BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021491
(311 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/286 (89%), Positives = 269/286 (94%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW A LDEYEKLVIRM TPRVVIDN VCPTAT+VKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWSAYLDEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD+NGNKLTDESVI+YIEQSL TIHYGR++ FNGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDINGNKLTDESVINYIEQSLGTIHYGRTHDFNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ IDRIEAR
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+LR S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILRFSADSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDR KLLFDVVCTLTDMEYVVFHATINTAG++AYL
Sbjct: 241 ERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYL 286
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 8/176 (4%)
Query: 12 EYE-KLVIRM--NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
+YE K ++R ++P V + N V ++V V R +L + V LTD+ ++ A I
Sbjct: 218 DYERKPILRFSADSPVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATI 277
Query: 69 SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
++ G F++ +G ++ E + Q L+ R++ LEL DR G
Sbjct: 278 NTAGDKAYLEFYIKHTDGTPISSEPERQRVIQCLQAAVERRASEG---VRLELCTPDRQG 334
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
LL++V + +V A++ T ++ YV D G+P DS+ I+ + R+
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTSTKTATNVFYVTDA-IGNP-ADSKIIESVRQRI 388
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/286 (87%), Positives = 268/286 (93%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW ACLDEYEKLVIRM TPRVVIDNAVCP AT+VKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWSACLDEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTD+SVI+YIEQSL TIHYGR NGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKTGSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC+VV+AKVWTHNGRIA+L++VKDCNSGSPIED+QQIDRIEAR
Sbjct: 121 TDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK VSMAVTHTERRLHQMMFADRDYER P+L+ S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQMMFADRDYERNPILQPSGDSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQC+DRTKLLFDVVCTLTDMEY+VFHATI T+G+RAYL
Sbjct: 241 ERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYL 286
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG-RFFMDVF 79
++P V + N V ++V V R +L + V LTD+ ++ A I + G R +++ F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLE-F 288
Query: 80 HVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
++ +G ++ E + Q L+ R + LEL DR LL++V +
Sbjct: 289 YIRHTDGTPISSEPERQRVIQCLQAAVERRVSEG---VRLELCTLDRQCLLADVTRTFRE 345
Query: 140 LQCSVVEAKVWTHNGRIASLIYVKDC--NSGSP--IEDSQQ 176
+V A++ T ++ YV D N+ P IE +Q
Sbjct: 346 NGLNVTRAEISTTRDMALNVFYVTDAIGNAADPKLIESVRQ 386
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/286 (86%), Positives = 270/286 (94%), Gaps = 1/286 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP CLDEYEKLVIRMNTPRVV+DNAVC T TLVKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 5 MEWP-CLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSI 63
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL IH+ RSNSFNGLTALELTG
Sbjct: 64 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTG 123
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADL+C+VVE+K+WTHNGRIASLIYVKDC+SG+PIEDSQ+IDRIE R
Sbjct: 124 TDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGR 183
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VS+AVTHTERRLHQMMFADRDYER P++R +++ P VTVQNW
Sbjct: 184 LRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNWV 243
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDR KLLFDVVCTLTDM+YVVFHATINTAG++AYL
Sbjct: 244 ERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYL 289
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+P V + N V ++V V R +L + V LTD+ ++ A I++ G F++
Sbjct: 234 SPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYI 293
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G+ ++ E+ + Q L+ R++ LEL DR GLL++V +
Sbjct: 294 RHTDGSPISSEAERQRVIQCLQAAIERRASEG---VRLELCTEDRRGLLADVTRTFRENG 350
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+V A++ T + ++ YV D G+P
Sbjct: 351 LNVTRAEISTTSEIALNVFYVTDA-MGNP 378
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/286 (86%), Positives = 270/286 (94%), Gaps = 1/286 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP CLDEYEKLVIRMNTPRVV+DNAVC T TLVKVDSAR+HGILLEAVQVLTDLNL I
Sbjct: 1 MEWP-CLDEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSI 59
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL IH+ RSNSFNGLTALELTG
Sbjct: 60 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTG 119
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADL+C+VVE+K+WTHNGRIASLIYVKDC+SG+PIEDSQ+IDRIE R
Sbjct: 120 TDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGR 179
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VS+AVTHTERRLHQMMFADRDYER P++R +++ P VTVQNW
Sbjct: 180 LRNVLKGDNDIRSAKTSVSLAVTHTERRLHQMMFADRDYEREPIIRSASESPAVTVQNWV 239
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDR KLLFDVVCTLTDM+YVVFHATINTAG++AYL
Sbjct: 240 ERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYL 285
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+P V + N V ++V V R +L + V LTD+ ++ A I++ G F++
Sbjct: 230 SPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYI 289
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G+ ++ E+ + Q L+ R++ LEL DR GLL++V +
Sbjct: 290 RHTDGSPISSEAERQRVIQCLQAAIERRASEG---VRLELCTEDRRGLLADVTRTFRENG 346
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+V A++ T + ++ YV D G+P
Sbjct: 347 LNVTRAEISTTSEIALNVFYVTDA-MGNP 374
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/286 (86%), Positives = 264/286 (92%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW AC DEYEKLVIRM TPRVVIDNAV AT+VKVDSAR+H ILLEAVQVLTDLNL I
Sbjct: 1 MEWSACSDEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTDLNGNKLTDESVI+YIEQSL TIH G++ NGLTALELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGTIHPGKTTGSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSEVFAVLADLQCSVV+AKVWTHNGRIASL+YVKDCNSGSPIED+Q IDRIEAR
Sbjct: 121 TDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK VSMAVTHTERRLHQ+MFADRDYER P+L+ S D PVVTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKTMVSMAVTHTERRLHQVMFADRDYERKPILQPSGDSPVVTVQNWV 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDRTKLLFDVVCTLTDMEY+VFHATINTAG+RAYL
Sbjct: 241 ERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYL 286
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG-RFFMDVF 79
++P V + N V ++V V R +L + V LTD+ ++ A I++ G R +++ F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLE-F 288
Query: 80 HVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
++ +G ++ E + Q L+ R++ LEL DR GLL++V +
Sbjct: 289 YIRHTDGTPISSEPERQRVIQCLQAAVERRASEG---VRLELCTPDRQGLLADVTRTFRE 345
Query: 140 LQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+V A++ T ++ YV D G+P D + I+ + ++
Sbjct: 346 NGLNVTRAEISTAGDMALNVFYVTDA-VGNP-ADPKLIESVRQKI 388
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/286 (82%), Positives = 262/286 (91%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPA DEYEKL+IRM+TPRVVIDN+VC +ATLVKVDSARRHGILL+AVQVLTDLNL I
Sbjct: 1 MEWPASTDEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYIS+DG++FMDVFHVTD NGNK+ DESV+ YIEQSL IHYGR+N NGLTALELTG
Sbjct: 61 KKAYISADGKWFMDVFHVTDQNGNKIMDESVLKYIEQSLGNIHYGRTNRSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DRVGLLSEVFAVLADLQC V +AKVWTHNGRIASLIYVKDC+SGS IEDSQ+I++IE R
Sbjct: 121 SDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIELR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAKM+VSMAV HTERRLHQ+MF DRDYER P+L+ ++D P+VTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKMSVSMAVMHTERRLHQLMFVDRDYERTPILKLTSDNPLVTVQNWE 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
R YSVVNVQCKDRTKLLFD+VC LTDMEYVVFHATINT+G+RAYL
Sbjct: 241 GRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYL 286
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 12 EYEK---LVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
+YE+ L + + P V + N ++V V R +L + V LTD+ ++ A I
Sbjct: 218 DYERTPILKLTSDNPLVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATI 277
Query: 69 SSDG-RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRV 127
++ G R +++ F++ +G ++ E + Q L+ R++ LEL DR
Sbjct: 278 NTSGDRAYLE-FYIRHKDGTPISSEPERQRVIQCLKAAVERRASEG---VRLELCTEDRQ 333
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
GLL+EV + +V A++ T ++ YV D G P DS+ I+ + ++
Sbjct: 334 GLLAEVMRTFRENGLNVTRAEISTIGNMATNIFYVTDA-IGIP-ADSKIIESVRQKI 388
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/286 (81%), Positives = 257/286 (89%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKL+IRMNTPRVVIDN+V +ATLVKVDSARRHGILL+AV+VL DLNL I
Sbjct: 1 MEWPACTDEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYIS+DG++FMDVFHVTD NGNK+ DESV+ YIEQSL IHYGR+N NGLTALELTG
Sbjct: 61 KKAYISADGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVE+KVWTHNGRIASLIYVKD +SGS IEDSQ+I++IE R
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIELR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK++ SMAV HTERRLHQ+MF DRDYER P+L+ ++D VTVQNW
Sbjct: 181 LRNVLKGDNDIRSAKISFSMAVMHTERRLHQLMFVDRDYERAPILKLTSDNASVTVQNWE 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
R YSVVNVQCKDRTKLLFD+VC LTDMEYVVFHATINT G+RAYL
Sbjct: 241 GRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYL 286
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
Query: 12 EYEK---LVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
+YE+ L + + V + N ++V V R +L + V LTD+ ++ A I
Sbjct: 218 DYERAPILKLTSDNASVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATI 277
Query: 69 SSDG-RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRV 127
++DG R +++ F++ +G ++ E + Q L+ R++ LEL DR
Sbjct: 278 NTDGDRAYLE-FYIRHKDGTPISSEPERQRVIQCLKAAVERRASEG---VRLELCTEDRQ 333
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
GLL+EV + +V A++ T ++ YV D G+P DS+ I+ + ++
Sbjct: 334 GLLAEVVRTFRENGLNVTRAEISTIGNMAKNIFYVTDA-IGNP-ADSKIIESVRQKI 388
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/288 (83%), Positives = 255/288 (88%), Gaps = 2/288 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP+ LDEYEKLVIRMNTPRVVIDN C TATLVKVDSARR G LLEAVQVLTDLNL I
Sbjct: 1 MEWPSRLDEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT-ALELT 122
KKAY+SSDGR+FMDVFHVTD NG KLTDESVISY+EQSL T HY R+ FNG T ALELT
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTTTALELT 120
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIED Q+ID I A
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTVQN 241
RLR+VLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+L+ + D P VTVQN
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
A+R YSVV VQCKDRTKLLFDV+ TLTDM+YVVFHA INTA ERAYL
Sbjct: 241 CAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYL 288
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVF 79
N+P V + N ++V V R +L + + LTD+ ++ A I ++ R +++ F
Sbjct: 232 NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLE-F 290
Query: 80 HVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
++ +G ++ E+ + Q L+ R++ LEL DR GLL++V +
Sbjct: 291 YIRHSDGTPISSEAERQRVIQCLQAAIQRRASEG---VRLELCTEDRPGLLADVMRTFRE 347
Query: 140 LQCSVVEAKVWTHNGRIAS-------LIYVKDCNSGSPIEDSQQIDRIEARL 184
+V A++ T I++ + YV D + D + I+ + R+
Sbjct: 348 NGLNVTRAEISTTRAEISTTRDMALNVFYVTDVVGN--VADQKTIESVRQRI 397
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/288 (83%), Positives = 255/288 (88%), Gaps = 2/288 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWP+ LDEYEKLVIRMNTPRVVIDN C TATLVKVDSARR G LLEAVQVLTDLNL I
Sbjct: 1 MEWPSRLDEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT-ALELT 122
KKAY+SSDGR+FMDVFHVTD NG KLTDESVISY+EQSL T HY R+ FNG T ALELT
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGTTHYRRNEEFNGTTTALELT 120
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDCNSGSPIED Q+ID I A
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTVQN 241
RLR+VLKGDNDIRSAK +VSMAVTHTERRLHQMMFADRDYER P+L+ + D P VTVQN
Sbjct: 181 RLRSVLKGDNDIRSAKTSVSMAVTHTERRLHQMMFADRDYERKPILKLNADNSPAVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
A+R YSVV VQCKDRTKLLFDV+ TLTDM+YVVFHA INTA ERAYL
Sbjct: 241 CAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYL 288
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/289 (79%), Positives = 253/289 (87%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M ++EWP LDEY KL+ RMNTPRVVIDNAVC TATLVKVDSARRHGILLEAVQVLTDLN
Sbjct: 5 MVEIEWPGSLDEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLN 64
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
L I+KAYISSDG +FMDVFHVTDL GNKLTDE VISY+EQSL TIH G+ + N LTALE
Sbjct: 65 LSIQKAYISSDGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPATSNDLTALE 124
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTGTDRVGLLSEVFAVLA+LQC VVEAKVWTHNGRIASLIYVKDCNSGSPI++S++ID I
Sbjct: 125 LTGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTI 184
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RLRNVLKGD+DI AK +VSM VTHTERRLHQMMFADRDYER PV +H+ D PVVTVQ
Sbjct: 185 VGRLRNVLKGDDDILYAKTSVSMTVTHTERRLHQMMFADRDYERKPVQQHTEDSPVVTVQ 244
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
N +R YSVVN+QCKDR KLLFDV+CT+TDM+YVVFH TI T+ RAYL
Sbjct: 245 NLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYL 293
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 12 EYEKLVIRMNT---PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
+YE+ ++ +T P V + N V ++V + R +L + + +TD++ ++ I
Sbjct: 225 DYERKPVQQHTEDSPVVTVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTI 284
Query: 69 -SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRV 127
+S R +++ F++ +G ++ E+ + Q L+ R++ LEL TDR
Sbjct: 285 TTSRHRAYLE-FYIRHTDGTPISSEAERQRVIQCLQASIERRTSRG---VRLELCTTDRP 340
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
LL++V + +V A+V T +L YV D + + D++ ID + ++
Sbjct: 341 CLLADVTRTFRENGLNVTRAEVSTSQEVALNLFYVTDGHGSAA--DTKMIDSVREKI 395
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/286 (79%), Positives = 256/286 (89%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKLVIRM+TPRVVIDNAVC TAT+VKVDSAR+HGIL++AVQVL+DLNL I
Sbjct: 1 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD NGNKLTDESV+SYIEQSL +IH G+++ NGLT LELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGLTILELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+ QC VV+AKVWTHNGRIASLIYVKD NS +PIEDSQ+I IEAR
Sbjct: 121 TDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIR+AK +V+ AV H ERRLHQMM+ DRDY+R P+ + S+D P+VTVQNWA
Sbjct: 181 LRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPIFKFSSDTPIVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDR KLLFDVVC LT+MEYVVFHATI T ++AYL
Sbjct: 241 ERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYL 286
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/286 (78%), Positives = 253/286 (88%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKL+IRM+TPRVVIDNAVC TATLVKV SARR+G LL A+QVL DLNLLI
Sbjct: 1 MEWPACTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++FMDVFHVT NG+K+ DE+++ YIEQSL + H R+N NGLT LEL+G
Sbjct: 61 KKAYISSDGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVLELSG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLADLQC VVEAKVWTHNGRIASLIYVKDC+SGS IEDSQ+I +IE R
Sbjct: 121 TDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEVR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIRSAK +VSM+V H+ERRLHQMMFADRDYER P+L+ ++D +VTVQNWA
Sbjct: 181 LRNVLKGDNDIRSAKTSVSMSVMHSERRLHQMMFADRDYERTPILKLTSDNTLVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVN+QCKDR KLLFDVVC LTDMEYVVFHATINT +AYL
Sbjct: 241 ERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYL 286
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/286 (78%), Positives = 255/286 (89%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEWPAC DEYEKLVIRM+TPRVVIDNAVC TAT+VKVDSAR+HGIL++AVQVL+DLNL I
Sbjct: 1 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+FMDVFHVTD NG+KLTD+SV+SYIEQSL +IH ++N NGLT LELTG
Sbjct: 61 KKAYISSDGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGLTILELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+ QC VV+AKVWTHNGRIASLIYVKD NSG+ IEDSQ+I IEAR
Sbjct: 121 TDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LRNVLKGDNDIR+AK +V+ AV H ERRLHQMM+ DRDY+R P+L+ ++ P+VTVQNWA
Sbjct: 181 LRNVLKGDNDIRNAKTSVTNAVLHAERRLHQMMYTDRDYQRNPILKFASVTPIVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVN+QCKDR KLLFDVVC LTDMEYVVFHATI T ++AYL
Sbjct: 241 ERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYL 286
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + N ++V + R +L + V LTD+ ++ A I + F++
Sbjct: 231 TPIVTVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYI 290
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G ++ E + Q L+ R+ + G+ LEL DR GLL+EV +
Sbjct: 291 RHRDGTPISSEPERHRVIQCLQAAVERRA--YEGVR-LELCTEDRQGLLAEVMRTFRENG 347
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A++ T +++ YV D G P++
Sbjct: 348 MNVTRAEISTIGNMASNVFYVTDA-VGYPVD 377
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/286 (76%), Positives = 251/286 (87%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW AC DEYEKLV RM+TPRVVIDNAVC +T+VK DSAR+HGILLEAVQ+L+DLNL I
Sbjct: 1 MEWSACTDEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAY+SSDGR+FMDVFHVTD NGNKLTDESV+ YIEQSL +I+ G++N NGLTALEL G
Sbjct: 61 KKAYVSSDGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGLTALELKG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDRVGLLSEVFAVLA+LQC VVEAKVWTHNGR ASLIYVKD +G+ IEDSQ+I+R+EAR
Sbjct: 121 TDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEAR 180
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LR VL+GD+DIRSA ++S AV H ERRLHQMMFADRDY+ P+ + S++ PVVTVQNWA
Sbjct: 181 LRYVLQGDSDIRSATTSISDAVIHPERRLHQMMFADRDYQMNPIFKFSSETPVVTVQNWA 240
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+R YSVVNVQCKDR KLLFDVVC LTDMEYVVFHATINT ++AY+
Sbjct: 241 ERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYM 286
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/288 (71%), Positives = 246/288 (85%), Gaps = 2/288 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
M LDEYEKLVIRMNTPRVVIDN VC +AT+VKVDS+RR+GILLEAVQ+LTDLNL I
Sbjct: 1 MAMKGYLDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDGR+ MDVFHVTDLNGNKL D+SV+ YIEQS+ET++YG + NGLTALELTG
Sbjct: 61 KKAYISSDGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSE+FAVL+DL C VV+AK+WTHNGR+AS+IY++D +SG+PI DSQ+I +IE R
Sbjct: 121 TDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEGR 180
Query: 184 LRNVLKGDNDIRSAKMT-VSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L+NVL GDND+ SA T VS+ ++ H ERRLHQ+MF DRDYER + ++ VVTVQN
Sbjct: 181 LKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYERRSNKQETSPTVVVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
WA+R YSVVNV C+DRTKLLFDVVCTLTDMEY VFHATINTA ++A+L
Sbjct: 241 WAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHL 288
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/288 (71%), Positives = 239/288 (82%), Gaps = 2/288 (0%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
M LDEYEKLVIRMNTPRVVIDN VC +AT+VKVDS+RR+GILLEAVQ+LTDLNL I
Sbjct: 1 MAMKGYLDEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG + MDVFHVTDLNGNKL D+SV+ YIEQS+ET++YG + NGLTALELTG
Sbjct: 61 KKAYISSDGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR+GLLSE+FAVL+DL C VV+AK+WTHNGR+AS+IY+KDC SG+PI DS +I +IE R
Sbjct: 121 TDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEGR 180
Query: 184 LRNVLKGDNDIRSAKMTVSM--AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L+NVL GDND+ SA T ++ H ERRLHQ+MF DRDYER + VVTVQN
Sbjct: 181 LKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSKKHERSPMVVVTVQN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
WA+R YSVVNV C+DRTKLLFDVVCTLTDMEY VFHATINTA ++A+L
Sbjct: 241 WAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHL 288
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V + N ++V V R +L + V LTD+ + A I++ F++
Sbjct: 236 VTVQNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHK 295
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ ++ E+ + Q LE R+ G+ LEL D+ GLL+EV + +V
Sbjct: 296 DGSPISSEAERQRVIQCLEAAVERRA--LEGVR-LELRHPDKQGLLAEVTRTFRENGLNV 352
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSP 170
++ T + ++ YV D N P
Sbjct: 353 TRTEISTSSDMATNIFYVTDANGDEP 378
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 233/289 (80%), Gaps = 6/289 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNGNKLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGDNDIRSAKMT-VSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+LRN+LK D+ ++ T VS TH ERRLHQ MF DRDYE+ + S P+V+VQ
Sbjct: 181 QLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIVSVQ 237
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
N R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+L
Sbjct: 238 NLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFL 286
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YEK +P V + N ++V + R +L + V LTD+ ++ A I +
Sbjct: 221 DYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTV 280
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G F+V +G+ ++ E + Q L+ R+ G+ LEL DR GLL+
Sbjct: 281 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRT--VKGVR-LELCTADRPGLLA 337
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
EV VL + ++ A++ T +G ++ YV D N
Sbjct: 338 EVTRVLRENGLNIARAEISTKDGVARNVFYVTDANG 373
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 SARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQS 101
+A R G+L E +VL + L I +A IS+ +VF+VTD NGN L D +I I +
Sbjct: 329 TADRPGLLAEVTRVLRENGLNIARAEISTKDGVARNVFYVTDANGN-LIDPEIIQSIREK 387
Query: 102 L 102
+
Sbjct: 388 I 388
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/289 (67%), Positives = 233/289 (80%), Gaps = 6/289 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGDNDIRSAKMT-VSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+LRN+LK D+ ++ T VS TH ERRLHQ MF DRDYE+ + S P+V+VQ
Sbjct: 181 QLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIVSVQ 237
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
N R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+L
Sbjct: 238 NLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFL 286
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YEK +P V + N ++V + R +L + V LTD+ ++ A I +
Sbjct: 221 DYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTV 280
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G F+V +G+ ++ E + Q L+ R+ G+ LEL DR GLL+
Sbjct: 281 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRT--VKGVR-LELCTADRPGLLA 337
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
EV +L + ++ A++ T + ++ YV D N
Sbjct: 338 EVTRILRENGLNIARAEISTKDSIARNVFYVTDANG 373
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 SARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQS 101
+A R G+L E ++L + L I +A IS+ +VF+VTD NGN L D +I I +
Sbjct: 329 TADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTDANGN-LIDPEIIKSIREK 387
Query: 102 L 102
+
Sbjct: 388 I 388
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/289 (67%), Positives = 233/289 (80%), Gaps = 6/289 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
ME C +EYEKLV+RMN PRVVIDN VCP +T+VK+DSAR GILLE+VQ+LTD+NL I
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWI 60
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTG 123
KKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ + GLTALELTG
Sbjct: 61 KKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYTGLTALELTG 120
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DSQQIDRIEA 182
TDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ DS ++ R+E
Sbjct: 121 TDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEG 180
Query: 183 RLRNVLKGDNDIRSAKMT-VSMAV-THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
+LRN+LK D+ ++ T VS TH ERRLHQ MF DRDYE+ + S P+V+VQ
Sbjct: 181 QLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS---PIVSVQ 237
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
N R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+L
Sbjct: 238 NLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFL 286
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YEK +P V + N ++V + R +L + V LTD+ ++ A I +
Sbjct: 221 DYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTV 280
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G F+V +G+ ++ E + Q L+ R+ G+ LEL DR GLL+
Sbjct: 281 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRT--VKGVR-LELCTADRPGLLA 337
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
EV +L + ++ A++ T + ++ YV D N
Sbjct: 338 EVTRILRENGLNIARAEISTKDSIARNVFYVTDANG 373
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 SARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQS 101
+A R G+L E ++L + L I +A IS+ +VF+VTD NGN L D +I I +
Sbjct: 329 TADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTDANGN-LIDPEIIKSIREK 387
Query: 102 L 102
+
Sbjct: 388 I 388
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/298 (65%), Positives = 233/298 (78%), Gaps = 15/298 (5%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKV---------DSARRHGILLEAVQ 54
ME C +EYEKLV+RMN PRVVIDN VCP +T+VKV DSAR GILLE+VQ
Sbjct: 1 MELSDCSNEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQ 60
Query: 55 VLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN 114
+LTD+NL IKKAYISSDG++ MDVFHV+DLNG+KLTDE++I YIE+S+ET HY ++ +
Sbjct: 61 LLTDMNLWIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIETSHYCKTEGYT 120
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-D 173
GLTALELTGTDRVGLLSEVFAVLADL+C VVEAK WTHNGRIAS+IYVKD NSG+PI+ D
Sbjct: 121 GLTALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGD 180
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMT-VSMAV-THTERRLHQMMFADRDYERMPVLRHS 231
S ++ R+E +LRN+LK D+ ++ T VS TH ERRLHQ MF DRDYE+ + S
Sbjct: 181 SDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS 240
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
P+V+VQN R YSVVN+QCKDR KLLFDVVCTLTDM Y+VFHA I T GE A+L
Sbjct: 241 ---PIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFL 295
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YEK +P V + N ++V + R +L + V LTD+ ++ A I +
Sbjct: 230 DYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTV 289
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G F+V +G+ ++ E + Q L+ R+ G+ LEL DR GLL+
Sbjct: 290 GETAFLEFYVRHSDGHPVSSEPERQRLIQCLQAAIERRT--VKGVR-LELCTADRPGLLA 346
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
EV +L + ++ A++ T + ++ YV D N
Sbjct: 347 EVTRILRENGLNIARAEISTKDSIARNVFYVTDANG 382
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 SARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQS 101
+A R G+L E ++L + L I +A IS+ +VF+VTD NGN L D +I I +
Sbjct: 338 TADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTDANGN-LIDPEIIKSIREK 396
Query: 102 L 102
+
Sbjct: 397 I 397
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/287 (63%), Positives = 222/287 (77%), Gaps = 18/287 (6%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN+PRVVIDNAVC ATLVKVDSA +HGILLEAVQVLTDL L I KA +SSDGR+FMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 80 HVTDLNGNKLTDESVISYIEQSLET-----IHYGRSNSF----NGLTALELTGTDRVGLL 130
+VTD NG KLTDE VI YIE++LET +G+S + TA+ELTGTDR GLL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SE+FAVL+DL+C+VVEA+VWTHN R+A L+YV D +G+PI+D Q+I +IE LRNV++G
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM---------PVLRHSTDYPVVTVQN 241
+++IR AK SM +THTERRLHQ+MFADRDYE++ P+ + P VTV+N
Sbjct: 181 NSNIRGAKTVASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPHVTVEN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+R YSVVNVQCKDR KLLFDVVCTLTDMEYVVFHATI++ G + +
Sbjct: 241 CLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTH 287
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N + ++V V R +L + V LTD+ ++ A I S G +++
Sbjct: 234 PHVTVENCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIR 293
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G + E+ + Q LE R++ LEL DRVGLLS+V + +
Sbjct: 294 HTDGCPVNSEAERQRVIQCLEAAIRRRASEG---VRLELCTNDRVGLLSDVTRIFRENGM 350
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D +G+P++
Sbjct: 351 SVTRAEVSTRGDKAVNVFYVTDA-AGNPVD 379
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 223/289 (77%), Gaps = 12/289 (4%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD ER ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAH 281
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + + ++V V R +L + V LTD++ ++ I + G F++
Sbjct: 227 TPAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYI 286
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G+ ++ E+ + Q L+ R S G+ LEL DR LLS+V +
Sbjct: 287 RHADGSPISSEAERHRVSQCLQDAIERR--SLEGVR-LELCTPDRPALLSDVTRTFRENG 343
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
V +A+V T +++ YV D +G +E S ID + R+
Sbjct: 344 LLVAQAEVSTKGDMASNVFYVTDA-AGHAVEQS-AIDAVRQRV 384
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 223/289 (77%), Gaps = 12/289 (4%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD ER ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAH 281
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + + ++V V R +L + V LTD++ ++ I + G F++
Sbjct: 227 TPAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYI 286
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G+ ++ E+ + Q L+ R S G+ LEL DR LLS+V +
Sbjct: 287 RHADGSPISSEAERHRVSQCLQYAIERR--SLEGVR-LELCTPDRPALLSDVTRTFRENG 343
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
V +A+V T +++ YV D +G +E S ID + R+
Sbjct: 344 LLVAQAEVSTKGDMASNVFYVTDA-AGHAVEQS-AIDAVRQRV 384
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/289 (62%), Positives = 223/289 (77%), Gaps = 12/289 (4%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVC TATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YIEQSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GL+SEVFAVLAD+ C+VVEA+ WTH GR+ L++++D + D++++ RIEA
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 RLRNVLKGDN--DIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYPVVTV 239
RL ++L+GD+ + + AV H ERRLHQ+M ADRD ER ++ P V+V
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQEERAAAAAAASPTPAVSV 232
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
Q+WA+R YSVV VQC+DR KLLFDVVCTLTDM+YVVFH TI+T G++A+
Sbjct: 233 QSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAH 281
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + + ++V V R +L + V LTD++ ++ I + G F++
Sbjct: 227 TPAVSVQSWAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYI 286
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G+ ++ E+ + Q L+ R S G+ LEL DR LLS+V +
Sbjct: 287 RHADGSPISSEAERHRVSQCLQDAIERR--SLEGVR-LELCTPDRPALLSDVTRTFRENG 343
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
V +A+V T +++ YV D +G +E S ID + R+
Sbjct: 344 LLVAQAEVSTKGDMASNVFYVTDA-AGHAVEQS-AIDAVRQRV 384
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 177/288 (61%), Positives = 218/288 (75%), Gaps = 9/288 (3%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMN PRVVIDNA+CPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK--DCNSGSPIEDSQQIDRI 180
G DR GLLSEVFAVLAD+QCSVV+A+ WTH GR+A +++++ + SG+ +D ++ RI
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 EARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
ARL ++L+GD + + + V H +R LHQ+M AD D R P P V+V
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLD--RAPSFPAPALSPAVSV 235
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
Q+WA+R YSVV V C+DR KLLFDVVCTL DM+YVVFH T++TAG+RA
Sbjct: 236 QSWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRA 283
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R +L + V L D++ ++ + + G F++ +G+ + E+ + Q L+
Sbjct: 253 RPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGSPIRSEAERERLNQCLQA 312
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
RS G+ LEL DR GLLSEV + VV+A+V T +++ YV D
Sbjct: 313 AIERRS--LEGVR-LELCTPDRPGLLSEVTRTFRENGLLVVQAEVSTKGDLASNVFYVTD 369
Query: 165 CNSGSPIEDSQQIDRIEARL 184
+ D ID + R+
Sbjct: 370 --AAGKAADQSAIDAVRERV 387
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 212/298 (71%), Gaps = 19/298 (6%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W L DE+EKLVIRMN PRV +DNA TATL+KVDSA R G LLE VQVL D++L+
Sbjct: 4 WSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
I++AYISSDG +FMDVFHVTD GNKL+++ V I+QSL R+ SF L
Sbjct: 64 IRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGP----RARSFRSLRRSVGV 119
Query: 117 ------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
T +ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G P
Sbjct: 120 QAANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLP 179
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
I+D ++ +I+ L VLKGD D RSA VS+ T+T+RRLHQMM+ADRDY+ +
Sbjct: 180 IDDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDMDSGSTN 239
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P+VTV+N+AD+ Y+VVN++C DR KLLFD VCTLTDM+YVVFHAT+ G AY
Sbjct: 240 DRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAY 297
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V + R +L + V LTD+ ++ A + ++G +++
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + LE R++ G+ LEL DRVGLLS+V + +
Sbjct: 304 HVDGCPISSEAEQQRVILCLEAAIRRRTS--EGIR-LELCSEDRVGLLSDVTRIFRENGL 360
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + + YV D +SG+P++
Sbjct: 361 SVTRAEVTTRGSQAVNAFYVTD-SSGNPVK 389
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 212/298 (71%), Gaps = 19/298 (6%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W L DE+EKLVIRMN PRV +DNA TATL+KVDSA R G LLE VQVL D++L+
Sbjct: 4 WSPSLTVDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
I++AYISSDG +FMDVFHVTD GNKL+++ V I+QSL R+ SF L
Sbjct: 64 IRRAYISSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGP----RARSFRSLRRSVGV 119
Query: 117 ------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
T +ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G P
Sbjct: 120 QAANEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLP 179
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
I+D ++ +I+ L VLKGD D RSA VS+ T+T+RRLHQMM+ADRDY+ +
Sbjct: 180 IDDPDRLVKIKQLLLYVLKGDRDKRSANTAVSVGSTNTQRRLHQMMYADRDYDMDSGSTN 239
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P+VTV+N+AD+ Y+VVN++C DR KLLFD VCTLTDM+YVVFHAT+ G AY
Sbjct: 240 DRSKPLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAY 297
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V + R +L + V LTD+ ++ A + ++G +++
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + LE R++ G+ LEL DRVGLLS+V + +
Sbjct: 304 HVDGCPISSEAEQQRVILCLEAAIRRRTS--EGIR-LELCSEDRVGLLSDVTRIFRENGL 360
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + + YV D +SG+P++
Sbjct: 361 SVTRAEVTTRGSQAVNAFYVTD-SSGNPVK 389
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 214/289 (74%), Gaps = 21/289 (7%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLV+RMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL T + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSEVFAVLADLQC VV+A+ WTH GR+A + +++ D+ ++ RI A
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILA 171
Query: 183 RLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP--VVTV 239
RL ++++GD + + + AV H +RRLHQ+M AD + P YP V+V
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHNNSATP-------YPAAAVSV 224
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERA 287
Q+WA+R YSVV VQC+DR KLLFDVVC L ++YVVFH T++T AG+RA
Sbjct: 225 QSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRA 273
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 210/293 (71%), Gaps = 19/293 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA ATL+KVDSA + G LLE VQVLTDL+LLI++AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD +GNKL+++ V I+QSL R+ SF L T
Sbjct: 72 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGP----RACSFRSLRRSVGVQTASENTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +GSPI + ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLT 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YP 235
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY+ ST P
Sbjct: 188 KIKQLLLYVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDIDDGEGGSTSERRKP 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+VTV+N AD+ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI G AY
Sbjct: 248 LVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAY 300
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V + R +L + V LTD+ ++ A I ++G +++
Sbjct: 247 PLVTVENCADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIR 306
Query: 83 DLNGNKLTDES----VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
++G+ ++ E+ VI+ +E ++ R + G+ LEL DR+GLLSEV +
Sbjct: 307 HMDGSPISSEAERQRVINCLEAAI------RRRNPEGIR-LELCSEDRIGLLSEVTRIFR 359
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+ SV A+V T + + + YV D SG P++
Sbjct: 360 ENGLSVTRAEVTTRDSQAVNAFYVTDA-SGYPVK 392
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 204/290 (70%), Gaps = 15/290 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET----IHYGRSNSFNGLT---ALELTG 123
DG +FMDVF+VT +GNK+TDE+++ YI +SL RS T A+EL G
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTTDHIAIELMG 133
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TDR GLLSEV AVL +L+C++V A+VWTHN R A++++V D SGS I D Q++ I+
Sbjct: 134 TDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSIIKEL 193
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THTERRLHQMMFADRDYER + D+ P V
Sbjct: 194 LCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFDEKQRPNVN 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW+D+ YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY
Sbjct: 251 VVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAY 300
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTD+ ++ A I ++G +++
Sbjct: 247 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 306
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q L R + GL LEL TDRVGLLS+V + +
Sbjct: 307 HIDGSPVKSDAERQRVIQCLAAAIQRRVSE--GL-KLELCTTDRVGLLSDVTRIFRENSL 363
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKM 199
+V A+V T G+ + YV+ SG P+ DS+ I+ I + N + KG S +
Sbjct: 364 TVTRAEVATKGGKAVNTFYVRGA-SGFPV-DSKTIESIRQTIGNTILKVKG-----SPEE 416
Query: 200 TVSMAVTHTERRLHQMMFADRDY 222
S+ R L +F R +
Sbjct: 417 MKSVPQDSPTRSLFSGLFKSRSF 439
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/283 (57%), Positives = 205/283 (72%), Gaps = 12/283 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLL 130
DG +FMDVF+VT +GNK+TDE+++ YI + + +G++ TA+EL GTDR GLL
Sbjct: 69 DGGWFMDVFNVTGQDGNKVTDEAILDYIRK-VGVSPFGQTMDH---TAIELMGTDRPGLL 124
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SEV AVL +L+C+++ A+VWTHN R A++++V D +GS I D Q++ I+ L NVL G
Sbjct: 125 SEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKELLCNVLGG 184
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADR 245
N R AK V+ THTERRLHQMMFADRDYER + D+ P V V NW+D+
Sbjct: 185 GNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFAEKQRPNVNVVNWSDK 241
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY
Sbjct: 242 DYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAY 284
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTD+ ++ A I ++G +++
Sbjct: 231 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 290
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q L R + GL LEL TDRVGLLS+V + +
Sbjct: 291 HIDGSPVKSDAERQRVIQCLAAAIERRVSE--GL-KLELCTTDRVGLLSDVTRIFRENSL 347
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKM 199
+V A+V T G+ + YV+ SG P+ DS+ I+ I + N + KG S +
Sbjct: 348 TVTRAEVATKGGKAVNTFYVRGA-SGFPV-DSKTIESIRQTIGNTILKVKG-----SPEE 400
Query: 200 TVSMAVTHTERRLHQMMFADRDY 222
S+ R L +F R +
Sbjct: 401 MKSVPQDSPTRSLFSGLFKSRSF 423
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/287 (59%), Positives = 206/287 (71%), Gaps = 10/287 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+V D +GNK+TDE+++ YI +SL + S G+ T++ELTG
Sbjct: 69 DGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMRSVGVIPSMDHTSIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSE+ AVL L+C+VV A+VWTHN R A+++ V D +GS I D +++ RI+
Sbjct: 129 SDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRIKEL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM--PVLRHSTDYPVVTVQN 241
L NVLKG N R AK VS VTHTERRLHQMMFADRDYER VL P V+V N
Sbjct: 189 LCNVLKGSNKFRGAKTVVSHGVTHTERRLHQMMFADRDYERADDEVL-DEKQRPNVSVVN 247
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
W D+ YSVV ++ KDR KLLFD VCTLTDMEYVVFHA I+ G AY
Sbjct: 248 WYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAY 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + S R +L + V LTD+ ++ A I ++G +++
Sbjct: 241 PNVSVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIR 300
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q LE R + GL LEL TDRVGLLS+V + +
Sbjct: 301 HIDGSPVKSDAERMRVIQCLEAAIERRVS--EGL-KLELCTTDRVGLLSDVTRIFRENSL 357
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNS----GSPIEDSQQI 177
+V A+V T +G+ + YV+D + G IE +Q+
Sbjct: 358 TVTRAEVTTRDGKAINTFYVRDASGYLVDGKTIESIRQV 396
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/288 (57%), Positives = 208/288 (72%), Gaps = 12/288 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HG LLE VQVLTDLNL+I KAY+SS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYVSS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--------IHYGRSNSFNGLTALELT 122
DG +FMDVF+VTD +GNK+TDE+++ YI +SL T +G S + TA+ELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSMGSFGVKQSIDH-TAIELT 127
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G+DR GLLSEV AVLA L+C+V+ A+VWTHN R A+++ V D +GS I D +++ R++
Sbjct: 128 GSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRVKE 187
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM--PVLRHSTDYPVVTVQ 240
L NVLKG N R A+ VS VTHTERRLHQMMFADRDYER VL P V+V
Sbjct: 188 LLCNVLKGSNKYRGARTVVSHGVTHTERRLHQMMFADRDYERANNDVL-DEKQRPNVSVV 246
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
NW ++ YSV+ ++ KDR KLLFD VCTLTDMEYVVFHA I+ G A+
Sbjct: 247 NWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAH 294
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N +++ + S R +L + V LTD+ ++ A I ++G +++
Sbjct: 241 PNVSVVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ I Q LE R + GL LEL DR+GLLS+V + +
Sbjct: 301 HVDGSPVKSEAERQRIIQCLEAAIERRVSE--GL-KLELCTKDRIGLLSDVTRIFRENSL 357
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI-EARLRNVLK 189
+V A+V T G+ + YV D SG P+ D++ ID I +A + +LK
Sbjct: 358 TVTRAEVTTRAGKAVNTFYVSDA-SGYPV-DAKTIDSIRQATGQTILK 403
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 203/291 (69%), Gaps = 18/291 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL R+N PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL+I KAYISS
Sbjct: 9 DEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVF+VTD +GNK+TDE+++ YI +SL G + F TA
Sbjct: 69 DGGWFMDVFNVTDPDGNKVTDEAILDYITKSL-----GPESCFTSSMRSVGVKQSMDHTA 123
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG+DR GLLSEV AVL L+C+VV A+VWTHN R A+++ V D +GS I D +++
Sbjct: 124 IELTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLS 183
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR-HSTDYPVV 237
RI+ L NVLKG N R AK VS VTHTERRLHQMMFADRDYER P V
Sbjct: 184 RIKELLCNVLKGSNKSRGAKTVVSHGVTHTERRLHQMMFADRDYERANNDELDEKQRPNV 243
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+V NW ++ YSVV + KDR KLLFD VCTLTDMEYVVFHA I+ G A+
Sbjct: 244 SVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAH 294
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + S R +L + V LTD+ ++ A I ++G +++
Sbjct: 241 PNVSVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ I Q LE R + GL LEL TDRVGLLS+V + +
Sbjct: 301 HIDGSPVKSEAERQRIIQCLEAAIERRVSE--GL-KLELCTTDRVGLLSDVTRIFRENSL 357
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI-EARLRNVLKGDNDIRSAKMTV 201
+V A+V T G+ + YV D SG P+ D++ ID I +A + +LK + K
Sbjct: 358 TVTRAEVTTRAGKAVNTFYVSDA-SGYPV-DAKTIDSIRQAIGQTILKVKSSPEEQKPVS 415
Query: 202 SMAVTHTERRLHQMMFADRDYERMPVLR 229
+ T R L +F R + ++R
Sbjct: 416 QESPT---RFLFGGLFKSRSFVNFGLVR 440
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 205/291 (70%), Gaps = 17/291 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN C AT+++VDSA +HGILLE VQ+LTDLNL+I KAYISS
Sbjct: 14 DEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL--------ETIHYGRSNSFNGLTALELT 122
DG +FMDVF+VT +GNK+TDE+++ YI +SL G + + TA+EL
Sbjct: 74 DGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTMDH-TAIELM 132
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVL +L+C+++ A+VWTHN R A++++V D +GS I D Q++ I+
Sbjct: 133 GTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKE 192
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVV 237
L NVL G N R AK V+ THTERRLHQMMFADRDYER + D+ P V
Sbjct: 193 LLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYER---VNDDDDFAEKQRPNV 249
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW+D+ YSVV +QCKDR KLLFD VCTLTDM+YVVFHA I+ G AY
Sbjct: 250 NVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAY 300
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTD+ ++ A I ++G +++
Sbjct: 247 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 306
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q L R + GL LEL TDRVGLLS+V + +
Sbjct: 307 HIDGSPVKSDAERQRVIQCLAAAIERRVSE--GL-KLELCTTDRVGLLSDVTRIFRENSL 363
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKM 199
+V A+V T G+ + YV+ SG P+ DS+ I+ I + N + KG S +
Sbjct: 364 TVTRAEVATKGGKAVNTFYVRGA-SGFPV-DSKTIESIRQTIGNTILKVKG-----SPEE 416
Query: 200 TVSMAVTHTERRLHQMMFADRDY 222
S+ R L +F R +
Sbjct: 417 MKSVPQDSPTRSLFSGLFKSRSF 439
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/302 (54%), Positives = 209/302 (69%), Gaps = 16/302 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ + WP ++E L R++ P V IDN C +LVKV+SA RHGILLE VQVLTDL+
Sbjct: 1 MESVCWPYFDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
L+I KAYISSDGR+FMDVFHVTD GNKLTD+ +I YI+Q+L G +
Sbjct: 61 LIISKAYISSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRT 120
Query: 111 ---NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
S TA+ELTGTDR GLLSE+ AVL +L+C+VV A+VWTHN R+A ++YV D ++
Sbjct: 121 VGVQSIGEHTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDEST 180
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
PIE+ +Q+ I+ +L NVLKG++D R K SM +THTERRLHQMMFADRDYE P
Sbjct: 181 SRPIEEPEQLAAIKEQLSNVLKGNDDRRGVKTDFSMGLTHTERRLHQMMFADRDYE-GPD 239
Query: 228 LRH--STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
R P++ ++N ++ YSVV V CKDR KLLFD VCTLTDM+YVV HATI ++G
Sbjct: 240 TRSLGENGRPIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGT 299
Query: 286 RA 287
A
Sbjct: 300 YA 301
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + I+N ++V V R +L + V LTD+ ++ A I+S G + + +++
Sbjct: 249 PIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYIR 308
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + LE R + LEL +DRVGLLS++ + +
Sbjct: 309 HMDGCTLDTEGEKQRVIKCLEAAIERRVSEG---VRLELCTSDRVGLLSDITRIFRENGL 365
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV D SG+P++
Sbjct: 366 SVTRADVTTRADKAVNVFYVTD-TSGNPVD 394
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/299 (55%), Positives = 203/299 (67%), Gaps = 19/299 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ + WP EYE L R+N P V IDN CP TL+KVDSA +HGILLE VQ+LTDL+
Sbjct: 1 MESVSWPYFDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----------YGR- 109
L I KAYISSDG +FMDVFHVTD G+KLTDES+I YI+QSL GR
Sbjct: 61 LTISKAYISSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRI 120
Query: 110 --SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
S TA+ELTGTDR GLLSE+ AVL C+VV A+ WTHN R+A ++YV D +S
Sbjct: 121 VGVQSIGEYTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESS 180
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYE--- 223
PIED ++ I+ +L NVLKG++D + K SM +TH ERRLHQ+MFADRDYE
Sbjct: 181 NRPIEDEVRLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSS 240
Query: 224 --RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
P L PV+TV+N ++ YSVVN+QC+DR KLLFD VCTLTDM+YVVFHA+I
Sbjct: 241 DSSNPSLLDENMKPVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASI 299
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D P+ LDE K P + ++N ++V + R +L + V LTD+ +
Sbjct: 241 DSSNPSLLDENMK-------PVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYV 293
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A I+ + + + +++ ++G L E + + LE GR S GL +LEL+
Sbjct: 294 VFHASITCNLPYALQEYYIRHMDGCTLDTEGEKHRVIKCLEAA-IGRRAS-EGL-SLELS 350
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+DR+GLLS+V + + SV A V T + ++ YV+D +SG+
Sbjct: 351 ASDRIGLLSDVTRMFRENGLSVTRADVTTRGDKAINVFYVRDASSGN 397
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 212/290 (73%), Gaps = 23/290 (7%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD+SVI+YI+QSL + R + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGXWNEPARPAALEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSEVFAVLADLQC VV+A+ WTH GR+A + +++ G D ++ RI A
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLR----GEGXAD--RVARILA 171
Query: 183 RLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP----VV 237
RL ++++GD + + + AV H +RRLH++M AD + P YP V
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAADHNNSATP-------YPAAAAAV 224
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGER 286
+VQ+WA+R YSVV VQC+DR KLLFDVVC L ++YVVFH T++T AG+R
Sbjct: 225 SVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDR 274
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDESV 94
++V V R +L + V L L+ ++ + ++ G F++ +G+ + E+
Sbjct: 235 SVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRSADGSPIRSEAE 294
Query: 95 ISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNG 154
+ Q L+ RS G+ LEL DR GLLSEV + V A+V T G
Sbjct: 295 RERLAQCLQAAIDRRS--LEGVR-LELCTPDRPGLLSEVTRTFRENGLLVAHAEVSTKGG 351
Query: 155 RIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+++ YV D + + + + ID + AR+
Sbjct: 352 LASNVFYVTDADGKAAGQSA--IDAVRARV 379
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 204/293 (69%), Gaps = 20/293 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+KLVIRMN PRV IDN ATL+KVDS+ RHG LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD NG KL D+ V I+QSL R+ SF L T
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGP----RARSFRSLRRSVGVQAAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL+G DR GLLSEVFAVL DL+C+VV A+VWTHN R+AS++Y+ D SG PI+D +
Sbjct: 127 IELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLA 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---P 235
+I+ L VLKGD D SA VSM TH ERRLHQMM+ADRD++ + S Y P
Sbjct: 187 KIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFD-LNYTSCSESYQSRP 245
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+VTV+N ++ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI AY
Sbjct: 246 LVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAY 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D+ + +C + Y+ + P V ++N V T+V + R +L + V LTD+ +
Sbjct: 231 DLNYTSCSESYQ------SRPLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYV 284
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A I ++ + + ++G+ ++ E+ + LE R + G+ LEL
Sbjct: 285 VYHATIIAEEPEAYQEYFIRHVDGSPISSEAERQRVIHCLEAAI--RRRTTEGI-KLELC 341
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
DRVGLL++V + + SV A+V T + ++ YV D + S
Sbjct: 342 SEDRVGLLTDVTRIFRENGLSVTRAEVTTRGTQAVNVFYVTDASGNS 388
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/287 (58%), Positives = 203/287 (70%), Gaps = 7/287 (2%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLI 63
MEW LDEYEKLVIRMNTPRVVIDNAVCPTATLV+VDSAR+ G+LLEAVQVL DL+L I
Sbjct: 1 MEW---LDEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSI 57
Query: 64 KKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELT 122
KAYISSDGR+FMDVFHVTD G KLTD SVI+YI+QSL T + + GLTALELT
Sbjct: 58 NKAYISSDGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAAAPPEGLTALELT 117
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G R GLLSEVFAVLAD+QC V +A+ W H GR+A + +++ + + ++ RI A
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDPAD-GDGDGRVSRILA 176
Query: 183 RLRNVLKGDNDIRSAKMTVSM--AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RL ++L+GD + + V H +RRLHQ+M AD + P V+VQ
Sbjct: 177 RLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLMSADLHRAAPVPVPVPALAPAVSVQ 236
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+WA+R YSVV VQC DR KLLFDV CTL DM+YVVFH T++TA RA
Sbjct: 237 SWAERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRA 283
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + L D++ ++ + + F++ +G+ + E+
Sbjct: 244 SVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADGSPIRSEAER 303
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ L+ RS G+ LEL DR GLLSEV + V +A+V T +
Sbjct: 304 EMLTHHLQAAIERRS--LEGVR-LELCAPDRAGLLSEVTRTFRENGLLVAQAEVSTKGDQ 360
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ YV D +P D ID + R+
Sbjct: 361 ACNVFYVTDAAGKAP--DRGAIDAVRERV 387
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 203/290 (70%), Gaps = 12/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 DEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMRTVGVIPSTDSTVIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI+
Sbjct: 129 CDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 189 LRNVLKGSNTPREAKTVVSQGEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQRPDVC 248
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 249 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAY 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + +DG ++V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 361
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ +D I + + +LK N+
Sbjct: 362 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTLDSIRQTIGQTILKVKNN 411
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 203/293 (69%), Gaps = 20/293 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+KLVIRMN PRV IDN ATL+KVDS+ RHG LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDV HVTD NG KL D+ V I+QSL R+ SF L T
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGP----RARSFRSLRRSVGVQAAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL+G DR GLLSEVFAVL DL+C+VV A+VWTHN R+AS++Y+ D SG PI+D +
Sbjct: 127 IELSGRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLA 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---P 235
+I+ L VLKGD D SA VSM TH ERRLHQMM+ADRD++ + S Y P
Sbjct: 187 KIKQLLLYVLKGDRDKHSANTAVSMNSTHKERRLHQMMYADRDFD-LNYTSCSESYQSRP 245
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+VTV+N ++ Y+VVN++C DR KLLFD VCTLTDM+YVV+HATI AY
Sbjct: 246 LVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAY 298
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D+ + +C + Y+ + P V ++N V T+V + R +L + V LTD+ +
Sbjct: 231 DLNYTSCSESYQ------SRPLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYV 284
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A I ++ + + ++G+ ++ E+ + LE R + G+ LEL
Sbjct: 285 VYHATIIAEEPEAYQEYFIRHVDGSPISSEAERQRVIHCLEAAI--RRRTTEGI-KLELC 341
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
DRVGLL++V + + SV A+V T + ++ YV D + S
Sbjct: 342 SEDRVGLLTDVTRIFRENGLSVTRAEVTTRGTQAVNVFYVTDASGNS 388
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 202/294 (68%), Gaps = 19/294 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----------ETIHYGRSNSFNGLTALE 120
DG +FMDVF+VTD +GNK+TDE V+ YI++SL TI S T +E
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMRTIGVTPSTDS---TVIE 119
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTG DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV------LRHSTDY 234
+ LRNVLKG N R AK +S HT+RRLHQMMF DRDYE V ++
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLSHGEVHTDRRLHQMMFEDRDYEHRAVVDDDSSIQDERQR 239
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P V V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 240 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAY 293
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D E A +D+ + P V +DN + ++V V R +L + V LTD+
Sbjct: 219 RDYEHRAVVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQY 278
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALEL 121
++ + ++G ++V ++G+ + E+ + Q LE R + GL LEL
Sbjct: 279 VVFHGSVDTEGTEAYQEYYVRHIDGSPVKSEAEKQRVIQCLEAAINRRVSE--GL-KLEL 335
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TDRVGLLS V + + +V A+V T G+ + YV D SG I D++ ID I
Sbjct: 336 CTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIR 393
Query: 182 ARL-RNVLKGDND 193
+ + +LK N+
Sbjct: 394 QTIGQTILKVKNN 406
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 207/294 (70%), Gaps = 19/294 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 17 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 77 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQ 193
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 194 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 253
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY
Sbjct: 254 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAY 307
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 11 DEYEKLVIRMN-TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+ Y+K +N TP V + N + ++V + R +L + V LTD+ ++ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGL 129
S+G +++ ++G+ + E+ + Q LE R + GL LEL+ DRVGL
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS--EGL-KLELSTGDRVGL 357
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV-- 187
LS+V + + +V A+V T + + YV+D +GS D + ++ I +
Sbjct: 358 LSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDA-AGSSAVDLKTLEAIRQEIGQTVL 416
Query: 188 -LKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+KG D R + S + R L +F R + ++R
Sbjct: 417 QVKGHPDHRKSPPQESPS-----RFLFSSLFRPRSLYSLGLIR 454
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 207/294 (70%), Gaps = 19/294 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 14 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 74 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 130
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 131 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQ 190
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 191 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 250
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY
Sbjct: 251 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAY 304
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 11 DEYEKLVIRMN-TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+ Y+K +N TP V + N + ++V + R +L + V LTD+ ++ +
Sbjct: 238 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 297
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGL 129
S+G +++ ++G+ + E+ + Q LE R + GL LEL+ DRVGL
Sbjct: 298 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS--EGL-KLELSTGDRVGL 354
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV-- 187
LS+V + + +V A+V T + + YV+D +GS D + ++ I +
Sbjct: 355 LSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDA-AGSSAVDLKTLEAIRQEIGQTVL 413
Query: 188 -LKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+KG D R + S + R L +F R + ++R
Sbjct: 414 QVKGHPDHRKSPPQESPS-----RFLFSSLFRPRSLYSLGLIR 451
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 207/294 (70%), Gaps = 19/294 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + +MN PRVVIDN C AT+V VDSA ++GILLE VQVLT+L L++KKAYISS
Sbjct: 17 DEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NG 115
DG +FMDVF+VTD NG K+ DESV+ I ++ IH G + F +
Sbjct: 77 DGGWFMDVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSD 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +ELTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q
Sbjct: 134 YTLIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQ 193
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-Y 234
++ RI+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + +
Sbjct: 194 RLARIKERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPT 253
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PVV+V NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY
Sbjct: 254 PVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAY 307
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 11 DEYEKLVIRMN-TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+ Y+K +N TP V + N + ++V + R +L + V LTD+ ++ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGL 129
S+G +++ ++G+ + E+ + Q LE R + GL LEL+ DRVGL
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS--EGL-KLELSTGDRVGL 357
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV-- 187
LS+V + + +V A+V T + + YV+D +GS D + ++ I +
Sbjct: 358 LSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDA-AGSSAVDLKTLEAIRQEIGQTVL 416
Query: 188 -LKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+KG D R + S + R L +F R + ++R
Sbjct: 417 QVKGHPDHRKSPPQESPS-----RFLFSSLFRPRSLYSLGLIR 454
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 203/290 (70%), Gaps = 12/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 132
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D ++G I D +++ RI+
Sbjct: 133 CDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRIKNL 192
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 193 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 252
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 253 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAY 302
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL +DRVGLLS V + +
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTSDRVGLLSNVTRIFRENSL 365
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 366 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 415
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 208/290 (71%), Gaps = 13/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA RHGILL+ VQVLTDLNL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+VTD +GNKL DE +++Y++++LET G NS G T++EL
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLET-EAGFLNSLRGSVGVMPSKEDTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG+DR GLLSEV AVL DL+C+VV A++WTHN R A++I+V D +G IED +++ I+
Sbjct: 122 TGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RL NV KG++ R+ KMT+S + +RRLHQMMFA RD+ER+ ++ P VT
Sbjct: 182 KRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYVQDKNSRPHVT 241
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V + +DR Y+VV ++ +DR KLLFD VC LTDM+YVVFH T+ T AY
Sbjct: 242 VLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAY 291
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R +L + V LTD+ ++ + + ++ ++G L E+
Sbjct: 251 TVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVDGLPLRSEAER 310
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ + LE R+ + GL LEL+ DR GLLS+V V + + A + T G+
Sbjct: 311 QRVTECLEAAIERRA--WEGL-VLELSTEDRFGLLSDVTRVFRENGLCIKRAVITTKCGK 367
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+V D SG+ + DS+ ++ I ++
Sbjct: 368 AKDTFFVTDV-SGNTV-DSKTVEMIRQQI 394
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 208/290 (71%), Gaps = 13/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA RHGILL+ VQVLTDLNL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+VTD +GNKL DE +++Y++++LET G NS G T++EL
Sbjct: 63 DGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLET-EAGFLNSLRGSVGVMPSKEDTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG+DR GLLSEV AVL DL+C+VV A++WTHN R A++I+V D +G IED +++ I+
Sbjct: 122 TGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RL NV KG++ R+ KMT+S + +RRLHQMMFA RD+ER+ + + P VT
Sbjct: 182 KRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYAQDTNSRPHVT 241
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V + +DR Y+VV ++ +DR KLLFD VC LTDM+YVVFH T+ T AY
Sbjct: 242 VLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAY 291
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 12 EYEKLVIRMNT---PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
++E+L +T P V + + T+V + S R +L + V LTD+ ++ +
Sbjct: 224 DFERLEYAQDTNSRPHVTVLDCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTV 283
Query: 69 SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
+ ++ ++G L E+ + + LE R+ + GL LEL+ DR G
Sbjct: 284 ITGRMEAYQEHYIRHVDGLPLRSEAERQRVTECLEAAIERRA--WEGL-VLELSTEDRFG 340
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
LLS+V V + + A + T G+ +V D SG+ + DS+ ++ I ++
Sbjct: 341 LLSDVTRVFRENGLCIKRAVITTKCGKAKDTFFVTDV-SGNXV-DSKTVEMIRQQI 394
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 202/290 (69%), Gaps = 12/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 129 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 188
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 189 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 248
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+
Sbjct: 249 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAF 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 361
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 362 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 411
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 202/290 (69%), Gaps = 12/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 13 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 132
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 133 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 192
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 193 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 252
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+
Sbjct: 253 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAF 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 365
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 366 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 415
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 202/290 (69%), Gaps = 12/290 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 3 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTG 122
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A++WTHN R A+++ V D +G I D +++ RI+
Sbjct: 123 CDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNL 182
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVT 238
LRNVLKG N R AK VS HT+RRLHQMMF DRDYE V ++ P V
Sbjct: 183 LRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 242
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+
Sbjct: 243 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAF 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEAAIKRRVSE--GL-KLELCTTDRVGLLSNVTRIFRENSL 355
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 356 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 405
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 204/292 (69%), Gaps = 16/292 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERV----DDDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLV 290
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY V
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQV 306
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/296 (54%), Positives = 203/296 (68%), Gaps = 20/296 (6%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+Y+ L+ R+N P VVIDN+ C ATLVKVDSA +HGILLE VQVLTDL+L I KAYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS------------NSFNGLTAL 119
G +FMDVFHVTD G+KL D+ +I YI+QSL S S G TA+
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL+G DR GLLSE+ VL + C+VV A+VWTHN R+A ++YV D +G PI+D +++ R
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY----- 234
++ RL VL+GD++ R A S +THTERRLHQMM ADRDY+ +P S +
Sbjct: 192 MKERLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYD-VPSSTSSINAVLDAR 250
Query: 235 --PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PV++++N ++ YSVV+VQCKDR KLLFD VCTLTDMEYVVFHA+ G AY
Sbjct: 251 IRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAY 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D + P+ ++ P + + N + ++V V R +L + V LTD+
Sbjct: 232 RDYDVPSSTSSINAVLDARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEY 291
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLT 117
++ A +DG + +++ ++G L E V+ +E ++E GL
Sbjct: 292 VVFHASARADGPYAYQEYYIRHMDGCTLDLDAEQERVVKCLEAAIE------RRVSEGLR 345
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
LEL DRVGLLS+V V + SV A V T R ++ YV D SG +
Sbjct: 346 -LELCTRDRVGLLSDVTRVFREKGLSVTRADVSTRGDRAVNVFYVTD-TSGKAV 397
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 203/290 (70%), Gaps = 16/290 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERV----DDDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAY 304
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 203/290 (70%), Gaps = 16/290 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL RMN PRVVIDN AT+++VDSA + GILLE VQ+LTDLNL+I KAYISS
Sbjct: 19 DEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISS 78
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------ETIHYGRSNSFNGLTALELTG 123
DG +FMDVF+VTD +GNK+TDE ++ YI +SL T+ TA+EL G
Sbjct: 79 DGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMG 138
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
+DR GLLSEV AVL +L+C++V A+VWTHN R A++++V D +GS I DSQ++ I+
Sbjct: 139 SDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKEL 198
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-----PVVT 238
L NVL G N R AK V+ THT+RRLHQMMF DRDYER+ D+ P V
Sbjct: 199 LCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERV----DDDDFDEKQRPNVD 254
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V NW+D+ YSVV ++C+DR KL+FD VCTLTDM+YVVFHA I+ G +AY
Sbjct: 255 VVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAY 304
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V ++ R ++ + V LTD+ ++ A I ++G +++
Sbjct: 251 PNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIK 310
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + LE R + GL LEL TDRVGLLS V + +
Sbjct: 311 HIDGSPVKSDAERQRVIHCLEAAIERRVSE--GL-KLELCTTDRVGLLSNVTRIFRENSL 367
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+V A+V T G+ + YV+ + I DS+ I+ I + N +
Sbjct: 368 TVTRAEVTTKGGKAVNTFYVR--GASGCIVDSKTIESIRQTIGNTI 411
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/296 (53%), Positives = 203/296 (68%), Gaps = 20/296 (6%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+Y+ L+ R+N P VVIDN+ C ATLVKVDSA +HGILLE VQVLTDL+L I KAYISSD
Sbjct: 12 DYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS------------NSFNGLTAL 119
G +FMDVFHVTD G+KL D+ +I YI+QSL S S G TA+
Sbjct: 72 GGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAI 131
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL+G DR GLLSE+ VL + C+VV A+VWTHN R+A ++YV D +G PI+D +++ R
Sbjct: 132 ELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLAR 191
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY----- 234
++ +L VL+GD++ R A S +THTERRLHQMM ADRDY+ +P S +
Sbjct: 192 MKEQLSQVLRGDDENRLATTDFSSGLTHTERRLHQMMLADRDYD-VPSSTSSINAVLDAR 250
Query: 235 --PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PV++++N ++ YSVV+VQCKDR KLLFD VCTLTDMEYVVFHA+ G AY
Sbjct: 251 IRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAY 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+D + P+ ++ P + + N + ++V V R +L + V LTD+
Sbjct: 232 RDYDVPSSTSSINAVLDARIRPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEY 291
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLT 117
++ A +DG + +++ ++G L E V+ +E ++E GL
Sbjct: 292 VVFHASARADGPYAYQEYYIRHMDGCTLDLDAEQERVVKCLEAAIE------RRVSEGLR 345
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
LEL DRVGLLS+V V + SV A V T R ++ YV D SG +
Sbjct: 346 -LELCTRDRVGLLSDVTRVFREKGLSVTRADVSTRGDRAVNVFYVTD-TSGKAV 397
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/302 (54%), Positives = 206/302 (68%), Gaps = 30/302 (9%)
Query: 4 MEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKV-------DSARRHGILLEAVQVL 56
MEW L+EYEKLVIRM+TP+VVIDNA CPTATLV+V DSAR G+LLEAVQVL
Sbjct: 1 MEW---LNEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVL 57
Query: 57 TDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-------YGR 109
DL+L I KAYISSDGR+FMDVFHVTD G KLTD SVISYI+QSL +
Sbjct: 58 ADLDLSINKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLAAWNGPVGIDPSAS 117
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ GLT LELTG DR GL+SEVFAVLAD+ C VV+A+ W+H GR+A L+Y++D +
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADV-- 175
Query: 170 PIEDSQQIDRIEARLRNVLKGD------NDIRSAKMTVSMAVTHTERRLHQMMF--ADRD 221
+ RIEARL +L+G +D + +V+H +RRLHQ+M A R+
Sbjct: 176 ---AAAGAARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAARE 232
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
++ D P V+V++WA+R YSVV VQC DR KLL+DVVCTLTDM+YVVFH T++
Sbjct: 233 HDDRRASPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVD 292
Query: 282 TA 283
T+
Sbjct: 293 TS 294
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDV 78
+TP V +++ ++V V R +L + V LTD++ ++ + S+ G +
Sbjct: 244 DTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVDTSASGGARQE- 302
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
F++ +G+ ++ ++ + + L+ RS F G+ LEL DR GLLS+V
Sbjct: 303 FYIRSADGSPISSDAEMRRVSLCLQDAIERRS--FEGVR-LELCTPDRPGLLSDVTRTFR 359
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
+ V +A+V T +++ YV +G + S
Sbjct: 360 ENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRS 395
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 201/287 (70%), Gaps = 9/287 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDSA +HGILLE VQVLTDLNL++ KAYIS
Sbjct: 9 DEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYISC 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-YGRSNSFNGL------TALELTG 123
DG +FMDVF+VTD +GNK+TDE V+ YI++SLE+ + S G+ T +EL G
Sbjct: 69 DGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRSVGVKPSVDYTVIELIG 128
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSEV AVL L+C+VV A+VWTHN R A++++V D +GS I D +++ RI+
Sbjct: 129 NDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRIKGL 188
Query: 184 LRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHSTDYPVVTVQN 241
L NVL+G N + AK VS VTH ERRLHQMMFADRDYE + + P V V N
Sbjct: 189 LSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDVMEDQQKPNVKVVN 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
W D YSVV ++ KDR KLLFD VCTLTDM+YVVFHA + G AY
Sbjct: 249 WCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAY 295
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + S R +L + V LTD+ ++ A + ++G +++ ++G+ + ++
Sbjct: 255 SVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDGSPVKSDAER 314
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ LE R + GL LEL TDRVGLLS+V + + +V A+V T G+
Sbjct: 315 QRVIHCLEAAIRRRVS--EGL-KLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTKAGK 371
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKMTVSMAVTHTERRL 212
+ YV+D SG P+ DS+ ID I + + KG + + K + T R L
Sbjct: 372 AINTFYVRD-PSGYPV-DSKTIDSIRELIGQTILKVKGSSSPKEQKQASQDSPT---RFL 426
Query: 213 HQMMFADRDYERMPVLR 229
+F R + ++R
Sbjct: 427 FGGLFRSRSFVNFGLIR 443
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 213/294 (72%), Gaps = 18/294 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN VC AT+++VDS +HGILL+ VQVLTD+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+V D +GNK+ D+ VI YI++ LE+ + + S G T++EL
Sbjct: 63 DGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLES-NASFAPSLRGSVGVMPSEDHTSIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
+G DR GLLSEV AVLADL+C+VV A++WTHN R A++++V D ++G ++D +++ I+
Sbjct: 122 SGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTIK 181
Query: 182 ARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER-----MPVLRHSTDYP 235
L NVLKG+ND+++AKMT+S +T ERRLHQ+MFADRDYER + L + P
Sbjct: 182 ELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSRP 241
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA-GERAY 288
VTV N ++ YSV+ ++ KDR KLLFD+VCTLTDMEYVVFH +N E AY
Sbjct: 242 HVTVLNI-EKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAY 294
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF--FMDVFHVTDLNGNKLTDES 93
+++ + S R +L + V LTD+ ++ +++ GR F++ ++G ++ ++
Sbjct: 253 SVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNA-GRKEEAYQEFYIRHVDGLPISSDA 311
Query: 94 VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ Q LE R++ GL LEL DRVGLLS++ + + A++ T
Sbjct: 312 ERERVIQCLEAAIERRASE--GL-ELELCTEDRVGLLSDITRTFRENSLCIKRAEISTKG 368
Query: 154 GRIASLIYVKDCNSGSPIEDSQQIDRI 180
G YV D +GSP+ D + +D I
Sbjct: 369 GIAKDTFYVTDV-TGSPV-DPKIVDSI 393
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/292 (54%), Positives = 202/292 (69%), Gaps = 14/292 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDL+L I KAYISS
Sbjct: 14 DEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYISS 73
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL------TALELTG 123
DG +FMDVF+VT +GNK+TDE V+ YI++SL + S G+ T +ELTG
Sbjct: 74 DGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLRSVGVIPSTDSTVIELTG 133
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GLLSE+ AVL L+CSV+ A+VWTHN R A+++ V D +GS + D +++ I++
Sbjct: 134 CDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLIKSL 193
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-------LRHSTDYPV 236
LRNVLKG N + AK VS HT+RRLHQMMF DRDYE + ++ P
Sbjct: 194 LRNVLKGSNTPKEAKTVVSQGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDERQRPD 253
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V V NW D+ YSVV V+CKDR KLLFD VCTLTDM+YVVFH +++T G A+
Sbjct: 254 VCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAF 305
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 38/166 (22%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G + F
Sbjct: 252 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEG---TEAFQ-- 306
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
YG LEL TDRVGLLS V + +
Sbjct: 307 -----------------------EYG--------LKLELCTTDRVGLLSNVTRIFRENSL 335
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+V A+V T G+ + YV D SG I D++ ID I + L
Sbjct: 336 TVTRAEVKTKGGKAVNTFYVSDA-SGYSI-DAKTIDSIRQTIGKTL 379
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/295 (53%), Positives = 208/295 (70%), Gaps = 22/295 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HGILLE VQVLTD+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF-------------NGLT 117
DG +FMDVF+V D +GNK+ D+ VI+YI ++LE R SF T
Sbjct: 63 DGGWFMDVFNVVDGDGNKIRDKGVINYITKTLE-----RDASFVPPMRGTVGVMPSEDHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
++EL+GTDR GLLSEV AVLADL C+VV A++WTHN R A++++V D ++G IED ++
Sbjct: 118 SIELSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDY---ERMPVLRHSTD 233
+I+ L NVLKG+ND+++AKMT+S TH ERRLHQ+MFADRDY ER + + +
Sbjct: 178 SKIKELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGKDKSS 237
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV + ++ Y+V+ ++ KDR KLLFD VCTLTDM+YVVFH ++T AY
Sbjct: 238 RPHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAY 292
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + + + T++ + S R +L + V LTD+ ++ + + +++
Sbjct: 239 PHVTVLDCIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIR 298
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ ++ + + LE R++ GL LEL DR GLLS++ V +
Sbjct: 299 HVDGLPMSSDAERERVIECLEAAIERRASE--GL-ELELRTEDRFGLLSDITRVFRENSL 355
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ A++ T G+ YV D +G+P+ + Q ID I ++
Sbjct: 356 CIKRAEISTEGGKAKDTFYVTDV-TGNPV-NPQIIDSIRQQI 395
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 206/308 (66%), Gaps = 25/308 (8%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L R+N PRVVIDN V AT++K+DS+ RHGILL+ VQVLTDL+L I K
Sbjct: 11 WPYFDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILK 70
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-----QSLETIHYGRSNSFNGL---T 117
A+ISSDG +FMDVFHVTD +GNKL+DE VI++IE Q+ T R+ L T
Sbjct: 71 AFISSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHT 130
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS-GSPIEDSQQ 176
A+ELTG DR GLLSE+ AVLA L C+VV A+VWTHN R+A ++YV D G P++D +
Sbjct: 131 AIELTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTK 190
Query: 177 IDRIEARLRNVLKGDN-DIRSAKMTVSMAVTHTERRLHQMMFADR-----------DYER 224
+ I+ L V+KGD+ D ++A+ +M +THTERRLHQMM AD+
Sbjct: 191 LCHIKQMLGQVMKGDSLDGKTARTDFAMGLTHTERRLHQMMSADKEEEMEVAEEEAALSP 250
Query: 225 MPV-LRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
P + S DY P VTV+N ++ YSVV VQC DR KLLFD VCTLTDMEYVVFHATI
Sbjct: 251 APTSISDSVDYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATI 310
Query: 281 NTAGERAY 288
++ G A+
Sbjct: 311 DSEGPNAF 318
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N V ++V V A R +L + V LTD+ ++ A I S+G +++
Sbjct: 265 PTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDSEGPNAFQEYYIR 324
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
L+G L E+ + + LE R++ LEL+ DR+GLLS+V + +
Sbjct: 325 HLDGYTLNTETERQRVVRCLEAAILRRASQG---VRLELSTQDRIGLLSDVTRIFRENGL 381
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGS 169
SV A+V T + ++ YV D N GS
Sbjct: 382 SVARAEVTTRDDMAVNVFYVTDANGGS 408
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 204/292 (69%), Gaps = 19/292 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLV RMN PRV +DN ATL+KVDSA + G LLE VQVL DLNL+I++AYISS
Sbjct: 12 DEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD GNKL++ V I+QSL R SF L T
Sbjct: 72 DGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGP----RGRSFRSLRRSVGVQAAEEHTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G PI+D ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLG 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YP 235
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY++ + ST P
Sbjct: 188 KIKQLLLFVLKGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDQDDLDCGSTSERRKP 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+VTV++ AD+ Y+VVN++ DR KLLFD VCTLTDM+YVV+HAT+ G A
Sbjct: 248 LVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEA 299
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ T+V + S R +L + V LTD+ ++ A + ++G +++
Sbjct: 247 PLVTVESCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIR 306
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ ++ E+ + LE R++ G+ LEL DR GLLS+V + +
Sbjct: 307 HMDGSPISSEAERQRVIHCLEAAIRRRTS--EGIR-LELCSDDRAGLLSDVTRIFRENGL 363
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D SG+P++
Sbjct: 364 SVTRAEVTTRGTQAVNVFYVTDA-SGNPVK 392
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 202/302 (66%), Gaps = 31/302 (10%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 17 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 77 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRXAVGVEPS 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 132 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 191
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER------MP 226
++++ RI+ RL NV +G + R AK V+ TH ERRLHQMMF DRDYER
Sbjct: 192 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 249
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 250 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 309
Query: 287 AY 288
AY
Sbjct: 310 AY 311
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N + ++V V R +L + V LTD+ ++ + ++G +++
Sbjct: 258 PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIR 317
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G + E+ I Q LE R + GL LEL+ DRVGLLS+V + +
Sbjct: 318 HIDGCPVNSEAERKRIIQCLEAAIERRVS--EGLK-LELSTGDRVGLLSDVTRIFRENGL 374
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A+V T + YV+D +GS +E
Sbjct: 375 TVTRAEVSTRGDEAVNTFYVRDA-AGSAVE 403
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 202/302 (66%), Gaps = 31/302 (10%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 17 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 76
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 77 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPS 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 132 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 191
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER------MP 226
++++ RI+ RL NV +G + R AK V+ TH ERRLHQMMF DRDYER
Sbjct: 192 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 249
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 250 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 309
Query: 287 AY 288
AY
Sbjct: 310 AY 311
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N + ++V V R +L + V LTD+ ++ + ++G +++
Sbjct: 258 PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIR 317
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G + E+ I Q LE R + GL LEL+ DRVGLLS+V + +
Sbjct: 318 HIDGCPVNSEAERKRIIQCLEAAIERRVS--EGLK-LELSTGDRVGLLSDVTRIFRENGL 374
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A+V T + YV+D +GS +E
Sbjct: 375 TVTRAEVSTRGDEAVNTFYVRDA-AGSAVE 403
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 202/302 (66%), Gaps = 31/302 (10%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISS
Sbjct: 18 DEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISS 77
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF------------- 113
DG +FMDVF VT+ +G+K+TDESV+ YI +S+ G + F
Sbjct: 78 DGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPS 132
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ T +ELTGTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D
Sbjct: 133 SDHTLIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSD 192
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER------MP 226
++++ RI+ RL NV +G + R AK V+ TH ERRLHQMMF DRDYER
Sbjct: 193 AERVGRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRA 250
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
S PVV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G
Sbjct: 251 AASGSNPGPVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPE 310
Query: 287 AY 288
AY
Sbjct: 311 AY 312
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N + ++V V R +L + V LTD+ ++ + ++G +++
Sbjct: 259 PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIR 318
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G + E+ I Q LE R + GL LEL+ DRVGLLS+V + +
Sbjct: 319 HIDGCPVNSEAERKRIIQCLEAAIERRVS--EGLK-LELSTGDRVGLLSDVTRIFRENGL 375
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A+V T + YV+D +GS +E
Sbjct: 376 TVTRAEVSTRGDEAVNTFYVRDA-AGSAVE 404
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 208/296 (70%), Gaps = 23/296 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-------GL------T 117
DG +FMDVF+VTD NGNK+ D+ VI YI++ LE ++ SF G+ T
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLE-----KNPSFETSMRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVLADL+C+VV A++WTHN R A++++V D +SG IED ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVL----RHST 232
I L NVL+G +D ++AK +S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKG 237
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+P VTV + +R Y+VV ++ KDR KLLFD+VCTLTDM+YVVFH + T AY
Sbjct: 238 PFPHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAY 293
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + + T+V + + R +L + V LTD+ ++ + ++ F++
Sbjct: 240 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 299
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + Q LE R++ G+ LEL DRVGLLS++ + +
Sbjct: 300 HVDGFPISSEAERERLIQCLEAAIERRASE--GM-ELELCTEDRVGLLSDITRIFRENSL 356
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ A++ T NG+ YV D +G+P+ D + ID I ++
Sbjct: 357 CIKRAEISTENGKAKDTFYVTDV-TGNPV-DPKSIDSIRRQI 396
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R G+L + ++ + +L IK+A IS++ D F+VTD+ GN + +S+ S Q +T
Sbjct: 340 RVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDT 399
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
+ + NS L+ GT +G L F
Sbjct: 400 VLQVKHNS--SLSPKPPQGTT-IGFLFGSF 426
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 196/300 (65%), Gaps = 23/300 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVK-----VDSARRHGILLEAVQVLTDLNLLIKKA 66
EY+ L +R++ P VVIDN CP ATL+K VDS +HGILLE VQVLTDL+L I KA
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----------YGRSNSFNG- 115
YISSDG +FMDVFHVTD GNKLTDE +I YI+QSL GR S
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSLRSN 125
Query: 116 --LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLS++ VL D+ C+VV A+VWTHN R+A ++YV D +G PIED
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD-----RDYERMPVL 228
+++ I+ARL L+GD + +K + MAV HTERRLHQ+M AD + V
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSADFAAIQPESTNTFVA 245
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P ++VQN A++ YSVVNV+C DR KLLFD VCTLTDM+YVVFHA I + G AY
Sbjct: 246 AADKTRPAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAY 305
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + + N ++V V R +L + V LTD+ ++ A I S+G F +++
Sbjct: 252 PAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E+ Y+ + LE R+ G LEL DRVGLLS+V + +
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEAAIERRT---GGGIRLELCTKDRVGLLSDVTRIFRENGL 368
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV D SG+P++
Sbjct: 369 SVTRADVSTQGDKAVNVFYVTDA-SGNPVD 397
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 197/300 (65%), Gaps = 23/300 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVK-----VDSARRHGILLEAVQVLTDLNLLIKKA 66
EY+ L +R++ P VVIDN CP ATL+K VDS +HGILLE VQVLTDL+L I KA
Sbjct: 6 EYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAISKA 65
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----------YGRSNSFNG- 115
YISSDG +FMDVFHVTD GNKL DE +I YI+QSL GR S
Sbjct: 66 YISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSLRSN 125
Query: 116 --LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLS++ VL D+ C+VV A+VWTHN R+A ++YV D +G PIED
Sbjct: 126 TEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIED 185
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMM---FADRDYERMPVLRH 230
+++ I+ARL L+GD + +K + MAV HTERRLHQ+M FA E
Sbjct: 186 EKKLAVIKARLSQALQGDESGKGSKTDIPMAVLHTERRLHQIMSADFAAIQPESTNTFVA 245
Query: 231 STDY--PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ D P ++VQN A++ YSVVNV+CKDR KLLFD VCTLTDM+YVVFHA I + G AY
Sbjct: 246 AADKTRPAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAY 305
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + + N ++V V R +L + V LTD+ ++ A I S+G F +++
Sbjct: 252 PAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E+ Y+ + LE R+ G LEL DRVGLLS+V + +
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEAAIERRT---GGGIRLELCTKDRVGLLSDVTRIFRENGL 368
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV D SG+P++
Sbjct: 369 SVTRADVSTQGDKAVNVFYVTDA-SGNPVD 397
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 209/288 (72%), Gaps = 9/288 (3%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEY KL+ RMN+PRVVIDN C AT+V+VD+ R+G LL+ VQVLTDLNL+I KAYIS
Sbjct: 5 VDEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYIS 64
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE----TIHYGRSN----SFNGLTALEL 121
SDG +FMDVF+VT +GNK+ DES+++YI+++LE ++ RS+ T++EL
Sbjct: 65 SDGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIEL 124
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
+GTDR GLLSEV AVL DL CSVV A++WTHN R+A+++++ + ++G +E+ +++ I+
Sbjct: 125 SGTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIK 184
Query: 182 ARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
LRNVLKG++ RS K+++S TH RRLHQMMFA RD+ER+ + P V V
Sbjct: 185 ELLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESAKEKGVEPCVIVS 244
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ AD+ Y+VV V+C DR KLLFD V LTDM+YVVFH T+ T G+ AY
Sbjct: 245 DCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAY 292
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++ + T+V V R +L + V LTD+ ++ + + G+ +++
Sbjct: 239 PCVIVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIR 298
Query: 83 DLNGNKLTDESVISYIEQSLETI--------HYGRSNSFNGLTALELTGTDRVGLLSEVF 134
++G ++ E+ + + LE + R+ + + LEL DR GLLS++
Sbjct: 299 HVDGLPISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDIT 358
Query: 135 AVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ + S+ A++ T NG+ +V D S
Sbjct: 359 RIFRENGLSIQRAEISTKNGKAKDTFFVTDVAGNS 393
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/291 (54%), Positives = 203/291 (69%), Gaps = 18/291 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA ATL+KVDSA + G LLE VQVLTDLNL+I++AYISS
Sbjct: 11 DEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVF+VTD +GNKL+++ V I+QSL R SF L T
Sbjct: 71 DGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGP----RGRSFRSLRRSVGVQAAAENTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSE+FA+L DL+C+VV ++VWTHN R+AS++Y+ D +G PI+D ++
Sbjct: 127 IELTGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLT 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--YPV 236
+I+ L VLKGD D RSA VS+ TH ERRLHQMM+ADRDY+ S P
Sbjct: 187 KIKQLLLYVLKGDRDKRSANTAVSVDSTHKERRLHQMMYADRDYDMDDADFGSASERKPF 246
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VT++N D+ Y++VN++C DR KLLFD VCTLTDM+YVV+H TI G A
Sbjct: 247 VTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEA 297
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N V T+V + R +L + V LTD+ ++ I ++G + +
Sbjct: 245 PFVTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIR 304
Query: 83 DLNGNKLTDES----VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
++G+ ++ E+ VI+ +E ++ R + G+ LEL DRVGLLS+V +
Sbjct: 305 HMDGSPVSSEAERQRVINCLEAAI------RRRTSEGVR-LELCSEDRVGLLSDVTRIFR 357
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+ SV A+V T + ++ YV D +SG P+++
Sbjct: 358 ENGLSVTRAEVTTRGSQAVNVFYVTD-SSGYPVKN 391
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 202/303 (66%), Gaps = 25/303 (8%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W + L DE+EKLVIRMN PRV +DN T TL+KVDSA + G LLE VQVLTD+NL+
Sbjct: 4 WTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
+++AYISSDG +FMDVFHVTD NG K+ E V I+QSL + +
Sbjct: 64 VRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAA 123
Query: 117 --TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +ELTG DR GLLSEVFA+LADL+C+VV A+VWTHN R+AS++Y+ D +G PI++
Sbjct: 124 EHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNP 183
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ +I+ L VL+GD D ++A VS TH +RRLHQ+M+ADRDY+ + DY
Sbjct: 184 DRLAKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYD-----IYDGDY 238
Query: 235 PV---------VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VTV + D+ Y+VVN++C DR KLLFD VCT+TDM+YVV+H T+N G
Sbjct: 239 SCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGP 298
Query: 286 RAY 288
AY
Sbjct: 299 EAY 301
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
N V +D+ + T+V + R +L + V +TD+ ++ ++++G ++
Sbjct: 246 NKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYY 305
Query: 81 VTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ ++G ++ E+ + LE R++ LEL+G DRVGLLS+V + +
Sbjct: 306 IRHVDGYPISSEAERQRVIHCLEAAVRRRTSEG---VKLELSGEDRVGLLSDVTRIFREN 362
Query: 141 QCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D SG+P++
Sbjct: 363 GLSVCRAEVTTRGSQAMNVFYVTDV-SGNPVK 393
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/302 (51%), Positives = 201/302 (66%), Gaps = 16/302 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N PRV +DN C +TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MASVCWPYFDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL------ETIHYGRS---- 110
L+I KAYISSDG +FMDVFHVTD G K+TD I YIE++L E +
Sbjct: 61 LIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGV 120
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+S G TA+EL G DR GLLSE+ AVLA+L +VV A+VWTHN RIA ++YV D +
Sbjct: 121 HSVGGHTAIELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRA 180
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ D ++ +E +L+N+L+G + + + + SM TH +RRLHQM+FADRDYE ++
Sbjct: 181 VADPTRLSIMEDQLKNILRGCENDEAGRTSFSMGFTHVDRRLHQMLFADRDYEG-GIVAT 239
Query: 231 STDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
DYP +TV+ D+ YSVV V+CKDR KL+FD+VCTLTDM+YVVFHATI++ G
Sbjct: 240 EVDYPPSIKPKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGP 299
Query: 286 RA 287
A
Sbjct: 300 HA 301
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ ++ ++V V R ++ + V LTD+ ++ A ISSDG +++
Sbjct: 249 PKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYIR 308
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + LE R + GL+ LEL DRVGLLSEV +L +
Sbjct: 309 HMDGCVLDTEGEKERVIKCLEAAIRRRVS--EGLS-LELCAKDRVGLLSEVTRILRENGL 365
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T + ++ YV+D SG+P++
Sbjct: 366 AVSRAGVMTIGEQATNVFYVRDA-SGNPVD 394
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 200/289 (69%), Gaps = 23/289 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C A++++VDSA +HGILLE VQVL DLNL+I KAYISS
Sbjct: 3 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET----IHYGRSN----SFNGLTALELT 122
DG +FMDVF+VTD +GNK+TDE ++ YI++SL + I R + T++ELT
Sbjct: 63 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 122
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G+DR GLLSEV AVL L+CSVV A+VWTHN R A++++V D +G I D +++ +++
Sbjct: 123 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 182
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD---YPVVTV 239
L N+ ++ VTHTERRLHQMMFADRDYER + +D P V V
Sbjct: 183 LLCNL----------RLWSLHGVTHTERRLHQMMFADRDYER--IYNDGSDEAQRPNVNV 230
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
NW D+ YSVV ++ KDR KLLFD VCTLTDM+YVVFHA ++ G AY
Sbjct: 231 VNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAY 279
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + S R +L + V LTD+ ++ A + ++G +++
Sbjct: 226 PNVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIR 285
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q LE R + GL LEL TDRVGLLS+V + +
Sbjct: 286 HIDGSPVKSDAERQRVIQCLEAAIERRVSE--GL-KLELCTTDRVGLLSDVTRIFRENSL 342
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
SV A+V T G+ + +V+D SG P+ D++ ID I
Sbjct: 343 SVTRAEVTTRAGKAVNTFHVRDA-SGYPV-DAKTIDSI 378
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 202/303 (66%), Gaps = 25/303 (8%)
Query: 6 WPACL---DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W + L DE+EKLVIRMN PRV +DN T TL+KVDSA + G LLE VQVLTD+NL+
Sbjct: 4 WTSSLPLDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLI 63
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------ 116
+++AYISSDG +FMDVFHVTD NG K+ E V I+QSL + +
Sbjct: 64 VRRAYISSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAA 123
Query: 117 --TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +ELTG DR GLLSEVFA+LADL+C+VV A+VWTHN R+AS++Y+ D +G PI++
Sbjct: 124 EHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNP 183
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ +I+ L VL+GD D ++A VS TH +RRLHQ+M+ADRDY+ + DY
Sbjct: 184 DRLTKIKHLLLYVLRGDIDKKNANTAVSFCSTHKDRRLHQLMYADRDYD-----IYDGDY 238
Query: 235 PV---------VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VTV + D+ Y+VVN++C DR KLLFD VCT+TDM+YVV+H T+N G
Sbjct: 239 SCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGP 298
Query: 286 RAY 288
AY
Sbjct: 299 EAY 301
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
N V +D+ + T+V + R +L + V +TD+ ++ ++++G ++
Sbjct: 246 NKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYY 305
Query: 81 VTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ ++G ++ E+ + LE R++ LEL+G DRVGLLS+V + +
Sbjct: 306 IRHVDGYPISSEAERQRVIHCLEAAVRRRTSEG---VKLELSGEDRVGLLSDVTRIFREN 362
Query: 141 QCSVVEAKVWTHNGRIASLIYVKD 164
SV A+V T + ++ YV D
Sbjct: 363 GLSVCRAEVTTRGSQAMNVFYVTD 386
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 199/306 (65%), Gaps = 31/306 (10%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEY+KLV+RMN PRV +DN TATLVKVDS ++G LLE VQVLTDL L I +AYIS
Sbjct: 17 VDEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYIS 76
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 77 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGA----GSLSFRGPPERLVAVEAEAEE 132
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVL DL+C++V ++VWTH+GR+A+L+YV D ++ IED
Sbjct: 133 AQTTIELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDP 192
Query: 175 QQIDRIEARLRNVLKGDN-DIRSAKMTVSMAVTHTERRLHQMMFADRDY----------- 222
++D ++ LR+VL+G + D ++++ +S V H RRLHQMM ADR
Sbjct: 193 ARLDTVKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVG 252
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
ER PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 253 ERGEASGAGGGMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIA 312
Query: 283 AGERAY 288
G AY
Sbjct: 313 EGSEAY 318
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF--- 79
P V +++ TLV V R +L + V LTD+ ++ + ++G +
Sbjct: 265 PVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 324
Query: 80 HVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
H+ D G D + ++ Y GL LEL DRVGLLS+V + +
Sbjct: 325 HLDDSTGGSGEDRDRLCRCLEAAIQRRY-----TEGLR-LELCCEDRVGLLSDVTRIFRE 378
Query: 140 LQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
SV A+V T + A++ YV D SG P++ +D + A +
Sbjct: 379 HGLSVTHAEVDTRGAQAANVFYVVDA-SGEPVQ-GHAVDAVRAEI 421
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 200/304 (65%), Gaps = 17/304 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N PRV +DN C TL+KVDS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS---------- 110
+I KAYISSDG +FMD+FHVTD G K+ D I YIE++L Y +
Sbjct: 61 FIITKAYISSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSVGDYTAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTC 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
P++D ++ +E +L+N+L+G ++D ++++ + SM TH +RRLHQM FADRDYE V
Sbjct: 181 RPVDDPTRLSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEGGGV 240
Query: 228 LRH----STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
S+ P +TV+ ++ YSVV+V CKDR KLLFD+VCTLTDM+YVVFHATI++
Sbjct: 241 TNEVEYPSSFKPKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSD 300
Query: 284 GERA 287
G A
Sbjct: 301 GPYA 304
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ ++ ++V V R +L + V LTD+ ++ A ISSDG + +++
Sbjct: 252 PKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEYYIR 311
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + LE R GL+ LEL DRVGLLSEV VL +
Sbjct: 312 HMDGCTLDTEGEKERVIKCLEAAI--RRRVCEGLS-LELCAKDRVGLLSEVTRVLRENGL 368
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV+D +SG+P++
Sbjct: 369 SVTRAGVTTVGEQAMNVFYVRD-SSGNPVD 397
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/291 (54%), Positives = 202/291 (69%), Gaps = 18/291 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DNA TATL++VDSA + G LLE VQVLTDLNLLI++AYISS
Sbjct: 11 DEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYISS 70
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD +GNKL+++ V I+QSL R SF L T
Sbjct: 71 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGP----RGPSFRSLRRSVDVQGAAEHTT 126
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSE+FAVLA L+C+VV +++WTHN R+AS++Y+ D +G PI+D ++
Sbjct: 127 IELTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLT 186
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL--RHSTDYPV 236
+I+ L +L GD D RSA VS+ TH ERRLHQMM+ADRDY+ S
Sbjct: 187 KIKQLLLCILIGDRDKRSANTAVSVGSTHKERRLHQMMYADRDYDVDDADCSSASERNRF 246
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VTV+N D+ Y+VVN++C DR KL+FD VCTLTDM+YVV+HA I G A
Sbjct: 247 VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEA 297
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V ++N V T+V + R ++ + V LTD+ ++ A I ++G + + +
Sbjct: 247 VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHM 306
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ + E+ + LE R++ LEL DRVGLLS+V + + SV
Sbjct: 307 DGSPINSEAERQRLINCLEAAIRRRTSEG---VRLELCSEDRVGLLSDVTRIFRENGLSV 363
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIE 172
A+V T + ++ +V D +SG P++
Sbjct: 364 TRAEVTTRGSQAVNVFFVTD-SSGHPVK 390
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 197/285 (69%), Gaps = 21/285 (7%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN PRV IDN CP AT++ VDSA ++G+LLE VQVLTDL L++KKAYISSDG +FMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 80 HVTDLNGNKLTDESVISYIEQSL---------------ETIHYGRSNSFNGLTALELTGT 124
+VT+ G+K+ DESV+ I+ + I S+ + T +ELTGT
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDY---TLIELTGT 117
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVL +L+C+VV A++WTHN R A+++ V D SG I D++++ RI+ RL
Sbjct: 118 DRPGLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERL 177
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS-TDYPVVTVQNWA 243
NV KG + R AK TV+M +THTERRLHQMM DRDY+R R S + +V+V NW
Sbjct: 178 CNVFKGRS--RDAKTTVAMGITHTERRLHQMMLEDRDYDRHDKDRASGSPTSMVSVVNWL 235
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+ YSVV ++CKDR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 236 QKDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAY 280
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + R +L + V LTD+ ++ + ++G +++ ++G+ + E+
Sbjct: 240 SVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSPVNSEAER 299
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
I LE R + GL LEL+ DRVGLLS+V + + +V A+V T +
Sbjct: 300 KRIIHCLEAAIERRVS--EGL-KLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTKGDK 356
Query: 156 IASLIYVKDCNSGSPIE 172
+ YV+D +GS +E
Sbjct: 357 AINTFYVRDA-AGSSVE 372
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/297 (50%), Positives = 199/297 (67%), Gaps = 15/297 (5%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L R+N PRV +DN C +TL+KVDS + GILLE VQ+LTDL+L+I K
Sbjct: 6 WPYFDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITK 65
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL--------- 116
AYISSDG +FMDVFHVTD G K+ D I YIE++L +++G
Sbjct: 66 AYISSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGD 125
Query: 117 -TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
TA+ELTG DR GLLSE+ AVLA+L +VV A+VWTHN RIA ++YV D + ++D
Sbjct: 126 HTAIELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPT 185
Query: 176 QIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD- 233
++ +E +L+N+L+G D+D + + + SM TH +RRLHQM+FADRDYE V D
Sbjct: 186 RLSAMEDQLKNILRGCDDDEKEGRTSFSMGFTHVDRRLHQMLFADRDYEGGIVATEIHDP 245
Query: 234 ---YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P +TV++ ++ YSVV V+CKDR KL+FD+VCTLTDM+YVVFHATI++ A
Sbjct: 246 PSFKPKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHA 302
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ +++ ++V V R ++ + V LTD+ ++ A ISSD +++
Sbjct: 250 PKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYIR 309
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + LE R + GL+ LEL DRVGLLSEV +L +
Sbjct: 310 HMDGCVLDTEGEKDRVIKCLEAAIRRRVS--EGLS-LELCAKDRVGLLSEVTRILRENGL 366
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV+D SG+P++
Sbjct: 367 SVSRAGVMTIGEQAMNVFYVRDA-SGNPVD 395
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 204/300 (68%), Gaps = 19/300 (6%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++LLI K
Sbjct: 24 WPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITK 83
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS--------NSF 113
AYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++ +S
Sbjct: 84 AYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSV 143
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D + ++D
Sbjct: 144 GDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDD 203
Query: 174 SQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE +
Sbjct: 204 PTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEA- 262
Query: 233 DYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++ G A
Sbjct: 263 DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYA 322
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ ID + V V R ++ + V LTD+ ++ A ISSDG + + +
Sbjct: 270 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 329
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L +E + + LE R GL+ LEL DRVGLLSEV VL +
Sbjct: 330 HMDGCTLDNEGEKERVIKCLEAAI--RRRVSEGLS-LELCAKDRVGLLSEVTRVLREHGL 386
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV+D SG P++
Sbjct: 387 SVTRAGVSTVGEQAMNVFYVRDA-SGKPVD 415
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 204/300 (68%), Gaps = 19/300 (6%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++LLI K
Sbjct: 25 WPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITK 84
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS--------NSF 113
AYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++ +S
Sbjct: 85 AYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSV 144
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D + ++D
Sbjct: 145 GDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDD 204
Query: 174 SQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE +
Sbjct: 205 PTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEA- 263
Query: 233 DYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++ G A
Sbjct: 264 DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYA 323
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ ID + V V R ++ + V LTD+ ++ A ISSDG + + +
Sbjct: 271 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 330
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L +E + + LE R GL+ LEL DRVGLLSEV VL +
Sbjct: 331 HMDGCTLDNEGEKERVIKCLEAAI--RRRVSEGLS-LELCAKDRVGLLSEVTRVLREHGL 387
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV+D SG P++
Sbjct: 388 SVTRAGVSTVGEQAMNVFYVRDA-SGKPVD 416
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 204/300 (68%), Gaps = 19/300 (6%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EYE L +R+N PRV +DN C TL+KVDS + GILLE VQ+LTD++LLI K
Sbjct: 6 WPYFDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITK 65
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETIHYGRS--------NSF 113
AYISSDG +FMDVFHVTD GNK+TD +I YIE++L +TI ++ +S
Sbjct: 66 AYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSV 125
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TA+EL G DR GLLSE+ AVLADL +VV A+VWTHN RIA ++YV D + ++D
Sbjct: 126 GDHTAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDD 185
Query: 174 SQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++ +E +L+NVL+G ++D + A+ + SM TH +RRLHQM+FADRDYE +
Sbjct: 186 PTRLSVMEEQLKNVLRGCEDDDKVARTSFSMGFTHVDRRLHQMLFADRDYEGGGTTIEA- 244
Query: 233 DYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
DYP +T+ D+ YS V+V CKDR KL+FD+VCTLTDM+YVVFHA+I++ G A
Sbjct: 245 DYPPSFKPKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYA 304
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ ID + V V R ++ + V LTD+ ++ A ISSDG + + +
Sbjct: 252 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 311
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L +E + + LE R GL+ LEL DRVGLLSEV VL +
Sbjct: 312 HMDGCTLDNEGEKERVIKCLEAAI--RRRVSEGLS-LELCAKDRVGLLSEVTRVLREHGL 368
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YV+D SG P++
Sbjct: 369 SVTRAGVSTVGEQAMNVFYVRDA-SGKPVD 397
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/293 (52%), Positives = 196/293 (66%), Gaps = 31/293 (10%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
MN PRV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISSDG +FMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 80 HVTDLNGNKLTDESVIS----YIEQSLETIHYGRSNSF-------------NGLTALELT 122
VT+ +G+K+TDESV+ YI +S+ G + F + T +ELT
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPSSDHTLIELT 115
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D++++ RI+
Sbjct: 116 GTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKG 175
Query: 183 RLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER------MPVLRHSTDYP 235
RL NV +G + R AK V+ TH ERRLHQMMF DRDYER S P
Sbjct: 176 RLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGP 233
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
VV+V NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 234 VVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAY 286
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTD+ ++ + ++G +++ ++G + E+
Sbjct: 246 SVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHIDGCPVNSEAER 305
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
I Q LE R + GL LEL+ DRVGLLS+V + + +V A+V T
Sbjct: 306 KRIIQCLEAAIERRVS--EGL-KLELSTGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDE 362
Query: 156 IASLIYVKDCNSGSPIE 172
+ YV+D +GS +E
Sbjct: 363 AVNTFYVRDA-AGSAVE 378
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 201/293 (68%), Gaps = 19/293 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE+EKLVIRMN PRV +DN T T++KVDSA + G LLE VQVLTD+NL +++AYISS
Sbjct: 12 DEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TA 118
DG +FMDVFHVTD NG K + V I+QSL R++SF L T
Sbjct: 72 DGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGP----RASSFRSLRRSVGVQAEAEHTT 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTG DR GLLSEVFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G I+D ++
Sbjct: 128 IELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLA 187
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST---DYP 235
+I+ L VLKGD D +SA VS+ TH +RRLHQ+M+ADRDY+ ST +
Sbjct: 188 KIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKL 247
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+VTV + D+ Y+VVN++C DR KLLFD VCTLTDM+YVV+H T+ G AY
Sbjct: 248 LVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAY 300
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +D+ + T+V + R +L + V LTD+ ++ + ++G +++ +
Sbjct: 249 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 308
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ ++ E+ + LE R++ G+ LEL G DRVGLLS+V + + SV
Sbjct: 309 DGSPISSEAERQRVIHCLEAAVRRRTS--EGI-KLELCGEDRVGLLSDVTRIFRENGLSV 365
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIE 172
A+V T + ++ YV D SG+P++
Sbjct: 366 NRAEVTTRGSQAMNVFYVTDV-SGNPVK 392
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 201/304 (66%), Gaps = 17/304 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS--NSFNGL-- 116
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + + N++ G
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
T++E+ DR GLLSEV AVLADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G + D + A+ ++S+ TH +RRLHQM FADRDYE +
Sbjct: 181 RAVDDPERLSSMEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVT 240
Query: 227 VLRHSTD---YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L S P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERA 287
G A
Sbjct: 301 GSHA 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ +++ +++ V R ++ + V LTD+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 83 DLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G L E + LE IH S + +LEL DRVGLLSEV +L +
Sbjct: 312 HKDGCTLDTEGEKERXVKCLEAAIHRRVSEGW----SLELCAKDRVGLLSEVTRILREHG 367
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YVKD SG+P++
Sbjct: 368 LSVSRAGVTTVGEQAVNVFYVKDA-SGNPVD 397
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 201/304 (66%), Gaps = 17/304 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS--NSFNGL-- 116
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + + N++ G
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
T++E+ DR GLLSEV AVLADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G + D + A+ ++S+ TH +RRLHQM FADRDYE +
Sbjct: 181 RAVDDPERLSSMEEQLNNVLRGCEEQDEKFARTSLSIGSTHVDRRLHQMFFADRDYEAVT 240
Query: 227 VLRHSTD---YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L S P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDSASCGFEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERA 287
G A
Sbjct: 301 GSHA 304
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ +++ +++ V R ++ + V LTD+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 83 DLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
+G L E + + LE IH S + +LEL DRVGLLSEV +L +
Sbjct: 312 HKDGCTLDTEGEKERVVKCLEAAIHRRVSEGW----SLELCAKDRVGLLSEVTRILREHG 367
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A V T + ++ YVKD SG+P++
Sbjct: 368 LSVSRAGVTTVGEQAVNVFYVKDA-SGNPVD 397
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/282 (53%), Positives = 195/282 (69%), Gaps = 6/282 (2%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN+PRVVI+N VC AT+++VD+ R G LLE VQ L DLNL+I KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-----GRSNSFNGLTALELTGTDRV 127
+FM+VFHVTD GNK+ DE +++ IE++LET Y G+ T +ELTGTDR
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGKMLLSKEHTLVELTGTDRP 130
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
GLLSEV AVL DL C+VV A++W HN R A++I+V D ++G+ IED +Q+ I+ L NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 188 LKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
LKG D R+ +++S H RRLHQMMFA RD+ER ++ P VTV + DR
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSEDDNSVRPSVTVSDCPDRD 250
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
Y+VV DR KLLFD VCTLTDM+Y+VFH T+NT+ + AY
Sbjct: 251 YTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAY 292
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTA--TLVKVDSARRHGILLEAVQVLTDL 59
+D E P D+ N+ R + + CP T+V S R +L + V LTD+
Sbjct: 224 RDFERPLSEDD--------NSVRPSVTVSDCPDRDYTVVTATSIDRPKLLFDTVCTLTDM 275
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDES----VISYIEQSLETIHYGRSNSFNG 115
L+ +++ +++ ++G ++ E+ V+ I+ ++E + G
Sbjct: 276 QYLVFHGTVNTSSDEAYQEYYIRHVDGLPVSSEAERQRVMECIQAAIE------RRATEG 329
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS- 174
L LEL D GL+S++ +L + A++ T NG+ V D SG+P+E
Sbjct: 330 L-HLELFTDDHFGLISDITRILRENGLCPKRAEISTKNGKAKHNFIVTDV-SGNPVEPKT 387
Query: 175 -----QQIDRIEARLRNVLKGDNDIRSAK 198
QQ+ + +++ K ++I A+
Sbjct: 388 IYLIRQQMGQTVIQVKGNFKYVSEISPAE 416
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/293 (52%), Positives = 205/293 (69%), Gaps = 17/293 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVLTD+NL+I KAYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------TALEL 121
DG +FMDVF+V D +G K+ D+ V+ YI++ LE+ + + S G TA+EL
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLES-NASFAPSLRGSVGVMPSEEHTAIEL 121
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVL DL C+VV A++WTHN R A++++V D ++G I+D +++ I
Sbjct: 122 TGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIR 181
Query: 182 ARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER-----MPVLRHSTDYP 235
L NVLKG++D ++A T+S VT ERRLHQ+MFADRDYER + + P
Sbjct: 182 ELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRP 241
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
VTV N +R Y+VV+++ KDR KLLFD+VCTLTDMEYVVFH ++T AY
Sbjct: 242 HVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAY 293
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R +L + V LTD+ ++ +S+ F++ ++G ++ ++
Sbjct: 253 TVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDAER 312
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ GL LEL DRVGLLS++ + + + A++ T G+
Sbjct: 313 ERVVQCLEAAIERRAS--EGL-ELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGK 369
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRI 180
YV D +G+P+ D + ID I
Sbjct: 370 AKDTFYVTDV-TGNPV-DPKIIDSI 392
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/324 (49%), Positives = 207/324 (63%), Gaps = 46/324 (14%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+IKKAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQ------------SLETIHYGRS---NSFNG 115
DG +FMDVF+VTD NGNK+ D+ VI YI++ L I+ RS F
Sbjct: 63 DGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDFTV 122
Query: 116 L--------------------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
L T +ELTGTDR GLLSE+ AVLADL+C+VV A++
Sbjct: 123 LYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTAEI 182
Query: 150 WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM-AVTHT 208
WTHN R A++++V D +SG IED ++ I L NVL+G +D ++AK +S VT+
Sbjct: 183 WTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVTYR 242
Query: 209 ERRLHQMMFADRDYERMPVL----RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDV 264
+RRLHQ+MFADRDYER+ R +P VTV + +R Y+VV ++ KDR KLLFD+
Sbjct: 243 DRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLFDI 302
Query: 265 VCTLTDMEYVVFHATINTAGERAY 288
VCTLTDM+YVVFH + T AY
Sbjct: 303 VCTLTDMQYVVFHGVVQTERTGAY 326
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + + T+V + + R +L + V LTD+ ++ + ++ F++
Sbjct: 273 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 332
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + Q LE R++ G+ LEL DRVGLLS++ + +
Sbjct: 333 HVDGFPISSEAERERLIQCLEAAIERRAS--EGM-ELELCTEDRVGLLSDITRIFRENSL 389
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ A++ T NG+ YV D +G+P+ D + ID I ++
Sbjct: 390 CIKRAEISTENGKAKDTFYVTDV-TGNPV-DPKSIDSIRRQI 429
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R G+L + ++ + +L IK+A IS++ D F+VTD+ GN + +S+ S Q +T
Sbjct: 373 RVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDT 432
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
+ + NS L+ GT +G L F
Sbjct: 433 VLQVKHNS--SLSPKPPQGTT-IGFLFGSF 459
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 199/304 (65%), Gaps = 17/304 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE L R+N P V IDN C TLVKVDS + GILLE VQVLTDL+
Sbjct: 1 MAKVYWPYFDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS--NSFNGL-- 116
L I KAYISSDG +FMDVFHVTD GNK+TD I YIE+ L + + N++ G
Sbjct: 61 LTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRV 120
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
T++E+ DR GLLSEV A+LADL +VV A+ WTHN RIA ++YV D +
Sbjct: 121 GVHSLGDHTSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATS 180
Query: 169 SPIEDSQQIDRIEARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++D +++ +E +L NVL+G D + A+ ++S+ TH +RRLHQM FAD+DYE +
Sbjct: 181 RAVDDPERLSAMEEQLNNVLRGCEQEDEKFARTSLSIGSTHVDRRLHQMFFADKDYEAVT 240
Query: 227 VLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
L P +TV++ ++ YSV+NV C+DR KL+FD+VCTLTDM+Y+VFHATI+++
Sbjct: 241 KLDDFASRGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSS 300
Query: 284 GERA 287
G A
Sbjct: 301 GSHA 304
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
KD E LD++ R P++ +++ +++ V R ++ + V LTD+
Sbjct: 234 KDYEAVTKLDDFAS---RGLEPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQY 290
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL---TDESVISYIEQSLETIHYGRSNSFNGLTA 118
++ A ISS G + + +G L E V+ +E + IH S + +
Sbjct: 291 IVFHATISSSGSHASQEYFIRHKDGCTLDTGEKERVVKCLEAA---IHRRVSEGW----S 343
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL DRVGLLSEV +L + SV A V T + ++ YVKD SG+P++
Sbjct: 344 LELCAKDRVGLLSEVTRILREHGLSVSRAGVTTVGEQAVNVFYVKDA-SGNPVD 396
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 196/282 (69%), Gaps = 6/282 (2%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN+PRVVI+N C AT++++D+ R G LLE VQVLTDLNL+I KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-----GRSNSFNGLTALELTGTDRV 127
+FM+VFHVTD +GNK+ DE +++ I+++LET Y G+ T +ELTGTDR
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGKMLLSKEHTLIELTGTDRP 130
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
GLLSEV AVL DL C+VV A+VW HN R A++I++ D ++G+ IED +Q+ I+ L NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 188 LKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
LKG D R+ +++S H RRLHQMMFA RD+ER + P VTV + DR+
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVSVDDIRVRPYVTVSDCPDRN 250
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
Y+VV + DR KLLFD VCTLTDM+Y+VFH T+ T + AY
Sbjct: 251 YTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAY 292
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCP--TATLVKVDSARRHGILLEAVQVLTDL 59
+D E P +D+ IR+ P V + + CP T+V S R +L + V LTD+
Sbjct: 224 RDFERPVSVDD-----IRVR-PYVTVSD--CPDRNYTVVTARSVDRPKLLFDTVCTLTDM 275
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTAL 119
L+ + +D +++ +G ++ E+ ++ +E I + L
Sbjct: 276 QYLVFHGTVITDSDEAYQEYYIRHADGLPMSSEA---ERQRVMECIQAAIERRVSEGLQL 332
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
EL D GLLS++ +L + AK+ T NG+ V D SG+P+E
Sbjct: 333 ELFTDDHFGLLSDITRILRENGLCPKRAKISTKNGKARHNFIVTDV-SGNPVE 384
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/299 (51%), Positives = 194/299 (64%), Gaps = 24/299 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE++KLVI MN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 12 VDEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYIS 71
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------- 116
SDG +FMDVFHV D GNKL D VI IEQSL S SF G
Sbjct: 72 SDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGA----GSLSFRGTDRCVGVEAEAEAA 127
Query: 117 -TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +EL G DR GLLSEVFAVL +L+C++ ++VWTH+GR+A+L+YV D +G IE+ +
Sbjct: 128 QTVIELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPE 187
Query: 176 QIDRIEARLRNVLKG---DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
++D ++ LR+VL+G D A ++ A H +RRLHQMM ADR R
Sbjct: 188 RLDTVKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVA 247
Query: 233 ---DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+Y+VFH T+ G AY
Sbjct: 248 DDRSLPVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAY 306
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VV+++ TLV V R +L + V LTD+ L+ + ++G +++
Sbjct: 253 PVVVVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQEYYIR 312
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
L+ + + + LE R+ GL EL DRVGLLS+V + +
Sbjct: 313 HLDDGAAASDEDREQLRRCLEAAIQRRNTEGLGL---ELCCEDRVGLLSDVTRIFREHGL 369
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
SV A+V T R A++ YV SG P++ +Q ++ + A +
Sbjct: 370 SVTHAEVATRGERAANVFYVVTA-SGMPVQ-AQAVEAVRAEI 409
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/295 (52%), Positives = 205/295 (69%), Gaps = 19/295 (6%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVLTD+NL+I KAYISS
Sbjct: 3 EEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIE--QSLETIHYGRSNSFNGL---------TAL 119
DG +FMDVF+V D +G K+ D+ V+ YI+ + LE+ + + S G TA+
Sbjct: 63 DGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLES-NASFAPSLRGSVGVMPSEEHTAI 121
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
ELTGTDR GLLSEV AVL DL C+VV A++WTHN R A++++V D ++G I+D +++
Sbjct: 122 ELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLST 181
Query: 180 IEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER-----MPVLRHSTD 233
I L NVLKG++D ++A T+S VT ERRLHQ+MFADRDYER + +
Sbjct: 182 IRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSS 241
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV N +R Y+VV+++ KDR KLLFD+VCTLTDMEYVVFH ++T AY
Sbjct: 242 RPHVTVLN-IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAY 295
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 5/145 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R +L + V LTD+ ++ +S+ F++ ++G ++ ++
Sbjct: 255 TVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDAER 314
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ GL LEL DRVGLLS++ + + + A++ T G+
Sbjct: 315 ERVVQCLEAAIERRAS--EGL-ELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGK 371
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRI 180
YV D +G+P+ D + ID I
Sbjct: 372 AKDTFYVTDV-TGNPV-DPKIIDSI 394
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/299 (50%), Positives = 200/299 (66%), Gaps = 26/299 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF-------------NGLT 117
DG +FMDVF+V D GNK+ D+ VI YI++ LE + SF T
Sbjct: 63 DGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLEN-----NPSFVPSLRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DL C+VV A++WTHN R A++++V D +SG I+D ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVL-------R 229
I L NVL+G ND ++A+ T+S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERAGQEELRDR 237
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV + ++ Y+VV ++ +DR KLLFD+VCTLTDM+YVVFH + T A+
Sbjct: 238 DKRPLPHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAF 296
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + + V T+V + + R +L + V LTD+ ++ + + F++
Sbjct: 243 PHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIR 302
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + Q LE R++ GL EL DRVGLLS++ +
Sbjct: 303 HVDGFPISSEAERERLMQCLEAAIERRASEGMGL---ELCTEDRVGLLSDITRTFRENSL 359
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ A++ T G+ YV D +G+P+ D + ID I ++
Sbjct: 360 CIKRAEISTEEGKARDTFYVTDV-TGNPV-DPKIIDSIRRQI 399
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/293 (51%), Positives = 199/293 (67%), Gaps = 15/293 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYITS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA----- 118
DG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNV 135
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D ++ + D+++++
Sbjct: 136 IELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERLE 195
Query: 179 RIEARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYERMPVLRHS-TDYP 235
RI +L +L+G N R A M VS A THTERRLHQMM D DYE++ L + P
Sbjct: 196 RIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLAPGQSQRP 255
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
VTV+NW D+ YSVV ++CKDR KLLFD VCTLTD++YVVFHA I+ +AY
Sbjct: 256 NVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAY 308
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL ++ A I + F+V
Sbjct: 255 PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 314
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + LEL D+VGLLSEV + +
Sbjct: 315 HVNGSPMNTETERLRVIQCLEAAIERRVSEG---VKLELCTNDKVGLLSEVTRIFRENSL 371
Query: 143 SVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQ--IDRIEARLRNVL--KGDNDIRSA 197
+V A+V T GR+A + YV+ GS ED Q ID I + + L KG + + A
Sbjct: 372 TVTRAEV-TTRGRMAVNTFYVR----GSTGEDVDQKAIDSIRQAIGHSLQVKGQPEPQEA 426
Query: 198 K 198
+
Sbjct: 427 Q 427
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 202/299 (67%), Gaps = 26/299 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN C AT+++VDS +HGILL+ VQV++D+NL+I KAYISS
Sbjct: 3 DEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-------GL------T 117
D +FMDVF+V D NGNK+ D+ VI YI++ LE + SF G+ T
Sbjct: 63 DAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLEN-----NPSFAPSLRESVGVVPTEEHT 117
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DL C+VV A++WTHN R A++++V D +SG I+D ++
Sbjct: 118 VIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRL 177
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVL-------R 229
I L NVL+G ND ++A+ T+S VT+ +RRLHQ+MFADRDYER+ R
Sbjct: 178 STIRDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDR 237
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV + ++ Y+VV ++ +DR KLLFD+VCTLTDM+YVVFH + T A+
Sbjct: 238 DKRPLPHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAF 296
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + + V T+V + + R +L + V LTD+ ++ + + F++
Sbjct: 243 PHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFYIR 302
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G ++ E+ + Q LE R++ G+ LEL DRVGLLS++ + +
Sbjct: 303 HVDGFPISSEAERERLVQCLEAAIERRASE--GM-ELELCTEDRVGLLSDITRIFRENSL 359
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ A++ T G+ YV D +G+P+ D + ID I ++
Sbjct: 360 CIKRAEISTEEGKARDTFYVTDV-TGNPV-DPKIIDSIRRQI 399
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 201/307 (65%), Gaps = 25/307 (8%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE RMN PRV +DNA C TL+KVDS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---- 116
+I KAYISSDG +FMDVFHVTD G K+TD I +IE++L +S S G+
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGP----KSQSTEGVKNWP 116
Query: 117 ------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D
Sbjct: 117 SKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND 176
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ + ++++ ++ +E +L N+L+G + + A+ + SM TH +RRLHQM+FADRDYE
Sbjct: 177 ATNQA-VDEANRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYES 235
Query: 225 MPVLRH----STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
V R + P +T++ ++ YSVV+V+CKDR KL+FD+VCTLTDM+YVVFHAT+
Sbjct: 236 YAVAREVDSPPSLRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATV 295
Query: 281 NTAGERA 287
++ G A
Sbjct: 296 SSDGPYA 302
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ I+ ++V V R ++ + V LTD+ ++ A +SSDG + + + +
Sbjct: 250 PKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 83 DLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
++G L E VI IE ++ R G++ LEL DRVGLLSEV +L
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEAAI------RRRVSEGVS-LELCAKDRVGLLSEVTRILR 362
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+ +V A V T + ++ YV+D SG+P++
Sbjct: 363 ENGLTVCRAGVSTRGEQALNVFYVRDA-SGNPVD 395
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/298 (50%), Positives = 204/298 (68%), Gaps = 25/298 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN P +V+DN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSL-----------ETIHYGRSNSFNG 115
DG +FMDVF++TD G KL D++ ++ YI +SL ++ S + N
Sbjct: 75 DGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA+L+C+VV A++WTHN R A+++ V D ++G + D++
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTE 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI+ RL +L+G N R A M VS + THTERRLHQMM D D E++ RH+++
Sbjct: 192 RLERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQ--RHASN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV+NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY
Sbjct: 250 QSQRPNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAY 307
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL+ ++ A I ++ F+V
Sbjct: 254 PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEFYVR 313
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + G+ LEL D+VGLLSEV + +
Sbjct: 314 HVNGSPMNTEAERLRVVQCLEAAIERR--VWEGM-KLELCTNDKVGLLSEVTRIFRENSL 370
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+V A+V T + YV C S D + ID I +
Sbjct: 371 TVTRAEVSTRGRTAVNTFYV--CGSAGEAVDQKTIDSIRQEI 410
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 145/284 (51%), Positives = 199/284 (70%), Gaps = 6/284 (2%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
D Y KL+ R+N+PRVV+DN C AT+++VD+ +R G LLE VQVLTDLNL++ KAY+SS
Sbjct: 3 DAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMSS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSNSFNGLTALELTGTD 125
DG +FM+VF+VTD +GNK+ DE +++ IE++LET G+ T +ELTGTD
Sbjct: 63 DGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACMVKSTGKMLPSKEHTLIELTGTD 122
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEV AVL DL+C+VV A++W HNGR A++I++ D ++G+ IED +++ I+ L
Sbjct: 123 RPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIKELLY 182
Query: 186 NVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
NVLKG D R+ +++S H RRLHQMMFA RD+ER ++ P VTV + D
Sbjct: 183 NVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERPGSENDNSVRPYVTVFDCPD 242
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
R Y+VV DR KL+FD VCTLTDM+Y+VFH T+ T ++AY
Sbjct: 243 RDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAY 286
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 32 CPTA--TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
CP T+V S R ++ + V LTD+ L+ + +D + +++ ++G
Sbjct: 240 CPDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHVDGFPT 299
Query: 90 TDES----VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVV 145
+ E+ VI I+ ++E + GL LEL D GLLS + +L +
Sbjct: 300 SSEAERQRVIECIQAAIE------RRASEGL-PLELFTDDHFGLLSYITRILRENGLWPK 352
Query: 146 EAKVWTHNGRIASLIYVKDCNSGSPIE 172
A++ T NG+ V D SG+P++
Sbjct: 353 SAEISTRNGKAKHSYIVTDV-SGNPVD 378
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/289 (52%), Positives = 193/289 (66%), Gaps = 31/289 (10%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN CP AT++ VDSA ++GILLE VQVLTDL L++KKAYISSDG +FMDVF VT+
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 84 LNGNKLTDESVIS----YIEQSLETIHYGRSNSF-------------NGLTALELTGTDR 126
+G+K+TDESV+ YI +S+ G + F + T +ELTGTDR
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSI-----GPDSCFLPSRRRAVGVEPSSDHTLIELTGTDR 126
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVL L+C+VV A++WTHNGR A+++ V D SG + D++++ RI+ RL N
Sbjct: 127 PGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYN 186
Query: 187 VLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYER------MPVLRHSTDYPVVTV 239
V +G + R AK V+ TH ERRLHQMMF DRDYER S PVV+V
Sbjct: 187 VFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPVVSV 244
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
NW + YSVV V+C+DR KLLFD VCTLTDM+YVVFH +++T G AY
Sbjct: 245 VNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAY 293
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N + ++V V R +L + V LTD+ ++ + ++G +++
Sbjct: 240 PVVSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIR 299
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G + E+ I Q LE R + GL LEL+ DRVGLLS+V + +
Sbjct: 300 HIDGCPVNSEAERKRIIQCLEAAIERRVS--EGL-KLELSTGDRVGLLSDVTRIFRENGL 356
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A+V T + YV+D +GS +E
Sbjct: 357 TVTRAEVSTRGDEAVNTFYVRDA-AGSAVE 385
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/292 (50%), Positives = 195/292 (66%), Gaps = 21/292 (7%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR++G+LLEAV L+D + ++K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHY------------GRSNSFNGLTA 118
GR+FMDVFHVTD G K+ D + +++ +E SL GL+
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
LEL G DR GLLSEVFAVL DL+CS+V+AK WTH GR+A+L++V+D ++G+PI+D+ +
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
RIE+RLR VL+G + + AV + +RRLHQ++ DR+ + P + D P T
Sbjct: 190 RIESRLRYVLRGGARGARTILVDAAAVGNLDRRLHQLLNEDREADGRP----AADRPTTT 245
Query: 239 ---VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VQ W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 246 AVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 297
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ L+G ++ +
Sbjct: 258 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGQPISSAAER 317
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q L+ R++ LEL+ DR GLL+ V V + SV A++ T +
Sbjct: 318 QRVIQRLQAAIERRASEG---VRLELSIKDRRGLLAYVTRVFRENSLSVTHAEITTRGDK 374
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRI 180
++ +V D +G P D + ID +
Sbjct: 375 ALNVFHVTDV-AGRPA-DPKAIDEV 397
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 200/305 (65%), Gaps = 19/305 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE R+N PRV +DN C TL+K DS + GILLE VQ+LTDL+
Sbjct: 1 MTKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-------QSLETIHYGRS--- 110
+I KAYISSDG +FMDVFHVTD G K+TD I +IE QS E + +
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S T +EL G DR GLLSE+ AVLA LQ +V+ A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSIGDHTVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDA-TN 179
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++DS+++ IE +L ++L+G ++D + A+ + SM +TH +RRLHQM+FADRDYE V
Sbjct: 180 QAMDDSKRLSIIEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGV 239
Query: 228 LRHSTDYPV-----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P + ++ ++ YSVV+V+CKDR KL+FD+VCTLTDMEYVVFHATI++
Sbjct: 240 TTTDVDCPPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISS 299
Query: 283 AGERA 287
G+ A
Sbjct: 300 EGQYA 304
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D++ P C P + I+ V ++V V R ++ + V LTD+ +
Sbjct: 243 DVDCPPCF-----------RPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYV 291
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A ISS+G++ + + ++G L E E++++ I + +LEL
Sbjct: 292 VFHATISSEGQYASQEYFIRHMDGCTLDTEG---EKERAIKCIEAAIQRRVSEGVSLELC 348
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
DRVGLLSEV +L + +V A V T + ++ YV+D SG+P++
Sbjct: 349 AKDRVGLLSEVTRILRENGLTVSRAGVSTVGEKGLNVFYVRDA-SGNPVD 397
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 198/304 (65%), Gaps = 19/304 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE RMN PRV +DNA C TL+K+DS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHY 107
+I KAYISSDG +FMDVFHVTD G K+TD I IE++L + H
Sbjct: 61 FVITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHV 120
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
G +S TA+EL G DR GLLSE+ AVLA+L +V A+VWTHN RIA ++YV D +
Sbjct: 121 G-VHSVGDYTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDA-T 178
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
+D +++ +E +L N+L+G + + A+ + SM TH +RRLHQM+FADRDYE V
Sbjct: 179 NQVADDPKRLSLMEEQLNNILRGCDGEKVARTSFSMGSTHMDRRLHQMLFADRDYESYAV 238
Query: 228 LRH----STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R + P +T++ ++ YSVV+V+CKDR KL+FD+VCTLTDM+YVVFHAT+++
Sbjct: 239 AREVDSPPSLRPRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSD 298
Query: 284 GERA 287
G A
Sbjct: 299 GPYA 302
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR+ I+ ++V V R ++ + V LTD+ ++ A +SSDG + + + +
Sbjct: 250 PRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 83 DLNGNKL----TDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
++G L E VI IE ++ R G++ LEL DRVGLLSEV +L
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEAAI------RRRVSEGVS-LELCAKDRVGLLSEVTRILR 362
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+ SV A V T + ++ YV+D SG+P++
Sbjct: 363 ENGLSVCRAGVSTRGEQALNVFYVRDA-SGNPVD 395
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 145/291 (49%), Positives = 197/291 (67%), Gaps = 13/291 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAYI+S
Sbjct: 16 DEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA----- 118
DG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 76 DGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNI 135
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+ELTGTDR GLLSEV AVL L+C+VV A++WTHN R A+++ V D ++G + D+++++
Sbjct: 136 IELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLE 195
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRHSTDYPVV 237
RI +L + +G N R A ++ A THTERRLHQMM D DYE++ + P V
Sbjct: 196 RIREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQRPNV 255
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
TV+NW D+ YSVV ++CKDR+KLLFD VCTLTD++YVVFHA I+ +AY
Sbjct: 256 TVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAY 306
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL ++ A I + F+V
Sbjct: 253 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 312
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + LEL D+VGLLSEV + +
Sbjct: 313 HVNGSPMNTETERLRVIQCLEAAIERRVSEG---VKLELCTNDKVGLLSEVTRIFRENSL 369
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+V A+V T GR+A + ++G + D + ID I + + L+
Sbjct: 370 TVTRAEV-TTRGRMAVNTFYVRGSAGEAV-DQKAIDSIREAIGHSLQ 414
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 198/287 (68%), Gaps = 10/287 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSN----SFNGLTALEL 121
DG +FMDVF V D +GNK+ D V+ YI++ +E+ I RS+ + T++EL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIEL 123
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVL DL C+VV A++WTHN R A++I+V D ++ S I D ++ I+
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTIK 183
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L NV++ ++ R+AK S + TH ERRLHQ+MF DRDYE + R S P VT+ N
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRARTSASRPSVTLMN 243
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
++ Y+VV ++ KDR KL+FDVVCTLTDM+YVVFH ++T AY
Sbjct: 244 -IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAY 289
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R ++ + V LTD+ ++ +S++ F++ ++G + E+
Sbjct: 249 TVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQ 308
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ GL LEL+ DRVGLLS++ + ++V A++ T G+
Sbjct: 309 ERVIQCLEAAIERRAS--EGL-ELELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGK 365
Query: 156 IASLIYVKDCNSGSPIE 172
YV D +G+P+E
Sbjct: 366 AKDTFYVTDV-TGNPVE 381
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 199/304 (65%), Gaps = 20/304 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ P +YE L+ R++ PRV IDN C TLVKVDSA +HGILLE VQVLTDL
Sbjct: 1 MENFYKPYFDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLE 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL--- 116
L+I K+YI SDG +FMDVFHVTD GNKLTDES+I YI+Q+L G S
Sbjct: 61 LVISKSYICSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGR 120
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
TA E+TGTDR GL+SE+ AVLA+L C V A WTHN R+A +I ++D
Sbjct: 121 EMNPRHVSTEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDE 180
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKG---DNDIRSAKMTVSMAV-THTERRLHQMMFADRD 221
G PI D +++ +E +L NV++ + R ++T +A THT+RRLHQ+MFAD+D
Sbjct: 181 LKGGPIRDPERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKD 240
Query: 222 YER-MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
YER S+D V+++N ++ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +
Sbjct: 241 YERCCGGCDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAV 300
Query: 281 NTAG 284
++ G
Sbjct: 301 SSKG 304
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V I+N ++V V S R +L + V LTD+ ++ A +SS G + + +
Sbjct: 256 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 315
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
++G L +S + + Q L I +GL L++ +R+GLLS++ V + S
Sbjct: 316 MDGCTLGTQSERNRVAQCL--IAAIERRVTHGLR-LDIRIKNRLGLLSDITRVFRENGLS 372
Query: 144 VVEAKVWTHNGRIASLIYVKD 164
+ A++ H R + YV D
Sbjct: 373 IRMAEIGIHGERASGSFYVTD 393
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/298 (50%), Positives = 194/298 (65%), Gaps = 25/298 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+ IDN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS---------------YIEQSLETIHYGRSNSFNG 115
DG + MDVF++TD G KL D++ I+ YI ++ S+ N
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D +GS + D+
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDAD 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI RL +L+G N R A M VS THTERRLHQMM D D+E++ RH +
Sbjct: 192 RLERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQL--HRHPPN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY
Sbjct: 250 QSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAY 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL+ ++ A I + F+V
Sbjct: 254 PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVR 313
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + LEL D+VGLLSEV + +
Sbjct: 314 HVNGSPMHTEADRLRVIQCLEAAIERRVSEG---VKLELCTNDKVGLLSEVTRIFRENSL 370
Query: 143 SVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQIDRI 180
+V A+V T GR+A + YV+D G+ D + ID I
Sbjct: 371 TVTRAEVSTR-GRMAVNTFYVRDSTGGTV--DQKTIDSI 406
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 185/269 (68%), Gaps = 12/269 (4%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD 91
C AT+++VDSA +GILLE VQ+LTDLNL I KAYISSDG +FMDVF+VTD +GNK+TD
Sbjct: 4 CKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTD 63
Query: 92 ESVISYIEQSL-ETIHYGRSNSFNGL------TALELTGTDRVGLLSEVFAVLADLQCSV 144
E V+ YI++SL + S G+ T +ELTG DR GLLSE+ AVL L+CSV
Sbjct: 64 EVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLKCSV 123
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
+ A++WTHN R A+++ V D +G I D +++ RI+ LRNVLKG N R AK VS
Sbjct: 124 LNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVVSHG 183
Query: 205 VTHTERRLHQMMFADRDYERMPV-----LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
HT+RRLHQMMF DRDYE V ++ P V V NW D+ YSVV V+CKDR K
Sbjct: 184 EVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPK 243
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERAY 288
LLFD VCTLTDM+YVVFH +++T G A+
Sbjct: 244 LLFDTVCTLTDMQYVVFHGSVDTEGTEAF 272
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN + ++V V R +L + V LTD+ ++ + ++G ++V
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + E+ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEAAIKRRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 335
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL-RNVLKGDND 193
+V A+V T G+ + YV D SG I D++ ID I + + +LK N+
Sbjct: 336 TVTRAEVKTKGGKALNTFYVSDA-SGYSI-DAKTIDSIRQTIGQTILKVKNN 385
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 197/287 (68%), Gaps = 10/287 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----IHYGRSN----SFNGLTALEL 121
DG +FMDVF V D +GNK+ D V+ YI++ +E+ I RS+ + TA+EL
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIEL 123
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVL DL C+VV A++WTHN R A++I+V D + S I D ++ I+
Sbjct: 124 AGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTIK 183
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
L NV++ ++ R+AK S + TH ERRLHQ+MF DRDYE + + S P VT+ N
Sbjct: 184 ELLCNVVRTNSGSRAAKTVFSCSDTHRERRLHQIMFDDRDYEGVKRAKTSASRPSVTLMN 243
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
++ Y+VV ++ KDR KL+FDVVCTLTDM+YVVFH ++T AY
Sbjct: 244 -IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAY 289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R ++ + V LTD+ ++ +S++ F++ ++G + E+
Sbjct: 249 TVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQ 308
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ GL LEL+ DRVGLLS++ + ++V A++ T G+
Sbjct: 309 ERVIQCLEAAIERRAS--EGL-ELELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGK 365
Query: 156 IASLIYVKDCNSGSPIE 172
YV D +G+P+E
Sbjct: 366 AKDTFYVTDV-TGNPVE 381
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 194/281 (69%), Gaps = 10/281 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 189
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 190 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 245
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 246 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 286
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/290 (50%), Positives = 198/290 (68%), Gaps = 11/290 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY+KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVL D+NL+I KAYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------TALELTGT 124
DG +FMDVF+V GNK+ D+ VI+ I+ LE G+ T++EL+GT
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGT 122
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVLADL C+VV A VWTHN R A++++V D +G I D Q++ I+ L
Sbjct: 123 DRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELL 182
Query: 185 RNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVLRHSTD----YPVVTV 239
NVL+G+ +++ AKMT+S VT T+RRLHQ+M ADRDYER + + P VTV
Sbjct: 183 CNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTV 242
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYL 289
+ ++ Y+++ + +DR KLLFDV+CTLTDMEYVVFH + T A+L
Sbjct: 243 FDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFL 292
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF--FMDVFH 80
P V + + TL+ + R +L + + LTD+ ++ + + GR F++ F+
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVET-GRMEAFLE-FY 295
Query: 81 VTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ +G ++ ++ + LE R + GL LEL DRVGLLS++ + +
Sbjct: 296 IRHKDGLPISSKAERDRVLHCLEAAIERRESE--GL-KLELCAEDRVGLLSDITRIFREN 352
Query: 141 QCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+ A++ T G+ + YV D +G+ I D++ ++ I ++ + +
Sbjct: 353 SLCIRRAEIATKRGKAKDIFYVTDM-TGTTI-DAKVVESIRKQIGDAM 398
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/305 (51%), Positives = 194/305 (63%), Gaps = 30/305 (9%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATL+KVDSA ++G LLE VQVLTDL L IK+AYIS
Sbjct: 13 VDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYIS 72
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 73 SDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGA----GSLSFRGPPERAVAVEAEAEE 128
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ IED
Sbjct: 129 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDP 188
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRD---------YE 223
++D LR+VL+G + + A A H RRLHQMM ADR
Sbjct: 189 ARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEG 248
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 249 DGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAE 308
Query: 284 GERAY 288
G AY
Sbjct: 309 GSEAY 313
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ TLV V R +L + V LTD+ ++ + ++G +++
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
L+ + + + LE R GL LEL DRVGLLS+V V +
Sbjct: 320 HLDDRAASSGEERERLRRGLEAAIQRRYT--EGLR-LELCCEDRVGLLSDVTRVFREHGL 376
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSP 170
SV A+V T R A++ YV D +SG P
Sbjct: 377 SVTHAEVGTRGARAANVFYVVDASSGEP 404
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 196/310 (63%), Gaps = 35/310 (11%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 14 VDEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYIS 73
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 74 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGA----GSLSFRGPPERLVAVEAEAEE 129
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ I+D
Sbjct: 130 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDP 189
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRDYERMPVLR--- 229
++D ++ LR+VL+G + + A + H RRLHQMM ADR R
Sbjct: 190 ARLDTVKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDG 249
Query: 230 -----------HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
+ PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH
Sbjct: 250 EEERERGEASGNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHG 309
Query: 279 TINTAGERAY 288
T+ G AY
Sbjct: 310 TVIAEGSEAY 319
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
P V +++ TLV V R +L + V LTD+ ++ + ++G ++
Sbjct: 264 GVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYY 323
Query: 81 VTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ L+ + D + + LE R GL LEL DRVGLLS+V + +
Sbjct: 324 IRHLDDSSGEDRDRLC---RGLEAAIQRRCT--EGLR-LELCCEDRVGLLSDVTRIFREH 377
Query: 141 QCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
SV A+V T R A++ YV D SG P++ +D + A +
Sbjct: 378 GLSVTHAEVETRGARAANVFYVVDA-SGEPVQAQAAVDAVRAEI 420
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 193/298 (64%), Gaps = 25/298 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+ + +MN PR+ IDN C AT+V+VDSA +GILLE +QVL DLNL+I KAYI+S
Sbjct: 15 DEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYITS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVIS---------------YIEQSLETIHYGRSNSFNG 115
DG + MDVF++TD G KL D++ I+ YI ++ S+ N
Sbjct: 75 DGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN- 133
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVLA L+C+VV A++WTHN R A+++ V D +GS + D+
Sbjct: 134 --VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDAD 191
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHSTD 233
+++RI RL +L+G N R M VS THTERRLHQMM D D+E++ RH +
Sbjct: 192 RLERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQL--HRHPPN 249
Query: 234 Y---PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV NW D+ YSVV ++CKDR KLLFD VCTLTD+ YVVFHA I+ +AY
Sbjct: 250 QSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAY 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL+ ++ A I + F+V
Sbjct: 254 PNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVR 313
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + LEL D+VGLLSEV + +
Sbjct: 314 HVNGSPMHTEADRLRVIQCLEAAIERRVSEG---VKLELCTNDKVGLLSEVTRIFRENSL 370
Query: 143 SVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQIDRI 180
+V A+V T GR+A + YV+D G+ D + ID I
Sbjct: 371 TVTRAEVSTR-GRMAVNTFYVRDSTGGTV--DQKTIDSI 406
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 202/305 (66%), Gaps = 19/305 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + WP EYE R+N PRV +DN C TL+K DS + GILLE VQ+LTDL+
Sbjct: 1 MAKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE-------QSLETIHYGRS--- 110
+I KAYISSDG +FMDVFHVTD G K+TD I +IE QS E ++ +
Sbjct: 61 FIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRV 120
Query: 111 --NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+S TA+EL G DR GLLSE+ AVLA LQ +V+ A+VWTHN RIA ++YV D +
Sbjct: 121 GVHSIGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDA-TN 179
Query: 169 SPIEDSQQIDRIEARLRNVLKG-DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++DS+++ +E +L ++L+G ++D + A+ + +M TH +RRLHQM+FADRDYE + +
Sbjct: 180 QAMDDSKRLSIMEEQLNHILRGCEDDEKVARTSFTMGFTHMDRRLHQMLFADRDYESVGL 239
Query: 228 LRHSTD-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P + ++ ++ YSVV+V+CKDR KL+FD+VCTLTDMEYVVFHATI++
Sbjct: 240 TTTDVDCPPSFRPKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISS 299
Query: 283 AGERA 287
G+ A
Sbjct: 300 EGQYA 304
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ I+ V ++V V R ++ + V LTD+ ++ A ISS+G++ + +
Sbjct: 252 PKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIR 311
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E E+ ++ I + +LEL DRVGLLSEV +L +
Sbjct: 312 HMDGCTLDTEG---EKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGL 368
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
V A V T + ++ YV+D SG+P++
Sbjct: 369 RVSRAGVSTVGEKGLNVFYVRDA-SGNPVD 397
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 194/281 (69%), Gaps = 10/281 (3%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 189
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 190 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 245
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 246 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 286
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ +G ++ E+
Sbjct: 247 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 306
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ + L+ R++ LEL +DR GLL+ V V + SV A++ T +
Sbjct: 307 QHVIRCLQAAIERRASEG---VRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDM 363
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ +V D +G P D + ID + R+
Sbjct: 364 AMNVFHVTDV-AGRPA-DPKTIDEVIQRI 390
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/305 (51%), Positives = 194/305 (63%), Gaps = 30/305 (9%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DEYEKLV+RMN PRV +DN TATL+KVDSA ++G LLE VQVLTDL L IK+AYIS
Sbjct: 13 VDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYIS 72
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------------- 115
SDG +FMDVFHV D +GNKL D VI IEQSL S SF G
Sbjct: 73 SDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGA----GSLSFRGPPERAVAVEAEAEE 128
Query: 116 -LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
T +EL G DR GLLSEVFAVLADL+C+VV ++VWTH+GR+A+L++V D ++ IED
Sbjct: 129 AQTTIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDP 188
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT--HTERRLHQMMFADRD---------YE 223
++D LR+VL+G + + A A + RRLHQMM ADR
Sbjct: 189 ARLDTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEG 248
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R PVV V++ A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 249 DGERERGGAGMPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAE 308
Query: 284 GERAY 288
G AY
Sbjct: 309 GSEAY 313
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ TLV V R +L + V LTD+ ++ + ++G +++
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
L+ + + + LE R GL LEL DRVGLLS+V V +
Sbjct: 320 HLDDRAASSGEERERLRRGLEAAIQRRYT--EGLR-LELCCEDRVGLLSDVTRVFREHGL 376
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSP 170
SV A+V T R A++ YV D +SG P
Sbjct: 377 SVTHAEVGTRGARAANVFYVVDASSGEP 404
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/284 (51%), Positives = 195/284 (68%), Gaps = 11/284 (3%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EY+KL+ R+N PRVVIDN C AT+++VDS +HGILL+ VQVL D+NL+I KAYISS
Sbjct: 3 NEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL------TALELTGT 124
DG +FMDVF+V GNK+ D+ VI+ I+ LE G+ T++EL+GT
Sbjct: 63 DGGWFMDVFNVITYEGNKIRDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGT 122
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEV AVLADL C+VV A VWTHN R A++++V D +G I D Q++ I+ L
Sbjct: 123 DRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELL 182
Query: 185 RNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMMFADRDYERMPVLRHSTD----YPVVTV 239
NVL+G+ +++ AKMT+S VT T+RRLHQ+M ADRDYER + + P VTV
Sbjct: 183 CNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTV 242
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+ ++ Y+++ + +DR KLLFDV+CTLTDMEYVVFH + T
Sbjct: 243 FDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETG 286
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR------FFM 76
P V + + TL+ + R +L + + LTD+ ++ + + GR F
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVET-GRMEENWSFSF 296
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAV 136
F++ +G ++ ++ + LE R + GL LEL DRVGLLS++ +
Sbjct: 297 QEFYIRHKDGLPISSKAERDRVLHCLEAAIERRESE--GL-KLELCAEDRVGLLSDITRI 353
Query: 137 LADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+ + A++ T G+ + YV D +G+ I D++ ++ I ++ + +
Sbjct: 354 FRENSLCIRRAEIATKRGKAKDIFYVTDM-TGTTI-DAKVVESIRKQIGDAM 403
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 192/287 (66%), Gaps = 16/287 (5%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR+HG+LLEAV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSL----------ETIHYGRSNSFNGLTALE 120
GR+FMDVFHVTD +G K+ D +++++ +E SL G T LE
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMPTLLE 129
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
L G DR GLLSEVFAVL DL+C + +A+ WTH GR+A+L++V+D +G+PI+D+ ++ R+
Sbjct: 130 LVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRRV 189
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
E+RLR+VL+G + + + A + +RRLHQ++ D + E D V VQ
Sbjct: 190 ESRLRHVLRG-GALGARMVREDAAAVNMDRRLHQLLNEDGEAE---CRADQADATAVAVQ 245
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 246 DWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 292
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ L+G ++ +
Sbjct: 253 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAER 312
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q L+ R++ LEL TDR GLL+ V V + SV A++ T +
Sbjct: 313 RRVIQCLQAAIERRASEG---VRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTRGDK 369
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ +V D +G P D + ID + R+
Sbjct: 370 AMNVFHVTDV-AGRPA-DPKTIDEVIQRI 396
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/301 (51%), Positives = 196/301 (65%), Gaps = 26/301 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 13 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDY---T 129
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 130 VVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 189
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K TVS A+ THT+R+LHQ+MFADRDY+
Sbjct: 190 SKIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G +A
Sbjct: 250 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 309
Query: 288 Y 288
Y
Sbjct: 310 Y 310
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 5 EWPACLDEYEKL--VIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
EW +D+ +K VI P V + N ++V + R +L + V LTD+N +
Sbjct: 241 EWENNVDDEDKCGRVI----PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYV 296
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A I ++G +++ +G+ + E+ + + L+ R + GL LEL
Sbjct: 297 VSHASIDAEGPQAYQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVS--EGL-KLELC 353
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
+DRVGLLS+V + + +V A+V T + + YV+D SG + D++ I+ I
Sbjct: 354 TSDRVGLLSDVTRIFRENSLTVTRAEVKTKGDKALNTFYVRDA-SGYQV-DTKTIESI 409
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 156/301 (51%), Positives = 196/301 (65%), Gaps = 26/301 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 3 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 62
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 63 DGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDY---T 119
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 120 VVELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 179
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K TVS A+ THT+R+LHQ+MFADRDY+
Sbjct: 180 SKIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDDE 239
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G +A
Sbjct: 240 DKCGRVIPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQA 299
Query: 288 Y 288
Y
Sbjct: 300 Y 300
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 5 EWPACLDEYEKL--VIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
EW +D+ +K VI P V + N ++V + R +L + V LTD+N +
Sbjct: 231 EWENNVDDEDKCGRVI----PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYV 286
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A I ++G +++ +G+ + E+ + + L+ R + GL LEL
Sbjct: 287 VSHASIDAEGPQAYQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVS--EGL-KLELC 343
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
+DRVGLLS+V + + +V A+V T + + YV+D SG + D++ I+ I
Sbjct: 344 TSDRVGLLSDVTRIFRENSLTVTRAEVKTKGDKALNTFYVRDA-SGYQV-DTKTIESI 399
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 196/306 (64%), Gaps = 23/306 (7%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
W EYE L +N PRVVI+NA AT++K+DS RHGILLE VQVLTDL+L I K
Sbjct: 10 WAYFDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISK 69
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ--SLETIHYGRSNSFNGL---TALE 120
AY+SSD +FMDVFHVTD++GNK+TDE V+ +I++ S E R + G TA+E
Sbjct: 70 AYVSSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEGGEITRVSLGTGPHQHTAIE 129
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD-CNSGSPIEDSQQIDR 179
L+G +R GLLSEVF+ L+ + C+V A VWTHN R+A +I+V + C+SG PIED ++
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IEARLRNVLKGDNDIRSAKMTVSM----AVTHTERRLHQMMFADRDY------------- 222
I+ RL V++ ++ R + +TH ERRLHQMM AD D+
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
E + P VTV+N +R YSVVN+ C+DR+KLLFD VCTLTDM+Y++FHATI +
Sbjct: 250 ETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILS 309
Query: 283 AGERAY 288
G AY
Sbjct: 310 EGYFAY 315
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 11 DEYEKLVIR-MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
DE E+ + P V + N V ++V + R +L + V LTD++ +I A I
Sbjct: 249 DETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATIL 308
Query: 70 SDGRFFMDVFHVTDLNGNKL-TDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
S+G F F++ +G L TDE I++ + I F LEL DRVG
Sbjct: 309 SEGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQ----RRFPEGLRLELCTYDRVG 364
Query: 129 LLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
LLS+V V V A V T G +A+ YV D SG + D + ++ I L
Sbjct: 365 LLSDVTKVFHRHGLCVTRAHVSTTRAGTVANTFYVTDAASGDAV-DMRTVEAIREELGQA 423
Query: 188 LKGDNDIRSAKM 199
+ ++RSA +
Sbjct: 424 ML---NVRSAPV 432
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 193/282 (68%), Gaps = 16/282 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVVIDN AT+++VDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D ISYI+++LE +Y + G+ T++ELT
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC--NSGSPIEDSQQIDRI 180
GTDR GLLSEV AVLA +QC+V A++WTHN R+A+++ V D +G IED +I I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQ 240
RL N+L+G N +R+A + ++TH ERRLHQMMF DRDY T+ V+V
Sbjct: 188 SRRLDNLLRGQNGVRAA---AAASLTHKERRLHQMMFEDRDYGAAGPPDPRTE---VSVT 241
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ A+R Y+VV V+C+DR KLLFD VCT+TDM+YVV H T+++
Sbjct: 242 HCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSS 283
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVFHVTDLNGNKLTDES 93
T+V V R +L + V +TD+ ++ +SS+ G + + +++ ++G+ ++ E+
Sbjct: 249 TVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQE-YYIRHVDGHPVSTEA 307
Query: 94 VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ Q LE R+ +GL LE+ DR GLLS+V + + ++ A++ + +
Sbjct: 308 ERRRVVQCLEAAVERRTA--DGLE-LEVRTDDRAGLLSDVTRIFRENGLTIRRAEISSED 364
Query: 154 GRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
G Y+ D G P+E ++ I+ I A++
Sbjct: 365 GEAVDTFYLSDPQ-GHPVE-AKTIEAIRAQI 393
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/301 (51%), Positives = 194/301 (64%), Gaps = 26/301 (8%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE K + R+N PRVVIDN VC T++KVDSA +HGILLE VQVLT+LNL IKKAYISS
Sbjct: 13 DEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISS 72
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGLT 117
DG +FMDVF+VTD +GNK+TDE V+ YI +SL TI +S + T
Sbjct: 73 DGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDY---T 129
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
+ELTGTDR GLLSE+ AVL DLQC+VV A++WTH + A+++ V D + S I D +++
Sbjct: 130 VIELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERL 189
Query: 178 DRIEARLRNVLKGDND---IRSAKMTVSMAV--THTERRLHQMMFADRDYERMPVLRHST 232
+I L VL G + R K VS A+ THT+R+LHQ+MFADRDY+
Sbjct: 190 SKIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDDE 249
Query: 233 D-----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
D P V V N D YS+V ++CKDR KLLFD V TLTDM YVV HA+I+ G A
Sbjct: 250 DKCGRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEA 309
Query: 288 Y 288
Y
Sbjct: 310 Y 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 5 EWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK 64
EW +D+ +K P V + N ++V + R +L + V LTD+N ++
Sbjct: 241 EWENNVDDEDKC--GRVVPDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVS 298
Query: 65 KAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGT 124
A I ++G +++ +G+ + E+ + + L+ R + GL LEL +
Sbjct: 299 HASIDAEGPEAYQEYYIRHTDGSPVKSEAERQRVIKCLKAAIQRRVS--EGL-KLELCTS 355
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS----GSPIEDSQQIDRI 180
DRVGLLS+V + + +V A+V T + + YV+D + IE +Q+ I
Sbjct: 356 DRVGLLSDVTRIFRENSLTVTRAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQV--I 413
Query: 181 EARLRNVLKGDNDIRSA 197
+ V G+ D +++
Sbjct: 414 GQTILQVKGGNTDAKTS 430
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 197/294 (67%), Gaps = 23/294 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN PRVVIDN AT++KVDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMD F+VTD +GNK+ D S ISYI+++LE +Y +++ G+ T++ELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVLA + +V A++WTHN R+A++++V D +G IEDS +I I A
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV------ 236
RL N+L+ +D+R+ S+A+ H ERRLHQMMF DR E H+ P
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLAL-HKERRLHQMMFDDRGVE-----GHAAAAPPDGSLRT 245
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAY 288
V+V + A+R Y+ V V+C+DR KLLFD VCT+TDMEYVV H T++ G AY
Sbjct: 246 EVSVTH-AERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAY 298
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 199/327 (60%), Gaps = 44/327 (13%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
W EYE L +N PRVVI+NA AT++K+DS RHGILLE VQVLTDL+L I K
Sbjct: 10 WAYFDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISK 69
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRSN-----SF 113
AY+SSD +FMDVFHVTD++GNK+TDE V+ +I++SLE I SN S
Sbjct: 70 AYVSSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSA 129
Query: 114 NGL--------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL 159
G TA+EL+G +R GLLSEVF+ L+ + C+V A VWTHN R+A +
Sbjct: 130 EGGEITRVSLGTGPHQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGM 189
Query: 160 IYVKD-CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM----AVTHTERRLHQ 214
I+V + C+SG PIED ++ I+ RL V++ ++ R + +TH ERRLHQ
Sbjct: 190 IFVDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQ 249
Query: 215 MMFADRDY-------------ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
MM AD D+ E + P VT++N +R YSVVN+ C+DR+KLL
Sbjct: 250 MMSADEDHCGESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLL 309
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAY 288
FD VCTLTDM+Y++FHATI + G AY
Sbjct: 310 FDTVCTLTDMDYMIFHATILSEGYFAY 336
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 2 KDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
+++E C + ++ V P V I N V ++V + R +L + V LTD++
Sbjct: 262 RELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFDTVCTLTDMDY 321
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKL-TDESVISYIEQSLETIHYGRSNSFNGLTALE 120
+I A I S+G F F++ +G L TD+ I++ + I F LE
Sbjct: 322 MIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQ----RRFPEGLRLE 377
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
L DRVGLLS+V V V A + T G +A+ YV D SG + D + ++
Sbjct: 378 LCTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAV-DMRTVEA 436
Query: 180 IEARLRNVLKGDNDIRSAKM 199
I L + ++RSA +
Sbjct: 437 IREELGQAML---NVRSAPV 453
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 195/316 (61%), Gaps = 39/316 (12%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KL+ RMN PRVVIDN AT+++VDS +HG LLE VQVLTD+NL+IKKAYISS
Sbjct: 4 DEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISS 63
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------------------GR 109
DG +FMDVF V D +GNK+ D V+ YI++ H+ R
Sbjct: 64 DGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQR 123
Query: 110 SNSFNG-----------------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
S G T++EL GTDR GLLSEV AVL DL C+VV A++WTH
Sbjct: 124 IESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTH 183
Query: 153 NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRL 212
N R A++I+V D ++ S I D ++ I+ L NV++ ++ R+AK S + TH ERRL
Sbjct: 184 NTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSDTHRERRL 243
Query: 213 HQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
HQ+MF DRDYE + R S P VT+ N ++ Y+VV ++ KDR KL+FDVVCTLTDM+
Sbjct: 244 HQIMFDDRDYEGVKRARTSASRPSVTLMN-IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQ 302
Query: 273 YVVFHATINTAGERAY 288
YVVFH ++T AY
Sbjct: 303 YVVFHGMVSTEPVEAY 318
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+V + S R ++ + V LTD+ ++ +S++ F++ ++G + E+
Sbjct: 278 TVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQ 337
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ GL LEL+ DRVGLLS++ + ++V A++ T G+
Sbjct: 338 ERVIQCLEAAIERRAS--EGL-ELELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGK 394
Query: 156 IASLIYVKDCNSGSPIE 172
YV D +G+P+E
Sbjct: 395 AKDTFYVTDV-TGNPVE 410
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 197/294 (67%), Gaps = 23/294 (7%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN PRVVIDN AT++KVDS HG LL VQV+ DLNL+I+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMD F+VTD +GNK+ D S ISYI+++LE +Y +++ G+ T++ELT
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
GTDR GLLSEV AVLA + +V A++WTHN R+A++++V D +G IEDS +I I A
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV------ 236
RL N+L+ +D+R+ S+A+ H ERRLHQMMF DR E H+ P
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLAL-HKERRLHQMMFDDRGVE-----GHAATAPPDGSLRT 245
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT-AGERAY 288
V+V + A+R Y+ V V+C+DR KLLFD VCT+TDM+YVV H T++ G AY
Sbjct: 246 EVSVTH-AERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAY 298
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 190/305 (62%), Gaps = 26/305 (8%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE+EKLVIRMN PRV +DN TATLVKVDSA ++G LLE VQVLT+L L IK+AYIS
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYIS 70
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGRSNSFNGLTA 118
SDG +FMDVFHV D +GNKL D VI IE SL E + + TA
Sbjct: 71 SDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTA 130
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL G DR GLLSEVFAVL DL+C++V ++VWTH+ R+A+L++V D ++ I+D ++D
Sbjct: 131 IELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLD 190
Query: 179 RIEARLRNVLKGDN-DIRSAKMTVSM---------AVTHTERRLHQMMFADR-----DYE 223
++ LR++L+G R K T A H RRLHQMM DR
Sbjct: 191 TVKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPS 250
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
PVV V + A+R Y++VNV+C+DR KLLFD VCTLTDM+YVVFH T+
Sbjct: 251 SSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAE 310
Query: 284 GERAY 288
G AY
Sbjct: 311 GSEAY 315
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
TLV V R +L + V LTD+ ++ + ++G +++ L+ + +T
Sbjct: 275 TLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDER 334
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ + LE R+ GL LEL DRVGLLS+V + + SV A+V T R
Sbjct: 335 DRLGRCLEAAIQRRNT--EGLR-LELCCEDRVGLLSDVTRIFREHGLSVTHAEVATRGAR 391
Query: 156 IASLIYVKDCNSGSPIE 172
A++ YV SG P+E
Sbjct: 392 AANVFYVV-AASGEPVE 407
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 190/300 (63%), Gaps = 29/300 (9%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
EYE R+N PRV IDN C TLVKVDS ++GILLE +QVL+DL+L I KAYI+SD
Sbjct: 8 EYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYITSD 67
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL----------ETIHYGRS---NSFNGLTA 118
G +FMDVFHV D G K+TD+ I YIE++L + GRS +S TA
Sbjct: 68 GGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGDHTA 127
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+EL G DR GLLSE+FAVLADLQC+V+ A+VWTH R+A ++YV D +G I+D ++
Sbjct: 128 IELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPDRVA 187
Query: 179 RIEARLRNVLKGDNDIRSAKM------------TVSMAVTHTERRLHQMMFADRD----Y 222
R+E RLR+VL+G A S H +RRLHQ+M AD D
Sbjct: 188 RVEDRLRHVLRGYGGGGGAGDDDDGSGAHANFAAASSTPHHVDRRLHQLMHADVDAVHGD 247
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
D P VTV++ ++SYSVVNV+CKDR+KLLFD+VCTLTDMEYVVFHA +++
Sbjct: 248 GAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVSS 307
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ + ++V V R +L + V LTD+ ++ A +SS+ + + ++
Sbjct: 260 PAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 319
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I I S F LE+ G DRVGLLS+V VL +
Sbjct: 320 RKDGKTLLKDEAEKVIRCLEAAISRRVSEGFT----LEVCGRDRVGLLSDVTRVLREHGL 375
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV++ SG P++
Sbjct: 376 TVSRADVTTAGGQATNVFYVRN-PSGQPVD 404
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 192/294 (65%), Gaps = 13/294 (4%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
AC R+ R+VIDN AT+V+VDSA +GILLE +QV+ DLNL+I KAY
Sbjct: 4 ACSKPNPGQFWRLIGRRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAY 63
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSLETIHY---GRSNSFNGLTA-- 118
I+SDG +FMDVF+VTD G K+ DE+ ++ YI +SL R S + A
Sbjct: 64 ITSDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAAD 123
Query: 119 ---LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+ELTGTDR GLLSEV AVL L+C+VV A++WTHN R A+++ V D ++G + D++
Sbjct: 124 HNIIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAE 183
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLRHSTDY 234
+++RI +L + +G N R A ++ A THTERRLHQMM D DYE++ +
Sbjct: 184 RLERIREKLSYLFRGGNLSRGATVSSRTATTHTERRLHQMMLDDGDYEQLQRQAPGQSQR 243
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
P VTV+NW D+ YSVV ++CKDR+KLLFD VCTLTD++YVVFHA I+ +AY
Sbjct: 244 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAY 297
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + R +L + V LTDL ++ A I + F+V
Sbjct: 244 PNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 303
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+NG+ + E+ + Q LE R + LEL D+VGLLSEV + +
Sbjct: 304 HVNGSPMNTETERLRVIQCLEAAIERRVSEG---VKLELCTNDKVGLLSEVTRIFRENSL 360
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+V A+V T GR+A + ++G + D + ID I + + L+
Sbjct: 361 TVTRAEV-TTRGRMAVNTFYVRGSAGEAV-DQKAIDSIREAIGHSLQ 405
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 194/302 (64%), Gaps = 26/302 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E+E L+ R+ PRV IDN C T+VKVDSA +HGILLE VQVLTDL+L+I K+YI SD
Sbjct: 12 EFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYICSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGL-------------- 116
G +FMDVFHVTD GNKLTDES+I YI+Q+L T G S
Sbjct: 72 GGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVSTDH 131
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA+E+TG DR G+LSE+ AVLA+LQC V A WTHN R A +IY++D SG PI DS +
Sbjct: 132 TAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITDSNK 191
Query: 177 IDRIEARLRNVLK---GDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYERM------- 225
+ +E +L+NV++ G ++RS ++ + THTERRLHQ+M A DYE
Sbjct: 192 LAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYEPCCGCTDGD 251
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ + V++++ ++ YSVVN++ DR KLLFD +C LTDM+YVVFHA +++ G
Sbjct: 252 AAHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSSKGT 311
Query: 286 RA 287
A
Sbjct: 312 MA 313
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + S R +L + + LTD+ ++ A +SS G + + +G L ES
Sbjct: 274 SVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSSKGTMARQEYFIRHKDGCTLDTESER 333
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ + L I + +GL L+++ +RVGLLS+V V + S+ A++ R
Sbjct: 334 HKLTKCL--IAATERRASHGLR-LDISTHNRVGLLSDVTRVFRENGLSISRAEIGLQGDR 390
Query: 156 IASLIYVKDCNS 167
Y+ D +
Sbjct: 391 AVGSFYITDASG 402
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 186/283 (65%), Gaps = 14/283 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+DN VC TATLV+V SAR+HG+LLEAV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDESVI-------SYIEQSLETIHYGRSNSFNGLTALELTGT 124
GR+FMDVFHVTD G K+ D S + + + T LEL G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPTLLELVGA 129
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLLSEVFAVL DL+C + +A+ WTH GR+A+L++V+D ++G+PI+D+ ++ R+E+RL
Sbjct: 130 DRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRVESRL 189
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
R+VL+G + + + A + +RRLHQ++ D + E + V VQ+W +
Sbjct: 190 RHVLRG-GALGARMVRADAAAVNMDRRLHQLLNEDGEAE-----SRADQATAVAVQDWGE 243
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R YSV+ V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 244 RGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 286
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R +L + V LTDL+ ++ +DG F++ L+G ++ + + Q L+
Sbjct: 256 RPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAERRRVIQCLQA 315
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
R++ LEL TDR GLL+ V V + SV A++ T ++ +V D
Sbjct: 316 AIERRASEG---VRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTRGDMAMNVFHVTD 372
Query: 165 CNSGSPIEDSQQIDRIEARL 184
+G P D + ID + R+
Sbjct: 373 V-AGRPA-DPKTIDEVIQRI 390
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/301 (50%), Positives = 190/301 (63%), Gaps = 30/301 (9%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+DE+EKLVIRMN PRV +DN TATLVKVDSA ++G LLE VQVLTDL L I +AYIS
Sbjct: 14 VDEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYIS 73
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN--------------G 115
SDG +FMDVFHV D GNKL D VI IEQSL S SF
Sbjct: 74 SDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGA----GSLSFRATDAETETAAAAMAQ 129
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE--- 172
TA+EL G DR GLLSEVFAVL +L+C++ ++VWTH+GR+A+L+ V D ++G+ IE
Sbjct: 130 ATAIELVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDD 189
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD-----RDYERMPV 227
D +++D ++ LR+VL+G R+A H RRLHQMM AD
Sbjct: 190 DPERLDTVKRLLRHVLRG----RAAVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDE 245
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ VV V+ A+R Y+VVNV+C+DR KLLFD VCTLTDM+YVVFH T+ G A
Sbjct: 246 EEEDCEGVVVGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEA 305
Query: 288 Y 288
Y
Sbjct: 306 Y 306
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 193/300 (64%), Gaps = 17/300 (5%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ WP +YE N PRV I+N AT+V+V SA RHGILL VQVLTDL+
Sbjct: 1 MENQRWPYFDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ---------SLETIHYGRSN 111
L+I K+ + SDG +F+DVFHV D +GNK+ D+SV+ YI++ LE
Sbjct: 61 LVITKSDMFSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLR 120
Query: 112 SFNGLTA-----LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
+GLT +ELTG DR GLLSE+ AVL ++C+V A+VWTHN R+A +IY + N
Sbjct: 121 RSSGLTTADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTN 180
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYER 224
+G PIE ++ I+ +L VLKGD+D + A+ + A +TH ERRLHQ+M+ DR +
Sbjct: 181 TGGPIESQSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHGE 240
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
R+S P + ++ ++R YS+V++QCKDR KLLFD+VCTLTDM+YV+ HA IN+ G
Sbjct: 241 QDCDRNSQGRPKIQIKK-SERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPG 299
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + R +L + V LTD+ +I A I+S G F + NG L D +
Sbjct: 263 SMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETTQEFFIRHENGCVL-DTAAE 321
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+++ LE R+ GL LEL DRVGLLS+V + + SV A V T + +
Sbjct: 322 QHLKVCLEAAINRRTTE--GLR-LELCMNDRVGLLSDVTKIFRENGLSVARADVTTRDDK 378
Query: 156 IASLIYVKDCNSGSPIEDS------QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTE 209
++ YV D SG ++ + I +++ V + + ++ S+K+++ +E
Sbjct: 379 AVNVFYVVDA-SGCTVDMKVVEAMRKSIGHAILQVKGVPRQEPELSSSKLSLGGLFRTSE 437
Query: 210 R 210
R
Sbjct: 438 R 438
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 191/313 (61%), Gaps = 34/313 (10%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK--------VDSARRHGILLEAVQVLTDLNL 61
+DE+EKLVIRMN PRV +DN TATLVK VDSA ++G LLE VQVLT+L L
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKL 70
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGRS 110
IK+AYISSDG +FMDVFHV D +GNKL D VI IE SL E +
Sbjct: 71 TIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEA 130
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+ TA+EL G DR GLLSEVFAVL DL+C++V ++VWTH+ R+A+L++V D ++
Sbjct: 131 EAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGA 190
Query: 171 IEDSQQIDRIEARLRNVLKGDN-DIRSAKMTVSMAV---------THTERRLHQMMFADR 220
I+D ++D ++ LR++L+G R K T A+ H RRLHQMM DR
Sbjct: 191 IDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDR 250
Query: 221 -----DYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
PVV V + A+R Y++VNV+C+DR KLLFD VCTLTDM+YVV
Sbjct: 251 AAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVV 310
Query: 276 FHATINTAGERAY 288
FH T+ G AY
Sbjct: 311 FHGTVIAEGSEAY 323
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
TLV V R +L + V LTD+ ++ + ++G +++ L+ + +T
Sbjct: 283 TLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDER 342
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ + LE R+ GL LEL DRVGLLS+V + + SV A+V T R
Sbjct: 343 DRLGRCLEAAIQRRNT--EGLR-LELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGAR 399
Query: 156 IASLIYVKDCNSGSPIE 172
A++ YV SG P+E
Sbjct: 400 AANVFYVV-AASGEPVE 415
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 188/279 (67%), Gaps = 19/279 (6%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +DN T T++KVDSA + G LLE VQVLTD+NL +++AYISSDG +FMDVFHVTD
Sbjct: 132 VAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDP 191
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGL------------TALELTGTDRVGLLSE 132
NG K + V I+QSL R++SF L T +ELTG DR GLLSE
Sbjct: 192 NGKKFMQDDVADRIQQSLGP----RASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN 192
VFAVLADL+C+VV A+VWTHN R+AS++Y+ D +G I+D ++ +I+ L VLKGD
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 193 DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST---DYPVVTVQNWADRSYSV 249
D +SA VS+ TH +RRLHQ+M+ADRDY+ ST + +VTV + D+ Y+V
Sbjct: 308 DKKSANTAVSVGSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTV 367
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
VN++C DR KLLFD VCTLTDM+YVV+H T+ G AY
Sbjct: 368 VNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAY 406
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +D+ + T+V + R +L + V LTD+ ++ + ++G +++ +
Sbjct: 355 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 414
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ ++ E+ + LE R++ G+ LEL G DRVGLLS+V + + SV
Sbjct: 415 DGSPISSEAERQRVIHCLEAAIRRRTS--EGI-KLELCGEDRVGLLSDVTRIFRENGLSV 471
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
A+V T + ++ YV D SG+P+ +S+ I+ + +
Sbjct: 472 NRAEVTTRGTQAMNVFYVTDV-SGNPV-NSETIEAVRKEI 509
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 21/300 (7%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
+P EYE R+N PRV IDN T+VKVDS ++GILLE VQVL+DL+L I K
Sbjct: 2 FPYFDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILK 61
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-----------IHYGRS---N 111
AYI+SDG +FMDVFHV + G K+TD+ I YIE++L GRS +
Sbjct: 62 AYITSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMH 121
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
S TA+EL G DR GLLSE+FAVLA+LQC+V+ A+VWTH R+A ++YV D +G PI
Sbjct: 122 SIGDHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPI 181
Query: 172 E-DSQQIDRIEARLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ER 224
+ D++++ IE RLRNVL+G D D A ++ TH +RRLHQ+M AD + +
Sbjct: 182 DVDTRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFAVGSTHVDRRLHQLMNADMELVDAQ 241
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ D VTV ++ YSVVNV+C+DR+KLLFD+VCTLTDM+YVV HA +++ G
Sbjct: 242 GEGEEVADDGMSVTVGYCKEKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDG 301
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTD+ ++ A +SSDG + + + +G L +
Sbjct: 265 SVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGLYGVQELFIRRKDGRTLLKDEED 324
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ I S F LE+ G DRVGLLSEV VL + +V A V T +
Sbjct: 325 KVVKCLQAAISRRVSEGFT----LEVCGRDRVGLLSEVTRVLREHGLTVTRADVATVGEQ 380
Query: 156 IASLIYVKDCNS 167
++ YV+D +
Sbjct: 381 AMNVFYVRDASG 392
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 190/312 (60%), Gaps = 30/312 (9%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV I+N CP T+VKVDSA R GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQ---------------SLETIHYGRSNSFNGL 116
G + MDVFHVTD G KLTDE+++ +I+Q S + + N
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVPKEN 131
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TALE++ TDR GLLSE+ AVL +L CSV A WTHN R+A +I+++D +S PI D ++
Sbjct: 132 TALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPISDPER 191
Query: 177 IDRIEARLRNVLKGDNDIRSAK----MTVSMAVTHTERRLHQMMFADRDYERMPVL---- 228
+ +E +L NV+ + K T+ THTERRLHQ+M+ADRDYE
Sbjct: 192 LGLVEEQLENVVAAHGETGQKKSVRVTTLGTGRTHTERRLHQLMYADRDYESCRACDGDS 251
Query: 229 ----RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA- 283
+ D V+V D+ Y VVNV+ +DR KLLFD VC LTDM+YVVFHA I++
Sbjct: 252 SGEHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKR 311
Query: 284 --GERAYLVINC 293
+ Y + NC
Sbjct: 312 SMAHQEYFIRNC 323
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 188/288 (65%), Gaps = 16/288 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVV+DN C AT+++VDS HG LL VQV+ DL L+I+KAY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D+ ISYI+ +LE +Y + G+ T +ELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK-DCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVLA ++C+V A++WTHN R+A++++V D SG IED +I I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-------ERMPVLRHSTDY 234
RL N+L+G + +R+A +TH ERRLHQMMF DRDY P R T
Sbjct: 196 TRLGNLLRGQSGVRAAAAAAPGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPTPA 255
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
V+V A+R Y+ V V+C+DR KLLFD VCT+TDM YV+ H +++
Sbjct: 256 TEVSVTPCAERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSS 303
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 19 RMNTPRVVIDNAVCPTA----TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
R +P + +V P A T V V R +L + V +TD+ +I +SS+ R
Sbjct: 248 RGRSPTPATEVSVTPCAERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRG 307
Query: 75 FM-DVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEV 133
+++ ++G+ + E+ + Q LE R+ +GL ALE+ DR GLLS+V
Sbjct: 308 GAYQEYYIRHVDGDPVRSEAERQRVVQCLEAAIERRTA--DGL-ALEVRTGDRAGLLSDV 364
Query: 134 FAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ + ++ A++ + G Y+ D G P+E ++ ID I A++
Sbjct: 365 TRIFRENGLTIRRAEISSERGEAVDTFYLSDPQ-GHPVE-AKTIDAIRAQI 413
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 194/314 (61%), Gaps = 27/314 (8%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M+ P E+E L+ R+ PRV IDN TLVK DSA +HGILLE VQVLTDL+
Sbjct: 1 METTYQPYIDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFNGL--- 116
L+I K+YISSDG +FMDVFHVTD GNKLTDES+I YI+Q+L G S
Sbjct: 61 LVISKSYISSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRRRGVSKELPTCLNR 120
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
T LE+ GTDR GLLSE+ AVL +L+C V A WTHN R AS+IY++D
Sbjct: 121 EVRPRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDG 180
Query: 166 NSGSPIEDSQQIDRIEARLRNVLK---GDNDIRSAKMTVSMA--VTHTERRLHQMMFADR 220
G PI D +++ ++ +L NV++ G + RS ++T THTERRLHQ+M+A+
Sbjct: 181 FRGGPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANI 240
Query: 221 DYERM-------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
DYE R++ V +++ ++ YSVVNV+ +DR KLLFD +C LTDM+Y
Sbjct: 241 DYEPCQGCNGGGAAHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQY 300
Query: 274 VVFHATINTAGERA 287
VVFHA +++ G A
Sbjct: 301 VVFHAVVSSKGTMA 314
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 194/299 (64%), Gaps = 22/299 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+ E L+ R+ PRV IDN TLVKVDSA +HGILLE VQVLTDL+L+I K+YISSD
Sbjct: 14 QLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYISSD 73
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------ETIHYGRSNSFNGLTAL 119
G +FMDVFHVTD GNKLTDES+I YI+Q+L + G+ TA
Sbjct: 74 GGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAA 133
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+TG DR GLLSE+FAVL +L C+V A WTH+ + AS+IY+++ +G I+DS+++
Sbjct: 134 EITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAH 193
Query: 180 IEARLRNVL---KGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYER------MPVLR 229
++ +L NV+ G + S K+T S TH ERRLHQ+M+A+ DYE+ +
Sbjct: 194 VQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSKSCK 253
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
S V +++ ++ YS++N++ +DR KLLFD VC LTD++YVVFHA +++ G AY
Sbjct: 254 MSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAY 312
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D E C D+ + + V I++ +++ + S R +L + V LTDL +
Sbjct: 239 DYEQCRCHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYV 298
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A +SS+G + + G L ES + Q+L R + +GL LEL
Sbjct: 299 VFHAAVSSNGTVAYQEYFIRQKGGCILDSESERKRLLQALVAAIERRVS--HGLR-LELC 355
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
+RVGLLS++ V + S+ V T+ R I++ D +
Sbjct: 356 ALNRVGLLSDITRVFRENGFSISTMDVKTNGKRAIGSIFITDASG 400
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 139/299 (46%), Positives = 194/299 (64%), Gaps = 22/299 (7%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+ E L+ R+ PRV IDN TLVKVDSA +HGILLE VQVLTDL+L+I K+YISSD
Sbjct: 14 QLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYISSD 73
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------ETIHYGRSNSFNGLTAL 119
G +FMDVFHVTD GNKLTDES+I YI+Q+L + G+ TA
Sbjct: 74 GGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAA 133
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+TG DR GLLSE+FAVL +L C++ A WTH+ + AS+IY+++ +G I+DS+++
Sbjct: 134 EITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAH 193
Query: 180 IEARLRNVL---KGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYER------MPVLR 229
++ +L NV+ G + S K+T S TH ERRLHQ+M+A+ DYE+ +
Sbjct: 194 VQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQCRCHDDSKSCK 253
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
S V +++ ++ YS++N++ +DR KLLFD VC LTD++YVVFHA +++ G AY
Sbjct: 254 MSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAY 312
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 3 DMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
D E C D+ + + V I++ +++ + S R +L + V LTDL +
Sbjct: 239 DYEQCRCHDDSKSCKMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYV 298
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ A +SS+G + + G L E + Q+L R + +GL LEL
Sbjct: 299 VFHAAVSSNGTVAYQEYFIRQKGGCILDSECERKRLLQALVAAIERRVS--HGLR-LELC 355
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
+RVGLLS++ V + S+ V T+ R I++ D +
Sbjct: 356 ALNRVGLLSDITRVFRENGFSISTMDVKTNGKRAIGSIFITDASG 400
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 184/281 (65%), Gaps = 12/281 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS-D 71
YE V MN PRVV+DN C TATLV+V SAR+HG+LL+AV L+D + ++K YISS D
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSFNGLTA-----LELTGTD 125
GR+FMDVFHV D G K+ D ++++ +E SL A LEL G D
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAAGAGTPTLLELVGAD 129
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYP---VVTVQN 241
+VL+G + + + + + +RRLHQ++ D + R + P V VQ+
Sbjct: 190 HVLRG-GALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQD 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T
Sbjct: 249 WVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHT 289
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +D F++ L+ ++ +
Sbjct: 255 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPISSATER 314
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ Q LE R++ LEL TDR GLL+ V V + SV A++ T
Sbjct: 315 RRVIQCLEAAIERRASEG---VRLELRITDRRGLLAYVTRVFRENSLSVTHAEITTRGDM 371
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ +V D +G P D + ID + R+
Sbjct: 372 AMNVFHVTDV-AGRPA-DPKTIDEVIQRI 398
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M ++ WP +YE N P+V ++ AT+VKV SA RHGILL VQVLTDL+
Sbjct: 1 MGNLRWPYFDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI---------HYGRSN 111
L I K+ I D +FMDVFHV D NGNK D+ +I + T+ H RS
Sbjct: 61 LTITKSDIFHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRST 120
Query: 112 SF--NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ T +ELTG DR GLLSE+ AVL L+C+V A+VWTHN R+AS+IY D N+G
Sbjct: 121 GLTCSEHTVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGR 180
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPV 227
PI ++D I +L V+KGD+D A+ + A +TH ERRLHQ+M+ DR E V
Sbjct: 181 PITAQSKLDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNEVPHV 240
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ PV+ ++ +R YSVV++QCKDR+KLLFD+VCTLTDM+YV++HA IN+ G
Sbjct: 241 SGNPQQRPVIQIKR-NERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPG 296
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + R +L + V LTD+ +I A I+S G F + +NG L D +
Sbjct: 260 SVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIRHVNGCTL-DTADA 318
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+++ LE R++ GL LEL +DR+GLLS+V + + SV A + T + +
Sbjct: 319 EHLKVCLEAAINRRTSE--GL-RLELCMSDRIGLLSDVTRLFRENGLSVARADITTRDDK 375
Query: 156 IASLIYVKDCNSGSPI 171
++ YV D SGSP+
Sbjct: 376 AVNVFYVVDA-SGSPV 390
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 184/281 (65%), Gaps = 12/281 (4%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MN PRVV+DN C TATLV+V SAR+HG+LL+AV L+D + ++K YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSFNGLTA-----LELTGTD 125
GR+FMDVFHV D G K+ D ++++ +E SL A LEL G D
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAAGAGTPTLLELVGAD 129
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR
Sbjct: 130 RPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLR 189
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY-ERMPVLRHSTDYP---VVTVQN 241
+VL+G + + + + + +RRLHQ++ D + R + P V VQ+
Sbjct: 190 HVLRG-GALGARMVRADASAVNMDRRLHQLLNEDGEAGSRADRAESEAEAPTPTAVAVQD 248
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T
Sbjct: 249 WVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHT 289
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 195/299 (65%), Gaps = 17/299 (5%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKK 65
WP EY+ + ++ P+V+IDN ATLVKV S +HG LLE VQ L D++L I K
Sbjct: 7 WPYFDPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISK 66
Query: 66 AYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE------TIHY----GRS---NS 112
AYI+SDG +FMDVFHVTD G K+ DE +I I+++L T + GRS +
Sbjct: 67 AYITSDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQT 126
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+ TA+ELTGTDR GLLSEV AVLA++ C V A+VWTHN R+A ++YV D ++ PIE
Sbjct: 127 ISEHTAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIE 186
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE----RMPVL 228
+ ++++RI +L +++G +D + A+ V+ + TH ERRLHQ+M AD D + + +
Sbjct: 187 NVRKLERILEKLNPIMQGCDDEKVARSVVAESFTHVERRLHQLMLADHDSDPSVSQSQIS 246
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P +TV+ ++++YSVV VQC DR KLLFD VCTLTD++YVV HATI +G A
Sbjct: 247 SRKQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYA 305
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
+ P + ++ ++VKV R +L + V LTDL ++ A I G + +
Sbjct: 249 KQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQE 308
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
+H+ ++G L D+ + +++ LE RS+ GL L L TDR GLL+EV
Sbjct: 309 YHIRSMDGRTL-DDPAKAKVKRCLEAAIERRSS--EGL-RLYLCTTDRPGLLTEVTRTFR 364
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+ SV A+V T + + YV D N G P++ + ++EA
Sbjct: 365 ENGLSVTRAEVSTQGDKAVNTFYVTDVN-GLPVD----LKKVEA 403
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 191/336 (56%), Gaps = 57/336 (16%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK------------------------------ 39
+DE+EKLVIRMN PRV +DN TATLVK
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTG 70
Query: 40 -VDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYI 98
VDSA ++G LLE VQVLT+L L IK+AYISSDG +FMDVFHV D +GNKL D VI I
Sbjct: 71 EVDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRI 130
Query: 99 EQSL-----------ETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
E SL E + + TA+EL G DR GLLSEVFAVL DL+C++V +
Sbjct: 131 ELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSS 190
Query: 148 KVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN-DIRSAKMTVSMAV- 205
+VWTH+ R+A+L++V D ++ I+D ++D ++ LR++L+G R K T A+
Sbjct: 191 EVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIP 250
Query: 206 --------THTERRLHQMMFADR-----DYERMPVLRHSTDYPVVTVQNWADRSYSVVNV 252
H RRLHQMM DR PVV V + A+R Y++VNV
Sbjct: 251 APRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDGGGRGRPVVEVVDCAERGYTLVNV 310
Query: 253 QCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+C+DR KLLFD VCTLTDM+YVVFH T+ G AY
Sbjct: 311 RCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAY 346
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
TLV V R +L + V LTD+ ++ + ++G +++ L+ + +T
Sbjct: 306 TLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIRHLDDSPVTSGDER 365
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+ + LE R+ GL LEL DRVGLLS+V + + SV A+V T R
Sbjct: 366 DRLGRCLEAAIQRRNT--EGLR-LELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGAR 422
Query: 156 IASLIYVKDCNSGSPIE 172
A++ YV SG P+E
Sbjct: 423 AANVFYVV-AASGEPVE 438
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 188/312 (60%), Gaps = 39/312 (12%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
EYE R+N PRV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SD
Sbjct: 8 EYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSD 67
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLT 117
G +FMDVFHV D G K+TDE I +IE++L G S +S T
Sbjct: 68 GGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHT 127
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
A+EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++
Sbjct: 128 AIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRL 187
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMA------------VTHTERRLHQMMFADRDYERM 225
RIE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 188 SRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDD 247
Query: 226 PVLRHST-------------DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
L + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM
Sbjct: 248 DGLDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMH 307
Query: 273 YVVFHATINTAG 284
YVV HA++++ G
Sbjct: 308 YVVSHASVSSDG 319
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ ++V V R +L + V LTD++ ++ A +SSDG + + ++
Sbjct: 270 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 329
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I+ I S F LEL G DRVGLLS+V VL +
Sbjct: 330 RKDGRTLQKDEAGRVIKCLEAAISRRVSEGFT----LELCGRDRVGLLSDVTRVLREHGL 385
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV+D SG P++
Sbjct: 386 TVTRADVTTVGGQAINVFYVRDA-SGEPVD 414
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 194/303 (64%), Gaps = 27/303 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E+E L+ R+ PRV +DN TL+KVDSA + GILLE VQVLTDL+L+I K+YISSD
Sbjct: 13 EFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYISSD 72
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL-------------ETIHYGRSNSFNGL-- 116
G +FM+VFHVTD G+KLTD+S+I YI+Q+L ++H +
Sbjct: 73 GGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYASTDH 132
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA+E+TGTDR GLLSE+ AVL+ L+C V + VWTHN R AS+IY++D G PI D ++
Sbjct: 133 TAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITDPKR 192
Query: 177 IDRIEARLRNVLK---GDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMP----- 226
+ ++ +L NV++ G + RS ++T THT RRLHQ+M+A+ DYE
Sbjct: 193 LAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGCNGG 252
Query: 227 --VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
R++ V++ + ++ YSVVNV+ +DR KLLFD +C LTDM+YVVFHA ++ G
Sbjct: 253 GLAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKG 312
Query: 285 ERA 287
A
Sbjct: 313 TMA 315
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V ID+ ++V V S R +L + + LTD+ ++ A +S+ G + +
Sbjct: 265 VSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKGTMADQEYFIRQQ 324
Query: 85 NGNKLTDES--------VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAV 136
+G L ES +I+ IE+ + H R L++ +R+GLLS V
Sbjct: 325 DGCTLDTESERHKLTQCLIAAIERRVS--HGAR---------LDICTHNRMGLLSNVTRA 373
Query: 137 LADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ S+ A++ T+ R YV D + + Q ID ++ +
Sbjct: 374 FRENGLSISRAEIGTNGDRAVGSFYVTDASGYE--ANPQAIDEVKKEM 419
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 188/307 (61%), Gaps = 29/307 (9%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV IDN C T+VKVDSA R GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------------------ETIHYGRSNSF 113
G + MDVFHVTD G KLTDE+++ +I+Q L + + N
Sbjct: 72 GGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQNVA 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
TALE++ TDR GLLSE+ AVL +L SV A WTHN R+A +I+++D +S PI D
Sbjct: 132 MENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGPISD 191
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAK----MTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+++ +E +L NV+ + T+ THTERRLHQ+M+ADRDYE
Sbjct: 192 PKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDYESC---- 247
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA---GER 286
+ D V+V D+ Y VVNV+ +DR KLLFD VC LTDM+YVVFHA I++ ++
Sbjct: 248 RACDRTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSMADQ 307
Query: 287 AYLVINC 293
Y + +C
Sbjct: 308 EYFIRHC 314
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 182/291 (62%), Gaps = 21/291 (7%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD ++HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------LTALELTGTD 125
+FMDVF+VTD +G+KL + VI +I++ LE+ Y + G T++ELTG D
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGFVPPEDQFTSIELTGAD 135
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLLSEV AVLA L C++V+A+VWTH+ R A++I + D +G I D ++ R + L
Sbjct: 136 RPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELLS 195
Query: 186 NVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADR------------DYERMPVLRHSTD 233
N+++ D VS+ TERRLH+MM DR + RH
Sbjct: 196 NLMQSDGRCNRGATGVSVGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGCGKARHKA- 254
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
V V + +R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G
Sbjct: 255 -AKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEG 304
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG--RFFM 76
R +VV+ + T+V + R +L + + L DL ++ + ++G +
Sbjct: 251 RHKAAKVVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAY 310
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT-ALELTGTDRVGLLSEVFA 135
+++ ++G+ + ++ + + + LE R++ NGL LE+ DRVGLLSE+
Sbjct: 311 QEYYIRHVDGHPVRADAERTRLVRCLEAAVERRAS--NGLELELEVRTEDRVGLLSEITR 368
Query: 136 VLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
V + S++ A + T +G+ YV D G+P+ D + ID + +L
Sbjct: 369 VFRENSLSIIRAAITTKDGKAEDTFYVSD-TYGNPV-DGRTIDAVGEQL 415
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 203/338 (60%), Gaps = 39/338 (11%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
MK++ WP +++ L R+N P RV IDN T+VKVDS + G+LLE VQ+LTD
Sbjct: 1 MKNVCWPYFDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNS------ 112
LNL I K+YIS D +FMDVFHV D N +KLTD+ VI+ I+Q++ T G NS
Sbjct: 61 LNLSISKSYISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTK-GPDNSAKTRRY 119
Query: 113 FNGL---------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
N L TA+E+TGTDR GL SE+ A LADL C+VVEA W+HN R+A + Y+
Sbjct: 120 VNKLLNSDNSGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYIS 179
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA---------VTHTERRLHQ 214
D ++ SPIED ++ IE L VL+ A T ++ T+ ERRLHQ
Sbjct: 180 DQSTDSPIEDPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQ 239
Query: 215 MMFADRDYE-------RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
++ + +DY+ R P + V++++ + YS+V+++CKDR +L+FD VCT
Sbjct: 240 LLVSVKDYDWTSESISRRPKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCT 299
Query: 268 LTDMEYVVFHATINTAGERA---YLV--INCYQFDSNY 300
LTDM+YV+FHA+I++ + A Y + +N Y +S+Y
Sbjct: 300 LTDMQYVIFHASISSKKDNAFQEYFIRHVNGYALNSDY 337
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE--- 92
++V ++ R ++ + V LTD+ +I A ISS + + +NG L +
Sbjct: 280 SIVSIECKDRPRLMFDTVCTLTDMQYVIFHASISSKKDNAFQEYFIRHVNGYALNSDYDK 339
Query: 93 -SVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
V+ +E ++E G+ LEL +RVGLLS++ VL + +VV A + T
Sbjct: 340 HRVVKCLEAAIE------RRVCEGVR-LELCANNRVGLLSDITRVLRENGLNVVRADIAT 392
Query: 152 HNGRIASLIYVKD 164
+ + YVKD
Sbjct: 393 QGEKAINAFYVKD 405
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 187/294 (63%), Gaps = 17/294 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 238 TVQ----NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ + +R Y+VV ++C+DR +LLFD +C LTD+ YVVFH T++ G A
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSA 308
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF---HVTDLNGNKLTDESVISYIEQS 101
R +L + + LTDL+ ++ + ++G + + +V ++G+ + ++ + +
Sbjct: 278 RPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVRHVDGHPVRCDAERLRLVRC 337
Query: 102 LETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
LE R++ +GL LE+ DR GLLSE+ V + S++ A + T +G Y
Sbjct: 338 LEAAVERRAS--DGLE-LEVKTEDRAGLLSEITRVFRENSLSIIRAVITTKDGEADDTFY 394
Query: 162 VKDCNSGSPIE 172
V D G+P++
Sbjct: 395 VSDA-YGNPVD 404
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 187/294 (63%), Gaps = 17/294 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 238 TVQ----NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ + +R Y+VV ++C+DR +LLFD +C LTD+ YVVFH T++ G A
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSA 308
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF---HVTDLNGNKLTDESVISYIEQS 101
R +L + + LTDL+ ++ + ++G + + +V ++G+ + ++ + +
Sbjct: 278 RPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVRHVDGHPVRCDAERLRLVRC 337
Query: 102 LETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
LE R++ +GL LE+ DR GLLSE+ V + S++ A + T +G Y
Sbjct: 338 LEAAVERRAS--DGLE-LEVKTEDRAGLLSEITRVFRENSLSIIRAVITTKDGEADDTFY 394
Query: 162 VKDCNSGSPIE 172
V D G+P++
Sbjct: 395 VSDA-YGNPVD 404
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 181/286 (63%), Gaps = 19/286 (6%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDR 126
+FM VF+VTD +G+KL + VI +I++ LE+ Y G + + T++ELTG DR
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADR 135
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVLA L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+
Sbjct: 136 PGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRD 195
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--------YPVVT 238
V++GD +S ERRLH +M D P V
Sbjct: 196 VMRGDGTCNRGGTGIS-----AERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVV 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
V + A+R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEG 296
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG----RFFMDV 78
P+VV+ + T+V + R +L + + L DL ++ + ++G +
Sbjct: 247 PKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQE 306
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
+++ ++G+ + ++ + + + LE R++ NGL LE+ DRVGLLSE+ V
Sbjct: 307 YYIRHVDGHPVRSDAERARLVRCLEAAVERRAS--NGLE-LEVWTEDRVGLLSEITRVFR 363
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ S++ A + T +G+ YV D G+P+ D + +D + +L
Sbjct: 364 ENSLSIIRAAITTRDGKAEDTFYVSDA-YGNPV-DGRTMDAVGEQL 407
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 181/286 (63%), Gaps = 19/286 (6%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
Y KLV RMN PRVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDR 126
+FM VF+VTD +G+KL + VI +I++ LE+ Y G + + T++ELTG DR
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADR 135
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
GLLSEV AVLA L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+
Sbjct: 136 PGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRD 195
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMF--------ADRDYERMPVLRHSTDYPVVT 238
V++GD +S ERRLH +M + P V
Sbjct: 196 VMRGDGTCNHGGTGIS-----AERRLHTLMLDSVGGGGAEEAGGGGDESGGCGVARPKVV 250
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
V + A+R Y+VV ++C+DR KLLFD +C L D++YVVFH T++ G
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEG 296
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG----RFFMDV 78
P+VV+ + T+V + R +L + + L DL ++ + ++G +
Sbjct: 247 PKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQE 306
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
+++ ++G+ + ++ + + + LE R++ NGL LE+ DRVGLLSE+ V
Sbjct: 307 YYIRHVDGHPVRSDAERARLVRCLEAAVERRAS--NGLE-LEVWTEDRVGLLSEITRVFR 363
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ S++ A + T +G+ YV D G+P+ D + +D + +L
Sbjct: 364 ENSLSIIRAAITTRDGKAEDTFYVSDA-YGNPV-DGRTMDAVGEQL 407
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 184/299 (61%), Gaps = 18/299 (6%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M + +WP +YE N+PRV ++ AT+VKV+SA RHGILL VQVLTDL+
Sbjct: 1 MDNPKWPYFDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN------ 114
L I K+ I D +FMDVFHV D NGNK D+ +I SL + R F+
Sbjct: 61 LTITKSDIFHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLG--YRTRREQFSADSLRR 118
Query: 115 --GL-----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
GL T +ELTG DR GLLSE+ AVL L+C+V A+VWTHN R AS++Y D ++
Sbjct: 119 STGLTVADHTVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSST 178
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERM 225
G PI + ++D I+ +L V+KGD+D A+ + A +TH ERRLHQ+M+ DR E
Sbjct: 179 GRPITNQSKLDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANEVP 238
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ P + ++ +R YSVV++ CKDR KLLFD+VCTLTDM+YV++HA IN G
Sbjct: 239 DRSGNMQGRPAIHIKR-NERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPG 296
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V + R +L + V LTD+ +I A I+ G F + +NG L D +
Sbjct: 260 SVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIRHVNGCTL-DTAAE 318
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
+++ LE R++ GL LEL DRVGLLS+V + + SV A + T + +
Sbjct: 319 QHLKACLEAAISRRTSE--GL-RLELCMNDRVGLLSDVTRIFRENGLSVARADITTRHDK 375
Query: 156 IASLIYVKDCNSGSPI 171
++ YV D SG P+
Sbjct: 376 AINVFYVVDA-SGRPV 390
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 185/295 (62%), Gaps = 14/295 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
M++ WP +YE + PRV I+N T+V+V SA RHGILL VQVLTDL+
Sbjct: 1 MENQSWPYFDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-----------ETIHYGR 109
L+I K+ + SD +F DVFHV D +GNK+ D SV+ +I+ SL + +
Sbjct: 61 LVIVKSDMFSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSS 120
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
S + T +ELTG DR GLLSE+ A+L L C+V A+VWTHN R+A +IY+ D +G
Sbjct: 121 GLSVSDHTVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGG 180
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPV 227
PI+ +++ I+ +L VL+G +D A+ + A +TH ERRLHQ+M+ DR +
Sbjct: 181 PIQTQSRLELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDRRHAGQDY 240
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
R S D P + ++ +R YS+V++QCKDR KLLFD+VCTLTDM+YV+ HA IN+
Sbjct: 241 SRSSEDRPKIQIKR-NERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINS 294
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL---TDE 92
++V + R +L + V LTD+ +I A I+S F + NG L ++
Sbjct: 260 SMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQEFFIRHENGCTLETPAEQ 319
Query: 93 SVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
+I +E ++ + GL LEL DRVGLLSEV + + SV A V T
Sbjct: 320 HLIVCLEAAIN------RRTTKGL-RLELCMNDRVGLLSEVTKIFRENGLSVARADVSTR 372
Query: 153 NGRIASLIYVKDCNSGSPI 171
+ + ++ YV D SG P+
Sbjct: 373 DDKAVNVFYVLDA-SGRPV 390
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 192/327 (58%), Gaps = 31/327 (9%)
Query: 1 MKDME----WPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVL 56
++DME P E E L R++ PRV IDN C T+VK+D A +HGILLE VQ L
Sbjct: 16 VEDMEIVYQQPHIDREIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQAL 75
Query: 57 TDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ-------------SLE 103
TDL+L+I K+YISSDG + MDVFHV D GNKLTD+S++++IEQ S E
Sbjct: 76 TDLDLIISKSYISSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSE 135
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
T+ + A+E+ GTDR GL SE+ VL DL +++ AK WTHN ++ +IY +
Sbjct: 136 TVQHCCKGPQEANVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPE 195
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVL-----KGDNDIRSAKMTVS-MAVTHTERRLHQMMF 217
D + PI + +++ ++ ++RNV+ KGD D+RS + S +HTERRLHQMM+
Sbjct: 196 DASRPGPINERERLAQVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMY 255
Query: 218 ADRDYERMPVL--------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
A DYE + D V+V + R Y VVNV+ +DR KLLFD+VC LT
Sbjct: 256 AASDYESCHACHGDNDSEHKRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLT 315
Query: 270 DMEYVVFHATINTAGERAYLVINCYQF 296
DM+Y VFHA + + A V +Q
Sbjct: 316 DMQYEVFHAAVTSNSPMAEQVHRIFQL 342
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 193/324 (59%), Gaps = 44/324 (13%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
MK++ WP +++ L R+ P RV IDN T+VKVDS + G+LLE VQVLTD
Sbjct: 1739 MKNVCWPYFDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTD 1798
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL-- 116
LNL I K YISSD +FMDVFHV D +G KL D++VI+YI+Q++ T + N
Sbjct: 1799 LNLTIAKGYISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAY 1858
Query: 117 -------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TA+E++GTDR GL SE+ A LADLQC++VE W+HN R+A + Y+
Sbjct: 1859 TNNIFEADHSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYIS 1918
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM---------------AVTHT 208
D +S +PIED ++ IE L VL+ N +RSA + V++
Sbjct: 1919 DPSSHTPIEDPHRLASIEDHLTTVLRA-NTVRSAGEPSQINNREVKTGGFLGGEGTVSNV 1977
Query: 209 ERRLHQMMFADRDYERMPVLRHSTDYP----------VVTVQNWADRSYSVVNVQCKDRT 258
ERRLHQ+M + RD++ P+ ST VV+++N + YS+VN++CKDR
Sbjct: 1978 ERRLHQLMLSVRDFD-GPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRR 2036
Query: 259 KLLFDVVCTLTDMEYVVFHATINT 282
+L+FD +CTL DM+YV+FHA++++
Sbjct: 2037 RLMFDTICTLNDMQYVIFHASVSS 2060
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVF--H 80
V I+N ++V ++ R ++ + + L D+ +I A +SSD GR F + F H
Sbjct: 2015 VSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFHASVSSDHDGRAFQEYFIRH 2074
Query: 81 VTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
N ++ E VI +E ++E R S L L+L +R+GLLS++ VL +
Sbjct: 2075 KDGYARNTESEKERVIKCLEAAIE-----RRVSEGVL--LKLRAENRLGLLSDITRVLRE 2127
Query: 140 LQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+VV A V T + + YV+D SG+ ++
Sbjct: 2128 NGLAVVRADVATEGEKAVNAFYVRDI-SGNEVD 2159
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 187/305 (61%), Gaps = 36/305 (11%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L R++ RV IDN C T+VKVDSA ++GILLE VQVLTDL+L+I K+YISSD
Sbjct: 12 EIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL------ETI---------HYGRSNSFNGL 116
G +FMDVFHVTD G KLTD +++ IE+ L E I Y +S +
Sbjct: 72 GGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYSKQI 131
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TALE++G DR GLLSE+ AVL ++ C+V A WTHNGR+A ++YV++ + PI
Sbjct: 132 VSTENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKPGPI 191
Query: 172 EDSQQIDRIEARLRNVL-----KGD-NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
D +++ +++ +L +V+ KG+ N++R THTERRLHQ+M+ADRDYE
Sbjct: 192 RDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGR--THTERRLHQLMYADRDYEGC 249
Query: 226 PVL--------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFH 277
+ D V++ DR Y VVN+ C+DR KL FD VC L DM+YVVFH
Sbjct: 250 RACHGDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYVVFH 309
Query: 278 ATINT 282
A I++
Sbjct: 310 AAISS 314
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 193/321 (60%), Gaps = 41/321 (12%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK++ WP +++ L R+ P V IDN T+VKVDS + G+LLE VQVLTDLN
Sbjct: 1 MKNVCWPYFDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLN 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE--------------TIH 106
L I K YISSD +FMDVFHV D +G KL D++VI+YI+Q + T +
Sbjct: 61 LTIAKGYISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNN 120
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
++ + TA+E++GTDR GL SE+ A LADLQC++VE W+HN R+A + Y+ D +
Sbjct: 121 IFEADHSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPS 180
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM---------------AVTHTERR 211
S +PIED ++ IE L VL+ N +RSA + V++ ERR
Sbjct: 181 SHTPIEDPHRLASIEDHLTTVLRA-NTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERR 239
Query: 212 LHQMMFADRDYERMPVLRHSTDYP----------VVTVQNWADRSYSVVNVQCKDRTKLL 261
LHQ+M + RD++ P+ ST VV+++N + YS+VN++CKDR +L+
Sbjct: 240 LHQLMLSVRDFD-GPISSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLM 298
Query: 262 FDVVCTLTDMEYVVFHATINT 282
FD +CTL DM+YV+FHA++++
Sbjct: 299 FDTICTLNDMQYVIFHASVSS 319
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVF--H 80
V I+N ++V ++ R ++ + + L D+ +I A +SSD GR F + F H
Sbjct: 274 VSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFHASVSSDHDGRAFQEYFIRH 333
Query: 81 VTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLAD 139
N ++ E VI +E ++E R S L L+L +R+GLLS++ VL +
Sbjct: 334 KDGYARNTESEKERVIKCLEAAIE-----RRVSEGVL--LKLRAENRLGLLSDITRVLRE 386
Query: 140 LQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+VV A V T + + YV+D SG+ ++
Sbjct: 387 NGLAVVRADVATEGEKAVNAFYVRDI-SGNEVD 418
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 187/310 (60%), Gaps = 39/310 (12%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+ L+ +T RV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SDG
Sbjct: 139 QALLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGG 198
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLTAL 119
+FMDVFHV D G K+TDE I +IE++L G S +S TA+
Sbjct: 199 WFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAI 258
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++ R
Sbjct: 259 ELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSR 318
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMA------------VTHTERRLHQMMFADRDYERMPV 227
IE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 319 IEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDG 378
Query: 228 LRH-------------STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
L + + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM YV
Sbjct: 379 LDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYV 438
Query: 275 VFHATINTAG 284
V HA++++ G
Sbjct: 439 VSHASVSSDG 448
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ ++V V R +L + V LTD++ ++ A +SSDG + + ++
Sbjct: 399 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 458
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I+ I S F LEL G DRVGLLS+V VL +
Sbjct: 459 RKDGRTLQKDEAGRVIKCLEAAISRRVSEGFT----LELCGRDRVGLLSDVTRVLREHGL 514
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV+D SG P++
Sbjct: 515 TVTRADVTTVGGQAINVFYVRDA-SGEPVD 543
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 186/310 (60%), Gaps = 39/310 (12%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+ L+ +T RV IDN+ C TLVKVDS ++GILLE VQVL+DL+L I KAYI+SDG
Sbjct: 139 QALLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGG 198
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRS-------NSFNGLTAL 119
+FMDVFHV D G K+TDE I +IE++L G S +S TA+
Sbjct: 199 WFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAI 258
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G DR GLLSEVFAVLA+L C+V+ A+VWTH R+A ++YV D SG + D ++ R
Sbjct: 259 ELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSR 318
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMA------------VTHTERRLHQMMFADRDYERMPV 227
IE RLR VL+G A TH +RRLHQ+M AD D +
Sbjct: 319 IEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDG 378
Query: 228 LRHST-------------DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
L + PVVTV++ ++ YSVVNV+C+DR+KLLFD+VCTLTDM YV
Sbjct: 379 LDSRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYV 438
Query: 275 VFHATINTAG 284
V HA++++ G
Sbjct: 439 VSHASVSSDG 448
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ ++V V R +L + V LTD++ ++ A +SSDG + + ++
Sbjct: 399 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 458
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I+ I S F LEL G DRVGLLS+V VL +
Sbjct: 459 RKDGRTLQKDEAGRVIKCLEAAISRRVSEGFT----LELCGRDRVGLLSDVTRVLREHGL 514
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV+D SG P++
Sbjct: 515 TVTRADVTTVGGQAINVFYVRDA-SGEPVD 543
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 182/286 (63%), Gaps = 17/286 (5%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV RMN P VVIDN C +AT+++VD ++HGILLEAVQVL DLNL+I KAYISS
Sbjct: 15 DEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISS 74
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---------GRSNSFNGLTALEL 121
DG +FMDVF+VTD +GNK+ ++ V I++ LE+ Y G + T +EL
Sbjct: 75 DGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIEL 134
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TGTDR GLLSEV AVLA L+C++V A+VWTH+ R A++I + D +G P+ D ++ +++
Sbjct: 135 TGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQ 194
Query: 182 ARLRNVLKGDNDI----RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVV 237
L NV++GD D R VS+ + ERRLH++M D D R R
Sbjct: 195 ELLGNVMQGDGDGGGDSRKGSTAVSLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKA 254
Query: 238 TVQ----NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHAT 279
+ + +R Y+VV ++C+DR +LLFD + LTD+ YVVFH T
Sbjct: 255 KAKVVVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT 300
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 188/303 (62%), Gaps = 23/303 (7%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E L+ R+ PRV IDN T+VK+DSA RHGILLE QVLTDL+L+I K+
Sbjct: 7 PHIHGEIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKS 66
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFN-GLT------- 117
YISSDG + MDVFHVTD +GNKLTD ++ YI+Q+L E+ + S + LT
Sbjct: 67 YISSDGGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPR 126
Query: 118 ----ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
A+ELT TD+ G+ SE+ AVL L +V A WTHN R+A +I+++D N PI +
Sbjct: 127 VVNLAIELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-N 185
Query: 174 SQQIDRIEARLRNVLKG-------DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++++ +++A+L+NV+K D+ +R + HTERRLHQMM+AD DYER+
Sbjct: 186 AERLAQVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLR 245
Query: 227 VL--RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ V+V + + Y VVNV+ +DR KL FD VC LTDM+Y VFHA +++ G
Sbjct: 246 ACHGEKGCEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNG 305
Query: 285 ERA 287
A
Sbjct: 306 SMA 308
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 176/281 (62%), Gaps = 26/281 (9%)
Query: 13 YEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD- 71
YE V MNTPRVV+D+ VC TATLV+V SAR+HG+LLEAV L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 72 GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETIHYGRSNSFNG----LTALELTGTDR 126
GR+FMDVFHVTD G K+ D +++++ +E SL R+ + LT LEL G DR
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADR 129
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
+ WTH GR+A+L++V+D +G+PI+D+ ++ RIE+RLR+
Sbjct: 130 PASFR----------------RAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRH 173
Query: 187 VLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
VL+G + A + +RRLHQ++ D + + R + V VQ+W +R
Sbjct: 174 VLRGGARCARTVLADPSAAGNLDRRLHQLLKEDGEADS----RGAAPMTAVAVQDWGERG 229
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
YSVV V C+DR KLLFDVVCTLTD++YVV+H T +T G+ A
Sbjct: 230 YSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHA 270
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ +G ++ E+
Sbjct: 231 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 290
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
++ + L+ R++ G+ LEL +DR GLL+ V V + SV A++ T +
Sbjct: 291 QHVIRCLQAAIERRAS--EGVR-LELRISDRRGLLAYVTRVFRENGLSVTHAEITTRD 345
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/307 (44%), Positives = 184/307 (59%), Gaps = 35/307 (11%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
E E L+ R++ PRV IDN T+VK+DSA RHGILLE VQVLTDL+ +I K+YISSD
Sbjct: 12 EIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYISSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFN-----GLT--------- 117
G + MDVFHVTD +GNKLTD ++ YI+Q T+ RSNS LT
Sbjct: 72 GGWLMDVFHVTDHDGNKLTDRGLVHYIQQ---TLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 118 --ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
A+ELT ++ GL SE+ AVL L +V A WTHN R+A +I+++D PI +++
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 QIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL- 228
++ +++ LRNV+K + +R + HTERRLHQMM+AD DYER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACH 247
Query: 229 --------RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
+ + VTV + ++ Y VVNV+ +DR KLLFD VC LTDM+Y VFHA +
Sbjct: 248 VGDRNGEKKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAV 307
Query: 281 NTAGERA 287
++ G A
Sbjct: 308 SSNGSMA 314
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 193/338 (57%), Gaps = 51/338 (15%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP +++ L R+ P RV IDN T+VKV+S + G+LLE VQ+LTD
Sbjct: 1 MQKVCWPYFDPDFDNLGERIYGPPCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET-------IHYGRSN 111
+NL+I K+YISSDG +FMDVFHV D +GNKLTD+SVI++I+ ++ T I +N
Sbjct: 61 MNLIITKSYISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEAN 120
Query: 112 SFNGL----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ N L TA+E+TGTDR GL SE+FA ADL C+V+EA W+HN R+A + Y
Sbjct: 121 N-NSLEPQLADHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAY 179
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT------------- 208
V D N+ +PI+D ++ IE L V++ D S V T
Sbjct: 180 VSDDNTHTPIDDPSRLASIEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMN 239
Query: 209 ---ERRLHQMMFADRDYE--------------RMPVLRHST-DYPVVTVQNWADRSYSVV 250
ERRLHQ+M + RD++ ++ H +V++ N +R YS+V
Sbjct: 240 SNMERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDHKERKTTIVSIGNCEERGYSIV 299
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V+ KDR +L+FD +CTL DM+YV+FHA + + G A+
Sbjct: 300 TVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAF 337
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDES-- 93
++V V S R ++ + + L D+ +I A + SDG + + ++G L E
Sbjct: 297 SIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEK 356
Query: 94 --VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
VI +E ++E G+ LEL +RVGLLS++ VL + +VV A V T
Sbjct: 357 ERVIKCLEAAIE------RRVCEGV-KLELCAENRVGLLSDITRVLRENGLTVVRADVET 409
Query: 152 HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
+ + YV+D SG+ I D + ++ ++ +R +
Sbjct: 410 QGQKSLNAFYVRDI-SGNKI-DMEFVESVKKEMRPI 443
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 173/275 (62%), Gaps = 19/275 (6%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN C AT+++VD +HGILLEAVQVL DLNL+I KAYISSDG +FM VF+VTD
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 84 LNGNKLTDESVISYIEQSLETIHY------GRSNSFNGLTALELTGTDRVGLLSEVFAVL 137
+G+KL + VI +I++ LE+ Y G + + T++ELTG DR GLLSEV AVL
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGYALPEDQFTSIELTGADRPGLLSEVCAVL 130
Query: 138 ADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSA 197
A L C++V+A+VWTH+GR A++I V D +G + D+ ++ R++ LR+V++GD
Sbjct: 131 ATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCNRG 190
Query: 198 KMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD--------YPVVTVQNWADRSYSV 249
+S ERRLH +M D P V V + A+R Y+V
Sbjct: 191 GTGIS-----AERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVVVMDCAERRYTV 245
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
V ++C+DR KLLFD +C L D++YVVFH T++ G
Sbjct: 246 VILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEG 280
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG----RFFMDV 78
P+VV+ + T+V + R +L + + L DL ++ + ++G +
Sbjct: 231 PKVVVMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQE 290
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
+++ ++G+ + ++ + + + LE R++ NGL LE+ DRVGLLSE+ V
Sbjct: 291 YYIRHVDGHPVRSDAERARLVRCLEAAVERRAS--NGLE-LEVWTEDRVGLLSEITRVFR 347
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
+ S++ A + T +G+ YV D G+P+ D + +D + +L
Sbjct: 348 ENSLSIIRAAITTRDGKAEDTFYVSDA-YGNPV-DGRTMDAVGEQL 391
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 192/330 (58%), Gaps = 43/330 (13%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP ++++L R+ P RV IDN ++VKVDS + G+LLE VQVLTD
Sbjct: 1 MQKVCWPYFDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNS------ 112
LNL I K+YISSD +FMDVFHV D G KLTD+ VI YI Q++ T +S +
Sbjct: 61 LNLTISKSYISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATPKSYV 120
Query: 113 ---FNGL-----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
F G TA+E++GTDR GL SE+ A L DL C++VEA W+HN R+A + Y+ D
Sbjct: 121 NDVFEGEHSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISD 180
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAK-------MTVSMAVTHTERRLHQMMF 217
++ +PI+D ++ IE L V++ +++ + VT+ ERRLHQ+M
Sbjct: 181 QSTDTPIDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLML 240
Query: 218 ADRDYERMPVLRHSTDYP-------------------VVTVQNWADRSYSVVNVQCKDRT 258
+ RD++ + P VV++ N ++ YS+V+++CKDR
Sbjct: 241 SARDFDGPLGSSITGSGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRP 300
Query: 259 KLLFDVVCTLTDMEYVVFHATINTAGERAY 288
+L+FD VCTLTDM+YV+FHA+I AG+ Y
Sbjct: 301 RLMFDTVCTLTDMQYVIFHASIG-AGDDGY 329
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS--DGRFFMDVFHVT 82
V IDN ++V ++ R ++ + V LTD+ +I A I + DG F + F +
Sbjct: 279 VSIDNCEEKGYSIVSIECKDRPRLMFDTVCTLTDMQYVIFHASIGAGDDGYAFQEYF-IR 337
Query: 83 DLNGNKLTDES----VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
++G L ES VI +E ++E G+ +EL +RVGLLS++ VL
Sbjct: 338 YIDGYALNTESEKERVIKCLEAAIE------RRVCEGVK-VELCAENRVGLLSDITRVLR 390
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKD 164
+ +VV A V T + + YV+D
Sbjct: 391 ENGLTVVRADVATQGEKAVNAFYVRD 416
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 190/341 (55%), Gaps = 53/341 (15%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTD 58
M+ + WP +++ L R+ P RV IDN T+VKV+S + G+LLE VQ+LTD
Sbjct: 1 MQKVCWPYFDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTD 60
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET------------IH 106
+NL+I K+YISSDG +FMDVFHV D GNKLTD+SVI++I+ ++ T H
Sbjct: 61 MNLIITKSYISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAH 120
Query: 107 YGRSNS--------FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIAS 158
+N+ TA+E+TGTDR GL SE+FA ADL C+V+EA W+HN R+A
Sbjct: 121 NNPNNNSLESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLAC 180
Query: 159 LIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHT---------- 208
+ YV D N+ +PI+D ++ IE L V++ +D S V T
Sbjct: 181 IAYVSDDNTHTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKG 240
Query: 209 ------ERRLHQMMFADRDYERM---PVL------------RHSTDYPVVTVQNWADRSY 247
ERRLHQ+M + RD++ P + +V++ N +R Y
Sbjct: 241 CMNSNVERRLHQLMLSVRDFDEPFCEPSSLSLLSSKLEYCDQKERKTTIVSIGNCEERGY 300
Query: 248 SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
S+V V+ KDR +L+FD +CTL DM+YV+FHA + + G A+
Sbjct: 301 SIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAF 341
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDES-- 93
++V V S R ++ + + L D+ +I A + SDG + + ++G L E
Sbjct: 301 SIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEK 360
Query: 94 --VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
VI +E ++E G+ LEL +RVGLLS++ VL + +VV A V T
Sbjct: 361 ERVIKCLEAAIE------RRVCEGV-KLELCAENRVGLLSDITRVLRENGLTVVRADVET 413
Query: 152 HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV---LKGDN---DIRSAKMTVSMAV 205
+ + YV+D SG+ I D + ++ ++ +R + +K ++ DI + + A
Sbjct: 414 QGQKSLNAFYVRDI-SGNKI-DMEFVESVKKEMRPIHLEVKNEDTTTDIVGSDDPPASAA 471
Query: 206 THTERRLHQMMFAD 219
+ + H+ D
Sbjct: 472 PQPQPQPHRFSLGD 485
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 189/309 (61%), Gaps = 37/309 (11%)
Query: 12 EYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
E+++L R+ P RV IDN TLVKV+S + GILLE V+VLTD+NL I K+YIS
Sbjct: 15 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 74
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI-----------HYGRSNSFNGLTA 118
SD +FM VFHV D +GNKLTD+ VI+YI+Q++ T + S + TA
Sbjct: 75 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 134
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+E++G DR GL SE+ A LADLQ ++VEA WTHN R+A + Y+ D ++ S IED ++
Sbjct: 135 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 194
Query: 179 RIEARLRNVLKGDN-------DIRSAKMTVSMAVTH-TERRLHQMMFADRDYE--RMPVL 228
+IE L VL N +++ A + V A T ERRLHQ+M + D+E P
Sbjct: 195 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 254
Query: 229 RHSTDYP-------------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
S++ P +V++++ +R YS+V+++CKDR +L+FDVVCT+TDM+Y++
Sbjct: 255 S-SSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLI 313
Query: 276 FHATINTAG 284
FH + + G
Sbjct: 314 FHGSTASHG 322
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V ++ R ++ + V +TD+ LI +S G + M + + ++G + E
Sbjct: 286 SIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEK 345
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ + LE R G+ LEL +R+GLLS++ VL + +VV A V T +
Sbjct: 346 EHVVKCLEAAIERRV--CEGVR-LELCANNRLGLLSDITRVLRENGLAVVRADVETQGEK 402
Query: 156 IASLIYVKD 164
+ YVKD
Sbjct: 403 AVNAFYVKD 411
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 166/246 (67%), Gaps = 10/246 (4%)
Query: 48 ILLEAVQVLTDLNLLIKKAYISSD-GRFFMDVFHVTDLNGNKLTD-ESVISYIEQSLETI 105
+LLEAV L++ + ++K YISSD GR+FMDVFHVTD G K+ D +++++ +E SL
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADADALLARLESSLSAE 60
Query: 106 HYGRSNSFNG----LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
R+ + LT LEL G DR GLLSEVFAVL DL+C+ VEA+ WTH GR+A+L++
Sbjct: 61 ALPRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVF 120
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
V+D +G+PI+D+ ++ RIE+RLR+VL+G + A + +RRLHQ++ D +
Sbjct: 121 VRDEETGAPIDDAARVRRIESRLRHVLRGGARCARTVLADPSAAGNLDRRLHQLLNEDGE 180
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
+ R + V VQ+W +R YSVV V C+DR KLLFDVVCTLTD++YVV+H T +
Sbjct: 181 ADS----RGAAPMTAVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFD 236
Query: 282 TAGERA 287
T G+ A
Sbjct: 237 TDGDHA 242
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V V R +L + V LTDL+ ++ +DG F++ +G ++ E+
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ + L+ R++ LEL +DR GLL+ V V + SV A++ T +
Sbjct: 263 QHVIRCLQAAIERRASEG---VRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDM 319
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++ +V D +G P D + ID + R+
Sbjct: 320 AMNVFHVTDV-AGRPA-DPKTIDEVIQRI 346
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 189/309 (61%), Gaps = 37/309 (11%)
Query: 12 EYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
E+++L R+ P RV IDN TLVKV+S + GILLE V+VLTD+NL I K+YIS
Sbjct: 12 EFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYIS 71
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI-----------HYGRSNSFNGLTA 118
SD +FM VFHV D +GNKLTD+ VI+YI+Q++ T + S + TA
Sbjct: 72 SDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTA 131
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
+E++G DR GL SE+ A LADLQ ++VEA WTHN R+A + Y+ D ++ S IED ++
Sbjct: 132 IEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLA 191
Query: 179 RIEARLRNVLKGDN-------DIRSAKMTVSMAVTH-TERRLHQMMFADRDYE--RMPVL 228
+IE L VL N +++ A + V A T ERRLHQ+M + D+E P
Sbjct: 192 KIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTT 251
Query: 229 RHSTDYP-------------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
S++ P +V++++ +R YS+V+++CKDR +L+FDVVCT+TDM+Y++
Sbjct: 252 S-SSETPLGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLI 310
Query: 276 FHATINTAG 284
FH + + G
Sbjct: 311 FHGSTASHG 319
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
++V ++ R ++ + V +TD+ LI +S G + M + + ++G + E
Sbjct: 283 SIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTASHGGYAMQEYFIRHIDGCTVNSEGEK 342
Query: 96 SYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR 155
++ + LE R G+ LEL +R+GLLS++ VL + +VV A V T +
Sbjct: 343 EHVVKCLEAAIERRV--CEGVR-LELCANNRLGLLSDITRVLRENGLAVVRADVETQGEK 399
Query: 156 IASLIYVKD 164
+ YVKD
Sbjct: 400 AVNAFYVKD 408
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/265 (49%), Positives = 172/265 (64%), Gaps = 27/265 (10%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-- 102
++GILLE +QVL+DL+L I KAYI+SDG +FMDVFHV D G K+TD+ I YIE++L
Sbjct: 3 KNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGP 62
Query: 103 --------ETIHYGRS---NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+ GRS +S TA+EL G DR GLLSE+FAVLADLQC+V+ A+VWT
Sbjct: 63 ESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEVWT 122
Query: 152 HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRS-----------AKMT 200
H R+A ++YV D +G I+D ++ RIE RLR+VL+G A T
Sbjct: 123 HRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHANFT 182
Query: 201 -VSMAVTHTERRLHQMMFADRDYERMPVLRHS--TDYPVVTVQNWADRSYSVVNVQCKDR 257
S H +RRLHQ+M AD D L D P VTV++ ++SYSVVNV+C+DR
Sbjct: 183 DASSTPHHLDRRLHQLMHADVDVAPAAALAAGGQGDRPEVTVEHCEEKSYSVVNVKCRDR 242
Query: 258 TKLLFDVVCTLTDMEYVVFHATINT 282
+KLLFD+VCTLTDMEYVVFHA +++
Sbjct: 243 SKLLFDIVCTLTDMEYVVFHAAVSS 267
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +++ + ++V V R +L + V LTD+ ++ A +SS+ + + ++
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
+G L + I I S F LE+ G DRVGLLS+V VL +
Sbjct: 280 RKDGKTLLKDEAEKVIRSLEAAISRRVSEGFT----LEVRGRDRVGLLSDVTRVLREHGL 335
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T G+ ++ YV+D SG P++
Sbjct: 336 TVSRADVTTEGGQATNVFYVRD-PSGQPVD 364
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 185/316 (58%), Gaps = 37/316 (11%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E LV R+N PRV +DN P TL+KVDSA ++GILL+ VQVL DL+L+I K
Sbjct: 8 PRIDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKC 67
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGL---- 116
YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G +SN +
Sbjct: 68 YISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRH 127
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI
Sbjct: 128 VSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPI 187
Query: 172 EDSQQIDRIEARLRNVLK-----GDNDIRSAKMTVSMAV----THTERRLHQMMFADRDY 222
D + +++ L V++ GD ++ + V HTERRLH++M+ + DY
Sbjct: 188 IDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDY 247
Query: 223 ERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
E + R + VT++ A YS+VNV+C+DR KLLFD VC L ++
Sbjct: 248 ENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKEL 305
Query: 272 EYVVFHATINTAGERA 287
++VVFHA G A
Sbjct: 306 QFVVFHAVAGAKGSTA 321
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 5/184 (2%)
Query: 9 CLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
C + + R R+ + C ++V V R +L + V L +L ++ A
Sbjct: 255 CFGDRCDALWRGRCERIHVTIEACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVA 314
Query: 69 SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
+ G + + NG L E + L R++ GL LE+ +++G
Sbjct: 315 GAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRAS--QGLK-LEIRTENKMG 371
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG--SPIEDSQQIDRIEARLRN 186
LLS+V V+ + S+ A++ T YV D N G P E + + + +
Sbjct: 372 LLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAVVS 431
Query: 187 VLKG 190
+KG
Sbjct: 432 AVKG 435
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 182/316 (57%), Gaps = 37/316 (11%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P E E LV R+N PRV +DN P TL+KVDSA ++GILL+ VQVL DL+L+I K
Sbjct: 8 PRIDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKC 67
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGL---- 116
YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G +SN +
Sbjct: 68 YISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRH 127
Query: 117 -----TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI
Sbjct: 128 VSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPI 187
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMT---------VSMAVTHTERRLHQMMFADRDY 222
D + +++ L V++ + + + HTERRLH++M+ + DY
Sbjct: 188 IDPIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDY 247
Query: 223 ERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDM 271
E + R + VT++ A YS+VNV+C+DR KLLFD VC L ++
Sbjct: 248 ENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKEL 305
Query: 272 EYVVFHATINTAGERA 287
++VVFHA G A
Sbjct: 306 QFVVFHAVAGAKGSTA 321
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 177/328 (53%), Gaps = 42/328 (12%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY---GRSNSF---- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L H G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCL 120
Query: 114 -----------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV 162
+G ALE T DR GLLS + +VLAD C V + WTHNGR A ++YV
Sbjct: 121 GNVVGPGGPDVSGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYV 180
Query: 163 KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTV-----SMAVTHTERRLHQMMF 217
D G+ + + RIE + V+ ++ + V + HTERRLHQ+M
Sbjct: 181 TDTAGGAALLPG-RCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMH 239
Query: 218 ADRDYERMPV------------------LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
DRDYE P V++ +W +R Y+VV + +DR +
Sbjct: 240 DDRDYESGPAPTPVDEDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPR 299
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERA 287
LLFD VC LTDM+YVVFHAT+ + G A
Sbjct: 300 LLFDTVCALTDMQYVVFHATVGSQGPLA 327
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 188/323 (58%), Gaps = 57/323 (17%)
Query: 12 EYEKLVIRMNTP--RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
E++ L R++ P RV +DN T+VKVDS + G+LLE VQ+LTD+NL I K++IS
Sbjct: 12 EFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKSFIS 71
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS------------------- 110
SD +FMDVFHV D NGNKLTD+ VI+ I+Q++ GRS
Sbjct: 72 SDAGWFMDVFHVRDENGNKLTDQKVINDIQQAI-----GRSRASSPSQQHSNNNNNNSVF 126
Query: 111 ------------------NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
N + TA+E+TG DR GL SE+ A LADL C++VEA W+H
Sbjct: 127 TTMTNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSH 186
Query: 153 NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK---------GDN--DIRSAKMTV 201
N R+A + Y+ D ++ + I+D ++ IE L VL+ G N D++++++
Sbjct: 187 NARLACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLG 246
Query: 202 SMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP-VVTVQNWADRSYSVVNVQCKDRTK 259
+T ERRLHQ+M + RD+E + +V+V++ + YS+V+++CKDR +
Sbjct: 247 GEGQMTTVERRLHQLMLSVRDFETPSSPKEKKGRKRMVSVESCEQKGYSIVSIECKDRPR 306
Query: 260 LLFDVVCTLTDMEYVVFHATINT 282
L+FD VCTLTDM+YV+FHA+I +
Sbjct: 307 LMFDTVCTLTDMQYVIFHASITS 329
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
++D E P+ E +K RM V +++ ++V ++ R ++ + V LTD+
Sbjct: 265 VRDFETPSSPKE-KKGRKRM----VSVESCEQKGYSIVSIECKDRPRLMFDTVCTLTDMQ 319
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
+I A I+S + + + ++G L S + + LE R G+ LE
Sbjct: 320 YVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAIERRV--CEGIR-LE 376
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
L +RVGLLS++ VL + VV A V TH + + YV+D
Sbjct: 377 LCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVRD 420
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 153/229 (66%), Gaps = 19/229 (8%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLETIH--YGRSNSF-------------NGLTALE 120
M VF+VTD NG K+ DESV+ I ++ IH G + F + T +E
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEI---VKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIE 57
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
LTGTDR GLLSEV AVL +L+C+VV A+VWTHN R A+++ V D +G I D+Q++ RI
Sbjct: 58 LTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARI 117
Query: 181 EARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD-YPVVTV 239
+ RL V KG N + K TV+M +THTERRLHQ+M DRDYER R + + PVV+V
Sbjct: 118 KERLSYVFKGSNRSQDTKTTVTMGITHTERRLHQLMLEDRDYERYDKDRTNVNPTPVVSV 177
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
NW D+ YSVVN++CKDR KLLFD VCTLTDM+YVVFH ++++ G AY
Sbjct: 178 VNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAY 226
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 11 DEYEKLVIRMN-TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
+ Y+K +N TP V + N + ++V + R +L + V LTD+ ++ +
Sbjct: 160 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 219
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGL 129
S+G +++ ++G+ + E+ + Q LE R + GL LEL+ DRVGL
Sbjct: 220 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEAAIERRVS--EGL-KLELSTGDRVGL 276
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV-- 187
LS+V + + +V A+V T + + YV+D +GS D + ++ I +
Sbjct: 277 LSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDA-AGSSAVDLKTLEAIRQEIGQTVL 335
Query: 188 -LKGDNDIRSA 197
+KG D R +
Sbjct: 336 QVKGHPDHRKS 346
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 173/341 (50%), Gaps = 55/341 (16%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ ++ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH----YGRSNSF--- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+Q+L +G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTC 120
Query: 114 ------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ +LE T DR GLLS + VL D C V + WTH+GR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLY 180
Query: 162 V--KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRLHQ 214
V P S+ IE + V+ + A+ V M+ HTERRLHQ
Sbjct: 181 VTMTAAAEAQPPHQSRWA-HIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQ 239
Query: 215 MMFADRDYERMPV----------------------------LRHSTDYPVVTVQNWADRS 246
+M DRDYE P R VT+ NW +R
Sbjct: 240 LMHDDRDYESGPAPTPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERG 299
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
Y+VV + +DR KLLFD VC LTDM+YVVFHAT+ + G A
Sbjct: 300 YAVVKMTSRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLA 340
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 170/330 (51%), Gaps = 44/330 (13%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ ++ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLT--- 117
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+Q+L S T
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCL 120
Query: 118 ---------------ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV 162
+LE T DR GLLS + VL D C V + WTH+GR A ++YV
Sbjct: 121 GNVVGPGGPDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYV 180
Query: 163 KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRLHQMMF 217
+ S + RIE + V+ ++ + V M+ HTERR+HQ+M
Sbjct: 181 TATGADSAALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMH 240
Query: 218 ADRDYERMPVL--------------------RHSTDYPVVTVQNWADRSYSVVNVQCKDR 257
D DYE P H T+ VT+ NW ++ Y++V + +DR
Sbjct: 241 DDGDYESSPAPTPVDEEHFCMGDRAATAARSAHRTET-RVTIDNWEEKGYAIVKMTSRDR 299
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTAGERA 287
KLLFD VC LTDM YVVFHAT+ G A
Sbjct: 300 PKLLFDTVCALTDMHYVVFHATVGAQGPLA 329
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 183/300 (61%), Gaps = 28/300 (9%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRV IDN + T ++VDS HG LL VQV+TDLNL+++KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHY--GRSNSFN-----------G 115
DG +FMDVF+VTD +G K+TDE+ ++YI+ +LE+ +Y R NS +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE-DS 174
+++ELTGTDR GLLSEV AVL+D++C+VV A +WT N R+A+++ V D +G I D
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 QQIDRIEARLRNVLKGDN-----DIRSAKMTVSMAVTHTERRLHQMMFADR-------DY 222
++ I RL ++L+ + S S+ H ERRLHQ+M AD D
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDG 247
Query: 223 ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ +T VV V + A R Y+ V V+C+D KLLFD VCT+TD +YVV+H ++T
Sbjct: 248 AYLQPAPGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVST 307
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 175/339 (51%), Gaps = 57/339 (16%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY----GRSNSF--- 113
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L G S F
Sbjct: 61 LVISKSYISSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTC 120
Query: 114 ------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ ALE T DR GLLS + VLAD C V + WTH+GR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLY 180
Query: 162 V----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-----HTERRL 212
V + + + + IE + V+ + + VSM+ HTERRL
Sbjct: 181 VTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRL 240
Query: 213 HQMMFADRDYERMPVLRHSTDYPV------------------------VTVQNWADRSYS 248
HQ+M DRDYE P PV V++++W +R Y+
Sbjct: 241 HQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYA 295
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VV + +DR KLLFD VC LTDM YVVFHAT+ + G A
Sbjct: 296 VVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLA 334
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 142/196 (72%), Gaps = 8/196 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEYEKL+ RMN PRVVIDN C A++++VDSA +HGILLE VQVL DLNL+I KAYISS
Sbjct: 9 DEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET----IHYGRSN----SFNGLTALELT 122
DG +FMDVF+VTD +GNK+TDE ++ YI++SL + I R + T++ELT
Sbjct: 69 DGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELT 128
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G+DR GLLSEV AVL L+CSVV A+VWTHN R A++++V D +G I D +++ +++
Sbjct: 129 GSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 188
Query: 183 RLRNVLKGDNDIRSAK 198
L NVLKG N R AK
Sbjct: 189 LLCNVLKGSNKSREAK 204
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 48 ILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY 107
+L + V LTD+ ++ A + ++G +++ ++G+ + ++ + Q LE
Sbjct: 206 LLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIE 265
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
R + GL LEL TDRVGLLS+V + + SV A+V T G+ + +V+D S
Sbjct: 266 RRVS--EGL-KLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNTFHVRDA-S 321
Query: 168 GSPIEDSQQIDRI-EARLRNVLK 189
G P+ D++ ID I EA + +L+
Sbjct: 322 GYPV-DAKTIDSIREAIGQTILQ 343
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 43/208 (20%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
+ + + ++ G+L EV VL DL + +A + + G + V D G+ I D +
Sbjct: 34 SVIRVDSANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTD-QDGNKITDEEI 92
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAV-THTERRLHQMMFADRD---YERMPVLRHST 232
+D I+ L G + + M S+ V T+ ++ +DR E VL H
Sbjct: 93 LDYIQKSL-----GSDACFISSMRRSVGVIPSTDHTSIELTGSDRPGLLSEVSAVLTH-L 146
Query: 233 DYPVVTVQNWA--DRSYSVVNV------------------------------QCKDRTKL 260
VV + W R+ +V++V + ++ L
Sbjct: 147 KCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQLLCNVLKGSNKSREAKTL 206
Query: 261 LFDVVCTLTDMEYVVFHATINTAGERAY 288
LFD VCTLTDM+YVVFHA ++ G AY
Sbjct: 207 LFDTVCTLTDMQYVVFHANVDAEGPEAY 234
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 168/317 (52%), Gaps = 51/317 (16%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+++ L+ R+ TP VV+DN TLVKVDS R G+LL+ VQ+LTDL+L+I K+YI SD
Sbjct: 12 DFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYICSD 71
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH-----------------YGRSNS-F 113
G + MDVFHVTD G KLTD S+ +I+++L H G +
Sbjct: 72 GGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAGPDV 131
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+G ALE T DR GLLS + +VLAD C V + WTHNGR A ++YV P+
Sbjct: 132 SGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVT-----PPL-- 184
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAK-----MTVSMAVTHTERRLHQMMFADRDYERMPV- 227
+ R+E + V+ ++ + + HTERRLHQ+M DRDYE P
Sbjct: 185 PSRWARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYESGPAP 244
Query: 228 --------------------LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCT 267
R + V+V +W +R Y VV + +DR LLFD VC
Sbjct: 245 TPVDEGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLFDTVCA 304
Query: 268 LTDMEYVVFHATINTAG 284
LTDM+YVVFHAT+ + G
Sbjct: 305 LTDMQYVVFHATVGSQG 321
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 176/337 (52%), Gaps = 50/337 (14%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHY-GRSNSFNGLT-- 117
L+I K+YISSDG + MDVFHVTD G KLTD S+ +I+++L H G S T
Sbjct: 61 LVIYKSYISSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTC 120
Query: 118 ----------------ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
ALE T DR GLLS + +VL D C V + WTHNGR A ++Y
Sbjct: 121 LGNVVGPGGPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLY 180
Query: 162 VKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS------------MAVTHTE 209
V + + + + + +R + + N + A+ V+ HTE
Sbjct: 181 VTTTAAATTADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTE 240
Query: 210 RRLHQMMFADRDYERMPV-----------------LRHSTDYPV--VTVQNWADRSYSVV 250
RRLHQ+M DRDYE P R + V V++ +W +R Y+VV
Sbjct: 241 RRLHQLMHDDRDYESGPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVV 300
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ +DR +LLFD VC LTDM+YVVFHAT+ + G A
Sbjct: 301 KMTSRDRPRLLFDTVCALTDMQYVVFHATVGSQGALA 337
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 184/308 (59%), Gaps = 33/308 (10%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YE L R+ RV +DN C T+VKV+S + +LLE ++VL DL L I K Y+SSD
Sbjct: 11 DYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYVSSD 70
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR-----SNSFNG-------LTAL 119
G + +DVFHV D G+K+ ++ ISYIEQ++ T R SN F T +
Sbjct: 71 GGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHYTEI 130
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
E+ G +R G+ SE+ AVLA+ C+V+EA W+H +A + +V D ++ SPI D ++
Sbjct: 131 EMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNRLAT 190
Query: 180 IEARLRNVLKG----DNDIRSAK---MTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
IE L VL+ D+D RSA+ + V +H ERRLHQ+MFA RD++ P + ST
Sbjct: 191 IEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPG-QVST 249
Query: 233 DYPVVTVQNWA-------------DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHAT 279
+P++++ + ++ YSVVNV+C DR KL+FD VCTLTDM++ VFHA+
Sbjct: 250 AFPMLSLDGYKKDKSTVVSLDRCNEKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVFHAS 309
Query: 280 INTAGERA 287
+++ G A
Sbjct: 310 VSSQGPFA 317
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 175/348 (50%), Gaps = 66/348 (18%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMD---------VFHVTDLNGNKLTDESVISYIEQSLETIHY---- 107
L+I K+YISSDG + MD +FHVTD G KLTD S+ +I+++L
Sbjct: 61 LVISKSYISSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGN 120
Query: 108 GRSNSF---------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
G S F + ALE T DR GLLS + VLAD C V + WTH
Sbjct: 121 GPSPRFTTCLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTH 180
Query: 153 NGRIASLIYV----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-- 206
+GR A ++YV + + + + IE + V+ + + VSM+
Sbjct: 181 SGRAAGVLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE 240
Query: 207 ---HTERRLHQMMFADRDYERMPVLRHSTDYPV------------------------VTV 239
HTERRLHQ+M DRDYE P PV V++
Sbjct: 241 GRVHTERRLHQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSI 295
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
++W +R Y+VV + +DR KLLFD VC LTDM YVVFHAT+ + G A
Sbjct: 296 ESWEERGYAVVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLA 343
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 175/348 (50%), Gaps = 66/348 (18%)
Query: 1 MKDMEWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
MK + P +++ L+ R TP VV+DN TLVKVDS R G+LLE VQ+LTDL+
Sbjct: 1 MKYVSGPYFEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLD 60
Query: 61 LLIKKAYISSDGRFFMD---------VFHVTDLNGNKLTDESVISYIEQSLETIHY---- 107
L+I K+YISSDG + MD +FHVTD G KLTD S+ +I+++L
Sbjct: 61 LVISKSYISSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGN 120
Query: 108 GRSNSF---------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
G S F + ALE T DR GLLS + VLAD C V + WTH
Sbjct: 121 GPSPRFTTCLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTH 180
Query: 153 NGRIASLIYV----KDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-- 206
+GR A ++YV + + + + IE + V+ + + VSM+
Sbjct: 181 SGRAAGVLYVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVE 240
Query: 207 ---HTERRLHQMMFADRDYERMPVLRHSTDYPV------------------------VTV 239
HTERRLHQ+M DRDYE P PV V++
Sbjct: 241 GRVHTERRLHQLMHDDRDYESGPAA-----TPVDEEHFSMGDKAATTARLARRVETRVSI 295
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
++W +R Y+VV + +DR KLLFD VC LTDM YVVFHAT+ + G A
Sbjct: 296 ESWEERGYAVVKMTSRDRPKLLFDTVCALTDMHYVVFHATVGSQGPLA 343
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 132/193 (68%), Gaps = 9/193 (4%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY KLV MN PRVV+DN C AT+++VDS HG LL VQV+ DL L+I+KAY SS
Sbjct: 16 DEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFSS 75
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET--IHYGRSNSFNGL------TALELT 122
DG +FMDVF+VTD +GNK+ D+ ISYI+ +LE +Y + G+ T +ELT
Sbjct: 76 DGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELT 135
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK-DCNSGSPIEDSQQIDRIE 181
GTDR GLLSEV AVLA ++C+V A++WTHN R+A++++V D SG IED +I I
Sbjct: 136 GTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADIS 195
Query: 182 ARLRNVLKGDNDI 194
RL N+L+G + +
Sbjct: 196 TRLGNLLRGQSGL 208
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 47 GILLEAVQVLTDLNLLIKKAYISSDGRFFM-DVFHVTDLNGNKLTDESVISYIEQSLETI 105
G+L + V +TD+ +I +SS+ R +++ ++G+ + E+ + Q LE
Sbjct: 207 GLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQCLEAA 266
Query: 106 HYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
R+ +GL ALE+ DR GLLS+V + + ++ A++ + G Y+ D
Sbjct: 267 IERRTA--DGL-ALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSDP 323
Query: 166 NSGSPIEDSQQIDRIEARL 184
G P+E ++ ID I A++
Sbjct: 324 Q-GHPVE-AKTIDAIRAQI 340
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 76 MDVFHVTDLNGNKLTDE-SVISYIEQSLETIHYGRSNSF----NGLTALELTGTDRVGLL 130
MDVFHV D G K+ D ++++ +E SL T LEL G DR GLL
Sbjct: 1 MDVFHVVDAAGGKVADAGALLARLESSLSADALPPRPPPAAGAGTPTLLELVGADRPGLL 60
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
SEVFAVL DL+C V+A+ WTH GR+A+L++V+D +GSPI+D+ ++ R+E+RLR+VL+G
Sbjct: 61 SEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHVLRG 120
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ + + A + +RRLHQ++ D + + V VQ+W +R YSVV
Sbjct: 121 -GALGARMVRADAAAVNMDRRLHQLLNEDGEAGSRADQAEAPTPTAVAVQDWGERGYSVV 179
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
V C+DR KLLFDVVCTLTD++YVV+H T +T
Sbjct: 180 TVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHT 211
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 155/270 (57%), Gaps = 37/270 (13%)
Query: 53 VQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG---- 108
VQVL DL+L+I K YISSDG +FMDVFHVTD GNKLTD S+I YI+Q++ + G
Sbjct: 2 VQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITK 61
Query: 109 --RSNSFNGL---------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
+SN + TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A
Sbjct: 62 EMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAA 121
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK-----GDNDIRSAKMTVSMAV----THT 208
+IY++D +G PI D + +++ L V++ GD ++ + V HT
Sbjct: 122 MVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHT 181
Query: 209 ERRLHQMMFADRDYERM-----------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDR 257
ERRLH++M+ + DYE + R + VT++ A YS+VNV+C+DR
Sbjct: 182 ERRLHELMYGEGDYENCFDCDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDR 239
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTAGERA 287
KLLFD VC L ++++VVFHA G A
Sbjct: 240 PKLLFDTVCALKELQFVVFHAVAGAKGSTA 269
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 5/184 (2%)
Query: 9 CLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
C + + R R+ + C ++V V R +L + V L +L ++ A
Sbjct: 203 CFGDRCDALWRGRCERIHVTIEACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVA 262
Query: 69 SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
+ G + + NG L E + L R++ GL LE+ +++G
Sbjct: 263 GAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRAS--QGLK-LEIRTENKMG 319
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG--SPIEDSQQIDRIEARLRN 186
LLS+V V+ + S+ A++ T YV D N G P E + + + +
Sbjct: 320 LLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAVVS 379
Query: 187 VLKG 190
+KG
Sbjct: 380 AVKG 383
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA E+TGTDR GL+SE+ AVLA+L C V A WTHN R+A +I ++D G PI D ++
Sbjct: 2 TAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPER 61
Query: 177 IDRIEARLRNVLKG---DNDIRSAKMTVSMAV-THTERRLHQMMFADRDYER-MPVLRHS 231
+ +E +L NV++ + R ++T +A THT+RRLHQ+MFAD+DYER S
Sbjct: 62 LVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGS 121
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+D V+++N ++ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +++ G
Sbjct: 122 SDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKG 174
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V I+N ++V V S R +L + V LTD+ ++ A +SS G + + +
Sbjct: 126 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 185
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
++G L ES + + Q L I +GL L++ +R+GLLS++ V + S
Sbjct: 186 MDGCTLGTESERNRVAQCL--IAAIERRVTHGLR-LDIRIKNRLGLLSDITRVFRENGLS 242
Query: 144 VVEAKVWTHNGRIASLIYVKD 164
+ A++ H R + YV D
Sbjct: 243 IRMAEIGIHGERASGSFYVTD 263
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 158/320 (49%), Gaps = 49/320 (15%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
L EYE L +R++ P VV+DN TL+ +DSA R G L+E VQ+LT+L L + KA
Sbjct: 118 GALLEYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKAR 177
Query: 68 ISSDGRFFMDVFHVTDLNGNKLT-DESVISYIEQSLETIHYGRSNSFNGLTALELTGTDR 126
ISSDG +F+D FHVTD L+ D S E + S T EL G DR
Sbjct: 178 ISSDGGWFVDEFHVTDAGKKVLSVDTDPGSDAEADVGVFEEASQCS----TVFELAGNDR 233
Query: 127 VGLLSEVFAVLADLQCSVVE--------AKVWTHNGRIASLIYVKD-------------- 164
+GLL+EV A+L + C V A VWTHN R+A +I V +
Sbjct: 234 IGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGAVAAPA 293
Query: 165 -----CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT----HTERRLHQM 215
PI+D ++ ARLR +L G D V++A T H ERRLHQ+
Sbjct: 294 PGGGVGGGSCPIKDGIKL----ARLRQLLLGMMDPSGQDSVVNVATTKGLIHYERRLHQL 349
Query: 216 MFADRDYE---------RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVC 266
+ + + + P V++Q+ +Y +++++C+DR KLLFD VC
Sbjct: 350 LLKEEEAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLFDTVC 409
Query: 267 TLTDMEYVVFHATINTAGER 286
TL D+ Y V+H ++ ER
Sbjct: 410 TLADLNYDVYHGAVDCEVER 429
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
+YE L +R+N ++ IDN T +++DSA G L+E VQ + LNL I++A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSL----ETI--------HYGRSNSFNGLTAL 119
+F DVF VT++NG K+ + + ++++ L E I H G S T +
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEEGIFSNAGAMGHEGASGPTES-TVV 119
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDR 179
EL G D+ G L++V +L + C+V A VWT+ GR+A ++ V G PI D ++
Sbjct: 120 ELAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSV--LEKGKPIADQVKLQG 177
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFAD--RDYERMPVLRHSTDYPVV 237
+ + +++ + + S V H +R LHQMM A+ R +++ + P +
Sbjct: 178 LRQIMLDIMGPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHSTHAARLKPNI 237
Query: 238 TVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
++ Y ++++ CKDR KLLFD VCTL DMEY V+H TIN+
Sbjct: 238 SIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINS 282
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 139/251 (55%), Gaps = 33/251 (13%)
Query: 78 VFHVTDLNGNKLTDESVISYIEQSLETIHYGR-----SNSFNG-------LTALELTGTD 125
VFHV D GNK+ + I+YIEQ++ T GR SN T +E+ G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R G+ SE+ AVLA+ C+V+EA W+H +A + +V D ++ + I D ++ I+ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVLKG----DNDIRSAK---MTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP--- 235
VL D D R A+ + V +H ERRLHQ+MFA +D++ P + S +P
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPG-QVSAAFPMLS 196
Query: 236 ----------VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
VV+V ++ YSV++V+C DR KL+FD VCTLTDM++ VFHA++++ G
Sbjct: 197 LDGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGP 256
Query: 286 RAYLVINCYQF 296
A V +C F
Sbjct: 257 FACQVASCTSF 267
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 109/160 (68%), Gaps = 5/160 (3%)
Query: 130 LSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+SE+ AVLA+L C V A WTHN R+A +I ++D G PI D +++ +E +L NV++
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 G---DNDIRSAKMTVSMAV-THTERRLHQMMFADRDYERM-PVLRHSTDYPVVTVQNWAD 244
+ R ++T +A THT+RRLHQ+MFAD+DYER S+D V+++N +
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYERCCGGCDGSSDRIQVSIENCKE 120
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ YSVVNV+ +DR KLLFD VCTLTDM+YVVFHA +++ G
Sbjct: 121 KGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKG 160
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V I+N ++V V S R +L + V LTD+ ++ A +SS G + + +
Sbjct: 112 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 171
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
++G L ES + + Q L I +GL L++ +R+GLLS++ V + S
Sbjct: 172 MDGCTLGTESERNRVAQCL--IAAIERRVTHGLR-LDIRIKNRLGLLSDITRVFRENGLS 228
Query: 144 VVEAKVWTHNGRIASLIYVKD 164
+ A++ H R + YV D
Sbjct: 229 IRMAEIGIHGERASGSFYVTD 249
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 14/225 (6%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD 71
EYE L +R++ P V IDN TL+ +DSA R G L+E VQ+LT+L L + KA ISSD
Sbjct: 45 EYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSD 104
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL-----------TALE 120
G +F+D F VTD G K+T+E + I + L S++ +G+ T E
Sbjct: 105 GGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFE 163
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI 180
L G DR+GLL++V +L C V A VWTHN R A +I V DC++G PI+D+ ++ R+
Sbjct: 164 LAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARL 223
Query: 181 EARLRNVLKGDNDIRSAKMTVS--MAVTHTERRLHQMMFADRDYE 223
L N++ D+ + + VS + H ERRLHQ++ + + +
Sbjct: 224 RQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI------NTAGERAY 288
P V VQ+ R Y +VN++C+DR KLLFD VCTL D+ Y V+H + + AG +
Sbjct: 505 PEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKVS 564
Query: 289 LVINCYQFDSNYCCIY 304
+ + + Y Y
Sbjct: 565 IAVQTFYMRPRYGDAY 580
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 77/92 (83%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
+EYEKL+ RMN PRVVIDN C AT+++VDSA +GILLE VQ+LTDLNL I KAYISS
Sbjct: 9 NEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISS 68
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVF+VTD +GNK+TDE V+ YI++SL
Sbjct: 69 DGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSL 100
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 22/191 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
TA E+TG +R GLLSE+ AVL+D+ C V A WTH+ R A +IY++D +G PI D +
Sbjct: 102 TAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIR 161
Query: 177 IDRIEARLRNVLK-----GDNDIRSAKMTVSMAV----THTERRLHQMMFADRDYERM-- 225
+++ L V++ GD ++ + V HTERRLH++M+ + DYE
Sbjct: 162 KAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENCFD 221
Query: 226 ---------PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
+ R + VT++ A YS+VNV+C+DR KLLFD VC L ++++VVF
Sbjct: 222 CDCFGDRCDALWRGRCERIHVTIE--ACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVF 279
Query: 277 HATINTAGERA 287
HA G A
Sbjct: 280 HAVAGAKGSTA 290
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 5/184 (2%)
Query: 9 CLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI 68
C + + R R+ + C ++V V R +L + V L +L ++ A
Sbjct: 224 CFGDRCDALWRGRCERIHVTIEACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVA 283
Query: 69 SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
+ G + + NG L E + L R++ GL LE+ +++G
Sbjct: 284 GAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRAS--QGLK-LEIRTENKMG 340
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG--SPIEDSQQIDRIEARLRN 186
LLS+V V+ + S+ A++ T YV D N G P E + + + +
Sbjct: 341 LLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAVVS 400
Query: 187 VLKG 190
+KG
Sbjct: 401 AVKG 404
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE++K V+RMN PRV +DN TL+KVDSA + G LLE VQVL D+NL +++AYISS
Sbjct: 12 DEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVFHVTD NGNKL+++ V I+QSL
Sbjct: 72 DGEWFMDVFHVTDQNGNKLSEDDVAERIQQSL 103
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DE++K V+RMN PRV +DN TL+KVDSA + G LLE VQVL D+NL I++AYISS
Sbjct: 12 DEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYISS 71
Query: 71 DGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
DG +FMDVFHVTD +GNKL+++ V I+QSL
Sbjct: 72 DGEWFMDVFHVTDQHGNKLSEDDVAERIQQSL 103
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 109/194 (56%), Gaps = 45/194 (23%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVK--------VDSARRHGILLEAVQVLTDLNL 61
+DE+EKLVIRMN PRV +DN TATLVK VDSA ++G LLE VQVLT+L L
Sbjct: 11 VDEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKL 70
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG------ 115
IK+AYISSDG +FMD + NKL D VI IE SL S SF
Sbjct: 71 TIKRAYISSDGEWFMDGW-------NKLYDGLVIDRIELSLGA----GSLSFRAPPERSV 119
Query: 116 ---------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCN 166
TA+EL G DR GLLSEVFAVL DL+C++V ++ + Y++ +
Sbjct: 120 ELEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEEY----------YIRHLD 169
Query: 167 SGSPIEDSQQIDRI 180
SP+ + DR+
Sbjct: 170 D-SPVTSGDERDRL 182
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
R G+L E VLTDL I +SS+ +++ L+ + +T + + LE
Sbjct: 139 RPGLLSEVFAVLTDLKCNI----VSSE------EYYIRHLDDSPVTSGDERDRLGRCLEA 188
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
R+ GL LEL DRVGLLS+V + + SV A+V T R A++ YV
Sbjct: 189 AIQRRNT--EGLR-LELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVV- 244
Query: 165 CNSGSPIE 172
SG P+E
Sbjct: 245 AASGEPVE 252
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 16/148 (10%)
Query: 154 GRIASLIYVKDCNSGSPI----------EDSQQIDRIEARLRNVLKGDNDI--RSAKMTV 201
G+I ++ + +G P+ D++++ RIEA L ++L GD+ SA TV
Sbjct: 68 GKITIGLFGDEVPAGPPLGCLVFLRNEEADTERMARIEAHLGHLLHGDSSSVGGSAVATV 127
Query: 202 SMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
A V H ERRLHQ+M DRD E ++ P V+VQ+ +R YSVV VQC+ R KL
Sbjct: 128 PAASVAHAERRLHQLMSPDRDQEERAT---TSPRPAVSVQSCVERGYSVVTVQCRYRPKL 184
Query: 261 LFDVVCTLTDMEYVVFHATINTAGERAY 288
L DVVCTLTDM+YVVFH+TI+T G++A+
Sbjct: 185 LLDVVCTLTDMDYVVFHSTIDTTGDQAH 212
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 82/129 (63%), Gaps = 13/129 (10%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD-VFHVTD 83
V IDN C TL+KVDS + GILLE VQ+L DL+L+I KAY+SSDG +FMD VFH TD
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 84 LNGNKLTDESVISYIEQSLETIHY---------GRS---NSFNGLTALELTGTDRVGLLS 131
GNK+TD I YIE+ L + G+ +S TA+ELTG DR GLLS
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVFAVLADL 140
E+ AVLA L
Sbjct: 121 EISAVLAGL 129
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 156 IASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
+AS++Y+ D +G I+D ++ +I+ L VLKGD D +SA VS+ TH +RRLHQ+
Sbjct: 1 MASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQL 60
Query: 216 MFADRDYERMPVLRHST---DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
M+ADRDY+ ST + +VTV + D+ Y+VVN++C DR KLLFD VCTLTDM+
Sbjct: 61 MYADRDYDVDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQ 120
Query: 273 YVVFHATINTAGERAY 288
YVV+H T+ G AY
Sbjct: 121 YVVYHGTVIAEGPEAY 136
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +D+ + T+V + R +L + V LTD+ ++ + ++G +++ +
Sbjct: 85 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 144
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+G+ ++ E+ + LE R + G+ LEL G DRVGLLS+V + + SV
Sbjct: 145 DGSPISSEAERQRVIHCLEAAV--RRRTSEGI-KLELCGEDRVGLLSDVTRIFRENGLSV 201
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
A+V T + ++ YV D SG+P++ S+ I+ + +
Sbjct: 202 NRAEVTTRGSQAMNVFYVTDV-SGNPVK-SETIETVRKEI 239
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN 192
+FAVL+DL C VV+AK+WTHNGR+A +IY++D +SG+PI DSQ+I +IE L+NVL DN
Sbjct: 1 MFAVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDN 60
Query: 193 DIRSAKMT-VSM-AVTHTERRLHQMMFADRDYER 224
D+ SA T VSM ++ H E RLHQ+MF RDYER
Sbjct: 61 DVNSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
L EYE L +R++ P VVIDN T++ +DSA R G L+E VQ LT+L L I+ A
Sbjct: 41 GTLLEYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCAR 100
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQ--SLETIHYGRSNSFNGLTALELTGTD 125
ISSDG +F+D F VT+ K+ D+ I+ I + S+ET + T EL G D
Sbjct: 101 ISSDGGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDKELCTVFELAGRD 160
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ V +L C V+ A VWT + R+A +I + G+P+ D ++DR+E L
Sbjct: 161 RHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATE--RGAPVVDPPKLDRLEQILY 218
Query: 186 NVLKGDNDIRSAKM 199
++L G + + +++M
Sbjct: 219 DMLGGGDAVVNSEM 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
V +Q+ +Y +V ++C+DR KL FD VCTL DM Y ++HATI++ G+ A
Sbjct: 551 VRIQHSTLLNYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAA 601
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 179 RIEARLRNVLKGDNDI--RSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L GD+ SA TV A V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YVVFH+TI+T G++A+
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAH 112
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG-RSNSFNGLTALELTGTDRVGLLSEV 133
FMDVFHVTD G KLT++SVI+YIEQSL + R + GLTALELTG R GL+SEV
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGMWNGPTRPMALEGLTALELTGAGRTGLISEV 85
Query: 134 FAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
FAVLAD+ C VVE + W H + LI++++ + D++++ RIEA
Sbjct: 86 FAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIEA 129
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDY-------PVVTVQNWADRSYSVVNVQCK 255
M TH +RRLHQM+FADRDYER V + D P + ++ ++ YS V+V+CK
Sbjct: 27 MGSTHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCK 86
Query: 256 DRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
DR KL+FD+VCTLTDM+YVVFHATI++ G A
Sbjct: 87 DRAKLMFDIVCTLTDMQYVVFHATISSEGPYA 118
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ I+ + V V R ++ + V LTD+ ++ A ISS+G + + +
Sbjct: 66 PKIEIERCGEKGYSAVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIR 125
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G L E + + +E R + +LEL DRVGLLSEV +L +
Sbjct: 126 HMDGCTLDTEGEKERVTKCIEAAIQRRVSEG---VSLELCAKDRVGLLSEVTRILREHGL 182
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T + ++ YV+D G+P++
Sbjct: 183 TVCRAGVSTVGEKGLNVFYVRDA-YGNPVD 211
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
L EYE L +R++ P VVIDN T++ +DSA R G L+E VQ LT+L L I+ A
Sbjct: 41 GALLEYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCAR 100
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGT 124
ISSDG +F+D F VT+ KL D I+ I + L ++ S S+ T EL G
Sbjct: 101 ISSDGGWFVDEFFVTETPKGKLLDPRKINIIRKVL-SVESDSSASYKDKDICTVFELAGR 159
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+ V +L C V+ A VWT + R+A +I + G+P+ D ++DR+E L
Sbjct: 160 DRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATE--RGAPVVDPVKLDRLEQIL 217
Query: 185 RNVLKGDND 193
++L G D
Sbjct: 218 YDML-GSGD 225
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
V +Q+ A +Y +V +QC+DR KL FD VCTL DM Y ++HATI++ G+ A
Sbjct: 610 VRIQHSALLNYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAA 660
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 44/241 (18%)
Query: 16 LVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF 75
L +R++ P + IDN T V +DSA R G L+ VQ T+L+L I A ISSDG +F
Sbjct: 460 LELRVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWF 519
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLE---------TIHYGRSNSFNGL--TALELTGT 124
+DVFH+++ NG K+ + + I+Q L ++ ++ N + T EL G
Sbjct: 520 VDVFHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGP 579
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR GLL+EV +L C+V A VWT+ GR+A ++ + + G P+ D ++ R+ +
Sbjct: 580 DRPGLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLV 637
Query: 185 RNVLK---GDND-----------------------IRSAKMTVSMAVTHTERRLHQMMFA 218
++ G +D IR + + H +RRLHQ+M
Sbjct: 638 LGIMTRRPGPSDSNGALAAMGGGGLGPGSAGVIVNIRKVRGEI-----HHDRRLHQLMLQ 692
Query: 219 D 219
+
Sbjct: 693 E 693
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Query: 207 HTERRLHQMMFADRDYE-RMPVLRHSTDYP----VVTVQNWADRSYSVVNVQCKDRTKLL 261
HTERRLHQ+M+ADRDY+ P S+ YP +VTV+N +++ Y+ VN++C DR KLL
Sbjct: 1 HTERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAY 288
FD VCTLTDM+YVV+HAT+ G AY
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAY 87
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V ++N T V + A R +L +AV LTD+ ++ A + ++G + +
Sbjct: 33 TPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQEYFI 92
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
++G ++ E+ + LE R++ G+ LEL DR+GLLS+V + +
Sbjct: 93 RHIDGCPISSEAERQRLIHCLEAAIKRRTS--EGIR-LELCSEDRIGLLSDVTRIFRENG 149
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D +SG P++
Sbjct: 150 LSVTRAEVTTRGSQAVNVFYVID-SSGYPVK 179
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 179 RIEARLRNVLKGDNDIRSAKMTVSM---AVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L+GD+ S ++ +V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLRGDSSSVSGSAVATVPATSVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY 288
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YVVFH+TI+T G++A+
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAH 112
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Query: 207 HTERRLHQMMFADRDYERMPV-LRHSTDYP----VVTVQNWADRSYSVVNVQCKDRTKLL 261
HTERRLHQMM+ADRDY+ + S+ YP +VTV+N +++ Y+ VN++C DR KLL
Sbjct: 1 HTERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLL 60
Query: 262 FDVVCTLTDMEYVVFHATINTAGERAY 288
FD VCTLTDM+YVV+HAT+ G AY
Sbjct: 61 FDAVCTLTDMQYVVYHATVIAEGPEAY 87
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V ++N T V + A R +L +AV LTD+ ++ A + ++G + +
Sbjct: 33 TPLVTVENCSEKGYTAVNLRCADRPKLLFDAVCTLTDMQYVVYHATVIAEGPEAYQEYFI 92
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQ 141
++G ++ E+ + LE R++ G+ LEL DRVGLLS+V + +
Sbjct: 93 RHIDGCPISSEAERQRLIHCLEAAIKRRTS--EGIR-LELCSEDRVGLLSDVTRIFRENG 149
Query: 142 CSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
SV A+V T + ++ YV D +SG P++
Sbjct: 150 LSVTRAEVTTRGSQAVNVFYVID-SSGYPVK 179
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 15/128 (11%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
+++ SA +HGILL+ VQVL D +LLI KAYISSDG + MDVFHVTD +GNK+TDE +I +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 98 IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
I+Q T LEL TD++G LS+ + + SV A + + + +
Sbjct: 61 IQQG---------------TRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGV 105
Query: 158 SLIYVKDC 165
+ YV D
Sbjct: 106 DVFYVTDV 113
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLET-IHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
MDVFHVTD G KLTD SVI+YI+QSL T + + GLTALELTG R GLLSEVF
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAAAPPEGLTALELTGPGRAGLLSEVF 60
Query: 135 AVLADLQCSVVEAKVW 150
AVLAD+QC V +A+ W
Sbjct: 61 AVLADMQCGVADARAW 76
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 31/121 (25%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQ---------------------------SLETIHY 107
FMDVFHVTD G KLT++SVI+YIEQ SL+++
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQSLGM 258
Query: 108 G----RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
R + GLTALELTG DR GL+SEVF VLAD+ C VVE + WTH + LI+++
Sbjct: 259 WNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFLR 318
Query: 164 D 164
D
Sbjct: 319 D 319
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Query: 215 MMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
MMFADRDYER+ D+ P VTV NW+D+ YSVV + KDR KLLFD VCTLT
Sbjct: 1 MMFADRDYERV----DDDDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLT 56
Query: 270 DMEYVVFHATINTAGERAY 288
DM+YVVFHA I+ G +AY
Sbjct: 57 DMQYVVFHANIDAEGPQAY 75
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V + N ++V + S R +L + V LTD+ ++ A I ++G +++
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
++G+ + ++ + Q LE R + GL LEL TDRVGLLS V + +
Sbjct: 82 HIDGSPVKSDAERQRVIQCLEAAIERRVS--EGL-KLELCTTDRVGLLSNVTRIFRENSL 138
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL---KGDNDIRSAKM 199
+V A+V T + + YV + + DS+ I+ I + N + KG D
Sbjct: 139 TVTRAEVTTKGDKAVNTFYV--SGASGYLVDSKTIESIRQAIGNTILKVKGTPD------ 190
Query: 200 TVSMAVTHTE---RRLHQMMFADRDY 222
+ TH + R L +F R +
Sbjct: 191 --ELKSTHQDSPTRSLFSGLFKSRSF 214
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Query: 179 RIEARLRNVLKGDNDI--RSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
RIEA L ++L GD+ SA TV A V H ERRLHQ+M DRD E ++ P
Sbjct: 3 RIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQEERAT---TSPRP 59
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYV 274
V+VQ+ +R YSVV VQC+ R KLL DVVCTLTDM+YV
Sbjct: 60 AVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYV 98
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSE+FAVLAD +C+VV ++VWTHN R+AS++Y+ D +G PI+D ++ IE
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 RLRNVLKGDNDIRSAKMTVSMA 204
L +VL GD D RSA VS+
Sbjct: 61 LLLSVLMGDRDKRSANTAVSVG 82
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
G DR GLLSE+FAVL D +C+VV ++VWTHN R+AS++Y+ D +G PI+D ++ IE
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 RLRNVLKGDNDIRSAKMTVSMA 204
L +VL GD D RSA VS+
Sbjct: 61 LLLSVLMGDRDKRSANTAVSVG 82
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG-RSNSFNGLTALELTGTDRVGLLSEV 133
FMDVFHVTD G KLT++SVI+YIEQSL + R + GLTALELTG R GL+SEV
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLGMWNGPTRPMALEGLTALELTGAGRTGLISEV 146
Query: 134 FAVLADLQC 142
FAVLAD+ C
Sbjct: 147 FAVLADMDC 155
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 38/150 (25%)
Query: 78 VFHVTDLNGNKLTDESVISYIEQSLETIHY---------------------GRSNSFNG- 115
VF V D +GNK+ D V+ YI++ H+ R S G
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 116 ----------------LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL 159
T++EL GTDR GLLSEV AVL DL C+VV A++WTHN R A++
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 160 IYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
I+V D ++ S I D ++ I+ L NVL+
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVLE 150
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 30 AVCPTA--TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN 87
V PT T +++ R G+L E VLTDL+ + A I + V HVTD + +
Sbjct: 70 GVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTH 129
Query: 88 K-LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+TD +S I++ L LEL+ DRVGLLS++ + ++V
Sbjct: 130 SAITDPIRLSTIKELL-------------CNVLELSAEDRVGLLSDITRTFRENSLTIVR 176
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIE 172
A++ T G+ YV D +G+P+E
Sbjct: 177 AEISTREGKAKDTFYVTDV-TGNPVE 201
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 68 ISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG------RSNSFNGLTALEL 121
I SDGR+F+ + + ++ S + + + G R + GLTALEL
Sbjct: 58 IWSDGRWFIRSW-TSSMSPTASVASSPTTASSPTSSRLSLGMWNGPTRPMALEGLTALEL 116
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
TG R GL+SEVFAVLAD+ C VVE + W H + LI++++ + D++++ RIE
Sbjct: 117 TGAGRTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNEET-----DTERMARIE 171
Query: 182 A 182
A
Sbjct: 172 A 172
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 15/68 (22%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS 70
DEY+K + MN PRV IDN CP+A + + VLT+L L++ KAYISS
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIV---------------IHVLTNLKLIVTKAYISS 69
Query: 71 DGRFFMDV 78
DG +FMDV
Sbjct: 70 DGGWFMDV 77
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV +DN + T+++V+ R G+L + ++DLNL I+ A+IS+ G +DVF+VT
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T E+ I IE L+ +
Sbjct: 896 DLIGTKITSETRIERIEVRLKRV 918
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N LT +E+ G DR GLLS+V ++DL + A + T+ ++ + YV D G+ I
Sbjct: 846 NQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDL-IGTKITS 904
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+I+RIE RL+ V + S+ + +S
Sbjct: 905 ETRIERIEVRLKRVFESPEGEMSSPVVMS 933
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 29/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R++ F +T + + D LLS + A ++ +A+++T + A + + +
Sbjct: 731 RTDRFREVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDVMLLNREFE 790
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
S ++ ++ +RI A + +L+G R + + A+R R P
Sbjct: 791 SDEDEIRRAERICANIGKLLQG-------------------REMPASLLANR---RPP-- 826
Query: 229 RHSTDY----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
ST+ P V+V N +V+ V+ DR LL DV ++D+ + A I+T G
Sbjct: 827 -RSTELFAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYG 885
Query: 285 ER 286
E+
Sbjct: 886 EK 887
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 56/83 (67%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P++ +DN++ T+++V+ R G+L + ++DL+L I+ A+IS+ G +D F+VT
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T E+ I+ IE+ L+++
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSV 939
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N +T +E+ G DR GLL+++ ++DL + A + T+ +I YV D G+ +
Sbjct: 867 NRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDL-IGAKVTS 925
Query: 174 SQQIDRIEARLRNVLK 189
+I RIE RL++VL+
Sbjct: 926 EAKIARIERRLQSVLE 941
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQ 175
T + + TD GL S++ +A +VV+AK+ T +G +V+D N G DS
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTN-GEAFNDST 785
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
++DR+ L V+ G IR ++ ERR + + R V + P
Sbjct: 786 KLDRLRDTLEKVISGQ--IRPSQ--------EIERRQTK-----DNKHRTAVFKVE---P 827
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
V + N A R+++V+ + +DR LL+D+ L D+ + A I+T GERA
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERA 879
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T T++++ + R G+L + + L DL++ I A IS+ G +DVF+V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ + ++++L
Sbjct: 887 DVFGLKIDSRTKFVQVKETL 906
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 35/190 (18%)
Query: 35 ATLVKVDSARRHGIL--LEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE 92
AT + V + G+ + L N++ K +DG +D F V D NG D
Sbjct: 726 ATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADG-MALDTFFVQDTNGEAFNDS 784
Query: 93 SVISYIEQSLETIHYGR-------------------------------SNSFNGLTALEL 121
+ + + +LE + G+ + + T +E+
Sbjct: 785 TKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEPNVIIDNKASRTHTVIEI 844
Query: 122 TGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
T DR+GLL ++ L DL + A++ T R + YVKD G I+ + +++
Sbjct: 845 TARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKDV-FGLKIDSRTKFVQVK 903
Query: 182 ARLRNVLKGD 191
L ++ D
Sbjct: 904 ETLTQAIRND 913
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 22/188 (11%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD GL S++ +A +VV+AK+ T +G +++D N G D ++D++
Sbjct: 738 TDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTN-GEAFNDKSKLDKLRK 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
L V+ G ++ S + ERR D + R V + P V + N
Sbjct: 797 TLEQVISG-------RLRPSQEI---ERR----QIKDNKH-RTAVFKVE---PNVIIDNK 838
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYCC 302
A R+++V+ + +DR LL+DV TL D+ + A I+T GERA V Y D
Sbjct: 839 ASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVF--YVKDVFGLK 896
Query: 303 IYSAFKFL 310
I S KFL
Sbjct: 897 IDSRTKFL 904
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T T++++ + R G+L + + L DL+L I A IS+ G +DVF+V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 83 DLNGNKLTDESVISYIEQSL-ETIHYG 108
D+ G K+ + ++++L +T+ G
Sbjct: 891 DVFGLKIDSRTKFLQVKETLTQTLENG 917
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 32/137 (23%)
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR---------- 109
N++ K +DG +D F + D NG D+S + + ++LE + GR
Sbjct: 757 NVVDAKILTLADG-MALDTFFIQDTNGEAFNDKSKLDKLRKTLEQVISGRLRPSQEIERR 815
Query: 110 ---------------------SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
+ + T +E+T DR GLL +V L DL + A+
Sbjct: 816 QIKDNKHRTAVFKVEPNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASAR 875
Query: 149 VWTHNGRIASLIYVKDC 165
+ T R + YVKD
Sbjct: 876 ISTFGERAVDVFYVKDV 892
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + Q ++D L I A+I++ G +DVF+V
Sbjct: 886 PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVK 945
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TDE + I ++L
Sbjct: 946 DLFGLKITDERRLGEIREAL 965
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S + LA S+V+A++ T NG +++D G E+
Sbjct: 784 GVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDA-GGEAFEE 842
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ A + L G DI K VS RR+ + +P
Sbjct: 843 PHQLARLSALVEQALSGRVDI--PKEIVSAGRMRYGRRMRAI--------HVP------- 885
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +Y+V+ + +DR LL DV ++D + + A I T G RA
Sbjct: 886 -PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRA 938
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V ++D + + A + T+ R + YVKD G I D
Sbjct: 896 NTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 954
Query: 174 SQQIDRIEARLRNVLK 189
+++ I L + L+
Sbjct: 955 ERRLGEIREALLHGLR 970
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + Q ++D L I A+I++ G +DVF+V
Sbjct: 887 PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVK 946
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TDE + I ++L
Sbjct: 947 DLFGLKITDERRLGEIREAL 966
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S + LA S+V+A++ T NG +++D G E+
Sbjct: 785 GVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDA-GGEAFEE 843
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ A + L G DI K VS RR+ + +P
Sbjct: 844 PHQLARLSALVEQALSGRVDI--PKEIVSAGRMRYGRRMRAI--------HVP------- 886
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +Y+V+ + +DR LL DV ++D + + A I T G RA
Sbjct: 887 -PRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRA 939
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V ++D + + A + T+ R + YVKD G I D
Sbjct: 897 NTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 955
Query: 174 SQQIDRIEARLRNVLK 189
+++ I L + L+
Sbjct: 956 ERRLGEIREALLHGLR 971
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T+V+V+ R G+L + LT LNL I A +++ G +DVF+V
Sbjct: 849 PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVK 908
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E+ ++ I Q+L
Sbjct: 909 DVFGLKVTHEAKLTQIRQAL 928
Score = 40.4 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL V L L + AKV T+ + YVKD G + +
Sbjct: 862 TVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKDV-FGLKVTHEAK 920
Query: 177 IDRIEARLRNVLKG-DNDIRSAK 198
+ +I L + L D D R+AK
Sbjct: 921 LTQIRQALLDALADPDTDARTAK 943
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID + AT+++V A R G+L E + L+D L I+ A+++ G +D F+VT
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
D G K+T E+V+ + +LE +
Sbjct: 829 DARGRKITSEAVLDEVHAALEAV 851
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G T +E++G DR GLL+E+ L+D S+ A V R YV D G
Sbjct: 775 PSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDAR-GR 833
Query: 170 PIEDSQQIDRIEARLRNVL 188
I +D + A L VL
Sbjct: 834 KITSEAVLDEVHAALEAVL 852
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDNA T+++++ R G+L + + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + +++I SL
Sbjct: 911 DLLGMKITDAARLAHIRASL 930
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D + G ED
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAD-GCSFED 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH-TERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G D+ +S A RR+ + +P
Sbjct: 808 PHQLGRLNHLVEQALSGRLDLEKG---ISEARHRGASRRMRAI--------HVP------ 850
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ + +DR+ LL D+ TL+ + A I T G RA
Sbjct: 851 --PRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRA 903
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 33/150 (22%)
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVIS----YIEQSL-----------ETIHYGRSNSFN 114
SDG +D F V D +G D + +EQ+L E H G S
Sbjct: 787 SDG-MALDTFWVQDADGCSFEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMR 845
Query: 115 GL----------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIAS 158
+ T +E+ G DR GLL ++ L+ + A + T+ R
Sbjct: 846 AIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVD 905
Query: 159 LIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+ YV+D G I D+ ++ I A L + L
Sbjct: 906 VFYVRDL-LGMKITDAARLAHIRASLLDTL 934
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHG-ILLEAVQVLTDLNLLIKKAYISSDG 72
E++ + +V IDN T+VKVDS +HG +LL+ + VLTD+N I K+YISSD
Sbjct: 19 ERIYMVHRNCQVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSDE 78
Query: 73 RFFMDVFHVTDLNGNKLT----DESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVG 128
F + +NG L E +I +IE ++E LEL+ + VG
Sbjct: 79 YF------IRHINGYALNTTSEKEQLIKFIEAAIE-------RRVCESVKLELSADNSVG 125
Query: 129 LLSEVFAVLADLQCSVVEA 147
LS++ VL + +V A
Sbjct: 126 FLSDISRVLRENSLVIVRA 144
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + LT+L L I A IS+ G +DVF+V
Sbjct: 847 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVK 906
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T ES ++ I + L
Sbjct: 907 DVFGLKVTHESKLAQIRERL 926
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 32/186 (17%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 739 RIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAG 798
Query: 168 GSPIEDSQQIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
G E ++ ++ + VL G D R A V H
Sbjct: 799 GGAFESGDKLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHVP------------ 846
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
P V + N A +++V+ V +DR LL+D+ LT++ + A I+
Sbjct: 847 -------------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKIS 893
Query: 282 TAGERA 287
T GE+A
Sbjct: 894 TYGEKA 899
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR+ IDN + AT ++ S R G+L++ +Q+ D N+ ++ A IS+ G D+F +T
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL K+ D + +E L I
Sbjct: 827 DLKNKKVKDTKTLKTLEDQLLKI 849
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I NA+ T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 830 TPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G+K+T E+ I L+ + G
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAG 916
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI SN F T +E+ G DR GLLSEV AVL+DL + A + T ++ YV
Sbjct: 834 TISNALSNKF---TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLH 213
D +++Q++ I ARL+ VL G+ D +M +A T R H
Sbjct: 891 DLVGSKITSENRQMN-IAARLKAVLAGEVDEARERMPSGIIAPTPVPRASH 940
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
R T P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 825 RAFTVTPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEK 882
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR+ IDN + T ++ S R G+L++ +Q+ D N+ ++ A IS+ G D+F +T
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL K+ D ++ +E L I
Sbjct: 827 DLKNKKIKDTKILKTLEDQLLKI 849
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S++ +A ++++AK+ T + A I+ G IE ++I R+ +
Sbjct: 735 DHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAIEKEERIARLAKTV 794
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHSTDYPVVTVQNWA 243
R+VL GD + A R R+P RH T P V V N A
Sbjct: 795 RDVLTGDLPLEKA--------------------LRRQPPRLPERTRHLTVPPRVIVDNQA 834
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
++++V+ + +DR L+ V LTD+ + A ++T GER
Sbjct: 835 SKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGER 877
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T T+++++ R G L + LTD+ + I A +S+ G +D F+V
Sbjct: 826 PRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSLE 103
D+ G K+ + ++ I ++LE
Sbjct: 886 DVFGMKIVHRAKLAQIREALE 906
Score = 38.1 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 56 LTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR------ 109
L +N+L K SDG +D+F V L G+ + E I+ + +++ + G
Sbjct: 749 LAGVNILDAKITTMSDGGA-LDIFTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKA 807
Query: 110 ------------------------SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVV 145
+ + T +E+ G DR G L V L D+ +
Sbjct: 808 LRRQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQIS 867
Query: 146 EAKVWTHNGRIASLIYVKD 164
A+V T+ R+ YVKD
Sbjct: 868 SARVSTYGERVVDSFYVKD 886
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++D+ TAT+V+V A R G+L +V +D L I+ A+++S G +D F+V
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
D G K+T E I+ + +LE + R+ + G
Sbjct: 836 DGKGRKITSEQRIAELRTALEAVLDSRAPAPEG 868
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TPRV I+N + T+++V+ R G+L E V++DL+L I A++++ G +DVF+V
Sbjct: 833 TPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYV 892
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+++T+ + S I + L
Sbjct: 893 TDLVGHQITNTTRQSRIRKKL 913
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR G+LSE+ V++DL + A V T ++ + YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDL-VGHQITN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAK 198
+ + RI +L L G+ DI +A+
Sbjct: 903 TTRQSRIRKKLL-ALFGEGDIITAQ 926
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + LT+L L I A IS+ G +DVF+V
Sbjct: 845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVK 904
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E+ ++ I + L
Sbjct: 905 DVFGLKVTHENKLAQIRERL 924
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 32/186 (17%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 737 RIDRGRAITEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAG 796
Query: 168 GSPIEDSQQIDRIEARLRNVLKG------DNDIRSAKMTVSMAVTHTERRLHQMMFADRD 221
G E ++ ++ + VL G D R A V H
Sbjct: 797 GGAFESGDKLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHVP------------ 844
Query: 222 YERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
P V + N A +++V+ V +DR LL+D+ LT++ + A I+
Sbjct: 845 -------------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKIS 891
Query: 282 TAGERA 287
T GE+A
Sbjct: 892 TYGEKA 897
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 852 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 911
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ + I L+ + G
Sbjct: 912 TDLVGAKITNENRQANIAARLKAVLAG 938
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SN+ N T +E+ G DR GLLSEV AVL+DL + A + T ++ YV D G
Sbjct: 858 SNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VG 916
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTER 210
+ I + + I ARL+ VL G+ D +M +A H R
Sbjct: 917 AKITNENRQANIAARLKAVLAGEVDEARERMPSGIIAPAHPPR 959
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEK 904
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 5 EWPACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK 64
+ PA K + P V++D+ TAT+V+V A R G+L +V +D L I+
Sbjct: 5 KAPAPAGNARKAAFEVR-PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIR 63
Query: 65 KAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
A+++S G +D F+V D G K+T E ++ + +LE + R+ + G
Sbjct: 64 SAHVASYGERAVDSFYVVDRKGRKITSEQRVAELRAALEAVLDSRAPAPEG 114
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V IDNA T++++++ R G+L L DL+L I A+I++ G F+D F+V
Sbjct: 859 TPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYV 918
Query: 82 TDLNGNKLTDE 92
TDL G+K+ +E
Sbjct: 919 TDLVGSKILNE 929
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGN------KLTDE-SVISYIEQ----SLETIHYGRSN 111
+++A ++ DG D H+ DL+ + +L D+ +I + S+ + +
Sbjct: 700 LREALLAEDG---TDAAHIADLHYDNYLLSVELPDQIRHAKFIAETDAASIPVATHIATR 756
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSP 170
+F +T + L D LLS + V A ++ +A+++T +GR I+V P
Sbjct: 757 NFEAITEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKDGRALDSIFVGRLYD-DP 815
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ ++ I + VL+G E+RL ++ P R
Sbjct: 816 DDEKRRARNIADTIEKVLRG------------------EKRLSEL----ESQAGKPARRQ 853
Query: 231 S--TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
T P VT+ N A ++V+ ++ DR+ +L + TL D+ + A I T GE+
Sbjct: 854 QAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEK 911
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI SN F T +EL DR G+LS + LADL + A + T+ + YV
Sbjct: 863 TIDNAASNKF---TVIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVT 919
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLK 189
D GS I + +++D A L VL+
Sbjct: 920 DL-VGSKILNEERLDIARATLLEVLE 944
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E+
Sbjct: 794 GVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYEE 852
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI A + MP+ +R
Sbjct: 853 THKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAIH 893
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA
Sbjct: 894 VPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 900 IDNGISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKD 956
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 957 L-FGLKITDKKRLEEIRERLLAGLK 980
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + L++L L I A IS+ G +DVF+V
Sbjct: 841 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVK 900
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E ++ I++ L
Sbjct: 901 DVFGLKVTHEGKLAKIKERL 920
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D +
Sbjct: 734 RVDRGRAVTEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDA-A 792
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G E S ++ ++ + VL G K +A T +F +P
Sbjct: 793 GGAFESSDKLAKLSVMIEKVLSG-----QLKPLNDLATRRTSHASRTRVF------HVP- 840
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +++V+ V +DR LL+D+ L+++ + A I+T GE+A
Sbjct: 841 -------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKA 893
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSF 113
DL G K+++E+ +YI L+ + G +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVMAGEEDEM 916
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 831 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VG 889
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKM 199
I + + I ARL+ V+ G+ D +M
Sbjct: 890 QKISNENRRAYITARLKAVMAGEEDEMRERM 920
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEK 877
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SN+ N T +E+ G DR GLLSE+ AVL+DL + A + T ++ YV D G
Sbjct: 852 SNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDL-VG 910
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLH 213
+ I + + I ARL+ VL G+ D +M +A H+ R H
Sbjct: 911 AKITNENRQGNIAARLKAVLAGEVDEARERMPSGIIAPAHSPRSSH 956
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 846 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYV 905
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ I L+ + G
Sbjct: 906 TDLVGAKITNENRQGNIAARLKAVLAG 932
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N ++V+ V+ DRT LL ++ L+D+ + A I T GE+
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEK 898
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSF 113
DL G K+++E+ +YI L+ + G +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMAGEEDEM 939
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKM 199
I + + I ARL+ V+ G+ D +M
Sbjct: 913 QKISNENRRAYITARLKAVMAGEEDEMRERM 943
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEK 900
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+V
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSF 113
DL G K+++E+ +YI L+ + G +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVMAGEEDEM 939
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKM 199
I + + I ARL+ V+ G+ D +M
Sbjct: 913 QKISNENRRAYITARLKAVMAGEEDEMRERM 943
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEK 900
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TPRV+IDN T T+++V + R G+L VL+DL L I A++++ G +D F+V
Sbjct: 824 TPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYV 883
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G K+T + ++ + + L
Sbjct: 884 KDVFGLKITHQGKLTRVREEL 904
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK-VWTHNGRIASLIYVKDCNSG 168
+ F + A+ + D GL + V +A ++V+A+ V T +G +V+D +
Sbjct: 720 PDRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDR- 778
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
S +D ++ R+ + L G+ +R AK + A RD + +
Sbjct: 779 SAYDDEVRVARMRDLVGRTLSGE--LRPAKA----------------LAARRDGPKRTDV 820
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
T P V + N A + +V+ V +DR LLF + L+D+ + A + T GERA
Sbjct: 821 FQVT--PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERA 877
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+T DR GLL + +VL+DL ++ A V T+ R YVKD G I
Sbjct: 835 NTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDV-FGLKITH 893
Query: 174 SQQIDRIEARL-------RNVLKGDNDIRS 196
++ R+ L V+ D IRS
Sbjct: 894 QGKLTRVREELLAALDAAGPVIADDGTIRS 923
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 830 TPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G+K+T E+ I L+ + G
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAG 916
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SN+ N T +E+ G DR GLLSEV AVL+DL + A + T ++ YV D
Sbjct: 836 SNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGS 895
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKM 199
+++Q++ I ARL+ VL G+ D +M
Sbjct: 896 KITSENRQMN-IAARLKAVLAGEVDEARERM 925
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
R T P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 825 RAFTVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEK 882
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T NG + +++D + +D
Sbjct: 759 GVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDA-AQDVFDD 817
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQ----MMFADRDYERMPVLR 229
+++RI + L G DI E+RL + M++ R +R
Sbjct: 818 PHRLERIIELINTALAGTVDI--------------EKRLQECNRHMLYGRR-------MR 856
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL+DV T+ + + + A I T G RA
Sbjct: 857 AIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRA 914
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + + + + L I A+I++ G +DVF+V
Sbjct: 862 PRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVK 921
Query: 83 DLNGNKLTD--------ESVISYIEQSLETIHYGRSNSFNGLTALELT 122
D+ G K+ D E+++ +E+ E I + NS + +E+T
Sbjct: 922 DVFGLKVQDRKRLSIVREAILKVLEEVEENITGIQPNSTASIVQMEVT 969
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
NG T +E+ G DR+GLL +V + + + + A + T+ R + YVKD G ++D
Sbjct: 872 NGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVKDV-FGLKVQD 930
Query: 174 SQQIDRIEARLRNVLK 189
+++ + + VL+
Sbjct: 931 RKRLSIVREAILKVLE 946
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D G E+
Sbjct: 754 GVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQD-GEGCSFEE 812
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH-TERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G DIR + A H T RR+ + +P
Sbjct: 813 PHQLGRLNHLVEQALSGRLDIRKG---IEDASHHSTSRRMRAI--------HVP------ 855
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL DV L+ + A I T G RA
Sbjct: 856 --PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRA 908
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + L+ +L I A+I++ G +DVF+V
Sbjct: 856 PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVR 915
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD ++ + ++L
Sbjct: 916 DLLGMKITDPVRLARLRETL 935
Score = 37.4 bits (85), Expect = 9.6, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL +V + L+ + A + T+ R + YV+D G I D +
Sbjct: 869 TVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRDL-LGMKITDPVR 927
Query: 177 IDRIEARLRNVL 188
+ ARLR L
Sbjct: 928 L----ARLRETL 935
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 867 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 926
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I +L
Sbjct: 927 DLFGLKITDKGRLDRIRTTL 946
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 26 VIDNAVCPTATLVKVDSARRHGI--LLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
V++ ++ T V+V+ A+ L+E TD+ + Y G +++ H T
Sbjct: 682 VLEGSLATTERDVRVERAKAATAQWLMEDGMNETDVQHFMGLGY----GSYWLSFDHDTH 737
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L ES + ++ET + G+T + + D GL S++ +A S
Sbjct: 738 ARHARLISESERMHSPLTVET----QPLPARGVTEVTIYAADHPGLFSKIAGAVAIAGAS 793
Query: 144 VVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G ++ ++
Sbjct: 794 IVDARIHTMTNGMALDTLWIQDA-GGAAFEEPQQLARLSLLVEQALTG-------RININ 845
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
+ RRL RM + P V + N A + +VV + +DR LL
Sbjct: 846 REIAQCGRRLSG--------RRMRAIHVP---PRVVIDNRASNTCTVVEINGRDRPGLLH 894
Query: 263 DVVCTLTDMEYVVFHATINTAGERA 287
DV L++ + + A I T G RA
Sbjct: 895 DVTAALSEQKLQIASAHITTYGVRA 919
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V A L++ + + A + T+ R + YVKD G I D
Sbjct: 877 NTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 935
Query: 174 SQQIDRIEARL 184
++DRI L
Sbjct: 936 KGRLDRIRTTL 946
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+++++ R G+L + +++ NL I A+I++ G +DVF+V
Sbjct: 883 PRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVK 942
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I L
Sbjct: 943 DLFGLKITDKKRLDEIRDRL 962
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G+T + + D GL S++ LA S+V+A++ T +G +++D +GS E+
Sbjct: 781 GVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMHGMALDTFWIQD-TAGSAYEE 839
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHST 232
+ ++ R+ + + L G DI + A + MP+ +R
Sbjct: 840 THRLARLSSLIEQALSGQLDIGTE-------------------IARAGFGHMPLRMRAIH 880
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +Y+V+ + +DR LL DV +++ + A I T G RA
Sbjct: 881 VPPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRA 935
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN++ T +E+ G DR GLL +V A +++ + A + T+ R + YVKD
Sbjct: 887 IDNGASNTY---TVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKD 943
Query: 165 CNSGSPIEDSQQIDRIEARL 184
G I D +++D I RL
Sbjct: 944 L-FGLKITDKKRLDEIRDRL 962
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+V+++ R G+L + ++D L I A+I++ G +DVF+V
Sbjct: 850 PRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVK 909
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD++ + I Q+L
Sbjct: 910 DLFGLKITDKARLETIRQTL 929
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIE 172
G+T + + D GL S + +A S+V+A++ T NG ++V+D + G+ E
Sbjct: 747 RGVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTNGMALDTLWVQDAD-GAAFE 805
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ QQ+ R+ + L G +I +K S + RR+ +
Sbjct: 806 EPQQLARLSMLVEQALSGQLNI--SKEIASCGRRGSGRRMRAIHVP-------------- 849
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A + +VV + +DR LL D+ T++D + + A I T G RA
Sbjct: 850 --PRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRA 902
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL ++ A ++D + + A + T+ R + YVKD G I D
Sbjct: 860 NACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 918
Query: 174 SQQIDRIEARL 184
+++ I L
Sbjct: 919 KARLETIRQTL 929
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 852 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 911
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I +L
Sbjct: 912 DLFGLKITDKGRLDRIRTTL 931
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G +++ H T +L ES + ++ET + G+T + + D GL S
Sbjct: 711 GSYWLSFDHDTHARHARLISESERVHSPLTVET----QPLPARGVTEVTIYAADHPGLFS 766
Query: 132 EVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
++ +A S+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G
Sbjct: 767 KIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDA-GGAAFEEPQQLARLSLLVEQALTG 825
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ ++ + RR+ RM + P V + N A + +VV
Sbjct: 826 -------HLNINREIAQCGRRVSG--------RRMRAIHVP---PRVVIDNRASNTCTVV 867
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ +DR LL DV L++ + + A I T G RA
Sbjct: 868 EINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRA 904
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V A L++ + + A + T+ R + YVKD G I D
Sbjct: 862 NTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDL-FGLKITD 920
Query: 174 SQQIDRIEARL 184
++DRI L
Sbjct: 921 KGRLDRIRTTL 931
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G+L + + L++L L I A +S+ G +DVF+V
Sbjct: 842 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVK 901
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T E ++ I++ L
Sbjct: 902 DVFGLKVTHEGKLAKIKERL 921
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R + +T + + TD GL S + LA +V+A+++T NG + V+D
Sbjct: 734 RVDRGRAVTEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAG 793
Query: 168 GSPIEDSQQIDRIEARLRNVLKGD----NDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
G E ++ ++ + VL G ND+ S + T + T R H
Sbjct: 794 GGAFESGDKLAKLSVMIEKVLSGQLKPLNDL-STRRTTQASRT---RVFH---------- 839
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+P P V + N A +++V+ V +DR LL+D+ L+++ + A ++T
Sbjct: 840 -VP--------PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTF 890
Query: 284 GERA 287
GE+A
Sbjct: 891 GEKA 894
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T T+++++ R G+L + ++ NL I A+I++ G +DVF+V
Sbjct: 896 PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVK 955
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + I + L
Sbjct: 956 DLFGLKITDKKRLEEIRERL 975
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIE 172
G+T + + D GL S++ LA S+V+A++ T +G +++D SG E
Sbjct: 793 RGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHGMALDTFWIQD-TSGQAYE 851
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV-LRHS 231
++ ++ R+ + + L G DI A + MP+ +R
Sbjct: 852 ETHKLARLASLIEQGLSGHIDISEE-------------------IARAGFGHMPMRMRAI 892
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N +Y+V+ + +DR LL DV ++ + A I T G RA
Sbjct: 893 HVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
G SN++ T +E+ G DR GLL +V A ++ + A + T+ R + YVKD
Sbjct: 903 GISNTY---TVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDL-F 958
Query: 168 GSPIEDSQQIDRIEARLRNVLK 189
G I D ++++ I RL LK
Sbjct: 959 GLKITDKKRLEEIRERLLAGLK 980
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SN+ N T +E+ G DR GLLSEV AVL+DL + A + T ++ YV D
Sbjct: 858 SNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGA 917
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTER 210
+++QI+ I ARL+ VL G+ D +M +A H R
Sbjct: 918 KITNENRQIN-IAARLKAVLAGEVDEARERMPSGIIAPAHPPR 959
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V + N + T+++V+ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 852 TPEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 911
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+T+E+ I L+ + G
Sbjct: 912 TDLVGAKITNENRQINIAARLKAVLAG 938
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N ++V+ V+ DRT LL +V L+D+ + A I T GE+
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEK 904
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN + T+++++ R G+L + L ++ L I A+I++ G +DVF+V
Sbjct: 883 PRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVK 942
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL+G K+TDE+ + I L
Sbjct: 943 DLSGMKVTDENRLKKIRDRL 962
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T + + D GL +++ +A S+V+A++ T NG ++++D +G ++
Sbjct: 780 GVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDA-TGEAFDE 838
Query: 174 SQQIDRIEARLRNVLKGDNDIRS--AKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++ + L G DI + AK S + R +H +P
Sbjct: 839 PHRLTKLFSITERALSGRLDIATEIAKTNASGQLLSRTRAIH-----------VP----- 882
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A S++V+ + +DR LL DV L +M ++ A I T G RA
Sbjct: 883 ---PRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRA 935
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V + L +++ + A + T+ R + YVKD SG + D
Sbjct: 893 NSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDL-SGMKVTD 951
Query: 174 SQQIDRIEARLRNVLK 189
++ +I RL LK
Sbjct: 952 ENRLKKIRDRLMAGLK 967
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T+++++ R G+L + + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + +++I SL
Sbjct: 911 DLLGMKITDPARLAHIRDSL 930
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D + G ED
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAD-GCSFED 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ + L G D+ K RR+ + +P
Sbjct: 808 PHQLGRLNHLVEQALSGRLDLE--KGIAEARHRGASRRMRAI--------HVP------- 850
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ + +DR LL D+ TL+ + A I T G RA
Sbjct: 851 -PRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRA 903
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ I NA+ T++++ R G+L + L+DLNL I A+I + G +DVF+VTDL
Sbjct: 838 IFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDL 897
Query: 85 NGNKLTDESVISYIEQSLETI 105
G K+T + I ++LE +
Sbjct: 898 TGGKITSKVRQKRIHEALEAV 918
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 26/180 (14%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+F G+T + D LLS + S++ A+++
Sbjct: 732 KAFEGITEVTFYTPDHPRLLSLIAGACTTADASIIGAQIFN------------------- 772
Query: 171 IEDSQQIDRIEARLRNVLKGDND--IRSAKMT-VSMAVTHTERRLHQMMFADRDYERMPV 227
+D +D RLR D D IR++++T + A+ + L + D Y R
Sbjct: 773 TKDGYALDTF--RLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADLGVDSRYNRR-- 828
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
L+ + + + N ++V+ + DRT LL+ + L+D+ + A I T GE+A
Sbjct: 829 LKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKA 888
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
T +E++G DR GLL + L+DL ++ A + T+ + + YV D G
Sbjct: 848 FTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG 900
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I NA+ ++V++ R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 83 DLNGNKLTDESVISYIEQS-LETIHYGRSNSFNG 115
DL G K+ + I ++ LET+ +G G
Sbjct: 892 DLTGQKIVSPDRLDAICRALLETLEHGVQRPAKG 925
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G I
Sbjct: 842 NRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGQKIVS 900
Query: 174 SQQIDRI 180
++D I
Sbjct: 901 PDRLDAI 907
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++V+ R G L Q LT + + I A IS+ G +DVF+V
Sbjct: 826 PRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D+ G K+ ++ ++ I ++LE
Sbjct: 886 DVFGMKVVHKTKLAQIREALEA 907
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S++ +A ++++A++ T +A + G PI + ++I+R+ +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS-TDYPVVTVQNWA 243
R VL G T+++A E+ R+P H+ T P V + N A
Sbjct: 795 RGVLTG---------TIALARALQEQ-----------APRLPERAHALTVPPRVLIDNQA 834
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
++++V+ V +DR L V LT + + A I+T GER
Sbjct: 835 SKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGER 877
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G+T L + D GL S++ LA S+V+A++ T +G +V+D G E+
Sbjct: 749 GVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDA-EGCSFEE 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH-TERRLHQMMFADRDYERMPVLRHST 232
Q+ R+ + L G DIR ++ A H RR+ + +P
Sbjct: 808 PHQLGRLNHLVEQALSGRLDIRQG---IAEASHHGLSRRMRAI--------HVP------ 850
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL DV L+ + A I T G RA
Sbjct: 851 --PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRA 903
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T+++V+ R G+L + L+ +L I A+I++ G +DVF+V
Sbjct: 851 PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVR 910
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ D ++ I ++L
Sbjct: 911 DLLGMKIVDPVRLNRIREAL 930
Score = 37.4 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL +V + L+ + A + T+ R + YV+D G I D +
Sbjct: 864 TVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRDL-LGMKIVDPVR 922
Query: 177 IDRIEARL 184
++RI L
Sbjct: 923 LNRIREAL 930
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN T+++V+ R G+L + + LT LNL I A IS+ G +DVF+V
Sbjct: 842 PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVK 901
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ ++ I + L
Sbjct: 902 DIFGLKVAHEAKLTQIRKEL 921
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCN- 166
R + +T + + D GL S + +A +V+A++ T NG + ++
Sbjct: 733 RYDPGRSVTEVTIYTADHAGLFSRLAGAMALAGGDIVDARITTMTNGMALDVFSLQGAGP 792
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
SG+ + ++ R+++ + L GD K+ +A + +F R+P
Sbjct: 793 SGARFDSGEKRSRLKSSVEKALAGD-----IKLAPELAKRASPLPSRTRVF------RVP 841
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V V N A Y+V+ V +DR LL+D+ LT + + A I+T G
Sbjct: 842 --------PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNA 893
Query: 287 A 287
A
Sbjct: 894 A 894
>gi|302770887|ref|XP_002968862.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
gi|300163367|gb|EFJ29978.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
Length = 406
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS----SDGRFFM 76
+TPRV ID+ + P TL+++ R G+L + ++VL D N + +S GR +
Sbjct: 224 DTPRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEI 283
Query: 77 DVFHVTDLNGNKLTD--------ESVISYIEQSL--ETIHYGRSNSFNGLTALELTGTDR 126
D+F +T +G KL D E V+ + L + G + T +EL+G R
Sbjct: 284 DLF-ITQADGRKLVDPEKQKALCERVVRDVANPLWVTVLPRGPDSELFVATPIELSGKGR 342
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIY-VKDCNSGSPIEDSQQI-DRIEAR 183
+L +V L L + +A + H G + IY V +SG + SQ++ + I R
Sbjct: 343 PRVLYDVTLALKMLDVCIFQADIGRHTIGDMQWEIYRVLLIDSG---DLSQRMHELIGER 399
Query: 184 LRNVLKG 190
+RNVL G
Sbjct: 400 VRNVLMG 406
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R ++ +T + + D GL S++ +A ++V+AK+ T NG +V+D +
Sbjct: 720 RVDAQRAVTEMVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQD-SE 778
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+P + +++R+ + VL G RL Q + + + +P
Sbjct: 779 GAPFDSPAKLNRLANTIEQVLSG------------------RLRLAQELASRKG--NLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++V+ + +DR LL+D+ +T + + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGER 878
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+++++ R G+L + +T L L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ E + I +L
Sbjct: 887 DVFGHKVEHERKLERIRVTL 906
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL ++ + + L + A + T+ R+ + YVKD G +E ++
Sbjct: 840 TVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDV-FGHKVEHERK 898
Query: 177 IDRIEARLRNVLKGDN 192
++RI L LK N
Sbjct: 899 LERIRVTLLAALKEQN 914
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +VI+N + T+++V R G+L E L+DL+L I A++++ G +DVF+VT
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ E I L+TI
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQTI 916
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
LT +E++G DR GLL E+ + L+DL + A V T + + YV D + + +
Sbjct: 846 LTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTDLTGKQVVSEVR 905
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
Q I RL+ +L DND A ++ +
Sbjct: 906 Q-RTIRDRLQTILL-DNDASVAPERIAQS 932
>gi|302784674|ref|XP_002974109.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
gi|300158441|gb|EFJ25064.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
Length = 406
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS----SDGRFFM 76
+TPRV ID+ + P TL+++ R G+L + ++VL D N + +S GR +
Sbjct: 224 DTPRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEI 283
Query: 77 DVFHVTDLNGNKLTD--------ESVISYIEQSL--ETIHYGRSNSFNGLTALELTGTDR 126
D+F +T +G KL D E V+ + L + G + T +EL+G R
Sbjct: 284 DLF-ITQADGRKLVDPEKQKALCERVVRDVANPLWVTVLPRGPDSELFVATPIELSGKGR 342
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIY-VKDCNSGSPIEDSQQI-DRIEAR 183
+L +V L L + +A + H G + IY V +SG + SQ++ + I R
Sbjct: 343 PRVLYDVTLALKMLDVCIFQADIGRHAIGDMQWEIYRVLLIDSG---DFSQRMHELIGER 399
Query: 184 LRNVLKG 190
+RNVL G
Sbjct: 400 VRNVLMG 406
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+NA+ T+++V R G+L E L+DL+L I A++++ G +DVF+VT
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ +E+ + + L +I
Sbjct: 895 DLLGKQVINETRQATLRSRLRSI 917
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
LT LE++G DR GLL E+ + L+DL + A V T + + YV D I +++
Sbjct: 847 LTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGKQVINETR 906
Query: 176 QIDRIEARLRNVL 188
Q + +RLR++L
Sbjct: 907 QAT-LRSRLRSIL 918
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ G+T + + D GL S++ ++ ++V+AK+ T +A ++ N G+
Sbjct: 720 TDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGT 779
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
+ D ++DR+ + N L G + +A + +F ++P
Sbjct: 780 AVTDEDKLDRLARIIENALSG-----KIWLEKELAAKPSGLPSRTRVF------KVP--- 825
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V V N A ++Y+V+ V +DR L+DV LT + A + T GER
Sbjct: 826 -----PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGER 877
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T T+++V+ R G L + LT L I A +++ G +DVF+V
Sbjct: 826 PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVK 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E + + ++L
Sbjct: 886 DVFGMKIEHEGKLKQVRETL 905
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 76 MDVFHVTDLNGNKLTDESVISYIEQSLETIHYGR-------SNSFNGL------------ 116
+DVF V D +G +TDE + + + +E G+ + +GL
Sbjct: 768 LDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRTRVFKVPPR 827
Query: 117 -----------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDC 165
T +E+ G DR G L +V A L + A+V T R+ + YVKD
Sbjct: 828 VVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKDV 887
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKGD 191
G IE ++ ++ L + L G+
Sbjct: 888 -FGMKIEHEGKLKQVRETLMDTLNGE 912
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN + TL++V+ R G+L + +T L L I A+IS+ G +DVF+V
Sbjct: 825 PRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVK 884
Query: 83 DLNGNKLTDESVISYI 98
D+ G K+ E + I
Sbjct: 885 DIFGLKVQHERKLEQI 900
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +SF +T + + +D GL S++ +A ++V+AK+ T NG ++++ +
Sbjct: 718 RIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESD- 776
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + VL G RL + + A + ++P
Sbjct: 777 GAAFDTPSKLAKLSTVIEQVLSG------------------RMRLDKELAARKG--KLPA 816
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V + N A S++++ V +DR LL+D+ +T + + A I+T GER
Sbjct: 817 RAHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGER 876
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL ++ A + L + A + T+ R+ + YVKD G ++ ++
Sbjct: 838 TLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVKDI-FGLKVQHERK 896
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
+++I + L+ D +A
Sbjct: 897 LEQIRDGVLKALRDPADSEAA 917
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + IDNA+ T++++ R G+L E L+ LNL I A++++ G +DVF+VT
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + I +++ + G
Sbjct: 980 DLTGTKITQPDRQATIRRAVMGVFEG 1005
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE++G DR GLL E+ L+ L ++ A V T R+ + YV D +G+ I Q
Sbjct: 933 TVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDL-TGTKI---TQ 988
Query: 177 IDRIEARLRNVLKG 190
DR +A +R + G
Sbjct: 989 PDR-QATIRRAVMG 1001
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRS-NSFNGLTALELTGTDRVGLL 130
GRFF D + V + + + +I+ E +L G + ++ +G T + D GLL
Sbjct: 675 GRFF-DSYFVAEDPVTLIANAQLIAAAEDALSI---GTNFDAGSGTTQVRTYSEDHPGLL 730
Query: 131 SEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+ ++ ++++A++ T +G + I ++ + G P D+ Q+DR++ + +VL
Sbjct: 731 MRLAGAISLCGANIIDARIHTTRDGMALNNIGIQ-GHGGQPFGDAHQLDRLKRSIADVLA 789
Query: 190 GDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSV 249
G +R L Q R + V P V VQ A ++V
Sbjct: 790 GKVRLRE--------------ELAQRPLPQRRADAFAV------QPRVLVQPNASNRFTV 829
Query: 250 VNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ V DR LL+ ++ TL D + + A I T GERA
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERA 867
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ T+++V++A R G+L ++ L D + I A+I++ G +D F++T
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KL + +E L
Sbjct: 875 DLTGQKLDGSQRLKGLETRL 894
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+ N+ N T +E+ DR GLL + L D + ++ A + T+ R Y+ D +G
Sbjct: 820 QPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDL-TG 878
Query: 169 SPIEDSQQIDRIEARLRNVLK 189
++ SQ++ +E RL N +K
Sbjct: 879 QKLDGSQRLKGLETRLLNAVK 899
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 863 PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVK 922
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD+ + + +L
Sbjct: 923 DLFGLKITDKERLDRVRTTL 942
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G +++ H T L ES + ++ET + G+T + + D GL S
Sbjct: 722 GSYWLSFDHDTHARHALLIGESERQHSPLTVET----QPLPARGVTEVTIYAADHPGLFS 777
Query: 132 EVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
++ +A S+V+A++ T NG ++++D G+ E+ QQ+ R+ + L G
Sbjct: 778 KIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAG-GAAFEEPQQLGRLSLLIEQALTG 836
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ ++ + RRL RM + P V + N A + +VV
Sbjct: 837 -------HLNINREIAQCGRRL--------SGRRMRAIHVP---PRVVIDNRASNTCTVV 878
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ +DR LL DV L++ + + A I T G RA
Sbjct: 879 EINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRA 915
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 47 GILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH 106
G E Q L L+LLI++A LN N+ + + + IH
Sbjct: 814 GAAFEEPQQLGRLSLLIEQALTGH-------------LNINREIAQCGRRLSGRRMRAIH 860
Query: 107 YGR-----SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ + N T +E+ G DR GLL +V A L++ + + A + T+ R + Y
Sbjct: 861 VPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFY 920
Query: 162 VKDCNSGSPIEDSQQIDRIEARL 184
VKD G I D +++DR+ L
Sbjct: 921 VKDL-FGLKITDKERLDRVRTTL 942
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I N + ++V+V R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 83 DLNGNKLTDESVISYIEQS-LETIHYGRSNSFNGLT 117
DL G K+ + I ++ L+T+ G G T
Sbjct: 892 DLTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G I
Sbjct: 842 NRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGQKIVS 900
Query: 174 SQQIDRIEARLRNVLK 189
+++ I L L+
Sbjct: 901 PDRLETIRKTLLQTLE 916
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVVIDN T T+V+++ R G+L + L++ L I A+I++ G +DVF+V
Sbjct: 809 PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVK 868
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TD + I +L
Sbjct: 869 DLFGLKITDRERLDRIRTTL 888
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIE 172
G+T + + D GL S++ +A S+V+A++ T NG ++++D G+ E
Sbjct: 706 RGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAG-GAAFE 764
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ QQ+ R+ + L G DI + + RRL RM +
Sbjct: 765 EPQQLGRLSLLIEQALTGHIDI-------NREIAQCGRRL--------SGRRMRAIHVP- 808
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A + +VV + +DR LL D+ L++ + + A I T G RA
Sbjct: 809 --PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRA 861
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 47 GILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIH 106
G E Q L L+LLI++A +D+ G +L+ + + IH
Sbjct: 760 GAAFEEPQQLGRLSLLIEQALTGH-----IDINREIAQCGRRLSG--------RRMRAIH 806
Query: 107 YGR-----SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY 161
+ + N T +E+ G DR GLL ++ A L++ + + A + T+ R + Y
Sbjct: 807 VPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFY 866
Query: 162 VKDCNSGSPIEDSQQIDRIEARL 184
VKD G I D +++DRI L
Sbjct: 867 VKDL-FGLKITDRERLDRIRTTL 888
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR + NA+ ++++++ R G+L E VL+DL+L I A+I++ G +D F+VT
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 83 DLNGNKLTDESVISYIEQSL-ETIHYG 108
DL G+K+ + + I + L ETI G
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENG 897
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ DR GLLSEV +VL+DL + A + T ++ YV D +GS +++
Sbjct: 821 NRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGSKVDN 879
Query: 174 SQQIDRIEARL 184
+++ I L
Sbjct: 880 PDRLEVIRREL 890
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V+N +SV+ ++C DR LL +V L+D+ + A I T GE+
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEK 862
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNS 167
R ++ G+T + + D GL S + +A S+V+A+++T +G +V+D
Sbjct: 756 RIDTHRGVTEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATD 815
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G P + ++ R+ A + + G+ R A + + R+ ++
Sbjct: 816 G-PFDQPTKLARLSAAIHKAMSGELKTRQALREKAAGALPSRTRVFKVP----------- 863
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A +++V+ + +DR LL D+ L + V A I+T GE A
Sbjct: 864 -------PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETA 916
Query: 288 ---YLVINCYQFDSNYCCIYSAFK 308
+ V + + + +A +
Sbjct: 917 IDVFYVKDVFGLKVEHASKLAAIR 940
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+++++ R G+L + + L L+L + A IS+ G +DVF+V
Sbjct: 864 PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVK 923
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D+ G K+ S ++ I + L T
Sbjct: 924 DVFGLKVEHASKLAAIREKLLT 945
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +EL G DR GLLS++ L L V AK+ T+ + YVKD G +E + +
Sbjct: 877 TVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDV-FGLKVEHASK 935
Query: 177 IDRIEARLRNVL 188
+ I +L L
Sbjct: 936 LAAIREKLLTAL 947
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++ N + T+V+V+ R G+L E VL DL+L I A I++ G +D F+VT
Sbjct: 826 PSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ I L+ +
Sbjct: 886 DLLGTKITNENRQGNISARLKAV 908
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
G SN F T +E+ DR GLL+E+ AVLADL + A++ T ++ YV D
Sbjct: 833 GLSNKF---TVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDL-L 888
Query: 168 GSPIEDSQQIDRIEARLRNVL-KGDNDIRSA 197
G+ I + + I ARL+ V+ + ++++RS
Sbjct: 889 GTKITNENRQGNISARLKAVMAEQEDELRSG 919
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + + ++ +A+++T +GR I + N
Sbjct: 720 RTHSFHAITEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILI---NR 776
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
P+++ + + I + +VL G K + T + + MF +
Sbjct: 777 EFPVDEDELRRAATIGRMIEDVLSGK------KRLPEVIATRAKAKRRNKMFD------I 824
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P P V + N ++VV V+C DR LL ++ L D+ + A I T GE
Sbjct: 825 P--------PSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGE 876
Query: 286 R 286
+
Sbjct: 877 K 877
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I NA+ ++++V+ R G+L E + L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + I+ I L
Sbjct: 894 DLTGQKIDSPARIATIRNRL 913
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G I+
Sbjct: 844 NRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGQKIDS 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+I I RL L+G R + +
Sbjct: 903 PARIATIRNRLIATLEGAAPERGGRAKAA 931
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTF 882
Query: 284 GER 286
GE+
Sbjct: 883 GEK 885
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V+V R G+L E L+ LNL I A++++ G +DVF+VT
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + S I ++L + G
Sbjct: 945 DLMGAKITGAARQSTIRRALIGVFEG 970
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A++ S D
Sbjct: 787 GITVLTVLAPDHPKLLSVIAGACAAAGANIVDAQI-------------------STTTDG 827
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKM--TVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+D I R D + R+ ++ + A+T E RL ++M +++P R +
Sbjct: 828 LALDTIAVRRAFDRDEDEERRAGRIRDAIEKALT-GEVRLPEVM-----AKKLPKARRTF 881
Query: 233 DY-PVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VTV N W++R ++VV V DR LLF++ TL+ + + A + T GERA
Sbjct: 882 SVEPEVTVNNTWSNR-HTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERA 937
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNS 112
DL G+K+++ + I + L + G + S
Sbjct: 894 DLVGHKISNATRQGNIRRKLLGVLSGENGS 923
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I +L VL G+N ++
Sbjct: 903 ATRQGNIRRKLLGVLSGENGSKT 925
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNS 112
DL G+K+++ + I + L + G + S
Sbjct: 894 DLVGHKISNATRQGNIRRKLLGVLSGENGS 923
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I +L VL G+N ++
Sbjct: 903 ATRQGNIRRKLLGVLSGENGSKT 925
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+++V++ R +L + L + ++++ A+I++ G D F+VT
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+TDES + I Q+L
Sbjct: 885 DLTGAKITDESRMDTIRQAL 904
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I NA+ ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + I+ I L
Sbjct: 894 DLTGQKIDNPARIATIRNRL 913
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G I++
Sbjct: 844 NRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDL-TGQKIDN 902
Query: 174 SQQIDRIEARLRNVLKG 190
+I I RL L+G
Sbjct: 903 PARIATIRNRLIATLEG 919
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GER 286
GE+
Sbjct: 883 GEK 885
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I A I++ G +D F+VT
Sbjct: 849 PSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSF 113
DL G K+++E+ + I L+ + G +
Sbjct: 909 DLVGQKISNENKRANITARLKPVMAGEEDEM 939
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS N T +E+ DR GLLSE+ +VL+DL + A++ T ++ YV D G
Sbjct: 854 SNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
I + + I ARL+ V+ G+ D +M M + R L+
Sbjct: 913 QKISNENKRANITARLKPVMAGEEDEMRERMPSGMIAPASTRSLN 957
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 799 REFTDDADELRRAGTIGRMIEDVLAG------RKRLPEVIATRTKNRRKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P VT+ N ++V+ V+C DRT LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++NA T+V+V R G+L L+ LNL I A++++ G +DVF+VT
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + S I ++L + G
Sbjct: 930 DLMGAKITGAARQSTIRRALVAVFEG 955
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
T+ GR G+T L + D LLS + A ++V+A +
Sbjct: 766 TLEAGR-----GITTLTVVAPDHPKLLSIIAGACAAAGANIVDAHI-------------- 806
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSA---KMTVSMAVTHTERRLHQMMFADR 220
S D +D I R R + ++++R A + V A+T E RL ++M
Sbjct: 807 -----STTTDGLALDTIALR-RAFDRDEDELRRAGRIQEAVEQALT-GEVRLPEVM---- 855
Query: 221 DYERMPVLRHS-TDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
++P R + T P VTV N W++R ++VV V DR LLF + TL+ + + A
Sbjct: 856 -ARKIPKGRRTFTVEPEVTVNNAWSNR-HTVVEVSGLDRPGLLFALTNTLSRLNLNIASA 913
Query: 279 TINTAGERA 287
+ T GERA
Sbjct: 914 HVATFGERA 922
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VV+DN++ T+++V R G+L E ++ LNL I A+I + G +D F+V
Sbjct: 836 APEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYV 895
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ + I++ L + G
Sbjct: 896 TDLTGAKIASPQRQAAIKRQLLDVFGG 922
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E++G DR GLL E+ ++ L ++ A + T R YV D +G+ I
Sbjct: 847 NVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDL-TGAKIAS 905
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
Q+ I+ +L +V G R AK + A
Sbjct: 906 PQRQAAIKRQLLDVFGGPG-ARGAKTPAAAA 935
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P +VIDN+ AT+++V R G+L + +++LNL I A+I + G +D F+V
Sbjct: 792 APDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYV 851
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G K+ S + I++ L
Sbjct: 852 TDLTGGKILSASRQATIKRQL 872
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 111 NSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
NSF N T +E++G DRVGLL ++ +++L ++ A + T R YV D G
Sbjct: 799 NSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGGK 858
Query: 170 PIEDSQQ 176
+ S+Q
Sbjct: 859 ILSASRQ 865
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTMV--RTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV D
Sbjct: 831 ISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D++Q I RL+ V+ D
Sbjct: 888 LFGQKVTNDNRQAS-IAQRLKAVMSEQED 915
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I+N + T+++V R G+L E VL+DL+L I A++++ G +DVF+VT
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G ++ E I L+++
Sbjct: 894 DLVGKQILSEVRQRAIRDRLQSV 916
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 110 SNSFNG-LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N +G LT +E++G DR GLL E+ +VL+DL + A V T + + YV D
Sbjct: 839 NNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK 898
Query: 169 SPIEDSQQIDRIEARLRNVL 188
+ + +Q I RL++V+
Sbjct: 899 QILSEVRQ-RAIRDRLQSVM 917
>gi|225449577|ref|XP_002283917.1| PREDICTED: uncharacterized protein LOC100256399 [Vitis vinifera]
gi|296086260|emb|CBI31701.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN-KLTDESVIS 96
+ ++ + G+ + +++ + L I + S+DGR+ VF + K+ ES+ +
Sbjct: 23 ITINCPDKAGLGCDLCRIILEFGLCIARGDFSTDGRWCYIVFSFVPCPSSLKIDWESLKN 82
Query: 97 YIEQSLETI--------HYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
+ + + YG S S + L+L DR GLL +V VL++L+ ++ K
Sbjct: 83 RLLSACPSPLFSYCFNQQYGSSPS--PVYMLKLFCLDRNGLLHDVTKVLSELEFTIERVK 140
Query: 149 VWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDI----------RSA 197
V T +GR+ L ++ D + ++ D ARL VL N I RS
Sbjct: 141 VMTTPDGRVLDLFFITD--GMELLHTKKRQDDTCARLLAVLGEFNVICEIQLAGPEYRSQ 198
Query: 198 KMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDR 257
+ S++ E + ++ M L + T +TV N+ +++++ +QC D+
Sbjct: 199 QGCSSLSPEIAEELFGSELLDNK--SNMTKLENGT----ITVDNFLSPAHTLLQIQCLDQ 252
Query: 258 TKLLFDVVCTLTDMEYVVFHATINTA 283
L +D++ T D + + N +
Sbjct: 253 KGLFYDIMRTSKDCNIQIAYGRFNPS 278
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 18 IRMNTP----RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
R N P +V IDN T+V+V + R G+L +VL ++N +++A I+++G
Sbjct: 781 FRRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGN 840
Query: 74 FFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+D F++TD+ K+TD ++ IE+ +
Sbjct: 841 RVIDSFYITDMEYRKITDAKLLKEIEEKI 869
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+V+V R G+L E L+ LNL I A++++ G +DVF+VT
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA 118
DL G ++T + + I+++L + G +N A
Sbjct: 903 DLLGAQITSPTRQAAIKRALIALFAGPNNESKAAKA 938
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+TG DR GLL E+ A L+ L ++ A V T R+ + YV D G+ I +
Sbjct: 856 TMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDL-LGAQITSPTR 914
Query: 177 IDRIEARLRNVLKG-DNDIRSAK 198
I+ L + G +N+ ++AK
Sbjct: 915 QAAIKRALIALFAGPNNESKAAK 937
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+G+T L + D LLS + A ++V A++ T D + I
Sbjct: 742 HGVTELTVYAPDHPRLLSAIAGACAVTGANIVGAQIHT----------TTDGMALDTISI 791
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT-HTERRLHQMMFADRDYERMPVLRHST 232
S++ +R E D + R+A++ S+ RL +++ A R + + +
Sbjct: 792 SREFERQE---------DEERRAARVAESIETALRGSLRLPEVV-AKRGVPKGRIRAFAL 841
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+ P VT+ N Y++V V DR LL+++ TL+ + + A + T GER
Sbjct: 842 E-PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGER 894
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ N T T+++V+ A R G+L + L L L I A +S+ G +DVF+V
Sbjct: 866 PRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVK 925
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ IEQ+L
Sbjct: 926 DVYGLKIEREASQKKIEQTL 945
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQ 175
T L + D GL S + +A CS++ A++ T H+G I ++D + + I D Q
Sbjct: 767 TILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGTILDQFRIQDKDRQAVI-DPQ 825
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
+RI + L GD + S +T ++ + +P P
Sbjct: 826 IQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQKAMS-----------VP--------P 866
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
V V N +++V+ V DR LL+ + L + + AT++T GE+
Sbjct: 867 RVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEK 917
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+N N T +E+ G DR GLL ++ L L + A V T+ ++ + YVKD G
Sbjct: 872 NNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKDV-YGL 930
Query: 170 PIEDSQQIDRIEARLRNVL 188
IE +IE L V
Sbjct: 931 KIEREASQKKIEQTLMGVF 949
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 850 PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S S I L+ +
Sbjct: 910 DLVGQKISGDSKRSNITARLKAV 932
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 855 SNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 913
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKM--------TVSMAVTHTERR 211
I + I ARL+ V+ + D +M T S A T TE++
Sbjct: 914 QKISGDSKRSNITARLKAVMAEEQDELRERMPSGIIAPPTTSRATTQTEKK 964
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 744 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 799
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 800 REFKDDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTKNRKKSKAFV------ 847
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 848 IP--------PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 899
Query: 285 ER 286
E+
Sbjct: 900 EK 901
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 850 PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S S I L+ +
Sbjct: 910 DLVGQKISGDSKRSNITARLKAV 932
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 855 SNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 913
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND-IRS-------AKMTVSMAVTHTERR 211
I + I ARL+ V+ + D +R A+ T A T TE++
Sbjct: 914 QKISGDSKRSNITARLKAVMAEEQDELRERMPSGIIAQPTPVRAATQTEKK 964
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 744 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 799
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T+ R F
Sbjct: 800 REFKDDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTKNRKKSKAFV------ 847
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 848 IP--------PSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 899
Query: 285 ER 286
E+
Sbjct: 900 EK 901
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 845 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 903
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 904 ATRQGNIKRKLLALLGAENGART 926
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 768 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 826
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 827 ATRQGNIKRKLLALLGAENGART 849
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + IDNA+ T++++ R G+L + L+ LNL I A++++ G +DVF+VT
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G K+T + I +++ + G
Sbjct: 882 DLTGTKITQPDRQATIRRAVMGVFEG 907
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE++G DR GLL ++ L+ L ++ A V T R + YV D +G+ I +
Sbjct: 835 TVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDL-TGTKITQPDR 893
Query: 177 IDRIEARLRNVLKGD 191
I + V +GD
Sbjct: 894 QATIRRAVMGVFEGD 908
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGANVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV
Sbjct: 830 TISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D D++Q I RL+ V+ D
Sbjct: 887 DLFGQKVTNDNRQAS-IAQRLKAVMSEQED 915
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G I +
Sbjct: 585 NKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VGHKISN 643
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 644 ATRQGNIKRKLLALLGAENGART 666
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 828 PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 887
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 888 DVFGHKIEHGRKLEQIKAAL 907
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 721 RVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 780
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ A + VL G A++ +A + +F ++P
Sbjct: 781 GA-FDSPAKLAKLSACVEQVLSG-----RARLDRELAARKGKLPSRAHVF------KVP- 827
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 828 -------PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGER 879
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL ++ + ++ + A + T+ R+ + YVKD G IE ++
Sbjct: 841 TVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDV-FGHKIEHGRK 899
Query: 177 IDRIEARLRNVLKGDNDIRSAKMT 200
+++I+A L L+ D R+A T
Sbjct: 900 LEQIKAALLAALE-DPAARTAAGT 922
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTMV--RTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRKKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV
Sbjct: 830 TISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D D++Q I RL+ V+ D
Sbjct: 887 DLFGQKVTNDNRQAS-IAQRLKAVMSEQED 915
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTMV--RTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRKKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV
Sbjct: 830 TISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D D++Q I RL+ V+ D
Sbjct: 887 DLFGQKVTNDNRQAS-IAQRLKAVMSEQED 915
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I Q L+ +
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAV 909
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTM--VRTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGANVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P VT+ N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV
Sbjct: 830 TISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D D++Q I RL+ V+ D
Sbjct: 887 DLFGQKVTNDNRQAS-IAQRLKAVMSEQED 915
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N T+V+V R G+L E L+ LNL I A++++ G +DVF++T
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + I+ I+++L
Sbjct: 899 DLMGARITSPTRIATIKRAL 918
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNS 167
G+T L + D LLS + A ++V+A+++T +A S + +D +
Sbjct: 738 RGVTVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTDGLALDTISVSREFERDDDE 797
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G ++ R+ L L+G E RL +MM A R+ +
Sbjct: 798 G------RRAGRVVDALERALRG------------------EMRLPEMMAAKRNAKGR-- 831
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P V+V N Y+VV V DR LL+++ TL+ + + A + T GERA
Sbjct: 832 TRPFRVEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERA 891
>gi|167854603|ref|ZP_02477384.1| uridylyltransferase [Haemophilus parasuis 29755]
gi|167854358|gb|EDS25591.1| uridylyltransferase [Haemophilus parasuis 29755]
Length = 864
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHV 81
P V+I N AT + V + + Q+L+ + I A I +SD +D F +
Sbjct: 672 PMVLISNQYARGATEIFVHCQDQAQLFARIAQMLSQKKVSIHDAQILTSDHGLVLDSFII 731
Query: 82 TDLNGNKLTDE------------------SVISYIEQSLETIHYGR-------SNSFNGL 116
T++NG L DE V + ++S++ + R +NS
Sbjct: 732 TEMNGEPLDDERSEQIQSALVKTLLADTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 791
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
TA EL DR GLL+++ + L+ +++ AK+ T R+ V + +G+ E+ Q
Sbjct: 792 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 850
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I NA+ T+++++ R G+L E VL+DL+L I A+I++ G +D F+V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ + I L+ +
Sbjct: 894 DLVGMKITNENRQTNIVARLKAV 916
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TI SN F T +EL DR GLLSE+ +VL+DL + A + T ++ YV+
Sbjct: 837 TISNALSNKF---TVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERR 211
D G I + + I ARL+ VL ++D +M M H R
Sbjct: 894 DL-VGMKITNENRQTNIVARLKAVLAKEDDELRDQMPPGMIAPHGSTR 940
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R+++F+ +T + L D LLS V A ++ +A+V+T +GR I + N
Sbjct: 728 RTHAFHAITEITLLSPDHPRLLSIVTGACAAAGANIADAQVFTTSDGRALDTILI---NR 784
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
P +D ++ R ++ R + D+ + K + + R +
Sbjct: 785 ELP-DDEDELRRAKSIGRMI----EDVLAGKAHIPEVIARKNRGKRKT------------ 827
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+ T P VT+ N ++V+ ++C DR LL ++ L+D+ + A I T GE+
Sbjct: 828 -KPFTVRPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEK 885
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 887 DVFGHKVEHGRKLEQIKAAL 906
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 720 RVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 779
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + + VL G RL + + A + ++P
Sbjct: 780 GA-FDSPAKLAKLSSCVEQVLSGRT------------------RLDRELAARKG--KLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGER 878
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL ++ + + ++ + A + T+ R+ + YVKD G +E ++
Sbjct: 840 TVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDV-FGHKVEHGRK 898
Query: 177 IDRIEARLRNVLK 189
+++I+A L L+
Sbjct: 899 LEQIKAALLAALE 911
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I NA+ T+++V+ R G+L E VL+DL+L I A I++ G +D F+VT
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDES 93
DL G K+T+E+
Sbjct: 887 DLVGQKVTNEN 897
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SN+ N T +E+ DR+GLL+E+ AVL+DL + A++ T ++ YV D
Sbjct: 832 SNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDLVGQ 891
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
+++Q++ I RL+ V+ D
Sbjct: 892 KVTNENRQVN-IANRLKPVMTEQPD 915
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE+
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEK 878
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN++ T+++V R G+L + ++L+ NL I A+I + G +DVF+VT
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 83 DLNGNKLT 90
DL+G K+T
Sbjct: 913 DLHGAKIT 920
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++DN + T+V+V+ R G+L + +T++ L I A+IS+ G +DVF+V
Sbjct: 827 PRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 886
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + I+ +L
Sbjct: 887 DVFGHKIEHGRKLDQIKAAL 906
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R +S +T + + D GL S++ +A ++V+AK+ T NG ++D +
Sbjct: 720 RVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDG 779
Query: 168 GSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
G+ + ++ ++ + VL G RL + + A + ++P
Sbjct: 780 GA-FDSPAKLAKLATCVEQVLSGRT------------------RLDRELAARKG--KLPS 818
Query: 228 LRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P V V N RS++VV V +DR LL+D+ +T++ + A I+T GER
Sbjct: 819 RAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGER 878
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ G DR GLL ++ + ++ + A + T+ R+ + YVKD G IE ++
Sbjct: 840 TVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKDV-FGHKIEHGRK 898
Query: 177 IDRIEARLRNVLKGDNDIRSAKMT 200
+D+I+A L L+ D ++A T
Sbjct: 899 LDQIKAALLAALE-DPAAKAAAKT 921
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++++ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
DL G K+ + ++ I + L G + NG
Sbjct: 894 DLTGQKIDSPTRMATIHKRLIETLEGTAPERNG 926
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
I+ ++ I RL L+G R+ K +
Sbjct: 898 QKIDSPTRMATIHKRLIETLEGTAPERNGKAKAA 931
>gi|219872237|ref|YP_002476612.1| PII uridylyl-transferase [Haemophilus parasuis SH0165]
gi|219692441|gb|ACL33664.1| uridylyltransferase [Haemophilus parasuis SH0165]
Length = 858
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHV 81
P V+I N AT + V + + Q L+ + I A I +SD +D F +
Sbjct: 666 PMVLISNQYARGATEIFVHCQDQAQLFARIAQTLSQKKVSIHDAQILTSDHGLVLDSFII 725
Query: 82 TDLNGNKLTDE------------------SVISYIEQSLETIHYGR-------SNSFNGL 116
T++NG L DE V + ++S++ + R +NS
Sbjct: 726 TEMNGEPLDDERSEQIQSALVKTLLANTEKVFNPSKKSVKHQAFKRKTKIRFLANSQPNQ 785
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
TA EL DR GLL+++ + L+ +++ AK+ T R+ V + +G+ E+ Q
Sbjct: 786 TAFELFTLDREGLLAQIGYIFGQLKLNLINAKITTIGERVEDFFVVSNQQNGALAEEEQ 844
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + I+ I L
Sbjct: 894 DLTGQKIDNPARIATIRNRL 913
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAK 198
I++ +I I RL L+G R K
Sbjct: 898 QKIDNPARIATIRNRLMATLEGIVPERGGK 927
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + A ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ R +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPRRGSKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GER 286
GE+
Sbjct: 883 GEK 885
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN++ T++++ R G+L + L LNL I A+I + G +DVF+VT
Sbjct: 820 PEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVT 879
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+T + I ++L
Sbjct: 880 DLTGTKITHAGRQATITRTL 899
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMT---VSMAVTHTERR 211
I + I AR++ V+ + D +M ++ A T E++
Sbjct: 913 QKISGDSKRANITARMKAVMAEEQDELRERMPSGIIAPAATAAEKK 958
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKD--C 165
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFP 802
Query: 166 NSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
N + + I R+ + +VL G K + T + R F +
Sbjct: 803 NDEDELRRAGTIGRM---IEDVLSG------RKRLPDVIATRAKNRKKSKAFI------I 847
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P P V + N ++V+ V+C DR LL ++ L+D+ + A I T GE
Sbjct: 848 P--------PSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGE 899
Query: 286 R 286
+
Sbjct: 900 K 900
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDNA+ T+V++ R G+L E + L+L I A++++ G +DVF+VT
Sbjct: 828 PDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVT 887
Query: 83 DLNGNKLT 90
DL G ++T
Sbjct: 888 DLTGTRVT 895
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I + L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N+F N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G
Sbjct: 839 NNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRS 196
I ++ + I +L VL +N ++
Sbjct: 898 HKISNATRQGNIRRKLLGVLGAENGSKT 925
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N T+++V+ R G+L E +++DL+L I A+I++ G +D F+VT
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I + L
Sbjct: 929 DLVGHKISNATRQGNIRRKL 948
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+N+F N T +E+ G DR GLLSE+ +++DL + A + T ++ YV D G
Sbjct: 874 NNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDL-VG 932
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRS 196
I ++ + I +L VL +N ++
Sbjct: 933 HKISNATRQGNIRRKLLGVLGAENGSKT 960
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T ++++V + R +L Q L D + I KAYI+++ +DVF+V
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KL +S+ I Q+L
Sbjct: 828 DSRGEKLLGDSLREDIVQAL 847
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
L DR GLL+++ VLA +V A+++T +G I ++ V+ +
Sbjct: 672 LMSHDRPGLLAKLCGVLALHNLAVAMAQIFTWEDGVIVDVVTVRPQDGAG---------- 721
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFA-DRDYERMPVLRHSTDYPVVT 238
D D S + + +A++H H++ Y R L + D P V
Sbjct: 722 ---------FSDKDWDSFRADIDLALSHRLDLGHKLYQKWQTTYGRKAELVGAID-PRVV 771
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDS 298
V N + +YSV+ V DR LL+ + TL D ++ A I T E+ L+ Y DS
Sbjct: 772 VDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQ--LIDVFYVLDS 829
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + ++V+A+ +T A+ ++ G P S ++ R+ A
Sbjct: 737 ADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-SDRLPRLRAM 795
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST-DYPV-VTVQN 241
++ LKG+ R A ADRD P R S +P +T N
Sbjct: 796 IQRTLKGEIVAREA-------------------LADRD---KPKKRESAFRFPTHITFDN 833
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
A Y+V+ V +DR LL+D+ TL D + A I T G
Sbjct: 834 EASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFG 876
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 829 ITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM 888
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 889 FGLKLHQQNRREALEKKL 906
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD GL S + LA S+V+A++ T NGR +V+D G+ + ++ R+
Sbjct: 748 TDHPGLFSRIAGALAVAGASIVDARIHTMTNGRALDTFWVQDAQGGA-FDSPHKLARLSV 806
Query: 183 RLRNVLKG----DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVT 238
+ L G D +IR + S RL + R V
Sbjct: 807 LIEQALSGRLNLDQEIRKVRREPS--------RLRAVQVPGR----------------VV 842
Query: 239 VQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ N A +++V+ + +DR LL D+ +++ + A I T G RA
Sbjct: 843 IDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRA 891
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN T T+++++ R G+L + +++ L I A+I++ G +DVF+V D
Sbjct: 840 RVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKD 899
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G K+ +E ++ + ++L
Sbjct: 900 VFGLKIENERKLASLREAL 918
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++ N T +EL G DR GLL ++ A +++ + A + T+ R + YVKD G
Sbjct: 845 NHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDV-FGL 903
Query: 170 PIEDSQQIDRI-EARLRNVLKGDNDI 194
IE+ +++ + EA L + + D+
Sbjct: 904 KIENERKLASLREALLAALGPANGDV 929
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PR I N + ++++V+ R G+L E L+DL+L I A+I++ G +D F+VT
Sbjct: 834 PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + I+ I L
Sbjct: 894 DLTGQKIDSPARIATIRNRL 913
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + +E+ G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
I+ +I I RL L+G R K +
Sbjct: 898 QKIDSPARIATIRNRLMATLEGIAPERGGKAKAA 931
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
+++ F +T + + D LLS + ++V+A+++T +GR I +
Sbjct: 728 KTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTADGRALDTILI----- 782
Query: 168 GSPIEDSQQIDRIE---ARLRNVLKGDNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYE 223
S++ DR E R V + D+ S K + M T+ + +F
Sbjct: 783 ------SREFDRDEDERRRAERVGRLIEDVLSGKSWLPEMIEKRTKPKRGAKVF------ 830
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++P P ++N +SV+ V+ DR LL ++ TL+D+ + A I T
Sbjct: 831 KIP--------PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTF 882
Query: 284 GER 286
GE+
Sbjct: 883 GEK 885
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 780 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 839
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I L+ +
Sbjct: 840 DLVGQKISGDSKRANITARLKAV 862
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 785 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 843
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I ARL+ V+ + D
Sbjct: 844 QKISGDSKRANITARLKAVMAEEED 868
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 674 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 729
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+DS ++ R I + +VL G K + T T R F
Sbjct: 730 REFPDDSDELRRAATIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 777
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 778 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 829
Query: 285 ER 286
E+
Sbjct: 830 EK 831
>gi|197122569|ref|YP_002134520.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
gi|196172418|gb|ACG73391.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
Length = 930
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
GLT L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GLTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLVRVLAGEEPL-DALMT---------RRLRASSVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERA 287
G RA
Sbjct: 893 GHRA 896
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++ IDN T TL++V + R GIL + + + +N+ I+ A IS+ G+ DVFH+
Sbjct: 755 QISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHIES 814
Query: 84 LNGNKLTDE----SVISYIEQSLETIHYG 108
G K+ D+ ++S +E +L ++ G
Sbjct: 815 PEGGKIKDKEHANELVSALEYALSCVYKG 843
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +VIDN T+++V + R G+L + + DL L I A+I++ G +DVF+VT
Sbjct: 832 PDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYVT 891
Query: 83 DLNGNKLTDESVISYIE-QSLETI 105
K+TDE+ S I Q LE +
Sbjct: 892 GPGKQKVTDEATKSRIRGQILELL 915
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P VV+DN++ T+++V R G+L + ++ LNL I A+I + G +D F+V
Sbjct: 837 APEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYV 896
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G K+ + I++ L
Sbjct: 897 TDLTGAKIIAPQRQATIKRQL 917
>gi|220917353|ref|YP_002492657.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955207|gb|ACL65591.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter dehalogenans
2CP-1]
Length = 930
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
GLT L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GLTELALTARDRPGLLAIVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + +A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLVRVLAGEEPL-AALMT---------RRLRASSVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERA 287
G RA
Sbjct: 893 GHRA 896
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I L+ +
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAV 909
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTMV--RTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S + + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGRQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV D
Sbjct: 831 ISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D++Q I RL+ V+ D
Sbjct: 888 LFGQKVTNDNRQAS-IATRLKAVMSEQED 915
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I+N + T ++++V S R G+L + + L+DL+L I A+I++ G +D F+V
Sbjct: 832 TPTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYV 891
Query: 82 TDLNGNKLTD 91
DL G+KLT+
Sbjct: 892 RDLIGHKLTN 901
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T + L D LLS + A ++V+A+++T +GR +I +K +++
Sbjct: 734 VTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDIILIKRAFDFDE-DET 792
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++ R++ + LKG IR A R++ +
Sbjct: 793 KRARRVKEIIEQALKGT--IRLPDEIARHAPPKRTRKIFDVT------------------ 832
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N ++SV+ V+ DR LL D+ TL+D+ + A I T GE+A
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKA 885
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N+ T+++V R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 844 VIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDL 903
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALE 120
G K+ + I + L GR + +G ++
Sbjct: 904 TGQKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQ 939
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS+ +G T +E+TG DR GLL ++ +A L ++ A + T R+ + YV D +G
Sbjct: 847 NNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDL-TG 905
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA 204
I + + D I RLR+ ++G + S + + A
Sbjct: 906 QKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQTA 941
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+I N + T+++V+ R G+L + V+ DL+L I A I++ G +D F+VT
Sbjct: 827 PSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+++ + I L+ +
Sbjct: 887 DLFGQKVTNDNRQASIATRLKAV 909
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
E++L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 713 EKALSTMV--RTHSFHAITEITVLAPDHPRLLSIITGACAAAGANIADAQIFTTSDGRAL 770
Query: 158 SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS-MAVTHTERRLHQMM 216
I + N PI++ + R NV K ++ S K + M T T+ R +
Sbjct: 771 DTILI---NREFPIDEDET-----RRGNNVGKLIEEVLSGKQRLPEMIATRTKSRRKKSA 822
Query: 217 FADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVF 276
F T P V + N ++V+ V+C DR LL D+ + D+ +
Sbjct: 823 F--------------TIPPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIH 868
Query: 277 HATINTAGER 286
A I T GE+
Sbjct: 869 SARITTFGEK 878
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G SN F T +E+ DR GLL+++ AV+ADL + A++ T ++ YV D
Sbjct: 831 ISNGLSNKF---TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTD 887
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D++Q I RL+ V+ D
Sbjct: 888 LFGQKVTNDNRQAS-IATRLKAVMSEQED 915
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V++DN T+T+V+ R G+L + ++D L I A+I G +D F+V
Sbjct: 830 TPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYV 889
Query: 82 TDLNGNKLTD 91
D +G KLTD
Sbjct: 890 VDADGRKLTD 899
>gi|86158117|ref|YP_464902.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774628|gb|ABC81465.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 930
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN----------GRIASLIYVKD 164
G+T L LT DR GLL+ V VLA + + A+V++ + GR + ++
Sbjct: 734 GVTELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRG 793
Query: 165 CNSGSPIEDSQQIDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
+ G P+E ++ R R L VL G+ + A MT RRL A +
Sbjct: 794 PDDG-PVEPARW--RAARRDLARVLAGEEPL-DALMT---------RRLRASTVAAKPLP 840
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
R+P + + N + R++SVV+V DR LL V T ++ V A I T
Sbjct: 841 RVPT--------KIVIDNHSARAHSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATE 892
Query: 284 GERA 287
G RA
Sbjct: 893 GHRA 896
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V+V R G+L E L+L I A++++ G +DVF+VT
Sbjct: 828 PDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVT 887
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG-----RSNSFNGLTA 118
DL G ++T + I +++ + G R+ L A
Sbjct: 888 DLTGTRVTQPDRQAAIRKAMLDVFAGDVAMLRAEGLEALVA 928
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRRKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + L+ + +VV+A+ +T +G + +V+D + G+P E+++ + R+
Sbjct: 750 ADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSD-GTPFEETR-LPRLRK 807
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ L GD R A FADRD +R R ST +T
Sbjct: 808 MIERTLHGDIVPREA-------------------FADRDKIKKRERAFRVSTS---ITFD 845
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
N Y+++ V +DR LL D+ TL + + A I T GE+
Sbjct: 846 NEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQ 891
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V ++
Sbjct: 842 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNM 901
Query: 85 NGNKLTDESVISYIEQSL 102
G K ++ +E+ L
Sbjct: 902 FGLKYHEQEKCDALERKL 919
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 799 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ++N+ T+V+V R G+L Q L+ LNL I A+I++ G +DVF+VT
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + S I ++L
Sbjct: 900 DLMGAKIIGAARHSAIRRAL 919
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARHRKKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 799 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 825 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 885 DLVGQKISGDSKRANITARMKAV 907
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 719 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 774
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + NVL G K + T T R F
Sbjct: 775 REFADDADELRRAGTIGRMIENVLAG------RKRLPEVIATRTRNRKKSKAFD------ 822
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 823 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 874
Query: 285 ER 286
E+
Sbjct: 875 EK 876
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 830 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 888
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 889 QKISGDSKRANITARMKAVMAEEQD 913
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++++ R G+L E VL DL+L I A I++ G +D F+V
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ I L+ +
Sbjct: 886 DLVGQKITNENRQGSISVRLKAV 908
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 106 HYGRSNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
H SNS N T +E+ DR+GLL+EV AVLADL + A++ T ++ YV D
Sbjct: 827 HVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVID 886
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDND 193
G I + + I RL+ V+ D
Sbjct: 887 L-VGQKITNENRQGSISVRLKAVMSEQPD 914
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 99 EQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIA 157
+Q+L T+ R++SF+ +T + + D LLS + A ++ +A+++T +GR
Sbjct: 712 DQALATM--VRTHSFHAITEITVLAPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRAL 769
Query: 158 SLIYVKDCNSGSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
I + N PI++ + + + I + +VL G K + T T+ R
Sbjct: 770 DTILI---NREFPIDEDEMRRANTISKMIEDVLAGK------KRLPEVIATRTKGRKRNK 820
Query: 216 MFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVV 275
F T P VT+ N ++V+ ++C DR LL +V L D+ +
Sbjct: 821 TF--------------TVKPHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDI 866
Query: 276 FHATINTAGER 286
A I T GE+
Sbjct: 867 HSARITTFGEK 877
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+IDN T T+V+V+ G+L + L + + I A IS+ G F+DVF++
Sbjct: 853 PRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYLK 912
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ +S + I ++L
Sbjct: 913 DVFGLKVDSKSKLEDIRRAL 932
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARHRKKNKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN+ T+++V+ R G+L + +T L I A+I++ G +DVF+V
Sbjct: 844 PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVK 903
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGR 109
D+ G K+ +E ++ + +L GR
Sbjct: 904 DVFGLKVQNERKLAQLRSALIEALAGR 930
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V A + + A + T+ R + YVKD G +++
Sbjct: 854 NRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDV-FGLKVQN 912
Query: 174 SQQIDRIEARLRNVLKG 190
+++ ++ + L L G
Sbjct: 913 ERKLAQLRSALIEALAG 929
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN+ T+++V+ R G+L + +T L I A+I++ G +DVF+V
Sbjct: 844 PRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVK 903
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGR 109
D+ G K+ +E ++ + +L GR
Sbjct: 904 DVFGLKVQNERKLAQLRSALIEALAGR 930
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G DR GLL +V A + + A + T+ R + YVKD G +++
Sbjct: 854 NRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDV-FGLKVQN 912
Query: 174 SQQIDRIEARLRNVLKG 190
+++ ++ + L L G
Sbjct: 913 ERKLAQLRSALIEALAG 929
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 825 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 885 DLVGQKISGDSKRANITARMKAV 907
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 830 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 888
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 889 QKISGDSKRANITARMKAVMAEEED 913
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 719 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 774
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 775 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 822
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 823 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 874
Query: 285 ER 286
E+
Sbjct: 875 EK 876
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K++ +S + I ++ +
Sbjct: 909 DLVGQKISGDSKRANITARMKAV 931
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 913 QKISGDSKRANITARMKAVMAEEED 937
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 849 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 908
Query: 83 DLNGNKLTDES 93
DL G K++ +S
Sbjct: 909 DLVGQKISGDS 919
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 854 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 912
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR+R V+ + D
Sbjct: 913 QKISGDSKRANITARMRAVMAEEED 937
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 743 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 798
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T R F
Sbjct: 799 REFTDDADELRRAATIGRMIEDVLSG------RKRLPEVIATRARNRKKSKAFV------ 846
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 847 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 898
Query: 285 ER 286
E+
Sbjct: 899 EK 900
>gi|15010738|gb|AAK74028.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
gi|23308377|gb|AAN18158.1| At2g39570/F12L6.23 [Arabidopsis thaliana]
Length = 411
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 122/249 (48%), Gaps = 17/249 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ K+ +S
Sbjct: 20 PTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDS 79
Query: 94 V----ISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ +S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM--MFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
+ +R + + AD + + + S++ V+TV N +++++ ++C D+ L
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRCVDQKGLF 255
Query: 262 FDVVCTLTD 270
+D++ T D
Sbjct: 256 YDILRTSKD 264
>gi|18405098|ref|NP_565908.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|3355486|gb|AAC27848.1| expressed protein [Arabidopsis thaliana]
gi|330254601|gb|AEC09695.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949474|gb|AEP31950.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 411
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 122/249 (48%), Gaps = 17/249 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ K+ +S
Sbjct: 20 PTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPKIDWDS 79
Query: 94 V----ISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ +S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM--MFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLL 261
+ +R + + AD + + + S++ V+TV N +++++ ++C D+ L
Sbjct: 196 LESVQRFSSLPPLAADELFGPDGFDISGSSSNKAVLTVDNQLSPAHTLLQIRCVDQKGLF 255
Query: 262 FDVVCTLTD 270
+D++ T D
Sbjct: 256 YDILRTSKD 264
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
VVIDN AT+V V + R G+L + + DL+L + A I++ +DVF+VTDL
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 85 NGNKLTDE 92
+GNK+ DE
Sbjct: 854 DGNKILDE 861
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N++ T+V++ R G+L + + ++ LNL I A+I++ G +DVF+VTDL
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 85 NGNKLTDESVISYIEQSLE 103
G K+ + I + LE
Sbjct: 906 TGQKIANIGRQEIIRERLE 924
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGARITAPTRQAAIKRAL 914
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D + I S
Sbjct: 736 GVTELTILAADHPWLLSIIAGACASAGANIVDAQIYT----------TTDGQALDTIAIS 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMT-VSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
++ +R E D R+A++ + V RL +M + +R LR
Sbjct: 786 REYERDE---------DEGRRAARIAEIIEQVLEGRLRLPDVMPSRAAGKR---LRPFVV 833
Query: 234 YPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR ++++ V DR LLF + ++ + + A + T GERA
Sbjct: 834 EPKVTINNQWSDR-HTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERA 887
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGARITAPTRQTAIKRAL 914
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V+++N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGARITAPTRQAAIKRAL 916
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 38/182 (20%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D + I S
Sbjct: 737 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYT----------TTDGQALDTIAIS 786
Query: 175 QQIDRIE------ARLRNVLKG--DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
++ DR E AR+ +++ D +R + A T
Sbjct: 787 REYDRDEDEGRRAARIGEIIEQVIDGRLRLPDVVARRAAGKTR----------------- 829
Query: 227 VLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
LR P V V N W+DR ++V+ V DR LLF + ++ + + A + T GE
Sbjct: 830 -LRPFVVEPKVIVNNQWSDR-HTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGE 887
Query: 286 RA 287
RA
Sbjct: 888 RA 889
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V++ N + T+++V+ R G+L + VL DL+L I A I++ G +D F+VT
Sbjct: 827 PSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+ +E+ I L+ +
Sbjct: 887 DLVGQKVVNENRQGNIAARLKAV 909
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
G SN F T +E+ DR GLL+++ AVLADL + A++ T ++ YV D
Sbjct: 834 GLSNKF---TVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVG 890
Query: 168 GSPIEDSQQIDRIEARLRNVL-KGDNDIRSAKMTVSMA 204
+ +++Q + I ARL+ V+ + ++++RS T +A
Sbjct: 891 QKVVNENRQGN-IAARLKAVMSEQEDELRSGMPTGIIA 927
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + A ++ +A+++T +GR I + N
Sbjct: 721 RTDSFHAITEITVLAPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRALDTILI---NR 777
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
P+++ + + I + +VL G K + T + R F
Sbjct: 778 EFPVDEDELRRAGTISRMIEDVLSG------KKRLPEVIATRAKSRKRNKTF-------- 823
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
T P V + N ++V+ V+C DRT LL D+ L D+ + A I T GE
Sbjct: 824 ------TIPPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGE 877
Query: 286 R 286
+
Sbjct: 878 K 878
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVIDN ++++V +A G L Q + D L I KAYI+++ +DVF+V D
Sbjct: 564 KVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLD 623
Query: 84 LNGNKLTDESVISYIEQSL 102
G KL DE + Q L
Sbjct: 624 SRGRKLVDEDFRHEVTQGL 642
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G+L E VL+DL+L I+ A I++ G +D F+VT
Sbjct: 109 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 168
Query: 83 DLNGNKLTDES 93
DL G K++ +S
Sbjct: 169 DLVGQKISGDS 179
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+NS N T +E+ DR GLLSE+ AVL+DL + A++ T ++ YV D G
Sbjct: 114 TNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDL-VG 172
Query: 169 SPIEDSQQIDRIEARLRNVLKGDND 193
I + I AR++ V+ + D
Sbjct: 173 QKISGDSKRANITARMKAVMAEEED 197
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LL+ + A ++V+A+++T +GR I+V S
Sbjct: 3 RTDSFHAITEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHV----S 58
Query: 168 GSPIEDSQQIDR---IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+D+ ++ R I + +VL G K + T T R F
Sbjct: 59 REFADDADELRRAGTIGRMIEDVLSG------RKRLPEVIATRTRNRKKSKAFV------ 106
Query: 225 MPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+P P V + N ++V+ V+C DR LL ++ L+D+ + A I T G
Sbjct: 107 IP--------PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFG 158
Query: 285 ERAYLVINCY 294
E+ VI+ +
Sbjct: 159 EK---VIDTF 165
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + V LA + +VV+A+ +T +G + +++D G P E S+ + R+
Sbjct: 732 DHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDAE-GHPFEASR-LKRLSQM 789
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+R LKG+ R A ++ D+ +R R T +T N
Sbjct: 790 IRKTLKGEVIARDA-----------------LVSRDKIKKREKAFRVPTH---ITFDNEG 829
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ +L + +A I T GE+
Sbjct: 830 SEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQ 872
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 823 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDM 882
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K S +E+ L E I G
Sbjct: 883 FGLKYHSLSKQKTLEKRLREAISEG 907
>gi|356533259|ref|XP_003535183.1| PREDICTED: uncharacterized protein LOC100789465 [Glycine max]
Length = 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 24/266 (9%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
TL+ V+ + G+ + +++ L I + +S+DG++ VF V G + T S+
Sbjct: 20 PTLLTVNCPDKTGLGCDLCRIMLFFGLNIIRGDVSTDGKWCYIVFWVV---GKQRTRWSL 76
Query: 95 IS--YIE-----QSLETIHYGRSN----SFNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+ IE S I Y RS+ + + L + DR GLL +V VL +L+ +
Sbjct: 77 LKKRLIEACPSCSSASGISYYRSDLQPSKPSDVFLLNFSCHDRKGLLHDVTEVLCELELT 136
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + KV T +G++ L ++ D + ++ D L ++ GD I V
Sbjct: 137 IKKVKVSTTPDGKVMDLFFITDTRE--LLHTKKRKDETIEHLTEIM-GDAIISIDIELVG 193
Query: 203 MAVTHTERR---LHQMMFADRDYERMPVLRHST---DYPVVTVQNWADRSYSVVNVQCKD 256
+T + L + D E + R T DY +T+ N ++++V + C+D
Sbjct: 194 PEITACSKAPPFLPTAITDIFDLELPDLARGGTLRSDYVSITMDNLLSPAHTLVQIMCQD 253
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINT 282
LL+D++ TL D + + T
Sbjct: 254 HKGLLYDIMRTLKDYNIQISYGRFTT 279
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVMQPDRLAMIRAAV 900
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|225441177|ref|XP_002268949.1| PREDICTED: uncharacterized protein LOC100265834 [Vitis vinifera]
gi|297739971|emb|CBI30153.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ N CP T + D R ++ L I + +S+DG++ VF +
Sbjct: 20 PRVLTVN--CPDKTGLGCDLCR----------IILFFGLSIVRVDVSTDGKWCYIVFWII 67
Query: 83 DLNGNKLTDESVIS-YIEQSLETIHYGRSNSFNGLTA--------LELTGTDRVGLLSEV 133
G T S++ + ++ + S+ L L+ DR GLL +V
Sbjct: 68 ---GKSTTRWSLLQDRLSEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDV 124
Query: 134 FAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD- 191
VL +L+ ++ + KV T +GR+ L ++ D + + ++ + L+ VL GD
Sbjct: 125 TEVLCELELTIKKVKVSTTPDGRVMDLFFITD--TRELLHTKKRQEDTHNHLKTVL-GDA 181
Query: 192 ----------NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
++I + T ++ + R + F D +P + + VT+ N
Sbjct: 182 MISCDISMVGSEITACSQTSTLLPSAITREIFGSKFEDEPPSGLPQVSGNIS---VTMDN 238
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
++++V + C+D LL+D++ TL D + + + T R
Sbjct: 239 SLSPAHTLVQIVCQDHKGLLYDMMRTLKDYNIKISYGRLTTKPRR 283
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 547 PDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVT 606
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 607 DLTGTRVMQPDRLAMIRAAV 626
>gi|85710052|ref|ZP_01041117.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
gi|85688762|gb|EAQ28766.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
Length = 924
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V DN+ T+++V + R +L L NL+++ A+I++ G D F+V
Sbjct: 829 APQVNFDNSASNHFTVIEVTARDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYV 888
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+K+T ++ IE SL
Sbjct: 889 TDLTGSKVTAPERLAEIEASL 909
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 33/204 (16%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I + + + + +A +H V + LNL I+ A I+S +F +
Sbjct: 687 GTPLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKL-TDESVISYIEQSL--------------------ETIHYG------- 108
D + V D +G+ + + I+ I + L + H+
Sbjct: 747 DTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D +
Sbjct: 807 STDALRQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDN 192
P+ D R++A L L DN
Sbjct: 866 QPLADPDLCKRLQAALVEQLSQDN 889
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MKDMEWPACLD-EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDL 59
+K+ P+ LD EY+ + P+++++N TL++V + R G+L + + L +L
Sbjct: 774 LKEKAKPSILDSEYKP----SHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFEL 829
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
L I+ A I++ DVF+V DL G K+ DE + I ++L
Sbjct: 830 GLDIRIAKIATKADQVADVFYVRDLEGQKVEDEKETARIVETL 872
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R++ F T +E+ +RVGLL ++ L +L + AK+ T ++A + YV+D G
Sbjct: 800 RASDF--FTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDL-EG 856
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ED ++ RI L L G
Sbjct: 857 QKVEDEKETARIVETLNKKLGG 878
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRVV+DN T T+++V+ R G++ + + L I A+I++ G +DVF+V
Sbjct: 855 PRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVK 914
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ +E ++ + Q+L
Sbjct: 915 DVFGLKVENERKLAKLRQAL 934
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 22/175 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
+T + + D GL+ ++ LA S+V+A++ T NG +V+D SG +
Sbjct: 753 AVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQD-TSGEAFDQ 811
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERR-LHQMMFADRDYERMPVLRHST 232
++ +I + L G DI S + T R +H +P
Sbjct: 812 PNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIH-----------VP------ 854
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V V N A +++V+ V +DR L+ D+ + + A I T G RA
Sbjct: 855 --PRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRA 907
Score = 42.0 bits (97), Expect = 0.38, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+ G DR GL+ ++ A +A + A + T+ R + YVKD G +E+ ++
Sbjct: 868 TVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDV-FGLKVENERK 926
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
+ ++ L L +D + M TH
Sbjct: 927 LAKLRQALLGALTSPDDTGPMPLPPPMRRTH 957
>gi|399064503|ref|ZP_10747442.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
gi|398030747|gb|EJL24152.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
Length = 917
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V+S R +L L + L++ A+I++ G D F+VT
Sbjct: 824 PRVLFDNKASNRFTVVEVNSRDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT + +E+ L
Sbjct: 884 DLLGEKLTATPRLKALERRL 903
>gi|297823847|ref|XP_002879806.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297325645|gb|EFH56065.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-DLNGNKLTDES 93
T+V V+ G+ +++ + L I +A S+DGR+ VF VT D++ ++ +S
Sbjct: 20 PTIVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWCYIVFWVTPDISSPRIDWDS 79
Query: 94 ----VISYIEQSLETIHYGRSNSFN---GLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++S L + ++ ++ + L L+ DR GLL +V VL +L+ ++
Sbjct: 80 LKNRLLSACPSCLGSFYFCLQSNVSKPPSLYLLKFFCRDRKGLLHDVTKVLTELEFTIQR 139
Query: 147 AKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ + ++ D + + Q+ + L VL G++ + S ++ ++
Sbjct: 140 VKVMTTPDGRVLDMFFITD--AMDLLHTKQRQTKTCDHLTAVL-GEHGV-SCELELAGPE 195
Query: 206 THTERRLHQM-------MFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRT 258
+ +R + +F ++ S++ V+TV N +++V+ ++C D+
Sbjct: 196 LESVQRFSSLPPVAADELFGPDGFDNS---GSSSNKAVLTVDNQLSPAHTVLQIRCVDQK 252
Query: 259 KLLFDVVCTLTD 270
L +D++ T D
Sbjct: 253 GLFYDILRTSKD 264
>gi|147817636|emb|CAN64495.1| hypothetical protein VITISV_004035 [Vitis vinifera]
Length = 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ N CP T + D R ++ L I + +S+DG++ VF +
Sbjct: 62 PRVLTVN--CPDKTGLGCDLCR----------IILFFGLSIVRVDVSTDGKWCYIVFWII 109
Query: 83 DLNGNKLTDESVIS-YIEQSLETIHYGRSNSFNGLTA--------LELTGTDRVGLLSEV 133
G T S++ + ++ + S+ L L+ DR GLL +V
Sbjct: 110 ---GKSTTRWSLLQDRLSEACPSCSSASGFSYFQLQPPKPPDVFLLKFCCYDRKGLLHDV 166
Query: 134 FAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD- 191
VL +L+ ++ + KV T +GR+ L ++ D + + ++ + L+ VL GD
Sbjct: 167 TEVLCELELTIKKVKVSTTPDGRVMDLFFITD--TRELLHTKKRQEDTHNHLKTVL-GDA 223
Query: 192 ----------NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
++I + T ++ + R + F D +P + + VT+ N
Sbjct: 224 MISCDISMVGSEITACSQTSTLLPSAITREIFGSKFEDEPPSGLPQVSGNIS---VTMDN 280
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
++++V + C+D LL+D++ TL D + + + T R
Sbjct: 281 SLSPAHTLVQIVCQDHKGLLYDMMRTLKDYNIKISYGRLTTKPRR 325
>gi|334142818|ref|YP_004536026.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
gi|333940850|emb|CCA94208.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
Length = 918
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A++++ G D F+VT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT S + +E+ L
Sbjct: 885 DLLGEKLTATSRLKALERRL 904
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 22/175 (12%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G T + + +D GL + + ++++A++ T GR V+D G P
Sbjct: 724 HGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLVQDP-LGRPFM 782
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ Q++R+ + N L N I+ + V + R F R
Sbjct: 783 EESQLERLRTSIENALA--NRIK----ILPQLVAKPDARPRADAFEVR------------ 824
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V N A ++VV V +DR LL + L + + +V+ A + T GERA
Sbjct: 825 --PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERA 877
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + +A +H V V+ LNL I+ A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYGRSNSFN-------GLTALELTGTD 125
I+ I L + H+ S N + +ELT D
Sbjct: 764 ARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYTDTMRSASLIELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
R GLL+ V + D SV+ AK+ T R+ + YV D + G P+ D
Sbjct: 824 RPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDAD-GRPLADP 871
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+P+V I +A+L+++ + R G+L ++ D +L + A I++ G DVF+V
Sbjct: 801 SPQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD +G L D + S ++ +L
Sbjct: 861 TDADGRPLADPGLCSALQHAL 881
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D GSP E ++++ R+
Sbjct: 740 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAE-GSPYE-AERLQRLRD 797
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+R LKGD V E A R +++ + P +T N
Sbjct: 798 MIRKTLKGD-------------VVAGE--------AIRSRDKLKKRERAFKVPTHITFDN 836
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + + A I T GE+
Sbjct: 837 EGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQ 881
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 832 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDM 891
Query: 85 NGNKLTDESVISYIEQSLET 104
G K E+ +E+ L T
Sbjct: 892 FGLKFHSEAKQKALEKKLRT 911
>gi|402820021|ref|ZP_10869588.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
gi|402510764|gb|EJW21026.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
Length = 973
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+IDN V +T+++V R G+L + L +LN+ I A + G +DVF+V DL
Sbjct: 861 VMIDNDVSSHSTVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAVTFGERAVDVFYVQDL 920
Query: 85 NGNKLTDESVISYIEQSLETI 105
G K+T +S ++ I SL+ +
Sbjct: 921 TGEKVTRKSKLTAIMDSLQMV 941
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVI N + T V + + R G+L ++ LL++ A I++ G DVF +TD
Sbjct: 798 RVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITD 857
Query: 84 LNGNKLTDESVISYIEQSL 102
LNG ++D ++ ++Q+L
Sbjct: 858 LNGEPVSDPALCQQLQQTL 876
>gi|359399328|ref|ZP_09192332.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
gi|357599368|gb|EHJ61082.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
Length = 918
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A++++ G D F+VT
Sbjct: 825 PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVT 884
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KLT S + +E+ L
Sbjct: 885 DLLGEKLTATSRLKALERRL 904
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 22/175 (12%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G T + + +D GL + + ++++A++ T GR V+D G P
Sbjct: 724 HGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLVQDP-LGRPFM 782
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+ Q++R+ + N L N I+ + V + R F R
Sbjct: 783 EESQLERLRTSIENALA--NRIK----ILPQLVAKPDARPRADAFEVR------------ 824
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V N A ++VV V +DR LL + L + + +V+ A + T GERA
Sbjct: 825 --PRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERA 877
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 34/287 (11%)
Query: 25 VVIDNAVCP-TATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
V+I P T+V V+ + G+ + +++ + L I +A +DG++ V V
Sbjct: 9 VLIQQGNSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQ 68
Query: 84 LNGNKLT-------DESVISYIEQSLETIHYGRSNSFNGLTA------LELTGTDRVGLL 130
L + L ++ L ++Y NG +A L+ DR GLL
Sbjct: 69 LQHSNLLRLDWDSLKNRLLRVSPPCLTPLYY--DQKLNGSSAAPSVYLLKFCCVDRKGLL 126
Query: 131 SEVFAVLADLQCSVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
+V VL +L+ ++ KV T +G++ L ++ D + ++ D L +V +
Sbjct: 127 HDVTEVLTELEFTIQRLKVMTTPDGKVVDLFFITD--GRELLHTKKRRDDTCRYLYDVFR 184
Query: 190 GDNDIRSAKMTVSMAVTHTERRLHQM-------MFADRDYER---MPVLRHSTDYP---V 236
++ ++ T+R L + +F+ E+ M LR +T P +
Sbjct: 185 --EYCIGCELQLAGPECDTQRNLSSLPLVVAEELFSCELSEKESCMQALRTATTSPKKAI 242
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
VTV N +++++ +QC D+ L +D++ D+ V + +++
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSS 289
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--MDVFHVT 82
V +DN + P TL+++ + G+ + +++ DLN+ + SS + + MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 83 DLNGNKLTDESVISYIEQSL--ETIH--------YGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D ++ + L E +H G +EL G R + +
Sbjct: 302 QTDGKKILDPKLLDNLCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYD 361
Query: 133 VFAVLADLQCSVVEAKVWTHNGR-----IASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
V L L + A++ H+ + + + V+ N P+ Q +++ A +R
Sbjct: 362 VTLALKKLGICIFSAEIGRHSTQDRQWEVYRFLLVE--NGEFPLASGQARNQMAAGIRRT 419
Query: 188 LKG 190
L G
Sbjct: 420 LMG 422
>gi|392376054|ref|YP_003207887.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Candidatus
Methylomirabilis oxyfera]
gi|258593747|emb|CBE70088.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
[Candidatus Methylomirabilis oxyfera]
Length = 932
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 94 VISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
VI+ +++ E + G + + R G ++V L +++ A+++T
Sbjct: 720 VIARVQRGEEAASQWAAFPLAGYSEFTVCACGRHGRFAQVVGTLTASGMNILSAQIFTLA 779
Query: 154 GRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
+ + D G IED DR+ A L+ VL G TV++ H
Sbjct: 780 SGMVIRHFRVDNGRGVAIEDPAVWDRVVADLQEVLTG---------TVAV---------H 821
Query: 214 QMMFADRDYERMPVLRHSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDME 272
++ + R + ++ T +P+ V N ++Y+V++++ +DR LL+ + TL+ +E
Sbjct: 822 DLIKSRRKEVLVRPIQQGTVFPIKVEFDNLVSQAYTVLDIRTRDRLGLLYLITSTLSQLE 881
Query: 273 YVVFHATINTAGER 286
+ A I T E+
Sbjct: 882 VDIRSAKITTEAEQ 895
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V DN V T++ + + R G+L L+ L + I+ A I+++ +DVF+VT+
Sbjct: 845 KVEFDNLVSQAYTVLDIRTRDRLGLLYLITSTLSQLEVDIRSAKITTEAEQVVDVFYVTN 904
Query: 84 LNGNKLTDESVISYIEQSLETI 105
+G+KL DE + I LE +
Sbjct: 905 KDGSKLIDEGRRAQIGIELERV 926
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ D SG+P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITD-KSGAPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ R+ ARL VL
Sbjct: 875 PERQQRLRARLIEVL 889
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 11 DEYEKLVIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
D+Y ++V R +TPR V+I+ TL+++ + R G+L ++ + +
Sbjct: 785 DDYPQIVTR-HTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQD 843
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTD 91
+ + A I++ G DVF +TD +G LTD
Sbjct: 844 ISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T+V + + R G+L ++ LL++ A I++ G DVF VTD
Sbjct: 807 QVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTD 866
Query: 84 LNGNKLTDESVISYIEQSL 102
LNG+ ++D + +++ +L
Sbjct: 867 LNGDPVSDPELCQHLQDTL 885
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDNA+ T+V++ R G+L E L L+L I A++++ G +DVF+VT
Sbjct: 821 PDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVT 880
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ ++ I ++
Sbjct: 881 DLTGTRVVQPDRLAMIRAAV 900
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN TL++VD+ R G+L + + L D N+ + A I++ G +D F+V D+
Sbjct: 853 ISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDM 912
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G KL E+ IE+ L E + +G
Sbjct: 913 FGLKLHGEAKQRTIEKRLREAVEHG 937
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T + D G+ + + LA + +VV+A+ +T +G + + +V+D + G P ++S
Sbjct: 753 VTRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDAD-GKPYDES 811
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE-RMPVLRHSTD 233
+ RLR ++ + S ++ S A+ ++ RD + R P
Sbjct: 812 RL-----PRLRKMI---DKTLSGEVVTSQALVSKDK------VKKRDAQFRFPT------ 851
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
++ N Y+++ V +DR LLFD+ L D V A I T G
Sbjct: 852 --SISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYG 900
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V++++ R +L L + L++ A+I++ G D F+VT
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+T I IE+ L
Sbjct: 884 DLLGEKITAAPRIKAIERRL 903
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D GL S + LA + +VV+A+ +T N A+ ++ N G+P E + ++ R+ +
Sbjct: 749 DHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQDNDGNPYE-AARLPRLRKMI 807
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
L+G+ + A + D+ +R + T+ ++ N
Sbjct: 808 ERTLRGEVVAKDA-----------------LKDKDKIKKRERAFKVPTN---ISFDNDGS 847
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DRT LL+D+ TL + + A I T GE+
Sbjct: 848 EIYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQ 889
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + ++ I A I++ G +D F+V D+
Sbjct: 840 ISFDNDGSEIYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDI 899
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNSFNG 115
G K E+ + +E+ L E I G + G
Sbjct: 900 VGLKYHSEAKRAGLERKLREAIAQGAERAVAG 931
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN+ T+++V + R G L + + L +L+L I A I++ D+FH+
Sbjct: 780 PIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIR 839
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KLTD + + + ++L
Sbjct: 840 DTEGGKLTDSARLQAVHEAL 859
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P+VT+ N A Y+V+ V DRT LFD+ TL ++ + A I T RA
Sbjct: 780 PIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRA 832
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ TDR G L ++ LA+L S+ AK+ T GR A + +++D G + DS +
Sbjct: 793 TVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRDTEGGK-LTDSAR 851
Query: 177 IDRIEARL 184
+ + L
Sbjct: 852 LQAVHEAL 859
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I N + +++ V R G+L E L+DL+L I A+I++ G +D F+V+
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + + I L
Sbjct: 894 DLTGQKIDNPARLKTIRDRL 913
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+ N + ++++G DR GLLSE+ L+DL + A + T ++ YV D +G
Sbjct: 839 RNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDL-TG 897
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAK 198
I++ ++ I RL L+G+ R K
Sbjct: 898 QKIDNPARLKTIRDRLIATLQGEAGQRGVK 927
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+VVIDN ++++V ++ G L Q + D L I KAYI+++ +DVF+V
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D G KL DE + Q +
Sbjct: 742 LDSRGQKLVDEDFRQEVTQGI 762
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
TP V+I T + + +A +H V + LNL I+ A I+S F +
Sbjct: 687 GTPLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTL 746
Query: 77 DVFHVTDLNGNKLTDESV-ISYIEQSL--------------------ETIHYG------- 108
D + V D +G + D I+ I Q L + H+
Sbjct: 747 DTYIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ ++ LE+ DR GLL+ + + D SV AK+ T R+ + YV D ++
Sbjct: 807 STDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTDAHN- 865
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSM 203
P+ D R++A L L N + + +S+
Sbjct: 866 QPLSDPDLCKRLQAALVEQLSQANGQETVPVRISI 900
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T Y V D + GS
Sbjct: 700 EFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDTYIVLDADGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q+I I L + LK +D + +RR+ + L+H
Sbjct: 760 GDNPQRIAEIRQGLVDALKNPDDYPNI----------IQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P+VT+ A R SV+ V DR LL + D + V +A I T GER
Sbjct: 798 FAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGER 853
>gi|297815750|ref|XP_002875758.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
gi|297321596|gb|EFH52017.1| hypothetical protein ARALYDRAFT_323253 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
A ++ V+ R G+ + +++ D L I K +++DG + V V + T
Sbjct: 8 AHVITVNCPDRTGLGCDICRIILDFGLYITKGDVTTDGVWCYIVLWVVP---HYDTLRLR 64
Query: 95 ISYIEQSLETIHYGRSNSF-----------NGLTALELTGTDRVGLLSEVFAVLADLQCS 143
S+++ L ++ S F + L+ DR GLL +V VL +L+ S
Sbjct: 65 WSHLKNQLVSVCPSCSTYFVLNLMSPCPASTPVYLLKFFCLDRNGLLHDVTQVLTELELS 124
Query: 144 VVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ KV T +GR+ L ++ D E Q+ R + R+VL + ++
Sbjct: 125 IQTVKVTTTPDGRVLDLFFITDNMDLLHTEKRQEETR--GKFRSVLG------ESCISCE 176
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
+ + E HQ + +D M L++ + VT N + +++ +QC D LL+
Sbjct: 177 LQLAGPEYECHQNVLSDD----MTKLKNVS----VTFDNSLSPANTLLQIQCVDHRGLLY 228
Query: 263 DVVCTLTDME 272
DV+ TL D +
Sbjct: 229 DVLRTLKDFD 238
>gi|326386427|ref|ZP_08208050.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209088|gb|EGD59882.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 916
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ DN T+++V + R +L + L + L++ A+I++ G +D F+VT
Sbjct: 824 PIVIFDNKASDRFTVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+T ES + IE+ L
Sbjct: 884 DILGEKITSESRLRSIERRL 903
>gi|357503147|ref|XP_003621862.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
gi|355496877|gb|AES78080.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
Length = 418
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 21/269 (7%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQYLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ L +D++ D + V + N++ +
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAK 285
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKL-TDE 92
AT + V S + + + A L+ LNL I+ A I SS + +D F V + NG L ++
Sbjct: 740 ATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDTFFVLNENGEPLGNNQ 799
Query: 93 SVISYIEQSL-------------------ETIHYGRSNSFNGLTA--------LELTGTD 125
+++ I+Q L + Y S + L+ LE+ D
Sbjct: 800 TLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLSTDTIRNCSVLEVISPD 859
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + D ++ AK+ T R+ + ++ D N G P+ D ++++ +R
Sbjct: 860 RPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIAD-NDGKPLGDVALCEKLQQEIR 918
Query: 186 NVL 188
L
Sbjct: 919 EQL 921
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 964 DLLGAQINAPTRQSAIKSALTHVMAG 989
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 801 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 860
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G K+ + V R F
Sbjct: 861 EDEG------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKARPFVIE---- 903
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T
Sbjct: 904 ----------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF 952
Query: 284 GERA 287
GERA
Sbjct: 953 GERA 956
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 917 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 975
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 976 QSAIKSALTHVMAGDKAVQPA 996
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N+ T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 736 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDEDEG 795
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + V A R L
Sbjct: 796 ------RRATRIGDMIEEVLEG-------KLRLPDVV------------ARRATNGKGKL 830
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ T P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 831 KPFTVEPEVAINNSWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 889
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G K+ + V R F
Sbjct: 793 EDEG------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKARPFVIE---- 835
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T
Sbjct: 836 ----------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 907
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 908 QSAIKSALTHVMAGDKAVQPA 928
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 35/277 (12%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVIS 96
++ V+ + G+ + + + L I K +S+DG + V V + + L S
Sbjct: 24 IITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWV--IPQSILLPRMSYS 81
Query: 97 YIEQSLETIHYGRSNSF---------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
Y++ L+ I SF + + L+ DR GLL +V VL +L+ ++
Sbjct: 82 YLKDRLQAICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKVLCELELTIQRV 141
Query: 148 KVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
KV T +G++ L +V D + + ++ + RL VL GD+ I+
Sbjct: 142 KVTTTPDGKVLDLFFVTD--NMELLHTRKRQNETCERLNAVL-GDSCIKCELQLAGPEYE 198
Query: 207 HTE----------RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA-----DRSYSVVN 251
H + L Q +D D + S D + N A ++++++
Sbjct: 199 HNQGISSLSPVLANELFQCELSDNDVRSQAL---SPDMKKLKKANAALDNSLSQAHTLLQ 255
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATI--NTAGER 286
+QC D LL+D++ TL DM + + + N G R
Sbjct: 256 IQCADHKGLLYDIMRTLKDMNFKISYGRFLPNVMGYR 292
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 834 PEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 894 DLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 36/181 (19%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 734 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 793
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPV 227
++ RI + VL+G ++ MA T ++ RL +
Sbjct: 794 ------RRATRIGDTIEQVLEG-----KLRLPDVMARRTASKTRLKPFIVE--------- 833
Query: 228 LRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N W+DR Y+V+ V DR LLF + ++ + + A + T GER
Sbjct: 834 -------PEVTINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 287 A 287
A
Sbjct: 886 A 886
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G K+ + V R F
Sbjct: 793 EDEG------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKARPFVIE---- 835
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T
Sbjct: 836 ----------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 907
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 908 QSAIKSALTHVMAGDKAVQPA 928
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G +R ++ V R R
Sbjct: 793 EDEG------RRATRIGEMIEDVLEGK--LRLPEVVAKRTV--------------RSKAR 830
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
V+ P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T
Sbjct: 831 PFVIE-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 907
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 908 QSAIKSALTHVMAGDKAVQPA 928
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 834 PEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 894 DLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 36/181 (19%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 734 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 793
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPV 227
++ RI + VL+G ++ MA T ++ RL +
Sbjct: 794 ------RRATRIGDTIEQVLEG-----KLRLPDVMARRTASKTRLKPFIVE--------- 833
Query: 228 LRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N W+DR Y+V+ V DR LLF + ++ + + A + T GER
Sbjct: 834 -------PEVTINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 287 A 287
A
Sbjct: 886 A 886
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + S I+ +L + G
Sbjct: 896 DLLGAQINAPTRQSAIKSALTHVMAG 921
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G +R ++ V R+ R
Sbjct: 793 EDEG------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RNKAR 830
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
V+ P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T
Sbjct: 831 PFVIE-----PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 907
Query: 177 IDRIEARLRNVLKGDNDI 194
I++ L +V+ GD +
Sbjct: 908 QSAIKSALTHVMAGDKAV 925
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 25/185 (13%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + +VV+A+ +T +G + +++D + G P E S +I R+
Sbjct: 738 DHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDAD-GHPYE-SARIPRLRQM 795
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A M D+ +R R ST ++ N
Sbjct: 796 ILKTLKGEVVPREA-----------------MKSRDKIKKRERAFRVST---AISFDNEG 835
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYCCI 303
++++ V +DR LLFD+ TL + A I T GE+ +V Y D +
Sbjct: 836 SEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQ--VVDTFYVKDMFGLKL 893
Query: 304 YSAFK 308
YS K
Sbjct: 894 YSETK 898
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R +L + + L N+ I A I++ G +D F+V D+
Sbjct: 829 ISFDNEGSEIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G KL E+ +E L E I G+ +
Sbjct: 889 FGLKLYSETKQKALEAKLREAISEGQERA 917
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L D N+ I A I+
Sbjct: 814 DKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIA 873
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K ES + +E L T
Sbjct: 874 TYGEQVVDTFYVKDMFGLKYHSESKLRGLEAKLRT 908
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
T D G+ + + LA + +VV+A+ +T +G + +V+D G P E + ++ R
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQDAE-GHPFE-AARLPR 791
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
+ + LKG+ R A + + ER + V H +T
Sbjct: 792 LTQMIHKTLKGEVVAREA-LKSRDKIKKRERAFN-------------VPTH------ITF 831
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
N Y+++ V +DR LL+D+ TL D + +A I T GE+
Sbjct: 832 DNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQ 878
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN++ T+V+V R G+L + +++L+L I A+I++ G DVF+V+
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 83 DLNGNKLTD 91
D G K+T+
Sbjct: 900 DNEGTKITE 908
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
G+T L + D LLS + A ++V+A+V+T +A V
Sbjct: 735 EPLRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSREFDFD 794
Query: 171 IEDSQQIDRIEARLRNVLKGD---NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPV 227
++ ++ RI + N L G+ D+ +A++ + A T +
Sbjct: 795 EDELRRASRIAFAVENALAGEITLTDMVAARVGSAGARQKTFKV---------------- 838
Query: 228 LRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+P VT+ N ++VV V DR LLFD+ +++++ + A I T GE+A
Sbjct: 839 ------HPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKA 892
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E++G DR GLL ++ +++L ++ A + T + A + YV D N G+ I +
Sbjct: 850 NRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSD-NEGTKITE 908
Query: 174 SQQIDRIEARLRNVL---KGDNDIRSAK 198
+ + + ++ ++ KG++ +SA+
Sbjct: 909 PVRQEAVRRKILHIFDQPKGESAPKSAR 936
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
AT + + + +H V + LNL I A I+S +F +D + V D +G + +
Sbjct: 704 ATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I Q L + H+ ++++ +T LE+ D
Sbjct: 764 ARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE-ARL 184
R GLL+ + + D S+ AK+ T R+ + +V D ++ P+ D + R++ A
Sbjct: 824 RPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHN-QPLSDPELCARLQLAIA 882
Query: 185 RNVLKGDNDIRSAKMTV 201
+ GD+ I+ +++++
Sbjct: 883 EQLADGDSYIQPSRISI 899
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 23/178 (12%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSG 168
F G T + + D+ + A + L S+ +A+V T + Y V D + G
Sbjct: 698 QREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDTYIVLDADGG 757
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
S + +I I L L+ D T +RR+ + L
Sbjct: 758 SIGNNPARIQEIRQGLVEALRNPADY----------PTIIQRRVPRQ------------L 795
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+H P VT+QN A R +++ + DR LL + D + + +A I T GER
Sbjct: 796 KHFAFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGER 853
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ D +L ++ A I++ G DVF V
Sbjct: 801 APQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIE 99
TD + L+D + + ++
Sbjct: 861 TDAHNQPLSDPELCARLQ 878
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 43/283 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT---D 91
T+V V + G+ + +V+ L + K +S+DGR+ V V G + D
Sbjct: 20 PTVVTVSCPDKTGLGCDLCRVVLLFRLSVVKGDMSTDGRWCYIVLWVLPRGGRPVPVPWD 79
Query: 92 ESVISYIEQSLETIHYGRSNSF-------------NGLTALELTGTDRVGLLSEVFAVLA 138
++ +G N++ L L+L DR+GLL +V VL
Sbjct: 80 LLKDRLLQLCPVAPPFGFDNAYLAAAGLQDLAPPPPKLFLLKLCCFDRMGLLHDVTRVLC 139
Query: 139 DLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLRNVL----- 188
+L+ ++ KV T +G + L ++ D ++ S E++Q D++EA L + L
Sbjct: 140 ELELTIRRVKVSTTPDGSVLDLFFITDARELLHTKSRREETQ--DKLEAVLGDSLTCCEI 197
Query: 189 --KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRS 246
G++ + + S+ TE+ MF + E P+ VT+ N
Sbjct: 198 DPAGEDMLSCLQSWASLTPAITEQ-----MF---NTEEQPISTRGGTI-SVTMDNSLSSV 248
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGE 285
++++ +QC D LL+D++ T+ D + Y F+A+ N E
Sbjct: 249 HTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCE 291
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYIS 69
E + + R T V +DN++ TL+++ G+L + ++ + D N+ + + Y S
Sbjct: 226 EEQPISTRGGTISVTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYAS 285
Query: 70 SDGRFFMDVFHVTDLNGNKLTDE----SVISYIEQSL------ETIHYGRSNSFNGLTAL 119
+GR +D+F V +G K+ D+ ++ + L ++ G +
Sbjct: 286 QNGRCEIDLFAVQS-DGKKILDQHRQRALCCRLRMELLRPLRVALVNRGPDTELLVANPV 344
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
E++G R + ++ L +LQ + A++ H
Sbjct: 345 EVSGKGRPLVFYDITLALKNLQKRIFLAEIGRH 377
>gi|388501956|gb|AFK39044.1| unknown [Medicago truncatula]
Length = 418
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 21/269 (7%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQCLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ L +D++ D + V + N++ +
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAK 285
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 14 EKLVIRMNTP------------RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
E L+ R +TP +V DN + T++ V + + G+L + + V DL +
Sbjct: 749 EDLIKRASTPFFKKKIPKEIKKKVEFDNEISSNYTVIDVFTEDKIGLLYKILSVFEDLGI 808
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
++KA IS+D +D F+VTD N +K+T+++ I I+ SL
Sbjct: 809 NVQKAKISTDVDRVVDSFYVTDKNYHKITEQTFIDKIKFSL 849
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +++ D++GLL ++ +V DL +V +AK+ T R+ YV D N I +
Sbjct: 783 TVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDKNY-HKITEQTF 841
Query: 177 IDRIEARLRNVL 188
ID+I+ L V+
Sbjct: 842 IDKIKFSLMEVI 853
>gi|217071952|gb|ACJ84336.1| unknown [Medicago truncatula]
Length = 418
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 21/269 (7%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTH 207
V T +GR L ++ D ++ D + L L G+ I S H
Sbjct: 140 VMPTPDGRALDLFFITD--EMELFHTKERRDDVCQCLSEAL-GERCISSELQLAGPEYGH 196
Query: 208 TE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWADRSYSVVNVQCKD 256
+ + +F +++ + S D P VTV N ++++ +QC D
Sbjct: 197 LQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLSSVHTLLQIQCVD 256
Query: 257 RTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+ L +D++ D + V + N++ +
Sbjct: 257 QKSLCYDLMRISKDSDIKVAYGRFNSSAK 285
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V DN T+++V + R +L + L + + +I+ A+I+ G D F+VT
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+TD S + I +L
Sbjct: 884 DLTGDKITDPSRLETIRAAL 903
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T N G + +++D + G P E++ RI
Sbjct: 739 ADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQDGDDG-PYEEA----RI-P 792
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
RLR +++ T+S V TE A RD +++ + P +T N
Sbjct: 793 RLRKMIE---------KTLSGEVVATE--------AIRDRDKIKKRERAFRVPTHITFDN 835
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYC 301
Y+++ V +DR LL D+ L M + A I T GE+ V++ + +
Sbjct: 836 EGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQ---VVDTFYVKDMFG 892
Query: 302 CIYSA 306
Y A
Sbjct: 893 LKYHA 897
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L +N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K S +E+ + E I G
Sbjct: 891 FGLKYHAASKQRTLEKKMREAISKG 915
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+N T+++V R G+L + ++ L+L I A++++ G DVF+VT
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 910 DLMGAQITAPTRQAAIKRAL 929
>gi|168006925|ref|XP_001756159.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692669|gb|EDQ79025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 422
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 31/270 (11%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
+ ++ + G+ + +++ + L + K +S+DGR+ VT + S++
Sbjct: 23 ITINCPDKVGLGCDLARIVFEFGLSVTKGDMSTDGRWCFVALWVTPRSRPSTVRWSLL-- 80
Query: 98 IEQSLETIHYGRSNSF-----------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+Q LE + S + L++ +DR GLL +V L +++ ++ +
Sbjct: 81 -KQRLEDVCPSALASILTPVSPPVPEAKRVLLLQVCSSDRTGLLHDVAQKLWEMELTIHK 139
Query: 147 AKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR L +V D + P + ++ + + +L+ L + + S
Sbjct: 140 IKVSTSPDGRAVDLFFVTDNRNKQPWK--KRAEEVTNQLKEFLGEPCSLCEISLAGSECG 197
Query: 206 THTERRLHQMMFADRDYERMPVLR--------------HSTDYPVVTVQNWADRSYSVVN 251
T L + D YE H + VVTV+N +S+V
Sbjct: 198 GLTCFPLPATITKDIFYEDPATFEKGNTKSEKINSRSEHHANEVVVTVENSTSPVHSLVQ 257
Query: 252 VQCKDRTKLLFDVVCTLTDMEYVVFHATIN 281
+ CK R LL+D + T+ D V H I
Sbjct: 258 LTCKSRKSLLYDCLRTVKDFSLKVAHGRIG 287
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + L+ + +VV+A+ +T +G ++ +++D + G+P E+S+ + R+
Sbjct: 736 SDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQDMD-GTPFEESR-LPRLRD 793
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+R L G+ R A H+ ++ F R+ R + +T N
Sbjct: 794 MIRKTLWGEVKPREA--------IHS-----RLRFKKRE-------RAFSVPTSITFDNE 833
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL++ + A I T GE+
Sbjct: 834 GSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQ 877
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 828 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDM 887
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G K S +E L + I G+ +
Sbjct: 888 FGLKFFTPSKQKTLEHRLRDAIEEGKERA 916
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T++++ R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G +++ + S I+ +L + G
Sbjct: 896 DLLGAQISAPTRQSAIKSALTHVMAG 921
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQISAPTR 907
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 908 QSAIKSALTHVMAGDKAVQPA 928
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G +R ++ V R R
Sbjct: 793 EDEG------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RGKAR 830
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
V+ P VT+ N W+DR Y+V+ + DR LL+++ ++ + + A + T
Sbjct: 831 PFVIE-----PEVTINNQWSDR-YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV I N T++++ + R G+L ++ D +L I+ A I++ G DVF V
Sbjct: 801 APRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N +L+D + + +++++
Sbjct: 861 TDANNQQLSDPELCTRLQETI 881
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 35/155 (22%)
Query: 45 RHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDESV-ISYIEQSL 102
+H V + LNL I A I +S +F +D + V + +G+ + D I I Q L
Sbjct: 714 QHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEGDGSSIGDNPARIKQIRQGL 773
Query: 103 ------------------------------ETIHYGRSNSFNGLTALELTGTDRVGLLSE 132
TIH +++ LT +ELT DR GLL+
Sbjct: 774 IDALINPDDYPSIIQRRVPRQLKHFDFAPRVTIH---NDAKRPLTVIELTAPDRPGLLAR 830
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
V + D S+ AK+ T R+ + +V D N+
Sbjct: 831 VGRIFLDFDLSIQNAKIATLGERVEDVFFVTDANN 865
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T L + D+ + A +A L ++ +A++ T + Y+ GS I
Sbjct: 700 EFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEGDGSSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G D A + + +RR+ + L+H
Sbjct: 760 GDN------PARIKQIRQGLID---ALINPDDYPSIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V D + + +A I T GER
Sbjct: 799 DFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGER 853
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 853 PEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 912
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 913 DLLGAQITAPTRQAAIKRAL 932
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA------SLIYVKDCNSG 168
G+T L + D LLS + A ++V+A+++T IA + Y +D + G
Sbjct: 753 GVTELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEG 812
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G + RL MM A R + +
Sbjct: 813 ------RRATRIGDTIEQVLEG------------------KLRLPDMM-ARRTASKTRLK 847
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
S + P V++ N W+DR Y+V+ V DR LLF + ++ + + A + T GERA
Sbjct: 848 PFSVE-PEVSINNQWSDR-YTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERA 905
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVI+N T+++V R G+L + ++ L+L I A++++ G DVF+VT
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 928 DLMGAQITAPTRQAAIKRAL 947
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
++ Y R +S+ T + L D GL S++ V+A +++ A+++T IA I ++
Sbjct: 698 SVVYNRESSY---TEVILVTVDIAGLFSKISGVMAANGVNILGAQIFTQKSGIAVDI-LQ 753
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYE 223
G+ +D ++ IE L L+G D+ E+R ++ R
Sbjct: 754 VGRDGNIYDDDRKWATIEKDLIWFLQGRGDVDE----------QVEKRKSSILDLSRQVP 803
Query: 224 RMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
+P P V + N Y+VV+V DR LL+ + +L + + + I+T
Sbjct: 804 TIP--------PRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTK 855
Query: 284 GERA 287
G+RA
Sbjct: 856 GDRA 859
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV IDN V T+V V + R G+L + L + + I + IS+ G D F+V
Sbjct: 807 PRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYVQ 866
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G+K+ + + ++L
Sbjct: 867 DIFGHKIVQPEKLDELRETL 886
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++NA+ T++++ R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 85 NGNKLTD 91
G K+ +
Sbjct: 902 TGQKIAN 908
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D GL S + LA + ++V+A+ +T +G ++ +V+D + G+P E+S+ + R+
Sbjct: 749 DHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGD-GNPYEESR-LQRLRQM 806
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L+G+ R A + D+ +R R T +T N
Sbjct: 807 IVRTLRGEVVAREA-----------------LKDKDKIKKRERAFRVDTK---ITFDNDG 846
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + + A I T GE+
Sbjct: 847 SEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQ 889
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 17 VIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFM 76
R++T ++ DN T+++VD+ R G+L + + L + ++ I A I++ G +
Sbjct: 833 AFRVDT-KITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVV 891
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSL-ETIHYGRSNSFN 114
D F+V D+ G K E+ +E+ L E I G + +
Sbjct: 892 DTFYVKDMVGLKYYSEAKRQSLERKLREAIAQGAQRAIS 930
>gi|357503149|ref|XP_003621863.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
gi|355496878|gb|AES78081.1| hypothetical protein MTR_7g024320 [Medicago truncatula]
Length = 433
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD--- 91
T+V V+ + G+ + +++ + L I +A IS+DGR+ VF V + D
Sbjct: 20 PTIVTVNCPDKAGLGCDLCRIILEFGLRITRADISTDGRWCFIVFWVIPHPASLKIDWEN 79
Query: 92 --ESVISYIEQSLETIHYGRSN-SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
++S L + ++ + N S + L++ D+ GLL ++ +L +LQ ++ K
Sbjct: 80 LKTRLLSPCPSCLFSYNFNQRNPSPPPIYLLKVWIIDQKGLLHDINEILCNLQLTIQRVK 139
Query: 149 VW-THNGRIASLIYVKDCNSGSP------IEDSQQIDRIEARLRNVLK------GDNDIR 195
V T +GR L ++ D S IE +++ + R +V + G+ I
Sbjct: 140 VMPTPDGRALDLFFITDEIEKSVYLVYALIETLKELFHTKERRDDVCQYLSEALGERCIS 199
Query: 196 SAKMTVSMAVTHTE------RRLHQMMFADRDYERMPVLRHSTDY-----PVVTVQNWAD 244
S H + + +F +++ + S D P VTV N
Sbjct: 200 SELQLAGPEYGHLQGFSSLPPAYSEELFGPELVDKVSLHPLSQDMTTLKTPTVTVDNSLS 259
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
++++ +QC D+ L +D++ D + V + N++ +
Sbjct: 260 SVHTLLQIQCVDQKSLCYDLMRISKDSDIKVAYGRFNSSAK 300
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+PRV+ DN T+++V++ R +L +VL + L++ A+I+ G +D F+V
Sbjct: 824 SPRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYV 883
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G KL +E L
Sbjct: 884 TDLTGGKLAGGERQDRLEARL 904
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 22/174 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + +D GL + + ++++A++ T G V+D + G+P +
Sbjct: 725 GATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTGWALDNFLVQDPH-GAPFRE 783
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
QQ++R++ + + L N I + H+ + +
Sbjct: 784 EQQLERLKKSIADALA--NRIDLTPKLAQRPLPHSRSKAFDVS----------------- 824
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V N A ++V+ V +DR LL + L + VV A I GERA
Sbjct: 825 -PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERA 877
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 33/181 (18%)
Query: 35 ATLVKVDSARRHGILLEAVQV--LTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE 92
ATLV V ++ G+ L N++ + + S G + +D F V D +G +E
Sbjct: 726 ATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTG-WALDNFLVQDPHGAPFREE 784
Query: 93 SVISYIEQSL----------------ETIHYGRSNSF-------------NGLTALELTG 123
+ +++S+ + + RS +F N T +E+
Sbjct: 785 QQLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSPRVLFDNKASNRFTVIEVNA 844
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR LL+ + VL + + V A + + R YV D +G + ++ DR+EAR
Sbjct: 845 RDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDL-TGGKLAGGERQDRLEAR 903
Query: 184 L 184
L
Sbjct: 904 L 904
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 897 DLLGAQITAPTRQAAIKRAL 916
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 22/174 (12%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G+T L + D LLS + A ++V+A+++T D
Sbjct: 737 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTT-------------------DG 777
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
+ +D I A R + D++ R A M E +L R L+ T
Sbjct: 778 RALDTI-AITREYDRDDDEGRRATRIGEMIEDILEGKLRLPEVVARRASGKGKLKPFTVE 836
Query: 235 PVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W++R Y+V+ V DR LL+ + +++ + + A + T GERA
Sbjct: 837 PEVAINNQWSER-YTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERA 889
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G ++ + + I+ +L + G
Sbjct: 501 DLLGAQINAPTRQAAIKSALTHVMAG 526
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 342 GVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 401
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + +VL+G K+ + V R F
Sbjct: 402 ------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKAKPFVVE-------- 440
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N W+DR Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 441 ------PEVTINNQWSDR-YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 493
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 454 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQINAPTR 512
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 513 QAAIKSALTHVMAGDKAVQPA 533
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G +++ + + I+ +L
Sbjct: 896 DLLGAQISAPTRQAAIKSTL 915
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D +
Sbjct: 736 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDED-- 793
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++++ RI + VL+G K+ ++A T + H+ +
Sbjct: 794 ----EARRATRIGETIEQVLEG-----KLKLPDAVARRTTRGKQHKAFSVE--------- 835
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 836 ------PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERA 888
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV I+N + T+++V+ G+L E +++DL+L I A+I++ +D F+VT
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+++ + I++ L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E+ G D GLLSE+ +++DL + A + T + ++ YV D G I +
Sbjct: 844 NKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVTDL-VGHKISN 902
Query: 174 SQQIDRIEARLRNVLKGDNDIRS 196
+ + I+ +L +L +N R+
Sbjct: 903 ATRQGNIKRKLLALLGAENGART 925
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 29/149 (19%)
Query: 55 VLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD----ESVISYIEQSL------- 102
L L+L I+ A I+S +D + V D NG+ +TD E + S +E++L
Sbjct: 726 ALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFP 785
Query: 103 ----------------ETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
E + ++ ++ T LE+ DR GLL+ + + D S+
Sbjct: 786 NLIQRRTSRQLKQFEFEPTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLET 845
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
AK+ T RI + Y+ D N G PI D +
Sbjct: 846 AKIMTEVERIDDIFYITDAN-GDPISDPE 873
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P I N TL++V + R G+L ++ D NL ++ A I ++ D+F++T
Sbjct: 803 PTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT 862
Query: 83 DLNGNKLTDESVISYIEQSL 102
D NG+ ++D ++Q++
Sbjct: 863 DANGDPISDPEFCMELQQAV 882
>gi|418938172|ref|ZP_13491734.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
gi|375055173|gb|EHS51446.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
Length = 944
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I N++ T+++V+ R G L E L DL+L I A I++ G +D F+V
Sbjct: 827 PDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVM 886
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
DL G K+T+E+ + I L+ +
Sbjct: 887 DLVGQKVTNENRQANIVNRLKAV 909
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 110 SNSF-NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS N T +E+ DR+G L+E+ A LADL + A++ T ++ YV D G
Sbjct: 832 SNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVMDL-VG 890
Query: 169 SPIEDSQQIDRIEARLRNVL-KGDNDIRSAKMTVSMAVTHTERR 211
+ + + I RL+ V+ +G + R + S A+ +R
Sbjct: 891 QKVTNENRQANIVNRLKAVMTEGGEEPRDKEAPQSSAIAAPAQR 934
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNS 167
R++SF+ +T + + D LLS + A ++ +A+++T +GR I + N
Sbjct: 721 RTHSFHAITEITVLSPDHPRLLSIIAGACAAAGANIADAQIFTTSDGRALDTILI---NR 777
Query: 168 GSPIEDSQ--QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERM 225
PI+D + + I + +VL G +K + T ++ + F
Sbjct: 778 EFPIDDDEMRRAATIGKMIEDVLSG------SKRLPEVIATRSKGKKKNKTF-------- 823
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
PV P V + N ++V+ V+C DR L ++ L D+ + A I T GE
Sbjct: 824 PV------QPDVRISNSLSNKFTVIEVECLDRIGFLAEITAALADLSLDIHSARITTFGE 877
Query: 286 R 286
+
Sbjct: 878 K 878
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ RH +L + + L + N+ I A I++ G +DVF+V D+
Sbjct: 841 ITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDM 900
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G K+T E+ I+ L E I G S
Sbjct: 901 IGLKITSENKQQIIKGKLQEAIEVGAEAS 929
>gi|332296440|ref|YP_004438363.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
gi|332179543|gb|AEE15232.1| UTP-GlnB uridylyltransferase, GlnD [Thermodesulfobium narugense DSM
14796]
Length = 849
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 29 NAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS-DGRFFMDVFHVTDLNGN 87
N + P +T++++ + RHG+L Q L+ L L I+ A IS+ +GR D F++T N
Sbjct: 773 NNISPKSTVIEIIAEDRHGLLYRLTQTLSSLGLYIQTAKISTWEGR-AEDAFYITKENNL 831
Query: 88 KLTDESVISYIEQ 100
KL+D+ Y+++
Sbjct: 832 KLSDQECQEYLKK 844
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
TD G+ + + LA + +VV+A+ +T +G + +++D + G+P D ++ R+
Sbjct: 746 TDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDAD-GNPY-DIARLPRLRQ 803
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R ++ D+ +R R T +T N
Sbjct: 804 MIGKTLKGEIKARE-----------------ELKSRDKVKKREKAFRVPTH---ITFDNE 843
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ +L + + +A I T GE+
Sbjct: 844 GSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQ 887
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 838 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDM 897
Query: 85 NGNKLTDESVISYIEQSLET 104
G K ES +E+ L T
Sbjct: 898 FGLKYYSESKQKTLEKRLRT 917
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ +DN TL++V + R GIL + V +N+ ++ A IS+ G DVFHV
Sbjct: 759 RISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGESVFDVFHVEG 818
Query: 84 LNGNKLTD----ESVISYIEQSL 102
G ++ D +IS +E SL
Sbjct: 819 PEGGRIEDHIHLRELISALEYSL 841
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VT+ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +V+D + G P ED + + R+E
Sbjct: 745 ADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQD-HDGHPFEDIK-LKRLED 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G R A M D+ +R T+ +T N
Sbjct: 803 MIHKTLSGKVIARDA-----------------MKSRDKMKKREKAFTVPTN---ITFDND 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL D + A I T GE+
Sbjct: 843 GSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQ 886
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 837 ITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ++ + +E+ L
Sbjct: 897 FGLKFFSDAKMKSLEKKL 914
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D G+ S + LA + ++V+A+ +T A+ ++ G P + ++ R+ +
Sbjct: 746 DHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADRLPRLRTMI 804
Query: 185 RNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWAD 244
+ LKG+ R A + D+ +R R T VT N A
Sbjct: 805 QRTLKGEIVAREA-----------------LAGRDKPKKREAAFRFPTH---VTFDNEAS 844
Query: 245 RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+V+ V +DR LL+D+ TL D + A I T G +
Sbjct: 845 DVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQ 886
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V DN T+++VD+ R G+L + + L D ++ I A I++ G +D F+V D+
Sbjct: 837 VTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G KL +E+ L
Sbjct: 897 FGLKLHQPQRREALEKRL 914
Score = 39.3 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR GLL ++ LAD + A + T ++ YVKD G + Q+
Sbjct: 848 TVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDM-FGLKLHQPQR 906
Query: 177 IDRIEARLRNVLK 189
+ +E RLR +K
Sbjct: 907 REALEKRLRQAIK 919
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T++++ R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
DL G +++ + + I+ +L + G
Sbjct: 896 DLLGAQISAPTRQAAIKSALTHVMAG 921
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E++G DR GLL E+ ++ L ++ A V T R + YV D G+ I +
Sbjct: 849 TVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDL-LGAQISAPTR 907
Query: 177 IDRIEARLRNVLKGDNDIRSA 197
I++ L +V+ GD ++ A
Sbjct: 908 QAAIKSALTHVMAGDKAVQPA 928
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKD 164
+ G+T L + D LLS + A ++V+A+++T +GR I Y +D
Sbjct: 733 DEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRD 792
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYER 224
+ G ++ RI + +VL+G +R ++ V R R
Sbjct: 793 EDEG------RRATRIGEMIEDVLEGK--LRLPEVVARRTV--------------RGKAR 830
Query: 225 MPVLRHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
V+ P VT+ N W+DR Y+V+ + DR LL+++ ++ + + A + T
Sbjct: 831 PFVIE-----PEVTINNQWSDR-YTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATF 884
Query: 284 GERA 287
GERA
Sbjct: 885 GERA 888
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ S + L+ + +VV+A+ +T +G + +++D + GSP E ++ + R+
Sbjct: 732 SDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQDAD-GSPYEQNR-LGRLRD 789
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+R L G+ R A ++ + ER T +T N
Sbjct: 790 MIRKTLMGEVKPREAILSKG-KIKKRERAF-------------------TVPTSITFDNE 829
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + + A I T GE+
Sbjct: 830 GSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQ 873
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 824 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDM 883
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 884 FGLKFYTPSKQKTLEKRL 901
>gi|356546627|ref|XP_003541726.1| PREDICTED: glycogen phosphorylase 1-like [Glycine max]
Length = 983
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
+DN+ +T + + + G+L +V L L + +A + +G FF+ F VTD +G
Sbjct: 63 VDNSDSADSTAFVIRARNQIGLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSHG 122
Query: 87 NKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDR 126
NK+ D + I+++L G + NG ++ + +R
Sbjct: 123 NKIEDSDSLQRIKRALAEAIAGEDDGGNGTISVTRSAANR 162
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 838 PEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 897
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 898 DLLGAQITAPTRQAAIKRAL 917
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + AV A R L
Sbjct: 797 ------RRATRIGEMIEEVLEG-------KLRLPEAV------------ARRATNGRAKL 831
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P V++ N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 832 RAFVVEPEVSINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 890
>gi|384248169|gb|EIE21654.1| hypothetical protein COCSUDRAFT_48206 [Coccomyxa subellipsoidea
C-169]
Length = 544
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 116/296 (39%), Gaps = 60/296 (20%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD 91
CP AT + D AR +L D L I +S+DGR+ +F V G
Sbjct: 54 CPDATGLGCDIAR----------LLLDFGLRIMDGDVSTDGRWCFMIFKVKLGAGVP--- 100
Query: 92 ESVISYIEQSLETI---HYG--------RSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ +++ LE I +G R + L++T DR G L ++ L +
Sbjct: 101 -AHWPLLKRRLEAICPNSHGDYSLWRNTRRQDYENPFLLQVTSYDRRGFLHDLMHTLWEA 159
Query: 141 QCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKM 199
V +A + T G++ + ++ D P ++ ++ +I +R L+ R A
Sbjct: 160 DVVVFKAHITTGPGGKVLDMFWIYDNRCELP--ENHRVLQITELVRECLQQ----RDANC 213
Query: 200 TVSMAVTHT-----------------------ERRLHQMMFADRDYERMPVLRHSTDYPV 236
T+ A T R++ + V + +Y
Sbjct: 214 TIMPAPPETCDLDSTATILQRCACKDATSASPLRKILSSKRKGSSSGSLDVSSEADEYGC 273
Query: 237 -----VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VT+ N +YSVVNV C+DR L++D++ TL D+ V +A I GE A
Sbjct: 274 PENVQVTIDNCTASNYSVVNVVCRDRKGLVYDLMRTLKDIHVRVAYAKIVVRGELA 329
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 855 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 914
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 915 DLLGAQITAPTRQAAIKRAL 934
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 753 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 812
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 813 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 854
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 855 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 907
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 797 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 838
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 839 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 835 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 895 DLLGAQITAPTRQAAIKRAL 914
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 733 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 792
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 793 ------RRATRIGETIEEVLEGK--LRLPEAVARRASSGSKAKLRAFVVE---------- 834
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 835 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 887
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 AVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G +R + A + ++ +L +
Sbjct: 797 ------RRATRIGETIEEVLEGK--LRLPEAVARRATSGSKAKLRAFVVE---------- 838
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 839 ------PEVEINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D GL S + V+A +++ A++ T NG++ ++ V IE+S+ R++
Sbjct: 723 DIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQVNSPQGFMIIEESRW-SRVDED 781
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
LR VL G IR A + +R + +R R P V + N
Sbjct: 782 LRQVLTGK--IRVASLVA--------KRQRPTLLTERPKPRFP--------SRVDIDNEV 823
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
Y+V+++ D+ LL+ + TLTD+ + A I+T
Sbjct: 824 SSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKIST 862
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L LTDL L I A IS+ DVF+V D
Sbjct: 816 RVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKD 875
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G+K+T + I + L
Sbjct: 876 IFGHKITSVERLEEIREKL 894
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 58/237 (24%)
Query: 5 EWPACL--DEYEKLVIR--MNTPRVVID------NAVCPTATLVKVDSARRHGI------ 48
E+PA +E + IR ++ P VI +A+ P L V + G
Sbjct: 661 EYPAAAVREELRAMTIRHLLSNPAAVIAEHVKILHALEPGGVLTHVTHVQEGGYSTYSIC 720
Query: 49 ---------LLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIE 99
++ V +N+L + + SS+G+ +D+ V G + +ES S ++
Sbjct: 721 TWDIPGLFSMITGVMAANGINILGAQIHTSSNGKV-LDILQVNSPQGFMIIEESRWSRVD 779
Query: 100 QSLETIHYGR-------------------------------SNSFNGLTALELTGTDRVG 128
+ L + G+ + + T +++ D+VG
Sbjct: 780 EDLRQVLTGKIRVASLVAKRQRPTLLTERPKPRFPSRVDIDNEVSSDYTVIDIYTHDKVG 839
Query: 129 LLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
LL + + L DL + AK+ T ++A + YVKD G I ++++ I +LR
Sbjct: 840 LLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDI-FGHKITSVERLEEIREKLR 895
>gi|359483492|ref|XP_002273615.2| PREDICTED: glycogen phosphorylase 1-like [Vitis vinifera]
Length = 981
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V +D AV +T + + + G+L +V L L I KA + +G FF F V
Sbjct: 64 TPTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQKFFV 123
Query: 82 TDLNGNKLTDESVISYIEQS-LETIHYG 108
TD +G K+ D+ + I ++ LE I G
Sbjct: 124 TDSHGRKIEDQENLDRITKALLEAIDGG 151
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 21 NTPR----VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFM 76
N PR V++D T+++V + R G+L L L++ I+ A IS+ G
Sbjct: 771 NLPRKDDIVLVDEEASDFYTIIEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVA 830
Query: 77 DVFHVTDLNGNKLTDESVISYIEQSL 102
DVF+VTDL+GNKL D + I SL
Sbjct: 831 DVFYVTDLSGNKLMDYEMHEKIRVSL 856
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V I N + AT+++ R G+L + VL D L + A I G DVF+V
Sbjct: 828 TPSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERATDVFYV 887
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLL 130
T + KL DE++ + L + +F+ A R +L
Sbjct: 888 THKD-EKLVDEAISESVRNGLLAVFSENETAFDKKAAQRGIARARASVL 935
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + I+N T+++V R G+L + ++ LNL I A++++ G DVF+VT
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++T + + I+++L
Sbjct: 899 DLLGAQITAPTRQAAIKRAL 918
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 738 GVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISIRREYDRDEDEG 797
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G K+ + AV A R L
Sbjct: 798 ------RRATRIGEIIEEVLEG-------KLRLPEAV------------ARRATSSKTKL 832
Query: 229 RHSTDYPVVTVQN-WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
R P +++ N W+DR Y+V+ V DR LL+ + ++ + + A + T GERA
Sbjct: 833 RAFVVEPEISINNNWSDR-YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERA 891
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 894 DLLAHKITNQNRLKAIEKRL 913
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL D+ C L + + A I T GERA
Sbjct: 834 PSVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERA 886
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P D ++ R++
Sbjct: 765 DHPGIFARIVGALALVGANVVDARSYTTKDGYVTDAFWIQD-SEGHPF-DPMRLHRLKQM 822
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A + D+ +R + T +T N
Sbjct: 823 IEKTLKGEVIARDA-----------------LKSRDKIKKRERAFKVPTH---ITFDNEG 862
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + +A I T GE+
Sbjct: 863 SEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQ 905
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 856 ITFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDM 915
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +++ L
Sbjct: 916 FGLKYYSESKQRMLDRKL 933
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V I+N T+++V R G+L E ++ LNL I A++++ G DVF+VT
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G ++ + + I+ +L
Sbjct: 897 DLLGAQINAPTRQAAIKSAL 916
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLI-----YVKDCNSG 168
G+T L + D LLS + A ++V+A+++T +GR I Y +D + G
Sbjct: 737 GVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISREYERDEDEG 796
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
++ RI + VL+G ++ ++A T + H+ +
Sbjct: 797 ------RRATRIGETIEQVLEG-----KLRLPDAVARRTTRGKQHKAFSVE--------- 836
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V++ N Y+V+ V DR LL+++ ++ + + A + T GERA
Sbjct: 837 ------PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERA 889
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V IDN T+++V+ R G++ + L L L I A+I++ G +DVF+V
Sbjct: 825 APQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYV 884
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G+K+T+ + +E+ L
Sbjct: 885 KDVIGHKVTNANKKKAVERHL 905
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDS 174
+T L L D GL + A L ++V+AK++T +G +++V+D G I +
Sbjct: 727 VTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPE-GLAISEQ 785
Query: 175 QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++I R+E +R VL G+ I + S +
Sbjct: 786 RRIIRLEEMIRKVLSGE--ISAPDAIESRTRRERRAEAFSVA------------------ 825
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A Y+V+ V DR L+ + L + + A I T GERA
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERA 878
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V+++N + T+++V R G+L + + + LNL I A+IS+ G +DVF+VTDL
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 85 NGNKLTD 91
G K+ +
Sbjct: 903 TGQKIAN 909
>gi|332187387|ref|ZP_08389125.1| protein-P-II uridylyltransferase [Sphingomonas sp. S17]
gi|332012548|gb|EGI54615.1| protein-P-II uridylyltransferase [Sphingomonas sp. S17]
Length = 914
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+V+V + R +L + L + I A++++ G +DVF++
Sbjct: 821 APNVLIDNRASNRFTVVEVHARDRPALLNQLAHALFQSKVTIHSAHVATYGERAVDVFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+++T+ + +E+ L
Sbjct: 881 TDLTGDRITNSGRLKTLEKRL 901
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 26/177 (14%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + + ++++A++ T +A ++ G P +D
Sbjct: 721 RGATLVSIYAADHPGLFYRIAGAIHVAGGNIIDARIHTTRDGMAIDNFLVQDPLGRPFDD 780
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R+ + + L N + ADR + V +
Sbjct: 781 PGQLSRLRRAIEDALANRNKL-----------------------ADRLVAKPSVRPRADA 817
Query: 234 YPV---VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+P+ V + N A ++VV V +DR LL + L + + A + T GERA
Sbjct: 818 FPIAPNVLIDNRASNRFTVVEVHARDRPALLNQLAHALFQSKVTIHSAHVATYGERA 874
>gi|145355046|ref|XP_001421782.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582020|gb|ABP00076.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 447
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 93 SVISYIE--QSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVW 150
S I +E + LE +H +S L L++ DRVGLL +V L +LQ +V A V
Sbjct: 124 STIPSVESFEMLEQMHANQS-----LYILQVEAHDRVGLLHDVTLALWELQLTVHRAHVT 178
Query: 151 THN-GRIASLIYVKD-----CNSGSPIEDSQQIDRIEARLRNVLKGDNDI--RSAKMTVS 202
T G+ L YV D N + S+++ + AR L N + +
Sbjct: 179 TAPCGKAVDLFYVTDDLHELPNPSRVGDISRRVKPVVARTPEALNRVNILVHPAPSFVTR 238
Query: 203 MAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
T T R M+ + + PV + T V V N +++V ++ +DR LL+
Sbjct: 239 QGRTKTLRESSGMIVTE---AKPPVFDYET---TVEVDNLMSPAHTVFQIRTRDRQGLLY 292
Query: 263 DVVCTLTDMEYVVFHATIN 281
D + D++ V +A I
Sbjct: 293 DCLRVSKDLKVSVSYAKIE 311
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCN---SGSP 170
+T + + +D GL S + LA ++V+A++ T NG +V+D +G
Sbjct: 740 AVTEVTVYCSDHPGLFSRIAGALAVAGATIVDARIHTMTNGMALDTFWVQDAQPGGAGGA 799
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ S ++ R+ + L G RL+ ++ R R P
Sbjct: 800 FDASHKLARLSVLIEQALSG--------------------RLN-LVQEIRKVRREPARLR 838
Query: 231 STDYP-VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ P V + N+A +++V+ + +DR LL DV +++ + A I T G RA
Sbjct: 839 AVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRA 896
Score = 43.9 bits (102), Expect = 0.098, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVIDN T T+++++ R G+L + +++ L I A+I++ G +DVF+V D
Sbjct: 845 RVVIDNFASNTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKD 904
Query: 84 LNGNKLTDE 92
+ G K+ ++
Sbjct: 905 VFGLKVEND 913
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
N T +EL G DR GLL +V A +++ + A + T+ R + YVKD
Sbjct: 854 NTHTVIELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKD 904
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 11 DEYEKLVIR---------MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNL 61
DEY ++ R P+V I N T+V++ + R G+L + ++ D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 62 LIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
++ A I++ G DVF VTD + L+D + + ++Q++ T
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVT 883
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I +S +F +D + V + G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I QSL + H+ +++ +T +ELT D
Sbjct: 764 KRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+++ + D SV AK+ T R+ + +V D ++ P+ D + R++
Sbjct: 824 RPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPELCARLQ 878
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A +A L ++ +A++ T + Y V + GS
Sbjct: 701 FEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIG 760
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
++ ++I +I L + L ++ S +RR+ + L+H
Sbjct: 761 DNPKRIQQIRQSLIDTLMHPDEYPSI----------IQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +VV + DR LL + D + V +A I T GER
Sbjct: 799 AFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGER 853
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 21 NTPRVVIDNAV---CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFM 76
N P V+I AT + + + +H V ++ LNL I A I+S +F +
Sbjct: 687 NDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 77 DVFHVTDLNGNKLTDESV-ISYIEQSL--------------------ETIHYG------- 108
D + V D +G ++ D I I + L + H+
Sbjct: 747 DTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTI 806
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
+++ +T LEL DR GLL+ + + + S+ AK+ T R+ + +V D N+
Sbjct: 807 SNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTDANN- 865
Query: 169 SPIEDSQQIDRIE 181
P+ D + R++
Sbjct: 866 QPLSDPELCRRLQ 878
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF V
Sbjct: 801 PPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + ++ ++
Sbjct: 861 TDANNQPLSDPELCRRLQDAI 881
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + Y V D + G
Sbjct: 700 EFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYIVLDADGGRI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ +I I L + LK +D + +RR+ + L+H
Sbjct: 760 GDNPARIREIREGLIDALKNPDDYPAI----------IQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGER 853
>gi|313672568|ref|YP_004050679.1| UTP-glnb uridylyltransferase, glnd [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939324|gb|ADR18516.1| UTP-GlnB uridylyltransferase, GlnD [Calditerrivibrio nitroreducens
DSM 19672]
Length = 856
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
K + ++N ++ DN P T+V + + G+L + V L + ++KA IS+D
Sbjct: 766 KKIFKVNR-KIEFDNVTSPIYTIVDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNR 824
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSL 102
+D F++TD GNK+ D+S++ I + +
Sbjct: 825 VVDSFYITDEFGNKIEDKSMLQTIREEI 852
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + G P E S ++ R+
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDAD-GHPFE-SDRLPRLRN 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
++ LKG+ R A + D+ +R R T +T N
Sbjct: 797 MIQKTLKGEVVPREA-----------------IKSRDKLKKRERAFRVPTH---ITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + A I T GE+
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQ 880
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES + +E+ L
Sbjct: 891 FGLKFHSESKRAALERKL 908
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R I N + T+++V S R G+L +V D+++ ++ A IS+ G D+F ++D
Sbjct: 808 RTYISNDIVSGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISD 867
Query: 84 LNGNKLTDESVISYIEQSL 102
+ GN L+D ++ + +++ +
Sbjct: 868 IEGNPLSDPNLCAELQKEI 886
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
+G T LE+ DR GLL+ + V D+ + AK+ T R+ + ++ D G+P+ D
Sbjct: 817 SGHTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDI-EGNPLSD 875
Query: 174 S 174
Sbjct: 876 P 876
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V S G+L + L D ++L++ A++S+ G +D F+V
Sbjct: 730 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYV 789
Query: 82 TDLNGNKLTD---ESVISYIEQSL 102
T G L ESV +E++L
Sbjct: 790 TGPEGAPLPGDEAESVARKLEETL 813
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLN-------GNKL 89
++ V+ + G+ + +++ D L I K +S+DG + V V + +
Sbjct: 26 IITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLPMSCSYLI 85
Query: 90 TDESVISYIEQSLETIHYGRSNSFNG-LTALELTGTDRVGLLSEVFAVLADLQCSVVEAK 148
E + L + + + S + + L+ DR GLL +V VL++L+ ++ + K
Sbjct: 86 LKERLQKICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELELTIQKVK 145
Query: 149 VWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRN-VLKGDNDIRSAKMTVSMA 204
V T +GR+ L +V D + Q +R+ A LR+ + + + + +
Sbjct: 146 VTTTPDGRVLDLFFVTDNKELLHTRNRQDETCERLNAVLRDSCISCELQLAGPEYEYNQG 205
Query: 205 VTHTERRLHQMMF----ADRDYERMPVLRHSTDYPV--VTVQNWADRSYSVVNVQCKDRT 258
++ L + +F +D + + T VT+ N ++++V ++C D
Sbjct: 206 ISSLSPALAEELFRCELSDNEVRAQALSPDMTKLKKTNVTMDNSLSPAHTLVQIRCADHK 265
Query: 259 KLLFDVVCTLTDMEYVVFHA--TINTAGER 286
LL+D++ TL D+ + + + N+ G R
Sbjct: 266 GLLYDIMRTLKDLNMKISYGRFSPNSMGYR 295
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--M 76
++ V +DN++ P TLV++ A G+L + ++ L DLN+ I S + + +
Sbjct: 238 KLKKTNVTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDL 297
Query: 77 DVFHVTDLNGNKLTDE----SVISYIEQ----SLETIHYGRSNSFNGLTA--LELTGTDR 126
D+F + +G K+ D ++ S ++Q L I R L A +EL+G R
Sbjct: 298 DIF-IQQKDGKKILDPEKQSALCSRLKQEMLHPLRVIIANRGPDTELLVANPVELSGMGR 356
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ +V L + V A+V H+
Sbjct: 357 PRVFYDVTFALKTVGICVFSAEVGRHS 383
>gi|393770938|ref|ZP_10359414.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
gi|392723594|gb|EIZ80983.1| uridylyltransferase [Novosphingobium sp. Rr 2-17]
Length = 924
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV+ DN T+V+V++ R +L L + L++ A+I++ G D F+VT
Sbjct: 831 PRVLFDNKGSNRFTVVEVNARDRPALLNRLAHALFESRLMVHSAHIATYGERAADTFYVT 890
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA 118
DL G K+ + + +E+ L + N+ G+ A
Sbjct: 891 DLFGEKVIGTARLKALERRL--LDAASENTVEGVAA 924
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 22/177 (12%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSP 170
S G T + + +D GL + + ++++A++ T NGR V+D G P
Sbjct: 728 SARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRNGRAVDNFLVQDP-LGRP 786
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q+ R+ + N L I + V + R F R
Sbjct: 787 FMEASQLARLATSIENALANRVHI------LPQLVARPDARPRADAFEVR---------- 830
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V N ++VV V +DR LL + L + +V A I T GERA
Sbjct: 831 ----PRVLFDNKGSNRFTVVEVNARDRPALLNRLAHALFESRLMVHSAHIATYGERA 883
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T++++++ R +L + L + I A++++ G +D F++
Sbjct: 833 APNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 892
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TDL G+K+ S + IE+ L
Sbjct: 893 TDLTGDKIAAPSRLKTIERRL 913
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 733 RGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGRPFDE 792
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
S Q+ R++ + + L R + MA T R A
Sbjct: 793 SAQLSRLKQAIEDALAN----RGKMIDRLMAKPLTRPRAEAFAIA--------------- 833
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ + +DR LL + L + + A + T GERA
Sbjct: 834 -PNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYGERA 886
>gi|225849566|ref|YP_002729800.1| (Protein-PII) uridylyltransferase [Persephonella marina EX-H1]
gi|225645832|gb|ACO04018.1| putative (Protein-PII) uridylyltransferase [Persephonella marina
EX-H1]
Length = 866
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +DN T+ V R G+L + +V T NL + A + + G D F+V
Sbjct: 780 VKVDNETSDIYTIFDVSGEDRIGLLFDIFRVFTRFNLFVHIAKVVTQGERIRDAFYVRTF 839
Query: 85 NGNKLTDESVISYIEQSL 102
+ KLTDE +I +++ L
Sbjct: 840 DKEKLTDELIIKEVKEEL 857
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T V + + R G+L ++ +L++ A I++ G DVF +TD
Sbjct: 800 QVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITD 859
Query: 84 LNGNKLTDESVISYIEQSLE 103
L+G ++D ++ ++Q+L+
Sbjct: 860 LDGEPVSDPTLCQELQQTLK 879
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 29/156 (18%)
Query: 37 LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVIS 96
LV+V + R G+ + VL L +++A +S+D +D +HV +G + E+
Sbjct: 619 LVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARADREA--- 675
Query: 97 YIEQSLETIHYGRSNSFNGL-------------------------TALELTGTDRVGLLS 131
+E+++ + G L T LEL TDR GLL
Sbjct: 676 -LERAMLRLRSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLLH 734
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
+V LA L SV A V T+ G+ +Y+ + +
Sbjct: 735 DVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTEPDG 770
>gi|162451413|ref|YP_001613780.1| protein-PII uridylyltransferase [Sorangium cellulosum So ce56]
gi|161161995|emb|CAN93300.1| probable protein-PII uridylyltransferase [Sorangium cellulosum So
ce56]
Length = 953
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR GLL + L L S+ AK+ T R+A + YV D + G+ I + ++
Sbjct: 873 TVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDAD-GTKIANGKR 931
Query: 177 IDRIEARLRNVLKG 190
+E RL VL+G
Sbjct: 932 TQEVEERLHAVLQG 945
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+++V + R G+L L L L I A I+++G DVF+V+D +G K+ +
Sbjct: 873 TVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGTKIANGKRT 932
Query: 96 SYIEQSLETIHYG 108
+E+ L + G
Sbjct: 933 QEVEERLHAVLQG 945
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 9 CLDEYEKLVIRMNTPRVV----IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK 64
LD +K+ R + RV DN T+++VD+ R G+L + +VL N+ I
Sbjct: 829 ALDSRDKIKKRESKFRVPTSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIA 888
Query: 65 KAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYG 108
A I++ G +DVF+V D+ G K ES +E+ L E I G
Sbjct: 889 TAQIATYGAQVVDVFYVKDMFGMKFHSESKRRTLEKKLREAIDQG 933
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
TD G+ S + LA + +VV+A+ +T A+ ++ N G+P E + ++ R+
Sbjct: 757 TDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQA-RLPRLRQM 815
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ +L+G+ R A + D+ +R R T ++ N
Sbjct: 816 IDKILRGEMGARQA-----------------LDSRDKIKKRESKFRVPTS---ISFDNEG 855
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
++++ V +DR LL+D+ L + A I T G
Sbjct: 856 SEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYG 896
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 46 HGIL--LEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLE 103
HGI L L N++ + Y S DG + VF + D +GN +++ + + Q ++
Sbjct: 760 HGIFSRLAGALALVGANVVDARTYTSKDG-YATAVFWIQDNDGNPF-EQARLPRLRQMID 817
Query: 104 TIHYGRSNSFNGL-----------------------------TALELTGTDRVGLLSEVF 134
I G + L T +E+ DR GLL ++
Sbjct: 818 KILRGEMGARQALDSRDKIKKRESKFRVPTSISFDNEGSEIFTIIEVDTRDRPGLLYDLT 877
Query: 135 AVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL-KGDND 193
VLA S+ A++ T+ ++ + YVKD G + +E +LR + +G
Sbjct: 878 RVLAANNVSIATAQIATYGAQVVDVFYVKDM-FGMKFHSESKRRTLEKKLREAIDQGAER 936
Query: 194 IRSA 197
RSA
Sbjct: 937 ARSA 940
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVI N + T V + + R G+L ++ +L++ A I++ G DVF +TD
Sbjct: 800 QVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITD 859
Query: 84 LNGNKLTDESVISYIEQSLE 103
L+G ++D ++ ++Q+L+
Sbjct: 860 LDGEPVSDPTLCQELQQTLK 879
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + L+ + +VV+A+ +T A+ + + G+P ED + + R+
Sbjct: 755 ADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSEGTPYEDIR-LPRLREV 813
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ LKG+ R A + D+ +R R T +T N
Sbjct: 814 IERTLKGEVVARDA-----------------LAGKDKVKKREKAFRVKTS---ITFDNEG 853
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYCCI 303
Y+++ V +DR LL D+ TL + + A I T GE+ V++ + +
Sbjct: 854 SEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQ---VVDTFYVKDMFGLK 910
Query: 304 YSA 306
Y A
Sbjct: 911 YHA 913
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 847 ITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDM 906
Query: 85 NGNKLTDESVISYIEQSL 102
G K + +E L
Sbjct: 907 FGLKYHAQGKRDALENKL 924
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGDNP 763
Query: 92 -------ESVISYIEQSLE----------------------TIHYGRSNSFNGLTALELT 122
E +I ++ E TIH +++ +T LELT
Sbjct: 764 ARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTILELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + +V D N+ P+ D + R++
Sbjct: 821 APDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANN-QPLSDPELCARLQ 878
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF V
Sbjct: 801 APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + + +++++
Sbjct: 861 TDANNQPLSDPELCARLQETI 881
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV-KDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + YV D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ +I +I L LK ++ T +RR+ + L+H
Sbjct: 760 GDNPARIKQIREGLIEALKNPDEY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGER 853
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ S + LA + +VV+A+ +T +G ++ +V+D + G P D ++ R+
Sbjct: 747 SDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGD-GHPY-DPHKLPRLRG 804
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ +L+G+ R T ++ +RD+ R+P + N
Sbjct: 805 TIGKILRGEVIAREGLDTRD-----------KIKKRERDF-RVPT--------SIAFDNE 844
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYCC 302
Y++V V +DR LL+D+ TL + A I T G A +V Y D
Sbjct: 845 GSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYG--AQVVDTFYVKDMFGLK 902
Query: 303 IYSAFK 308
IYS K
Sbjct: 903 IYSDAK 908
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+V+VD+ R G+L + + L ++ I A I++ G +D F+V D+
Sbjct: 839 IAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDM 898
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNSFN 114
G K+ ++ + +E+ L E I G + + N
Sbjct: 899 FGLKIYSDAKQAALERKLREAIDSGAARARN 929
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
PA LD + P V+ID AT+V+V R G L++ ++ L DL L + K
Sbjct: 68 PASLDS-------VPMPIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKG 120
Query: 67 YISSDGRFFMDVFHVTDLN-GNKLTD----ESV--------ISYIEQSLETIHYGRSNSF 113
+S++G F++T L+ G K+ D ES+ + Y +S + + G +
Sbjct: 121 TVSTEGSVKQTKFYLTRLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGI 180
Query: 114 NGL---------------------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
+ L L DR GLL EV +LAD+ V A++ T
Sbjct: 181 QPPEKKLDVDIATHVHVKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTE 240
Query: 153 N 153
Sbjct: 241 G 241
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE +++L D+N+ ++ A I ++G D FHV+
Sbjct: 202 PKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 251
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VV+DN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 856 PTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 915
Query: 83 DLNGNKLTDESVISYIEQSL 102
G KL D ++ ++ L
Sbjct: 916 TSEGGKLADVRKVTTLKADL 935
>gi|302554421|ref|ZP_07306763.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302472039|gb|EFL35132.1| protein-P-II uridylyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 833
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V S G+L + L D N+ ++ A++S+ G +D F+V
Sbjct: 748 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDANVRVRSAHVSTLGANAVDAFYV 807
Query: 82 TDLNGNKLTD---ESVISYIEQSL 102
T G L ESV +E++L
Sbjct: 808 TGPEGAPLPGDEAESVARKLEETL 831
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 39/227 (17%)
Query: 77 DVFHVT------DLNGNKLTDESVISYIEQSLETIHYGRSNSFNG-------LTALELTG 123
D+FHV D ++ TD + + ++Q ++T G+S S G T + L
Sbjct: 684 DLFHVLVKRLPDDYWFSERTD-VIAANMQQIIDTDSKGQSISVTGHEMPAYDATMISLYA 742
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G + + ++++A++ T +A + + G I+ + ++R+
Sbjct: 743 IDHPGFFYRISGAIHATGGNILDARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQA 802
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQ 240
+ + + IRS+ ++ R P+ + P+V +
Sbjct: 803 IEDA--ATSHIRSSNKLAAL--------------------RPPLFWRGKAFHVEPLVFID 840
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
N A ++V+ V +DR LL D+ C L + + A I T GERA
Sbjct: 841 NQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERA 887
>gi|336450592|ref|ZP_08621039.1| (protein-PII) uridylyltransferase [Idiomarina sp. A28L]
gi|336282415|gb|EGN75647.1| (protein-PII) uridylyltransferase [Idiomarina sp. A28L]
Length = 874
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
GRF D F ++++ E L + G N+ NG T L + + L +
Sbjct: 650 GRFTADYFFRHTPEQIAWHSQNIMHVQEHQLPLVLIGDENN-NGTTELFIYHHEESHLFA 708
Query: 132 EVFAVLADLQCSVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKG 190
+V AVL Q S+ +A++ T +G + V G P+ D+Q+I+ + L +VL+
Sbjct: 709 KVAAVLDSEQLSIHDAQILNTRDGYVMDTFIVLQ-QDGLPLADAQRIEEVHQHLHDVLRK 767
Query: 191 DNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVV 250
+ S++ ++S RRL R++ + T + ++N ++ ++
Sbjct: 768 RRPVPSSQRSIS-------RRL-------RNF------KVRTRVKFINLKNARRTTFELI 807
Query: 251 NVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ DR L+ + ++ + A I T GE+A
Sbjct: 808 TL---DRPGLIARLAAVFQQLDINLMAAKITTVGEQA 841
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERA 287
+ C L + + A I T GERA
Sbjct: 864 LGCALFNARLTISSAHIATYGERA 887
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPPYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERA 287
+ C L + + A I T GERA
Sbjct: 864 LGCALFNARLTISSAHIATYGERA 887
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L + L + L I A+I++ G +DVF+V+
Sbjct: 835 PLVFIDNQASDRFTVIEVNAQDRPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVS 894
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL +K+T+++ + IE+ L
Sbjct: 895 DLFSHKITNQNRLKAIEKRL 914
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 94 VISYIEQSLETIHYGRSNSFNG-------LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
+ + ++Q ++T G+S S G T + L D G + + ++++
Sbjct: 706 IAANMQQIIDTDSKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILD 765
Query: 147 AKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVT 206
A++ T +A + + G I+ + ++R+ + + + IRS+ ++
Sbjct: 766 ARIHTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDA--ATSHIRSSNKLAAL--- 820
Query: 207 HTERRLHQMMFADRDYERMPVLRHSTDY---PVVTVQNWADRSYSVVNVQCKDRTKLLFD 263
R P+ + P+V + N A ++V+ V +DR LL D
Sbjct: 821 -----------------RPPLFWRGKAFHVEPLVFIDNQASDRFTVIEVNAQDRPALLHD 863
Query: 264 VVCTLTDMEYVVFHATINTAGERA 287
+ C L + + A I T GERA
Sbjct: 864 LGCALFNARLTISSAHIATYGERA 887
>gi|255585359|ref|XP_002533376.1| amino acid binding protein, putative [Ricinus communis]
gi|223526783|gb|EEF29007.1| amino acid binding protein, putative [Ricinus communis]
Length = 413
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 25 VVIDNAVCPT-ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
VVI A P +T++ V+ + G+ + +++ L I + + +DG++ V V
Sbjct: 9 VVISQAEKPGDSTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLQTDGKWCYIVLWVVG 68
Query: 84 LNGNKLTD------ESVISYIEQSLETIHYGRSNSFNGLTALELT---GTDRVGLLSEVF 134
+ + E SY S + + + L DR GLL +V
Sbjct: 69 KPSTRWSLLKMRLLEVCPSYFSTSEISYYRPKDQQPKKPDVFLLKFWCSYDREGLLHDVT 128
Query: 135 AVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDN- 192
VL +L+ ++ KV T +GR+ L ++ D + + + + L++VL GD
Sbjct: 129 EVLCELELTIKRVKVSTAPDGRVMDLFFITD--TRELLHTKHRQEETIHYLKDVL-GDAL 185
Query: 193 ---DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS---TDYPV-VTVQNWADR 245
+I SA V+ A + L + D +P + T PV V++ N R
Sbjct: 186 ISCEIESAGAEVT-ACSQGSSLLPSAITEDMFNMELPDKQRKGFLTPNPVSVSMDNTLSR 244
Query: 246 SYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHAT 279
S++++ CKD L++D++ TL D + Y F+AT
Sbjct: 245 SHTLLQFLCKDHKGLMYDIMRTLKDYNIQISYGRFYAT 282
>gi|224100951|ref|XP_002312081.1| predicted protein [Populus trichocarpa]
gi|222851901|gb|EEE89448.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 120/275 (43%), Gaps = 33/275 (12%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD------LNGNK 88
T+V V+ + G+ + +++ + L I +A +DG++ VF V L+ +
Sbjct: 20 PTVVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVFWVVQRSNSLRLDWDS 79
Query: 89 LTDESVISYIEQSLETIHYGRSNSFNGLTA------LELTGTDRVGLLSEVFAVLADLQC 142
L + +I L ++Y + NG TA L+ DR GLL ++ VL +L+
Sbjct: 80 LKNRLLIVS-PPCLAPLYY--DHKLNGSTAAPSVYLLKFCCVDRKGLLHDITEVLTELEF 136
Query: 143 SVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTV 201
++ KV T + ++ L ++ D + ++ D L +V K S ++ +
Sbjct: 137 TIQRLKVMTTPDEKVVDLFFITD--GRELLHTKERRDNTCGYLCDVFK--EYCISCELQL 192
Query: 202 SMAVTHTERRLHQM-------MFADRDYER---MPVLRHSTDYP---VVTVQNWADRSYS 248
+ +R + +F+ E+ L +T P +VTV N +++
Sbjct: 193 AGPECENQRTFSSLPMAVAEELFSCELSEKESCTQALGTATTPPKKAIVTVDNLLSPAHT 252
Query: 249 VVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTA 283
++ +QC D+ L +D++ T D+ V + +++
Sbjct: 253 LLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSS 287
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 16/181 (8%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVFHVT 82
V +DN + P TL+++ + G+ + ++ DLN+ + SS G MD+ +
Sbjct: 241 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHNMDLL-IR 299
Query: 83 DLNGNKLTDESVISYIEQSL--ETIH--------YGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D +++ L E +H G +EL G R + +
Sbjct: 300 QTDGKKIVDPELLANTCSRLKEEMLHPLRVIITNRGPDTELLVANPVELCGKGRPRVFYD 359
Query: 133 VFAVLADLQCSVVEAKVWTHNGRIASL---IYVKDCNSGSPIEDSQQIDRIEARLRNVLK 189
V L L + A++ H+ + ++ D N P+ SQ ++I R+R L
Sbjct: 360 VTLTLKKLGICIFSAEIGRHSTQDRQWEVYRFLLDENCDVPLASSQARNQIVDRIRRTLM 419
Query: 190 G 190
G
Sbjct: 420 G 420
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V DN T+++V + R +L + L + + +I+ A+I+ G D F+VT
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+TD + + +L
Sbjct: 888 DLTGDKITDPGRLEALRAAL 907
>gi|297827181|ref|XP_002881473.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
gi|297327312|gb|EFH57732.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 18/252 (7%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + ++ D + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTDTRE--LLGTVKRRDEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT---HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
+T + + +F+ P ++ +TV N +++++++ C+D
Sbjct: 197 PEITARSQASSSVAETLFSSDVSGEHPSGLQTSSNVSITVDNLLSSAHTLIHITCQDHKG 256
Query: 260 LLFDVVCTLTDM 271
LL+D++ T D
Sbjct: 257 LLYDIMRTFKDF 268
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+VVIDN T+V+V A L Q L D L I +A I+++ +DVF+V
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 84 LNGNKLTDESVISYIEQSL 102
G+KLTD + + +L
Sbjct: 828 QAGDKLTDVEAMDKVRLTL 846
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P E S+ + R+ +
Sbjct: 712 DHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDAD-GHPFEASR-LPRLRSM 769
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L+G+ R A + D+ +R R T +T N
Sbjct: 770 IEKTLRGEVIARDA-----------------LKSRDKIKKRERAFRVPTH---ITFDNDG 809
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + +A I T GE+
Sbjct: 810 SDIYTIIEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQ 852
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 803 ITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDM 862
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 863 FGLKYHSASKQQSLEKKL 880
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
++ + RV + N T+V+V + + G+L + ++L L L I A I+++ +D
Sbjct: 809 LKKDFSRVFVHNDQSEKYTVVEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVD 868
Query: 78 VFHVTDLNGNKLTDESVISYIEQSL 102
VF+V+DL GNK+ E I I++ +
Sbjct: 869 VFYVSDLKGNKVLSEERIEGIKEQV 893
>gi|384085460|ref|ZP_09996635.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 865
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 80 HVTDLNGNKLTDESVISYIEQ-----SLETIHYGRSNSFNGLTALELTGTDRVGLLSEVF 134
H++ ++ ++ ++ +I+Q S +T+ R++ G L + G DR GL ++
Sbjct: 639 HLSGAYFSRYSENELLWHIQQILAHKSRKTLVAVRAHQPEGSEIL-IYGPDRPGLFQQIT 697
Query: 135 AVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
L ++++A++ T +GR V D NS + Q + ARLR +++G+ +
Sbjct: 698 GALDRQSLNIIDARIDTSEDGRAIDTFLVID-NSHAFARTEQADQDLAARLRAIIEGETE 756
Query: 194 IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ + H + R FA R E + V N A Y+++ V+
Sbjct: 757 SKP-----HFGLRHRDPR--HRFFAQRPAE-------------IRVDNHALSRYTLLEVR 796
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTAGER---AYLVIN 292
D LL+ V L ++ + A ++T GER + ++N
Sbjct: 797 AADHLGLLYRVGEVLRTLQLNIHGAKVSTFGERVEDTFFILN 838
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 38/167 (22%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID P AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 83 DLN-GNKLTDESVISYIEQSL------------------ET-----------------IH 106
+ G K+ D ++ I ++ ET IH
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
L +E DR GL+ E+ V+AD+ V A++ T
Sbjct: 215 VKEDGPKRSLLVIET--ADRPGLVVEMIKVMADVNIDVESAEIDTEG 259
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+++E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVS 269
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 38/167 (22%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID P AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 83 DLN-GNKLTDESVISYIEQSL------------------ET-----------------IH 106
+ G K+ D ++ I ++ ET IH
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 107 YGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
L +E DR GL+ E+ V+AD+ V A++ T
Sbjct: 215 VKEDGPKRSLLVIET--ADRPGLVVEMIKVMADVNIDVESAEIDTEG 259
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+++E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVS 269
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D G+P D ++ R+
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAE-GNPY-DVSRLPRLRQ 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A + D+ +R V + T +T N
Sbjct: 803 MISKTLKGEILARDA-----------------LKSRDKVKKREKVFKVPTH---ITFDNE 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ +L++ + +A I T GE+
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQ 886
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 837 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 897 FGLKYYTESKQKTLEKRL 914
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 110/248 (44%), Gaps = 16/248 (6%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDES 93
+++ V+ + G+ + +++ L I + S+DG++ VF V + + L +
Sbjct: 21 SVITVNCPDKTGLGCDLCRIILFFGLSIVRGDFSTDGKWCYIVFWVAGNSSTRWGLLKKR 80
Query: 94 VISYIEQ--SLETIHYGRSNSFNG-----LTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++ S I Y R + L+L DR GLL V VL +L+ ++ +
Sbjct: 81 LLGVCPSCSSASGIPYYRDELLQPPRPPDVFLLKLCCHDRRGLLHNVTEVLCELELTIRK 140
Query: 147 AKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +GR+ L +V D + + +++ + +L++V+ GD I V +
Sbjct: 141 VKVSTTPDGRVMDLFFVTD--TRELLHTNKRKEETYGQLKSVI-GDGMISCDIEMVGPEI 197
Query: 206 THTE---RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLF 262
T L + D + +P ++ VT+ N +++V + C+D LL+
Sbjct: 198 TACSLESSSLPTTITEDMLHWEVPPGSLTSISVSVTMDNSLSPGHTLVQIACQDHKGLLY 257
Query: 263 DVVCTLTD 270
D++ TL D
Sbjct: 258 DIMRTLKD 265
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 40/164 (24%)
Query: 26 VIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLN 85
+ID AT+V++ R G LL+ ++ L DL L + K +S+D FH+ L
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 86 GNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE------------- 120
G K+ D +++ Y +S E + G F G+ A E
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKAPENKIDVEVATHVIV 116
Query: 121 -----------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ DR GLL EV ++ D+ C V A++ T
Sbjct: 117 EDDGPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEG 160
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
K+ + + T +V D+ P +++ +++A R G+LLE ++++TD+N ++ A I ++G
Sbjct: 105 KIDVEVATHVIVEDDG--PKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLV 162
Query: 75 FMDVFHVTDLNGNKL 89
D FHV+ G KL
Sbjct: 163 AKDKFHVS-YRGAKL 176
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + G P E + ++ R+
Sbjct: 739 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDAD-GHPFE-ADRLPRLRN 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
++ LKG+ R A + D+ +R R T +T N
Sbjct: 797 MIQKTLKGEVVPREA-----------------IKSRDKLKKRERAFRVPTH---ITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + A I T GE+
Sbjct: 837 GSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQ 880
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K +S + +E+ L
Sbjct: 891 FGLKFHSDSKRAALERKL 908
>gi|372280408|ref|ZP_09516444.1| PII uridylyl-transferase [Oceanicola sp. S124]
Length = 921
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +V+D G+P E S+ + R+
Sbjct: 739 ADHPGIFARLSGALALVGANVVDARTYTTVDGYATAAFWVQDAE-GAPYEASR-LPRLTQ 796
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ +L+G+ R A M DR +R + ST V N
Sbjct: 797 MIHKILRGEVVTREA-----------------MQDRDRIKKRERAFKVSTS---VAFDNE 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL D+ TL + A I T GE+
Sbjct: 837 GSEIYTIIEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQ 880
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 VAFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL-ETIHYGRSNS 112
G KL +S +E L E I G+ +
Sbjct: 891 FGLKLFSDSKQKALEAKLREAIAAGQERA 919
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VV+ A AT+ +V + R G+L ++L+D L ++ A + + G +DVF+VT
Sbjct: 684 PPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVT 743
Query: 83 DLNGNKLTDESVISYIEQSLET 104
D G L+ E+ + ++LET
Sbjct: 744 DTAGKPLS-EAAAEEVRRALET 764
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA + +VV+A+ +T +G + +++D G+P D ++ R+
Sbjct: 745 ADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAE-GNPY-DVSRLPRLRQ 802
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A + D+ +R V + T +T N
Sbjct: 803 MISKTLKGEILARDA-----------------LKSRDKVKKREKVFKVPTH---ITFDNE 842
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ +L++ + +A I T GE+
Sbjct: 843 GSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQ 886
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L++ N+ I A I++ G +D F+V D+
Sbjct: 837 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDM 896
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 897 FGLKYYTESKQKTLEKRL 914
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D GL S + LA + +VV+A+ +T +G + +V+D + G P E + ++ R+
Sbjct: 733 SDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDAD-GRPFE-AARLPRLRQ 790
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ + G+ R A M + ER +P L +T N
Sbjct: 791 MIDRTMNGEVVPREA-MKERDKIKKRERAFT-----------VPTL--------ITFDNE 830
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
Y+++ V +DR LL D+V TL + A I T GE+A
Sbjct: 831 GSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQA 875
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + V+ L N I A I++ G +D F+V D+
Sbjct: 825 ITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDM 884
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K E +E L E I G
Sbjct: 885 FGLKFHAEGRRQQLEAKLREAIKQG 909
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 33/165 (20%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V+ID AT+V++ R G L++ ++ L L+L ++K ++++G F +
Sbjct: 95 TPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFI 154
Query: 82 TDLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
T ++G K+ D +++ Y +S E + G +
Sbjct: 155 TRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIH 214
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L + DR GLL E+ ++ D+ V A++ T
Sbjct: 215 VKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEG 259
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS 269
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DR+G L + A L +L+ ++ AK+ G A+ Y+ D + I S +++ I +
Sbjct: 98 DRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYITDALTSEKILKSARLEEIRLTI 155
Query: 185 -RNVLKGDNDIRSAKMTVSMAVTHTER-RLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
N+LK + +A + A TE LH + D P ++ S V V
Sbjct: 156 FNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRD-----TPKIKTS-----VEVSEE 205
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
++S V+++ +DR LL D+V TL D+ V A ++T G A
Sbjct: 206 ESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVA 250
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 30/177 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++A
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCLRLQA 879
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|395491855|ref|ZP_10423434.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26617]
Length = 914
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+++V++ R +L + L + I A++++ G +D F++
Sbjct: 821 APNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ S + IE+ L + G
Sbjct: 881 TDLTGEKIGAGSRLRTIERRLLSAAAG 907
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 721 RGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFDE 780
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R++ + + L N ++ ++ + T E P+
Sbjct: 781 DGQLVRLKKAIEDALA--NRVKLVDRLLAKPLPRTR------------AEAFPIA----- 821
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL + L + + A + T GERA
Sbjct: 822 -PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERA 874
>gi|404254714|ref|ZP_10958682.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26621]
Length = 914
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V+IDN T+++V++ R +L + L + I A++++ G +D F++
Sbjct: 821 APNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYL 880
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
TDL G K+ S + IE+ L + G
Sbjct: 881 TDLTGEKIGAGSRLRTIERRLLSAAAG 907
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 721 RGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFDE 780
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
Q+ R++ + + L N ++ ++ + T E P+
Sbjct: 781 DGQLLRLKKAIEDALA--NRVKLVDRLLAKPLPRTR------------AEAFPIA----- 821
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL + L + + A + T GERA
Sbjct: 822 -PNVLIDNKASNRFTVIEVNARDRPALLHQLAHALFQSKVTIHSAHVATYGERA 874
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + ++V+A+ +T +G ++ +V+D + G P E ++ + R+
Sbjct: 733 DHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQD-SEGRPYEVAR-LPRLRGM 790
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQN 241
+ LKG+ R A ADRD +R R T +T N
Sbjct: 791 IDKTLKGEVLPREA-------------------LADRDKVKKREREFRFPTH---ITFDN 828
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 829 EGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFG 871
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 824 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDM 883
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E L
Sbjct: 884 FGLKLHTKAKQEALETKL 901
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 34/165 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V+V R G L++ ++ L DL L + K +S++G F++T
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 83 DLN-GNKLTD----ESV--------ISYIEQSLETIHYGRSNSFNGL------------- 116
L+ G K+ D ES+ + Y +S + + G +
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L L DR GLL EV +LAD+ V A++ T
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEG 245
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE +++L D+N+ ++ A I ++G D FHV+
Sbjct: 206 PKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS 255
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 30/196 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKL-TDE 92
T + + + +H V + LNL I A I +S +F +D + V D +G+ + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNP 763
Query: 93 SVISYIEQSLETI--------------------HYG-------RSNSFNGLTALELTGTD 125
I I L T H+ +++ T LE+ D
Sbjct: 764 ERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q R++ L
Sbjct: 824 RPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQFCLRLQQALV 882
Query: 186 NVLKGDNDIRSAKMTV 201
L+ +N+ + + ++
Sbjct: 883 KELQQENEQQPSPSSI 898
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I+ I L L+ +D +T +RR+ + L+H
Sbjct: 760 GNNPERIEEIRNGLITALRNPDDY----------LTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++ID I L L+ +D +T +RR+ + L+H
Sbjct: 760 GNNPERIDEIRKGLIAALRNPDDY----------LTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKL-TDE 92
T + + + +H V + LNL I A I +S +F +D + V D +G+ + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNP 763
Query: 93 SVISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I + L + H+ +++ T LE+ D
Sbjct: 764 ERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q R++ L
Sbjct: 824 RPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQFCLRLQQALI 882
Query: 186 NVLKGDNDIRSAKMTV 201
L+ +N+ + + ++
Sbjct: 883 KELQQENEQQPSPSSI 898
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I +S +F +D + V D +G+ + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNP 763
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
E + S + +L TIH +++ T LE+
Sbjct: 764 ERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIH---NDTQRPQTILEII 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
DR GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQFCLRLQQ 879
Query: 183 RLRNVLKGDNDIRSAKMTV 201
L L+ +N+ + + ++
Sbjct: 880 ALVKELQQENEQQPSPSSI 898
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 760 GNNPERIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DADNQPLSDPQFCLRLQQAL 881
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I +S +F +D + V D +G+ + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGNNP 763
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
E + S + +L TIH +++ T LE+
Sbjct: 764 KRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIH---NDTQRPQTILEII 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
DR GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQFCLRLQQ 879
Query: 183 RLRNVLKGDNDIRSAKMTV 201
L L+ +N+ + + ++
Sbjct: 880 ALVKELQQENEQQPSPSSI 898
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 760 GNNPKRIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
+ RV IDN V T++ + + + GIL + LT+L L I + IS+ DVF+V
Sbjct: 814 SARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYV 873
Query: 82 TDLNGNKLTDESVISYIEQSL 102
D+ G+K+T+ + I + L
Sbjct: 874 KDIFGHKITNPERLEEIRERL 894
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 20/173 (11%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGS 169
S G + + D GL S + V+A +++ A++ T NG+ ++ V + G
Sbjct: 709 ESDGGYSNFTICTLDVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQV-NSPQGF 767
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
I D + R+ LR VL G + S +R + A++ R
Sbjct: 768 IITDVGRWKRVNEDLRQVLTGKTPVASL----------VAKRQRPTLLAEKAKPRFSAR- 816
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
V + N Y+V+++ D+ +L+ + TLT++ + + I+T
Sbjct: 817 -------VEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKIST 862
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+Y+K P + DN T+++VD+ R +L + +VL N+ I A I+
Sbjct: 791 DKYKKRERAFKVPTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIA 850
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G KL ++ IE+ L
Sbjct: 851 TYGEQVVDTFYVKDMFGLKLHSKTKRDLIEKKL 883
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +VV+A+ +T +G ++ +++D + G+P ED + I R+
Sbjct: 715 DHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQDAD-GAPYEDVR-IPRLRET 772
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+R L G+ R A + D+ +R + T +T N
Sbjct: 773 IRKTLTGEVVAREAVKS-----------------RDKYKKRERAFKVPTH---ITFDNEG 812
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
++++ V +DR LL+D+ L + A I T GE+
Sbjct: 813 SEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQ 855
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 47 GILLEAVQVLTD---LNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL- 102
G L AV + D L +L + + DG F MD F + NG LT+ I ++Q L
Sbjct: 704 GHLFAAVAGVLDSQQLTILDAQILATRDG-FVMDTFVLLQRNGKPLTETRRIEEVKQHLL 762
Query: 103 ETIHYGRSNSFN-------------------------GLTALELTGTDRVGLLSEVFAVL 137
+ +H R N G T EL DR GL++ + A+L
Sbjct: 763 DVLHRRRKVPKNNRPLSRRLKNFSVKTQVNFLPVKHRGRTTFELVALDRPGLVARIAAIL 822
Query: 138 ADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
L S++ AK+ T G A +++ + G + D Q++
Sbjct: 823 QRLDVSLLAAKI-TTIGEQAEDLFIVSSHRGEALSDEQKL 861
>gi|383642646|ref|ZP_09955052.1| PII uridylyl-transferase [Sphingomonas elodea ATCC 31461]
Length = 915
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+++V++ R +L L + I A++++ G +D F++T
Sbjct: 823 PNVFIDNKASNRFTVIEVNARDRPALLYSLANALFQSKVTIHSAHVATYGERAVDTFYLT 882
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K++ S + IE+ L
Sbjct: 883 DLIGDKISSTSRLKTIERRL 902
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LELT
Sbjct: 764 ARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 44.3 bits (103), Expect = 0.081, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 83 DLNGNKLTD 91
G K+TD
Sbjct: 894 TTEGGKVTD 902
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D ++Q+L
Sbjct: 862 DAHNQPLSDPQFCLRLQQAL 881
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKL-TDE 92
T + + + +H V + LNL I A I +S +F +D + V D++G+ + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDVDGSPIGNNP 763
Query: 93 SVISYIEQSLETI--------------------HYG-------RSNSFNGLTALELTGTD 125
I I + L T H+ +++ T LE+ D
Sbjct: 764 ERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q R++ L
Sbjct: 824 RPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHN-QPLSDPQFCLRLQQALV 882
Query: 186 NVLKGDND 193
L+ +N+
Sbjct: 883 KELQQENE 890
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDVDGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I+ I L L+ +D + +RR+ + L+H
Sbjct: 760 GNNPERIEEIRRGLITALRNPDDY----------LNIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+ PRV I TAT+V+V + R G+L Q + L + KA + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 80 HVTDLNGNKLTDESVISYIEQSL 102
+V D G L + + +S + + +
Sbjct: 753 YVVDAQGRPLREPAALSALREKV 775
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + + LA + +VV+A+ +T +G + +++D + G P E S+ + R+ +
Sbjct: 726 DHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDAD-GHPFEASR-LPRLRSM 783
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+ L G+ R A + D+ +R R T +T N
Sbjct: 784 IEKTLHGEVIARDA-----------------LKSRDKIKKRERAFRVPTH---ITFDNDG 823
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + +A I T GE+
Sbjct: 824 SDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQ 866
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 817 ITFDNDGSDIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDM 876
Query: 85 NGNKLTDESVISYIEQSL 102
G K + +E+ L
Sbjct: 877 FGLKYHSAAKQQSLEKKL 894
>gi|87198706|ref|YP_495963.1| PII uridylyl-transferase [Novosphingobium aromaticivorans DSM
12444]
gi|123490505|sp|Q2GAJ4.1|GLND_NOVAD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|87134387|gb|ABD25129.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Novosphingobium
aromaticivorans DSM 12444]
Length = 912
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ DN T+++V + R +L + L + L++ A+I++ G +D F+VT
Sbjct: 820 PIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVT 879
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G K+ E+ + +E+ L
Sbjct: 880 DVLGEKVDSEARMKAVEKRL 899
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + + ++++A++ T NG V+D G P+ +
Sbjct: 720 GATLVTVLAADHPGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDP-LGRPLNE 778
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ QI+R++ + + L K+ +A P+ R D
Sbjct: 779 ASQIERLKNAIADALAN-----RVKLVPQLAAR-------------------PLARPRAD 814
Query: 234 ----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P+V N A ++V+ V +DR LL + L + +V A I T GERA
Sbjct: 815 AFDVRPIVIFDNKASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERA 872
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 33/165 (20%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP V+ID AT+V++ R G L++ ++ L L+L ++K ++++G F +
Sbjct: 74 TPMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFI 133
Query: 82 TDLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
T ++G K+ D +++ Y +S E + G +
Sbjct: 134 TRIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIH 193
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L + DR GLL E+ ++ D+ V A++ T
Sbjct: 194 VKDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEG 238
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 35/50 (70%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+
Sbjct: 199 PKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVS 248
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 43.9 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P VVIDN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 835 PTVVIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 894
Query: 83 DLNGNKLTDESVIS 96
G K+ D ++
Sbjct: 895 TSEGGKVADAKKVT 908
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 31 VCPTATLVKVDSARRHGILLEAVQVLTDL--NLLIKKAYISSDGRFFMDVFHVTDLNGNK 88
V A + + + R G+ + ++ L N++ + + S G+ +DVFHV D+ G
Sbjct: 732 VGANAAEIVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQA-LDVFHVQDVTGAA 790
Query: 89 LTDES--VISYIEQSLETIHYG--------------RSNSF-------------NGLTAL 119
L E+ V+ + +LE G R+ +F N T +
Sbjct: 791 LGCENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVV 850
Query: 120 ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
E +G DR GLL + LAD S+ A + + R YV+ + G + D++++
Sbjct: 851 EASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ-TSEGGKVADAKKV 907
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V V+ LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LEL+
Sbjct: 764 KRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + +V D + P+ D Q R++
Sbjct: 821 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQN-QPLSDPQLCSRLQ 878
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF V
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFV 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD L+D + S ++ ++
Sbjct: 861 TDAQNQPLSDPQLCSRLQDAI 881
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + AV+ L ++ +A++ T + + Y V D + S
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ +++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPKRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
>gi|384253079|gb|EIE26554.1| starch phosphorylase [Coccomyxa subellipsoidea C-169]
Length = 963
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTD 83
V IDNA T+V + R G+L DL L + KA + S+GR +D F +T
Sbjct: 24 VSIDNAQDSDFTVVTISGFNRPGLLTSISGTFRDLGLDVGKAEVDGSNGRV-LDKFFITA 82
Query: 84 LNGNKLTDESVISYIEQSLETI 105
L G K+TD I + SLE +
Sbjct: 83 LGGGKVTDPKDIDKLRASLERL 104
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T + ++G +R GLL+ + DL V +A+V NGR+ ++ G + D +
Sbjct: 34 FTVVTISGFNRPGLLTSISGTFRDLGLDVGKAEVDGSNGRVLDKFFITALGGGK-VTDPK 92
Query: 176 QIDRIEARL 184
ID++ A L
Sbjct: 93 DIDKLRASL 101
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ S + LA + +VV+A+ +T +G ++ +V+D + G P E + ++ R+
Sbjct: 737 SDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQD-SEGHPYE-ATKLPRLRG 794
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+ LKG+ R A DRD ++ +P +T N
Sbjct: 795 MIEKTLKGEVVARDA-------------------LKDRD--KIKKREREFRFPTHITFDN 833
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
Y++V V +DR LL+D+ L + A I T G
Sbjct: 834 EGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYG 876
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+V+VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 829 ITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDM 888
Query: 85 NGNKLTDESVISYIEQSL 102
G KL +E+ L
Sbjct: 889 FGLKLHSGQRQESLEKRL 906
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +EL TD GLLS++ VL D + +AK+ T R + Y D S +PI+D +
Sbjct: 803 FTVMELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQS-NPIQDHE 861
Query: 176 QIDRIEARLRNVLK 189
+ +E +++ L+
Sbjct: 862 TLQNLEQAIQSALR 875
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+++K P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 832 DKFKKREKAFKVPTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIA 891
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL-ETIHYG 108
+ G +D F+V D+ G K +S ++E+ L E I G
Sbjct: 892 TYGEQVVDTFYVKDMFGLKYHSKSKQDFLERKLREAISKG 931
>gi|386774319|ref|ZP_10096697.1| PII uridylyl-transferase [Brachybacterium paraconglomeratum LC44]
Length = 784
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 226 PVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
P LR + D PVVT+ A R +VV V ++R LL DV T+T V A + T G
Sbjct: 691 PPLRTTEDAPVVTLLPGASREATVVQVNARNRPSLLADVAETITVHGLQVRSAHVMTLGR 750
Query: 286 RAYLVI 291
RA V+
Sbjct: 751 RAVDVL 756
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 757 DHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTSM 814
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQN 241
+ LKG+ R A DRD +R R T + N
Sbjct: 815 IDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFDN 852
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + A I T G +
Sbjct: 853 EGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQ 897
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 848 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 907
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 908 FGLKLHQKNRQETLEKKL 925
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ D +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + ++Q++
Sbjct: 862 DADNQPLSDPQLCLRLQQAI 881
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ GSPI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLEADGSPI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I+ I + L L+ +D +T +RR+ + L+H
Sbjct: 760 GNNPERIEEIRSGLIAALRNPDDY----------LTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ + DR LL V D + V +A I T GER
Sbjct: 798 FAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGER 853
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+ DR GLL+ V + D SV AK+ T R+ + +V D ++ P+ D Q
Sbjct: 815 TILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQL 873
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTV 201
R++ + L+ +N+ + + ++
Sbjct: 874 CLRLQQAIIKELQQENEQQPSPSSI 898
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V+I N + T+V V + R G+L ++ + +LL++ A I++ G DVF +T
Sbjct: 804 QVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFITQ 863
Query: 84 LNGNKLTDESVISYIEQSLE 103
+G +TD + ++Q L+
Sbjct: 864 KDGGPVTDPDLCQRLQQRLK 883
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LELT
Sbjct: 764 ARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ V + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGER 853
>gi|410465082|ref|ZP_11318452.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981801|gb|EKO38320.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 884
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 72 GRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLS 131
G+ F+ + + G SV TI S+ F T ++++ DRVGLL
Sbjct: 765 GKLFL-AYRLAQKRGGFAASASVAGPKSPPEVTIDNKASDLF---TVIDVSCDDRVGLLY 820
Query: 132 EVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
++ LA++ AKV T GR+ + YV+ +G +ED +Q+ I+A L + L D
Sbjct: 821 DIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG-TAGRRVEDPEQLAEIKAALLHRLADD 879
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A ++V++V C DR LL+D+ TL +M A + T R
Sbjct: 793 PEVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGR 844
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 2 KDMEW-PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
+D+ W + ++E + + R +D+ V T T + V + + +L+ L L+
Sbjct: 221 EDIAWHTEAIADHENIEAPLVLVRHPLDSPVANT-TQIFVHAQDKPELLVRICIELELLH 279
Query: 61 LLIKKA--YISSDGRFFMDVFHVTDLNGNKL-TDESVISYIEQSLET---IHYGRSN--- 111
L I A Y +DG ++ F+V + +G+ + +DE+ + YI S+ET + RS+
Sbjct: 280 LSIHDARIYTGTDGAT-LNTFYVLNSDGSPIASDEANLDYIRSSIETGLASNKSRSSTRR 338
Query: 112 ------SF-------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH 152
SF G T LE+ DR GLL+ + A+ D ++ AK+ T
Sbjct: 339 TPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQTL 398
Query: 153 NGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
R+ + +V D G + ++ ++ ++ +R L G+
Sbjct: 399 GERVEDVFFVTDMQ-GRALTNNTTLEHLQTAIRETLDGE 436
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
V + I L TIH +++ +T LELT
Sbjct: 764 VRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ V + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|115480793|ref|NP_001063990.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|52076090|dbj|BAD46603.1| unknown protein [Oryza sativa Japonica Group]
gi|113632223|dbj|BAF25904.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|215700991|dbj|BAG92415.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR+GLL +V VL +L+ ++ KV T +GR+ L ++ D + + + +
Sbjct: 132 DRMGLLHDVTRVLCELELTIRRVKVSTTPDGRVLDLFFITDARE--LLHTKSRREETYDK 189
Query: 184 LRNVLKGDN----DIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
L++VL GD+ +I SA +S + + H + + E + S V +
Sbjct: 190 LQSVL-GDSLTSCEIESATEEMSSCLQASTLLPHSAVEEMFNVEVVEEQSRSCGGLSVAM 248
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGE 285
N +++++ +QC D L++D++ TL D + Y F+A+ N + E
Sbjct: 249 DNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCE 298
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G++ + ++ L D N+ I + Y S +G +D+F V
Sbjct: 246 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAVQ 305
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 306 S-DGKKIVDQ 314
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V +DN T+V+V + R G+L +VL + +++A I+++G +D F++TD
Sbjct: 788 KVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITD 847
Query: 84 LNGNKLTDESVISYIEQSL 102
++ K+TD + I++ +
Sbjct: 848 MDYKKVTDPQKLLRIKERI 866
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ + + T +V D+ P +++ +++A R G+LLE ++++TD+N+ ++ A I ++G
Sbjct: 214 KKVDVEVATHVIVQDDG--PKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGL 271
Query: 74 FFMDVFHVTDLNGNKL 89
D FHV+ G KL
Sbjct: 272 VAKDKFHVS-YRGAKL 286
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 40/167 (23%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +++D FH+
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 83 DLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE---------- 120
L G K+ D +++ Y +S E + G F G+ A E
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKAPEKKVDVEVATH 223
Query: 121 --------------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ DR GLL EV ++ D+ V A++ T
Sbjct: 224 VIVQDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEG 270
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN AT+V+ R G+L + L D L I+ A+I G +D F+V
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 83 DLNGNKLTDESVISYIEQSL 102
G K+T+ I+ ++ L
Sbjct: 894 TAQGEKITETRRINALKADL 913
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
+ + PRV + + TAT+V+V + R G+L + D L ++ A + + G +D
Sbjct: 672 VPVAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVD 731
Query: 78 VFHVTDLNGNKLTDES 93
VF+V D G LTDE+
Sbjct: 732 VFYVVDRAGRPLTDEA 747
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR+GLL +V VL +++ ++ KV T +GR+ L ++ D + + + +
Sbjct: 128 DRIGLLHDVTCVLCEMELTIRRVKVSTTPDGRVMDLFFITDARE--LLHTKSRREEAYEK 185
Query: 184 LRNVLKGDN----DIRSAKMTVSMAVTHT---ERRLHQMMFADRDYERMPVLRHSTDYPV 236
L++VL GD+ +I SA +S + + + + MF++ D R +D +
Sbjct: 186 LQSVL-GDSVTSCEIESATQDMSSCLQASALLPPLVLEQMFSEVDVVDEQSNRSRSDSRL 244
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQ 295
VT+ N ++++ +QC D LL+D++ T+ D V + AG++ ++ +
Sbjct: 245 SVTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRF-YAGQKGRCEVDLFA 303
Query: 296 FDSN 299
S+
Sbjct: 304 VQSD 307
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G+L + ++ + D N+ + + Y GR +D+F V
Sbjct: 246 VTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRFYAGQKGRCEVDLFAVQ 305
Query: 83 DLNGNKLTDESVISYIEQSLET----------IHYGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D+ + L T ++ G +E++G R + +
Sbjct: 306 S-DGKKILDQQKQRTMCSRLRTELLRPLHVALVNRGPDAELLVANPVEVSGKGRPLVFYD 364
Query: 133 VFAVLADLQCSVVEAKVWTH 152
+ L +L V A++ H
Sbjct: 365 ITLALKNLHRRVFLAEIGRH 384
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 43/189 (22%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
G + L LT DR GLL+ V VLA + + A+V++ D
Sbjct: 730 GYSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFS-------------------TPDG 770
Query: 175 QQIDRIEARLRNV--LKGDND-------IRSAKMTVSMAVTHTE-------RRLHQMMFA 218
+ R+ R +V L+G ++ R+A+ ++ + E RRL
Sbjct: 771 SDLGRLAGRALDVFELRGPDERAVEPARWRAARTDLARVLAGEEGLDALLARRLRASSLP 830
Query: 219 DRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHA 278
++ R+P V + N + R++SVV+V DR LL + T ++ V A
Sbjct: 831 EKPLPRVPT--------KVVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLA 882
Query: 279 TINTAGERA 287
I T G RA
Sbjct: 883 RIATEGHRA 891
>gi|336322370|ref|YP_004602337.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
gi|336105951|gb|AEI13769.1| UTP-GlnB uridylyltransferase, GlnD [Flexistipes sinusarabici DSM
4947]
Length = 863
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++V DN + T+V V + + G+L + V +++ + KA IS+D +D F++ D
Sbjct: 777 KIVFDNDISTLYTVVDVYTEDKVGLLYNLLTVFEKMHINVVKAKISTDVDRVVDSFYIID 836
Query: 84 LNGNKLTDESVISYIEQSLETI 105
N NK+T +S IS I+ L I
Sbjct: 837 KNKNKVTGDSEISRIKTRLMKI 858
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +++ D+VGLL + V + +VV+AK+ T R+ Y+ D N DS +
Sbjct: 789 TVVDVYTEDKVGLLYNLLTVFEKMHINVVKAKISTDVDRVVDSFYIIDKNKNKVTGDS-E 847
Query: 177 IDRIEARLRNVLK 189
I RI+ RL +LK
Sbjct: 848 ISRIKTRLMKILK 860
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 45 RHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDESV-ISYIEQSL 102
+H V + LNL I A I+S +F +D + V D +G+ + D + I + L
Sbjct: 30 QHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPARVKQIREGL 89
Query: 103 ----------ETI----------HYG-------RSNSFNGLTALELTGTDRVGLLSEVFA 135
TI H+ +++ +T LEL+ DR GLL+ +
Sbjct: 90 TEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGT 149
Query: 136 VLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
+ + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 150 IFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 187
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +T
Sbjct: 118 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFIT 177
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + S ++ ++
Sbjct: 178 DANNQPLSDPLLCSRLQDAI 197
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 17 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 76
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 77 DN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------- 117
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 118 ---PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 169
>gi|357160225|ref|XP_003578696.1| PREDICTED: uncharacterized protein LOC100833127 [Brachypodium
distachyon]
Length = 421
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 17 VIRMNTPRVVIDNAV----CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
V+++ P V D V CP T + D R V +L LN+L K +S+DG
Sbjct: 8 VVQIRHPDVAGDPTVVTISCPDKTGLGCDLCR--------VVLLFGLNVL--KGDMSTDG 57
Query: 73 RFFMDVFHVTDLNGNK----LTDESVISYIEQS----LETIHYGRSNSFNGLTA------ 118
R+ V V G L E ++ S L++ + + L
Sbjct: 58 RWCYIVLWVVARRGRTMAWDLLKERLVELCPVSSLCGLDSSYLAAAGLQEDLEPAAPRVF 117
Query: 119 -LELTGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQ 176
L+ + DR+GLL +V VL++++ ++ KV T +GR+ L ++ D + +
Sbjct: 118 LLKFSCYDRMGLLHDVTHVLSEMELTIRRVKVSTTPDGRVMDLFFITDARD--LLHTKNR 175
Query: 177 IDRIEARLRNVLKGDN----DIRSAKMTVS---MAVTHTERRLHQMMFADRDYERMPVLR 229
+ +L++VL GD+ +I A +S A + + MF E
Sbjct: 176 REEAYEKLQSVL-GDSVTSCEIECATEDMSSCLQASALLPPLVVEQMFNTDLIEEQLSRS 234
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHA 278
S+ VT+ N +S++ +QC D LL+D++ TL D + Y F+A
Sbjct: 235 RSSSKLSVTMDNSLSPVHSLIQIQCGDHKGLLYDIMRTLKDCDIQISYSRFYA 287
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D + G P E + ++ R+
Sbjct: 741 ADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAD-GHPFE-ADRLPRLRQ 798
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L+G+ R A + D+ +R R T +T N
Sbjct: 799 MIDKTLRGEVIPREA-----------------IKSRDKIKKRERAFRVPTH---ITFDND 838
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + + A I T GE+
Sbjct: 839 GSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQ 882
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L LN+ I A I++ G +D F+V D+
Sbjct: 833 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDM 892
Query: 85 NGNKLTDESVISYIEQSL-ETIHYG 108
G K E+ +++ L E I G
Sbjct: 893 FGLKFHSEAKQRSLDRKLREAISAG 917
>gi|303288045|ref|XP_003063311.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455143|gb|EEH52447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 358
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 38 VKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISY 97
V+V + G+ + + L D L+ K ++DG++ + V L + + +
Sbjct: 1 VRVTCPDKTGLAADIARTLFDFGLVTVKGDFATDGKWAFVLVTVKKLTLSSMNLAAQDDP 60
Query: 98 IEQSLETIHYGRSNSFNGLTALELTGT----------------DRVGLLSEVFAVLADLQ 141
S RS S +GL G DRVGLL +V L +
Sbjct: 61 GGGSSPGFPSSRSPSSHGLGDPSSAGVIEPKPGTLYILTVEVEDRVGLLHDVTQELWACE 120
Query: 142 CSVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMT 200
+V A + T +A + Y+ D + P E Q++ I A +R VL+G + M
Sbjct: 121 LTVHRAHISTSPADLAVDMFYITDERNELPNE--QRVAEISANVRAVLRG----KRRSMD 174
Query: 201 VSMAVTHTERRLHQMMFADRDYERMPVLRHST--------------DYPVVTVQNWADRS 246
S A + F + +L HS VTV N ++
Sbjct: 175 ASAAALGNVQISPAPHFVSKTRGGNRLLDHSGTALEKVETASAAHYSEATVTVDNLMSKA 234
Query: 247 YSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
++V ++ +DR LL+DV+ D++ + +A +
Sbjct: 235 HTVFQMRTRDRKGLLYDVLRASKDLKVHISYAKV 268
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 886 DLLGGKIESKARLQTLERRL 905
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 28/178 (15%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 725 RGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFHS 784
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 785 PEQLARIKAAIEDSLSNRHRM----------ITKLEAR--------------PLPRTRAE 820
Query: 234 Y----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 821 AFRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERA 878
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 884 DLLGGKIESKARLQTLERRL 903
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 28/178 (15%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 723 RGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFHS 782
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 783 PEQLARIKAAIEDSLSNRHRM----------ITKLEAR--------------PLPRTRAE 818
Query: 234 Y----PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 819 AFRIEPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERA 876
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 29/194 (14%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDV 78
+ P +++ T + V + + + V L NL + A I S DG + +D
Sbjct: 677 SQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKDG-YVLDT 735
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF------------------------- 113
F V D NG+ + +ES S I+ L ++ G N
Sbjct: 736 FMVLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVDFLPTKS 795
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +E D GLL+ V A ADL ++ AK+ T G A +++ + G + +
Sbjct: 796 NKRTLMEFVALDTPGLLATVGATFADLNINLHGAKI-TTIGERAEDLFILTGSQGGKLSE 854
Query: 174 SQQIDRIEARLRNV 187
++ E ++NV
Sbjct: 855 EEECTLREILIKNV 868
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
GL+ LE+ DR GLL+ + V + + AK+ T R+ L ++ D +PI D
Sbjct: 811 GLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDAQQ-NPITDP 869
Query: 175 QQIDRIEARLRNVL 188
+IEA +R+ L
Sbjct: 870 DLCQQIEAAIRDTL 883
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++V DN V T+V + + R G+L + ++ L +++A IS+D +D F++ D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 84 LNGNKLTDESVISYIEQSL 102
+G K+TD+ V+ I L
Sbjct: 836 KHGKKITDQRVLDNIRGEL 854
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR LLS++ L+ ++ AK++T N I + + SG + + +Q + ++
Sbjct: 682 AKDRPALLSDICGALSSFSYNIKWAKIYTMENDVTIDNIMIANPFSGRKMPEDKQ-ESLK 740
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH--QMMFADRDYERMPVLRHSTDYPVVTV 239
R+ N +K DI+ +T +E + +F +D +
Sbjct: 741 KRIINTIKDGRDIKRQ-------ITQSESSIKGPAQVFIKKDK--------------IVF 779
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
N +Y++V++ KDR LL+D++ + E V A I+T +R
Sbjct: 780 DNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDR 826
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 51/294 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------D 83
T+V V + G+ + + + L + K +S+DGR+ VF + D
Sbjct: 22 PTVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWD 81
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGL 129
L ++L ++ +G +++ A L+L DR+GL
Sbjct: 82 LLKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGL 135
Query: 130 LSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARL 184
L +V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 136 LHDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVL 193
Query: 185 RNVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-- 236
+ L D+ S + + T + QM E P+
Sbjct: 194 GDSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTII 253
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGE 285
VT+ N +++++ +QC D LL+DV+ + D + Y F+A+ N E
Sbjct: 254 SVTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCE 307
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G+L + ++++ D N+ I + Y S +GR +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAVQ 314
Query: 83 DLNGNKLTDE----SVISYIEQSLE------TIHYGRSNSFNGLTALELTGTDRVGLLSE 132
+G K+ D+ ++ + L ++ G +E++G R + +
Sbjct: 315 S-DGKKILDQHRQRALCCRLRMELRRPLHVALVNRGPDTELLVANPVEVSGKGRPLVFYD 373
Query: 133 VFAVLADLQCSVVEAKVWTH 152
+ L +LQ + A++ H
Sbjct: 374 ITLALKNLQRRIFLAEIGRH 393
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 83 DLN-GNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
N G K+ D +++ Y +S E + G
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
+ L + DR GLL E+ V+AD+ V A++ T G IA
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTE-GLIA 243
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 18/169 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T ++L+ DR+G L + L DL V + V T + ++ N+G +ED
Sbjct: 89 TIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFITQSNTGRKVEDPDM 148
Query: 177 IDRIEAR-LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
++RI + N+LK H E Q+ + + PV + D+
Sbjct: 149 LERIRLTIISNLLK----------------YHPESS-EQLAMGEVFGIKAPVKKLDLDFA 191
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
S++ ++ DR LL +++ + D+ V A I+T G
Sbjct: 192 TRIQVKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEG 240
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 201 PKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVS 250
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 23/178 (12%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+ F G T + + D+ + A + L ++ +A++ T + + Y+ G+
Sbjct: 698 QHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGA 757
Query: 170 PI-EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
PI D ++I I L L+ D +++ H R+L F
Sbjct: 758 PIGNDPERIQEIRQGLTEALRNPEDY------LTIIKRHVPRQLKHFAFP---------- 801
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N R +++ V DR LL + + + V +A I T GER
Sbjct: 802 ------PQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGER 853
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T+++V + R G+L Q+ + +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
+ + L+D + + ++Q+L
Sbjct: 862 NADNQPLSDLQLCTQLQQAL 881
>gi|125535803|gb|EAY82291.1| hypothetical protein OsI_37501 [Oryza sativa Indica Group]
Length = 239
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+ G KL
Sbjct: 140 PKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS-YRGAKL 195
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L + L + I A++++ G +D F++T
Sbjct: 822 PNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLT 881
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+ S + IE+ L
Sbjct: 882 DLTGDKIGAASRLKTIERRL 901
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + D GL + ++ ++++A++ T +A ++ G P ++
Sbjct: 721 RGATLVTIYAADHPGLFYRIAGAISVAGGNIIDARIHTTRDGMALDNFLVQDPYGRPFDE 780
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ Q++R++ + + L + M + E FA
Sbjct: 781 APQLERLKQSIEDALANRGKMIDRLMAKPLPRPRAE------AFAI-------------- 820
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LL + +L + A + T GERA
Sbjct: 821 VPNVLIDNKASNRFTVIEVNARDRPALLHQLAYSLFQSRVTIHSAHVATYGERA 874
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 10 LDEYEKLVIRMNTPRVV----------IDNAVCPTATLVKVDSARRHGILLEAVQVLTDL 59
+++Y K VI+ TPR + I T + +++ SA R G+L ++
Sbjct: 795 VEDYSK-VIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSADRPGLLARIARIFISH 853
Query: 60 NLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+L + A IS+ G D+FH+TD L D ++I ++Q++
Sbjct: 854 DLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAI 896
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
N + T +EL TDR GLLS + L + +AK+ T R + YV D N P
Sbjct: 801 NPLSKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQNC-QP 859
Query: 171 IEDSQQIDRIEA 182
I D+Q+ R+ A
Sbjct: 860 IVDAQEQARMSA 871
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LELT
Sbjct: 764 ARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGGSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
V + I L TIH +++ +T LEL+
Sbjct: 764 VRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTILELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 878
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAI 881
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 15 KLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRF 74
++ IR + V IDN T++ V + + G+L E + L DL L + A I +
Sbjct: 810 RMPIRRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQ 869
Query: 75 FMDVFHVTDLNGNKLTDESVISYIEQSLE 103
+DVF+VT+ NG K+ + I+ L+
Sbjct: 870 VVDVFYVTERNGRKVEEARTCESIQARLQ 898
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +++ D+ GLL E+ L DL SV AK+ T ++ + YV + N G +E+++
Sbjct: 830 FTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDVFYVTERN-GRKVEEAR 888
Query: 176 QIDRIEARLRN 186
+ I+ARL+
Sbjct: 889 TCESIQARLQE 899
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L DL +VV+A V+ + + + ++G +ED +
Sbjct: 100 TVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPEL 159
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 160 LEAIRLTIINNLIQYHPESSSQLAMGAA-----------------FGLLPP-KEQVDVDI 201
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
T N +D S+ V+ DR LL D+V ++TD++ V +T G
Sbjct: 202 ATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEG 251
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 40/167 (23%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +++D FH+
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 83 DLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE---------- 120
L G K+ D +++ Y +S E + G F G+ E
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGE---FFGIKPPEKKVDVDVATH 182
Query: 121 --------------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ DR GLL EV ++AD+ V A++ T
Sbjct: 183 VIVEDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEG 229
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE ++++ D+N+ ++ A I ++G D FHV+ G KL
Sbjct: 190 PKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHVS-YRGAKL 245
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
I PRV + A AT+++V + G+L Q L L ++ A++S+ G +D
Sbjct: 760 ITAPPPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVD 819
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL 102
F+VTD G L +E V +E++L
Sbjct: 820 AFYVTDAGGRPLGEEEAARVAKGVEEAL 847
>gi|198283171|ref|YP_002219492.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665343|ref|YP_002425399.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|415964209|ref|ZP_11557954.1| protein-P-II uridylyltransferase [Acidithiobacillus sp. GGI-221]
gi|198247692|gb|ACH83285.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517556|gb|ACK78142.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|339832977|gb|EGQ60855.1| protein-P-II uridylyltransferase [Acidithiobacillus sp. GGI-221]
Length = 862
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ +DN V P TL++V +A G+L + + L L L I A +S+ G D F + +
Sbjct: 777 IRVDNGVLPRYTLLEVRAADHLGLLYQVGETLRALQLNIHGAKVSTFGERVEDTFFILNE 836
Query: 85 NGNKLTDESVISYI 98
G KLT+ V + I
Sbjct: 837 RGRKLTETQVGALI 850
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 25/174 (14%)
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
G DR GL ++ L ++++A++ T +GR V D NS + +Q +
Sbjct: 683 GPDRPGLFQQITGALDRQSLNIIDARIDTSEDGRAIDTFLVID-NSHAFAHSAQAHADLA 741
Query: 182 ARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQN 241
A LR VL+G+ +R + + H + R R + +P + V N
Sbjct: 742 AELRAVLEGEA-VRKPRF----GLRHCDPR-------HRFFAHVPA--------EIRVDN 781
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER---AYLVIN 292
Y+++ V+ D LL+ V TL ++ + A ++T GER + ++N
Sbjct: 782 GVLPRYTLLEVRAADHLGLLYQVGETLRALQLNIHGAKVSTFGERVEDTFFILN 835
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE V+++TD+N+ ++ A I ++G D FHV+ G KL
Sbjct: 198 PKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS-YRGAKL 253
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 40/167 (23%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +S++ FH+
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 83 DLNGNKLTDE------------SVISYIEQSLETIHYGRSNSFNGLTALE---------- 120
+G K+ D +++ Y +S E + G F G+ A E
Sbjct: 135 -RSGRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGE---FFGIKAPEKKVDVDVVTH 190
Query: 121 --------------LTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ DR GLL E+ ++ D+ V A++ T
Sbjct: 191 VIVEDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEG 237
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 110 SNSFN-GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS++ T LE+TG DR GLLS++ ++ L ++ A V T + + YV D +G
Sbjct: 842 SNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TG 900
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ + + + I RL+N G
Sbjct: 901 QKVHNVGRQESIRDRLKNAFDG 922
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V++ N+ T+++V R G+L + ++ LNL I A++ + G +DVF+VTDL
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
G K+ + I L+ N+F+G
Sbjct: 899 TGQKVHNVGRQESIRDRLK-------NAFDG 922
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L DL +VV+A V+ + + + ++G +ED +
Sbjct: 100 TVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPEL 159
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 160 LEAIRLTIINNLIQYHPESSSQLAMGAA-----------------FGLLPP-KEQVDVDI 201
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
T N +D S+ V+ DR LL D+V ++TD++ V +T G
Sbjct: 202 ATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEG 251
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
N Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYG 887
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ + + +E+ L
Sbjct: 886 DLLGGKIESRARLQTLERRL 905
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 28/178 (15%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
G T + + TD GL + + ++++A++ T +A ++ G
Sbjct: 725 RGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPFGGAFHS 784
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+Q+ RI+A + + L + + +T E R P+ R +
Sbjct: 785 PEQLGRIKAAIEDSLSNRHRL----------ITKLEAR--------------PLPRTRAE 820
Query: 234 ----YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 821 AFQIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERA 878
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 110 SNSFN-GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
SNS++ T LE+TG DR GLLS++ ++ L ++ A V T + + YV D +G
Sbjct: 842 SNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL-TG 900
Query: 169 SPIEDSQQIDRIEARLRNVLKG 190
+ + + + I RL+N G
Sbjct: 901 QKVHNVGRQESIRDRLKNAFDG 922
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V++ N+ T+++V R G+L + ++ LNL I A++ + G +DVF+VTDL
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNSFNG 115
G K+ + I L+ N+F+G
Sbjct: 899 TGQKVHNVGRQESIRDRLK-------NAFDG 922
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
N Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYG 887
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|238007756|gb|ACR34913.1| unknown [Zea mays]
gi|414589017|tpg|DAA39588.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 428
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 51/294 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------D 83
T+V V + G+ + + + L + K +S+DGR+ VF + D
Sbjct: 22 PTVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWD 81
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGL 129
L ++L ++ +G +++ A L+L DR+GL
Sbjct: 82 LLKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGL 135
Query: 130 LSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARL 184
L +V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 136 LHDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVL 193
Query: 185 RNVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-- 236
+ L D+ S + + T + QM E P+
Sbjct: 194 GDSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTII 253
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGE 285
VT+ N +++++ +QC D LL+DV+ + D + Y F+A+ N E
Sbjct: 254 SVTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCE 307
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G+L + ++++ D N+ I + Y S +GR +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAVQ 314
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 315 S-DGKKILDQ 323
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
N Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYG 887
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 38/201 (18%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D R++
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDPLLCTRLQD 879
Query: 183 RLRNVLKGDN--DIRSAKMTV 201
+ L N DI+ +++++
Sbjct: 880 AIVEQLTVSNEPDIKLSRISI 900
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + + ++ ++
Sbjct: 861 TDANNQPLSDPLLCTRLQDAI 881
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F++T
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G K+ ++ + +E+ L
Sbjct: 886 DLIGGKIESKARLQTLERRL 905
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V + N A ++V+ V +DR LLF + L + V A + T GERA
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERA 878
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
I PRV + A AT+++V + G+L Q L L ++ A++S+ G +D
Sbjct: 761 ITAPPPRVRVAPAASHHATVIEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVD 820
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL 102
F+VTD G L +E V +E++L
Sbjct: 821 AFYVTDAGGRPLGEEEAARVAKGVEEAL 848
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 30/177 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++A
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCLRLQA 879
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 TRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A+V T + + Y V D + S
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPTRVKQIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D + GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQD-SEGSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQ 240
+ LKG+ R A DRD +R R T +
Sbjct: 806 MIDKTLKGEVVAREA-------------------LKDRDKLKKREAQFRFPTH---IAFD 843
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
N Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 844 NEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYG 887
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKNRQETLEKKL 917
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
I I L TIH +++ +T LELT
Sbjct: 764 ARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDP 871
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 861 TDANNHPLSDPLLCSRLQDAI 881
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 35/165 (21%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LELT
Sbjct: 764 ARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
DR GLL+ + + + S+ AK+ T R+ + ++ D N+
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANN 865
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L +K A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N ++L+D + S ++ ++
Sbjct: 861 TDANNHQLSDPLLCSRLQDAI 881
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 28/197 (14%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLV 290
P VT+ N A R +V+ + DR LL + + + + +A I T GER V
Sbjct: 802 ----PQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDV 857
Query: 291 I-----NCYQFDSNYCC 302
N +Q C
Sbjct: 858 FFITDANNHQLSDPLLC 874
>gi|413917417|gb|AFW57349.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917418|gb|AFW57350.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 210
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
N RVV+DN T+V+V S G L Q L D + I +A+I+++ +DVF+
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 81 VTDLNGNKLTDESVI 95
V D K+ + + I
Sbjct: 824 VLDSQQEKIVEPAFI 838
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+L+ + L+ + +VV+A+ +T +G ++ +V+D GSP E ++ + R+
Sbjct: 733 DHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQD-REGSPYEKAR-LPRLTTM 790
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWA 243
+R L G+ + S M + ER + +P +T N
Sbjct: 791 IRKTLMGEV-VASEAMEKRDKIKKRERPFN-----------VPT--------TITFDNEG 830
Query: 244 DRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
Y+++ V +DR LL+D+ L + ATI T G
Sbjct: 831 SEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYG 871
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTPRVV-IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 809 DKIKKRERPFNVPTTITFDNEGSEIYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIA 868
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D G KL E + +E+ L
Sbjct: 869 TYGVQVVDTFYVKDTFGLKLHSEPRRAALERKL 901
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 47/173 (27%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN P AT+V V+ R G LL+ + L L L I++A + SD F+VT
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREHK---FYVT 102
Query: 83 DLNGN-------KLTD------ESVISYIEQSLETIHYGRSNSFNGL------------- 116
D+ + KL + ++++ + +S E + +G + +
Sbjct: 103 DMRTSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGA 162
Query: 117 -----TALEL----TGT---------DRVGLLSEVFAVLADLQCSVVEAKVWT 151
T +E+ TGT DR GLL+++ VL D+ +VV A+V T
Sbjct: 163 KRGISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDT 215
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 33 PTAT--LVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT 90
PT T ++ V++ R G+L + V+VL D+NL + A + + GR MD F++T +G L+
Sbjct: 176 PTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFNIT-YHGEPLS 234
Query: 91 D 91
D
Sbjct: 235 D 235
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID P AT+V++ R G L++ ++ L DL L + K +S++G F +T
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 83 DLN-GNKLTDESVISYIEQSL------------ETIHYGRSNSFNGL------------- 116
+ G K+ D ++ I ++ E + G +
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L + DR GL+ E+ V+AD+ V A++ T
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEG 259
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+++E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 220 PKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEGLVAKDKFHVS 269
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N +L+D + S ++ ++
Sbjct: 862 DANNQQLSDPQLCSRLQDAI 881
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ Q++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GNNPQRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL+ DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 805 TIH---NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 164 DCNSGSPIEDSQQIDRIE 181
D N+ + D Q R++
Sbjct: 862 DANNQQ-LSDPQLCSRLQ 878
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
DN + T ++V++ R G+L + L +L L I A I ++ +D F+V +L+G
Sbjct: 843 FDNETSESRTAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYVNELDG 902
Query: 87 NKLTDESVISYIEQSL 102
+K+ D S++E+ +
Sbjct: 903 SKILDPGRQSFVERKI 918
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 37/162 (22%)
Query: 59 LNLLIKKAYISSDGRFFMDVFHVTD----------------------LNGNKLTDESVIS 96
LN+L + + SD +D F+VTD L G+++ ++I+
Sbjct: 762 LNILTAQVFTRSDA-IVLDTFYVTDARTGALANREEKEKLEELLNKVLTGDEVNFRALIA 820
Query: 97 Y------IEQSLE------TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+ QS E +H+ S TA+E+ DR+GLL + LA+L+ ++
Sbjct: 821 KQRVNRPLYQSYEGDQMPTQLHFDNETS-ESRTAIEVETEDRIGLLYAISEALAELELNI 879
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRN 186
AK+ T G YV + + GS I D + +E ++R+
Sbjct: 880 SAAKIVTEKGAAIDTFYVNELD-GSKILDPGRQSFVERKIRD 920
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 95 ISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNG 154
IS E +L+ + + G T ++ DR GL S + + +++ A+V+T +
Sbjct: 715 ISEHENALQPVVDWHNEPDRGYTVAKICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSD 774
Query: 155 RIA-SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
I YV D +G+ + + ++ +++E L VL GD V+ ++R++
Sbjct: 775 AIVLDTFYVTDARTGA-LANREEKEKLEELLNKVLTGDE--------VNFRALIAKQRVN 825
Query: 214 QMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEY 273
+ ++ + ++MP H N S + + V+ +DR LL+ + L ++E
Sbjct: 826 RPLYQSYEGDQMPTQLH--------FDNETSESRTAIEVETEDRIGLLYAISEALAELEL 877
Query: 274 VVFHATINT 282
+ A I T
Sbjct: 878 NISAAKIVT 886
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G ++ +++D GSP E S+ + R+ +
Sbjct: 748 ADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDAE-GSPYEISR-LPRLTS 805
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+ LKG+ R A RD +++ +P + N
Sbjct: 806 MIDKTLKGEVVAREAL---------------------RDRDKVKKRESQFRFPTHIAFDN 844
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
Y+++ V +DR LL+D+ TL + A I T G
Sbjct: 845 EGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYG 887
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 840 IAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDM 899
Query: 85 NGNKLTDESVISYIEQSL 102
G KL ++ +E+ L
Sbjct: 900 FGLKLHQKTRQETLEKKL 917
>gi|303248455|ref|ZP_07334714.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
gi|302490166|gb|EFL50085.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio fructosovorans
JJ]
Length = 886
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+T DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +Q
Sbjct: 808 TVLEVTCDDRVGLLYDIAHTLYELRLETHLAKVVTPAGRVRDVFYVRGPD-GRRVEDPEQ 866
Query: 177 IDRIEARLRNVLKGD 191
I+A L + L D
Sbjct: 867 AAEIKAALLHRLADD 881
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
V + I + L TIH +++ +T LEL
Sbjct: 764 VRVQEIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADN-HPLSDPQLCSRLQ 878
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + + L+D + S +++++
Sbjct: 861 TDADNHPLSDPQLCSRLQEAI 881
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 759
Query: 172 EDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPVRVQEIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
>gi|449484539|ref|XP_004156910.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase 1-like
[Cucumis sativus]
Length = 954
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + +DN+ +T + + R G+L +V L L I KA + +G +F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 83 DLNGNKLTDESVISYIEQSL 102
D +GNK+ + I I+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|449457765|ref|XP_004146618.1| PREDICTED: glycogen phosphorylase 1-like [Cucumis sativus]
Length = 954
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P + +DN+ +T + + R G+L +V L L I KA + +G +F F V+
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 83 DLNGNKLTDESVISYIEQSL 102
D +GNK+ + I I+++L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V + G+L + L D ++ ++ A++S+ G +D F+V
Sbjct: 730 PPRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYV 789
Query: 82 TDLNGNKLTDESVISYIEQSLETIH 106
T G L E S + ET+
Sbjct: 790 TGPEGAPLPSEEAASVARKLEETLR 814
>gi|413950197|gb|AFW82846.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 543
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 25/269 (9%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRNVLKGD-NDIRSAK 198
+ KV T +GR+ L ++ D ++ Q+ + A L + + +
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITDGMELLHRKERQEETCSALTATLGPSISCEVVPAEGFQ 281
Query: 199 MTVSMAVTHTERRLHQMMFADRDYE--RMPV---LRHSTDYPVVTVQNWADRSYSVVNVQ 253
S L + AD D E P+ LR V N ++++V +
Sbjct: 282 QGFSSLPPEIAEELFRAELADTDSEVCSSPLSAELRKVRTTATVNFDNSLSPAHTLVQIV 341
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINT 282
C D+ L++D++ T+ D +F+ +
Sbjct: 342 CADQKGLIYDILRTMKDCNIQIFYGRFRS 370
>gi|103488264|ref|YP_617825.1| PII uridylyl-transferase [Sphingopyxis alaskensis RB2256]
gi|98978341|gb|ABF54492.1| UTP-GlnB uridylyltransferase, GlnD [Sphingopyxis alaskensis RB2256]
Length = 935
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN T+++V++ R +L + L + + A++++ G +D F+VT
Sbjct: 842 PNVFVDNKASNRFTVIEVNAQDRPALLNQLAYALFQSKVTVHSAHVATYGERAVDTFYVT 901
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+ + + +E+ L
Sbjct: 902 DLIGDKIDSPARVKTLEKRL 921
>gi|357151073|ref|XP_003575673.1| PREDICTED: uncharacterized protein LOC100845516 [Brachypodium
distachyon]
Length = 496
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+N RVVIDN AT+++V+ R +L A+ + LLI + + R +
Sbjct: 13 LNRLRVVIDNDASDRATVIRVEILSRLWVLTCAIN---EHGLLIHDSDLHYHSRLWHGAI 69
Query: 80 HVTDLNGNKLTDESVISYIEQSLETI---HYGRSNSF 113
VTD +GNK+ DE I+ I ++E + H R N+
Sbjct: 70 SVTDDDGNKIADERTITDIRTAIEDMERQHLTRMNAL 106
>gi|302558147|ref|ZP_07310489.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
gi|302475765|gb|EFL38858.1| protein-P-II uridylyltransferase [Streptomyces griseoflavus Tu4000]
Length = 823
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V + G+L + L D + ++ A++S+ G +D F+V
Sbjct: 738 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 797
Query: 82 TDLNGNKLTDESVISYIEQSLETIH 106
T G L E ++ + ET+
Sbjct: 798 TQEQGVPLPGEEAVAVARKLEETLR 822
>gi|386393406|ref|ZP_10078187.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
gi|385734284|gb|EIG54482.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
Length = 881
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +E+ DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +
Sbjct: 802 FTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGAD-GRRVEDPE 860
Query: 176 QIDRIEARLRNVLKGD 191
Q + I+A L + L D
Sbjct: 861 QAEEIKAALLHRLADD 876
>gi|224028845|gb|ACN33498.1| unknown [Zea mays]
gi|413950198|gb|AFW82847.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 516
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 25/269 (9%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARLRNVLKGD-NDIRSAK 198
+ KV T +GR+ L ++ D ++ Q+ + A L + + +
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITDGMELLHRKERQEETCSALTATLGPSISCEVVPAEGFQ 281
Query: 199 MTVSMAVTHTERRLHQMMFADRDYE--RMPV---LRHSTDYPVVTVQNWADRSYSVVNVQ 253
S L + AD D E P+ LR V N ++++V +
Sbjct: 282 QGFSSLPPEIAEELFRAELADTDSEVCSSPLSAELRKVRTTATVNFDNSLSPAHTLVQIV 341
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINT 282
C D+ L++D++ T+ D +F+ +
Sbjct: 342 CADQKGLIYDILRTMKDCNIQIFYGRFRS 370
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +Q ++ +A+ +T +G + +V+D G P E + ++ R+
Sbjct: 760 DHPGIFSRMCGALALVQANIKDARTFTSKDGYACAAFWVQD-QDGHPYE-TDRLPRLRDM 817
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQN 241
+ LKG+ + A F DRD +R + T +T N
Sbjct: 818 IGKTLKGEVVAKEA-------------------FRDRDKLKKREAAFKVPTS---ITFDN 855
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + A I T GE+
Sbjct: 856 DGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQ 900
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 851 ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDM 910
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E L
Sbjct: 911 FGLKFRSESRRRALEAKL 928
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
V + I + L + H+ +++ +T LEL+ D
Sbjct: 764 VRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPVRVKKIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + ++ ++
Sbjct: 861 TDADNQPLSDPELCRRLQDAI 881
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 55/191 (28%)
Query: 8 ACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY 67
+ DE +++V P+V+IDN P AT+++++ + G L + + + +L L I +A
Sbjct: 25 SATDEAKQVV-----PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAE 79
Query: 68 ISSDGRFFMDVFHVTD-LNGNKLTDESVISYIEQSLETI---HYGRSNSFNGLTA----- 118
I+ + + F+VTD + K+T + + + Q++ T ++ + F TA
Sbjct: 80 ITESNQ---NRFYVTDHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKP 136
Query: 119 --------------------------------------LELTGTDRVGLLSEVFAVLADL 140
L + TDR GLLSE+ VL DL
Sbjct: 137 YEVADDAETEYVTPTKKKRQIVPTRITVTSVSNGTKSKLLIETTDRPGLLSEIVRVLKDL 196
Query: 141 QCSVVEAKVWT 151
+VV+A++ T
Sbjct: 197 NLNVVQAEIDT 207
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAY-ISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 581 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 640
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LEL+
Sbjct: 641 ARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIH---NDAQRQVTVLELS 697
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 698 APDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDPQLCSRLQ 755
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 678 APLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 737
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 738 TDAHNQPLSDPQLCSRLQEAI 758
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 577 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 636
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 637 GDN------PARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFA------------ 678
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P+VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 679 ----PLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGER 730
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R I N + T+++V S R G L ++L + N+ + A I++ G D+F +TD
Sbjct: 810 RTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD 869
Query: 84 LNGNKLTDESVISYIEQSL 102
+GN L+D ++ ++ ++
Sbjct: 870 ADGNPLSDPALCEQLQHAI 888
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
++ N T +ELT DR GLL+ V + + ++ AK+ T R+ + ++ D +G
Sbjct: 812 QDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAGE 870
Query: 170 PIEDSQQIDRIEARL 184
P+ D ++ R+ RL
Sbjct: 871 PLTDPERQARLRERL 885
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RVVI+ T+V++ + R G+L ++ + ++ + A I++ G DVF +TD
Sbjct: 807 RVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD 866
Query: 84 LNGNKLTDESVISYIEQSL 102
G LTD + + + L
Sbjct: 867 KAGEPLTDPERQARLRERL 885
>gi|294085165|ref|YP_003551925.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664740|gb|ADE39841.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 972
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV++ N + T ++++V+ G L + + + L L I+ + IS+ G +DVF+V
Sbjct: 872 PRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQSSSISTYGERVVDVFYVK 931
Query: 83 DLNGNKLTDESVISYIEQSL 102
D+ G ++ +E +I +L
Sbjct: 932 DIFGLQILNERRQQHIRNAL 951
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|196228226|ref|ZP_03127093.1| UTP-GlnB uridylyltransferase, GlnD [Chthoniobacter flavus Ellin428]
gi|196227629|gb|EDY22132.1| UTP-GlnB uridylyltransferase, GlnD [Chthoniobacter flavus Ellin428]
Length = 934
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+VIDN P TLV + + R G+L ++ + + N+ I + I+++ +D F+VTD
Sbjct: 846 RIVIDNDAHPVYTLVDIQTPDRLGLLYRLLRAIAETNVQIALSRIATEKGAAIDTFYVTD 905
Query: 84 LNGNKLTDESVISYIEQSLE 103
+ G KL + I+ ++++L+
Sbjct: 906 VEGRKLRSATAIAKLQKALQ 925
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I + L + H+ +++ +T LELT D
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D + G P+ D + R++
Sbjct: 824 RPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPELCARLQ 878
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD G L+D + + +++++
Sbjct: 861 TDDKGQPLSDPELCARLQETI 881
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV-KDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + YV D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ +I +I L LK +D T +RR+ + L+H
Sbjct: 760 GNNPARIQQIREGLIEALKNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGER 853
>gi|357635440|ref|ZP_09133318.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
gi|357583994|gb|EHJ49327.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
Length = 905
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T +E+ DRVGLL ++ L +L+ AKV T GR+ + YV+ + G +ED +
Sbjct: 826 FTVIEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGAD-GRRVEDPE 884
Query: 176 QIDRIEARLRNVLKGD 191
Q + I+A L + L D
Sbjct: 885 QAEEIKAALLHRLADD 900
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGNNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
I I + L + H+ +++ +T LELT D
Sbjct: 764 ARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D + G P+ D + R++
Sbjct: 824 RPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKGQPLSDPEFCARLQ 878
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD G L+D + +++++
Sbjct: 861 TDDKGQPLSDPEFCARLQEAI 881
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYV-KDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + YV D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ +I +I L LK +D T +RR+ + L+H
Sbjct: 760 GNNPARIQQIREGLIEALKNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGER 853
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + S+ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
D +G L + A L L ++V A+V + Y+ D + I S+ ++ I
Sbjct: 74 DVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKTLELI---- 129
Query: 185 RNVLKGDNDIRSAKMTV--SMAVTHTE------RRLHQMMFADRDYERMPV---LRHSTD 233
+MT+ +M H E H M DRD + P+ + +
Sbjct: 130 -------------RMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVAPAVK 176
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAY-LVIN 292
VV V N + S + + DR LL D+V TL D+ V A I+T G +AY +V
Sbjct: 177 TSVV-VDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYV 235
Query: 293 CYQ 295
YQ
Sbjct: 236 TYQ 238
>gi|255575072|ref|XP_002528441.1| amino acid binding protein, putative [Ricinus communis]
gi|223532117|gb|EEF33924.1| amino acid binding protein, putative [Ricinus communis]
Length = 420
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 23/269 (8%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF----HVTDLNGNKLT 90
T+V V+ + G+ + +++ + L I +A S+DGR+ VF H T N +
Sbjct: 21 PTVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVPHSTSHKVNWDS 80
Query: 91 DESVISYIEQSLETIHY--GRSN--SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++ +S Y +SN S L L+ DR GLL +V +L +L+ ++
Sbjct: 81 LKNRLSCASPPCLGPFYFDQKSNVTSVPSLYLLKFCFVDRKGLLHDVAKILTELEFTIQR 140
Query: 147 AKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR-LRNVLK----------GDNDI 194
KV T +G++ L ++ D G + +++ R L +V K +
Sbjct: 141 VKVMTTPDGKVVDLFFITD---GLDLLHTEKRRSDTCRHLASVFKECCISCELQLAGPEY 197
Query: 195 RSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQC 254
S + S+ + E ++ + D VTV N +++++ ++C
Sbjct: 198 ESLQAFSSLPLPIAEELFSCEQLEEKTCSQALCTDTIADKATVTVDNNMSPAHTLLQLKC 257
Query: 255 KDRTKLLFDVVCTLTDMEYVVFHATINTA 283
D+ L +D++ T D V + +++
Sbjct: 258 IDQKGLFYDILRTSKDCNIRVAYGRFSSS 286
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 36/190 (18%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGDSIGDNP 762
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
V + I L TIH +++ +T LEL+
Sbjct: 763 VRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQVTIH---NDAQRPVTILELS 819
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 820 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADN-LPLSDPQLCSRLQD 878
Query: 183 RLRNVLKGDN 192
+ L+ D
Sbjct: 879 AIVEQLRVDQ 888
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGDSI 758
Query: 172 EDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ +I L + L+ +D T +RR+ + L+H
Sbjct: 759 GDNPVRVKQIRDGLTDALRNPDDY----------PTIIQRRVPRQ------------LKH 796
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
T P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 797 FTFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 860 TDADNLPLSDPQLCSRLQDAI 880
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LEL+
Sbjct: 764 ARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDPQLCSRLQ 878
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 861 TDAHNQPLSDPQLCSRLQEAI 881
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ + LA + +VV+A+ +T +G + + +++D + +P D ++ R+
Sbjct: 740 DHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQDSDD-TPY-DEDRLPRLRKM 797
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQNW 242
+ L GD R A DRD ++ + P +T N
Sbjct: 798 IERTLAGDILPRDA-------------------LTDRD--KIKKRERAFKVPTHITFDND 836
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LLFD+ +L + +A I T GE+
Sbjct: 837 GSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQ 880
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 831 ITFDNDGSEIYTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDM 890
Query: 85 NGNKLTDESVISYIEQSL 102
G K ES +E+ L
Sbjct: 891 FGLKFYSESKQKTLERKL 908
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + +
Sbjct: 127 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGNNP 186
Query: 92 ESVISYIEQSLETIHYG--------------------------RSNSFNGLTALELTGTD 125
E + E E +H +++ +T LEL D
Sbjct: 187 ERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPD 246
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ V + + S+ AK+ T R+ + ++ D N+ P+ D Q R++
Sbjct: 247 RPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDPQLCSRLQ 301
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 225 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 284
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + S +++++
Sbjct: 285 DANNQPLSDPQLCSRLQEAI 304
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-QPLSDPQ 871
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LEL+
Sbjct: 764 ARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 821 APDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDPQLCSRLQ 878
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S +++++
Sbjct: 861 TDAHNQPLSDPQLCSRLQEAI 881
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + +SG +ED +
Sbjct: 96 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 155
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N + + SA++ + A + Q+ D E + S D P
Sbjct: 156 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPK-EQV-----DVEIATQITISDDGP- 208
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
S++ V+ DR LL D+V T+TD+ V +T G
Sbjct: 209 ---------KRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEG 247
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV +DN T+V+V + + G+L + L L I A I++ +DVF+V D
Sbjct: 783 RVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRD 842
Query: 84 LNGNKLTDESVISYIEQS-LETIHYGRSNSFNGLTALELTG 123
+G K+ + I+Q+ LET+H R+N L TG
Sbjct: 843 FDGQKVDSPESVDAIKQTVLETLHGERNNKGVKPAGLGETG 883
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 80 HVTD-LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
H TD N L+D+ +E ET S F L +E+ DR GL++++ AVL
Sbjct: 682 HRTDCPNAINLSDKDRTIEVEWEQET-----SGMF--LVTIEVIAYDRTGLMADILAVLM 734
Query: 139 DLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNV 187
+L+ SV A V N +A + N G I+D QQ++ I ++R +
Sbjct: 735 ELKLSVSTANVKVENTGMAGM------NLGIQIKDLQQLEFIMTKIRRI 777
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 922
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + ++ ++
Sbjct: 861 TDADNQPLSDPELCRRLQDAI 881
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQC 142
D G K E VI IE ++ R G++ LEL DRVGLLSEV +L +
Sbjct: 7 DTQGEK---ERVIQRIEAAI------RRRVSEGVS-LELCAKDRVGLLSEVTRILRENGL 56
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
+V A V T + ++ YV+D SG+P++
Sbjct: 57 TVCRAGVSTRGEQALNVFYVRDA-SGNPVD 85
>gi|356547236|ref|XP_003542022.1| PREDICTED: uncharacterized protein LOC100785121 [Glycine max]
Length = 356
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--M 76
++ V IDN + P TLV++ A G L + ++ L D+N+ I S + + +
Sbjct: 170 KLKKANVAIDNYLSPAHTLVQIRCADHKGRLYDIMRTLKDMNMKISYGRFSPNSMGYRDL 229
Query: 77 DVFHVTDLNGNKLTDE----SVISYIEQ----SLETIHYGRSNSFNGLTA--LELTGTDR 126
D+F + +G K+ D ++ S+++Q L I R L A +EL+G R
Sbjct: 230 DIF-IQQNDGKKILDREKQSALCSHLKQEMLHPLRVIIANRGPDTELLVANPVELSGIGR 288
Query: 127 VGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ +V L L V A+V H+
Sbjct: 289 PRVFYDVTFALKTLGICVFSAEVGRHS 315
>gi|413917416|gb|AFW57348.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 165
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V + G+L + L D +L ++ A++S+ G +D F+V
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 82 TDLNGNKLTDESVISYIEQSLETI 105
T +G L + S + ET+
Sbjct: 791 TGTDGAPLPGDEAASVARKLEETL 814
>gi|414589019|tpg|DAA39590.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 295
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 47/270 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-----------D 83
T+V V + G+ + + + L + K +S+DGR+ VF + D
Sbjct: 22 PTVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWD 81
Query: 84 LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTA--------------LELTGTDRVGL 129
L ++L ++ +G +++ A L+L DR+GL
Sbjct: 82 LLKDRLLQLCPVA------PPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGL 135
Query: 130 LSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARL 184
L +V VL +L+ ++ KV T +G + L ++ D ++ S E++Q DR+E+ L
Sbjct: 136 LHDVTRVLCELELTIRRVKVSTTPDGSVLDLFFITDARGLLHTKSRREETQ--DRLESVL 193
Query: 185 RNVL------KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-- 236
+ L D+ S + + T + QM E P+
Sbjct: 194 GDSLTCCEIDPAGEDMVSCCLQSWAWASLTPAVIAQMFSTADRVEEQPIGTRGGGGGTII 253
Query: 237 -VTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
VT+ N +++++ +QC D LL+DV+
Sbjct: 254 SVTMDNSLSPAHTLIQIQCGDHKGLLYDVM 283
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 828 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 887
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 888 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 922
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
L +E+ DR GL++++ A L +++ SV +A V N +A + + G I+D Q
Sbjct: 720 LVTIEVISYDRTGLMADILAALTEMKLSVSKANVKVENNGMAVM------HLGIQIKDLQ 773
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQM 215
Q+D I ++R + KG H+ RR+H M
Sbjct: 774 QLDYIMTKIRRI-KG---------------VHSVRRMHSM 797
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 837 DKIKKRERAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIA 896
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLET 104
+ G +D F+V D+ G K E+ +E L +
Sbjct: 897 TYGEQVVDAFYVKDMFGLKYYSEAKQKSLEAKLRS 931
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 160 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 219
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 220 ARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 279
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D +
Sbjct: 280 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPE 328
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 157 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIG 216
Query: 173 DSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 217 DN------PARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFA------------- 257
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 258 ---PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 309
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +T
Sbjct: 258 PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFIT 317
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + +++++
Sbjct: 318 DADNQPLSDPELCLRLQEAI 337
>gi|336123498|ref|YP_004565546.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
gi|335341221|gb|AEH32504.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
Length = 874
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 29/194 (14%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDV 78
+ P +++ T + V + + + V L NL + A I S DG + +D
Sbjct: 677 SQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKDG-YVLDT 735
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSF------------------------- 113
F V D NG+ + +E S I+ L + G N
Sbjct: 736 FMVLDQNGHAIDEECHPSLIKHLLSGLETGWQNKLKLRRTPRNLQHFKVKTKVDFLPTKS 795
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T +EL D GLL+ V A ADL ++ AK+ T G A +++ + G + +
Sbjct: 796 NKRTLMELVALDTPGLLATVGATFADLNINLHGAKI-TTIGERAEDLFILTGSQGGKLSE 854
Query: 174 SQQIDRIEARLRNV 187
++ E ++NV
Sbjct: 855 EEECTLREMLIKNV 868
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K V+ + T R+VI++ P +++ +++A R G+LLE ++++ D N+ ++ A I ++G
Sbjct: 175 KKAVVDIAT-RIVIEDD-GPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGL 232
Query: 74 FFMDVFHVTDLNGNKL 89
D FHV+ G KL
Sbjct: 233 VAKDKFHVS-YRGAKL 247
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSRLQEAI 880
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + +
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGNNP 762
Query: 92 ESVISYIEQSLETIHYG--------------------------RSNSFNGLTALELTGTD 125
E + E E +H +++ +T LEL D
Sbjct: 763 ERIQDIREGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPD 822
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ V + + S+ AK+ T R+ + ++ D N+ P+ D Q R++
Sbjct: 823 RPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDPQLCSRLQ 877
>gi|21536685|gb|AAM61017.1| unknown [Arabidopsis thaliana]
Length = 410
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + ++ + + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTDTRE--LLGTVKRRNEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT--HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
+T T + + +F+ H++ + V N +++++++ C+D L
Sbjct: 197 PEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGL 256
Query: 261 LFDVVCTLTDM 271
L+D++ T D
Sbjct: 257 LYDIMRTFKDF 267
>gi|238009308|gb|ACR35689.1| unknown [Zea mays]
Length = 155
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 11 DEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARR 45
DEY+K + MN PRV IDN CP+A ++ RR
Sbjct: 25 DEYQKFIQNMNPPRVTIDNTSCPSAIVIHESVHRR 59
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGDNP 763
Query: 94 -----------------------VISYIEQSLE--------TIHYGRSNSFNGLTALELT 122
+ + + L+ TIH +++ +T LELT
Sbjct: 764 ARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDP 871
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 861 TDANNHPLSDPLLCSRLQDAI 881
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 20 MNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
N P + DN T+++VD+ R G+L + + L++ N+ I A I++ G +D
Sbjct: 818 FNVPTSIAFDNEGSEIYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDT 877
Query: 79 FHVTDLNGNKLTDESVISYIEQSL 102
F+V D+ G K S +E+ L
Sbjct: 878 FYVKDMFGLKFYTPSKQKTLERRL 901
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + A AT+++V + G+L + L D +L ++ A++S+ G +D F+VT
Sbjct: 732 PRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVT 791
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
+G L + S + ET+
Sbjct: 792 GTDGAPLPGDEAASVARKLEETL 814
>gi|18404252|ref|NP_030235.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|4883601|gb|AAD31570.1| expressed protein [Arabidopsis thaliana]
gi|20260622|gb|AAM13209.1| unknown protein [Arabidopsis thaliana]
gi|23197994|gb|AAN15524.1| unknown protein [Arabidopsis thaliana]
gi|330254211|gb|AEC09305.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949476|gb|AEP31951.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 410
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT-------DLNGN 87
+++ ++ + G+ + ++L L I + +S+DG++ VF V +L
Sbjct: 20 PSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKM 79
Query: 88 KLTDESVISYIEQSLETIHYGRSNS----FNGLTALELTGTDRVGLLSEVFAVLADLQCS 143
+L + S + + S S L L+L +DR GLL +V VL L+ +
Sbjct: 80 RLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEIN 139
Query: 144 VVEAKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVS 202
+ + K+ T +G++ L +V D + ++ + + LR+ + GD+ I V
Sbjct: 140 IEKVKISTTPDGKVMDLFFVTDTRE--LLGTVKRRNEVYEYLRDAI-GDSMISYDIELVG 196
Query: 203 MAVT--HTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKL 260
+T T + + +F+ H++ + V N +++++++ C+D L
Sbjct: 197 PEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGL 256
Query: 261 LFDVVCTLTDM 271
L+D++ T D
Sbjct: 257 LYDIMRTFKDF 267
>gi|345849786|ref|ZP_08802793.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
gi|345638767|gb|EGX60267.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
Length = 815
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V + G+L + L D + ++ A+ + G +D F+V
Sbjct: 730 PPRVSVHPAASRQATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYV 789
Query: 82 TDLNGNKLTDESVISYIEQSLETIH 106
T G L E +S + ET+
Sbjct: 790 TGPEGAPLPGEEAVSVARKLEETLR 814
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSLLQEAI 880
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-QPLSDPQ 871
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSLLQEAI 880
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-QPLSDPQ 871
>gi|223973865|gb|ACN31120.1| unknown [Zea mays]
gi|413916120|gb|AFW56052.1| hypothetical protein ZEAMMB73_227344 [Zea mays]
Length = 135
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ I + T VV D+ P +++ +++A R G+LLE ++++ D N+ ++ A I ++G
Sbjct: 37 KKVDIDIATHIVVEDDG--PKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGL 94
Query: 74 FFMDVFHVTDLNGNKLTDES 93
D FHV+ G KL S
Sbjct: 95 VAKDKFHVS-YRGAKLNSSS 113
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 690 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 749
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 750 TDANNQPLSDPQLCSQLQEAI 770
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 694 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 750
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 751 DANN-QPLSDPQ 761
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LEL+
Sbjct: 764 ARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANN-QPLSDP 871
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S ++ ++
Sbjct: 861 TDANNQPLSDPLLCSRLQDAI 881
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
>gi|392408543|ref|YP_006445150.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
gi|390621679|gb|AFM22886.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
Length = 889
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
+V +DNA +T+++V + R G+L + + LT L L I I+++ D+F+V D
Sbjct: 791 KVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQD 850
Query: 84 LNGNKLTDESVISYIEQSLE 103
GNK+ D + I SL+
Sbjct: 851 EFGNKIMDFDRMEEIRSSLK 870
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-QPLSDPQ 871
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P+ L E K + RV IDN V T++ + + + G+L LT L L I +
Sbjct: 796 PSILTEKAKPTV---PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVS 852
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
IS+ DVF+V D+ G K+++ + + I + L
Sbjct: 853 KISTKVDQVADVFYVKDIFGQKISEPAKLEEIRKEL 888
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N L+D + S +++++
Sbjct: 860 TDANNQPLSDPQLCSQLQEAI 880
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-QPLSDPQ 871
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 26/186 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ G+PI
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGTPI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+++ R+ + +G D +R+ +++ H R+L F
Sbjct: 760 GDNRE------RIEEIRQGLIDAVRNPDEYLTIIQRHVPRQLKHFAFP------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER---A 287
P VT+ N R +++ + DR LL V + V +A I T GER
Sbjct: 802 ----PQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDV 857
Query: 288 YLVINC 293
+ V N
Sbjct: 858 FFVTNA 863
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L Q+ +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESV 94
+ + L+D +
Sbjct: 862 NADNQPLSDPQL 873
>gi|374623042|ref|ZP_09695559.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
gi|373942160|gb|EHQ52705.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
Length = 898
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T L ++ DR GLLS + VL D V AK+ T + + YV + N PI+D ++
Sbjct: 818 TVLSISTADRPGLLSRIGIVLMDCGVKVYNAKIATAGEQADDVFYVTELND-QPIQDPER 876
Query: 177 IDRIEARLRNVLK 189
I RLR L+
Sbjct: 877 RQLITDRLREALQ 889
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ I + T VV D+ P +++ +++A R G+LLE ++++ D N+ ++ A I ++G
Sbjct: 175 KKVDIDIATHIVVEDDG--PKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGL 232
Query: 74 FFMDVFHVTDLNGNKLTDES 93
D FHV+ G KL S
Sbjct: 233 VAKDKFHVS-YRGAKLNSSS 251
>gi|239908123|ref|YP_002954864.1| protein-PII uridylyltransferase [Desulfovibrio magneticus RS-1]
gi|239797989|dbj|BAH76978.1| putative protein-PII uridylyltransferase [Desulfovibrio magneticus
RS-1]
Length = 884
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
T ++++ DRVGLL ++ LA++ AKV T GR+ + YV+ +G +ED +
Sbjct: 805 FTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVR-GPAGRRVEDPE 863
Query: 176 QIDRIEARLRNVLKGD 191
Q+ I+A L + L D
Sbjct: 864 QLAEIKAALLHRLADD 879
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++A
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQA 879
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G D +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|449134434|ref|ZP_21769935.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
gi|448887064|gb|EMB17452.1| protein-P-II uridylyltransferase [Rhodopirellula europaea 6C]
Length = 883
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNLD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 834 DKIKKREKAFNVPTHITFDNDGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K ES +E L
Sbjct: 894 TYGEQVVDTFYVKDMFGLKYYSESKQRTLEAKL 926
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 23/164 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ + + LA +VV+A+ +T +G + +++D + G P E + ++ R++
Sbjct: 757 ADHPGIFARIAGALALAGANVVDARSYTTKDGYVTDAFWIQDAD-GHPFE-AARLPRLKQ 814
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ LKG+ R A T D+ +R T +T N
Sbjct: 815 MIHKTLKGEVVARDALKT-----------------RDKIKKREKAFNVPTH---ITFDND 854
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ TL + +A I T GE+
Sbjct: 855 GSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQ 898
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL+ DR GLL+ + + + S+ AK+ T R+ + +V
Sbjct: 805 TIH---NDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVT 861
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D N+ P+ D Q R++ + L D D
Sbjct: 862 DENN-QPLSDPQLCMRLQEAIVEQLTVDKD 890
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF VT
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N L+D + +++++
Sbjct: 862 DENNQPLSDPQLCMRLQEAI 881
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNDGETI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ +++RI L L+ +D + +RR+ + L+H
Sbjct: 760 GNNPARVERIRKGLTEALRNPDDYPNI----------IQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGER 853
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ ++ +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILNDAQRAVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 824 RPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 878
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R+ +++ + DR LL + + + + +A I T GER
Sbjct: 798 FNFPPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGER 853
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++A
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQA 879
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G D +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V++ R G LL+ + L +L L + KA + D + F +
Sbjct: 84 TPKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAI 143
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ I
Sbjct: 144 TKADTGRKVEDPELLEAI 161
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE 92
P +L+ V++A R G+L++ V+ +TD+N+ ++ ++G FHV+ +
Sbjct: 210 PDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS------YRGK 263
Query: 93 SVISYIEQSLETIHYGR 109
++I ++Q+ T GR
Sbjct: 264 AIIKPLQQNFNTTKLGR 280
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +ED +
Sbjct: 98 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAITKADTGRKVEDPEL 157
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N + + S ++ + +A T + Q + D + H +
Sbjct: 158 LEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPK--QQVDVD-------IATH-----I 203
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ DR S++ V+ DR LL D+V ++TD+ V +T G
Sbjct: 204 SVNDDGPDR--SLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEG 249
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+K+ I + T VV D+ P +++ +++A R G+LLE ++++ D N+ ++ A I ++G
Sbjct: 173 KKVDIDIATHIVVEDDG--PKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGL 230
Query: 74 FFMDVFHVTDLNGNKLTDES 93
D FHV+ G KL S
Sbjct: 231 VAKDKFHVS-YRGAKLNSSS 249
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + LA + +VV+A+ +T +G + +++D + G+P D ++ R+
Sbjct: 743 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDAD-GNPY-DVSRLPRLRK 800
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
+ L G+ V TE M D+ +R + T +T N
Sbjct: 801 MIERTLMGE-------------VVTTE----AMKSRDKVKKRERAFKVPTH---ITFDNE 840
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYCC 302
Y+++ V +DR LL D+ TL + + +A I T GE+ +V Y D
Sbjct: 841 GSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQ--VVDTFYVKDMFGLK 898
Query: 303 IYSAFK 308
YSA K
Sbjct: 899 YYSASK 904
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 835 ITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDM 894
Query: 85 NGNKLTDESVISYIEQSLET 104
G K S +E+ L T
Sbjct: 895 FGLKYYSASKQRTLERRLRT 914
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK------ 88
++ V+ + G+ + +++ L I + +S+DG++ VF V + +
Sbjct: 20 PAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGLLKK 79
Query: 89 --------LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ S ISY L+ + F L+L DR GLL +V VL +L
Sbjct: 80 RLVGACPSCSSASGISYYTAELQPPR--PPDVF----LLKLACHDRKGLLHDVTGVLCEL 133
Query: 141 QCSVVEAKV-WTHNGRIASLIYVKD---CNSGSPIEDSQQIDRIEARLRN-VLKGDNDIR 195
+ ++ + KV T +GR+ L +V D C ED+ D + A + N ++ D ++
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTSSCIXNKRKEDTY--DHLRAVMGNSMISCDIEMV 191
Query: 196 SAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQC 254
++T S + + + + + + +P ST V+ + N ++++V + C
Sbjct: 192 GPEITACSAESSFLPTAITENILPLQMPDELPSSLTSTSVSVI-MDNLLSPAHTLVQIVC 250
Query: 255 KDRTKLLFDVVCTLTD 270
+D LL+D++ TL D
Sbjct: 251 QDHKGLLYDIMRTLKD 266
>gi|114562088|ref|YP_749601.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
gi|114333381|gb|ABI70763.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 882
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
DR GL ++F LA L+ SV +A++ T +G + V D + PI +Q+ +++ +
Sbjct: 711 DRHGLFVKLFNTLATLRISVKQAQIARTKDGYVVESFKVLDFDE-KPITSAQRREQVIDK 769
Query: 184 LRNVL-KGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNW 242
L VL KG V++ RR HQ + P + +
Sbjct: 770 LHQVLDKG----------VNLPKKRQSRR-HQSF---------------DNQPNIEFLHS 803
Query: 243 ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
+ S+VNV D ++ + + +++ + ATI+T GERA
Sbjct: 804 RKSTRSLVNVSALDTSEFMEQIASAFRELDLNIHSATISTVGERA 848
>gi|323446654|gb|EGB02739.1| hypothetical protein AURANDRAFT_68609 [Aureococcus anophagefferens]
Length = 587
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT---HNGRIASLI---YVKDCNSGSP 170
T L + DR GLL+ + A L L SVV A++ T + R S + V D ++G+P
Sbjct: 52 TTLRVAAPDRPGLLASIAASLDALSLSVVGARITTVDAPDAREPSAVDAFDVVDADTGAP 111
Query: 171 IEDSQQIDRIEARL 184
+ D ++ RIEARL
Sbjct: 112 VLDPARLRRIEARL 125
>gi|347731600|ref|ZP_08864693.1| HD domain protein [Desulfovibrio sp. A2]
gi|347519648|gb|EGY26800.1| HD domain protein [Desulfovibrio sp. A2]
Length = 983
Score = 41.6 bits (96), Expect = 0.49, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN + T+V+V + R +L + +VL L L I A I++ G D F V
Sbjct: 898 PEVRIDNELSDFHTVVEVFTPDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVR 957
Query: 83 DLNGNKLTDESVISYIEQSL 102
+ G K+TDE + + +L
Sbjct: 958 TVYGQKITDEQQMDEVRAAL 977
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR LL +V VL LQ ++ AK+ T R + V+ G I D QQ
Sbjct: 911 TVVEVFTPDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVRTV-YGQKITDEQQ 969
Query: 177 IDRIEARLRNVL 188
+D + A L +V+
Sbjct: 970 MDEVRAALLHVV 981
>gi|242061630|ref|XP_002452104.1| hypothetical protein SORBIDRAFT_04g019755 [Sorghum bicolor]
gi|241931935|gb|EES05080.1| hypothetical protein SORBIDRAFT_04g019755 [Sorghum bicolor]
Length = 108
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSM-AVTHTERRLHQMMFADRDYE---RMPVL 228
D ++ RI ARL ++L+GD + A V V H +RRLHQ+M AD D P L
Sbjct: 9 DDDRVARILARLGHLLRGDGEAPGAVAAVPATGVAHADRRLHQLMAADLDRASSFSAPAL 68
Query: 229 RHSTDYPVVTVQN 241
P V+VQ+
Sbjct: 69 -----SPAVSVQS 76
>gi|421611743|ref|ZP_16052875.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
gi|408497456|gb|EKK01983.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
Length = 883
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
>gi|32472257|ref|NP_865251.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|417301637|ref|ZP_12088784.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|440715491|ref|ZP_20896036.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
gi|32443493|emb|CAD72935.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|327542055|gb|EGF28552.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|436439516|gb|ELP32943.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
Length = 883
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+++F+ T L + DR LLS++ L+ L + AK+ TH +IA + YV + + GS
Sbjct: 801 NDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTNPD-GS 859
Query: 170 PIEDSQQIDRIEARLRNVL 188
PI DS DR E +RN L
Sbjct: 860 PITDS---DRQET-IRNAL 874
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ V + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 824 RPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCRRLQEAI 881
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGER 853
>gi|320160714|ref|YP_004173938.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
gi|319994567|dbj|BAJ63338.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
Length = 1219
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+V+DN TL+ + S G L E L + I + I + + DV +VTDL
Sbjct: 672 IVVDNDSSEHLTLLHIQSQDTVGFLYELTNALAITGIYIDRVRIETVNQRVRDVLYVTDL 731
Query: 85 NGNKLTDES 93
NGNK+T E
Sbjct: 732 NGNKITSEE 740
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
+D G+ + + LA + +VV+A+ +T +G + +++D + G+P D+ ++ R+
Sbjct: 753 SDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDAD-GNPY-DATRLPRLRK 810
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+ L G+ V TE A + +++ + P +T N
Sbjct: 811 MIERTLMGE-------------VVTTE--------AIKSRDKVKKRERAFKVPTHITFDN 849
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFDSNYC 301
Y+++ V +DR LL D+ TL + + +A I T GE+ +V Y D
Sbjct: 850 EGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQ--VVDTFYVKDMFGL 907
Query: 302 CIYSAFK 308
YSA K
Sbjct: 908 KYYSASK 914
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 845 ITFDNEGSEIYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDM 904
Query: 85 NGNKLTDESVISYIEQSL 102
G K S +E+ L
Sbjct: 905 FGLKYYSASKQRNLERRL 922
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 201 PKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS 250
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +S++G F +T
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 83 DLN-GNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
+ G K+ D +++ Y +S E + G
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L + DR GLL E+ V+AD+ V A++ T
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEG 240
>gi|348029866|ref|YP_004872552.1| UTP-GlnB uridylyltransferase [Glaciecola nitratireducens FR1064]
gi|347947209|gb|AEP30559.1| UTP-GlnB uridylyltransferase [Glaciecola nitratireducens FR1064]
Length = 877
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
ATLV++++ G+L + + DLNL +K A IS+ G DVF V++ G LT E
Sbjct: 798 ATLVELEALDAPGLLAKIGHLFVDLNLTLKMAKISTIGERAEDVFIVSNEEGKALTQEQE 857
Query: 95 ISYIEQ 100
I+ +Q
Sbjct: 858 ITLKKQ 863
>gi|344199967|ref|YP_004784293.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrivorans
SS3]
gi|343775411|gb|AEM47967.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrivorans
SS3]
Length = 863
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ +DN P TL++V +A G+L + + L L L I A +S+ G D F + +
Sbjct: 778 IRVDNRALPRYTLLEVRAADHLGLLYQVGEALRALQLNIHGAKVSTFGERVEDTFFILNE 837
Query: 85 NGNKLTDESVISYIEQSLETIHYGRS 110
G+KLTD + + Q+L I G++
Sbjct: 838 CGHKLTDAQAKA-LTQTLGNILNGKA 862
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 121 LTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDR 179
L G DR GL ++ L ++++A++ T +GR V D + D D
Sbjct: 682 LYGLDRPGLFQQITGALDRQSLNIIDARIDTSEDGRALDTFLVIDNSHAFAHSDQAHTD- 740
Query: 180 IEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
+ A LR V++G+ + + H + R R + +P + V
Sbjct: 741 LAAELRAVIEGETASKP-----RFGLRHRDPR-------HRFFAHVPA--------EIRV 780
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER---AYLVIN 292
N A Y+++ V+ D LL+ V L ++ + A ++T GER + ++N
Sbjct: 781 DNRALPRYTLLEVRAADHLGLLYQVGEALRALQLNIHGAKVSTFGERVEDTFFILN 836
>gi|294631639|ref|ZP_06710199.1| uridylyltransferase [Streptomyces sp. e14]
gi|292834972|gb|EFF93321.1| uridylyltransferase [Streptomyces sp. e14]
Length = 817
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
AT+++V + G+L Q + D + ++ A++S+ G +D F+VT L+G L D+
Sbjct: 745 ATVIEVRAQDAPGLLFRLGQAMEDAKVRVRSAHVSTLGANAVDAFYVTALDGAPLPDDEA 804
Query: 95 ISYIEQSLETI 105
S + ET+
Sbjct: 805 ASLARRVEETL 815
>gi|218885967|ref|YP_002435288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756921|gb|ACL07820.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 967
Score = 41.6 bits (96), Expect = 0.52, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN + T+V+V + R +L + +VL L L I A I++ G D F V
Sbjct: 882 PEVRIDNELSDFHTVVEVFAPDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVR 941
Query: 83 DLNGNKLTDESVISYIEQSL 102
+ G K+TDE + + +L
Sbjct: 942 TVYGQKITDEQQMDEVRAAL 961
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+ DR LL +V VL LQ ++ AK+ T R + V+ G I D QQ
Sbjct: 895 TVVEVFAPDRPALLYDVARVLQALQLDILFAKIATLGNRTSDSFSVRTV-YGQKITDEQQ 953
Query: 177 IDRIEARLRNVL 188
+D + A L +V+
Sbjct: 954 MDEVRAALLHVV 965
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + ++ AK+ T R+ + ++ +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFIT-TKAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++V+ D+N+ ++ A I ++G D FHV+
Sbjct: 202 PKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS 251
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+ID AT+V++ R G LL+ ++ L DL L + K +S++G F +T
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 83 DLN-GNKLTDE------------SVISYIEQSLETIHYGRSNSFNGL------------- 116
+ G K+ D +++ Y +S E + G
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 117 --------TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN 153
+ L + DR GLL E+ V+AD+ V A++ T
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEG 241
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPIED 173
G ++ + D GL S + V+A +++ A + T+ NG++ ++ V + G I D
Sbjct: 709 GFSSFTICTFDTPGLFSMITGVMAANGMNILGAHILTNLNGKVLDVLQV-NSPQGFVITD 767
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
+ R+E +R VL+G I + ++R A++ + P
Sbjct: 768 EARWQRVEDDMRQVLEGKTKIAAL----------VKKRHRAAFLAEKAKPKFPTR----- 812
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
V + N Y+V+++ D+ LL+ + L+++ + + ++T
Sbjct: 813 ---VEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVST 858
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L L++L L I + +S+ DVF+V D
Sbjct: 812 RVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKD 871
Query: 84 LNGNKLTDESVISYIEQSL 102
+ G K+ D+ + I L
Sbjct: 872 IFGQKILDQDKLEEIRGRL 890
>gi|317152370|ref|YP_004120418.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942621|gb|ADU61672.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 873
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN TLV+V + R G L + + L+ L I A I++ D+FHV
Sbjct: 787 PIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAADIFHVR 846
Query: 83 DLNGNKLTDESVISYIEQSL 102
D G KLTD I + + L
Sbjct: 847 DHTGAKLTDPERIETLRRDL 866
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 32/154 (20%)
Query: 55 VLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE---SVISYIEQSL--------- 102
L LN+L + +D + +DVF V++ DE V IEQ+L
Sbjct: 709 ALHGLNILAADLFTWAD-KTAVDVFTVSEPQDTLFMDEIWPRVARSIEQALTGRLDLAAR 767
Query: 103 ------ETIHYGRS------------NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
+H G S + T +E+ DR+G L ++ L+ S+
Sbjct: 768 LAERRNSPLHKGNSAPRLRPIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSI 827
Query: 145 VEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQID 178
AK+ T GR A + +V+D ++G+ + D ++I+
Sbjct: 828 HIAKITTIKGRAADIFHVRD-HTGAKLTDPERIE 860
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
TL+++ + R G+L +V + L + A I++ G DVF+VTD GN L D+ I
Sbjct: 805 TLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGNNLYDDDFI 864
Query: 96 SYIEQSLE 103
+++ LE
Sbjct: 865 HRLKERLE 872
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +EL DR GLL+ V V A+ + AK+ T R+ + YV D G+ + D
Sbjct: 805 TLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSR-GNNLYDDDF 863
Query: 177 IDRIEARLR---NVLKG 190
I R++ RL N L G
Sbjct: 864 IHRLKERLEHELNALSG 880
>gi|357446731|ref|XP_003593641.1| Phosphorylase [Medicago truncatula]
gi|355482689|gb|AES63892.1| Phosphorylase [Medicago truncatula]
Length = 1055
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
++N+ +T + + + G+L +V L L I KA + +G +F F VTD +G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 87 NKLTDESVISYIEQSL 102
NK+ D+ + I+++L
Sbjct: 113 NKIEDDENLERIKRAL 128
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N T LELT DR GLL+ V + + ++ AK+ T R+ + ++ + +G P+ D
Sbjct: 816 NERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITN-KAGEPLTD 874
Query: 174 SQQIDRIEARLRNVL 188
++ ++ RL VL
Sbjct: 875 PERQQQLRERLIEVL 889
>gi|308812784|ref|XP_003083699.1| ACT domain-containing protein (ISS) [Ostreococcus tauri]
gi|116055580|emb|CAL58248.1| ACT domain-containing protein (ISS) [Ostreococcus tauri]
Length = 521
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 43/218 (19%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKD---- 164
++S L L++ G DRVGLL +V L +LQ ++ A V T +G L YV D
Sbjct: 212 THSQQSLYILQVEGHDRVGLLHDVTLALWELQLTLHRAHVTTSPSGNAVDLFYVTDDLHE 271
Query: 165 -CNSGSPIEDSQQIDRI------EARLRNVL--------KGDNDIRSAKMTVSMAVTHTE 209
N E S++I + EA N+L I++ + M VT
Sbjct: 272 LPNPARVGEISRKIKPVVASTPEEANRVNILIHPAPAFVTRQGRIKTLRAAEGMVVT--- 328
Query: 210 RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
Q D+E M V V N +++V V+ +DR LL+D +
Sbjct: 329 ----QANEVPSDFETM-----------VEVDNLMSPAHTVFQVRTRDRQGLLYDCLRVSK 373
Query: 270 DMEYVVFHATINTAGERAYLVI-----NCYQFDSNYCC 302
D++ V +A + + V+ N Q ++Y C
Sbjct: 374 DLKVSVSYAKVEIVDKAVCEVVLFTRKNKDQEQTDYLC 411
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESI 759
Query: 172 -EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ Q++++I L + L+ +D T +RR+ + L+H
Sbjct: 760 GNNPQRVEQIRKGLTDALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL+ DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 805 TIH---NDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 164 DCNSGSPIEDSQQIDRIE 181
D ++ P+ D Q R++
Sbjct: 862 DAHN-QPLSDPQLCSRLQ 878
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 801 APEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPQLCSRLQDAI 881
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LELT
Sbjct: 764 ARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
++ LE+ DR GLL+ + + D SV AK+ T R+ + Y+ D + P+ D
Sbjct: 814 VSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARN-QPLADPD 872
Query: 176 QIDRIEARLRNVLKGDN 192
R++A L L DN
Sbjct: 873 LCKRLQAALVEQLSQDN 889
>gi|414882133|tpg|DAA59264.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 135
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE ++++ D N+ ++ A I ++G D FHV+ G KL
Sbjct: 54 PKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS-YRGGKL 109
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P V DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 834 DKIKKRERAFNVPTHVTFDNEGSEIYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIA 893
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K E+ +E L
Sbjct: 894 TYGEQVVDTFYVKDMFGLKYHSEAKQRGLEAKL 926
>gi|117924711|ref|YP_865328.1| UTP-GlnB uridylyltransferase, GlnD [Magnetococcus marinus MC-1]
gi|117608467|gb|ABK43922.1| UTP-GlnB uridylyltransferase, GlnD [Magnetococcus marinus MC-1]
Length = 924
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 27/182 (14%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R+N + T + + D GL+S + LA S++ A T +A I+V
Sbjct: 731 RTNPASHTTDMLIYCQDHPGLISRISGALAMESISILSANGNTTKDGMALDIFVIQDWQA 790
Query: 169 SPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVL 228
P+ D ++ ++ L +L G +LH D P +
Sbjct: 791 QPVADLEKQQMVKQTLAKILSG--------------------KLH----PDTHKAHKPKI 826
Query: 229 RHSTDYPVVTVQNW---ADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
R + V T NW A Y+++ + ++R LL V TLT+ + I T GE
Sbjct: 827 RKEDHFMVPTAVNWDHHASEIYTIMEITTRNRFGLLHAVTRTLTEEGAQISTCKIATYGE 886
Query: 286 RA 287
+A
Sbjct: 887 KA 888
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 32/198 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 92 -----------------ESVISYIEQSL--ETIHYG-------RSNSFNGLTALELTGTD 125
E+ + I++ + + H+ +++ +T LE+T D
Sbjct: 764 QRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI-EARL 184
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R+ EA +
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQEAIV 882
Query: 185 RNVLKGD-NDIRSAKMTV 201
+ + G +D +++T+
Sbjct: 883 QQLQAGQGSDTSPSRLTI 900
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A ++ L ++ +A++ T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ Q R+R + G + A T +RR+ + L+H
Sbjct: 760 GDNPQ------RVRQIRDG---LSEALRNPENYPTIIQRRVPRQ------------LKHF 798
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 114 NGLTAL-ELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
G T L E+ TDR GLL + A LAD V A V T YV D SG+PI
Sbjct: 701 TGTTGLVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDP-SGTPI- 758
Query: 173 DSQQIDRIEARLRNVLKGD 191
D Q +R E L ++GD
Sbjct: 759 DPDQRERAERALVAAVRGD 777
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+++V R G+L + ++ L+L I A++++ G DVF+VTDL G ++T +
Sbjct: 862 TVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQ 921
Query: 96 SYIEQSL 102
+ I+++L
Sbjct: 922 AAIKRAL 928
>gi|90415791|ref|ZP_01223724.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
gi|90332165|gb|EAS47362.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
Length = 904
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 85/210 (40%), Gaps = 37/210 (17%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS--D 71
+K VI +N V I P AT + V S R L LNL I A ++S D
Sbjct: 687 QKAVILINDVGVEI-----PVATQIFVHSKDRANNFSIIASALDRLNLNIHDARLNSNSD 741
Query: 72 GRFFMDVFHVTD-------------------LNGNKLTDESVISYIEQ---------SLE 103
G F DVF+V D L+G + +Y++Q +L+
Sbjct: 742 GSAF-DVFYVLDEQDQPIGQDRLRCEKIVQTLSGAIADPSKINAYVQQRTPRQLKNFALK 800
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
T R + LE+ DR GLL+ + + + V+ AK+ T R+ + Y+
Sbjct: 801 TTAKLRHDVDANCVILEIITPDRPGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLT 860
Query: 164 DCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
D N P+ DS + A +R+ L N+
Sbjct: 861 DKNF-EPLTDSDVSAALTATIRSELDQRNE 889
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 762
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
+ + + + ++L TIH +++ +T LEL
Sbjct: 763 ERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 819
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 820 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 871
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 758
Query: 172 EDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ +++ I L L+ +D ++ R+L FA
Sbjct: 759 GDNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 762
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
+ + + + ++L TIH +++ +T LEL
Sbjct: 763 ERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 819
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 820 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 871
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 758
Query: 172 EDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ +++ I L L+ +D ++ R+L FA
Sbjct: 759 GDNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 762
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
+ + + + ++L TIH +++ +T LEL
Sbjct: 763 ERAQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 819
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 820 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 871
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 758
Query: 172 EDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ I L L+ +D ++ R+L FA
Sbjct: 759 GDNPERAQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESVI 95
T+++V R G+L + ++ L+L I A++++ G DVF+VTDL G ++T +
Sbjct: 859 TVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQ 918
Query: 96 SYIEQSL 102
+ I+++L
Sbjct: 919 AAIKRAL 925
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSS 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ +++ I L L+ +D ++ R+L FA
Sbjct: 759 GDNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 860 TDANNHPLSDPQLCSQLQDAI 880
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 703 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 762
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
+ + + + ++L TIH +++ +T LEL
Sbjct: 763 ERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 819
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 820 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 871
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 758
Query: 172 EDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ +++ I L L+ +D ++ R+L FA
Sbjct: 759 GDNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNDGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
I I L TIH +++ +T LELT
Sbjct: 764 TRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNDGESI 759
Query: 172 EDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ +I +I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPTRIKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D +G+ + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I L TIH +++ +T LELT
Sbjct: 764 ARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRQVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE ++++ D N+ ++ A I ++G D FHV+ G KL
Sbjct: 189 PKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS-YRGGKL 244
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 32 CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT 90
CP +L+ V++A R G+L++ V+++TD+N+ ++ ++G FHV+ NG ++
Sbjct: 212 CPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVS-YNGKAIS 269
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +E+ +
Sbjct: 101 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPEL 160
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 161 LEAIRLTIINNLIQYHPESSSRLALGAA-----------------FGLLPP-KEQVDVDI 202
Query: 237 VTVQNWAD--RSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
T N +D S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 203 ATHINISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEG 252
>gi|334345822|ref|YP_004554374.1| UTP-GlnB uridylyltransferase GlnD [Sphingobium chlorophenolicum
L-1]
gi|334102444|gb|AEG49868.1| UTP-GlnB uridylyltransferase, GlnD [Sphingobium chlorophenolicum
L-1]
Length = 919
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ ++ + +E+ L
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 208 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGDNP 267
Query: 92 ---ESVISYIEQSLE--------------------------TIHYGRSNSFNGLTALELT 122
+ + + + ++L TIH +++ +T LEL
Sbjct: 268 ERVQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 324
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ + + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 325 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 376
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 306 PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 365
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + S ++ ++
Sbjct: 366 DANNHPLSDPQLCSQLQDAI 385
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
F G T + + D+ + A + L ++ +A++ T + + Y+ N G I
Sbjct: 205 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIG 264
Query: 173 DS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D+ +++ I L L+ +D ++ R+L FA
Sbjct: 265 DNPERVQEIRNGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------- 305
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 306 ---PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 357
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKL 89
P +++ +++A R G+LLE ++++ D N+ ++ A I ++G D FHV+ G KL
Sbjct: 189 PKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS-YRGGKL 244
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 878
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|294013488|ref|YP_003546948.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
gi|292676818|dbj|BAI98336.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
Length = 919
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ ++ + +E+ L
Sbjct: 886 DLLAGKIESKARLQTLERRL 905
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T LE+ DRVGLL + L +LQ + AK+ T ++A + YV+ + G + D +Q
Sbjct: 786 TILEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADVFYVR-THQGEKVSDPEQ 844
Query: 177 IDRIEARLRNVLKGDNDI 194
ID ++ L L G ++
Sbjct: 845 IDELKRALLFWLDGPAEM 862
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L DL +VV+A V+ + + + ++G ++D +
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
+++I + N L + SA++ + A F + P + ST +
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEA------------FGIVPPKEKPDVDISTR--I 218
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ +R S+++++ DR LL ++V TL+D+ V +T G
Sbjct: 219 HIYDDGPNR--SLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEG 264
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V ID P AT+V+V R G LL+ + L DL L + KA + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 83 DLN-GNKLTDESVISYI 98
+ G K+ D + I
Sbjct: 160 RADTGRKVDDPEALEQI 176
>gi|359483143|ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+ TP+V+ID P AT+V++ R G LL+ + L +L L + KA + D + F
Sbjct: 82 IPTPKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTF 141
Query: 80 HVTDLN-GNKLTDESVISYI 98
+T + G K+ D ++ I
Sbjct: 142 AITKADTGRKVEDPELLEAI 161
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +ED +
Sbjct: 98 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAITKADTGRKVEDPEL 157
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N + + S ++ + +A T + Q + D + H +
Sbjct: 158 LEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPK--QQVDVD-------IATH-----I 203
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ DR S++ V+ DR LL D+V ++TD+ V +T G
Sbjct: 204 SVNDDGPDR--SLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEG 249
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
G + + D GL S + V+A +++ A++ T NG+ ++ V + G I
Sbjct: 708 KGYSNFTICTLDVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQV-NSPQGFVIT 766
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
D + R+E +R VL+G K+ V V ++R + ++ + P
Sbjct: 767 DESRWQRLEDDMRQVLQG-------KVRVGTLV---KKRYRPTILTEKPKPKFPTR---- 812
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
V + N Y+V+++ D+ LL+ + TLT++ + + ++T
Sbjct: 813 ----VEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVST 858
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV IDN V T++ + + + G+L LT+L L I + +S+ DVF+V D
Sbjct: 812 RVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKD 871
Query: 84 LNGNKL 89
+ G+KL
Sbjct: 872 IFGHKL 877
>gi|441145462|ref|ZP_20963771.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440621082|gb|ELQ84103.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 749
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 7 PACLDEYEKLVIRMN------TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLN 60
PA L E E+ R + PRV + +AT+++V + G+L + L
Sbjct: 643 PARLAEREQAYARRSRGVQAPPPRVTVAPGSSQSATVIEVRAQDAQGLLHRIGRALEAAG 702
Query: 61 LLIKKAYISSDGRFFMDVFHVTDLNGNKLTDES---VISYIEQSLE 103
+ ++ A++S+ G +D F+VT G L D + V +E++L+
Sbjct: 703 VTVRSAHVSTLGANAVDAFYVTTEKGEPLPDAAATEVAQAVERALK 748
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LELT
Sbjct: 764 TRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESI 759
Query: 172 EDSQ-QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ ++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GDNPTRVKQIREGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LELT
Sbjct: 764 ARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELT 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDS 174
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D
Sbjct: 821 APDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHN-QPLSDP 871
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ N G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + S ++ ++
Sbjct: 861 TDAHNQPLSDPLLCSRLQDAI 881
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + +L+D + S ++ ++
Sbjct: 862 DAHNQQLSDPQLCSRLQDAI 881
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ Q++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GNNPQRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVF 79
+ TP+V+ID P AT+V+V R G LL+ + L +L L + KA + D + F
Sbjct: 71 IPTPKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTF 130
Query: 80 HVTDLN-GNKLTDESVISYI 98
+T + G K+ D ++ I
Sbjct: 131 SITKASTGRKVDDPELLEAI 150
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G ++D +
Sbjct: 87 TVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDPEL 146
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + +A + + A R V
Sbjct: 147 LEAIRLTIINNLLQYHPESSSQLAMGIAFGVEPPKQVDVDIATR---------------V 191
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
++ DR S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 192 KVKEDSPDR--SLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEG 237
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + +L+D + S ++ ++
Sbjct: 862 DAHNQQLSDPQLCSRLQDAI 881
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ Q++ +I L L+ +D T +RR+ + L+H
Sbjct: 760 GNNPQRVKQIRDGLTEALRNPDDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 798 FAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 853
>gi|124360724|gb|ABN08701.1| Amino acid-binding ACT [Medicago truncatula]
Length = 328
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG 86
++N+ +T + + + G+L +V L L I KA + +G +F F VTD +G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 87 NKLTDESVISYIEQSL 102
NK+ D+ + I+++L
Sbjct: 113 NKIEDDENLERIKRAL 128
>gi|171914691|ref|ZP_02930161.1| protein-P-II uridylyltransferase, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 934
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV I+N + ++++ + R G+L + + L L I A I+++ +D ++ D
Sbjct: 836 RVYINNDLTTDYNVIEIQALDRIGLLYDIFMAIGQLGLNICHARINTEKGVALDAIYIQD 895
Query: 84 LNGNKLTDESVISYIEQSLE--TIHYGRSNSFNGLTAL 119
K+TD+ V+ ++ LE +GR NS +G+ AL
Sbjct: 896 KAEQKVTDKDVLKELQAQLEEAVFSFGRQNS-SGMLAL 932
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 36/174 (20%)
Query: 45 RHGILLEAVQVLT--DLNLLIKKAYISSDGRFFMDVFHV--TDLNG--NKLTDESVISYI 98
RH +L L ++N+L Y SD +DVF V TD + N+ T V S +
Sbjct: 743 RHLLLARIAGALAAQNINILSADLYQRSDD-VVLDVFRVCRTDFSPVTNERTKARVESSV 801
Query: 99 EQSLETIHYGRSN-------SFNGL---------------------TALELTGTDRVGLL 130
+ S ET + S S GL +E+ DR+GLL
Sbjct: 802 KTSFETGEFDFSQAIQENRRSLKGLEDVAAEVPQRVYINNDLTTDYNVIEIQALDRIGLL 861
Query: 131 SEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
++F + L ++ A++ T G IY++D + + D + ++A+L
Sbjct: 862 YDIFMAIGQLGLNICHARINTEKGVALDAIYIQD-KAEQKVTDKDVLKELQAQL 914
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTD-- 91
T + + + +H V + LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 92 ---ESVISYIEQSLETI----------------HYG-------RSNSFNGLTALELTGTD 125
+ + + ++L T H+ +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRI-EARL 184
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R+ EA +
Sbjct: 824 RPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQEAII 882
Query: 185 RNVLKGD-NDIRSAKMT 200
+ + G ++ ++MT
Sbjct: 883 QQLQAGQASEASPSRMT 899
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A +A L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D + +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRTPEDYPAI----------IQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGER 853
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + ++ ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 799 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 858
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 859 DADNQPLSDPQLCSRLQEAI 878
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 701 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 760
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 761 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 820
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++ +
Sbjct: 821 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQEAIV 879
Query: 186 NVLKGDNDIRSAKMTVSM 203
L+ +++ V+
Sbjct: 880 QQLQAGQGSDTSQTRVTF 897
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 697 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 756
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 757 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 794
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 795 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 850
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 799 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 858
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 859 DADNQPLSDPQLCSRLQEAI 878
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 701 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 760
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 761 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 820
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 821 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 875
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 697 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 756
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 757 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 794
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 795 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 850
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++ +
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQEAIV 882
Query: 186 NVLKGDNDIRSAKMTVSM 203
L+ +++ V+
Sbjct: 883 QQLQAGQGSDTSQTRVTF 900
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 878
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 24 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 80
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 81 DANN-HPLSDPQ 91
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 20 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 79
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + S ++ ++
Sbjct: 80 TDANNHPLSDPQLCSQLQDAI 100
>gi|302838269|ref|XP_002950693.1| hypothetical protein VOLCADRAFT_81196 [Volvox carteri f.
nagariensis]
gi|300264242|gb|EFJ48439.1| hypothetical protein VOLCADRAFT_81196 [Volvox carteri f.
nagariensis]
Length = 304
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 6 WPACLDEYEKLV---IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
W C D YEKL ++M++ V K D AR G+L +AV + TD+ L
Sbjct: 51 WNECADTYEKLAGCYLKMDSKHEAATAFVEAAKACGKQDQARSQGLLRQAVNLYTDMGRL 110
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
+ R ++ + G K E I Y Q+ + S S L++
Sbjct: 111 ------NMAARQLKEIAEQMEKAGQK---EEAIQYYTQAADLFEMENSASEATKCKLKIA 161
Query: 123 G-TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR-------IASLIYVKDCNSGSPIEDS 174
+ +G S+ + D VE + ++ R I +L Y+K P++
Sbjct: 162 EFSAEMGRYSKAMEIFEDAARRAVENNLLKYSARGYLLQAGICALCYLK------PVDIE 215
Query: 175 QQIDR 179
+++D+
Sbjct: 216 KKLDK 220
>gi|149374439|ref|ZP_01892213.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
gi|149361142|gb|EDM49592.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
Length = 881
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD +G +++D +V ++Q L
Sbjct: 838 KIATLGERVEDVFFVTDEHGEQISDPAVCQALQQDL 873
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R +G + + + +DR+ L + AVL L ++V+A++ + G + Y+ G
Sbjct: 689 RGGPTDGYSQIIIYMSDRIDLFAATTAVLEQLNLNIVDARISSSEGPFSISSYIVLDEKG 748
Query: 169 SPIE-DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP- 226
P+ D + DR+ RL L D + D + R P
Sbjct: 749 KPLGIDPARKDRVRMRLIEELDDPED-----------------------YPDIIHRRTPR 785
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
L+H VT N +V+ V DR LL V L + + +A I T GER
Sbjct: 786 QLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGER 845
>gi|255560331|ref|XP_002521182.1| amino acid binding protein, putative [Ricinus communis]
gi|223539629|gb|EEF41213.1| amino acid binding protein, putative [Ricinus communis]
Length = 214
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++++ D+N+ ++ A I ++G D FHV+
Sbjct: 133 PKRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKFHVS 182
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 20/176 (11%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+S + T+++++ DR+G L + L DL V + V T ++ +SG
Sbjct: 15 DSDSDATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFITRLDSGRK 74
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPVL 228
+ED ++RI + N L + S ++ + A + ER+L D + +
Sbjct: 75 VEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKL--------DVDIATHI 126
Query: 229 RHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
D P S++ ++ DR LL +++ + D+ V A I+T G
Sbjct: 127 HVKDDGP----------KRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEG 172
>gi|303282169|ref|XP_003060376.1| glycosyltransferase family 35 protein [Micromonas pusilla CCMP1545]
gi|226457847|gb|EEH55145.1| glycosyltransferase family 35 protein [Micromonas pusilla CCMP1545]
Length = 1027
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDVFHVT 82
VV+D A P T++ V + R GIL L DL L +++ + SDG D F+VT
Sbjct: 79 VVVDGASDPANTVISVRATNRPGILQLMKMTLQDLGLTVERTEVDMDSDG-VVSDTFYVT 137
Query: 83 DLNGNKLTDESVISYIEQSLETI---HYGRSN 111
+G ++ D ++ IEQ + + HY +S+
Sbjct: 138 GDDGIRVEDPYDLANIEQVVTFVMNAHYLKSS 169
>gi|357974494|ref|ZP_09138465.1| PII uridylyl-transferase [Sphingomonas sp. KC8]
Length = 917
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+V++++ R +L L + I A+I++ G +DVF+VT
Sbjct: 826 PVVLIDNRASNRYTVVEINARDRPALLNALAHALFQSKVTIHSAHIATYGERAVDVFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G+K+T + + +E+ L
Sbjct: 886 DLTGDKVTGATRLKALERRL 905
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ + +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILNDAQRPVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLR 185
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++ +
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQEAIV 882
Query: 186 NVLKGDNDIRSAKMTVSM 203
L+ +++ V+
Sbjct: 883 QQLQAGQGSDTSQTRVTF 900
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FDFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 529 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 585
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 586 DANN-HPLSDPQ 596
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 525 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 584
Query: 82 TDLNGNKLTDESV 94
TD N + L+D +
Sbjct: 585 TDANNHPLSDPQL 597
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 424 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 483
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 484 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 525
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 526 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 577
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ D +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
D + L+D + S ++ ++ + R + +G + LT
Sbjct: 862 DADNQPLSDPQLCSRLQDAI--VEQLRVDQASGTESFRLT 899
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
+T LEL DR GLL+ + + D S+ AK+ T R+ + ++ D ++ P+ D Q
Sbjct: 814 VTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQ 872
Query: 176 QIDRIEARLRNVLKGDN 192
R++ + L+ D
Sbjct: 873 LCSRLQDAIVEQLRVDQ 889
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP-VLR 229
+ Q++ +I L + L+ +D S + H R+P L+
Sbjct: 760 GNNPQRVKQIRDGLSDALRNPDDYPS--------IIH---------------RRVPRQLK 796
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
H P VT+ N A R +++ + DR LL + D + + +A I T GER
Sbjct: 797 HFAFPPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGER 853
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 802 PQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFIT 861
Query: 83 DLNGNKLTDESVISYIEQSL 102
D + L+D + S +++++
Sbjct: 862 DADNQPLSDPQLCSRLQEAI 881
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V ++ LNL I A I+S +F +D + V D +G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGDNP 763
Query: 94 -----------------------VISYIEQSLETIHYGR-----SNSFNGLTALELTGTD 125
+ + + L+ ++ +++ +T LE+T D
Sbjct: 764 QRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILNDAQRQVTILEITAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D Q R++
Sbjct: 824 RPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQLCSRLQ 878
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A ++ L ++ +A++ T + + Y V D + GS
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSI 759
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
++ Q++ +I L L+ D T +RR+ + L+H
Sbjct: 760 GDNPQRVKQIRDGLTEALRNPEDY----------PTIIQRRVPRQ------------LKH 797
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +++ + DR LL + + + + +A I T GER
Sbjct: 798 FNFPPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGER 853
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 30/170 (17%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSL--------------------ETIHYG-------RSNSFNGLTALELTGTD 125
+ I + L + H+ +++ +T LEL+ D
Sbjct: 764 ARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPD 823
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
R GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D +
Sbjct: 824 RPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPE 872
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCLRLQEAI 881
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ AR++ + +G + +R+ ++ R+L FA
Sbjct: 760 GDN------PARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGER 853
>gi|455651557|gb|EMF30283.1| PII uridylyl-transferase [Streptomyces gancidicus BKS 13-15]
Length = 808
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
PRV + A AT+++V + G+L + L D + ++ A++S+ G +D F+V
Sbjct: 723 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 782
Query: 82 TDLNGNKLTDESVISYIEQSLETIHYG 108
T G L E ++ + + LE G
Sbjct: 783 TQERGVPLPGEEAVA-VARKLEEALRG 808
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 124 TDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEA 182
D G+ S + LA + +VV+A+ +T +G + +++D G P E + ++ R+
Sbjct: 725 ADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDAFWIQDAE-GHPYE-AARLPRLSQ 782
Query: 183 RLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV-VTVQN 241
+ LKG+ R A RD ++ + + P +T N
Sbjct: 783 MILKTLKGEVVARDA-------------------LKSRD--KIKKREKAFNVPTHITFDN 821
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
Y+++ V +DR LL+D+ L + +A I T GE+
Sbjct: 822 EGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQ 866
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 11 DEYEKLVIRMNTP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
D+ +K N P + DN T+++VD+ R G+L + + L N+ I A I+
Sbjct: 802 DKIKKREKAFNVPTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIA 861
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
+ G +D F+V D+ G K E+ +E L
Sbjct: 862 TYGEQVVDSFYVKDMFGLKYHSEAKQRTLETKL 894
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 760 GDNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCRRLQEAI 881
>gi|390169710|ref|ZP_10221643.1| PII uridylyl-transferase [Sphingobium indicum B90A]
gi|389587714|gb|EIM65776.1| PII uridylyl-transferase [Sphingobium indicum B90A]
Length = 919
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V+IDN T+++V++ R +L L + + A++++ G +D F+VT
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL K+ + + +E+ L
Sbjct: 886 DLLAGKIESKGRLQTLERRL 905
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 760 GDNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCRRLQEAI 881
>gi|242086641|ref|XP_002439153.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
gi|241944438|gb|EES17583.1| hypothetical protein SORBIDRAFT_09g001450 [Sorghum bicolor]
Length = 447
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 32/284 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T++ V+ + G+ + + + + L I + +S+DG + VF V +
Sbjct: 45 TVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIKIRWASL 104
Query: 87 -NKLTDESVISY-IEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSV 144
N+L SY I + G S + L+L DR GLL +V +L+DL+ +
Sbjct: 105 KNRLMSMCPSSYSIPFYPDISQPGPSQYY----LLKLLSPDRKGLLHDVTHILSDLELII 160
Query: 145 VEAKVW-THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLK--GDN---DIRSA- 197
KV T +GR+ L ++ D +E + +R E ++ G + ++ SA
Sbjct: 161 HRVKVCTTPDGRVVDLFFITDG-----MELLHKKERQEETCSTLIATLGPSISCEVLSAE 215
Query: 198 --KMTVSMAVTHTERRLHQMMFADRDY--ERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
+ S L ++ AD + + V + N ++++V +
Sbjct: 216 GFQQGFSSLPPKIAEELFRVELADSEICSSSLSVELKKVQTATINFDNSLSPAHTLVQII 275
Query: 254 CKDRTKLLFDVVCTLTDMEYVVFHATINTAGERAYLVINCYQFD 297
C D+ L++D++ T+ D +F+ + ++ + C + D
Sbjct: 276 CADQKGLIYDILRTMKDCNIQIFYGRFRS-DKKGSVSKGCREVD 318
>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]
Length = 282
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V++ R G LL+ + L +L L + KA + D + F +
Sbjct: 75 TPKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSI 134
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ I
Sbjct: 135 TKADTGRKVEDPELLEAI 152
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +V +A V+ + + + ++G +ED +
Sbjct: 89 TVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSITKADTGRKVEDPEL 148
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ +M V Q + D + H + Y
Sbjct: 149 LEAIRLTIINNLLQYHPESSSQL--AMGVAFGVEPPKQQVDVD-------IATHISVY-- 197
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
+ DR S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 198 ---DDGPDR--SLLFVETADRPGLLVDLVKIITDINVAVDSGEFDTEG 240
>gi|301058661|ref|ZP_07199662.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447225|gb|EFK10989.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 866
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
++VI+N TL+++ + R G+L + V+ ++L I+ A + SDG VF+V D
Sbjct: 781 KIVINNDESDFFTLIELRAGARLGLLYDVACVMFKMDLDIRAAKVDSDGEKMNGVFYVRD 840
Query: 84 LNGNKLTDESVISYIEQSL 102
G K+ + S ++ + L
Sbjct: 841 SAGEKVYEPSAMAETKHRL 859
>gi|345002318|ref|YP_004805172.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
gi|344317944|gb|AEN12632.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
Length = 816
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
++ PRV + A AT+++V + G+L + L + ++ A++S+ G +D
Sbjct: 728 VKAPPPRVTVAPAGSRLATVIEVRAQDAPGLLHRIGRALEQSAVRVRSAHVSTLGANAVD 787
Query: 78 VFHVTDLNGNKLTDE---SVISYIEQSL 102
F+VTD +G L E V +E++L
Sbjct: 788 AFYVTDPDGEPLVPERAAQVAGEVEKAL 815
>gi|289768850|ref|ZP_06528228.1| protein-P-II uridylyltransferase [Streptomyces lividans TK24]
gi|289699049|gb|EFD66478.1| protein-P-II uridylyltransferase [Streptomyces lividans TK24]
Length = 835
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
+ PRV + A AT+++V + G+L + L + ++ A++S+ G +D
Sbjct: 746 VEPPPPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVD 805
Query: 78 VFHVTDLNGNKLT-DE--SVISYIEQSLET 104
F+VT G L DE SV +E+SL T
Sbjct: 806 AFYVTRGEGTPLPGDEAASVARGLEESLRT 835
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPI 171
F G T + + D+ + A + L ++ +A+V T + + Y+ G I
Sbjct: 700 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESI 759
Query: 172 EDSQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
D+ + R++ + KG D +R+ ++ R+L FA
Sbjct: 760 GDNPE------RVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFA------------ 801
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 802 ----PEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGER 853
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKLTDES 93
T + + + +H V + LNL I A I+S +F +D + V D G + D
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGDNP 763
Query: 94 V-ISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
+ I + L TIH +++ +T LEL+
Sbjct: 764 ERVKKIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIH---NDAQRPVTVLELS 820
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIE 181
DR GLL+ + + + S+ AK+ T R+ + ++ D ++ P+ D + R++
Sbjct: 821 APDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPELCRRLQ 878
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V I N T++++ + R G+L + + +L ++ A I++ G DVF +
Sbjct: 801 APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD + L+D + +++++
Sbjct: 861 TDADNQPLSDPELCRRLQEAI 881
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ DN V T++ + + + G+L LT L L I + IS+ DVF+V D
Sbjct: 819 RIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRD 878
Query: 84 LNGNKLTDESVISYIEQSLET 104
+ G+K+ DE+ + + + L++
Sbjct: 879 IFGHKIMDEAKLESVRERLKS 899
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 111 NSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGS 169
N +G + + D GL S + V+A +++ A++ T NG++ ++ V + G
Sbjct: 712 NRESGYSEFTICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQV-NSPRGK 770
Query: 170 PIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
I D ++ VL G+ D+ A+ +R Q+M +R
Sbjct: 771 IIGDENCWKKVRDDTERVLLGEADV--------AAMVDKRQRPSQLM-----------VR 811
Query: 230 HSTDYPV-VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ +P + N Y+V+++ D+ LL+ + TLT + + + I+T
Sbjct: 812 PAPRFPTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKIST 865
>gi|334187430|ref|NP_001190227.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332003395|gb|AED90778.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 200
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 6 WPACLDEY---EKLVIRMNTPRVVIDNAV-------CPTATLVKVDSARRHGILLEAVQV 55
+P C ++ E I+ ++ +D A P +L+ +++A R G+++E ++V
Sbjct: 82 YPECSEQLAMGETFGIKAPEKKIDVDIATHIHVKEDGPKRSLLVIETADRPGLVVEMIKV 141
Query: 56 LTDLNLLIKKAYISSDGRFFMDVFHVT 82
+ D+N+ ++ A I ++G D FHV+
Sbjct: 142 MADVNIDVESAEIDTEGLVAKDKFHVS 168
>gi|21223940|ref|NP_629719.1| PII uridylyl-transferase [Streptomyces coelicolor A3(2)]
gi|7387705|sp|O69873.1|GLND_STRCO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|3191978|emb|CAA19377.1| putative protein pII uridylyltransferase [Streptomyces coelicolor
A3(2)]
Length = 835
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
+ PRV + A AT+++V + G+L + L + ++ A++S+ G +D
Sbjct: 746 VEPPPPRVTVAPAASRLATVIEVRAQDAPGLLFRLGRALEAAGVRVRSAHVSTLGANAVD 805
Query: 78 VFHVTDLNGNKLT-DE--SVISYIEQSLET 104
F+VT G L DE SV +E+SL T
Sbjct: 806 AFYVTRGEGTPLPGDEAASVARGLEESLRT 835
>gi|126724979|ref|ZP_01740822.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2150]
gi|126706143|gb|EBA05233.1| PII uridylyl-transferase [Rhodobacteraceae bacterium HTCC2150]
Length = 920
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L + N+ I A I++ G +D F+V D+
Sbjct: 830 ITFDNEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVKDM 889
Query: 85 NGNKLTDESVISYIEQSL 102
G K +E +E+ L
Sbjct: 890 FGLKFHNEGKQRTLEKRL 907
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQIDRIEAR 183
D G+ S + LA +VV+AK +T +G + ++ +++D + G P D + R+
Sbjct: 739 DHPGIFSRMAGALALAGANVVDAKSYTTKDGLVTAVFWIQD-HDGKPY-DETRYKRMTQM 796
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV---VTVQ 240
+ +KG+ R A DRD + + D+ V +T
Sbjct: 797 IDKTMKGEVVARDA-------------------LVDRD----KIKKREKDFRVPTTITFD 833
Query: 241 NWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
N Y+++ V +DRT LL D+ TL + + A I T G
Sbjct: 834 NEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYG 877
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ V++A R G+L+E ++++ D+N+ ++ A I ++G D FHV+
Sbjct: 137 PKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS 186
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T ++L+ DR+G L + L DL V + V T + ++ +SG +ED
Sbjct: 25 TIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFITRLDSGRKVEDPDM 84
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMA--VTHTERRLHQMMFADRDYERMPVLRHSTDY 234
++RI + N L + S ++ + A + E++L D + + D
Sbjct: 85 LERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKL--------DVDITTHVHVKEDG 136
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
P S++ V+ DR LL +++ + D+ V A I+T G
Sbjct: 137 P----------KRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEG 176
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 205 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 261
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 262 DANN-HPLSDPQ 272
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 202 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 261
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + ++ ++
Sbjct: 262 DANNHPLSDPQLCRQLQDAI 281
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 101 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 160
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D ++ R+L FA
Sbjct: 161 NNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------- 201
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 202 ---PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 253
>gi|302835559|ref|XP_002949341.1| hypothetical protein VOLCADRAFT_89705 [Volvox carteri f.
nagariensis]
gi|300265643|gb|EFJ49834.1| hypothetical protein VOLCADRAFT_89705 [Volvox carteri f.
nagariensis]
Length = 1009
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V +DN T++ V +A + G+L + D+ + + KA + D D F+V L
Sbjct: 72 VFVDNNSDTNFTVINVQAANKPGLLTAITALFRDIGVDVGKAVVDGDENKINDTFYVRTL 131
Query: 85 NGNKLTDESVISYIEQSLETIHYGRSNS 112
G KL+D+ + +SLE + + +S
Sbjct: 132 TGGKLSDDKAADAV-RSLEVLLRSKPSS 158
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 634 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 690
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 691 DANN-HPLSDPQ 701
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 630 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 689
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 690 TDANNHPLSDPQLCRQLQDAI 710
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 529 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 588
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 589 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 630
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 631 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 682
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ + N + AT++ + + R G+L E ++ +LI+ A I++ G DVF++TD
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 85 NGNKLTDESVISYIEQSL 102
NG L D + +++ L
Sbjct: 877 NGEMLHDPEFCATLKERL 894
>gi|319786517|ref|YP_004145992.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoxanthomonas suwonensis
11-1]
gi|317465029|gb|ADV26761.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoxanthomonas suwonensis
11-1]
Length = 876
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 117 TALEL--TGTDRVGLLSEVFAVLADLQCSVVEAKV-WTHNGRIASLIYVKDCNSGSPIED 173
TALE+ DR GL + + A L + +A+V +G + V +S + +
Sbjct: 690 TALEVFVHSPDRDGLFAAIVATLDRHGYGIHQARVLMGPHGTVFDTFEVLPADSFASGDP 749
Query: 174 SQQIDRIEARLRNVLKGDND-IRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHST 232
+Q +EA LR+ L G+ D +R+ + T R+L F
Sbjct: 750 AQ----LEAALRDALSGELDRVRATRRA-------TPRQLRHFRFT-------------- 784
Query: 233 DYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P V AD S++++ C DR LL +V L V A I T GERA
Sbjct: 785 --PKVEFNTTADGRRSLISLVCPDRPGLLAEVALALRACRLRVHDARIATFGERA 837
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 852
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ V + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 852
>gi|407692400|ref|YP_006817189.1| PII uridylyl-transferase [Actinobacillus suis H91-0380]
gi|407388457|gb|AFU18950.1| PII uridylyl-transferase [Actinobacillus suis H91-0380]
Length = 848
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 43/202 (21%)
Query: 6 WPACLDEY------EKLV------IRMNT-PRVVIDNAVCPTATLVKVDSARRHGILLEA 52
W C D Y ++LV ++ T P V++ N AT + V + +
Sbjct: 626 WAPCPDGYFLRNTPKQLVWHALDYLKHKTLPMVLVSNEYARGATEIFVHCNDQPQLFARI 685
Query: 53 VQVLTDLNLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI------ 105
Q L+ + I A I +S+ D F VT+L+G +L D S + QSL+ +
Sbjct: 686 AQALSQKKISIHDAQIITSNNGLVFDSFIVTELSGAEL-DPSRCEQVRQSLQRVLTDAES 744
Query: 106 -------------HYGRSNSFNGL-------TALELTGTDRVGLLSEVFAVLADLQCSVV 145
+ R+ L T+ EL DR GLL++V + L+ +V
Sbjct: 745 VTFKLLRKPVKHQSFKRTTKVKFLSDEHPNQTSFELFTLDREGLLAQVSHIFGQLELVLV 804
Query: 146 EAKVWTHNGRIASLIYVKDCNS 167
AK+ T R+ V C S
Sbjct: 805 NAKITTIGERVEDFFVV--CTS 824
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 36/173 (20%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKA-YISSDGRFFMDVFHVTDLNGNKL-TDE 92
T + + + +H V + LNL I A I+S +F +D + V D G + +
Sbjct: 185 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGNNP 244
Query: 93 SVISYIEQSLE------------------------------TIHYGRSNSFNGLTALELT 122
I I + L TIH +++ +T LEL
Sbjct: 245 ERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQVTIH---NDAQRPVTVLELL 301
Query: 123 GTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
DR GLL+ V + + S+ AK+ T R+ + ++ D N+ P+ D Q
Sbjct: 302 APDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANN-HPLSDPQ 353
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +T
Sbjct: 283 PQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFIT 342
Query: 83 DLNGNKLTDESVISYIEQSL 102
D N + L+D + ++ ++
Sbjct: 343 DANNHPLSDPQLCRQLQDAI 362
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 23/175 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSPI 171
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 182 FEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIG 241
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 242 NNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKHF 279
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL V + + + +A I T GER
Sbjct: 280 AFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGER 334
>gi|283781890|ref|YP_003372645.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
gi|283440343|gb|ADB18785.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
Length = 885
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV DN T+V V + R G+L + L +L L + A I + +DVF+VT
Sbjct: 797 RVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVDVFYVTT 856
Query: 84 LNGNKLTDESVISYIEQSL 102
L G K+ DE + I L
Sbjct: 857 LGGAKIVDEKRLEEIRAKL 875
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
+N+ T + + DR+GLL + L +L+ SV AK+ TH ++ + YV G+
Sbjct: 802 NNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVDVFYVTTLG-GA 860
Query: 170 PIEDSQQIDRIEARL 184
I D ++++ I A+L
Sbjct: 861 KIVDEKRLEEIRAKL 875
>gi|254785172|ref|YP_003072600.1| PII uridylyl-transferase [Teredinibacter turnerae T7901]
gi|237686077|gb|ACR13341.1| protein-P-II uridylyltransferase [Teredinibacter turnerae T7901]
Length = 905
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 17 VIRMNTPRVV----------IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
V+R TPRV+ I N + T+++V S R G+L QV + ++ ++ A
Sbjct: 796 VVRRRTPRVLKQFSVPTRTSISNDIVSGNTVLEVISPDRPGLLATIGQVFMEHDVQLQNA 855
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTD 91
IS+ G DVF +TD + L D
Sbjct: 856 KISTLGERVEDVFFITDADNQPLGD 880
>gi|147828198|emb|CAN66473.1| hypothetical protein VITISV_029959 [Vitis vinifera]
Length = 462
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIE 181
DR GLL +V VL +L+ ++ KV T +GR+ L +V D + + Q+ I R++
Sbjct: 81 DRKGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFVTDTRNELHTKKRQEDTIHRLK 140
Query: 182 ARLRNVLKG-DNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
A L + + + ++ ++T S + + + +F+ +++ VT+
Sbjct: 141 AVLGDAMMSVEIELAGPEVTACSQGSSFLPPAITEEIFSLELPNERSNGSAASNSLSVTM 200
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTD 270
N S++++ + C+D L++D++ TL D
Sbjct: 201 DNSLSPSHTLIQIICQDHKGLIYDIMRTLKD 231
>gi|197118260|ref|YP_002138687.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
bemidjiensis Bem]
gi|197087620|gb|ACH38891.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter bemidjiensis Bem]
Length = 894
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P+ L E K + RV IDN V T++ + + + G+L LT L L I +
Sbjct: 796 PSILSEKAKPTV---PARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVS 852
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
IS+ DVF+V D+ G K+ + + I + L
Sbjct: 853 KISTKVDQVADVFYVKDIFGQKIMNPGKLEEIRKEL 888
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV TAT+++V + HG+L + L + ++ A+IS+ G +D F+VT
Sbjct: 753 PRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYVT 812
Query: 83 DLNGNKL 89
D +G L
Sbjct: 813 DPDGEPL 819
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSD--GRFFMDVFHVT 82
+V+DN + P TLV++ G+L + ++ L D N+ I S G+ +D+F +
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 83 DLNGNKLTDESVISYIEQSLET----------IHYGRSNSFNGLTALELTGTDRVGLLSE 132
++G K+ D S + L+T + G +EL+G R + +
Sbjct: 287 QVDGKKIVDPSKKESLSSRLKTELLRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFYD 346
Query: 133 VFAVLADLQCSVVEAKVWTH 152
+ L L + A+V H
Sbjct: 347 ITLALKMLGLCIFSAEVGRH 366
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDE 92
T++ V+ + G+ + +++ +L I +A +S+DG++ VF V + L +
Sbjct: 20 TTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSLLKK 79
Query: 93 SVISYIE--QSLETIHYGRSNSFNGLTA----LELTGTDRVGLLSEVFAVLADLQCSVVE 146
+I+ S Y S+ N L+ DR GLL +V VL +L+ ++ +
Sbjct: 80 RLIAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTEVLCELELTIKK 139
Query: 147 AKV-WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAV 205
KV T +G++ L ++ D E + D IE +L VL+ ++ V
Sbjct: 140 VKVSTTPDGKVLDLFFITDTRELLHTEKRKD-DTIE-KLTTVLEDFFTTIDIEL-VGPET 196
Query: 206 THTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVV 265
T + + A D + ++D + + N ++++V + C+D LL+D++
Sbjct: 197 TAFSQPSSSLPNAITDVFDLQSGTSTSDSVSIVMDNTLSPAHTLVQIMCQDHKGLLYDIM 256
Query: 266 CTLTDM 271
TL D
Sbjct: 257 RTLKDF 262
>gi|255536729|ref|XP_002509431.1| glycogen phosphorylase, putative [Ricinus communis]
gi|223549330|gb|EEF50818.1| glycogen phosphorylase, putative [Ricinus communis]
Length = 949
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 28 DNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGN 87
D AT + + R G+L +V L L I+KA + +G F F+VTD +GN
Sbjct: 68 DPDATANATAFVIHARNRIGLLQVITRVFKLLGLRIEKATVELEGDHFAKTFYVTDSHGN 127
Query: 88 KLTDESVISYIEQSL 102
++ D + I+++L
Sbjct: 128 RIEDAESLDKIKKAL 142
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ V++A R G+LL+ VQ++TD+N+ ++ ++G FHV+
Sbjct: 209 PDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS 258
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G ++DS+
Sbjct: 97 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAITKADTGRKVDDSEL 156
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ + + N + + SA++ + A + Q+ D + L S D P
Sbjct: 157 LEAVRMTILNNMIQYHPESSAQLALGAAFGLVPPK-EQV-----DVDIATHLTISDDGP- 209
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
DR S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 210 -------DR--SLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEG 248
>gi|398335686|ref|ZP_10520391.1| [protein-PII] uridylyltransferase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 876
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 19 RMNTPRVVIDNAV------CPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG 72
R TP +++ +V P T+++V G++ +Q++ L+L ++ +S+
Sbjct: 772 RKPTPESIVNRSVMFYNGDLPDMTIMEVRMPDVVGLVYRILQIILHLDLKVRYLRVSTSA 831
Query: 73 RFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYG 108
+ D F++ +GNKL D ++ + + + TI +G
Sbjct: 832 DYAYDSFYIQTSDGNKLEDADLLFKLREKILTIQFG 867
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
P+V+ D+ + T T+++V + R G+L V+ L++L L + A +++ G +D F+
Sbjct: 681 GPPQVIFDDGLGST-TVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFY 739
Query: 81 VTDLNGNKLTDES 93
V + +G + D++
Sbjct: 740 VQEADGRPVADDT 752
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P V D+A AT+++V R G+L + V V+ L + I A+I G +D F+V
Sbjct: 844 APTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYV 903
Query: 82 TD 83
TD
Sbjct: 904 TD 905
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 30/202 (14%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMD 77
+N P V++ T + + S R + L NL + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG-MAMD 742
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL---------------ETIHYGRSNSFNGLTA- 118
F V + +G+ L+ + +I +EQ++ H+ N L
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 119 ------LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL D+ GLL+ V V ADL S+ A++ T R+ L + NS
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFIL--ANSERKAL 860
Query: 173 DSQQIDRIEARLRNVLKGDNDI 194
D + ++ RL L ++ +
Sbjct: 861 DEEMRQTLQQRLTEALNPNDKV 882
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V ID P AT+V+V R G LL+ ++ L DL L + KA + D + F +T
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 83 DLN-GNKLTDESVISYI 98
+ G K+ D + I
Sbjct: 160 RADTGRKVDDPEALEQI 176
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D T +RR+ + L+H
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY----------PTIIKRRVPRQ------------LKH 796
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 797 FAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 30/202 (14%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMD 77
+N P V++ T + + S R + L NL + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG-MAMD 742
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL---------------ETIHYGRSNSFNGLTA- 118
F V + +G+ L+ + +I +EQ++ H+ N L
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 119 ------LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL D+ GLL+ V V ADL S+ A++ T R+ L + NS
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFIL--ANSERKAL 860
Query: 173 DSQQIDRIEARLRNVLKGDNDI 194
D + ++ RL L ++ +
Sbjct: 861 DEEMRQTLQQRLTEALNPNDKV 882
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 104 TIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVK 163
TIH +++ +T LEL DR GLL+ + + + S+ AK+ T R+ + ++
Sbjct: 804 TIH---NDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFIT 860
Query: 164 DCNSGSPIEDSQ 175
D N+ P+ D Q
Sbjct: 861 DANN-HPLSDPQ 871
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
P+V I N T++++ + R G+L ++ + +L ++ A I++ G DVF +
Sbjct: 800 APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFI 859
Query: 82 TDLNGNKLTDESVISYIEQSL 102
TD N + L+D + ++ ++
Sbjct: 860 TDANNHPLSDPQLCRQLQDAI 880
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIY-VKDCNSGSP 170
F G T + + D+ + A + L ++ +A++ T + + Y V D GS
Sbjct: 699 EFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSI 758
Query: 171 IEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+ ++I I L L+ +D ++ R+L FA
Sbjct: 759 GNNPERIQDIREGLTEALRNPDDY------PTIIKRRVPRQLKHFAFA------------ 800
Query: 231 STDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
P VT+ N A R +V+ + DR LL + + + + +A I T GER
Sbjct: 801 ----PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGER 852
>gi|412985265|emb|CCO20290.1| predicted protein [Bathycoccus prasinos]
Length = 744
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQIDRIEAR 183
DRVGLL ++ L + V A + T A L YV D P ED ++ IE
Sbjct: 326 DRVGLLRDLTLTLWECALIVQRAHISTSPANTAVDLFYVMDTKDELPNED--RVQEIEMA 383
Query: 184 LRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMF-ADRDY-ERMPVL----------RHS 231
+R+V+ N+++ LHQ+ F A DY R L +
Sbjct: 384 VRSVVAHGNEVKVG--------------LHQVPFYAQGDYITRAGWLDDFSISQVESASA 429
Query: 232 TDYPV--VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATI 280
T+YP V V N ++V + +DR LL+D++ +++ +++A +
Sbjct: 430 TEYPSCDVWVDNLMSERHTVFQMISRDRKGLLYDILRASKELKVQIYYAKV 480
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 30/202 (14%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMD 77
+N P V++ T + + S R + L NL + A I S DG MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDG-MAMD 742
Query: 78 VFHVTDLNGNKLTDES---VISYIEQSL---------------ETIHYGRSNSFNGLTA- 118
F V + +G+ L+ + +I +EQ++ H+ N L
Sbjct: 743 TFIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTH 802
Query: 119 ------LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL D+ GLL+ V V ADL S+ A++ T R+ L + NS
Sbjct: 803 TDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFIL--ANSERKAL 860
Query: 173 DSQQIDRIEARLRNVLKGDNDI 194
D + ++ RL L ++ +
Sbjct: 861 DEEMRQTLQQRLTEALNPNDKV 882
>gi|159483955|ref|XP_001700026.1| alpha-SNAP [Chlamydomonas reinhardtii]
gi|158281968|gb|EDP07722.1| alpha-SNAP [Chlamydomonas reinhardtii]
Length = 303
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 20/184 (10%)
Query: 6 WPACLDEYEKLV---IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLL 62
WP C D YEKL ++M++ V K DS R +L +AV + TD+ L
Sbjct: 51 WPECSDMYEKLAQCYVKMDSKHEAAGALVEAAKATGKNDSVRAQNLLKQAVSIYTDMGRL 110
Query: 63 IKKAYISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELT 122
A R ++ + G K E I + ++ + SNS L++
Sbjct: 111 NMAA------RQLKEIAEQNEKAGQK---EEAIQFYAEAADLFETEGSNSEATKCKLKIA 161
Query: 123 G-TDRVGLLSEVFAVLADLQCSVVEAKVWTHNGR-------IASLIYVKDCNSGSPIEDS 174
+ +G S+ + D VE + ++ R I L+Y++ + + ++
Sbjct: 162 EFSAEMGRYSKAVELFEDAARRAVENNLLKYSARGYLLQAGICCLVYMRPDDVATKLDKY 221
Query: 175 QQID 178
+ ID
Sbjct: 222 RSID 225
>gi|413950196|gb|AFW82845.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 246
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T+V V+ + G+ + + + + L I +A +S+DG + VF V +
Sbjct: 105 TVVTVNCPDQTGLGCDLCRTILEFGLRITRADVSTDGHWCFVVFWVVPRSSSIKVRWASL 164
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNG---LTALELTGTDRVGLLSEVFAVLADLQC 142
N+L SY S+ + S G L+L DR GLL +V +L+DL+
Sbjct: 165 KNRLMSMCPSSY---SIPFFYRDVSQPEPGPLQFYLLKLMSPDRKGLLHDVTHILSDLEL 221
Query: 143 SVVEAKV-WTHNGRIASLIYVKD 164
+ KV T +GR+ L ++ D
Sbjct: 222 IIHRVKVSTTPDGRVVDLFFITD 244
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + +SG +ED +
Sbjct: 97 TVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDPEL 156
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMA---VTHTERRLHQMMFADRDYERMPVLRHSTD 233
++ I + N + + SA++ + A VT E+ D E + S D
Sbjct: 157 LEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQ---------VDVEIATHITISDD 207
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
P S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 208 GP----------KRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEG 248
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDE 92
P +L+ V++A R G+L++ V+++TD+N+ ++ ++G FHV D+
Sbjct: 209 PKRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHV------NYKDK 262
Query: 93 SVISYIEQSL 102
++I ++Q L
Sbjct: 263 ALIKPLQQVL 272
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 33 PTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +L+ +++A R G+L+E ++++ D+N+ ++ A I ++G D FHV+
Sbjct: 136 PKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS 185
>gi|323455780|gb|EGB11648.1| hypothetical protein AURANDRAFT_70849 [Aureococcus anophagefferens]
Length = 1274
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGR-----------IASLI 160
F+G T L ++ DR GLL ++ L L+ S+V AK+ T GR
Sbjct: 264 FSGATTLNVSLPDRPGLLKQITETLGSLRLSIVGAKISTVARGRDSPEDAGLPKTAVDTF 323
Query: 161 YVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
V D +G P+ D ++ IE RL L+ D
Sbjct: 324 DVVDAETGGPVLDPNRLREIERRLALDLETD 354
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 30/161 (18%)
Query: 56 LTDLNLLIKKA--YISSDGRFFMDVFHVTDLNGNK------------LTDESVI--SYIE 99
L+ L L I+ A Y S DG + +D F V D NG L DE + SY E
Sbjct: 731 LSGLQLDIQDARIYSSPDG-YTIDTFFVLDENGEPTSPDRFDLIRRALLDELALVNSYPE 789
Query: 100 ------------QSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEA 147
S+ + ++ G + LE+ DR GLL+ + V + A
Sbjct: 790 IISRRTPRMLKHFSMPSRTRLSNDLIAGTSVLEVISPDRPGLLAAIGRVFLQHGIQLQNA 849
Query: 148 KVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
K+ T R+ + ++ D + G+P+ D Q ++++ +R L
Sbjct: 850 KIATLGERVEDIFFITD-HDGNPLSDPAQCEQLQDNIRKAL 889
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 30/257 (11%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK------ 88
++ V+ + G+ + +++ L I + +S+DG++ VF V + +
Sbjct: 20 PAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGLLKK 79
Query: 89 --------LTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADL 140
+ S ISY L+ + F L+L DR GLL +V VL +L
Sbjct: 80 RLVGACPSCSSASGISYYTAELQPPR--PPDVF----LLKLACHDRKGLLHDVTGVLCEL 133
Query: 141 QCSVVEAKV-WTHNGRIASLIYVKDC----NSGSPIEDSQQIDRIEARLRN-VLKGDNDI 194
+ ++ + KV T +GR+ L +V D ++ ED+ D + A + N ++ D ++
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTRELLHTNKRKEDTY--DHLRAVMGNSMISCDIEM 191
Query: 195 RSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQ 253
++T S + + + + + + +P ST V+ + N ++++V +
Sbjct: 192 VGPEITACSAESSFLPTAITENILPLQMPDELPSSLTSTSVSVI-MDNLLSPAHTLVQIV 250
Query: 254 CKDRTKLLFDVVCTLTD 270
C+D LL+D++ TL D
Sbjct: 251 CQDHKGLLYDIMRTLKD 267
>gi|334144063|ref|YP_004537219.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalimicrobium cyclicum
ALM1]
gi|333964974|gb|AEG31740.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalimicrobium cyclicum
ALM1]
Length = 878
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHN-GRIASLIYVKDCN 166
G SN G + L L +R L +++ V L +VVEAKV+T N R L Y D
Sbjct: 692 GTSN--RGASELILLAKNRDFLFAQITQVFERLDLTVVEAKVYTSNDNRTLVLFYFLD-R 748
Query: 167 SGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMP 226
P++D + I +L L D+ + + HT R + D + P
Sbjct: 749 LNQPVQDQSALTEIRHQLLEQLSHDD------AGFTPVINHTRSRRIKHFSTPTDIQFKP 802
Query: 227 VLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+ T+ ++T KD LL V L D + + A I T GE+
Sbjct: 803 LSAQVTELTLIT----------------KDIPGLLSRVGSALRDNKIRLHDAKIVTIGEK 846
Query: 287 A 287
A
Sbjct: 847 A 847
>gi|225448926|ref|XP_002266940.1| PREDICTED: uncharacterized protein LOC100266711 [Vitis vinifera]
gi|296085960|emb|CBI31401.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIE 181
DR GLL +V VL +L+ ++ KV T +GR+ L +V D + + Q+ I R++
Sbjct: 122 DRKGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFVTDTRNELHTKKRQEDTIHRLK 181
Query: 182 ARLRNVLKG-DNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTV 239
A L + + + ++ ++T S + + + +F+ +++ VT+
Sbjct: 182 AVLGDAMMSVEIELAGPEVTACSQGSSFLPPAITEEIFSLELPNERSNGSAASNSLSVTM 241
Query: 240 QNWADRSYSVVNVQCKDRTKLLFDVVCTLTD 270
N S++++ + C+D L++D++ TL D
Sbjct: 242 DNSLSPSHTLIQIICQDHKGLIYDIMRTLKD 272
>gi|261211379|ref|ZP_05925667.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
gi|260839334|gb|EEX65960.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
Length = 876
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 72/194 (37%), Gaps = 29/194 (14%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYI--SSDGRFFMDV 78
+ P V++ T V V + + + V L NL + A I S DG + +D
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDG-YVLDT 735
Query: 79 FHVTDLNGNKLTDESVISYIEQSLETIHYGRSNSFNGL---------------------- 116
F V D NG + ++ + I + + GR +
Sbjct: 736 FMVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTLKARRIPRNLQHFKVKTQVDFLPTKS 795
Query: 117 ---TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
T +EL D GLL+ V A A+L + AK+ T R L + + ED
Sbjct: 796 KKRTLMELVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNED 855
Query: 174 SQQIDRIEARLRNV 187
+Q+ R E + NV
Sbjct: 856 EEQLLR-EKLIENV 868
>gi|189425747|ref|YP_001952924.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
gi|189422006|gb|ACD96404.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter lovleyi SZ]
Length = 900
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIE 172
+G ++ + D GL S++ V+A +++ A+++T NG+I ++ V G I
Sbjct: 710 SGFSSFTICTFDTHGLFSKITGVMAANGINILGAQIFTGKNGKILDILQVNSAQ-GFLIT 768
Query: 173 DSQQIDRIEARLRNVLKGDNDIRSAKMTVSMA-VTHTERRLHQMMFADRDYERMPVLRHS 231
D+ + ++EA + +VL G TV ++ + H RR + + P
Sbjct: 769 DAARWQKVEADMADVLHG---------TVQVSDLVH--RRQRPTLLPAKSARHFPTR--- 814
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINT 282
+ + N Y+V+++ D+ LL+ + T+ + + + I+T
Sbjct: 815 -----IEIDNEVSDEYTVIDIYAHDKVGLLYLITSTINQLGLYIGVSKIST 860
>gi|408529012|emb|CCK27186.1| [Protein-PII] uridylyltransferase [Streptomyces davawensis JCM
4913]
Length = 816
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV + A AT+++V + G+L + L D + ++ A++S+ G +D F+VT
Sbjct: 733 RVTVHPAASRLATVIEVRAQDAPGLLFRIGRALEDARVRVRSAHVSTLGANAVDAFYVTG 792
Query: 84 LNGNKLTDESVISYIEQSLETIH 106
G L E S + ET+
Sbjct: 793 PEGAPLPREEAASVARKLEETLR 815
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 115 GLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIED 173
G T D G+ + + LA + +VV+A+ +T +G + +++D + G+ E
Sbjct: 749 GATRASFVMADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQD-SEGNAYEA 807
Query: 174 SQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTD 233
S+ + R+ + L+G+ R A + V ER ++P H
Sbjct: 808 SR-LPRLRDTIEKTLRGEIVARDA-LKSRDKVKKRERAF-----------KVPT--H--- 849
Query: 234 YPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGER 286
+T N Y+++ V +DR LL+D+ TL + +A I T GE+
Sbjct: 850 ---ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQ 899
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ DN T+++VD+ R G+L + + L N+ I A I++ G +D F+V D+
Sbjct: 850 ITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDM 909
Query: 85 NGNKLTDESVISYIEQSL 102
G K E+ +E+ L
Sbjct: 910 FGLKYYTEAKQRTLEKRL 927
>gi|410623461|ref|ZP_11334274.1| [protein-PII] uridylyltransferase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156953|dbj|GAC29648.1| [protein-PII] uridylyltransferase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 877
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTDESV 94
ATLV++++ G+L + + DLNL +K A IS+ G DVF V++ G LT +
Sbjct: 798 ATLVELEALDAPGLLAKIGHLFVDLNLTLKLAKISTIGERAEDVFIVSNEEGKALTQDQE 857
Query: 95 ISYIEQ 100
I+ +Q
Sbjct: 858 ITLKKQ 863
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 21 NTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
P+V+ D+ + T T+++V + R G+L V+ L+ L L + A +++ G +D F+
Sbjct: 681 GPPQVIFDDGLGST-TVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFY 739
Query: 81 VTDLNGNKLTDES 93
V + +G + D++
Sbjct: 740 VQEADGRPVADDA 752
>gi|384248969|gb|EIE22452.1| glycoside hydrolase [Coccomyxa subellipsoidea C-169]
Length = 938
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 27 IDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISS-DGRFFMDVFHVTDLN 85
DN P AT+V + +H +LL L + L + A ISS D +DVF VT+
Sbjct: 99 FDNNTDPDATVVTITGPDQHNLLLRLTAALNSMGLNVVSASISSSDDGTVLDVFRVTNSE 158
Query: 86 GNKLTDESVISYIEQSLETIHYGRSNS 112
K+ ++S E LE + S S
Sbjct: 159 DQKVPEDSWDGVRESVLEMLAASSSRS 185
>gi|399544195|ref|YP_006557503.1| [protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
gi|399159527|gb|AFP30090.1| [Protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
Length = 881
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V++ N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVLLSNDSFNLRTVLEVITPDRPGLLARIGQVLLEHKVRLTTA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD NGN L D + ++ L
Sbjct: 838 KIATLGERVEDVFFVTDENGNALCDPAACQALQDDL 873
>gi|308802832|ref|XP_003078729.1| starch phosphorylase 3 (IC) [Ostreococcus tauri]
gi|116057182|emb|CAL51609.1| starch phosphorylase 3 (IC) [Ostreococcus tauri]
Length = 992
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 25 VVIDNAVCPTATLVKV-DSARRHGILLEAVQVLTDLNLLIKKAYI-SSDGRFFMDVFHVT 82
+ ID T++++ D+ + G L L DL L I+KA + S+ D+FHVT
Sbjct: 53 IEIDTTSEDAYTVIRINDAPNKPGTLRVITTALADLGLNIEKAIVDSAKDDLVSDIFHVT 112
Query: 83 DLNGNKLTDESVISYIEQSLETI 105
D +G+K+TD + I+ L I
Sbjct: 113 DSSGSKVTDAEDVENIKVCLSMI 135
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 118 ALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQI 177
A+E++ DRVGLLS++ AV+AD + +++ A+ TH A++ V + + +E Q+
Sbjct: 656 AVEISCYDRVGLLSDITAVVADTRRNILAARTRTHRDGTATIDLVVEVQN---LEQFDQL 712
Query: 178 DRIEARLRNVLK 189
R R+R+V++
Sbjct: 713 RRQLERVRDVIR 724
>gi|347530203|ref|YP_004836951.1| [protein-PII] uridylyltransferase [Sphingobium sp. SYK-6]
gi|345138885|dbj|BAK68494.1| [protein-PII] uridylyltransferase [Sphingobium sp. SYK-6]
Length = 928
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V+IDN T+V+V + R +LL L ++ A++++ G +D F++T
Sbjct: 828 PQVIIDNKASNRFTVVEVMARDRPALLLSLAFALFQSKTMVHSAHVATFGERAVDTFYLT 887
Query: 83 DLNGNKLTDESVISYIEQSL 102
DL G KL +S ++ +E+ L
Sbjct: 888 DLLGGKLESKSRLATLERRL 907
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 18 IRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMD 77
+ PRV + AT+++V + G+L + L D + ++ A++S+ G +D
Sbjct: 794 VHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVD 853
Query: 78 VFHVTDLNGNKL 89
F+VTD +G L
Sbjct: 854 AFYVTDASGAPL 865
>gi|88706585|ref|ZP_01104288.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
gi|88699081|gb|EAQ96197.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
Length = 892
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 29/158 (18%)
Query: 58 DLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLTD----ESVISYIEQSLETIHYG----- 108
DL++ + Y SDG +D + V D +GN + D + SY+ L
Sbjct: 731 DLSIHDARIYHGSDG-MSLDTYFVLDSSGNAVEDVERLRHITSYLSDKLSPTTNANFIPS 789
Query: 109 -----RSNSF-------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVW 150
R SF ++ LE+ DR GLL+ + V + AK+
Sbjct: 790 RLTPRRVRSFCLATETNMRIDPVREVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKIQ 849
Query: 151 THNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
T R+ + +V D PI D ++I+A +R+ L
Sbjct: 850 TLGERVEDVFFVTDTEQ-QPIRDEALAEKIQAAIRDTL 886
>gi|220934331|ref|YP_002513230.1| (Protein-PII) uridylyltransferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995641|gb|ACL72243.1| (Protein-PII) uridylyltransferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 899
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I +G FN T L +T DR GLLS + L V AK+ T + + Y+ D
Sbjct: 817 IEFGDRLHFN-RTLLAITTGDRPGLLSRIGTTLTRCGIKVHNAKIATAGEQADDVFYITD 875
Query: 165 CNSGSPIEDSQQIDRIEARLRNVLK 189
PI+D ++ IE LR L+
Sbjct: 876 LED-RPIQDRERQGEIEKALREALE 899
>gi|148555679|ref|YP_001263261.1| metal dependent phosphohydrolase [Sphingomonas wittichii RW1]
gi|148500869|gb|ABQ69123.1| metal dependent phosphohydrolase [Sphingomonas wittichii RW1]
Length = 439
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P +IDN T+++V++ R +L L ++I A+I++ G +DVF+V
Sbjct: 347 PAALIDNRASNRYTVIEVNARDRPALLYALAHALFQAKVMIHSAHIATYGERAVDVFYVA 406
Query: 83 DLNGNKLTDESVISYIEQ 100
DL G+K+T + + +E+
Sbjct: 407 DLTGDKITSAARLKTLER 424
>gi|126666182|ref|ZP_01737162.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
gi|126629504|gb|EBA00122.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
Length = 881
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V++ N T+++V + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVLLSNDRFNLRTVLEVITPDRPGLLARIGQVLLEHRVRLTTA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF VTD NGN L D + ++ L
Sbjct: 838 KIATLGERVEDVFFVTDENGNALCDPAACQALQDDL 873
>gi|376296756|ref|YP_005167986.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio desulfuricans
ND132]
gi|323459318|gb|EGB15183.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio desulfuricans
ND132]
Length = 866
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V IDN T+V+V + R G L + + L L I A I++ DVFHV
Sbjct: 780 PLVTIDNRASDFYTVVEVAATDRIGFLFDMARTLAAHGLSIHLAMITTIQGRAADVFHVR 839
Query: 83 DLNGNKLTDESVISYIEQSL 102
+G +L DE+ + + + L
Sbjct: 840 TQDGQRLLDETRMDTLRRDL 859
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIE 172
LEL DRVGLLS+V + + SV A V T + ++ YV D SG+P++
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDA-SGNPVD 54
>gi|260913600|ref|ZP_05920076.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632139|gb|EEX50314.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 872
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 50/226 (22%)
Query: 6 WPACLDEYEKLVIRMNTPR-----------------VVIDNAVCPTATLVKVDSARRHGI 48
W C DEY N+P+ V I N T V V + +
Sbjct: 652 WQRCPDEY----FLRNSPKQIAWHTQLLAENETDLLVKISNRFSDGGTEVFVYCKDQPNL 707
Query: 49 LLEAVQVLTDLNLLIKKAYI--SSDGRFFMDVFHVTDLNGNKLT---DESVISYIEQSLE 103
+ V + I A I S DG F D F VT+L+GN + S+ ++ Q+L+
Sbjct: 708 FNKVVTTIGAKKFSIHDAQIITSHDGYVF-DTFMVTELDGNLVKFDRRRSLEKFLTQALQ 766
Query: 104 TI--------------HYGRSNSFNGL-------TALELTGTDRVGLLSEVFAVLADLQC 142
+ H+ L T +EL D+ GLL++V V ++L+
Sbjct: 767 STKLPKLTPLINRKLQHFSVKTEVRFLKENRTDQTEMELCALDQTGLLAKVSQVFSELKL 826
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVL 188
+++ AK+ T + + NS +Q + +E RL+ VL
Sbjct: 827 NLLNAKITTVGEKAEDFFIL--TNSNDHALSLEQREHLEKRLKEVL 870
>gi|152978704|ref|YP_001344333.1| PII uridylyl-transferase [Actinobacillus succinogenes 130Z]
gi|150840427|gb|ABR74398.1| metal dependent phosphohydrolase [Actinobacillus succinogenes 130Z]
Length = 858
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 50/231 (21%)
Query: 6 WPACLDEYEKLVIRMNTPRVVIDNAVCPTA----TLVKVDSARRHG-------------I 48
W C D+Y +R +TP+ + +A T LVK+ + G +
Sbjct: 635 WARCPDDY---FLR-STPKELAWHATLLTDFQGDMLVKISNRFSQGGTEVFLYCRDQAQL 690
Query: 49 LLEAVQVLTDLNLLIKKAYISS--DGRFFMDVFHVTDLNGNKLTDE----------SVIS 96
+ V + L I A IS+ DG + +D F VT+LNG L + ++
Sbjct: 691 FHKVVTTIGAKKLSIHSAQISTSLDG-YVLDTFVVTELNGALLKSDRRRELERAITEALT 749
Query: 97 YIEQ-SLETIHYGRSNSFN-------------GLTALELTGTDRVGLLSEVFAVLADLQC 142
Y E T+H + F+ T +EL D+ GLL+EV + DL
Sbjct: 750 YAENLKRATLHNHKLQPFHVKTEVRFLNTEKETHTEMELVALDKAGLLAEVSQIFGDLNL 809
Query: 143 SVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDND 193
+++ AK+ T + + + + + E + +E RL++ L D
Sbjct: 810 NLLNAKITTTGEKAEDFFRLTNLQNQALTESERH--ELEVRLKSRLNLPGD 858
>gi|224097482|ref|XP_002310954.1| predicted protein [Populus trichocarpa]
gi|222850774|gb|EEE88321.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P D + + TP+V+ID P AT+V++ R G LL+ + L +L L + KA
Sbjct: 58 PTVEDGSQNETDAIPTPKVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKA 117
Query: 67 YISSDGRFFMDVFHVTDLN-GNKLTDESVISYI 98
+ D + F +T + G K+ D ++ I
Sbjct: 118 NVFLDSSGKHNTFAITKSSTGRKVDDPELLEAI 150
>gi|262196341|ref|YP_003267550.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
gi|262079688|gb|ACY15657.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
Length = 916
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ IDN+ AT++ V + R G+L + L+D L I + +S+ G D+F+V
Sbjct: 831 IRIDNSASADATVIDVLTQDRVGVLHAISRTLSDFGLDIHLSKVSTQGEQVADIFYVVST 890
Query: 85 NGN-KLTDESVISYIEQSLE 103
+ KL D+S I+ +E L+
Sbjct: 891 STQRKLEDDSAIADLELRLQ 910
>gi|168057125|ref|XP_001780567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668045|gb|EDQ54661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 26 VIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS--SDGRFFMDVFHVTD 83
+++N P +L++++ R G+L + ++ + D NL + I+ +G ++V+ V
Sbjct: 250 IVENNTSPIHSLLQLNCKSRKGLLYDCLRTVKDFNLQVAHGRIAMMENGNSEINVY-VLG 308
Query: 84 LNGNKLTDESVISYIEQSLET-------IHYGRSNSFNGL---TALELTGTDRVGLLSEV 133
NG ++TD + QSLE I G L T++E G R +L +V
Sbjct: 309 PNGQRITDLQEQKVLVQSLEEEVGHPVRIKVGTRGPDTELLVATSIEKCGRGRPRVLYDV 368
Query: 134 FAVLADLQCSVVEAKVWTH 152
L L + +A + H
Sbjct: 369 TLALKMLDICIFKADIGRH 387
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 22 TP-RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFH 80
TP R+ I N T++++ + R G+L ++ + ++ ++KA ISS G D F
Sbjct: 794 TPTRMTISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFF 853
Query: 81 VTDLNGNKLTDESVISYIEQSL 102
+TD ++D + ++Q++
Sbjct: 854 ITDSQNQPISDPELCRELQQAI 875
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 35 ATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNGNK--LTDE 92
T++ V+ + G+ + +++ L I + +S+DG++ VF V + + L +
Sbjct: 21 PTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYLVFWVVGKSTTRWGLLKK 80
Query: 93 SVISYIEQ--SLETIHYGRSN----SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVE 146
++ S + + RS + L+L+ DR GLL +V +VL +L+ ++ +
Sbjct: 81 RLVEACPSCSSASGLSFYRSELQPPRPPDVFLLKLSCQDRRGLLHDVTSVLCELELTIKK 140
Query: 147 AKV-WTHNGRIASLIYVKD----CNSGSPIEDSQQIDRIEARLRN-VLKGDNDIRSAKMT 200
KV T +GR+ L ++ D ++ ED+ D ++A N ++ D +I ++T
Sbjct: 141 VKVSTTPDGRVIDLFFITDNRELLHTNKRKEDT--CDHLKAVTGNSMISCDIEIVGPEIT 198
Query: 201 V-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTK 259
S + + + + + +P ST V + N +++V + C+D
Sbjct: 199 ACSAESSFLPTAITENILPLEMPDELPSSLTSTSV-SVNMDNSLSPGHTLVQIVCQDHKG 257
Query: 260 LLFDVVCTLTDMEYVVFHATINTAGERA 287
LL+D++ TL D + + + RA
Sbjct: 258 LLYDIMRTLKDYNIQISYGRFSMNHGRA 285
>gi|297202641|ref|ZP_06920038.1| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
gi|297148159|gb|EDY57250.2| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
Length = 292
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
RV + A AT+++V + G+L + L D + ++ A++S+ G +D F+VTD
Sbjct: 209 RVTVAGAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYVTD 268
Query: 84 LNGNKLTDESVISYIEQSLETIH 106
G L S + ET+
Sbjct: 269 GKGAPLGAGEAASVARKLEETLR 291
>gi|293364819|ref|ZP_06611536.1| hypothetical protein HMPREF8579_0665 [Streptococcus oralis ATCC
35037]
gi|291316269|gb|EFE56705.1| hypothetical protein HMPREF8579_0665 [Streptococcus oralis ATCC
35037]
Length = 840
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 71 DGRFFMDVFHVTDL-NGNKLTDESVISYIEQSLET----IHYGRSNSFNGLTALELTGTD 125
DGR + DL GN + DE+ + +E+++ET + + S N AL TD
Sbjct: 469 DGRLH--IISTLDLAGGNVIKDETDTASLEKAVETAKSNVEQSTTASENAKKALTKASTD 526
Query: 126 RVGLLS---EVFAVLADLQCSVVEAKVWTHNGRIASL----IYVKDCNSGSPIED-SQQI 177
LS E VLAD + ++A+V +N R+A + ++ + + + S +
Sbjct: 527 YASALSLKTEAEKVLADAMATPLQAQVAENNLRLAEIALENAKTREATASEAVANFSAGL 586
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
+ L N K + +S + T S A+ +L
Sbjct: 587 ADKKVALENAQKALEEAKSVQTTASQALAEASAKLQ 622
>gi|119505664|ref|ZP_01627734.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
gi|119458476|gb|EAW39581.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
Length = 875
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 58 DLNLLIKKAYISSDGRFFMDVFHVTDLNGNKLT-DESVISYIEQSLE-----------TI 105
DL++ + Y+ DG +D F+V +GN ++ D + + I L T
Sbjct: 713 DLSVNDARIYLGGDGAT-LDTFYVLQADGNPVSGDLTTLGNIRDGLSAALTRQEIRTVTR 771
Query: 106 HYGR-SNSF-------------NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
H R SF G T LE+ DR GLL+ + AV ++ AK+ T
Sbjct: 772 HTPRRQKSFVIPTETSVHQDERRGWTVLEVATPDRPGLLANIGAVFVAQNVALQAAKIQT 831
Query: 152 HNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
R+ + +V + G+ I D+ +++ +E ++ L +
Sbjct: 832 LGERVEDVFFVT-TSDGNSINDAHKLNLLEDAVKQSLDAE 870
>gi|449449320|ref|XP_004142413.1| PREDICTED: uncharacterized protein LOC101203151 [Cucumis sativus]
gi|449487252|ref|XP_004157538.1| PREDICTED: uncharacterized protein LOC101230856 [Cucumis sativus]
Length = 412
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 128 GLLSEVFAVLADLQCSVVEAKVWT-HNGRIASLIYVKDCNSGSPIEDSQQ--IDRIEARL 184
GLL +V VL +L+ ++ KV T +G++ L ++ D Q+ + ++ L
Sbjct: 122 GLLHDVTEVLCELELTIRRVKVSTAPDGKMMDLFFITDTRELLHTRKRQEETMHHLKMIL 181
Query: 185 RNVLKG-DNDIRSAKMTV-SMAVTHTERRLHQMMFADRDYERMPVLRHSTDY-PVVTVQN 241
+VL + ++ + T S + + + +F+ + P RH + VV++ N
Sbjct: 182 ADVLMSCEIELAGPEFTACSQRSPNLPSSISEELFS-LELPHGPSNRHLPSHSAVVSIDN 240
Query: 242 WADRSYSVVNVQCKDRTKLLFDVVCTLTD----MEYVVFHATINTAGE 285
RS++V+ + C D L++D++ TL D + Y FH +N+ G+
Sbjct: 241 SISRSHTVIQLLCLDHKGLMYDIMRTLKDYNIQVSYGRFH--LNSKGK 286
>gi|87307240|ref|ZP_01089385.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
gi|87289980|gb|EAQ81869.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
Length = 882
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 105 IHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
I G S F + +E+ +RVGLL + + L SV AK+ TH ++ + YV D
Sbjct: 795 IDNGTSEQF---SIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSD 851
Query: 165 CNSGSPIEDSQQIDRIEARL 184
+G IED Q++ I L
Sbjct: 852 -EAGEKIEDEQRLQEIREHL 870
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
V IDN ++V+V + R G+L + + L L + A I++ +DVF+V+D
Sbjct: 793 VKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIATHLDQVVDVFYVSDE 852
Query: 85 NGNKLTDESVISYIEQSL 102
G K+ DE + I + L
Sbjct: 853 AGEKIEDEQRLQEIREHL 870
>gi|307703068|ref|ZP_07640015.1| surface exclusion protein PrgA [Streptococcus oralis ATCC 35037]
gi|307623461|gb|EFO02451.1| surface exclusion protein PrgA [Streptococcus oralis ATCC 35037]
Length = 839
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)
Query: 71 DGRFFMDVFHVTDL-NGNKLTDESVISYIEQSLET----IHYGRSNSFNGLTALELTGTD 125
DGR + DL GN + DE+ + +E+++ET + + S N AL TD
Sbjct: 468 DGRLH--IISTLDLAGGNVIKDETDTASLEKAVETAKSNVEQSTTASENAKKALTKASTD 525
Query: 126 RVGLLS---EVFAVLADLQCSVVEAKVWTHNGRIASL----IYVKDCNSGSPIED-SQQI 177
LS E VLAD + ++A+V +N R+A + ++ + + + S +
Sbjct: 526 YASALSLKTEAEKVLADAMATPLQAQVAENNLRLAEIALENAKTREATASEAVANFSAGL 585
Query: 178 DRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLH 213
+ L N K + +S + T S A+ +L
Sbjct: 586 ADKKVALENAQKALEEAKSVQTTASQALAEASAKLQ 621
>gi|254295439|ref|YP_003061462.1| PII uridylyl-transferase [Hirschia baltica ATCC 49814]
gi|254043970|gb|ACT60765.1| UTP-GlnB uridylyltransferase, GlnD [Hirschia baltica ATCC 49814]
Length = 943
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V ID A ++++ R G++ E V + L I+ A+ S G DVF+V
Sbjct: 840 PVVSIDKKASDNAIVLELSGRNRQGLMQEIANVFVNQGLSIQSAHAESYGMLVHDVFYV- 898
Query: 83 DLNGNKLTDESVISYIEQSLETIHYG 108
+ G + DE++++ ++ LE + G
Sbjct: 899 EAQGEDVLDEALLT--KELLEVLRRG 922
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 110 SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGS 169
S+ G T +++ DR GLL+++ ADL S+ A+V T R+ YV + G
Sbjct: 782 SDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVE-RQGH 840
Query: 170 PIEDSQQIDRIEARLRNVL 188
++ ++ IEA LR +
Sbjct: 841 AVDSPKRCAEIEAALRAAI 859
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 7 PACLDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
P+ L E K + RV IDN V T++ + + + G+L LT L L I +
Sbjct: 796 PSILSEKAKPTV---PARVEIDNEVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVS 852
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
IS+ DVF+V D+ G K+ + + I + L
Sbjct: 853 KISTKVDQVADVFYVKDIFGAKVMNPVKLEEIRKEL 888
>gi|311744097|ref|ZP_07717903.1| protein-pII uridylyltransferase [Aeromicrobium marinum DSM 15272]
gi|311313227|gb|EFQ83138.1| protein-pII uridylyltransferase [Aeromicrobium marinum DSM 15272]
Length = 738
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
PRV + TAT++ V + R G++ + + + L I+ A+IS+ G DVF+V
Sbjct: 655 PRVRLLVRARATATMIDVRATDRRGLIWQVCRTIAGLGHSIRSAHISTYGSEARDVFYVV 714
Query: 83 DLNGNKLTD---ESVISYIEQSL 102
D G++L E + + IE +L
Sbjct: 715 DETGHELGPGPAEDLRAAIEVAL 737
>gi|387814878|ref|YP_005430365.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339895|emb|CCG95942.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 881
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V N T++++ + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF +TD G+ L D V ++Q L
Sbjct: 838 KIATLGERVEDVFFITDEQGDPLRDPGVCQALQQDL 873
>gi|363807308|ref|NP_001242111.1| uncharacterized protein LOC100787003 [Glycine max]
gi|255636202|gb|ACU18442.1| unknown [Glycine max]
Length = 419
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 20 MNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFF--MD 77
+ TP V +DN++ P TL+++ + G+ + +++ D ++ + SS + F +D
Sbjct: 234 LKTPTVTVDNSLSPVHTLLQIQCVDQKGLCYDIMRISKDSDIKVAFGRFSSSVKGFRNID 293
Query: 78 VFHVTDLNGNKLTD----ESVISYIEQSL------ETIHYGRSNSFNGLTALELTGTDRV 127
+F V +G K+ D +++ S +++ + ++ G +EL+G R
Sbjct: 294 LF-VQHNDGKKIIDPESQKTLCSCLKEEMLHPLRVTIVNRGPDTELLVANPVELSGKGRP 352
Query: 128 GLLSEVFAVLADLQCSVVEAKVWTHN 153
+ +V L L+ + A+V H+
Sbjct: 353 RVFYDVTLTLKALRVGIFSAEVVRHS 378
>gi|254448782|ref|ZP_05062239.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
gi|198261623|gb|EDY85911.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
Length = 885
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 24 RVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTD 83
R+ I++ T+V+V +A R G+L Q + + + A I++ G D+F VTD
Sbjct: 798 RIHINSTSDNRFTVVEVMTADRPGLLARIGQAFIETDTRLHNAKINTIGEQVDDIFFVTD 857
Query: 84 LNGNKLTDESVISYIEQSLE 103
+ L+D +VI + Q L+
Sbjct: 858 DDNQPLSDPNVIEHFTQRLQ 877
>gi|444918465|ref|ZP_21238536.1| [Protein-PII] uridylyltransferase [Cystobacter fuscus DSM 2262]
gi|444709831|gb|ELW50829.1| [Protein-PII] uridylyltransferase [Cystobacter fuscus DSM 2262]
Length = 895
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 235 PVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
P VTV N A R ++VV+V +DR LL + LT + A ++T RA
Sbjct: 801 PRVTVDNRASRDFTVVDVLARDRVGLLHAIASALTRSGASIALAKVSTEAHRA 853
>gi|332184944|ref|ZP_08386693.1| malto-oligosyltrehalose synthase [Sphingomonas sp. S17]
gi|332014668|gb|EGI56724.1| malto-oligosyltrehalose synthase [Sphingomonas sp. S17]
Length = 798
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 114 NGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIED 173
N L +TGT+ +++ A+L + A G ++ + DC G+ +ED
Sbjct: 613 NTLAKALITGTEGQAFRADLAALLKAI-APAATANSLAQLGLRYTVPGIPDCYQGTELED 671
Query: 174 SQQIDRIEARLRNVLKGD---NDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRH 230
+D R + + +D SAKMT+ +A RR H +FA+ DY+ + V H
Sbjct: 672 LSLVDPDNRRPVDYAAREAALSDGSSAKMTL-LATLLAARRQHPALFAEGDYQPLAVTGH 730
Query: 231 STD 233
D
Sbjct: 731 GKD 733
>gi|212722976|ref|NP_001132108.1| uncharacterized protein LOC100193524 [Zea mays]
gi|413941849|gb|AFW74498.1| hypothetical protein ZEAMMB73_599986 [Zea mays]
Length = 215
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 12 EYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYIS 69
E + + R T V +DN++ TL+++ G+L + ++ + D N+ + + Y S
Sbjct: 23 EEQPISTRGGTISVTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYAS 82
Query: 70 SDGRFFMDVFHVTDLNGNKLTDE 92
+GR +D+F V +G K+ D+
Sbjct: 83 QNGRCEIDLFAVQS-DGKKILDQ 104
>gi|374620392|ref|ZP_09692926.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
gi|374303619|gb|EHQ57803.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
Length = 869
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
LT +EL+ DR GLL+ V ++AD Q S+ AK+ T R+ + ++ + G + D
Sbjct: 792 LTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLT-TDQGDRLAD-- 848
Query: 176 QIDRIEARLRN 186
D I RLR
Sbjct: 849 --DTICERLRE 857
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 125 DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARL 184
DRVGLLS++ + + + A++ T NG+ YV D +GSP+ D + ID I ++
Sbjct: 3 DRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDV-TGSPV-DPKIIDSIRRQI 60
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
+L+ V++A R G+LLE ++V+ D+++ ++ A I ++G D F+VT
Sbjct: 135 SLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYVT 181
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDG-RFFMDVFHV 81
P V+ID AT+V++ R G LL+ ++ L DL L + + ++++G R F V
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 82 TDLNGNKLTDE-------------SVISYIEQSLETIHYGRSNS---------------- 112
T NK ++ +++ Y +S E + G + S
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPKNQIDVDVATHV 126
Query: 113 ---FNGLTALELTGT-DRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA 157
G +L L T DR GLL E+ V+ D+ V A++ T G IA
Sbjct: 127 TVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTE-GLIA 174
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
L +E+ DR GL+SEV +V +L+ SV A V + +A + + G ++D Q
Sbjct: 706 LVNIEVISYDRSGLMSEVLSVFTELKMSVSTANVNVNENGVAKM------DLGIQVKDLQ 759
Query: 176 QIDRIEARLRNV 187
Q++ I ++R +
Sbjct: 760 QLEYIMTKIRRI 771
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T +E+T DR+G L + L +L +VV+A V+ + + + ++G +E+ +
Sbjct: 98 TVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPEL 157
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
++ I + N L + S+++ + A + +P + D +
Sbjct: 158 LEAIRLTIINNLIQYHPESSSQLALGAA-----------------FGLLPP-KEQVDVDI 199
Query: 237 VTVQNWADRSY--SVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAG 284
T N +D S++ V+ DR LL D+V +TD+ V +T G
Sbjct: 200 ATHINISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEG 249
>gi|153871765|ref|ZP_02000853.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
gi|152071768|gb|EDN69146.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
Length = 891
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 60 NLLIKKAYI-SSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI------------- 105
NL + AYI SD ++ + + V + +G ++T + + I QSL
Sbjct: 730 NLTVVDAYIIPSDSKYTISGYTVIEDDGTEITPKEQVEKILQSLTQALSRDETNAPFYPI 789
Query: 106 ---------HYGR-------SNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKV 149
H+ + N T +++ TDR G+LS + Q V +AK+
Sbjct: 790 NRRIPGHLKHFPELTRVTFTQDHINNHTTVQVITTDRPGVLSRIAQAFLTCQIRVKKAKI 849
Query: 150 WTHNGRIASLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGD 191
T R+ + +V D + + + S+Q+D + +L +L D
Sbjct: 850 ATFGTRVEDVFFVTDYENHA-LYSSKQLDCLRDKLSELLDED 890
>gi|114797974|ref|YP_759248.1| PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
gi|114738148|gb|ABI76273.1| protein-P-II uridylyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 947
Score = 37.7 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSP 170
+++ DR GLL EV VLAD++ S+ A V ++ R+ YVK GSP
Sbjct: 855 IDVAARDRPGLLHEVAEVLADMKLSIHSAHVGSYGERVFDAFYVK---PGSP 903
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 116 LTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQ 175
L +E+ DR GL+SEV +V +L+ SV A V + +A + + G ++D Q
Sbjct: 706 LVNIEVISYDRSGLMSEVLSVFTELKMSVSTANVNVNENGVAKM------DLGIQVKDLQ 759
Query: 176 QIDRIEARLRNV 187
Q++ I ++R +
Sbjct: 760 QLEYIMTKIRRI 771
>gi|308270950|emb|CBX27560.1| hypothetical protein N47_H23820 [uncultured Desulfobacterium sp.]
Length = 407
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 10 LDEYEKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYIS 69
LD L RM+ ++ IDN T+++V S G+L + L L IK A I+
Sbjct: 309 LDHKPPLTSRMH--KINIDNNSSSFFTIIEVFSYDFPGLLYKITNALFSCRLDIKLAKIA 366
Query: 70 SDGRFFMDVFHVTDLNGNKLTDESVISYIEQSLETI 105
+ +DVF+V D +G K+ + +S IE ++ +
Sbjct: 367 TKVDQVVDVFYVMDFDGQKVDSKERVSLIETAISEV 402
>gi|357145299|ref|XP_003573594.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 281
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V+V R G LL+ + L +L L + KA + D + F +
Sbjct: 74 TPKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAI 133
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ +
Sbjct: 134 TKSSTGRKIDDPELLEAV 151
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V+V R G LL+ + L +L L + KA + D + F +
Sbjct: 71 TPKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAI 130
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ +
Sbjct: 131 TKSSTGRKIDDPELLEAV 148
>gi|406899324|gb|EKD42627.1| hypothetical protein ACD_73C00080G0001, partial [uncultured
bacterium]
Length = 757
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
++IDN V +T++++ + R G+L + ++ L L ++ + IS+ DVF+V D+
Sbjct: 669 IMIDNDVSAYSTVIEIYTHDRLGLLYDIIRTLNHLGCYVEISKISTKVEQVSDVFYVKDI 728
Query: 85 NGNKLTDESVISYIEQSLE 103
G+K+ + I+ L+
Sbjct: 729 FGHKIMGADKLKAIKDQLK 747
>gi|215687047|dbj|BAG90893.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G++ + ++ L D N+ I + Y S +G +D+F V
Sbjct: 90 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAVQ 149
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 150 S-DGKKIVDQ 158
>gi|407646893|ref|YP_006810652.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
gi|407309777|gb|AFU03678.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
Length = 795
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 80 HVTD-LNGNKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLA 138
H TD N L D++ E+ +E + + S S L A+++ DR LLS+V VLA
Sbjct: 686 HRTDCTNAGSLQDQA-----ERIIE-VAWAPSPSSVFLVAIQIEALDRTRLLSDVTKVLA 739
Query: 139 DLQCSVVEAKVWTHNGRIA 157
D + +++ A V TH R+A
Sbjct: 740 DEKVNILSASVATHGDRVA 758
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 20/174 (11%)
Query: 113 FNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTH-NGRIASLIYVKDCNSGSPI 171
F+ T + + D LLS++ VLA ++ +AK++T +G + V D + I
Sbjct: 666 FDDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI 725
Query: 172 EDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHS 231
D + +IE L L G ++ VSM + +RL Q +F ++ H
Sbjct: 726 -DPSKYQKIENDLTKALTGYLEVNKE---VSMLKSRW-KRLEQKLFKRSGQVKVSFDNH- 779
Query: 232 TDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
Y++++V DR L+ + ++++ V+ A I+T G+
Sbjct: 780 -------------ERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGD 820
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 14 EKLVIRMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGR 73
+KL R +V DN T++ V S R G L + +++L L+I A IS+ G
Sbjct: 763 QKLFKRSGQVKVSFDN--HERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGD 820
Query: 74 FFMDVFHVTDLNGNKLT-------DESVISYIEQSL 102
+D F+V + +G K++ E +I+ IEQ L
Sbjct: 821 DIVDSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
>gi|326509743|dbj|BAJ87087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 TPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHV 81
TP+V+ID P AT+V+V R G LL+ + L +L L + KA + D + F +
Sbjct: 71 TPKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAI 130
Query: 82 TDLN-GNKLTDESVISYI 98
T + G K+ D ++ +
Sbjct: 131 TKSSTGRKIDDPELLEAV 148
>gi|325110546|ref|YP_004271614.1| (glutamate--ammonia-ligase) adenylyltransferase [Planctomyces
brasiliensis DSM 5305]
gi|324970814|gb|ADY61592.1| (Glutamate--ammonia-ligase) adenylyltransferase [Planctomyces
brasiliensis DSM 5305]
Length = 1237
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDL 84
+ IDN + +TL+ + G L E L + I++ + S D +VTD
Sbjct: 684 LTIDNGIDENSTLMDISGEDVPGFLYELTTGLALCGMQIERVIVDSTENRVADRLYVTDE 743
Query: 85 NGNKLTDESVISYIEQSLETIHY 107
NG KLTDE+ + + ++ I +
Sbjct: 744 NGEKLTDEAKLQILRAAVVLIKH 766
>gi|120555461|ref|YP_959812.1| PII uridylyl-transferase [Marinobacter aquaeolei VT8]
gi|120325310|gb|ABM19625.1| metal dependent phosphohydrolase [Marinobacter aquaeolei VT8]
Length = 881
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 17 VIRMNTPR----------VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKA 66
+I TPR V N T++++ + R G+L QVL + + + A
Sbjct: 778 IIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMELITPDRPGLLARIGQVLLEHRVRLTNA 837
Query: 67 YISSDGRFFMDVFHVTDLNGNKLTDESVISYIEQSL 102
I++ G DVF +TD G L D V ++Q L
Sbjct: 838 KIATLGERVEDVFFITDEQGEPLRDPGVCQALQQDL 873
>gi|374299916|ref|YP_005051555.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
gi|332552852|gb|EGJ49896.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio africanus str.
Walvis Bay]
Length = 940
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P V +DN T+++V +A R G L E L L L + A I + G D+F V
Sbjct: 856 PEVRVDNEASDFYTVLEVRAADRPGRLYELAMALDRLGLSVFLAKIDTMGERVADIFFVR 915
Query: 83 DLNGNKL 89
D G KL
Sbjct: 916 DGEGQKL 922
>gi|222642143|gb|EEE70275.1| hypothetical protein OsJ_30424 [Oryza sativa Japonica Group]
Length = 473
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 25 VVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIK--KAYISSDGRFFMDVFHVT 82
V +DN++ P TL+++ G++ + ++ L D N+ I + Y S +G +D+F V
Sbjct: 292 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAVQ 351
Query: 83 DLNGNKLTDE 92
+G K+ D+
Sbjct: 352 S-DGKKIVDQ 360
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 108 GRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNS 167
GR ++ +++ DRVG+L ++ + L+D +V A V T +G+ A + D
Sbjct: 676 GRPQTYP--VDIQIEAIDRVGVLKDILSRLSDQNINVRNAGVKTSSGKPALISLSID--- 730
Query: 168 GSPIEDSQQIDRIEARLRNV 187
I+D QQ+DR R++N+
Sbjct: 731 ---IQDRQQLDRTFDRIKNM 747
>gi|354605273|ref|ZP_09023262.1| hypothetical protein HMPREF9450_02177 [Alistipes indistinctus YIT
12060]
gi|353347852|gb|EHB92128.1| hypothetical protein HMPREF9450_02177 [Alistipes indistinctus YIT
12060]
Length = 759
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 101 SLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVL-ADLQCSVVEAKVWTHNGRIASL 159
+L + + + + LT LEL G DRVG+L E+ V+ +L ++ E ++ +H+G
Sbjct: 665 NLTPVAWSSHKAMSYLTILELRGIDRVGILMELSQVITGELNTNIRELRLQSHDGIFEGS 724
Query: 160 I--YVKD 164
I YVKD
Sbjct: 725 ISLYVKD 731
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 29 NAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
N VC +L+++ ++ R G+L++ V+VL D+NL + A I ++G D F +T
Sbjct: 190 NGVC---SLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFIT 240
>gi|410626422|ref|ZP_11337183.1| [protein-PII] uridylyltransferase [Glaciecola mesophila KMM 241]
gi|410153961|dbj|GAC23952.1| [protein-PII] uridylyltransferase [Glaciecola mesophila KMM 241]
Length = 870
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVW-THNGRIASLIYVKDCNSGSPIEDSQ 175
T L + G D++ L ++V +VL CS+ +A++ T++G + V + SG I+ +
Sbjct: 693 TELLVYGKDKINLFAQVASVLDSRNCSIHDAQIMKTNDGYVFDSFIVLE-QSGDRIDSAS 751
Query: 176 QIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYP 235
++ ++ + N L + + +S R++ Q+ + +R + P
Sbjct: 752 RLSSLKEAVTNQLNKPGEEHQNRRKMS-------RQMKQLDVPTK-------VRFYSSQP 797
Query: 236 VVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VT +V ++ D LL V L +ME+ + A I T GERA
Sbjct: 798 DVT----------LVELEALDAPGLLAKVGNLLVEMEFSLRMAKIATIGERA 839
>gi|109897572|ref|YP_660827.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoalteromonas atlantica
T6c]
gi|109699853|gb|ABG39773.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoalteromonas atlantica
T6c]
Length = 870
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T L + G D++ L ++V +VL CS+ +A++ N ++ SG I+ + +
Sbjct: 693 TELLVYGKDKINLFAQVASVLDSRNCSIHDAQIMKTNDGYVFDSFIVLEQSGDRIDSASR 752
Query: 177 IDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLRHSTDYPV 236
+ ++ + N L + + +S R++ Q+ + +R + P
Sbjct: 753 LSSLKEAVTNQLNKPGEEHQNRRKMS-------RQMKQLDVPTK-------VRFYSSQPD 798
Query: 237 VTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGERA 287
VT +V ++ D LL V L +ME+ + A I T GERA
Sbjct: 799 VT----------LVELEALDAPGLLAKVGNLLVEMEFSLRMAKIATIGERA 839
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 23 PRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVT 82
P+V+ID P AT+V++ R G LL+ + L +L L + KA + D + F +T
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 83 DLN-GNKLTDESVISYI 98
+ G K+ D ++ I
Sbjct: 135 KASTGRKIDDPELLEAI 151
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 126 RVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKD 164
+ GL E+ A L +L C+VV A++WTHN + ++++V +
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 119 LELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIA-SLIYVKDCNSGSPIEDSQQI 177
LEL D+VGLLSEV + + +V A+V T GR+A + YV+D G+ D + I
Sbjct: 2 LELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTR-GRMAVNTFYVRDSTGGT--VDQKTI 58
Query: 178 DRI 180
D I
Sbjct: 59 DSI 61
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 112 SFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASL-IYVKDCNSGSP 170
+ G T L + DR L +++ A L L + +A++ T + SL ++ G+
Sbjct: 702 EYAGGTQLFIYAPDRAHLFADIAATLDALNLDIQDARIMTSSASHFSLDTFIVLEQDGTS 761
Query: 171 IEDS-QQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTERRLHQMMFADRDYERMPVLR 229
I D+ ++ I+ +L ++ ND + K +S + H + +P
Sbjct: 762 IGDNPDRLFEIQHKLLLEIQNPNDTQPPKRRISRQLKHFQ---------------IPA-- 804
Query: 230 HSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLTDMEYVVFHATINTAGE 285
+TV N +VV V DR LL D+ +E + +A I+T GE
Sbjct: 805 ------EITVSNDMVNHRTVVEVVASDRPGLLADIGRCFRRLELTLLNARISTLGE 854
>gi|221133317|ref|ZP_03559622.1| UTP-GlnB uridylyltransferase, GlnD [Glaciecola sp. HTCC2999]
Length = 876
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
++N P V + ATL+++++ G+L V D NL ++ A IS+ G DV
Sbjct: 781 QLNVPTKVRFFSASDDATLIELEALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDV 840
Query: 79 FHVTDLNGNKLTDESVISYIEQ 100
F V+D + + L+ E ++ +Q
Sbjct: 841 FIVSDEHNHALSPELQLALKKQ 862
>gi|333894188|ref|YP_004468063.1| UTP-GlnB uridylyltransferase, GlnD [Alteromonas sp. SN2]
gi|332994206|gb|AEF04261.1| UTP-GlnB uridylyltransferase, GlnD [Alteromonas sp. SN2]
Length = 883
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 19 RMNTPRVVIDNAVCPTATLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDV 78
+++ P V V ATLV++++ GIL + D N+ +K A I++ G D+
Sbjct: 788 QLDVPTKVRFFGVSDEATLVELEALDAPGILAKIGHAFVDTNVTLKLAKIATIGERAEDI 847
Query: 79 FHVTDLNGNKLTDESVIS 96
F V++ G LT E +S
Sbjct: 848 FIVSNDAGKALTQEQQVS 865
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 109 RSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSG 168
R + N T LEL DR GLL+ V + + ++ AK+ T R+ + ++ D +G
Sbjct: 844 RQDPANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAG 902
Query: 169 SPIEDS 174
+P+ D+
Sbjct: 903 APLIDA 908
>gi|375337255|ref|ZP_09778599.1| protein-P-II uridylyltransferase [Succinivibrionaceae bacterium
WG-1]
Length = 870
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 92 ESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWT 151
+++++ +S I +G+S NG T + + D GL + V VL + +V+ + +
Sbjct: 666 QNILNNTNKSRPLILFGQSELMNG-TEVFIYVKDCRGLFARVTNVLGNKNLNVLSSNISN 724
Query: 152 HNGRIA--SLIYVKDCNSGSPIEDSQQIDRIEARLRNVLKGDNDIRSAKMTVSMAVTHTE 209
N A S I++ N G P+ +++ + + N L ++ + S T+
Sbjct: 725 TNDDYALDSFIFID--NHGEPVP-FERLKGLRKSIMNALMSEDYVPSKTRTIP------- 774
Query: 210 RRLHQMMFADRDYERMPVLRHSTDYPVVTVQNWADRSYSVVNVQCKDRTKLLFDVVCTLT 269
++ +H T +V D+ Y+ + + D LL +
Sbjct: 775 -------------NKLKQFKHPT---IVNFLPEKDKKYTSLEISTLDVPGLLASIATVFM 818
Query: 270 DMEYVVFHATINTAGERA 287
+ + V+ A I T GERA
Sbjct: 819 NNDLVIHAAKITTTGERA 836
>gi|350553297|ref|ZP_08922477.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
gi|349791172|gb|EGZ45062.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
Length = 898
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 117 TALELTGTDRVGLLSEVFAVLADLQCSVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQQ 176
T L +T DR GLLS + L V AK+ T ++ + Y+ D G PI D +Q
Sbjct: 825 TVLNITTVDRPGLLSCIGIALTQCGVKVYNAKIATAGEQVDDVFYITDLE-GRPITDKKQ 883
Query: 177 IDRIEARLRNVL 188
I LR L
Sbjct: 884 KSMITHTLRKSL 895
>gi|195626784|gb|ACG35222.1| amino acid binding protein [Zea mays]
Length = 443
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
T++ V+ + G+ + + + + L I + +S+DG + VF V +
Sbjct: 37 TVITVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGHWCFVVFWVVPRSSSIRIRWASL 96
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNGLTA---LELTGTDRVGLLSEVFAVLADLQC 142
N+L SY +I + S G + L+L DR GLL +V +L+DL+
Sbjct: 97 KNRLMSMCPSSY------SIPFYPDMSQPGPSQFYLLKLLSPDRKGLLHDVTHILSDLEL 150
Query: 143 SVVEAKV-WTHNGRIASLIYVKD 164
+ KV T +GR+ L ++ D
Sbjct: 151 IIHRVKVSTTPDGRVVDLFFITD 173
>gi|357134795|ref|XP_003569001.1| PREDICTED: uncharacterized protein LOC100846101 [Brachypodium
distachyon]
Length = 445
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 36 TLVKVDSARRHGILLEAVQVLTDLNLLIKKAYISSDGRFFMDVFHVTDLNG--------- 86
++V V+ + G+ + + + + L I + +S+DG++ +F V +
Sbjct: 48 SVVTVNCPDQAGLGCDLCRTILEFGLRITRGDVSTDGQWCYVIFWVVPRSPSINVRWGSL 107
Query: 87 -NKLTDESVISYIEQSLETIHYGRSNSFNGLTALELTGTDRVGLLSEVFAVLADLQCSVV 145
N+L SY I F L+L TDR GLL +V +L++L+ +
Sbjct: 108 KNRLMSMCPSSYAIPFYPEITQPAPPQF---YLLKLFSTDRKGLLHDVTHILSELELIIH 164
Query: 146 EAKV-WTHNGRIASLIYVKD 164
KV T +GR+ +L ++ D
Sbjct: 165 RVKVSTTPDGRVVNLFFITD 184
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,431,593,088
Number of Sequences: 23463169
Number of extensions: 168482080
Number of successful extensions: 386655
Number of sequences better than 100.0: 995
Number of HSP's better than 100.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 382934
Number of HSP's gapped (non-prelim): 2784
length of query: 311
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 169
effective length of database: 9,027,425,369
effective search space: 1525634887361
effective search space used: 1525634887361
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 76 (33.9 bits)