Query 021499
Match_columns 311
No_of_seqs 34 out of 36
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 05:02:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021499.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021499hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74f1 f.23.25.1 (F:1-32) Pet 36.1 16 0.0011 22.9 3.1 14 71-84 14-27 (32)
2 d1r31a1 d.58.20.1 (A:111-220) 24.4 20 0.0015 27.1 2.6 27 171-197 5-31 (110)
3 d1xvia_ c.108.1.10 (A:) Putati 15.9 42 0.003 24.0 2.6 28 266-300 188-215 (232)
4 d1nrwa_ c.108.1.10 (A:) Hypoth 15.4 31 0.0023 26.1 1.8 10 291-300 232-241 (285)
5 d1wzca1 c.108.1.10 (A:1-243) P 12.7 26 0.0019 25.6 0.6 12 290-301 198-209 (243)
6 d1c16a2 d.19.1.1 (A:1-180) Cla 12.6 63 0.0046 24.5 2.9 32 152-183 1-33 (164)
7 d1rlma_ c.108.1.10 (A:) Sugar 11.9 46 0.0033 25.0 1.8 10 291-300 209-218 (269)
8 d1l6ra_ c.108.1.10 (A:) Phosph 11.6 53 0.0038 24.3 2.1 10 291-300 170-179 (225)
9 d2caya1 b.55.1.12 (A:1-99,A:25 11.2 30 0.0022 26.5 0.5 45 98-149 42-86 (130)
10 d1t7va2 d.19.1.1 (A:5-183) Zin 11.2 84 0.0061 23.7 3.2 32 152-183 2-34 (179)
No 1
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=36.08 E-value=16 Score=22.86 Aligned_cols=14 Identities=43% Similarity=1.099 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHH
Q 021499 71 LLLVLAWGVGVFML 84 (311)
Q Consensus 71 lLLvLAWGvGilmL 84 (311)
-|.+..||+|.|+|
T Consensus 14 glifvgwglgalll 27 (32)
T d2e74f1 14 GLIFVGWGLGVLLL 27 (32)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHh
Confidence 35677999999876
No 2
>d1r31a1 d.58.20.1 (A:111-220) NAD-binding domain of HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Probab=24.45 E-value=20 Score=27.14 Aligned_cols=27 Identities=19% Similarity=0.476 Sum_probs=24.1
Q ss_pred ceeEeeecChhhHHHHHHHHHHHhhhc
Q 021499 171 ELQVQGVDNPVLLRKVIVTEAAKVIQN 197 (311)
Q Consensus 171 ~lqi~GV~np~~fRk~Vl~~~s~~~~~ 197 (311)
.||+.+|.||...|+.|+.++.++.+.
T Consensus 5 QIql~~v~d~~~a~~~i~~~k~~l~~~ 31 (110)
T d1r31a1 5 QVQIVGIQDPLNARLSLLRRKDEIIEL 31 (110)
T ss_dssp EEEEESCSCHHHHHHHHHHTHHHHHHH
T ss_pred EEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999988743
No 3
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Probab=15.93 E-value=42 Score=24.01 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=16.8
Q ss_pred hHHHHHHHHhhhccCCCcccceEEEEeeecCCCCC
Q 021499 266 SVKVCIILIKLFSFQPTESFPLYIYCVSFGDSTNP 300 (311)
Q Consensus 266 SVKriE~Lle~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (311)
.++.|-.++++....+.+ ++.|||+.|-
T Consensus 188 ~~~~l~~~~~~l~i~~~~-------~iafGD~~ND 215 (232)
T d1xvia_ 188 AANWIIATYQQLSGKRPT-------TLGLGDGPND 215 (232)
T ss_dssp HHHHHHHHHHHHHSSCCE-------EEEEESSGGG
T ss_pred HHHHHHHHHHHcCCChhc-------EEEEcCCHhH
Confidence 344555555444444443 5789999884
No 4
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=15.42 E-value=31 Score=26.08 Aligned_cols=10 Identities=40% Similarity=0.538 Sum_probs=8.7
Q ss_pred EeeecCCCCC
Q 021499 291 CVSFGDSTNP 300 (311)
Q Consensus 291 ~~~~~~~~~~ 300 (311)
|+.|||+.|-
T Consensus 232 vi~~GD~~ND 241 (285)
T d1nrwa_ 232 TAAVGDSLND 241 (285)
T ss_dssp EEEEESSGGG
T ss_pred EEEEeCCHHH
Confidence 7899999884
No 5
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=12.72 E-value=26 Score=25.58 Aligned_cols=12 Identities=33% Similarity=0.249 Sum_probs=9.2
Q ss_pred EEeeecCCCCCC
Q 021499 290 YCVSFGDSTNPK 301 (311)
Q Consensus 290 ~~~~~~~~~~~~ 301 (311)
-|+.|||+.|-.
T Consensus 198 ~~~a~GD~~ND~ 209 (243)
T d1wzca1 198 ESYAVGDSYNDF 209 (243)
T ss_dssp EEEEEECSGGGH
T ss_pred cEEEEcCCHhHH
Confidence 367899999853
No 6
>d1c16a2 d.19.1.1 (A:1-180) Class I MHC homolog {Mouse (Mus musculus), t22 [TaxId: 10090]}
Probab=12.56 E-value=63 Score=24.47 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=25.5
Q ss_pred ceeEEEEeeeecCCCCC-CCceeEeeecChhhH
Q 021499 152 GIHTFRVESIARGKAAP-VDELQVQGVDNPVLL 183 (311)
Q Consensus 152 GihslriEsig~~k~~p-~D~lqi~GV~np~~f 183 (311)
|-||||.=-.+.++|+| .-+..++|.+|-..|
T Consensus 1 GsHSL~Y~~T~vs~p~~g~P~f~~vg~vDd~qf 33 (164)
T d1c16a2 1 GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQV 33 (164)
T ss_dssp CCEEEEEEEEEECCSSSSCCEEEEEEEETTEEE
T ss_pred CCceEeEEEEEecCCCCCCcEEEEEEEECCEEE
Confidence 67999999999998876 447888888887443
No 7
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=11.86 E-value=46 Score=25.02 Aligned_cols=10 Identities=50% Similarity=0.700 Sum_probs=8.4
Q ss_pred EeeecCCCCC
Q 021499 291 CVSFGDSTNP 300 (311)
Q Consensus 291 ~~~~~~~~~~ 300 (311)
|+.||||.|-
T Consensus 209 vi~~GD~~ND 218 (269)
T d1rlma_ 209 VVAIGDSGND 218 (269)
T ss_dssp EEEEECSGGG
T ss_pred EEEEcCCcch
Confidence 6889999884
No 8
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=11.58 E-value=53 Score=24.26 Aligned_cols=10 Identities=40% Similarity=0.594 Sum_probs=8.2
Q ss_pred EeeecCCCCC
Q 021499 291 CVSFGDSTNP 300 (311)
Q Consensus 291 ~~~~~~~~~~ 300 (311)
|+.||||.|-
T Consensus 170 v~~~GDs~nD 179 (225)
T d1l6ra_ 170 ILVIGDSNND 179 (225)
T ss_dssp EEEECCSGGG
T ss_pred eeeecCCcch
Confidence 6789999874
No 9
>d2caya1 b.55.1.12 (A:1-99,A:252-282) Vacuolar protein sorting protein 36, VPS36 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.20 E-value=30 Score=26.46 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=31.8
Q ss_pred cccceeEeecCceEEEecCCccccccccccccceecCchhhhhhhhhchhhh
Q 021499 98 ISSRKLYVTPSEIVYKVSRPSFIPFWGKTTNERHVPLSLVIDVIIEQGCLQS 149 (311)
Q Consensus 98 i~SrkLyvT~~~IVYKVsRPs~~P~~Gv~r~Ek~VpL~~V~DiiieQG~Lqs 149 (311)
+.+-++|||.+-|||-=+ +. | .+.=-.+||..|.|+=++||-+-|
T Consensus 42 ~~~G~l~LTshRiI~v~~-~~--~----~~~S~slpL~~i~~~e~~~~~~~s 86 (130)
T d2caya1 42 RQRGRIFLTSQRIIYIDD-AK--P----TQNSLGLELDDLAYVNYSSGFLTR 86 (130)
T ss_dssp CSSEEEEEESSEEEEEES-SC--H----HHHCEEEEGGGEEEEEEECSSSSS
T ss_pred ccCceEEEEeeEEEEecC-CC--C----ceeEEEeEhhheeEeEEEccccCC
Confidence 578899999999997431 11 1 111246899999999888886544
No 10
>d1t7va2 d.19.1.1 (A:5-183) Zinc-alpha-2-glycoprotein, ZAG {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.19 E-value=84 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=26.7
Q ss_pred ceeEEEEeeeecCCCCC-CCceeEeeecChhhH
Q 021499 152 GIHTFRVESIARGKAAP-VDELQVQGVDNPVLL 183 (311)
Q Consensus 152 GihslriEsig~~k~~p-~D~lqi~GV~np~~f 183 (311)
|=||||--..+.++|+| .-+..++|.+|-..|
T Consensus 2 GsHsL~y~~T~~s~~~~~~p~f~~vg~vDd~qf 34 (179)
T d1t7va2 2 GRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQF 34 (179)
T ss_dssp CEEEEEEEEEEESSCCTTSCSEEEEEEETTEEE
T ss_pred CcceEEEEEEEecCCCCCCceEEEEEEECCEEE
Confidence 67999999999999877 557888998887655
Done!