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 138 GPVGDNTH---VSTRVMGTYGYCAPE 160
+ N+ RV+ T Y PE
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPE 199
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E+ +L L+HPN+V L+ ++ LV+E++ DL KK +D + I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD--------QDL---KKFMDASALTGI 103
Query: 91 AAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD 142
+ GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 143 NTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 187
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 161 RTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEY 62
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
+ + ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 106 LVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 183 ------ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG--- 152
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVA 204
Query: 153 TYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
T Y APE D++S G ++ E+L+GR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEY 62
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 98
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
+ + ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 99 LVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 153
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 154 SDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 183 ------ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 211 MVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG--- 152
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 153 TYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
T Y APE D++S G ++ E+L+GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG--- 152
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 153 TYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
T Y APE D++S G ++ E+L+GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DFGL + +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEY 62
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
+ + ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 106 LVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 183 ------ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ D+GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 13 AIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
A+K + + ++G + E+ +L + H N+V L + LV + + G + D
Sbjct: 51 AVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDR 110
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPK 128
+ + + D +T ++ A + YLH + +++RDLK N+L D
Sbjct: 111 IVEKGFYTEK-DASTLIRQVLDA---VYYLH---RMGIVHRDLKPENLLYYSQDEESKIM 163
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+SDFGL+K+ GD V + GT GY APE + D +S GV+ +L G
Sbjct: 164 ISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHV 146
KIA + LE+LH K VI+RD+K SN+L++ K DFG++ + V +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 199
+ PE + G ++KSD++S G+ +E+ R D+ +Q
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG--- 152
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 180
Query: 153 TYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
T Y APE D++S G ++ E+L+GR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 88 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK----------- 136
+ I A +E+LH K +++RDLK SNI K+ DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 137 LGPV-GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 184
L P+ TH +GT Y +PE + K D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYC---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
L E+ +L LL H N+VNLI C A R Y+ E HDL+ L N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSN 117
Query: 86 TRMKIAAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 137
+K + GL Y+H + +++RD+K +N+L+ R KL+DFGLA+
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 138 GPVGDNTH---VSTRVMGTYGYCAPE 160
+ N+ RV+ T Y PE
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPE 199
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 21/201 (10%)
Query: 11 DVAIKQLD--RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV 68
+VAI+ +D R+ + F EV+ H N+V +G C ++ ++
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 69 EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPK 128
+ D K LD N +IA +G+ YLH K ++++DLK N+ D G
Sbjct: 117 YSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVV 169
Query: 129 LSDFGLAKLGPVGDNTHVSTRVMGTYGY---CAPEYAKTGQ---------LTLKSDVYSF 176
++DFGL + V ++ G+ APE + + SDV++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 177 GVVLLEILSGRKAVDTSKAAA 197
G + E+ + T A A
Sbjct: 230 GTIWYELHAREWPFKTQPAEA 250
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 3 QVILC------LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADG 53
Q I+C L ++VAIK+L R N R + E++++ ++H N++ L+
Sbjct: 37 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV---- 91
Query: 54 DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYL 101
+ P S+E+ D+ + +D N I G+++L
Sbjct: 92 --------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 102 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 161
H +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEV 196
Query: 162 AKTGQLTLKSDVYSFGVVLLEILSG 186
D++S G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------------GLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N I G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + + V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILS------GRKAVDTSKAAAEQ 199
++S G ++ E++ GR +D EQ
Sbjct: 208 IWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVSTRVMGT 153
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ + + G
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 154 YGYCAPEYAKTGQLTLKS-------DVYSFGVVLLEILSGR 187
Y A + + ++ L S DV+S G +L E+ R
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYC---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
L E+ +L LL H N+VNLI C A R Y+ E HDL+ L N
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSN 116
Query: 86 TRMKIAAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 137
+K + GL Y+H + +++RD+K +N+L+ R KL+DFGLA+
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA 173
Query: 138 GPVGDNTH---VSTRVMGTYGYCAPE 160
+ N+ RV+ T Y PE
Sbjct: 174 FSLAKNSQPNRYXNRVV-TLWYRPPE 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 29 LVEVLMLSLLHHPNLVNLIGYC---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
L E+ +L LL H N+VNLI C A R Y+ E HDL+ L N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSN 117
Query: 86 TRMKIAAGAAR--------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 137
+K + GL Y+H + +++RD+K +N+L+ R KL+DFGLA+
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 138 GPVGDNTH---VSTRVMGTYGYCAPE 160
+ N+ RV+ T Y PE
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPE 199
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 49 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 95
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 96 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 151
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 152 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 208
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 209 IWSVGCIMGEMIKG 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 7 CLLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEY 62
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 63 MPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD 122
+ + ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 106 LVMELMDANLXQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 123 RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 183 ------ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
M +A + L Y+H RD+K N+LLD H +L+DFG + L D T
Sbjct: 183 EMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQ 232
Query: 147 STRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSGR 187
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 233 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ FGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL--------------IGYCADGDQRL 57
VAIK++ Q + L E+ ++ L H N+V + +G + +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 58 LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCS 117
+V EYM E L ++ L+ + R+ RGL+Y+H V++RDLK +
Sbjct: 99 IVQEYM-----ETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIHSAN---VLHRDLKPA 149
Query: 118 NILLD-RGYHPKLSDFGLAKLGP--VGDNTHVSTRVMGTYGYCAPEYAKT-GQLTLKSDV 173
N+ ++ K+ DFGLA++ H+S ++ T Y +P + T D+
Sbjct: 150 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDM 208
Query: 174 YSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 219
++ G + E+L+G+ + + L+ + P+ + R L++
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLS 254
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 31 EVLMLSLLHHPNLVNLIG--YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 88
E+ +L L H N++ L+ Y + + +V EY G E + D P K+
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKR-FPVCQAH 112
Query: 89 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVS 147
GLEYLH + ++++D+K N+LL G K+S G+A+ L P +
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 148 TRVMGTYGYCAPEYAKTGQLT---LKSDVYSFGVVLLEILSG 186
T G+ + PE A G T K D++S GV L I +G
Sbjct: 170 TS-QGSPAFQPPEIA-NGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + LL HPN+V L ++ LV++ + G + + + ++ +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADA 132
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVS 147
+ + LE ++ + +++RDLK N+LL +G KL+DFGLA V
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAW 190
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE + D+++ GV+L +L G
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 87 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 146
M +A + L Y+H RD+K N+LLD H +L+DFG + L D T
Sbjct: 199 EMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQ 248
Query: 147 STRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSGR 187
S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 249 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ DF LA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 102 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 156
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 157 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 214 HKILFPGRDYIDQWNKVIEQ 233
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 94
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 95 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 150
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + + V+ Y Y APE D
Sbjct: 151 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVD 207
Query: 173 VYSFGVVLLEILS------GRKAVDTSKAAAEQ 199
++S G ++ E++ GR +D EQ
Sbjct: 208 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 103 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 158 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 215 HKILFPGRDYIDQWNKVIEQ 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 102
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 103 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 158 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 215 HKILFPGRDYIDQWNKVIEQ 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 107
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 108 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 162
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 163 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 219
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 220 HKILFPGRDYIDQWNKVIEQ 239
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 53 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 99
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 100 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 155
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 156 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 212
Query: 173 VYSFGVVLLEILS------GRKAVDTSKAAAEQ 199
++S G ++ E++ GR +D EQ
Sbjct: 213 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 110 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 165 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 222 HKILFPGRDYIDQWNKVIEQ 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 109
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 110 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 165 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 222 HKILFPGRDYIDQWNKVIEQ 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 109 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 221 HKILFPGRDYIDQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 109 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 221 HKILFPGRDYIDQWNKVIEQ 240
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVSTRVMGT 153
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ + + G
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 154 YGYCAPEYAKTGQLTLKS-------DVYSFGVVLLEILSGR 187
+ A + + ++ L S DV+S G +L E+ R
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y+
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
+ ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 145 VMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 199
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 200 DCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 183 -----ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 10 QDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYMPL 65
++VAIK+L R N R + E++++ ++H N+++L+ + Y+ +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 109 ELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDX 163
Query: 126 HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE--- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 183 ---ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 221 HKILFPGRDYIDQWNKVIEQ 240
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 42 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 88
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 89 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 144
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + ++ V+ Y Y APE D
Sbjct: 145 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVD 201
Query: 173 VYSFGVVLLEILS------GRKAVDTSKAAAEQ 199
++S G ++ E++ GR +D EQ
Sbjct: 202 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVS------ 147
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 148 TRVMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVLLEILSGR 187
T + T Y APE T + + DV+S G +L E+ R
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRLLVYEYM 63
L ++VAIK+L R N R + E++++ ++H N+++L+ + Y+
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 64 PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR 123
+ ++ +L + + LD + G+++LH +I+RDLK SNI++
Sbjct: 145 VMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKS 199
Query: 124 GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLE- 182
K+ DFGLA+ G + ++ V+ Y Y APE D++S G ++ E
Sbjct: 200 DCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 183 -----ILSGRKAVDTSKAAAEQ 199
+ GR +D EQ
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 48 GYCADGDQRLLVYEYMPLGSV---EDHLHDLSPGKKPLDWNTRMK-IAAGAARGLEYLHD 103
G + D+ ++YEYM S+ +++ L +K I Y+H+
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 104 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY-- 161
+ + +RD+K SNIL+D+ KLSDFG ++ + D +R GTY + PE+
Sbjct: 170 EKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY--MVDKKIKGSR--GTYEFMPPEFFS 223
Query: 162 AKTGQLTLKSDVYSFGVVL 180
++ K D++S G+ L
Sbjct: 224 NESSYNGAKVDIWSLGICL 242
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 11 DVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
+VA+K+L R N R + E+++L ++H N+++L+ + P +
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNV------------FTPQKT 97
Query: 68 VEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYRDLK 115
+E+ D+ + +D N RM + G+++LH +I+RDLK
Sbjct: 98 LEE-FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLK 153
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
SNI++ K+ DFGLA+ N ++ V+ Y Y APE D++S
Sbjct: 154 PSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRY-YRAPEVILGMGYAANVDIWS 210
Query: 176 FGVVLLEILSG 186
G ++ E++ G
Sbjct: 211 VGCIMGELVKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 35/194 (18%)
Query: 8 LLQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMP 64
L ++VAIK+L R N R + E++++ ++H N++ L+ + P
Sbjct: 50 LERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNV------------FTP 96
Query: 65 LGSVEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYR 112
S+E+ D+ + +D N RM + G+++LH +I+R
Sbjct: 97 QKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHR 152
Query: 113 DLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSD 172
DLK SNI++ K+ DFGLA+ G + + V+ Y Y APE D
Sbjct: 153 DLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVD 209
Query: 173 VYSFGVVLLEILSG 186
++S G ++ E++ G
Sbjct: 210 IWSVGCIMGEMIKG 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 11 DVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
+VA+K+L R N R + E+++L ++H N+++L+ + P +
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNV------------FTPQKT 95
Query: 68 VEDHLHDLSPGKKPLDWN-----------TRMK-IAAGAARGLEYLHDKAKPPVIYRDLK 115
+E+ D+ + +D N RM + G+++LH +I+RDLK
Sbjct: 96 LEE-FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLK 151
Query: 116 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 175
SNI++ K+ DFGLA+ N ++ V+ Y Y APE D++S
Sbjct: 152 PSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRY-YRAPEVILGMGYKENVDIWS 208
Query: 176 FGVVLLEILSG 186
G ++ E++ G
Sbjct: 209 VGCIMGELVKG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE D++S G ++ E+L+GR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + LL HPN+V L ++ LV++ + G + + + ++ +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADA 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ + LE ++ +++RDLK N+LL +G KL+DFGLA V +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAW 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE + D+++ GV+L +L G
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + LL HPN+V L ++ LV++ + G + + + ++ +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADA 105
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVS 147
+ + LE ++ +++RDLK N+LL +G KL+DFGLA V +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAW 163
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE + D+++ GV+L +L G
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG-YCADGDQRL-LVYEYMP--LGSV 68
A+KQ++ G+ + E+ +L L HPN+++L + + D+++ L+++Y L +
Sbjct: 52 ALKQIEGTGISMSA--CREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHI 109
Query: 69 EDHLHDLSPGKKPLDWNTRM--KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL----- 121
KKP+ M + G+ YLH V++RDLK +NIL+
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGP 166
Query: 122 DRGYHPKLSDFGLAK-----LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYS 175
+RG K++D G A+ L P+ D V+ T+ Y APE + K+ D+++
Sbjct: 167 ERG-RVKIADMGFARLFNSPLKPLAD----LDPVVVTFWYRAPELLLGARHYTKAIDIWA 221
Query: 176 FGVVLLEILSG 186
G + E+L+
Sbjct: 222 IGCIFAELLTS 232
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K++ D GV + L E+ +L L H N+V L + LV+E+
Sbjct: 30 VALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD--- 84
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+D LD +GL + H + V++RDLK N+L++R
Sbjct: 85 -QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGEL 140
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSG 186
KL+DFGLA+ G + + T Y P+ +L S D++S G + E+ +
Sbjct: 141 KLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 187 RKAV 190
+ +
Sbjct: 199 ARPL 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + + E++ L HPN+V +V EY G + +
Sbjct: 47 VAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R G+ Y H V +RDLK N LLD P K+
Sbjct: 106 I--CNAGRFSED-EARF-FFQQLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
+DFG +K + +GT Y APE + K +DV+S GV L +L G
Sbjct: 159 ADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + LL HPN+V L ++ L+++ + G + + + ++ +
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-------VAREYYSEADA 123
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVS 147
+ + LE + + V++RDLK N+LL +G KL+DFGLA V
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAW 181
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE + D+++ GV+L +L G
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E++ + L P +V L G +G + E + GS+ + + G P D +
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYY 155
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHV 146
A GLEYLH + +++ D+K N+LL G L DFG A L P +G +
Sbjct: 156 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE K D++S ++L +L+G
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 26 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 85
R+FL EV+ HP++V + + D+ Y+ + V S G+K
Sbjct: 130 RQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK----- 178
Query: 86 TRMKIAAGAARGLE------YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG-LAKLG 138
+ +A A LE YLH ++Y DLK NI+L KL D G ++++
Sbjct: 179 --LPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTE-EQLKLIDLGAVSRIN 232
Query: 139 PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 180
G + GT G+ APE +TG T+ +D+Y+ G L
Sbjct: 233 SFG-------YLYGTPGFQAPEIVRTGP-TVATDIYTVGRTL 266
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 96 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 155
+GL Y+H +I+RDLK N+ ++ K+ DFGLA+ V TR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 156 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 187
Y APE + T D++S G ++ E+++G+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E++ + L P +V L G +G + E + GS+ + + G P D +
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYY 169
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHV 146
A GLEYLH + +++ D+K N+LL G L DFG A L P +G +
Sbjct: 170 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE K D++S ++L +L+G
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E++ + L P +V L G +G + E + GS+ + + G P D +
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYY 171
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHV 146
A GLEYLH + +++ D+K N+LL G L DFG A L P +G +
Sbjct: 172 LGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ GT + APE K D++S ++L +L+G
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 111 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 170
+RD+K NIL+ L DFG+A T + V GT Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 171 SDVYSFGVVLLEILSG 186
+D+Y+ VL E L+G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 97 GLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 153
++YLH+ +++RDLK N+L + ++DFGL+K+ G + + GT
Sbjct: 118 AVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGT 170
Query: 154 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GY APE + D +S GV+ +L G
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + E++ L HPN+V ++ EY G + +
Sbjct: 48 VAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER 106
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R + G+ Y H + +RDLK N LLD P K+
Sbjct: 107 I--CNAGRFSED-EARFFFQQLLS-GVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKI 159
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
DFG +K + + +GT Y APE + K +DV+S GV L +L G
Sbjct: 160 CDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + + E++ L HPN+V +V EY G + +
Sbjct: 46 VAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 104
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R G+ Y H V +RDLK N LLD P K+
Sbjct: 105 I--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKI 157
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
DFG +K V + ST +GT Y APE + K +DV+S GV L +L G
Sbjct: 158 CDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 38 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
L HPN+V L + LV++ + G + D+ + + + I
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILES 140
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 154
+ Y H +++R+LK N+LL +G KL+DFGLA V D + GT
Sbjct: 141 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHGFAGTP 194
Query: 155 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GY +PE K + D+++ GV+L +L G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 12 VAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 67
VA+K++ D GV + L E+ +L L H N+V L + LV+E+
Sbjct: 30 VALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD--- 84
Query: 68 VEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP 127
+D LD +GL + H + V++RDLK N+L++R
Sbjct: 85 -QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGEL 140
Query: 128 KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEI 183
KL++FGLA+ G + + T Y P+ +L S D++S G + E+
Sbjct: 141 KLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 4 VILCLLQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYE 61
V LC + A K ++ + +++ E + LL H N+V L ++ LV++
Sbjct: 24 VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFD 83
Query: 62 YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 121
+ G + + + ++ + + + LE + + V++RDLK N+LL
Sbjct: 84 LVTGGELFEDI-------VAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLL 136
Query: 122 D---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGV 178
+G KL+DFGLA V + GT GY +PE + D+++ GV
Sbjct: 137 ASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGV 194
Query: 179 VLLEILSG 186
+L +L G
Sbjct: 195 ILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 38 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
L HPN+V L + LV++ + G + D+ + + + I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILES 117
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 154
+ Y H +++R+LK N+LL +G KL+DFGLA + H GT
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 155 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GY +PE K + D+++ GV+L +L G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + L HPN+V L + LV++ + G + D+ + + + I
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCI 110
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVS 147
+ Y H +++R+LK N+LL +G KL+DFGLA + H
Sbjct: 111 QQ-ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 164
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE K + D+++ GV+L +L G
Sbjct: 165 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 31 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 90
E + LL HPN+V L ++ L+++ + G + + + ++ +
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-------VAREYYSEADA 112
Query: 91 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVS 147
+ + LE + + V++R+LK N+LL +G KL+DFGLA V
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAW 170
Query: 148 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GT GY +PE + D+++ GV+L +L G
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 38 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 97
L HPN+V L + LV++ + G + D+ + + + I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILES 117
Query: 98 LEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 154
+ Y H +++R+LK N+LL +G KL+DFGLA + H GT
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTP 171
Query: 155 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GY +PE K + D+++ GV+L +L G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 39/208 (18%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGY---CADGDQRLL----VYEYMP 64
VAIK++ ++ NRE + + L++LHHPN+V L Y + D+R + V EY+P
Sbjct: 51 VAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109
Query: 65 LGSVEDHLHDLSPGKKPLDWNTRMKIAA----------GAARGLEYLHDKAKPPVIYRDL 114
D LH R ++A R + LH + V +RD+
Sbjct: 110 -----DTLHRCCRNY------YRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDI 157
Query: 115 KCSNILLDRGYHP-KLSDFGLA-KLGPVGDNT-HVSTRVMGTYGYCAPEYAKTGQ-LTLK 170
K N+L++ KL DFG A KL P N ++ +R Y APE Q T
Sbjct: 158 KPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTA 212
Query: 171 SDVYSFGVVLLEILSGRKAVDTSKAAAE 198
D++S G + E++ G +A +
Sbjct: 213 VDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLI-GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E + +L HP++V L+ Y +DG +V+E+M + + +
Sbjct: 78 EASICHMLKHPHIVELLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHV 146
L Y HD +I+RD+K +LL + KL FG+A +G++ V
Sbjct: 137 YMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLV 191
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ +GT + APE K DV+ GV+L +LSG
Sbjct: 192 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 31 EVLMLSLLHHPNLVNLI-GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 89
E + +L HP++V L+ Y +DG +V+E+M + + +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 90 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHV 146
L Y HD +I+RD+K +LL + KL FG+A +G++ V
Sbjct: 135 YMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLV 189
Query: 147 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
+ +GT + APE K DV+ GV+L +LSG
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + E++ L HPN+V +V EY G + +
Sbjct: 47 VAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R G+ Y H V +RDLK N LLD P K+
Sbjct: 106 I--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
DFG +K + +GT Y APE + K +DV+S GV L +L G
Sbjct: 159 CDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 22 VQGNREFLV--EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGK 79
V+G + LV E+ +L++ H N+++L ++ ++++E++ S D ++
Sbjct: 40 VKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI---SGLDIFERINTSA 96
Query: 80 KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKL 137
L+ + L++LH + + D++ NI+ R K+ +FG A+
Sbjct: 97 FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153
Query: 138 GPVGDNTHVSTRVMGTY-GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
GDN R++ T Y APE + ++ +D++S G ++ +LSG
Sbjct: 154 LKPGDNF----RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K++ + V+ F E+ ++ L HPN++ L D LV E G L
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG----EL 93
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL--DRGYHP-KL 129
+ K+ + +I + Y H K V +RDLK N L D P KL
Sbjct: 94 FERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKL 150
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
DFGLA G + T+V GT Y +P+ + G + D +S GV++ +L G
Sbjct: 151 IDFGLAARFKPGK--MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ +VY + L V +
Sbjct: 48 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 161 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 185 SGR 187
G+
Sbjct: 218 LGQ 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 13 AIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL 72
A K++ + V+ F E+ ++ L HPN++ L D LV E G L
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG----EL 110
Query: 73 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL--DRGYHP-KL 129
+ K+ + +I + Y H K V +RDLK N L D P KL
Sbjct: 111 FERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKL 167
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 186
DFGLA G + T+V GT Y +P+ + G + D +S GV++ +L G
Sbjct: 168 IDFGLAARFKPGK--MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 110 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 169
++RD+K NILLDR H +L+DFG + L D T S +GT Y +PE +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 170 -------KSDVYSFGVVLLEILSGR 187
+ D ++ GV E+ G+
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 10 QDVAIKQLDRN--GVQGNREFLVEVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPL 65
D+ +K L + +R+F E L + HPN++ ++G C L+ + P
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPY 93
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
GS+ + LH+ + +D + +K A ARG +LH +P + L ++ +D
Sbjct: 94 GSLYNVLHEGT--NFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDX 150
Query: 126 HPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAKTGQLTLK--SDVYSFGVVL 180
++S D + P R + APE K + T + +D +SF V+L
Sbjct: 151 TARISXADVKFSFQSP--------GRXYAP-AWVAPEALQKKPEDTNRRSADXWSFAVLL 201
Query: 181 LEILS 185
E+++
Sbjct: 202 WELVT 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + + E++ L HPN+V +V EY G + +
Sbjct: 47 VAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R G+ Y H V +RDLK N LLD P K+
Sbjct: 106 I--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
FG +K V + ST +GT Y APE + K +DV+S GV L +L G
Sbjct: 159 CAFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ + NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 48 VAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLE 182
KL DFG AK G+ +++ +R Y APE T DV+S G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 183 ILSGR 187
+L G+
Sbjct: 216 LLLGQ 220
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 232
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 292
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 293 RPTFEEIQNHPWMQD 307
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 82 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 194
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 195 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 248
Query: 182 EILSGR 187
E+L G+
Sbjct: 249 ELLLGQ 254
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 185
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSD 245
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 246 RPTFEEIQNHPWMQD 260
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 102/275 (37%), Gaps = 46/275 (16%)
Query: 26 REFLVEVLMLSLLHHPNLVNL----IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 81
+ L E+ +L+ HHPN++ L + + +L + + + +HD P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 82 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 141
M GL LH+ V++RDL NILL + DF LA+
Sbjct: 134 QHIQYFMY---HILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 142 DN-THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR------------ 187
N TH T Y APE + T D++S G V+ E+ + +
Sbjct: 188 ANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 188 -KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQ 246
K V+ + +V ++ P +D R+SL P R + +
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSL-------SNVPARAWTAVV---------- 286
Query: 247 PDMRPVIADVVTALAYLASQKYESDAEKVQSPCLD 281
P PV D++ + Q+ S + ++ P +
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 76 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 132 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 188
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 189 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 242
Query: 182 EILSGR 187
E+L G+
Sbjct: 243 ELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 84 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 140 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 196
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 197 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 250
Query: 182 EILSGR 187
E+L G+
Sbjct: 251 ELLLGQ 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 189
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 249
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 250 RPTFEEIQNHPWMQD 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 217
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSD 277
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 217
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSD 277
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 190
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 250
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 251 RPTFEEIQNHPWMQD 265
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 218
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSD 278
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 53 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 108
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 109 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 165
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 166 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 219
Query: 182 EILSGR 187
E+L G+
Sbjct: 220 ELLLGQ 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 190
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 250
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 251 RPTFEEIQNHPWMQD 265
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 134 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 188
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 248
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 249 RPTFEEIQNHPWMQD 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 170 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 224
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 284
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 285 RPTFEEIQNHPWMQD 299
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ + NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 48 VAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLE 182
KL DFG AK G+ +++ +R Y APE T DV+S G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 183 ILSGR 187
+L G+
Sbjct: 216 LLLGQ 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 232
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 292
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 293 RPTFEEIQNHPWMQD 307
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 86 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 141
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 142 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 198
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 199 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 252
Query: 182 EILSGR 187
E+L G+
Sbjct: 253 ELLLGQ 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 136 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 190
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 250
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 251 RPTFEEIQNHPWMQD 265
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 61 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 116
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 117 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 173
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLE 182
KL DFG AK G+ +++ +R Y APE T DV+S G VL E
Sbjct: 174 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAE 228
Query: 183 ILSGR 187
+L G+
Sbjct: 229 LLLGQ 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 135 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 189
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 249
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 250 RPTFEEIQNHPWMQD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 127 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 182
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 183 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 239
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLL 181
KL DFG AK G+ +++ +R Y APE + T T DV+S G VL
Sbjct: 240 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGAT-DYTSSIDVWSAGCVLA 293
Query: 182 EILSGR 187
E+L G+
Sbjct: 294 ELLLGQ 299
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 218
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSD 278
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 204
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 264
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 265 RPTFEEIQNHPWMQD 279
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 185
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 245
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 246 RPTFEEIQNHPWMQD 260
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 101/274 (36%), Gaps = 44/274 (16%)
Query: 26 REFLVEVLMLSLLHHPNLVNL----IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 81
+ L E+ +L+ HHPN++ L + + +L + + + +HD P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 82 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 141
M GL LH+ V++RDL NILL + DF LA+
Sbjct: 134 QHIQYFMY---HILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 142 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR------------- 187
N T + Y APE + T D++S G V+ E+ + +
Sbjct: 188 AN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244
Query: 188 KAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQP 247
K V+ + +V ++ P +D R+SL P R + + P
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSL-------SNVPARAWTAVV----------P 287
Query: 248 DMRPVIADVVTALAYLASQKYESDAEKVQSPCLD 281
PV D++ + Q+ S + ++ P +
Sbjct: 288 TADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 205
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 265
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 266 RPTFEEIQNHPWMQD 280
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH 71
VA+K ++R G + + E++ L HPN+V +V EY G + +
Sbjct: 47 VAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 72 LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP--KL 129
+ + G+ D R G+ Y H V +RDLK N LLD P K+
Sbjct: 106 I--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKI 158
Query: 130 SDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK-SDVYSFGVVLLEILSG 186
FG +K + +GT Y APE + K +DV+S GV L +L G
Sbjct: 159 CAFGYSKSSVLHSQ---PKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 48 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLE 182
KL DFG AK G+ +++ +R Y APE T DV+S G VL E
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 183 ILSGR 187
+L G+
Sbjct: 216 LLLGQ 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 217
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD 277
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 60 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 172
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLLEI 183
KL DFG AK G+ + + + Y APE + T T DV+S G VL E+
Sbjct: 173 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGAT-DYTSSIDVWSAGCVLAEL 228
Query: 184 LSGR 187
L G+
Sbjct: 229 LLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 56 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 111
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 112 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 168
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 169 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
Query: 185 SGR 187
G+
Sbjct: 226 LGQ 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 82 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 194
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE--YAKTGQLTLKSDVYSFGVVLLEI 183
KL DFG AK G+ + + + Y APE + T T DV+S G VL E+
Sbjct: 195 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGAT-DYTSSIDVWSAGCVLAEL 250
Query: 184 LSGR 187
L G+
Sbjct: 251 LLGQ 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 67 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 122
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 123 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 179
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 180 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
Query: 185 SGR 187
G+
Sbjct: 237 LGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 48 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 161 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 185 SGR 187
G+
Sbjct: 218 LGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 49 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 104
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 105 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 161
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 162 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
Query: 185 SGR 187
G+
Sbjct: 219 LGQ 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 60 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 172
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 173 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 185 SGR 187
G+
Sbjct: 230 LGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 48 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 160
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 161 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 185 SGR 187
G+
Sbjct: 218 LGQ 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 158 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 212
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 272
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 273 RPTFEEIQNHPWMQD 287
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVYEYMPLGSVED 70
VAIK++ ++ NRE + + L H N+V L + + G+++ VY + L V +
Sbjct: 52 VAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 107
Query: 71 HLHDL----SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYH 126
++ + S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 108 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTA 164
Query: 127 P-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEIL 184
KL DFG AK G+ + + + Y APE T DV+S G VL E+L
Sbjct: 165 VLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
Query: 185 SGR 187
G+
Sbjct: 222 LGQ 224
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 163 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 217
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSD 277
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 131 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 185
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 245
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 246 RPTFEEIQNHPWMQD 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 218
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSD 278
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 164 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 218
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSD 278
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 178 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 232
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 292
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 293 RPTFEEIQNHPWMQD 307
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 205
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPXD 265
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 266 RPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 150 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 204
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 264
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 265 RPTFEEIQNHPWMQD 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 151 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 205
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 265
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 266 RPTFEEIQNHPWMQD 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 28/135 (20%)
Query: 109 VIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 166
V++RD+K NIL+D RG KL DFG L + D V T GT Y PE+ + +
Sbjct: 183 VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPEWIRYHR 237
Query: 167 LTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA------- 205
+S V+S G++L EI+ G+ + Q L+ W
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSD 297
Query: 206 RPLFQDRTRHSLIAD 220
RP F++ H + D
Sbjct: 298 RPTFEEIQNHPWMQD 312
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 12 VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL-IGYCADGDQRLLVY-----EYMPL 65
VAIK++ + NRE + + L H N+V L + + G+++ VY +Y+P
Sbjct: 48 VAIKKVLQGKAFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP- 102
Query: 66 GSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGY 125
+V S K+ L R L Y+H + +RD+K N+LLD
Sbjct: 103 ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDT 159
Query: 126 HP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-KTGQLTLKSDVYSFGVVLLEI 183
KL DFG AK G+ + + + Y APE T DV+S G VL E+
Sbjct: 160 AVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 184 LSGR 187
L G+
Sbjct: 217 LLGQ 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,697,744
Number of Sequences: 62578
Number of extensions: 401730
Number of successful extensions: 3127
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 855
Number of HSP's gapped (non-prelim): 1127
length of query: 311
length of database: 14,973,337
effective HSP length: 99
effective length of query: 212
effective length of database: 8,778,115
effective search space: 1860960380
effective search space used: 1860960380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)