Query 021501
Match_columns 311
No_of_seqs 211 out of 1648
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021501.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021501hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2.1E-78 4.6E-83 595.4 22.9 281 25-309 22-324 (454)
2 PLN02209 serine carboxypeptida 100.0 4.8E-68 1E-72 523.9 24.6 289 4-308 3-314 (437)
3 PLN03016 sinapoylglucose-malat 100.0 9.6E-68 2.1E-72 521.4 22.4 272 30-309 19-311 (433)
4 PF00450 Peptidase_S10: Serine 100.0 7.8E-68 1.7E-72 514.0 16.9 265 38-309 1-290 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.5E-60 5.4E-65 472.7 23.7 262 42-309 42-328 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 7.4E-49 1.6E-53 384.3 15.2 241 43-287 63-331 (498)
7 KOG1283 Serine carboxypeptidas 100.0 9.6E-42 2.1E-46 316.8 9.5 234 48-291 4-243 (414)
8 PLN02213 sinapoylglucose-malat 100.0 3.3E-39 7.2E-44 307.4 14.5 183 119-308 1-196 (319)
9 TIGR03611 RutD pyrimidine util 98.4 5.1E-07 1.1E-11 79.9 7.3 107 74-216 11-117 (257)
10 PRK00870 haloalkane dehalogena 98.4 4.1E-06 8.9E-11 78.2 11.8 138 31-213 8-149 (302)
11 TIGR01250 pro_imino_pep_2 prol 98.3 1.1E-06 2.4E-11 78.7 7.1 109 74-214 23-131 (288)
12 PHA02857 monoglyceride lipase; 98.3 2.9E-06 6.4E-11 77.7 9.0 125 58-216 9-134 (276)
13 TIGR03056 bchO_mg_che_rel puta 98.3 3.6E-06 7.8E-11 76.0 9.4 108 73-216 25-132 (278)
14 PRK10673 acyl-CoA esterase; Pr 98.2 3.2E-06 7E-11 75.9 7.4 104 71-212 11-114 (255)
15 TIGR01249 pro_imino_pep_1 prol 98.2 8.4E-06 1.8E-10 76.6 9.3 124 49-214 6-130 (306)
16 PF12697 Abhydrolase_6: Alpha/ 98.2 3.3E-06 7.2E-11 72.3 5.8 103 79-216 1-103 (228)
17 PLN02824 hydrolase, alpha/beta 98.1 5.9E-06 1.3E-10 76.6 6.7 106 76-214 29-137 (294)
18 PLN02385 hydrolase; alpha/beta 98.1 1.9E-05 4E-10 75.7 9.5 128 58-215 70-198 (349)
19 PRK06489 hypothetical protein; 98.1 2.8E-05 6.1E-10 75.0 10.8 115 76-213 69-188 (360)
20 PLN02298 hydrolase, alpha/beta 98.1 2.6E-05 5.7E-10 73.8 10.2 138 47-215 32-170 (330)
21 TIGR02240 PHA_depoly_arom poly 98.0 2.7E-05 5.8E-10 71.7 8.1 117 59-215 11-127 (276)
22 PRK03592 haloalkane dehalogena 97.9 2.3E-05 4.9E-10 72.7 7.2 103 76-215 27-129 (295)
23 PRK11126 2-succinyl-6-hydroxy- 97.9 2.5E-05 5.5E-10 69.7 6.5 100 76-213 2-101 (242)
24 PLN02894 hydrolase, alpha/beta 97.9 7.4E-05 1.6E-09 73.6 10.0 109 74-214 103-211 (402)
25 TIGR02427 protocat_pcaD 3-oxoa 97.9 3E-05 6.6E-10 67.6 6.2 89 74-191 11-99 (251)
26 PF10340 DUF2424: Protein of u 97.8 5E-05 1.1E-09 74.2 7.8 133 61-218 105-239 (374)
27 TIGR03695 menH_SHCHC 2-succiny 97.8 4.2E-05 9E-10 66.4 6.6 105 76-214 1-105 (251)
28 TIGR03343 biphenyl_bphD 2-hydr 97.8 9.9E-05 2.1E-09 67.4 8.9 105 75-212 29-134 (282)
29 PRK03204 haloalkane dehalogena 97.8 5.4E-05 1.2E-09 70.6 7.0 122 48-214 15-136 (286)
30 PLN02578 hydrolase 97.8 0.00011 2.4E-09 70.7 9.2 101 76-213 86-186 (354)
31 PLN02679 hydrolase, alpha/beta 97.7 0.00015 3.2E-09 70.1 8.8 104 75-213 87-190 (360)
32 PLN02652 hydrolase; alpha/beta 97.7 0.00028 6E-09 69.6 10.6 127 59-216 120-247 (395)
33 PLN03087 BODYGUARD 1 domain co 97.7 0.00031 6.7E-09 71.1 10.8 140 40-213 169-308 (481)
34 PLN02965 Probable pheophorbida 97.6 9.1E-05 2E-09 67.4 5.9 100 79-213 6-106 (255)
35 PRK10349 carboxylesterase BioH 97.6 8.3E-05 1.8E-09 67.3 5.6 94 77-212 14-107 (256)
36 COG1506 DAP2 Dipeptidyl aminop 97.6 0.00017 3.6E-09 75.1 8.1 138 52-218 368-511 (620)
37 PRK10749 lysophospholipase L2; 97.6 0.00025 5.3E-09 67.6 8.5 125 59-215 40-167 (330)
38 PRK14875 acetoin dehydrogenase 97.6 0.00029 6.2E-09 67.1 8.6 103 74-213 129-231 (371)
39 PLN02211 methyl indole-3-aceta 97.5 0.00031 6.8E-09 65.3 8.3 106 74-213 16-121 (273)
40 PLN03084 alpha/beta hydrolase 97.5 0.00025 5.4E-09 69.7 7.8 109 74-215 125-233 (383)
41 TIGR01738 bioH putative pimelo 97.5 0.00013 2.7E-09 63.5 4.9 96 76-213 4-99 (245)
42 KOG4409 Predicted hydrolase/ac 97.5 0.00031 6.7E-09 67.7 7.8 132 49-217 67-198 (365)
43 PRK05077 frsA fermentation/res 97.5 0.00044 9.6E-09 68.5 9.0 79 120-215 223-301 (414)
44 TIGR01840 esterase_phb esteras 97.4 0.00075 1.6E-08 60.1 8.4 113 73-214 10-130 (212)
45 TIGR03101 hydr2_PEP hydrolase, 97.3 0.0011 2.5E-08 62.0 8.4 130 60-220 10-140 (266)
46 PRK08775 homoserine O-acetyltr 97.2 0.0015 3.2E-08 62.5 9.1 75 118-214 98-173 (343)
47 PLN02511 hydrolase 97.2 0.0015 3.3E-08 64.0 8.8 114 72-215 96-211 (388)
48 TIGR02821 fghA_ester_D S-formy 97.1 0.0037 8E-08 58.1 10.4 42 168-217 135-176 (275)
49 PF00561 Abhydrolase_1: alpha/ 97.1 0.0006 1.3E-08 59.3 4.5 77 121-213 2-78 (230)
50 PRK05855 short chain dehydroge 97.1 0.0014 3E-08 66.1 7.8 96 59-185 12-108 (582)
51 COG0596 MhpC Predicted hydrola 97.0 0.0012 2.7E-08 56.3 5.7 103 76-214 21-123 (282)
52 PLN02980 2-oxoglutarate decarb 97.0 0.002 4.4E-08 74.0 8.5 107 73-213 1368-1479(1655)
53 PRK10566 esterase; Provisional 97.0 0.0026 5.6E-08 57.3 7.6 98 74-190 25-126 (249)
54 TIGR01607 PST-A Plasmodium sub 96.9 0.0017 3.7E-08 62.2 6.4 96 119-215 74-186 (332)
55 PRK07581 hypothetical protein; 96.9 0.0042 9.2E-08 59.0 9.1 128 59-213 25-158 (339)
56 PRK10985 putative hydrolase; P 96.9 0.0041 8.9E-08 59.1 8.9 127 60-215 42-169 (324)
57 cd00707 Pancreat_lipase_like P 96.8 0.0015 3.2E-08 61.3 4.5 112 74-213 34-146 (275)
58 COG2267 PldB Lysophospholipase 96.7 0.007 1.5E-07 57.5 8.5 126 59-217 19-145 (298)
59 KOG4178 Soluble epoxide hydrol 96.7 0.016 3.4E-07 55.6 10.5 135 46-218 21-157 (322)
60 KOG2564 Predicted acetyltransf 96.7 0.0031 6.8E-08 59.4 5.5 107 74-211 72-179 (343)
61 PRK00175 metX homoserine O-ace 96.5 0.023 5E-07 55.4 10.7 129 59-214 32-182 (379)
62 KOG1455 Lysophospholipase [Lip 96.5 0.022 4.8E-07 54.2 10.0 129 58-214 36-164 (313)
63 KOG2100 Dipeptidyl aminopeptid 96.4 0.0089 1.9E-07 63.8 7.9 153 61-237 509-665 (755)
64 KOG1515 Arylacetamide deacetyl 96.4 0.034 7.5E-07 53.9 11.2 137 58-217 70-210 (336)
65 PLN02442 S-formylglutathione h 96.4 0.017 3.8E-07 54.0 8.7 56 151-217 126-181 (283)
66 TIGR03100 hydr1_PEP hydrolase, 96.3 0.0099 2.1E-07 55.2 6.8 79 120-216 58-136 (274)
67 TIGR03230 lipo_lipase lipoprot 96.3 0.0087 1.9E-07 60.0 6.7 80 119-213 73-153 (442)
68 PF00975 Thioesterase: Thioest 95.8 0.031 6.7E-07 49.6 7.2 102 78-214 2-104 (229)
69 PLN00021 chlorophyllase 95.8 0.014 3E-07 55.9 5.1 115 73-215 49-167 (313)
70 PRK10162 acetyl esterase; Prov 95.7 0.031 6.8E-07 53.2 7.2 63 151-216 135-197 (318)
71 PF06500 DUF1100: Alpha/beta h 95.5 0.021 4.5E-07 56.7 5.3 79 120-215 219-297 (411)
72 TIGR00976 /NonD putative hydro 95.5 0.039 8.5E-07 56.6 7.4 129 59-217 6-135 (550)
73 COG3509 LpqC Poly(3-hydroxybut 95.4 0.12 2.6E-06 49.2 9.8 124 60-214 45-179 (312)
74 TIGR01392 homoserO_Ac_trn homo 95.4 0.12 2.6E-06 49.6 10.1 132 59-214 15-162 (351)
75 PF00326 Peptidase_S9: Prolyl 95.4 0.021 4.5E-07 50.5 4.5 117 120-246 15-137 (213)
76 PF10503 Esterase_phd: Esteras 95.2 0.07 1.5E-06 48.7 7.4 47 160-214 86-132 (220)
77 PRK10115 protease 2; Provision 95.2 0.11 2.3E-06 55.1 9.7 137 57-219 424-564 (686)
78 PF10230 DUF2305: Uncharacteri 94.7 0.19 4.2E-06 46.8 9.1 118 76-215 2-123 (266)
79 KOG1838 Alpha/beta hydrolase [ 94.7 0.22 4.8E-06 49.4 9.7 110 73-214 122-236 (409)
80 PF12695 Abhydrolase_5: Alpha/ 94.7 0.04 8.8E-07 44.7 3.9 94 78-214 1-95 (145)
81 KOG4391 Predicted alpha/beta h 94.5 0.27 5.9E-06 45.1 9.0 122 60-216 65-186 (300)
82 PLN02872 triacylglycerol lipas 93.8 0.5 1.1E-05 46.7 10.3 96 74-185 72-174 (395)
83 PF05577 Peptidase_S28: Serine 93.7 0.22 4.7E-06 49.4 7.7 97 120-225 60-159 (434)
84 KOG1454 Predicted hydrolase/ac 93.7 0.22 4.8E-06 47.9 7.5 96 74-195 56-152 (326)
85 PRK11460 putative hydrolase; P 93.7 0.29 6.3E-06 44.4 7.9 52 154-214 87-138 (232)
86 COG0657 Aes Esterase/lipase [L 93.6 1.3 2.8E-05 41.6 12.4 46 169-218 150-195 (312)
87 PRK11071 esterase YqiA; Provis 93.1 0.14 3E-06 45.2 4.7 47 156-216 49-95 (190)
88 PF05990 DUF900: Alpha/beta hy 92.6 0.21 4.5E-06 45.7 5.2 64 151-217 76-140 (233)
89 cd00312 Esterase_lipase Estera 92.5 0.32 6.9E-06 48.7 6.8 37 151-188 157-193 (493)
90 PF01764 Lipase_3: Lipase (cla 91.5 0.47 1E-05 38.7 5.7 61 150-214 46-106 (140)
91 PF07859 Abhydrolase_3: alpha/ 91.5 0.43 9.4E-06 41.6 5.7 45 168-216 68-112 (211)
92 PLN02454 triacylglycerol lipas 90.9 0.59 1.3E-05 46.6 6.5 65 149-214 207-271 (414)
93 cd00519 Lipase_3 Lipase (class 88.9 0.99 2.2E-05 40.5 6.0 57 152-214 112-168 (229)
94 cd00741 Lipase Lipase. Lipase 88.8 0.95 2.1E-05 38.0 5.4 43 150-195 10-52 (153)
95 PF11144 DUF2920: Protein of u 88.4 0.88 1.9E-05 45.1 5.5 61 148-216 160-221 (403)
96 PRK10252 entF enterobactin syn 87.8 2.1 4.6E-05 47.9 8.8 102 76-212 1068-1169(1296)
97 PRK05371 x-prolyl-dipeptidyl a 87.5 1.1 2.4E-05 48.2 6.0 83 119-216 279-375 (767)
98 COG4099 Predicted peptidase [G 87.2 5.7 0.00012 38.3 9.9 53 155-215 253-305 (387)
99 PF02129 Peptidase_S15: X-Pro 86.8 0.66 1.4E-05 42.9 3.5 83 120-218 58-140 (272)
100 PF00151 Lipase: Lipase; Inte 86.6 0.21 4.5E-06 48.3 0.0 103 73-194 68-173 (331)
101 KOG1552 Predicted alpha/beta h 86.3 1.4 3E-05 41.2 5.3 78 119-217 88-166 (258)
102 PLN02733 phosphatidylcholine-s 86.0 2.3 4.9E-05 42.8 7.1 39 149-190 143-181 (440)
103 PF05728 UPF0227: Uncharacteri 86.0 1.3 2.8E-05 39.3 4.8 43 169-222 57-99 (187)
104 COG0429 Predicted hydrolase of 86.0 6.9 0.00015 38.0 9.9 111 74-213 73-185 (345)
105 PF11288 DUF3089: Protein of u 85.3 1.3 2.9E-05 40.1 4.5 42 151-194 77-118 (207)
106 COG0400 Predicted esterase [Ge 85.3 3.2 7E-05 37.5 7.1 77 149-234 78-157 (207)
107 PRK06765 homoserine O-acetyltr 84.8 1.6 3.5E-05 43.1 5.3 51 151-212 143-194 (389)
108 TIGR03502 lipase_Pla1_cef extr 84.2 1.8 3.8E-05 46.7 5.6 98 76-190 449-574 (792)
109 PRK10439 enterobactin/ferric e 84.1 2.7 5.8E-05 41.9 6.6 36 171-214 288-323 (411)
110 PF06057 VirJ: Bacterial virul 83.6 2.2 4.7E-05 38.3 5.1 63 145-214 45-107 (192)
111 KOG2183 Prolylcarboxypeptidase 83.5 9.4 0.0002 38.3 9.8 64 119-186 111-182 (492)
112 smart00824 PKS_TE Thioesterase 82.1 5.2 0.00011 33.8 6.8 76 119-212 25-100 (212)
113 COG3319 Thioesterase domains o 81.7 10 0.00022 35.5 9.0 104 77-215 1-104 (257)
114 PRK13604 luxD acyl transferase 81.2 9.6 0.00021 36.6 8.8 123 59-215 19-142 (307)
115 PLN02571 triacylglycerol lipas 80.8 4.3 9.2E-05 40.6 6.5 64 150-214 206-275 (413)
116 KOG2281 Dipeptidyl aminopeptid 80.4 3.4 7.4E-05 43.4 5.7 113 75-218 641-766 (867)
117 PF03283 PAE: Pectinacetyleste 79.3 12 0.00025 36.8 9.0 127 60-196 35-181 (361)
118 KOG3975 Uncharacterized conser 79.2 2.6 5.7E-05 39.5 4.1 101 74-196 27-131 (301)
119 PF07819 PGAP1: PGAP1-like pro 78.1 23 0.00049 32.2 9.9 63 150-217 62-127 (225)
120 PF05677 DUF818: Chlamydia CHL 78.0 3.7 8E-05 40.1 4.9 92 72-186 133-230 (365)
121 PF06342 DUF1057: Alpha/beta h 76.7 13 0.00027 35.6 7.9 103 73-213 32-136 (297)
122 KOG4627 Kynurenine formamidase 76.6 1.7 3.6E-05 39.8 2.0 75 130-218 102-176 (270)
123 PF08538 DUF1749: Protein of u 74.9 10 0.00023 36.3 7.0 70 146-218 82-152 (303)
124 PRK04940 hypothetical protein; 74.1 7.6 0.00016 34.5 5.5 40 171-221 60-99 (180)
125 PF08237 PE-PPE: PE-PPE domain 73.1 10 0.00022 34.7 6.2 60 148-213 30-89 (225)
126 TIGR01836 PHA_synth_III_C poly 72.7 6.3 0.00014 37.7 5.1 52 154-216 122-173 (350)
127 PLN02753 triacylglycerol lipas 72.5 9.4 0.0002 39.3 6.4 67 148-214 287-359 (531)
128 PLN00413 triacylglycerol lipas 71.1 6.4 0.00014 40.0 4.8 39 153-194 269-307 (479)
129 PRK14566 triosephosphate isome 69.8 12 0.00026 35.1 6.0 61 148-217 188-248 (260)
130 PLN02719 triacylglycerol lipas 69.6 11 0.00025 38.5 6.3 66 149-214 274-345 (518)
131 PRK14567 triosephosphate isome 69.5 14 0.0003 34.6 6.3 61 148-217 178-238 (253)
132 PLN02324 triacylglycerol lipas 69.4 12 0.00027 37.4 6.3 65 149-214 194-265 (415)
133 COG0627 Predicted esterase [Ge 68.7 22 0.00048 34.2 7.8 110 75-192 52-173 (316)
134 PLN02408 phospholipase A1 68.3 13 0.00029 36.5 6.2 62 150-214 180-241 (365)
135 PF11187 DUF2974: Protein of u 67.9 12 0.00027 34.1 5.6 36 155-194 72-107 (224)
136 COG4782 Uncharacterized protei 67.8 9 0.00019 37.7 4.9 85 129-217 148-237 (377)
137 KOG4569 Predicted lipase [Lipi 67.1 11 0.00023 36.5 5.3 57 154-214 157-213 (336)
138 PLN02847 triacylglycerol lipas 65.6 12 0.00026 39.2 5.5 52 154-211 237-288 (633)
139 KOG3724 Negative regulator of 65.4 81 0.0018 34.4 11.6 37 148-184 153-195 (973)
140 PLN02802 triacylglycerol lipas 65.1 14 0.0003 37.9 5.8 62 150-214 310-371 (509)
141 PLN02162 triacylglycerol lipas 63.8 12 0.00026 38.0 5.1 39 153-194 263-301 (475)
142 PLN02934 triacylglycerol lipas 63.3 10 0.00022 38.9 4.5 39 153-194 306-344 (515)
143 PF06259 Abhydrolase_8: Alpha/ 63.3 15 0.00033 32.4 5.1 40 149-191 89-129 (177)
144 COG2272 PnbA Carboxylesterase 62.7 19 0.00041 36.7 6.2 33 155-188 165-197 (491)
145 PLN02310 triacylglycerol lipas 61.1 19 0.00041 36.0 5.9 61 151-214 188-249 (405)
146 PLN02761 lipase class 3 family 60.4 21 0.00046 36.8 6.2 66 149-214 269-342 (527)
147 PF05057 DUF676: Putative seri 60.3 16 0.00034 32.8 4.8 47 148-195 56-102 (217)
148 PF07519 Tannase: Tannase and 59.5 24 0.00052 35.9 6.4 79 156-246 104-191 (474)
149 PF02230 Abhydrolase_2: Phosph 58.1 10 0.00022 33.6 3.2 72 151-232 87-164 (216)
150 TIGR01838 PHA_synth_I poly(R)- 58.0 40 0.00087 34.8 7.8 85 120-217 221-305 (532)
151 COG3208 GrsT Predicted thioest 57.6 17 0.00037 33.8 4.5 64 121-195 35-98 (244)
152 KOG2984 Predicted hydrolase [G 57.5 15 0.00034 33.6 4.1 91 77-193 43-136 (277)
153 COG4757 Predicted alpha/beta h 56.8 15 0.00033 34.3 4.0 65 121-189 59-123 (281)
154 PLN02429 triosephosphate isome 56.0 30 0.00064 33.5 6.1 61 148-217 238-299 (315)
155 PLN02561 triosephosphate isome 53.6 35 0.00076 31.8 6.0 60 148-216 179-239 (253)
156 PF08840 BAAT_C: BAAT / Acyl-C 53.4 16 0.00034 32.8 3.6 35 159-193 10-44 (213)
157 PF00681 Plectin: Plectin repe 53.0 14 0.0003 24.9 2.4 33 211-243 11-43 (45)
158 PLN03037 lipase class 3 family 52.2 28 0.00062 35.8 5.5 44 152-195 298-342 (525)
159 KOG3079 Uridylate kinase/adeny 50.7 8.7 0.00019 34.4 1.4 16 74-89 5-20 (195)
160 PF12740 Chlorophyllase2: Chlo 50.3 30 0.00064 32.5 5.0 40 172-214 92-131 (259)
161 PF05448 AXE1: Acetyl xylan es 50.0 37 0.0008 32.6 5.8 47 160-215 164-210 (320)
162 PF03403 PAF-AH_p_II: Platelet 48.1 17 0.00037 35.7 3.2 37 172-217 229-265 (379)
163 PRK07868 acyl-CoA synthetase; 47.9 73 0.0016 35.3 8.3 40 170-216 140-179 (994)
164 KOG2182 Hydrolytic enzymes of 47.8 52 0.0011 33.8 6.5 64 120-184 119-185 (514)
165 PF06821 Ser_hydrolase: Serine 44.8 23 0.0005 30.7 3.2 39 170-215 54-92 (171)
166 PF05576 Peptidase_S37: PS-10 44.7 74 0.0016 32.1 6.9 60 119-184 88-147 (448)
167 PRK14565 triosephosphate isome 44.6 50 0.0011 30.5 5.5 54 147-217 172-225 (237)
168 PF00756 Esterase: Putative es 43.9 12 0.00027 33.3 1.4 37 173-217 117-153 (251)
169 PRK00042 tpiA triosephosphate 43.7 76 0.0016 29.5 6.6 60 148-217 179-239 (250)
170 PF10081 Abhydrolase_9: Alpha/ 43.2 35 0.00076 32.5 4.3 36 148-183 86-121 (289)
171 COG2945 Predicted hydrolase of 42.9 27 0.00059 31.6 3.3 58 129-194 69-126 (210)
172 PF03583 LIP: Secretory lipase 41.8 80 0.0017 29.7 6.6 92 121-217 15-116 (290)
173 PF02450 LCAT: Lecithin:choles 41.2 32 0.00069 33.9 3.9 38 151-192 103-140 (389)
174 cd00311 TIM Triosephosphate is 39.7 94 0.002 28.7 6.5 59 149-217 176-235 (242)
175 PF12146 Hydrolase_4: Putative 39.0 71 0.0015 24.0 4.7 77 60-158 2-78 (79)
176 KOG2541 Palmitoyl protein thio 38.2 79 0.0017 30.1 5.7 90 73-195 21-112 (296)
177 KOG1516 Carboxylesterase and r 36.3 1.2E+02 0.0026 30.8 7.3 33 155-188 180-212 (545)
178 KOG3967 Uncharacterized conser 36.2 1.6E+02 0.0034 27.4 7.2 83 119-213 131-226 (297)
179 KOG2382 Predicted alpha/beta h 36.0 48 0.001 32.0 4.1 53 121-182 82-134 (315)
180 TIGR03712 acc_sec_asp2 accesso 35.2 39 0.00084 34.6 3.4 113 61-216 277-392 (511)
181 KOG2565 Predicted hydrolases o 34.7 49 0.0011 33.0 3.9 97 79-194 155-252 (469)
182 PF06028 DUF915: Alpha/beta hy 33.6 1.3E+02 0.0028 28.1 6.4 59 148-212 83-142 (255)
183 KOG1553 Predicted alpha/beta h 33.3 91 0.002 30.9 5.4 54 145-211 289-342 (517)
184 PRK13962 bifunctional phosphog 33.1 85 0.0019 33.3 5.7 61 148-217 574-635 (645)
185 KOG2369 Lecithin:cholesterol a 32.7 42 0.00091 34.1 3.2 43 150-192 160-203 (473)
186 COG3545 Predicted esterase of 32.2 54 0.0012 29.1 3.5 36 170-213 58-93 (181)
187 PF01083 Cutinase: Cutinase; 31.8 1.2E+02 0.0026 26.4 5.7 64 147-215 60-124 (179)
188 PF05277 DUF726: Protein of un 29.6 1.7E+02 0.0036 28.7 6.7 43 169-213 218-260 (345)
189 PRK15492 triosephosphate isome 29.1 1.3E+02 0.0028 28.2 5.6 60 148-217 188-248 (260)
190 PRK06762 hypothetical protein; 29.0 34 0.00073 28.7 1.6 13 77-89 2-14 (166)
191 PF01738 DLH: Dienelactone hyd 28.9 45 0.00097 29.2 2.5 33 157-189 84-116 (218)
192 COG2819 Predicted hydrolase of 28.2 72 0.0016 30.0 3.8 56 151-214 113-172 (264)
193 COG4425 Predicted membrane pro 27.9 81 0.0018 32.2 4.2 36 148-183 374-409 (588)
194 PTZ00333 triosephosphate isome 27.6 1.4E+02 0.003 27.9 5.5 59 148-215 182-241 (255)
195 PF00121 TIM: Triosephosphate 27.0 28 0.0006 32.2 0.8 61 148-217 177-238 (244)
196 PLN02517 phosphatidylcholine-s 26.5 68 0.0015 33.9 3.5 21 170-190 212-232 (642)
197 COG3571 Predicted hydrolase of 25.9 79 0.0017 28.1 3.3 28 167-194 85-112 (213)
198 PF05049 IIGP: Interferon-indu 25.0 38 0.00082 33.5 1.3 56 75-132 33-97 (376)
199 COG1075 LipA Predicted acetylt 24.5 1.1E+02 0.0024 29.4 4.5 44 147-193 106-149 (336)
200 PF01583 APS_kinase: Adenylyls 24.4 45 0.00098 28.8 1.6 14 76-89 1-14 (156)
201 PF06309 Torsin: Torsin; Inte 24.3 63 0.0014 27.1 2.4 17 73-89 49-65 (127)
202 KOG2551 Phospholipase/carboxyh 23.9 2.1E+02 0.0045 26.5 5.8 58 155-216 92-149 (230)
203 PF09292 Neil1-DNA_bind: Endon 23.6 48 0.001 21.9 1.2 12 76-87 24-35 (39)
204 COG0412 Dienelactone hydrolase 23.1 1.6E+02 0.0035 26.8 5.1 41 149-190 91-131 (236)
205 PF15613 WHIM2: WSTF, HB1, Itc 23.0 1.5E+02 0.0033 19.5 3.5 27 61-87 12-38 (38)
206 PF03959 FSH1: Serine hydrolas 22.2 1.4E+02 0.003 26.5 4.3 63 151-217 86-148 (212)
207 TIGR00419 tim triosephosphate 22.1 2.1E+02 0.0045 25.8 5.5 54 149-216 151-204 (205)
208 PF06414 Zeta_toxin: Zeta toxi 20.7 58 0.0013 28.5 1.6 17 73-89 11-27 (199)
209 PF15169 DUF4564: Domain of un 20.5 90 0.0019 27.9 2.7 41 122-166 125-165 (187)
210 PF07224 Chlorophyllase: Chlor 20.0 97 0.0021 29.6 2.9 22 171-192 120-141 (307)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-78 Score=595.37 Aligned_cols=281 Identities=46% Similarity=0.825 Sum_probs=247.7
Q ss_pred hhhcccccccccCCCCC-CCCceeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCc
Q 021501 25 EAYASLLDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFR 103 (311)
Q Consensus 25 ~~~~~~~~~v~~Lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~ 103 (311)
+..++ +++|++|||++ +++|++|||||+|++..+++|||||+||+.+|+++||||||||||||||+ .|+|.|+|||+
T Consensus 22 ~~~~~-~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-~G~~~E~GPf~ 99 (454)
T KOG1282|consen 22 HHVDE-ADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-GGLFEENGPFR 99 (454)
T ss_pred cccch-hhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-hhhhhhcCCeE
Confidence 35555 89999999999 69999999999999988999999999999999999999999999999999 69999999999
Q ss_pred CCC--CcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeecc
Q 021501 104 PNG--QVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYA 181 (311)
Q Consensus 104 ~~~--~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg 181 (311)
++. .+|..||||||+.|||||+||||||||||+++.+++ .++|+.+|+|+++||++||++||||++|||||+|||||
T Consensus 100 v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~-~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYA 178 (454)
T KOG1282|consen 100 VKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDY-KTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYA 178 (454)
T ss_pred EcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcC-cCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccc
Confidence 954 479999999999999999999999999999888777 47899999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhccc--cceeeeeeeEeeCcccCccccccchhhhhhhcCCCCHHHHHHHHHhccchhhhhhhhCCCC
Q 021501 182 GHYIPQLADLMLEFNKK--EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSV 259 (311)
Q Consensus 182 G~yvP~lA~~i~~~n~~--~~~inLkGi~Igng~~d~~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~~~~ 259 (311)
|||||+||++|+++|+. ...|||||++||||++|+..|.+++.+|+|+||+|++++++.+++.|+.... .-......
T Consensus 179 G~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~-~~~~~~~~ 257 (454)
T KOG1282|consen 179 GHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSD-NYANVDPS 257 (454)
T ss_pred ceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcc-cccccCCc
Confidence 99999999999999974 3469999999999999999999999999999999999999999999987432 00111234
Q ss_pred chHHHHHHHHHHHHhcCCCCccccCCCCCCCc---------------c--cccccccChhhhhhhhc
Q 021501 260 SPICSRVMSLVSRETSRFVDKYDVTLDVCISS---------------V--LSQSKVLTPKVTTLLIN 309 (311)
Q Consensus 260 ~~~C~~a~~~~~~~~~~~in~Ydi~~~~c~~~---------------~--~~~~~~~~~~~~~~~~~ 309 (311)
+..|..+++.......+.++.|+|+.++|.+. + ...+++++.++||+.+.
T Consensus 258 ~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh 324 (454)
T KOG1282|consen 258 NTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALH 324 (454)
T ss_pred hhHHHHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhC
Confidence 67999999998845544799999999999841 1 12255888888887653
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.8e-68 Score=523.87 Aligned_cols=289 Identities=30% Similarity=0.582 Sum_probs=235.0
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhcccccccccCCCCC-CCCceeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEE
Q 021501 4 LPLKLVAFAGILIHICLRIQVEAYASLLDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWL 82 (311)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWl 82 (311)
+++|||++ +++..+ . +.++ .|+|++|||+. +++++++|||++|++..++++||||+|++.+|+++|++|||
T Consensus 3 ~~~~~~~~--~~~~~~--~---~~~~-~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWl 74 (437)
T PLN02209 3 LILKFMLL--ILLVSS--H---HVRS-GSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWL 74 (437)
T ss_pred HHHHHHHH--HHHHhc--c---cCCc-cCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEE
Confidence 56666655 333222 1 3334 78999999996 79999999999999877889999999999999999999999
Q ss_pred cCCCChhhhhhhcccCCCCCcCCCC-------cccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 83 NGGPGCSSLGVGAFSENGPFRPNGQ-------VLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 83 nGGPG~SS~~~g~~~e~GP~~~~~~-------~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
||||||||+ .|+|.|+|||+++.+ ++++||+||++.|||||||||+||||||+.....+ .+++++|++++
T Consensus 75 nGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~~~~~a~~~~ 151 (437)
T PLN02209 75 NGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER--TSDTSEVKKIH 151 (437)
T ss_pred CCCCcHHHh-hhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHH
Confidence 999999999 899999999998532 68899999999999999999999999998665443 35667789999
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc--cceeeeeeeEeeCcccCccccccchhhhhhhcCCC
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK--EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLI 233 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~--~~~inLkGi~Igng~~d~~~~~~~~~~~~~~~glI 233 (311)
+||+.||++||+|+++|+||+||||||||||.+|.+|+++|++ ...||||||+||||++||..|..++.+|+|.||+|
T Consensus 152 ~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI 231 (437)
T PLN02209 152 EFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLI 231 (437)
T ss_pred HHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCC
Confidence 9999999999999999999999999999999999999998753 23699999999999999999999999999999999
Q ss_pred CHHHHHHHHHhccchhhhhhhhCCCCchHHHHHHHHHHHHhcCCCCccccCCCCCCCcc-------------cccccccC
Q 021501 234 SDATYTMFTSFCNYSRYVSEYYRGSVSPICSRVMSLVSRETSRFVDKYDVTLDVCISSV-------------LSQSKVLT 300 (311)
Q Consensus 234 ~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~a~~~~~~~~~~~in~Ydi~~~~c~~~~-------------~~~~~~~~ 300 (311)
++++++++++.|... +.. ..+.+..|..++..+.... +.+|.|++..+.|.... .....+++
T Consensus 232 ~~~~~~~~~~~c~~~-~~~---~~~~~~~C~~~i~~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN 306 (437)
T PLN02209 232 SDELYESLKRICKGN-YFS---VDPSNKKCLKLVEEYHKCT-DNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWAN 306 (437)
T ss_pred CHHHHHHHHHhcccc-ccc---CCCChHHHHHHHHHHHHHh-hcCCccccccccccccccccCCCCcccccHHHHHHHhC
Confidence 999999999999641 110 1234578988877654444 34777765555554321 11244666
Q ss_pred hhhhhhhh
Q 021501 301 PKVTTLLI 308 (311)
Q Consensus 301 ~~~~~~~~ 308 (311)
.++|++.|
T Consensus 307 ~~~V~~aL 314 (437)
T PLN02209 307 NESVREAL 314 (437)
T ss_pred CHHHHHHh
Confidence 67777655
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=9.6e-68 Score=521.44 Aligned_cols=272 Identities=32% Similarity=0.592 Sum_probs=231.0
Q ss_pred cccccccCCCCC-CCCceeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCC---
Q 021501 30 LLDRITALPGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPN--- 105 (311)
Q Consensus 30 ~~~~v~~Lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~--- 105 (311)
+.+.|++|||+. +++++++|||++|+++.++++||||+|++.+|+++|+||||||||||||+ .|+|.|+|||+++
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 478999999986 78999999999998877789999999999999999999999999999999 8999999999873
Q ss_pred --C--CcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeecc
Q 021501 106 --G--QVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYA 181 (311)
Q Consensus 106 --~--~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYg 181 (311)
+ .++++|++||++.|||||||||+||||||+.....+ .+|.++|+++++||++||++||+|+++|+||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 2 268899999999999999999999999998665443 3566778999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhccc--cceeeeeeeEeeCcccCccccccchhhhhhhcCCCCHHHHHHHHHhccchhhhhhhhCCCC
Q 021501 182 GHYIPQLADLMLEFNKK--EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSV 259 (311)
Q Consensus 182 G~yvP~lA~~i~~~n~~--~~~inLkGi~Igng~~d~~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~~~~ 259 (311)
|||||.+|++|+++|++ ...||||||+||||++||..|..++.+|+|+||+|++++++.+++.|...... ....
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~----~~~~ 251 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN----VDPS 251 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhcccccc----CCCc
Confidence 99999999999998863 24699999999999999999999999999999999999999999999742110 1134
Q ss_pred chHHHHHHHHHHHHhcCCCCccccCCCCCCCc------c-----cccccccChhhhhhhhc
Q 021501 260 SPICSRVMSLVSRETSRFVDKYDVTLDVCISS------V-----LSQSKVLTPKVTTLLIN 309 (311)
Q Consensus 260 ~~~C~~a~~~~~~~~~~~in~Ydi~~~~c~~~------~-----~~~~~~~~~~~~~~~~~ 309 (311)
...|..+........ +.+|+|||+.++|... + .....+++.++|++.+.
T Consensus 252 ~~~C~~~~~~~~~~~-~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~ 311 (433)
T PLN03016 252 NTQCLKLTEEYHKCT-AKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALH 311 (433)
T ss_pred hHHHHHHHHHHHHHh-cCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhC
Confidence 568998887765554 4689999987767432 1 11245677777777653
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=7.8e-68 Score=514.05 Aligned_cols=265 Identities=41% Similarity=0.762 Sum_probs=216.0
Q ss_pred CCCC-CCCceeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCC--C-Ccccccc
Q 021501 38 PGQP-QVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPN--G-QVLVRNE 113 (311)
Q Consensus 38 pg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~--~-~~l~~n~ 113 (311)
||+. ++++++|||||+|+++.+++|||||+|++.+|+++||||||||||||||| .|+|.|+|||+++ + .++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 7877 78999999999999878899999999999999999999999999999999 8999999999997 3 3799999
Q ss_pred cCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHH
Q 021501 114 YSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLML 193 (311)
Q Consensus 114 ~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 193 (311)
+||++.||||||||||||||||+.....+ ..+++++|+++++||++||++||+|+++|+||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDY-VWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGG-S-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccc-cchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 99999999999999999999999776554 46889999999999999999999999999999999999999999999999
Q ss_pred Hhcccc--ceeeeeeeEeeCcccCccccccchhhhhhhcCCCCHHHHHHHHHhccchhhhhhhhCCCCchHHHHHHHHHH
Q 021501 194 EFNKKE--ELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSVSPICSRVMSLVS 271 (311)
Q Consensus 194 ~~n~~~--~~inLkGi~Igng~~d~~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~a~~~~~ 271 (311)
+++.+. ..||||||+||||++||..|..++.+|+|+||+|++++++.+.+.|... ..+ ......|.++.+.+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~---~~~--~~~~~~c~~~~~~~~ 233 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC---PQC--QKAITECAAALDELS 233 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS---HSS--SCCHHHHHHHHHHHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc---ccc--cchhhHHHHHHHhhh
Confidence 998653 3699999999999999999999999999999999999999999998642 111 134678988888776
Q ss_pred HH-----hcCCCCccccCCCCCC--------------CcccccccccChhhhhhhhc
Q 021501 272 RE-----TSRFVDKYDVTLDVCI--------------SSVLSQSKVLTPKVTTLLIN 309 (311)
Q Consensus 272 ~~-----~~~~in~Ydi~~~~c~--------------~~~~~~~~~~~~~~~~~~~~ 309 (311)
.. ....+|+|||+.++|. ........+++.++|++.++
T Consensus 234 ~~~~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~ 290 (415)
T PF00450_consen 234 CQYAISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALH 290 (415)
T ss_dssp HHCHHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT
T ss_pred hhcccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhC
Confidence 53 1247999999988642 12234455667777777664
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.5e-60 Score=472.70 Aligned_cols=262 Identities=29% Similarity=0.563 Sum_probs=216.2
Q ss_pred CCCceeEEEEEEecC-CCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCC--cccccccCccc
Q 021501 42 QVGFQQYSGYVTVDE-KKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQ--VLVRNEYSWNR 118 (311)
Q Consensus 42 ~~~~~~~sGyl~v~~-~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~--~l~~n~~sW~~ 118 (311)
+.++++|||||+|++ ..++++||||+|++.+|+++|++|||||||||||+ .|+|.|+|||+++.+ +++.|++||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 567889999999975 45789999999999999999999999999999999 899999999999654 78999999999
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 198 (311)
.+||||||||+||||||+... ++ ..++++.|+|+++||+.||++||+++.+|+||+||||||+|+|.+|.+|+++|++
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~-~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DY-DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CC-CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998653 34 3567889999999999999999999999999999999999999999999998865
Q ss_pred c--ceeeeeeeEeeCcccCccccccchhhhhhh-------cCCCCHHHHHHHHH---hccchhhhhhhhC--CCCchHHH
Q 021501 199 E--ELFNLKGIALGNPVLEFATDFNSRAEFFWS-------HGLISDATYTMFTS---FCNYSRYVSEYYR--GSVSPICS 264 (311)
Q Consensus 199 ~--~~inLkGi~Igng~~d~~~~~~~~~~~~~~-------~glI~~~~~~~~~~---~C~~~~~~~~~~~--~~~~~~C~ 264 (311)
+ .+||||||+|||||+||..|+.++.+|+|+ +|+|++++++.+.+ .|. +.+..|.. ......|.
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~--~~~~~c~~~~~~~~~~c~ 276 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQ--KKIKECNSNPDDADSSCS 276 (462)
T ss_pred cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHH--HHHHhccccCCCcchHHH
Confidence 3 469999999999999999999999999996 58999999988875 453 22333321 11234676
Q ss_pred HHHHHHHHHh----cCCCCccccCCCC----CCCcccccccccChhhhhhhhc
Q 021501 265 RVMSLVSRET----SRFVDKYDVTLDV----CISSVLSQSKVLTPKVTTLLIN 309 (311)
Q Consensus 265 ~a~~~~~~~~----~~~in~Ydi~~~~----c~~~~~~~~~~~~~~~~~~~~~ 309 (311)
.+...|.+.. ..++|+||||.+| |++. ..-..+++.++|++.+.
T Consensus 277 ~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~-~~~~~yLN~~~Vq~AL~ 328 (462)
T PTZ00472 277 VARALCNEYIAVYSATGLNNYDIRKPCIGPLCYNM-DNTIAFMNREDVQSSLG 328 (462)
T ss_pred HHHHHHHHHHHHHHhcCCChhheeccCCCCCccCH-HHHHHHhCCHHHHHHhC
Confidence 6655553321 2358999999752 4432 23566888888887663
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-49 Score=384.35 Aligned_cols=241 Identities=29% Similarity=0.545 Sum_probs=188.7
Q ss_pred CCceeEEEEEEecCCCC-----ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCC-cccc--ccc
Q 021501 43 VGFQQYSGYVTVDEKKQ-----RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQ-VLVR--NEY 114 (311)
Q Consensus 43 ~~~~~~sGyl~v~~~~~-----~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~-~l~~--n~~ 114 (311)
+.+..+.|.++|+...+ ..+|||+++++++|.++|+||||||||||||+ .|+|.|+||++|+.+ +... ||+
T Consensus 63 ~~~~~~~G~lpv~~~~g~~d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~ 141 (498)
T COG2939 63 LSYPATAGILPVRDYTGYPDAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPG 141 (498)
T ss_pred CCcchhccccchhhccCCcccceeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCcc
Confidence 33445566666543322 13889999999999999999999999999999 899999999999665 5444 999
Q ss_pred CcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCC--CeEEEeeeccccchHHHHHHH
Q 021501 115 SWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNR--SLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 115 sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~lA~~i 192 (311)
||++++||||||||+|||||++... .. ..+-....+|+..|++.||+.||++.+. |+||+||||||+|+|.+|.+|
T Consensus 142 SW~~~adLvFiDqPvGTGfS~a~~~-e~-~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 142 SWLDFADLVFIDQPVGTGFSRALGD-EK-KKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred ccccCCceEEEecCcccCccccccc-cc-ccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 9999999999999999999997322 22 2344566789999999999999999888 999999999999999999999
Q ss_pred HHhcccc-ceeeeeeeEeeCc-ccCccccccchhhhhhh----cCCCCHHHHHHHHHhccchhhhhhhhCC----CCchH
Q 021501 193 LEFNKKE-ELFNLKGIALGNP-VLEFATDFNSRAEFFWS----HGLISDATYTMFTSFCNYSRYVSEYYRG----SVSPI 262 (311)
Q Consensus 193 ~~~n~~~-~~inLkGi~Igng-~~d~~~~~~~~~~~~~~----~glI~~~~~~~~~~~C~~~~~~~~~~~~----~~~~~ 262 (311)
+++|... ..+||++++|||| ++||.+++..+..++.. ++..+.+.++++.+.|+.. +.....++ .....
T Consensus 220 ~~~~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d-~~~~l~~g~~~~~~~~~ 298 (498)
T COG2939 220 LEDNIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGD-YCLALMKGCYDSGSLQP 298 (498)
T ss_pred HHhccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhh-hHhhhccCCCCchhhhH
Confidence 9986322 2599999999999 99999999888888874 4566777788888888752 22222222 23457
Q ss_pred HHHHHHHHHHHh-----c---CCCCccccCCCC
Q 021501 263 CSRVMSLVSRET-----S---RFVDKYDVTLDV 287 (311)
Q Consensus 263 C~~a~~~~~~~~-----~---~~in~Ydi~~~~ 287 (311)
|..+...|.... . +..|+||++..|
T Consensus 299 c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~ 331 (498)
T COG2939 299 CENASAYLTGLMREYVGRAGGRLLNVYDIREEC 331 (498)
T ss_pred HHHHHHHHHhcchhhhccccccccccccchhhc
Confidence 877777665322 1 238999999643
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.6e-42 Score=316.83 Aligned_cols=234 Identities=26% Similarity=0.422 Sum_probs=192.4
Q ss_pred EEEEEEecCCCCceEEEEEeecCCCC-CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhc
Q 021501 48 YSGYVTVDEKKQRALFYYFAEAETDP-ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLE 126 (311)
Q Consensus 48 ~sGyl~v~~~~~~~lfy~f~e~~~~p-~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiD 126 (311)
-.||++++. +.++|||++.+..+. ..+|+.+|++||||+||.++|+|.|.||...+ +.+|+.+|.+.|+|||||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~---~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD---GSPRDWTWLKDADLLFVD 78 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC---CCcCCchhhhhccEEEec
Confidence 369999985 589999999887543 78999999999999999999999999999876 567999999999999999
Q ss_pred cccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc-ceeeee
Q 021501 127 TPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE-ELFNLK 205 (311)
Q Consensus 127 qPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~-~~inLk 205 (311)
.|||+||||.+..+.| ++++++.|.|+.+.|++||..||||+.+|+||+-|||||+.++.+|..+.+.-+++ .+.|+.
T Consensus 79 nPVGaGfSyVdg~~~Y-~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAY-TTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred CCCcCceeeecCcccc-cccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 9999999999887777 68899999999999999999999999999999999999999999999998877665 368999
Q ss_pred eeEeeCcccCccccccchhhhhhhcCCCCHHHHHHH---HHhccchhhhh-hhhCCCCchHHHHHHHHHHHHhcCCCCcc
Q 021501 206 GIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMF---TSFCNYSRYVS-EYYRGSVSPICSRVMSLVSRETSRFVDKY 281 (311)
Q Consensus 206 Gi~Igng~~d~~~~~~~~~~~~~~~glI~~~~~~~~---~~~C~~~~~~~-~~~~~~~~~~C~~a~~~~~~~~~~~in~Y 281 (311)
|+++|++||+|..-..+..+|++..+.+++...+.. .++|.. .+. .-+ ...+.|..-.+.....-++++|.|
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~--~v~~g~~--~~AT~~Wg~~e~li~~~sn~VdfY 233 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKG--GVDGGKW--GGATGGWGGGENLISRESNGVDFY 233 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcc--cccCCcc--ccccccccCcCcceeecccCccee
Confidence 999999999999999999999999999998876543 344542 111 001 123345433333333234579999
Q ss_pred ccCCCCCCCc
Q 021501 282 DVTLDVCISS 291 (311)
Q Consensus 282 di~~~~c~~~ 291 (311)
||..+.-.+.
T Consensus 234 Nil~~t~~d~ 243 (414)
T KOG1283|consen 234 NILTKTLGDQ 243 (414)
T ss_pred eeeccCCCcc
Confidence 9997654443
No 8
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.3e-39 Score=307.43 Aligned_cols=183 Identities=28% Similarity=0.465 Sum_probs=147.7
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 198 (311)
.|||||||||+||||||+.+...+ .+|+++|++++.||+.||++||+|+++||||+||||||||||.+|++|+++|++
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 489999999999999998665443 456677899999999999999999999999999999999999999999998753
Q ss_pred --cceeeeeeeEeeCcccCccccccchhhhhhhcCCCCHHHHHHHHHhccchhhhhhhhCCCCchHHHHHHHHHHHHhcC
Q 021501 199 --EELFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDATYTMFTSFCNYSRYVSEYYRGSVSPICSRVMSLVSRETSR 276 (311)
Q Consensus 199 --~~~inLkGi~Igng~~d~~~~~~~~~~~~~~~glI~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~a~~~~~~~~~~ 276 (311)
..+||||||+|||||++|..+..++.+|+|.||+|++++++.+.+.|...... + ......|.++........+
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~--~--~~~~~~c~~~~~~~~~~~~- 153 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYN--V--DPSNTQCLKLTEEYHKCTA- 153 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccC--C--CCCcHHHHHHHHHHHHHHh-
Confidence 23699999999999999999999999999999999999999999999742110 1 1235689988876654443
Q ss_pred CCCccccCCCCCCCc----------c-cccccccChhhhhhhh
Q 021501 277 FVDKYDVTLDVCISS----------V-LSQSKVLTPKVTTLLI 308 (311)
Q Consensus 277 ~in~Ydi~~~~c~~~----------~-~~~~~~~~~~~~~~~~ 308 (311)
.+|+||++.++|... . .....+++.++|++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL 196 (319)
T PLN02213 154 KINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREAL 196 (319)
T ss_pred cCCHhhcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHh
Confidence 589999986656431 1 1235567777777665
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.44 E-value=5.1e-07 Score=79.87 Aligned_cols=107 Identities=21% Similarity=0.189 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
++.|+||+++|.+|.+..+.... + -+.+..+++-+|.| |.|.|.......+ +-++.+++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~-~----------------~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~~ 69 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQL-D----------------VLTQRFHVVTYDHR-GTGRSPGELPPGY---SIAHMADD 69 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHH-H----------------HHHhccEEEEEcCC-CCCCCCCCCcccC---CHHHHHHH
Confidence 46799999999988776632111 0 12234689999988 9999864332222 34455666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+.+++.. .+..+++++|+|+||..+..+|....+ .++++++.+++.++
T Consensus 70 ~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 70 VLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCC
Confidence 6666653 234679999999999988888764332 27788887776543
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.36 E-value=4.1e-06 Score=78.20 Aligned_cols=138 Identities=19% Similarity=0.223 Sum_probs=84.7
Q ss_pred ccccccCCCCCCCCceeEEEEEEecCCCCc--eEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCc
Q 021501 31 LDRITALPGQPQVGFQQYSGYVTVDEKKQR--ALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQV 108 (311)
Q Consensus 31 ~~~v~~Lpg~~~~~~~~~sGyl~v~~~~~~--~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~ 108 (311)
..++.+||.++ ..-.|+.+++..+. .++|. +. .++ +.|.||+++|.|+.+..|.... |
T Consensus 8 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~--~~-G~~-~~~~lvliHG~~~~~~~w~~~~----~------- 67 (302)
T PRK00870 8 DSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYV--DE-GPA-DGPPVLLLHGEPSWSYLYRKMI----P------- 67 (302)
T ss_pred cccccCCcCCC-----CCceeEeecCCCCceEEEEEE--ec-CCC-CCCEEEEECCCCCchhhHHHHH----H-------
Confidence 45677888665 23467888764444 45554 22 233 4688999999988777642111 0
Q ss_pred ccccccCcc-cccchhhhccccccccccccCC-CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchH
Q 021501 109 LVRNEYSWN-REANMLFLETPIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIP 186 (311)
Q Consensus 109 l~~n~~sW~-~~anllfiDqPvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 186 (311)
... +-.+++.+|.| |.|.|-.... ..+ +-+..++++.++|+ . ....++.|+|+|+||..+-
T Consensus 68 ------~L~~~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg~ia~ 130 (302)
T PRK00870 68 ------ILAAAGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGGLIGL 130 (302)
T ss_pred ------HHHhCCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHH----H---cCCCCEEEEEEChHHHHHH
Confidence 111 23689999988 9998843211 122 23444555555554 2 2346899999999998877
Q ss_pred HHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 187 QLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 187 ~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
.+|.+-.+ .++++++.++.
T Consensus 131 ~~a~~~p~--------~v~~lvl~~~~ 149 (302)
T PRK00870 131 RLAAEHPD--------RFARLVVANTG 149 (302)
T ss_pred HHHHhChh--------heeEEEEeCCC
Confidence 77654222 37788877754
No 11
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.34 E-value=1.1e-06 Score=78.67 Aligned_cols=109 Identities=20% Similarity=0.246 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
...|.||+++||||+++.+...+.+ .+.. +-.+++.+|.| |.|.|.......- ..+-+..+++
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~---------~l~~------~g~~vi~~d~~-G~G~s~~~~~~~~-~~~~~~~~~~ 85 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRE---------LLKE------EGREVIMYDQL-GCGYSDQPDDSDE-LWTIDYFVDE 85 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHH---------HHHh------cCCEEEEEcCC-CCCCCCCCCcccc-cccHHHHHHH
Confidence 3468899999999998653222211 0111 13679999988 9998864322110 0123344555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+.+++.. +..++++|+|+|+||..+..+|..-. -.++++++.++..
T Consensus 86 ~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p--------~~v~~lvl~~~~~ 131 (288)
T TIGR01250 86 LEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYG--------QHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCc--------cccceeeEecccc
Confidence 5444432 23456999999999998777775421 2478888887654
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.30 E-value=2.9e-06 Score=77.72 Aligned_cols=125 Identities=13% Similarity=0.059 Sum_probs=78.8
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-ccchhhhccccccccccc
Q 021501 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYS 136 (311)
Q Consensus 58 ~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-~anllfiDqPvGtGfSy~ 136 (311)
.|..++|.+++.. +..+|+||.++|..++|..+. .+ -..+.+ -..++-+|.| |.|.|-.
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~-~~----------------~~~l~~~g~~via~D~~-G~G~S~~ 68 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYE-EL----------------AENISSLGILVFSHDHI-GHGRSNG 68 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHH-HH----------------HHHHHhCCCEEEEccCC-CCCCCCC
Confidence 3567888777664 345689999999977766521 11 112333 2578999988 9999853
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
.. +...+-....+|+.+++...-+.+ ...+++|+|+|.||..+..+|.+ . . -+++|+++.+|.++.
T Consensus 69 ~~---~~~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~---~-p----~~i~~lil~~p~~~~ 134 (276)
T PHA02857 69 EK---MMIDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYK---N-P----NLFTAMILMSPLVNA 134 (276)
T ss_pred cc---CCcCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHh---C-c----cccceEEEecccccc
Confidence 22 111122234566666665443333 35789999999999765555532 1 1 248999999987764
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.29 E-value=3.6e-06 Score=76.04 Aligned_cols=108 Identities=18% Similarity=0.085 Sum_probs=69.3
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHH
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (311)
+...|.||+++|.+|.+..+ ..+.+ ...+..+++.+|.| |.|.|.......+ +-+..++
T Consensus 25 ~~~~~~vv~~hG~~~~~~~~-~~~~~----------------~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~ 83 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHSW-RDLMP----------------PLARSFRVVAPDLP-GHGFTRAPFRFRF---TLPSMAE 83 (278)
T ss_pred CCCCCeEEEEcCCCCCHHHH-HHHHH----------------HHhhCcEEEeecCC-CCCCCCCccccCC---CHHHHHH
Confidence 34568999999998877663 22111 11223689999988 9998864332122 3345566
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
++.++++. +..++++|+|+|+||..+..+|.... -.++++++.++..++
T Consensus 84 ~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p--------~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 84 DLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP--------VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC--------cccceEEEEcCcccc
Confidence 66666653 22357899999999987666654321 237788888876543
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.22 E-value=3.2e-06 Score=75.92 Aligned_cols=104 Identities=14% Similarity=0.187 Sum_probs=71.6
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHH
Q 021501 71 TDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKIT 150 (311)
Q Consensus 71 ~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 150 (311)
.++.++|.||+++|.+|.+..+ +.+.+ .+.+..+++.+|.| |-|.|... ..+ +-++.
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~-~~~~~----------------~l~~~~~vi~~D~~-G~G~s~~~--~~~---~~~~~ 67 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNL-GVLAR----------------DLVNDHDIIQVDMR-NHGLSPRD--PVM---NYPAM 67 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHH-HHHHH----------------HHhhCCeEEEECCC-CCCCCCCC--CCC---CHHHH
Confidence 3556789999999999988763 22211 13345689999998 88888532 222 33456
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
++|+.+++..+ ...+++|+|+|+||..+..+|.+..+ .++++++.++
T Consensus 68 ~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~ 114 (255)
T PRK10673 68 AQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEec
Confidence 77888777642 33579999999999988877755332 3777777653
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.17 E-value=8.4e-06 Score=76.62 Aligned_cols=124 Identities=21% Similarity=0.314 Sum_probs=73.1
Q ss_pred EEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCc-ccccchhhhcc
Q 021501 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSW-NREANMLFLET 127 (311)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW-~~~anllfiDq 127 (311)
.+|+.+.+ +..++|.-. .++. .|.||+++|+||.++. .... ..| .+..+|+-+|.
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~-~~~~-----------------~~~~~~~~~vi~~D~ 61 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTD-PGCR-----------------RFFDPETYRIVLFDQ 61 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCC-HHHH-----------------hccCccCCEEEEECC
Confidence 46777764 466776532 2222 4557899999998654 1110 011 13468999998
Q ss_pred ccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeee
Q 021501 128 PIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGI 207 (311)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi 207 (311)
| |.|.|..... .+ ..+..+.++++..+++ .. .-.+++++|+||||..+-.+|.+-.+ .++++
T Consensus 62 ~-G~G~S~~~~~-~~-~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~--------~v~~l 123 (306)
T TIGR01249 62 R-GCGKSTPHAC-LE-ENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE--------VVTGL 123 (306)
T ss_pred C-CCCCCCCCCC-cc-cCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH--------hhhhh
Confidence 8 9998863221 11 1122334444444433 32 23579999999999877766654322 26777
Q ss_pred EeeCccc
Q 021501 208 ALGNPVL 214 (311)
Q Consensus 208 ~Igng~~ 214 (311)
++.+..+
T Consensus 124 vl~~~~~ 130 (306)
T TIGR01249 124 VLRGIFL 130 (306)
T ss_pred eeecccc
Confidence 7776654
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.16 E-value=3.3e-06 Score=72.25 Aligned_cols=103 Identities=23% Similarity=0.293 Sum_probs=67.4
Q ss_pred EEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHHH
Q 021501 79 VLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFL 158 (311)
Q Consensus 79 ilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL 158 (311)
||+++|.++.+..+. .+.+ .+.+-.+++.+|.| |.|.|-.... +...+-++.++++.+++
T Consensus 1 vv~~hG~~~~~~~~~-~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~~l 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD-PLAE----------------ALARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAELL 60 (228)
T ss_dssp EEEE-STTTTGGGGH-HHHH----------------HHHTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHH-HHHH----------------HHhCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhhcc
Confidence 689999999887632 2211 12246689999999 9999864332 11123344555555555
Q ss_pred HHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 159 KNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 159 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+ ... .++++|+|+|+||..+-.+|.+..+ .++|+++.++....
T Consensus 61 ~----~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 61 D----ALG---IKKVILVGHSMGGMIALRLAARYPD--------RVKGLVLLSPPPPL 103 (228)
T ss_dssp H----HTT---TSSEEEEEETHHHHHHHHHHHHSGG--------GEEEEEEESESSSH
T ss_pred c----ccc---ccccccccccccccccccccccccc--------ccccceeecccccc
Confidence 4 332 3689999999999887777644222 48999999988754
No 17
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.11 E-value=5.9e-06 Score=76.64 Aligned_cols=106 Identities=17% Similarity=0.080 Sum_probs=70.3
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCC---cccChHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSY---QGVGDKITAR 152 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~---~~~~~~~~a~ 152 (311)
.|.||+++|.++.+.+|-..+ + .+.+..+++.+|.| |.|.|........ ...+-++.|+
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~-~----------------~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNT-P----------------VLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CCeEEEECCCCCChhHHHHHH-H----------------HHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHHHH
Confidence 478999999999988742221 1 23445689999999 9999964321110 0113344566
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
++.++|.+. ..++++|+|+|.||..+-.+|.+-.+ .++++++.|+..
T Consensus 91 ~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lili~~~~ 137 (294)
T PLN02824 91 QLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE--------LVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh--------heeEEEEECCCc
Confidence 666666542 34689999999999887777654332 378889888754
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.07 E-value=1.9e-05 Score=75.74 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-ccchhhhccccccccccc
Q 021501 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYS 136 (311)
Q Consensus 58 ~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-~anllfiDqPvGtGfSy~ 136 (311)
.+..+|+......+ ...+|+||+++|..+.++.+.-.+ -..+.+ -.+|+-+|.| |.|.|-.
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~----------------~~~l~~~g~~v~~~D~~-G~G~S~~ 131 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGI----------------ARKIASSGYGVFAMDYP-GFGLSEG 131 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHH----------------HHHHHhCCCEEEEecCC-CCCCCCC
Confidence 35678875544322 245699999999866554311111 012332 3679999999 9998853
Q ss_pred cCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 137 KDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 137 ~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.. .+ ..+-+..++|+.++++. +...+++...+++|+|+|+||..+-.+|.+ + . -.++|+++.++...
T Consensus 132 ~~--~~-~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-p----~~v~glVLi~p~~~ 198 (349)
T PLN02385 132 LH--GY-IPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-P----NAWDGAILVAPMCK 198 (349)
T ss_pred CC--CC-cCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-c----chhhheeEeccccc
Confidence 21 22 11234456677666654 333445556689999999999776555432 1 1 23788888887643
No 19
>PRK06489 hypothetical protein; Provisional
Probab=98.07 E-value=2.8e-05 Score=74.95 Aligned_cols=115 Identities=12% Similarity=0.037 Sum_probs=61.0
Q ss_pred CCEEEEEcCCCChhhhhh-hcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCC---CcccChHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGV-GAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASS---YQGVGDKITA 151 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~-g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~---~~~~~~~~~a 151 (311)
.|.||.++|++|.+..+. ..+.+ ... .....--.+..+|+.+|.| |.|.|-...... ....+-+..+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~---~l~-----~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a 139 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAG---ELF-----GPGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMV 139 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHH---Hhc-----CCCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHH
Confidence 688999999998765521 01100 000 0000001244689999999 999885321110 0011223344
Q ss_pred HHHHHHHHHHHHHCCCCCCCCe-EEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 152 RDNLVFLKNWFLKFPQYRNRSL-FITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+++.+++.+ ++.-.++ +|+|+|+||..+-.+|.+-.+ .++++++.++.
T Consensus 140 ~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--------~V~~LVLi~s~ 188 (360)
T PRK06489 140 EAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKYPD--------FMDALMPMASQ 188 (360)
T ss_pred HHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhCch--------hhheeeeeccC
Confidence 444443322 1222455 489999999876666654332 26777766653
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.06 E-value=2.6e-05 Score=73.76 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=80.4
Q ss_pred eEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-ccchhhh
Q 021501 47 QYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFL 125 (311)
Q Consensus 47 ~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-~anllfi 125 (311)
...+++... .+..++|+..........+|+||+++|..+.++-..-.+ ...+.+ -.+|+-+
T Consensus 32 ~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~----------------~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 32 GSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST----------------AIFLAQMGFACFAL 93 (330)
T ss_pred cccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH----------------HHHHHhCCCEEEEe
Confidence 345666543 356787754332221235689999999854332100000 012333 3689999
Q ss_pred ccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeee
Q 021501 126 ETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLK 205 (311)
Q Consensus 126 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLk 205 (311)
|.| |.|.|-... .+ ..+-+..++|+..+++.. ....++...+++|+|+|+||..+-.+|.+ .. -.++
T Consensus 94 D~r-GhG~S~~~~--~~-~~~~~~~~~D~~~~i~~l-~~~~~~~~~~i~l~GhSmGG~ia~~~a~~----~p----~~v~ 160 (330)
T PLN02298 94 DLE-GHGRSEGLR--AY-VPNVDLVVEDCLSFFNSV-KQREEFQGLPRFLYGESMGGAICLLIHLA----NP----EGFD 160 (330)
T ss_pred cCC-CCCCCCCcc--cc-CCCHHHHHHHHHHHHHHH-HhcccCCCCCEEEEEecchhHHHHHHHhc----Cc----ccce
Confidence 999 999884321 21 123344577777777643 33223445689999999999866544432 11 1488
Q ss_pred eeEeeCcccC
Q 021501 206 GIALGNPVLE 215 (311)
Q Consensus 206 Gi~Igng~~d 215 (311)
|+++.+++.+
T Consensus 161 ~lvl~~~~~~ 170 (330)
T PLN02298 161 GAVLVAPMCK 170 (330)
T ss_pred eEEEeccccc
Confidence 9999888764
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.96 E-value=2.7e-05 Score=71.69 Aligned_cols=117 Identities=17% Similarity=0.140 Sum_probs=72.8
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccC
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~ 138 (311)
+..+.|+..+. . ...|.||+++|-++.+..|...+. ...+..+++.+|.| |.|.|-..
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dl~-G~G~S~~~- 68 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE-----------------ALDPDLEVIAFDVP-GVGGSSTP- 68 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH-----------------HhccCceEEEECCC-CCCCCCCC-
Confidence 45677766432 2 234678999997666666322210 12235689999998 99998432
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
...+ +-+..++++.+++.. +.-.+++|+|+|+||..+-.+|.+-.+ .++++++.|+...
T Consensus 69 ~~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 69 RHPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAG 127 (276)
T ss_pred CCcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCc
Confidence 1122 233345555555554 224679999999999877666654322 3888898887653
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.94 E-value=2.3e-05 Score=72.74 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=69.5
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.||+++|.|+.+..|-.+. ..+.+...++-+|.| |.|.|.... ..+ +-+..|+++.
T Consensus 27 g~~vvllHG~~~~~~~w~~~~-----------------~~L~~~~~via~D~~-G~G~S~~~~-~~~---~~~~~a~dl~ 84 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNII-----------------PHLAGLGRCLAPDLI-GMGASDKPD-IDY---TFADHARYLD 84 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHH-----------------HHHhhCCEEEEEcCC-CCCCCCCCC-CCC---CHHHHHHHHH
Confidence 478999999998887742221 023334589999988 999985322 223 3344566666
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
++++. +...+++|+|+|.||..+-.+|.+..+ .++++++.|+...
T Consensus 85 ~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~ 129 (295)
T PRK03592 85 AWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD--------RVRGIAFMEAIVR 129 (295)
T ss_pred HHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh--------heeEEEEECCCCC
Confidence 66654 234689999999999877766654332 3888999887543
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.90 E-value=2.5e-05 Score=69.66 Aligned_cols=100 Identities=20% Similarity=0.164 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.||+++|.||++..|.... + .. +..+++.+|.| |.|.|.... . .+-+..++++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~--------------~---~l-~~~~vi~~D~~-G~G~S~~~~--~---~~~~~~~~~l~ 57 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVG--------------E---AL-PDYPRLYIDLP-GHGGSAAIS--V---DGFADVSRLLS 57 (242)
T ss_pred CCEEEEECCCCCChHHHHHHH--------------H---Hc-CCCCEEEecCC-CCCCCCCcc--c---cCHHHHHHHHH
Confidence 588999999999887742111 1 11 24789999988 888885321 1 12334455555
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+++.. +.-.+++++|+|+||..+-.+|.+..+ . .++++++.++.
T Consensus 58 ~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~---~----~v~~lvl~~~~ 101 (242)
T PRK11126 58 QTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLA---G----GLCGLIVEGGN 101 (242)
T ss_pred HHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCc---c----cccEEEEeCCC
Confidence 55543 245689999999999776666654311 1 27788887654
No 24
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.88 E-value=7.4e-05 Score=73.61 Aligned_cols=109 Identities=13% Similarity=0.134 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
..+|.||+++|.++.+..+.-.+ ..+.+..+|+-+|.| |.|.|-.. .+...+.++..+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-----------------~~L~~~~~vi~~D~r-G~G~S~~~---~~~~~~~~~~~~~ 161 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-----------------DALASRFRVIAIDQL-GWGGSSRP---DFTCKSTEETEAW 161 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-----------------HHHHhCCEEEEECCC-CCCCCCCC---CcccccHHHHHHH
Confidence 46799999999987665521111 123345789999988 88887421 1111122233334
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+.+.+.+|.+.. ...+++|+|||+||..+-.+|.+-. -.++++++.+++-
T Consensus 162 ~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p--------~~v~~lvl~~p~~ 211 (402)
T PLN02894 162 FIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP--------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc--------hhhcEEEEECCcc
Confidence 555666666543 2357999999999987666654322 2378888887653
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.86 E-value=3e-05 Score=67.57 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
..+|++|+++|-++.+..+ ..+.+ ...+..+++.+|.| |.|.|.... .. .+-+..+++
T Consensus 11 ~~~~~li~~hg~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~-~~---~~~~~~~~~ 68 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRMW-DPVLP----------------ALTPDFRVLRYDKR-GHGLSDAPE-GP---YSIEDLADD 68 (251)
T ss_pred CCCCeEEEEcCcccchhhH-HHHHH----------------HhhcccEEEEecCC-CCCCCCCCC-CC---CCHHHHHHH
Confidence 3679999999865555442 11111 11234689999998 999884321 12 234455666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHH
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADL 191 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 191 (311)
+.++++.+ ...+++|+|+|+||..+-.+|.+
T Consensus 69 ~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 69 VLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 66666532 24579999999999987777654
No 26
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.83 E-value=5e-05 Score=74.17 Aligned_cols=133 Identities=21% Similarity=0.327 Sum_probs=78.3
Q ss_pred eEEEEEeecC--CCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccC
Q 021501 61 ALFYYFAEAE--TDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 61 ~lfy~f~e~~--~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~ 138 (311)
.-.||++++. .+|.++|+|++++|| |.+.+.=|+.+.. ..+=+...+...+|.+|-..-. | ...
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~---L~~i~~~l~~~SILvLDYsLt~--~-~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF---LLNIYKLLPEVSILVLDYSLTS--S-DEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH---HHHHHHHcCCCeEEEEeccccc--c-ccC
Confidence 3568899852 367889999999999 4554544554311 0111111223378888844222 0 001
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccc
Q 021501 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~ 218 (311)
...|. + +..++.+..+...+. ....++.|+|+|.||+-+-.+.+++.+.+.. .--|.+++.+||+++..
T Consensus 171 ~~~yP-t----QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~---~~Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 171 GHKYP-T----QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL---PYPKSAILISPWVNLVP 239 (374)
T ss_pred CCcCc-h----HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC---CCCceeEEECCCcCCcC
Confidence 11221 1 122233333322222 2346799999999999999999988764432 33578999999999873
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.83 E-value=4.2e-05 Score=66.39 Aligned_cols=105 Identities=22% Similarity=0.248 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
+|.||+++|.+|.+..+..+. . .+.+-.+++-+|.| |.|.|.... .....+-++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~---------------~--~L~~~~~v~~~d~~-g~G~s~~~~--~~~~~~~~~~~~~~- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI---------------E--LLGPHFRCLAIDLP-GHGSSQSPD--EIERYDFEEAAQDI- 59 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH---------------H--HhcccCeEEEEcCC-CCCCCCCCC--ccChhhHHHHHHHH-
Confidence 488999999988876632111 0 11134688999988 888884321 11111223334442
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+..+.+.. ..++++|+|+|+||..+..+|.+..+ .++++++.++..
T Consensus 60 --~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~--------~v~~lil~~~~~ 105 (251)
T TIGR03695 60 --LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE--------RVQGLILESGSP 105 (251)
T ss_pred --HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch--------heeeeEEecCCC
Confidence 33333333 35789999999999987777765322 378888877643
No 28
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.80 E-value=9.9e-05 Score=67.37 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCc-ccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSW-NREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 75 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW-~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
+.|.||+++|.++.+..+.-.+ .+-... .+..+++-+|.| |.|.|-.... +. ......+++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~--------------~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~-~~--~~~~~~~~~ 90 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYY--------------RNIGPFVDAGYRVILKDSP-GFNKSDAVVM-DE--QRGLVNARA 90 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHH--------------HHHHHHHhCCCEEEEECCC-CCCCCCCCcC-cc--cccchhHHH
Confidence 3477999999866544321111 000011 223789999988 9998843211 11 111123555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
+.++++. +..++++++|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 91 l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~~--------v~~lvl~~~ 134 (282)
T TIGR03343 91 VKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPDR--------IGKLILMGP 134 (282)
T ss_pred HHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChHh--------hceEEEECC
Confidence 5555543 2456899999999999888877644332 566776665
No 29
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.78 E-value=5.4e-05 Score=70.62 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=70.4
Q ss_pred EEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhcc
Q 021501 48 YSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLET 127 (311)
Q Consensus 48 ~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDq 127 (311)
.+.++++++ ..++|. +. . +.|.||+++|.|..+..+. .+. ..+.+..+++-+|.
T Consensus 15 ~~~~~~~~~---~~i~y~--~~-G---~~~~iv~lHG~~~~~~~~~-~~~----------------~~l~~~~~vi~~D~ 68 (286)
T PRK03204 15 ESRWFDSSR---GRIHYI--DE-G---TGPPILLCHGNPTWSFLYR-DII----------------VALRDRFRCVAPDY 68 (286)
T ss_pred cceEEEcCC---cEEEEE--EC-C---CCCEEEEECCCCccHHHHH-HHH----------------HHHhCCcEEEEECC
Confidence 355677643 456543 11 1 3578999999986554421 110 12333478999998
Q ss_pred ccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeee
Q 021501 128 PIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGI 207 (311)
Q Consensus 128 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi 207 (311)
| |.|.|-......+ +-+..++++.++++ .. ...+++|+|+|+||..+-.+|..-. -.++++
T Consensus 69 ~-G~G~S~~~~~~~~---~~~~~~~~~~~~~~----~~---~~~~~~lvG~S~Gg~va~~~a~~~p--------~~v~~l 129 (286)
T PRK03204 69 L-GFGLSERPSGFGY---QIDEHARVIGEFVD----HL---GLDRYLSMGQDWGGPISMAVAVERA--------DRVRGV 129 (286)
T ss_pred C-CCCCCCCCCcccc---CHHHHHHHHHHHHH----Hh---CCCCEEEEEECccHHHHHHHHHhCh--------hheeEE
Confidence 8 8888843211112 22334444444443 32 3467999999999975444443211 248888
Q ss_pred EeeCccc
Q 021501 208 ALGNPVL 214 (311)
Q Consensus 208 ~Igng~~ 214 (311)
++.++..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 8887754
No 30
>PLN02578 hydrolase
Probab=97.77 E-value=0.00011 Score=70.73 Aligned_cols=101 Identities=17% Similarity=0.113 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.||.++|-++.+..|.-.+ ..+.+..+++-+|.| |.|.|-... ..| +.+..++++.
T Consensus 86 g~~vvliHG~~~~~~~w~~~~-----------------~~l~~~~~v~~~D~~-G~G~S~~~~-~~~---~~~~~a~~l~ 143 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYNI-----------------PELAKKYKVYALDLL-GFGWSDKAL-IEY---DAMVWRDQVA 143 (354)
T ss_pred CCeEEEECCCCCCHHHHHHHH-----------------HHHhcCCEEEEECCC-CCCCCCCcc-ccc---CHHHHHHHHH
Confidence 355789998766554431111 012345789999999 888884321 222 3344566777
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+|+++. ...+++|+|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 144 ~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~ 186 (354)
T PLN02578 144 DFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSA 186 (354)
T ss_pred HHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCC
Confidence 777643 24689999999999877777665433 37888887754
No 31
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.70 E-value=0.00015 Score=70.13 Aligned_cols=104 Identities=19% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHH
Q 021501 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDN 154 (311)
Q Consensus 75 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~ 154 (311)
..|.||+++|.++.+..|...+. ...+..+++-+|.| |.|.|-......| +-+..++++
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~-----------------~L~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~~l 145 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIG-----------------VLAKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAELI 145 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHHHH
Confidence 34789999999988777422210 12334689999999 8888843221122 234456666
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
.++|.. +...+++|+|+|+||..+-.+|..- .. =.++|+++.|+.
T Consensus 146 ~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~P-----~rV~~LVLi~~~ 190 (360)
T PLN02679 146 LDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--TR-----DLVRGLVLLNCA 190 (360)
T ss_pred HHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--Ch-----hhcCEEEEECCc
Confidence 666653 2346899999999996544443211 11 137888888764
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.69 E-value=0.00028 Score=69.61 Aligned_cols=127 Identities=20% Similarity=0.216 Sum_probs=78.0
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhcccccccccccc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~ 137 (311)
+..+|++...... ...+|+|++++|.++.+..+. .+.+ .+. +-.+++-+|.| |.|.|-..
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~-~~a~----------------~L~~~Gy~V~~~D~r-GhG~S~~~ 180 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYL-HFAK----------------QLTSCGFGVYAMDWI-GHGGSDGL 180 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHH-HHHH----------------HHHHCCCEEEEeCCC-CCCCCCCC
Confidence 3466665554432 345789999999987765421 1100 122 23578899988 88888532
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
. .+ ..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|. +.+. .-.++|+++.+|+++.
T Consensus 181 ~--~~-~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~~--~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 181 H--GY-VPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPSI--EDKLEGIVLTSPALRV 247 (395)
T ss_pred C--CC-CcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccCc--ccccceEEEECccccc
Confidence 1 22 12334456677777776555555 458999999999987654432 2110 1248899999998753
No 33
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.67 E-value=0.00031 Score=71.08 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCCCCceeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccc
Q 021501 40 QPQVGFQQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE 119 (311)
Q Consensus 40 ~~~~~~~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~ 119 (311)
|++-..+...-|+..++ ..+||...... +...+|.||+++|.+|.+..|...+.. .+.. .+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~---~~l~~~~~gp~-~~~~k~~VVLlHG~~~s~~~W~~~~~~---------~L~~---~~~~~ 232 (481)
T PLN03087 169 WSDCDCKFCTSWLSSSN---ESLFVHVQQPK-DNKAKEDVLFIHGFISSSAFWTETLFP---------NFSD---AAKST 232 (481)
T ss_pred ccccccceeeeeEeeCC---eEEEEEEecCC-CCCCCCeEEEECCCCccHHHHHHHHHH---------HHHH---HhhCC
Confidence 33333344456665542 46777654433 223357899999999888774211100 0110 23445
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
..++-+|.| |.|.|-......| +-++.++++. ..+.+. +...+++|+|+|+||..+-.+|.+-.+
T Consensus 233 yrVia~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 233 YRLFAVDLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CEEEEECCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 689999999 8888742211222 2233343332 133333 335689999999999887777654332
Q ss_pred ceeeeeeeEeeCcc
Q 021501 200 ELFNLKGIALGNPV 213 (311)
Q Consensus 200 ~~inLkGi~Igng~ 213 (311)
.++++++.++.
T Consensus 298 ---~V~~LVLi~~~ 308 (481)
T PLN03087 298 ---AVKSLTLLAPP 308 (481)
T ss_pred ---hccEEEEECCC
Confidence 27788887753
No 34
>PLN02965 Probable pheophorbidase
Probab=97.63 E-value=9.1e-05 Score=67.42 Aligned_cols=100 Identities=10% Similarity=0.143 Sum_probs=62.3
Q ss_pred EEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCc-ccccchhhhccccccccccccCCCCCcccChHHHHHHHHHH
Q 021501 79 VLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSW-NREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVF 157 (311)
Q Consensus 79 ilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW-~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~f 157 (311)
|++++|.++.+..|.... ..+ .+...++-+|.| |.|.|-......+ +-+..|+++.++
T Consensus 6 vvllHG~~~~~~~w~~~~-----------------~~L~~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~dl~~~ 64 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLA-----------------TLLDAAGFKSTCVDLT-GAGISLTDSNTVS---SSDQYNRPLFAL 64 (255)
T ss_pred EEEECCCCCCcCcHHHHH-----------------HHHhhCCceEEEecCC-cCCCCCCCccccC---CHHHHHHHHHHH
Confidence 888999886665532211 012 223579999999 9998843222122 334456666666
Q ss_pred HHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 158 LKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 158 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+.+ .+ ..++++++|+|+||..+..+|.+..+ .++++++.|+.
T Consensus 65 l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~ 106 (255)
T PLN02965 65 LSD----LP--PDHKVILVGHSIGGGSVTEALCKFTD--------KISMAIYVAAA 106 (255)
T ss_pred HHh----cC--CCCCEEEEecCcchHHHHHHHHhCch--------heeEEEEEccc
Confidence 653 21 12589999999999887777754322 26778877654
No 35
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.63 E-value=8.3e-05 Score=67.33 Aligned_cols=94 Identities=14% Similarity=0.047 Sum_probs=60.8
Q ss_pred CEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHH
Q 021501 77 PLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (311)
Q Consensus 77 PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (311)
|.||+++|.++++..|.. + -..+.+..+++.+|.| |.|.|... ..+ +-++.++++.
T Consensus 14 ~~ivllHG~~~~~~~w~~-~----------------~~~L~~~~~vi~~Dl~-G~G~S~~~--~~~---~~~~~~~~l~- 69 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRC-I----------------DEELSSHFTLHLVDLP-GFGRSRGF--GAL---SLADMAEAVL- 69 (256)
T ss_pred CeEEEECCCCCChhHHHH-H----------------HHHHhcCCEEEEecCC-CCCCCCCC--CCC---CHHHHHHHHH-
Confidence 569999998888877421 1 1133456789999988 99988532 122 2233333332
Q ss_pred HHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
+ +...+++++|+|+||..+..+|.+-. -.++++++.|+
T Consensus 70 ---~-------~~~~~~~lvGhS~Gg~ia~~~a~~~p--------~~v~~lili~~ 107 (256)
T PRK10349 70 ---Q-------QAPDKAIWLGWSLGGLVASQIALTHP--------ERVQALVTVAS 107 (256)
T ss_pred ---h-------cCCCCeEEEEECHHHHHHHHHHHhCh--------HhhheEEEecC
Confidence 2 22467999999999988777765322 23788888776
No 36
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.60 E-value=0.00017 Score=75.09 Aligned_cols=138 Identities=19% Similarity=0.284 Sum_probs=83.4
Q ss_pred EEecCCCCceEEEEEeecCC-CCCC-CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccC-cccccchhhhccc
Q 021501 52 VTVDEKKQRALFYYFAEAET-DPAS-KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYS-WNREANMLFLETP 128 (311)
Q Consensus 52 l~v~~~~~~~lfy~f~e~~~-~p~~-~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~s-W~~~anllfiDqP 128 (311)
+.+....+..+..|++.... ++.. -|+|++++||| +++ .|. . ...+... +.+-+.|++++-.
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~-------~-----~~~~~q~~~~~G~~V~~~n~R 432 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY-------S-----FNPEIQVLASAGYAVLAPNYR 432 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc-------c-----cchhhHHHhcCCeEEEEeCCC
Confidence 33434345678878776654 3333 49999999999 444 331 0 0111112 2234578888855
Q ss_pred cccccccc--cCC-CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeee
Q 021501 129 IGVGFSYS--KDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLK 205 (311)
Q Consensus 129 vGtGfSy~--~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLk 205 (311)
--+||+.. ... .++ . ....+|+.+++. |+.+.|.....++.|+|.||||. ++..++.+.. .++
T Consensus 433 GS~GyG~~F~~~~~~~~---g-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGy----mtl~~~~~~~-----~f~ 498 (620)
T COG1506 433 GSTGYGREFADAIRGDW---G-GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGY----MTLLAATKTP-----RFK 498 (620)
T ss_pred CCCccHHHHHHhhhhcc---C-CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHH----HHHHHHhcCc-----hhh
Confidence 45565532 111 111 1 234678888888 99999988878899999999994 4555554321 267
Q ss_pred eeEeeCcccCccc
Q 021501 206 GIALGNPVLEFAT 218 (311)
Q Consensus 206 Gi~Igng~~d~~~ 218 (311)
..+...+.++...
T Consensus 499 a~~~~~~~~~~~~ 511 (620)
T COG1506 499 AAVAVAGGVDWLL 511 (620)
T ss_pred eEEeccCcchhhh
Confidence 7777777665443
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=97.60 E-value=0.00025 Score=67.62 Aligned_cols=125 Identities=13% Similarity=0.030 Sum_probs=74.2
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhcccccccccccc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~ 137 (311)
+..++|+..... ..+|+||.++|-.+.+.. ...+. + .+. +-.+++-+|.| |.|.|-..
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~---~-------------~l~~~g~~v~~~D~~-G~G~S~~~ 98 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELA---Y-------------DLFHLGYDVLIIDHR-GQGRSGRL 98 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHH---H-------------HHHHCCCeEEEEcCC-CCCCCCCC
Confidence 456777655432 456899999998665543 11110 0 011 23578999988 99988532
Q ss_pred CCCCC--cccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 138 DASSY--QGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 138 ~~~~~--~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
..... ...+-+..++++..+++.....+ ...+++++|+|+||..+-.+|.. .. -.++|+++.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~p-----~~v~~lvl~~p~~~ 167 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---HP-----GVFDAIALCAPMFG 167 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---CC-----CCcceEEEECchhc
Confidence 11100 00122345666666666544333 35789999999999766555532 21 23789999988754
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.57 E-value=0.00029 Score=67.12 Aligned_cols=103 Identities=18% Similarity=0.120 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
.+.|.+|+++|.+|.+..+ ..+.+ ...+..+++-+|.| |.|.|-.... . .+-+..+++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~-~~~~~----------------~l~~~~~v~~~d~~-g~G~s~~~~~-~---~~~~~~~~~ 186 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNW-LFNHA----------------ALAAGRPVIALDLP-GHGASSKAVG-A---GSLDELAAA 186 (371)
T ss_pred CCCCeEEEECCCCCccchH-HHHHH----------------HHhcCCEEEEEcCC-CCCCCCCCCC-C---CCHHHHHHH
Confidence 4568899999998887763 22211 11223679999988 9998842211 1 123344555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+.++++ . +...+++|+|+|+||..+..+|..-. -.++++++.++.
T Consensus 187 ~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~--------~~v~~lv~~~~~ 231 (371)
T PRK14875 187 VLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAP--------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCc--------hheeEEEEECcC
Confidence 544443 3 33457999999999998887775421 236777776654
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.54 E-value=0.00031 Score=65.30 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
.++|.|++++|..+.++.|..+. + .|.. +-.+++-+|.| |.|.|....... .+-+..+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~-~---------~L~~------~g~~vi~~dl~-g~G~s~~~~~~~---~~~~~~~~~ 75 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIR-C---------LMEN------SGYKVTCIDLK-SAGIDQSDADSV---TTFDEYNKP 75 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHH-H---------HHHh------CCCEEEEeccc-CCCCCCCCcccC---CCHHHHHHH
Confidence 56799999999877766632111 0 0111 12578999999 888764322111 233344555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+.++++ ... ..++++|+|+||||..+-.++....+ .++++++.++.
T Consensus 76 l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~ 121 (273)
T PLN02211 76 LIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAAT 121 (273)
T ss_pred HHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhChh--------heeEEEEeccc
Confidence 555554 322 14689999999999876666643322 26677776554
No 40
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.53 E-value=0.00025 Score=69.70 Aligned_cols=109 Identities=15% Similarity=0.127 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARD 153 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~ 153 (311)
...|.||+++|.|+.+..|-.+. + .+.+..+++-+|.| |.|.|.......-...+-+..+++
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~-~----------------~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVL-P----------------VLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHH-H----------------HHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHH
Confidence 45689999999998776632221 0 12334689999998 999986432210001133445666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
+.+++++. ...+++|+|+|+||..+-.+|.+-. -.++++++.|+...
T Consensus 187 l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P--------~~v~~lILi~~~~~ 233 (383)
T PLN03084 187 LESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHP--------DKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhCh--------HhhcEEEEECCCCc
Confidence 66666542 3457999999999965444443221 23889999987643
No 41
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.51 E-value=0.00013 Score=63.53 Aligned_cols=96 Identities=11% Similarity=0.037 Sum_probs=57.9
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.||+++|.++.+..+.... + ...+..+++.+|.| |.|.|... ..+ +-+..++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~-~----------------~l~~~~~vi~~d~~-G~G~s~~~--~~~---~~~~~~~--- 57 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLD-E----------------ELSAHFTLHLVDLP-GHGRSRGF--GPL---SLADAAE--- 57 (245)
T ss_pred CceEEEEcCCCCchhhHHHHH-H----------------hhccCeEEEEecCC-cCccCCCC--CCc---CHHHHHH---
Confidence 478999999877666532111 0 11224689999988 88887432 111 2222233
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
.+... ...+++++|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 58 -~~~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~ 99 (245)
T TIGR01738 58 -AIAAQ-------APDPAIWLGWSLGGLVALHIAATHPD--------RVRALVTVASS 99 (245)
T ss_pred -HHHHh-------CCCCeEEEEEcHHHHHHHHHHHHCHH--------hhheeeEecCC
Confidence 23221 12589999999999887777654322 26777776654
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.51 E-value=0.00031 Score=67.74 Aligned_cols=132 Identities=17% Similarity=0.269 Sum_probs=83.3
Q ss_pred EEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccc
Q 021501 49 SGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETP 128 (311)
Q Consensus 49 sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqP 128 (311)
+=|+.+.. +...+ .++-...+.+++-++.++|= |+++ |+| ..|=.+..+.-||-.||.|
T Consensus 67 ~~~v~i~~--~~~iw--~~~~~~~~~~~~plVliHGy-GAg~---g~f-------------~~Nf~~La~~~~vyaiDll 125 (365)
T KOG4409|consen 67 KKYVRIPN--GIEIW--TITVSNESANKTPLVLIHGY-GAGL---GLF-------------FRNFDDLAKIRNVYAIDLL 125 (365)
T ss_pred eeeeecCC--CceeE--EEeecccccCCCcEEEEecc-chhH---HHH-------------HHhhhhhhhcCceEEeccc
Confidence 44555552 22332 33333344667778889973 3332 222 1244455667789999999
Q ss_pred cccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeE
Q 021501 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA 208 (311)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~ 208 (311)
|-|.|-... + ..+.+..-+.+.+-+++|..... =.+.+|+|||+||..+...|.+-.++ ++-++
T Consensus 126 -G~G~SSRP~---F-~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer--------V~kLi 189 (365)
T KOG4409|consen 126 -GFGRSSRPK---F-SIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER--------VEKLI 189 (365)
T ss_pred -CCCCCCCCC---C-CCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh--------hceEE
Confidence 888885322 2 12222334578899999998765 35799999999998777777666554 66688
Q ss_pred eeCcccCcc
Q 021501 209 LGNPVLEFA 217 (311)
Q Consensus 209 Igng~~d~~ 217 (311)
|.+||--+.
T Consensus 190 LvsP~Gf~~ 198 (365)
T KOG4409|consen 190 LVSPWGFPE 198 (365)
T ss_pred Eeccccccc
Confidence 888875433
No 43
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.49 E-value=0.00044 Score=68.53 Aligned_cols=79 Identities=24% Similarity=0.229 Sum_probs=53.5
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
.++|-+|.| |.|.|.... . ..+ .......+.+|+...|.....++.++|+|+||.+++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~--~~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------ 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---L--TQD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------ 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---c--ccc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC------
Confidence 578999999 999884321 1 111 1222244556666777666778999999999999888774321
Q ss_pred ceeeeeeeEeeCcccC
Q 021501 200 ELFNLKGIALGNPVLE 215 (311)
Q Consensus 200 ~~inLkGi~Igng~~d 215 (311)
-.++++++.+|.++
T Consensus 288 --~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 --PRLKAVACLGPVVH 301 (414)
T ss_pred --cCceEEEEECCccc
Confidence 13788888887765
No 44
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.39 E-value=0.00075 Score=60.15 Aligned_cols=113 Identities=14% Similarity=0.113 Sum_probs=58.0
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-----ccchhhhccccccccccccCCCCCcc---
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-----EANMLFLETPIGVGFSYSKDASSYQG--- 144 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-----~anllfiDqPvGtGfSy~~~~~~~~~--- 144 (311)
....|+|++|+|+++.++. ... ...|.+ -..||..|.| |.|.+... .+.+..
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~-----------------~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~-~~~~~~~~~ 69 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVI-----------------DWGWKAAADRYGFVLVAPEQT-SYNSSNNC-WDWFFTHHR 69 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hhh-----------------hcChHHHHHhCCeEEEecCCc-CccccCCC-CCCCCcccc
Confidence 3568999999999987654 210 001222 2357777876 44322110 000000
Q ss_pred cChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 145 VGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 145 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
........++.+++....++++ ....+++|+|+|.||..+-.+|.. + . -.+.++++.+|..
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~---~-p----~~~~~~~~~~g~~ 130 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT---Y-P----DVFAGGASNAGLP 130 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh---C-c----hhheEEEeecCCc
Confidence 0001123334444444333432 344679999999999765555432 1 1 1266776666653
No 45
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.27 E-value=0.0011 Score=61.97 Aligned_cols=130 Identities=12% Similarity=0.095 Sum_probs=72.9
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhccccccccccccC
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~~ 138 (311)
.++|.|+.+.... ..+|+||+++|..+-..-+.-.+. .--..+. .-.+++-+|.| |.|.|-...
T Consensus 10 g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~-------------~la~~La~~Gy~Vl~~Dl~-G~G~S~g~~ 74 (266)
T TIGR03101 10 GFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVA-------------LQARAFAAGGFGVLQIDLY-GCGDSAGDF 74 (266)
T ss_pred CcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHH-------------HHHHHHHHCCCEEEEECCC-CCCCCCCcc
Confidence 4567667655432 337999999985331100000000 0001222 23578999998 999885422
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccc
Q 021501 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~ 218 (311)
. . .+.+..++|+..++ +|++... ..+++|+|+|+||..+..+|.+.. -.++++++.+|.++...
T Consensus 75 ~-~---~~~~~~~~Dv~~ai-~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p--------~~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 75 A-A---ARWDVWKEDVAAAY-RWLIEQG---HPPVTLWGLRLGALLALDAANPLA--------AKCNRLVLWQPVVSGKQ 138 (266)
T ss_pred c-c---CCHHHHHHHHHHHH-HHHHhcC---CCCEEEEEECHHHHHHHHHHHhCc--------cccceEEEeccccchHH
Confidence 1 1 12223344444333 3444432 468999999999988776664321 23788999998877554
Q ss_pred cc
Q 021501 219 DF 220 (311)
Q Consensus 219 ~~ 220 (311)
..
T Consensus 139 ~l 140 (266)
T TIGR03101 139 QL 140 (266)
T ss_pred HH
Confidence 33
No 46
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.23 E-value=0.0015 Score=62.52 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=49.3
Q ss_pred cccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCC-CCeEEEeeeccccchHHHHHHHHHhc
Q 021501 118 REANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRN-RSLFITGESYAGHYIPQLADLMLEFN 196 (311)
Q Consensus 118 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n 196 (311)
+...|+.+|.| |.|-|. . ..+ +.+..|+++.++|.. +.- +.+.|+|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~~---~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~-- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VPI---DTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPA-- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CCC---CHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChH--
Confidence 45789999999 666442 1 222 234457777777764 222 345799999999877777765433
Q ss_pred cccceeeeeeeEeeCccc
Q 021501 197 KKEELFNLKGIALGNPVL 214 (311)
Q Consensus 197 ~~~~~inLkGi~Igng~~ 214 (311)
.++++++.++..
T Consensus 162 ------~V~~LvLi~s~~ 173 (343)
T PRK08775 162 ------RVRTLVVVSGAH 173 (343)
T ss_pred ------hhheEEEECccc
Confidence 278888887654
No 47
>PLN02511 hydrolase
Probab=97.19 E-value=0.0015 Score=64.01 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEcCCCChhhh-hh-hcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHH
Q 021501 72 DPASKPLVLWLNGGPGCSSL-GV-GAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKI 149 (311)
Q Consensus 72 ~p~~~PlilWlnGGPG~SS~-~~-g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 149 (311)
.+.++|+||.++|..|+|.. +. .+. ..-..+-.+++-+|.| |.|-|-......+ . ..
T Consensus 96 ~~~~~p~vvllHG~~g~s~~~y~~~~~----------------~~~~~~g~~vv~~d~r-G~G~s~~~~~~~~-~---~~ 154 (388)
T PLN02511 96 LPADAPVLILLPGLTGGSDDSYVRHML----------------LRARSKGWRVVVFNSR-GCADSPVTTPQFY-S---AS 154 (388)
T ss_pred CCCCCCEEEEECCCCCCCCCHHHHHHH----------------HHHHHCCCEEEEEecC-CCCCCCCCCcCEE-c---CC
Confidence 34678999999999998742 11 111 0011234578999988 8887753322222 1 12
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.++|+.++++..-.++| ..+++++|+|.||..+-.++.+ ... ...+++.++.++-.+
T Consensus 155 ~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~---~~~---~~~v~~~v~is~p~~ 211 (388)
T PLN02511 155 FTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE---EGE---NCPLSGAVSLCNPFD 211 (388)
T ss_pred chHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh---cCC---CCCceEEEEECCCcC
Confidence 34556566655445555 4689999999999765444422 211 234666665444344
No 48
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.13 E-value=0.0037 Score=58.10 Aligned_cols=42 Identities=21% Similarity=0.192 Sum_probs=29.8
Q ss_pred CCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 168 YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 168 ~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
...++++|+|+|+||..+-.+|.+-.+ .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~--------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD--------RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc--------cceEEEEECCccCcc
Confidence 445679999999999765555543211 267888888887764
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.10 E-value=0.0006 Score=59.33 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=49.6
Q ss_pred chhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccc
Q 021501 121 NMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEE 200 (311)
Q Consensus 121 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~ 200 (311)
+|+-+|+| |.|+|....... ...-...++.+.+..+.+..+ .++++++|+||||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~------ 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPD----FPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE------ 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG------
T ss_pred EEEEEeCC-CCCCCCCCccCC----cccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch------
Confidence 57788988 999997310011 122234555566666666554 4459999999999776666544332
Q ss_pred eeeeeeeEeeCcc
Q 021501 201 LFNLKGIALGNPV 213 (311)
Q Consensus 201 ~inLkGi~Igng~ 213 (311)
.++++++.++.
T Consensus 68 --~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 --RVKKLVLISPP 78 (230)
T ss_dssp --GEEEEEEESES
T ss_pred --hhcCcEEEeee
Confidence 48888888875
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=97.10 E-value=0.0014 Score=66.08 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=61.4
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccC
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~ 138 (311)
+..+.|+-.. +.+.|.||+++|.++.+..|. -+.+ -+.+..+|+.+|.| |.|.|....
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~-~~~~----------------~L~~~~~Vi~~D~~-G~G~S~~~~ 69 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWD-GVAP----------------LLADRFRVVAYDVR-GAGRSSAPK 69 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHH-HHHH----------------HhhcceEEEEecCC-CCCCCCCCC
Confidence 4566665332 234789999999987776532 2111 12234689999988 999996432
Q ss_pred C-CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccch
Q 021501 139 A-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYI 185 (311)
Q Consensus 139 ~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 185 (311)
. ..+ +.+..++|+..+++.. . ...|++|+|+|+||..+
T Consensus 70 ~~~~~---~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 70 RTAAY---TLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred ccccc---CHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHH
Confidence 2 122 3455677877777652 1 13569999999999544
No 51
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.03 E-value=0.0012 Score=56.29 Aligned_cols=103 Identities=25% Similarity=0.274 Sum_probs=60.3
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.+++++|+|+++..+...+.. +..... + .+++.+|+| |.|.|. .. .+ .....++++.
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~----------~~~~~~---~-~~~~~~d~~-g~g~s~--~~-~~---~~~~~~~~~~ 79 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV----------LPALAA---R-YRVIAPDLR-GHGRSD--PA-GY---SLSAYADDLA 79 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH----------hhcccc---c-eEEEEeccc-CCCCCC--cc-cc---cHHHHHHHHH
Confidence 67999999999998874321100 001110 1 789999999 999996 11 11 1111144444
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
.++. .. ...++.++|+|+||..+-.++.+..+ .++++++.++..
T Consensus 80 ~~~~----~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~ 123 (282)
T COG0596 80 ALLD----AL---GLEKVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAP 123 (282)
T ss_pred HHHH----Hh---CCCceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCC
Confidence 4443 32 23449999999998665555544433 366666666543
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.98 E-value=0.002 Score=73.95 Aligned_cols=107 Identities=15% Similarity=0.160 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCC-----CCcccCh
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDAS-----SYQGVGD 147 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~-----~~~~~~~ 147 (311)
....|.||++||.+|.+..|..... .+.+..+++.+|.| |.|.|...... .. ..+-
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~~-----------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~-~~si 1428 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIMK-----------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEP-TLSV 1428 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHH-----------------HHhCCCEEEEEcCC-CCCCCCCccccccccccc-cCCH
Confidence 3457899999999999877432210 12234689999988 88888532210 00 1123
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+..++++.++++. +...+++|+|+|+||..+-.+|.+..+ .++++++.++.
T Consensus 1429 ~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~--------~V~~lVlis~~ 1479 (1655)
T PLN02980 1429 ELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD--------KIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH--------hhCEEEEECCC
Confidence 3445555555543 234689999999999877776654322 36777776653
No 53
>PRK10566 esterase; Provisional
Probab=96.98 E-value=0.0026 Score=57.29 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccc-cchhhhccccccccccccCCCCCcc--cCh-HH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE-ANMLFLETPIGVGFSYSKDASSYQG--VGD-KI 149 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~--~~~-~~ 149 (311)
...|+||+++|++|.... ...+ ...+.+. .+++.+|.| |.|-|+......... ..+ ..
T Consensus 25 ~~~p~vv~~HG~~~~~~~-~~~~----------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLV-YSYF----------------AVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CCCCEEEEeCCCCcccch-HHHH----------------HHHHHhCCCEEEEecCC-cccccCCCccccchhhHHHHHHH
Confidence 457999999999887654 2111 1122232 568889988 777654321110000 000 12
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHH
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLAD 190 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 190 (311)
..+++..++ .|+...+....++++|+|+|+||..+-.++.
T Consensus 87 ~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 87 NMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 234443333 4445554455678999999999987765543
No 54
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.94 E-value=0.0017 Score=62.22 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=58.8
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHC----------------CCCC-CCCeEEEeeecc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKF----------------PQYR-NRSLFITGESYA 181 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~f----------------p~~~-~~~~yi~GESYg 181 (311)
-.+|+-+|.| |.|.|-+.........+-+..++|+..+++..-+.. .++. +.|+||+|||.|
T Consensus 74 G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 74 GYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 3678999988 999986542211101233455677777776543310 0222 578999999999
Q ss_pred ccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 182 GHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 182 G~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
|..+-.++..+.+.........++|+++.+|.+.
T Consensus 153 g~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 153 GNIALRLLELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred cHHHHHHHHHhccccccccccccceEEEeccceE
Confidence 9877766655433211011246899988888764
No 55
>PRK07581 hypothetical protein; Validated
Probab=96.94 E-value=0.0042 Score=59.00 Aligned_cols=128 Identities=12% Similarity=0.053 Sum_probs=66.2
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccC
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~ 138 (311)
+..++|.-... ..+...|+||+.+|++|.+.++. .....||- +. .+...||-+|.| |.|.|-...
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~~-~~~~~~~~------l~------~~~~~vi~~D~~-G~G~S~~~~ 89 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDNE-WLIGPGRA------LD------PEKYFIIIPNMF-GNGLSSSPS 89 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCcccch-hhccCCCc------cC------cCceEEEEecCC-CCCCCCCCC
Confidence 34566543321 13345688887766665544421 11111111 11 235679999999 999885322
Q ss_pred C--CCCcccCh---HHHHHHHHHHHHHHHHHCCCCCCCC-eEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 139 A--SSYQGVGD---KITARDNLVFLKNWFLKFPQYRNRS-LFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 139 ~--~~~~~~~~---~~~a~~~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
. ..|. ..+ ...++++... ...+.. .+.-.+ ..|+|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 90 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~l~~--~lgi~~~~~lvG~S~GG~va~~~a~~~P~~--------V~~Lvli~~ 157 (339)
T PRK07581 90 NTPAPFN-AARFPHVTIYDNVRAQ-HRLLTE--KFGIERLALVVGWSMGAQQTYHWAVRYPDM--------VERAAPIAG 157 (339)
T ss_pred CCCCCCC-CCCCCceeHHHHHHHH-HHHHHH--HhCCCceEEEEEeCHHHHHHHHHHHHCHHH--------Hhhheeeec
Confidence 1 1121 111 1123333321 121211 133356 57899999999888887665543 666676655
Q ss_pred c
Q 021501 213 V 213 (311)
Q Consensus 213 ~ 213 (311)
.
T Consensus 158 ~ 158 (339)
T PRK07581 158 T 158 (339)
T ss_pred C
Confidence 4
No 56
>PRK10985 putative hydrolase; Provisional
Probab=96.93 E-value=0.0041 Score=59.12 Aligned_cols=127 Identities=16% Similarity=0.129 Sum_probs=61.4
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhh-cccCCCCCcCCCCcccccccCcccccchhhhccccccccccccC
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVG-AFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKD 138 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g-~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~ 138 (311)
..+.+++.+....+..+|+||.++|.+|.+..... .+.+ .+... -.+++-.|.+ |.|=|-...
T Consensus 42 ~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~---------~l~~~------G~~v~~~d~r-G~g~~~~~~ 105 (324)
T PRK10985 42 DFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE---------AAQKR------GWLGVVMHFR-GCSGEPNRL 105 (324)
T ss_pred CEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH---------HHHHC------CCEEEEEeCC-CCCCCccCC
Confidence 44444343332334568999999999987532110 0100 01111 1246667876 655332111
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 139 ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 139 ~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
...+ ......++....+++++ +++ ..+++++|+|+||..+-..+.+ ... ...++++++.++-.+
T Consensus 106 ~~~~-~~~~~~D~~~~i~~l~~---~~~---~~~~~~vG~S~GG~i~~~~~~~---~~~---~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 106 HRIY-HSGETEDARFFLRWLQR---EFG---HVPTAAVGYSLGGNMLACLLAK---EGD---DLPLDAAVIVSAPLM 169 (324)
T ss_pred cceE-CCCchHHHHHHHHHHHH---hCC---CCCEEEEEecchHHHHHHHHHh---hCC---CCCccEEEEEcCCCC
Confidence 1122 11222223333334432 343 4689999999999764443332 211 123666555555444
No 57
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.79 E-value=0.0015 Score=61.27 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCCChh-hhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHH
Q 021501 74 ASKPLVLWLNGGPGCS-SLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (311)
Q Consensus 74 ~~~PlilWlnGGPG~S-S~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (311)
.++|++|+++|-.|.. ..+.-.+ .+.+.-....|++.+|.+.+..-.|... ..+....++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l--------------~~~ll~~~~~nVi~vD~~~~~~~~y~~a-----~~~~~~v~~ 94 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDL--------------RKAYLSRGDYNVIVVDWGRGANPNYPQA-----VNNTRVVGA 94 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHH--------------HHHHHhcCCCEEEEEECccccccChHHH-----HHhHHHHHH
Confidence 4579999999977754 2211110 0111111347899999874311111100 012233456
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
++.++|+...+.. .....+++|+|+|.||+.+-.+|.++.+ +++.|+..+|.
T Consensus 95 ~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa 146 (275)
T cd00707 95 ELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCC
Confidence 6666666544432 2334679999999999998888765532 37777777664
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.71 E-value=0.007 Score=57.47 Aligned_cols=126 Identities=18% Similarity=0.149 Sum_probs=78.4
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhcccccccccc-cc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSY-SK 137 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy-~~ 137 (311)
+..++|+-++...++. .+|++++|.=..+.- +--+.+ .+..+ =..++=+|+| |-|.|. ..
T Consensus 19 ~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~---------~l~~~------G~~V~~~D~R-GhG~S~r~~ 79 (298)
T COG2267 19 GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELAD---------DLAAR------GFDVYALDLR-GHGRSPRGQ 79 (298)
T ss_pred CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHH---------HHHhC------CCEEEEecCC-CCCCCCCCC
Confidence 5678888777764443 899999998666544 211100 01111 1357779999 999996 32
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.. . ..+-.....|+..|++..-..+| ..|+||+|||.||..+...+.... -.++|+++-+|++...
T Consensus 80 rg--~-~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~--------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 80 RG--H-VDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP--------PRIDGLVLSSPALGLG 145 (298)
T ss_pred cC--C-chhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC--------ccccEEEEECccccCC
Confidence 21 1 11122334555555555433333 679999999999976555543332 3599999999998876
No 59
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.67 E-value=0.016 Score=55.63 Aligned_cols=135 Identities=21% Similarity=0.228 Sum_probs=87.5
Q ss_pred eeEEEEEEecCCCCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccc-cchhh
Q 021501 46 QQYSGYVTVDEKKQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE-ANMLF 124 (311)
Q Consensus 46 ~~~sGyl~v~~~~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~-anllf 124 (311)
....+|++++. +++++.+. .++..|+++.++|=|=.+=.|--.. | ..... ..++.
T Consensus 21 ~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~----~-------------~la~~~~rviA 76 (322)
T KOG4178|consen 21 AISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI----P-------------GLASRGYRVIA 76 (322)
T ss_pred hcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh----h-------------hhhhcceEEEe
Confidence 34567777653 77777776 6788999999999998775421000 0 11111 46899
Q ss_pred hccccccccccccCC-CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceee
Q 021501 125 LETPIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFN 203 (311)
Q Consensus 125 iDqPvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~in 203 (311)
+|.+ |-|+|-.... +.| +-+..+.|+..+|.. +..++++++||+||+..+=.+|....++-+. .++
T Consensus 77 ~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~--lv~ 143 (322)
T KOG4178|consen 77 PDLR-GYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG--LVT 143 (322)
T ss_pred cCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce--EEE
Confidence 9998 9999965433 334 345567777777763 3356899999999998887777766654221 244
Q ss_pred eeeeEeeCcccCccc
Q 021501 204 LKGIALGNPVLEFAT 218 (311)
Q Consensus 204 LkGi~Igng~~d~~~ 218 (311)
+++... |+..++..
T Consensus 144 ~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 144 LNVPFP-NPKLKPLD 157 (322)
T ss_pred ecCCCC-Ccccchhh
Confidence 444444 55565544
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.66 E-value=0.0031 Score=59.39 Aligned_cols=107 Identities=24% Similarity=0.377 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCCCChhhhhhhccc-CCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFS-ENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~-e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (311)
..-|+++.++|| |.|.+-.+.|. | +. .-. ..-++-+|-. |.|=+...+..+. +-+..++
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~e----------l~--s~~---~~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~K 131 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASE----------LK--SKI---RCRCLALDLR-GHGETKVENEDDL---SLETMSK 131 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHH----------HH--hhc---ceeEEEeecc-ccCccccCChhhc---CHHHHHH
Confidence 345999999988 88777323331 1 10 000 1123668866 9998877665543 4556689
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeC
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGN 211 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Ign 211 (311)
|+...++.+|..-| .+++|+|||.||..+...|..=. .-+|-|+.+.+
T Consensus 132 D~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~-------lpsl~Gl~viD 179 (343)
T KOG2564|consen 132 DFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT-------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh-------chhhhceEEEE
Confidence 99999998885433 46999999999987755442111 13477777765
No 61
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.48 E-value=0.023 Score=55.38 Aligned_cols=129 Identities=13% Similarity=0.039 Sum_probs=69.8
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhh----------cccC-CCCCcCCCCcccccccCcccccchhhhcc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVG----------AFSE-NGPFRPNGQVLVRNEYSWNREANMLFLET 127 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g----------~~~e-~GP~~~~~~~l~~n~~sW~~~anllfiDq 127 (311)
+..++|.-.- ..++...|.||.++|.+|.+.. .. .+.. .||-. + =-.+...|+-+|.
T Consensus 32 ~~~~~y~~~G-~~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~~~~~~~---------~-l~~~~~~vi~~Dl 99 (379)
T PRK00175 32 PVELAYETYG-TLNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDNMVGPGK---------P-IDTDRYFVICSNV 99 (379)
T ss_pred CceEEEEecc-ccCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchhhccCCCC---------c-cCccceEEEeccC
Confidence 3467776432 1123457999999999998864 21 1111 01100 0 0023467999998
Q ss_pred ccccccccccCC------CCC----cccChHHHHHHHHHHHHHHHHHCCCCCCCC-eEEEeeeccccchHHHHHHHHHhc
Q 021501 128 PIGVGFSYSKDA------SSY----QGVGDKITARDNLVFLKNWFLKFPQYRNRS-LFITGESYAGHYIPQLADLMLEFN 196 (311)
Q Consensus 128 PvGtGfSy~~~~------~~~----~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~lA~~i~~~n 196 (311)
|-+.|.|..... ..+ ...+-+..++++.++++ .. .-.+ .+|+|+|+||..+-.+|.+..+
T Consensus 100 ~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~-- 170 (379)
T PRK00175 100 LGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD----AL---GITRLAAVVGGSMGGMQALEWAIDYPD-- 170 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH----Hh---CCCCceEEEEECHHHHHHHHHHHhChH--
Confidence 832454532110 000 01122334444444444 32 2345 5899999999877777765433
Q ss_pred cccceeeeeeeEeeCccc
Q 021501 197 KKEELFNLKGIALGNPVL 214 (311)
Q Consensus 197 ~~~~~inLkGi~Igng~~ 214 (311)
.++++++.|+..
T Consensus 171 ------~v~~lvl~~~~~ 182 (379)
T PRK00175 171 ------RVRSALVIASSA 182 (379)
T ss_pred ------hhhEEEEECCCc
Confidence 378888887643
No 62
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.47 E-value=0.022 Score=54.15 Aligned_cols=129 Identities=18% Similarity=0.151 Sum_probs=77.7
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhcccccccccccc
Q 021501 58 KQRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 58 ~~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~ 137 (311)
.+..+|..+.....+++.+-+|+.++|.=+-+|..+--+.. .+..+. .-+.-+|++ |.|.|-+.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~---------~l~~~g------~~v~a~D~~-GhG~SdGl 99 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK---------RLAKSG------FAVYAIDYE-GHGRSDGL 99 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH---------HHHhCC------CeEEEeecc-CCCcCCCC
Confidence 45678865544444446678999999866555331110000 011111 125679988 99999754
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
. .| ..+-+..++|...|+..+ ....+++..|.|++|||.||..+-.++.+ .. --..|+++..|..
T Consensus 100 ~--~y-i~~~d~~v~D~~~~~~~i-~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~p----~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 100 H--AY-VPSFDLVVDDVISFFDSI-KEREENKGLPRFLFGESMGGAVALLIALK----DP----NFWDGAILVAPMC 164 (313)
T ss_pred c--cc-CCcHHHHHHHHHHHHHHH-hhccccCCCCeeeeecCcchHHHHHHHhh----CC----cccccceeeeccc
Confidence 3 34 345556677777777654 34568889999999999999654444433 11 2366777666653
No 63
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.43 E-value=0.0089 Score=63.79 Aligned_cols=153 Identities=22% Similarity=0.205 Sum_probs=81.8
Q ss_pred eEEEEEeecCC-CC-CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccc-cchhhhcccccccccccc
Q 021501 61 ALFYYFAEAET-DP-ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE-ANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 61 ~lfy~f~e~~~-~p-~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~ 137 (311)
..++++...+. ++ .+-|++++..|||++-+. .+.+ .+..|.+.+... +-++.|| +.|+|+.-..
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-----------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~~ 575 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-----------SVDWNEVVVSSRGFAVLQVD-GRGSGGYGWD 575 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-----------EecHHHHhhccCCeEEEEEc-CCCcCCcchh
Confidence 44455554433 33 345999999999994333 2222 011233322221 3467888 6688865211
Q ss_pred C-CCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 138 D-ASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 138 ~-~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
- ...+...++ ...+|.....+.+.+.+ ..-..++.|+|.||||- ++..++...++ --+|--+-.+|++|.
T Consensus 576 ~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy----~t~~~l~~~~~---~~fkcgvavaPVtd~ 646 (755)
T KOG2100|consen 576 FRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGY----LTLKLLESDPG---DVFKCGVAVAPVTDW 646 (755)
T ss_pred HHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHH----HHHHHhhhCcC---ceEEEEEEecceeee
Confidence 0 011101111 23566666666666655 33445699999999994 45555554321 235665778899887
Q ss_pred cccccchhhhhhhcCCCCHHH
Q 021501 217 ATDFNSRAEFFWSHGLISDAT 237 (311)
Q Consensus 217 ~~~~~~~~~~~~~~glI~~~~ 237 (311)
..-...+.+ .++|+-++..
T Consensus 647 ~~yds~~te--rymg~p~~~~ 665 (755)
T KOG2100|consen 647 LYYDSTYTE--RYMGLPSEND 665 (755)
T ss_pred eeecccccH--hhcCCCcccc
Confidence 733222222 2256655443
No 64
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.41 E-value=0.034 Score=53.86 Aligned_cols=137 Identities=16% Similarity=0.198 Sum_probs=82.0
Q ss_pred CCceEEEEEeecCC-CC-CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhccccccccc
Q 021501 58 KQRALFYYFAEAET-DP-ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFS 134 (311)
Q Consensus 58 ~~~~lfy~f~e~~~-~p-~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfS 134 (311)
....++-+.+.... .+ ..+|++||++||=-|-+. - .. | ...+-.++. +.++.+-| .++|-
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S-~-~~----~-------~y~~~~~~~a~~~~~vvv----SVdYR 132 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGS-A-NS----P-------AYDSFCTRLAAELNCVVV----SVDYR 132 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCC-C-CC----c-------hhHHHHHHHHHHcCeEEE----ecCcc
Confidence 34567777666554 33 688999999999666442 0 00 0 011111222 33444433 45555
Q ss_pred cccCCCCCcccChHHHHHHHHHHHHH-HHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 135 YSKDASSYQGVGDKITARDNLVFLKN-WFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 135 y~~~~~~~~~~~~~~~a~~~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
-... ..+. ..-++.-..+.-++++ |.+.+-.++ .++|+|.|-||-.+-.+|+++.+.. ...+.++|.++.-|+
T Consensus 133 LAPE-h~~P-a~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~--~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 133 LAPE-HPFP-AAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK--LSKPKIKGQILIYPF 206 (336)
T ss_pred cCCC-CCCC-ccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc--CCCcceEEEEEEecc
Confidence 4322 2221 1112222334445554 888776654 3999999999999999999998753 224789999999998
Q ss_pred cCcc
Q 021501 214 LEFA 217 (311)
Q Consensus 214 ~d~~ 217 (311)
+...
T Consensus 207 ~~~~ 210 (336)
T KOG1515|consen 207 FQGT 210 (336)
T ss_pred cCCC
Confidence 7644
No 65
>PLN02442 S-formylglutathione hydrolase
Probab=96.36 E-value=0.017 Score=54.03 Aligned_cols=56 Identities=18% Similarity=0.158 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+++...+.+++.. ....+++|+|+|+||+-+-.+|.+ ... .+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~----~p~----~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLK----NPD----KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHh----Cch----hEEEEEEECCccCcc
Confidence 34444555555543 345679999999999755444432 111 277888899988754
No 66
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.33 E-value=0.0099 Score=55.22 Aligned_cols=79 Identities=19% Similarity=0.172 Sum_probs=51.0
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
.+++-+|.| |.|-|.... . +-+...+|+.++++.+-+..|.+ .++.++|+|.||..+-.+|. ..
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~---~---~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~--- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN---L---GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----AD--- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC---C---CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hC---
Confidence 578999998 999875321 1 12234556666666544445543 46999999999965444432 11
Q ss_pred ceeeeeeeEeeCcccCc
Q 021501 200 ELFNLKGIALGNPVLEF 216 (311)
Q Consensus 200 ~~inLkGi~Igng~~d~ 216 (311)
-.++|+++.||++..
T Consensus 122 --~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 --LRVAGLVLLNPWVRT 136 (274)
T ss_pred --CCccEEEEECCccCC
Confidence 248999999998753
No 67
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.31 E-value=0.0087 Score=59.99 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=49.7
Q ss_pred ccchhhhccccccccc-cccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcc
Q 021501 119 EANMLFLETPIGVGFS-YSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK 197 (311)
Q Consensus 119 ~anllfiDqPvGtGfS-y~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 197 (311)
..||+-+|.| |-|-| |. .. ..+....|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~-~a----~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p---- 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYP-TS----AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK---- 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCc-cc----cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC----
Confidence 3799999998 44433 21 11 1123456677777776443332 344578999999999998777765321
Q ss_pred ccceeeeeeeEeeCcc
Q 021501 198 KEELFNLKGIALGNPV 213 (311)
Q Consensus 198 ~~~~inLkGi~Igng~ 213 (311)
-.+..|++.+|.
T Consensus 142 ----~rV~rItgLDPA 153 (442)
T TIGR03230 142 ----HKVNRITGLDPA 153 (442)
T ss_pred ----cceeEEEEEcCC
Confidence 136677777664
No 68
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.82 E-value=0.031 Score=49.56 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=65.5
Q ss_pred EEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-ccchhhhccccccccccccCCCCCcccChHHHHHHHHH
Q 021501 78 LVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (311)
Q Consensus 78 lilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (311)
.|+++.+|=|.++....+.. ...+ ..++..|+.| |-+ . .... ..+-++.|+.+.+
T Consensus 2 ~lf~~p~~gG~~~~y~~la~-----------------~l~~~~~~v~~i~~~-~~~--~--~~~~--~~si~~la~~y~~ 57 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLAR-----------------ALPDDVIGVYGIEYP-GRG--D--DEPP--PDSIEELASRYAE 57 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHH-----------------HHTTTEEEEEEECST-TSC--T--TSHE--ESSHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHH-----------------hCCCCeEEEEEEecC-CCC--C--CCCC--CCCHHHHHHHHHH
Confidence 57888988786655222210 1111 3568888877 444 1 1111 2345566777666
Q ss_pred HHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
.|+. ..| ..|++|+|+|+||..+=.+|++|.++. .....+++.++..
T Consensus 58 ~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G-----~~v~~l~liD~~~ 104 (229)
T PF00975_consen 58 AIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAG-----EEVSRLILIDSPP 104 (229)
T ss_dssp HHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT------SESEEEEESCSS
T ss_pred Hhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhh-----hccCceEEecCCC
Confidence 6654 344 239999999999999999999998863 4578888888643
No 69
>PLN00021 chlorophyllase
Probab=95.76 E-value=0.014 Score=55.89 Aligned_cols=115 Identities=14% Similarity=0.052 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHH
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (311)
....|+|+|++|+.+.+..+..++ + .+. +| -..++.+|.+ | ++.. .. ..+-+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~-~---------~La----s~--G~~VvapD~~-g--~~~~---~~---~~~i~d~~ 103 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLL-Q---------HIA----SH--GFIVVAPQLY-T--LAGP---DG---TDEIKDAA 103 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHH-H---------HHH----hC--CCEEEEecCC-C--cCCC---Cc---hhhHHHHH
Confidence 356799999999976654421111 0 010 11 1346667755 2 3211 11 11222345
Q ss_pred HHHHHHHHHHHH----CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 153 DNLVFLKNWFLK----FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 153 ~~~~fL~~f~~~----fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
+..+++.+-++. ..+...++++|+|+|.||..+-.+|....+... ...+++++..+++..
T Consensus 104 ~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~---~~~v~ali~ldPv~g 167 (313)
T PLN00021 104 AVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSL---PLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccccc---ccceeeEEeeccccc
Confidence 555555543322 112334679999999999887777755443211 145788887777643
No 70
>PRK10162 acetyl esterase; Provisional
Probab=95.70 E-value=0.031 Score=53.20 Aligned_cols=63 Identities=8% Similarity=0.004 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+.+.++++.+.-+.+. ...+++.|+|+|.||+.+-.+|..+.+.... ...++|+++..|++|.
T Consensus 135 ~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~--~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQID--CGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCCC--ccChhheEEECCccCC
Confidence 3334444443333321 2346799999999999998888777654211 2457899999998875
No 71
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.51 E-value=0.021 Score=56.68 Aligned_cols=79 Identities=22% Similarity=0.201 Sum_probs=51.3
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
.++|-+|-| |+|+|.... + +.| ...+...+..|+..-|+....++-++|-|.||.|++.+|..=.+
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l--~~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~----- 284 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---L--TQD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP----- 284 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S---S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT-----
T ss_pred CEEEEEccC-CCcccccCC---C--CcC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc-----
Confidence 368999999 999984211 1 111 23456677778888999988899999999999999998843222
Q ss_pred ceeeeeeeEeeCcccC
Q 021501 200 ELFNLKGIALGNPVLE 215 (311)
Q Consensus 200 ~~inLkGi~Igng~~d 215 (311)
.|||++.-.|.++
T Consensus 285 ---RlkavV~~Ga~vh 297 (411)
T PF06500_consen 285 ---RLKAVVALGAPVH 297 (411)
T ss_dssp ---T-SEEEEES---S
T ss_pred ---ceeeEeeeCchHh
Confidence 3888776666544
No 72
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.47 E-value=0.039 Score=56.56 Aligned_cols=129 Identities=18% Similarity=0.155 Sum_probs=72.1
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhcccccccccccc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~ 137 (311)
+..++...+.... ....|+||.++|-...+....+. + . ....-|. +-..++-+|.+ |.|.|-+.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~--~----~-------~~~~~l~~~Gy~vv~~D~R-G~g~S~g~ 70 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGL--D----K-------TEPAWFVAQGYAVVIQDTR-GRGASEGE 70 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcccc--c----c-------ccHHHHHhCCcEEEEEecc-ccccCCCc
Confidence 4566654443322 34679999999654332210000 0 0 0011122 23578899977 99998653
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.. .+ + ...++|..++++ |..+.| +...++.++|+||||..+-.+|. ... -.|++++..++..|..
T Consensus 71 ~~-~~---~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~----~~~----~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 71 FD-LL---G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAV----LQP----PALRAIAPQEGVWDLY 135 (550)
T ss_pred eE-ec---C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhc----cCC----CceeEEeecCcccchh
Confidence 21 11 1 234556655554 666655 34468999999999965444432 111 2489998888876643
No 73
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.42 E-value=0.12 Score=49.19 Aligned_cols=124 Identities=17% Similarity=0.196 Sum_probs=64.9
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccc-----hhhhcc------c
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREAN-----MLFLET------P 128 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~an-----llfiDq------P 128 (311)
...-||++.-...++..||||.|+|+=|..+- . .+-..|++.|. |+|-|+ |
T Consensus 45 ~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~-----------------~~~sg~d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 45 LKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-Q-----------------LHGTGWDALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred CccceEEEcCCCCCCCCCEEEEEecCCCChHH-h-----------------hcccchhhhhcccCcEEECcCccccccCC
Confidence 44556777666667788999999998777654 1 12234555443 344331 2
Q ss_pred cccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeE
Q 021501 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA 208 (311)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~ 208 (311)
-+.|-++...+. ..+..++..+.+.+..-..+| ......+||+|-|-||..+-.++.. .++ -+.+++
T Consensus 107 ~~~~~~~~p~~~----~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~---~p~-----~faa~A 173 (312)
T COG3509 107 NGCGNWFGPADR----RRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACE---YPD-----IFAAIA 173 (312)
T ss_pred CcccccCCcccc----cCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhc---Ccc-----ccccee
Confidence 233333321110 111122333333333333333 2344579999999999765554432 221 155666
Q ss_pred eeCccc
Q 021501 209 LGNPVL 214 (311)
Q Consensus 209 Igng~~ 214 (311)
+..|..
T Consensus 174 ~VAg~~ 179 (312)
T COG3509 174 PVAGLL 179 (312)
T ss_pred eeeccc
Confidence 665554
No 74
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.42 E-value=0.12 Score=49.57 Aligned_cols=132 Identities=16% Similarity=0.077 Sum_probs=66.4
Q ss_pred CceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhh--------cccC-CCCCcCCCCcccccccCcccccchhhhcccc
Q 021501 59 QRALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVG--------AFSE-NGPFRPNGQVLVRNEYSWNREANMLFLETPI 129 (311)
Q Consensus 59 ~~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g--------~~~e-~GP~~~~~~~l~~n~~sW~~~anllfiDqPv 129 (311)
+..++|.-.... +....|.||+++|=+|.+-. .. .+.. .||- ..--.+...|+-+|.|
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~-~~~~~~~~~~~w~~~~~~~----------~~l~~~~~~vi~~D~~- 81 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHV-AGYHDDGDPGWWDDLIGPG----------RAIDTDRYFVVCSNVL- 81 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhh-cccCCCCCCCchhhccCCC----------CCcCCCceEEEEecCC-
Confidence 456777544221 12346899999998886532 11 1100 0100 0001234579999988
Q ss_pred c--cccccccC--CC--CCcccChHHHHHHHHHHHHHHHHHCCCCCCCC-eEEEeeeccccchHHHHHHHHHhcccccee
Q 021501 130 G--VGFSYSKD--AS--SYQGVGDKITARDNLVFLKNWFLKFPQYRNRS-LFITGESYAGHYIPQLADLMLEFNKKEELF 202 (311)
Q Consensus 130 G--tGfSy~~~--~~--~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~lA~~i~~~n~~~~~i 202 (311)
| .|-|-..+ .. .+.......+.+++.+.+..+.+.. .-.+ ++|+|+|+||..+-.+|..-.+
T Consensus 82 G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~-------- 150 (351)
T TIGR01392 82 GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPE-------- 150 (351)
T ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChH--------
Confidence 7 44332110 00 1100000112333344444444332 2345 9999999999877766655322
Q ss_pred eeeeeEeeCccc
Q 021501 203 NLKGIALGNPVL 214 (311)
Q Consensus 203 nLkGi~Igng~~ 214 (311)
.++++++.++..
T Consensus 151 ~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 RVRAIVVLATSA 162 (351)
T ss_pred hhheEEEEccCC
Confidence 377888877643
No 75
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.41 E-value=0.021 Score=50.51 Aligned_cols=117 Identities=14% Similarity=0.114 Sum_probs=66.0
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
..|+.+|.+-+.||+..-..... ........+|+.++++.. ...+.....++.|+|.||||+.+-.++. ...
T Consensus 15 y~v~~~~~rGs~g~g~~~~~~~~-~~~~~~~~~D~~~~i~~l-~~~~~iD~~ri~i~G~S~GG~~a~~~~~---~~~--- 86 (213)
T PF00326_consen 15 YAVLVPNYRGSGGYGKDFHEAGR-GDWGQADVDDVVAAIEYL-IKQYYIDPDRIGIMGHSYGGYLALLAAT---QHP--- 86 (213)
T ss_dssp -EEEEEE-TTSSSSHHHHHHTTT-TGTTHHHHHHHHHHHHHH-HHTTSEEEEEEEEEEETHHHHHHHHHHH---HTC---
T ss_pred EEEEEEcCCCCCccchhHHHhhh-ccccccchhhHHHHHHHH-hccccccceeEEEEcccccccccchhhc---ccc---
Confidence 46888998877777753211111 111234566666666544 4444555677999999999987665554 121
Q ss_pred ceeeeeeeEeeCcccCccccccc---hhh-hhhhcCCC--CHHHHHHHHHhcc
Q 021501 200 ELFNLKGIALGNPVLEFATDFNS---RAE-FFWSHGLI--SDATYTMFTSFCN 246 (311)
Q Consensus 200 ~~inLkGi~Igng~~d~~~~~~~---~~~-~~~~~glI--~~~~~~~~~~~C~ 246 (311)
-.++.++.++|.+|+...... +.. -....+.. +.+.++.+.....
T Consensus 87 --~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 137 (213)
T PF00326_consen 87 --DRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISP 137 (213)
T ss_dssp --CGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGG
T ss_pred --eeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccc
Confidence 237889999999998765433 222 11122332 5566666655443
No 76
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.21 E-value=0.07 Score=48.70 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=31.6
Q ss_pred HHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 160 NWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 160 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+.+........+++|++|.|-||..+-.++....+ -+.++++.+|..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD--------LFAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc--------cceEEEeecccc
Confidence 33333335566789999999999776666654433 267778777753
No 77
>PRK10115 protease 2; Provisional
Probab=95.17 E-value=0.11 Score=55.05 Aligned_cols=137 Identities=14% Similarity=0.081 Sum_probs=70.2
Q ss_pred CCCceEEEEEeecCC--CCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccc-hhhhcccccccc
Q 021501 57 KKQRALFYYFAEAET--DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREAN-MLFLETPIGVGF 133 (311)
Q Consensus 57 ~~~~~lfy~f~e~~~--~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~an-llfiDqPvGtGf 133 (311)
..|..+-.|++-... .....|++|+.+||||.+.. -++..+ -.+|.+..= +++..-.=|+||
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~--------------~~~l~~rG~~v~~~n~RGs~g~ 488 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFS--------------RLSLLDRGFVYAIVHVRGGGEL 488 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHH--------------HHHHHHCCcEEEEEEcCCCCcc
Confidence 344555554443221 23456999999999999864 222111 012333222 222222224444
Q ss_pred cccc-CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 134 SYSK-DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 134 Sy~~-~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
...= ..... . +-..+.+|+.+..+ |+....--...++.|.|-||||.-+ ..++.+.. =.+++++.+.|
T Consensus 489 G~~w~~~g~~-~-~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~----~~~~~~~P----dlf~A~v~~vp 557 (686)
T PRK10115 489 GQQWYEDGKF-L-KKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLM----GVAINQRP----ELFHGVIAQVP 557 (686)
T ss_pred CHHHHHhhhh-h-cCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHH----HHHHhcCh----hheeEEEecCC
Confidence 4210 00000 0 00123455555554 3334443345679999999999643 33332211 13899999999
Q ss_pred ccCcccc
Q 021501 213 VLEFATD 219 (311)
Q Consensus 213 ~~d~~~~ 219 (311)
++|....
T Consensus 558 ~~D~~~~ 564 (686)
T PRK10115 558 FVDVVTT 564 (686)
T ss_pred chhHhhh
Confidence 9998754
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.72 E-value=0.19 Score=46.84 Aligned_cols=118 Identities=22% Similarity=0.291 Sum_probs=70.4
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCC----CCcccChHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDAS----SYQGVGDKITA 151 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~----~~~~~~~~~~a 151 (311)
+++++|+-|-||.... +--|.+ .|..+ .+....++=+.. .|+|...... .....+-+++.
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~---------~L~~~---l~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS---------ALYEK---LNPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH---------HHHHh---CCCCCeeEEecC---CCCcCCcccccccCCCCccCHHHHH
Confidence 6899999999999887 322211 01111 022334444442 3565543321 11123556677
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
+.-.+|++++....+ ..+.+++|+|||-|+ .++.+++++.. ....+++++++.=|.+.
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~-~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP-DLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc-ccCCceeEEEEeCCccc
Confidence 888899999887654 236789999999987 45666666543 11356777666655543
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.68 E-value=0.22 Score=49.37 Aligned_cols=110 Identities=24% Similarity=0.342 Sum_probs=70.8
Q ss_pred CCCCCEEEEEcCCCChhhhh-----hhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccCh
Q 021501 73 PASKPLVLWLNGGPGCSSLG-----VGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGD 147 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~-----~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~ 147 (311)
..++|+++.+.|=.|.|.-- ....++.| |+ ++-. .+-|.|-|--+++.-| .-+.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r------------------~VVf-N~RG~~g~~LtTpr~f-~ag~ 180 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR------------------VVVF-NHRGLGGSKLTTPRLF-TAGW 180 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE------------------EEEE-CCCCCCCCccCCCcee-ecCC
Confidence 46789999999999988540 11223333 22 2222 2558888876666555 3455
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
.++-+.+.++++ ++|| .+++|.+|.|+||.. +.+++-+..++. -=..|++|-|||-
T Consensus 181 t~Dl~~~v~~i~---~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~~--~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 181 TEDLREVVNHIK---KRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDNT--PLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHH---HhCC---CCceEEEEecchHHH---HHHHhhhccCCC--CceeEEEEeccch
Confidence 555555555555 4777 579999999999964 566676654332 2367788889874
No 80
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.65 E-value=0.04 Score=44.71 Aligned_cols=94 Identities=20% Similarity=0.277 Sum_probs=54.9
Q ss_pred EEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccc-cchhhhccccccccccccCCCCCcccChHHHHHHHHH
Q 021501 78 LVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNRE-ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (311)
Q Consensus 78 lilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (311)
+||+++|+.|.... +..+.+ .+.+. .+++.+|.| +.|-+. ....++++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~----------------~l~~~G~~v~~~~~~-~~~~~~-----------~~~~~~~~~~ 51 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE----------------ALAEQGYAVVAFDYP-GHGDSD-----------GADAVERVLA 51 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH----------------HHHHTTEEEEEESCT-TSTTSH-----------HSHHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHH----------------HHHHCCCEEEEEecC-CCCccc-----------hhHHHHHHHH
Confidence 58999999876554 222211 12222 456777776 555441 1113333333
Q ss_pred HHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
.+. +..+ ..++++++|+|.||..+..++.+- -.+++++..+|+.
T Consensus 52 ~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~---------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 52 DIR---AGYP--DPDRIILIGHSMGGAIAANLAARN---------PRVKAVVLLSPYP 95 (145)
T ss_dssp HHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS---------TTESEEEEESESS
T ss_pred HHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc---------cceeEEEEecCcc
Confidence 332 3333 457899999999998766665522 2388888888853
No 81
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.48 E-value=0.27 Score=45.14 Aligned_cols=122 Identities=21% Similarity=0.331 Sum_probs=75.2
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCC
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA 139 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~ 139 (311)
-.+.=|.+.++ +++|+++.+++--|- +|-+.- ...... -+-..||+-+|-. |.|-|.+.+.
T Consensus 65 vtL~a~~~~~E---~S~pTlLyfh~NAGN----mGhr~~------i~~~fy-----~~l~mnv~ivsYR-GYG~S~Gsps 125 (300)
T KOG4391|consen 65 VTLDAYLMLSE---SSRPTLLYFHANAGN----MGHRLP------IARVFY-----VNLKMNVLIVSYR-GYGKSEGSPS 125 (300)
T ss_pred eeEeeeeeccc---CCCceEEEEccCCCc----ccchhh------HHHHHH-----HHcCceEEEEEee-ccccCCCCcc
Confidence 34553444443 389999999987554 232211 000000 1224678888876 9998876543
Q ss_pred CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 140 SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 140 ~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
.. +-..+++.. .+++-.+|...++++++.|.|-||.-+-.+|.+-.+ .+.++++-|-.++-
T Consensus 126 E~----GL~lDs~av----ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 126 EE----GLKLDSEAV----LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLSI 186 (300)
T ss_pred cc----ceeccHHHH----HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--------heeeeeeechhccc
Confidence 21 111223222 344557888889999999999999887777765544 37888888877653
No 82
>PLN02872 triacylglycerol lipase
Probab=93.82 E-value=0.5 Score=46.74 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-ccchhhhccccccccccccC-----CCCCcccCh
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-EANMLFLETPIGVGFSYSKD-----ASSYQGVGD 147 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-~anllfiDqPvGtGfSy~~~-----~~~~~~~~~ 147 (311)
..+|.|+.++|..++|..|. . ++|-.. + .+-..+ -.+|.-.|.+ |.|+|+... ...++..+-
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~-~---~~~~~s----l---a~~La~~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~ 139 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWF-L---NSPEQS----L---GFILADHGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSW 139 (395)
T ss_pred CCCCeEEEeCccccccccee-e---cCcccc----h---HHHHHhCCCCccccccc-ccccccCCCCCCccchhccCCcH
Confidence 45789999999988887632 1 122110 0 000111 2367777877 888886422 111111233
Q ss_pred HHHH-HHHHHHHHHHHHHCCCCCCCCeEEEeeeccccch
Q 021501 148 KITA-RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYI 185 (311)
Q Consensus 148 ~~~a-~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 185 (311)
++.| .|+-++++...+.. .++++++|+|.||..+
T Consensus 140 ~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 140 QELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred HHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 3445 57767766554332 3689999999999644
No 83
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=93.73 E-value=0.22 Score=49.37 Aligned_cols=97 Identities=19% Similarity=0.120 Sum_probs=55.6
Q ss_pred cchhhhccccccccccccCC---CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhc
Q 021501 120 ANMLFLETPIGVGFSYSKDA---SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFN 196 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~---~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 196 (311)
|-|+++|.. --|-|..... ....-.+.+++-+|+..|++.+-.++....+.|+.++|-||||.. |..+...-
T Consensus 60 a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~L----aaw~r~ky 134 (434)
T PF05577_consen 60 ALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGAL----AAWFRLKY 134 (434)
T ss_dssp EEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHH----HHHHHHH-
T ss_pred CcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHH----HHHHHhhC
Confidence 457888876 6677753211 111113567888999999999887777667789999999999964 43333211
Q ss_pred cccceeeeeeeEeeCcccCccccccchhh
Q 021501 197 KKEELFNLKGIALGNPVLEFATDFNSRAE 225 (311)
Q Consensus 197 ~~~~~inLkGi~Igng~~d~~~~~~~~~~ 225 (311)
. . -+.|.+--++.+....++..|.+
T Consensus 135 P---~-~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 135 P---H-LFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp T---T-T-SEEEEET--CCHCCTTTHHHH
T ss_pred C---C-eeEEEEeccceeeeecccHHHHH
Confidence 1 1 25676767777766655544433
No 84
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=93.72 E-value=0.22 Score=47.93 Aligned_cols=96 Identities=22% Similarity=0.267 Sum_probs=56.2
Q ss_pred CCCCEEEEEcC-CCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHH
Q 021501 74 ASKPLVLWLNG-GPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITAR 152 (311)
Q Consensus 74 ~~~PlilWlnG-GPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~ 152 (311)
.++|-|+.++| |-++.+- .-.. .+.++....-++=||-| |-|+|-..+... .=+++
T Consensus 56 ~~~~pvlllHGF~~~~~~w-~~~~---------------~~L~~~~~~~v~aiDl~-G~g~~s~~~~~~------~y~~~ 112 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-RRVV---------------PLLSKAKGLRVLAIDLP-GHGYSSPLPRGP------LYTLR 112 (326)
T ss_pred CCCCcEEEeccccCCcccH-hhhc---------------cccccccceEEEEEecC-CCCcCCCCCCCC------ceehh
Confidence 47788999997 3233221 1111 12233333457789988 766432222211 12345
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
+..+-++.|+.. +...+++|+|+||||..+-.+|....+.
T Consensus 113 ~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 113 ELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred HHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 555666666654 3356799999999998888888775553
No 85
>PRK11460 putative hydrolase; Provisional
Probab=93.71 E-value=0.29 Score=44.43 Aligned_cols=52 Identities=6% Similarity=-0.073 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+.++++.+.++. ....++++|+|.|.||..+-.++.. ..+ .+.+++..+|.+
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~----~~~----~~~~vv~~sg~~ 138 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKA----EPG----LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHh----CCC----cceEEEEecccc
Confidence 334444333332 3445679999999999876555432 111 245566666654
No 86
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=93.63 E-value=1.3 Score=41.60 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=37.9
Q ss_pred CCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccc
Q 021501 169 RNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 169 ~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~ 218 (311)
..+++.++|+|-||+.+..+|....+.. ....++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~----~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG----LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC----CCCceEEEEEecccCCcc
Confidence 3567999999999999999998887752 245788899999998875
No 87
>PRK11071 esterase YqiA; Provisional
Probab=93.14 E-value=0.14 Score=45.16 Aligned_cols=47 Identities=23% Similarity=0.357 Sum_probs=30.8
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+++.++.+.. ..++++|+|.|.||.++-.+|.+.. .+ +++.||..+|
T Consensus 49 ~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~-~vl~~~~~~~ 95 (190)
T PRK11071 49 ELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFM----------LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcC----------CC-EEEECCCCCH
Confidence 3444444443 3468999999999988777765421 12 4667887775
No 88
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=92.60 E-value=0.21 Score=45.75 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc-cceeeeeeeEeeCcccCcc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK-EELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~-~~~inLkGi~Igng~~d~~ 217 (311)
+..+.+||+...+.. ...+++|++||.|+..+-..-..+...... ...-.|..|++.+|.+|..
T Consensus 76 ~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 76 GPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 344444444433221 357899999999998777766666655432 1124788999999988864
No 89
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.46 E-value=0.32 Score=48.73 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHH
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 188 (311)
....++++++-...|. -..+++.|+|||+||+-+-.+
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~ 193 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLL 193 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhH
Confidence 4445666666666664 235679999999999754433
No 90
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.53 E-value=0.47 Score=38.74 Aligned_cols=61 Identities=26% Similarity=0.304 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
..+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++.... ..+++-+..|.|-+
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~-~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS-SSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS-TTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc-ccceeeeecCCccc
Confidence 34566777888778887 467999999999999999999888764321 24566677776655
No 91
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.46 E-value=0.43 Score=41.64 Aligned_cols=45 Identities=24% Similarity=0.257 Sum_probs=37.6
Q ss_pred CCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 168 YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 168 ~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+..++++|+|+|-||+.+-.++..+.+... ..++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~----~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGL----PKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTT----CHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcc----cchhhhhcccccccc
Confidence 445689999999999999999988877531 349999999999887
No 92
>PLN02454 triacylglycerol lipase
Probab=90.88 E-value=0.59 Score=46.55 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
...+++...+++..+++|..+ ..++++|||.||-.+-..|..|.+.......+++..+..|.|-+
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 456778889999888888653 35999999999998888888887643211235567778887765
No 93
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.93 E-value=0.99 Score=40.50 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
++....+++..+++| ..+++++|||-||-.+-.+|..+.++. ...+++.+..|.|.+
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCC
Confidence 344556666666666 456999999999999888888877653 124577888888765
No 94
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.76 E-value=0.95 Score=37.96 Aligned_cols=43 Identities=21% Similarity=0.212 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
..+.+...+++...++| ..+++|+|||.||..+-.+|..+.++
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34455556666666666 45799999999999998888888764
No 95
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=88.36 E-value=0.88 Score=45.13 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC-CCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRN-RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
-++|.|...+|..-.+.+|.+.. .|+.+.|.|||| |...|+.+|.- -.+.||+=-++|.-|
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP-------~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP-------WLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc-------cceeEEEecCccccc
Confidence 36799999999988889999975 799999999998 66777766653 345666555555554
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=87.79 E-value=2.1 Score=47.85 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHH
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNL 155 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~ 155 (311)
.|.++.++|+.|.+..+..+... ......++-+|.| |.|-+ .... .+-++.|+++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~-----------------l~~~~~v~~~~~~-g~~~~---~~~~---~~l~~la~~~~ 1123 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY-----------------LDPQWSIYGIQSP-RPDGP---MQTA---TSLDEVCEAHL 1123 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh-----------------cCCCCcEEEEECC-CCCCC---CCCC---CCHHHHHHHHH
Confidence 46688999998877663222211 1122456677877 55533 1111 23445566666
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
+.++. ..+ ..|+.++|+|+||..+-.+|.++.++. ..+..+++.++
T Consensus 1124 ~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-----~~v~~l~l~~~ 1169 (1296)
T PRK10252 1124 ATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-----EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-----CceeEEEEecC
Confidence 66654 222 358999999999999999998886642 23555555554
No 97
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=87.51 E-value=1.1 Score=48.20 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=49.3
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHC--------------CCCCCCCeEEEeeeccccc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKF--------------PQYRNRSLFITGESYAGHY 184 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~f--------------p~~~~~~~yi~GESYgG~y 184 (311)
=..+|++|.+ |+|-|-+... .......+|..+.+. |+... -.|.+-++-++|.||||..
T Consensus 279 GYaVV~~D~R-Gtg~SeG~~~-----~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 279 GFAVVYVSGI-GTRGSDGCPT-----TGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CeEEEEEcCC-CCCCCCCcCc-----cCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 3578999966 9999866422 112223344433333 55532 1244568999999999965
Q ss_pred hHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 185 IPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 185 vP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
.-.+|..-. =.||.|+-..|+.+.
T Consensus 352 ~~~aAa~~p--------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 352 PNAVATTGV--------EGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHhhCC--------CcceEEEeeCCCCcH
Confidence 444442211 248888887776553
No 98
>COG4099 Predicted peptidase [General function prediction only]
Probab=87.25 E-value=5.7 Score=38.31 Aligned_cols=53 Identities=11% Similarity=0.075 Sum_probs=34.2
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.+.+.+=+..+++-..+.+|++|-|-||.-.=+++.+..+- +.+.+...|--|
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf--------FAaa~~iaG~~d 305 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF--------FAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh--------hheeeeecCCCc
Confidence 34455455567777788999999999997655555544432 555555554444
No 99
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=86.77 E-value=0.66 Score=42.87 Aligned_cols=83 Identities=19% Similarity=0.167 Sum_probs=51.4
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
..+|.+|.. |+|-|.+.-... ....++|.++.| +|....| +.+-++-++|.||+|...-..|..-
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~~-----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~------- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDPM-----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR------- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-TT-----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CEEEEECCc-ccccCCCccccC-----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC-------
Confidence 468889966 999997643221 233455555444 4666664 4455799999999998766665411
Q ss_pred ceeeeeeeEeeCcccCccc
Q 021501 200 ELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 200 ~~inLkGi~Igng~~d~~~ 218 (311)
.-.||.|+...+..|...
T Consensus 123 -~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 -PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --TTEEEEEEESE-SBTCC
T ss_pred -CCCceEEEecccCCcccc
Confidence 124999999888777554
No 100
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=86.58 E-value=0.21 Score=48.33 Aligned_cols=103 Identities=16% Similarity=0.257 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCCChh--hhhhhcccCCCCCcCCCCcccccccCcc-cccchhhhccccccccccccCCCCCcccChHH
Q 021501 73 PASKPLVLWLNGGPGCS--SLGVGAFSENGPFRPNGQVLVRNEYSWN-REANMLFLETPIGVGFSYSKDASSYQGVGDKI 149 (311)
Q Consensus 73 p~~~PlilWlnGGPG~S--S~~~g~~~e~GP~~~~~~~l~~n~~sW~-~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 149 (311)
..++|++|.++|=-+.. ..++-. +..+-.... ...||+.||.-.++.-.|... ..+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~-------------~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQD-------------MIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHH-------------HHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHH-------------HHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHH
Confidence 35789999999843333 111110 111111221 357999999876665444211 123345
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
+++.+..||....... .+...+++|+|+|.|+|.+-..++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5666667776655332 2335689999999999988888887766
No 101
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.33 E-value=1.4 Score=41.17 Aligned_cols=78 Identities=18% Similarity=0.251 Sum_probs=53.2
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCC-CCCCeEEEeeeccccchHHHHHHHHHhcc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQY-RNRSLFITGESYAGHYIPQLADLMLEFNK 197 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~ 197 (311)
..|++=.|-- |.|.|-+++. ..+.-.+++..++.|++ ++ +..++.|+|.|-|.. | +-.+..+
T Consensus 88 n~nv~~~DYS-GyG~S~G~ps----E~n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~--~--tv~Lasr-- 150 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPS----ERNLYADIKAVYEWLRN------RYGSPERIILYGQSIGTV--P--TVDLASR-- 150 (258)
T ss_pred cceEEEEecc-cccccCCCcc----cccchhhHHHHHHHHHh------hcCCCceEEEEEecCCch--h--hhhHhhc--
Confidence 4567777855 9999977553 23445566777788876 44 567899999999984 3 2222222
Q ss_pred ccceeeeeeeEeeCcccCcc
Q 021501 198 KEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 198 ~~~~inLkGi~Igng~~d~~ 217 (311)
-.+.|+++-+|.++-.
T Consensus 151 ----~~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 151 ----YPLAAVVLHSPFTSGM 166 (258)
T ss_pred ----CCcceEEEeccchhhh
Confidence 1299999999988744
No 102
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=86.03 E-value=2.3 Score=42.83 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHH
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLAD 190 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 190 (311)
...+++.+.+++.++..+ .+++.|+|||.||..+-.++.
T Consensus 143 ~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 143 ETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 456778888888887655 578999999999977655543
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=86.00 E-value=1.3 Score=39.32 Aligned_cols=43 Identities=23% Similarity=0.358 Sum_probs=32.4
Q ss_pred CCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccccccc
Q 021501 169 RNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDFNS 222 (311)
Q Consensus 169 ~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~~~~~ 222 (311)
....+.|+|-|.||.|+-.+|.+. +++. ++.||.+.|...+..
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~----------~~~a-vLiNPav~p~~~l~~ 99 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY----------GLPA-VLINPAVRPYELLQD 99 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh----------CCCE-EEEcCCCCHHHHHHH
Confidence 345599999999999988877544 3444 888999998765543
No 104
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=85.96 E-value=6.9 Score=38.03 Aligned_cols=111 Identities=29% Similarity=0.420 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCChhhhhh--hcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGV--GAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITA 151 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~--g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a 151 (311)
...|+++-++|==|.|.-.+ |+. | .+... .|. ++-.+-. |.|.+-.....-| ..++++++
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~-~---------~~~~r--g~~----~Vv~~~R-gcs~~~n~~p~~y-h~G~t~D~ 134 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLM-R---------ALSRR--GWL----VVVFHFR-GCSGEANTSPRLY-HSGETEDI 134 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHH-H---------HHHhc--CCe----EEEEecc-cccCCcccCccee-cccchhHH
Confidence 45699999999777764311 111 1 01111 133 4445544 6665543333344 23455444
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 152 RDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 152 ~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
+.+++.+++ ++| .+|+|.+|-|.||. .+|.++.+..+. .....++++-+|+
T Consensus 135 ~~~l~~l~~---~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d--~~~~aa~~vs~P~ 185 (345)
T COG0429 135 RFFLDWLKA---RFP---PRPLYAVGFSLGGN---MLANYLGEEGDD--LPLDAAVAVSAPF 185 (345)
T ss_pred HHHHHHHHH---hCC---CCceEEEEecccHH---HHHHHHHhhccC--cccceeeeeeCHH
Confidence 444444443 565 68999999999994 578888875433 2335666666664
No 105
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=85.30 E-value=1.3 Score=40.10 Aligned_cols=42 Identities=12% Similarity=0.220 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
-.|+.++...|++.+++ +|||.|+|||-|+..+-.|-++..+
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhc
Confidence 45667888888888874 8999999999999876665544443
No 106
>COG0400 Predicted esterase [General function prediction only]
Probab=85.25 E-value=3.2 Score=37.48 Aligned_cols=77 Identities=14% Similarity=0.131 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcccc---ccchhh
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATD---FNSRAE 225 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~~---~~~~~~ 225 (311)
..+..+.+||....+++. ...+++++.|-|-|+.++-.+..... -.++|+++-+|..-+..+ ......
T Consensus 78 ~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~--------~~~~~ail~~g~~~~~~~~~~~~~~~p 148 (207)
T COG0400 78 LETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLP--------GLFAGAILFSGMLPLEPELLPDLAGTP 148 (207)
T ss_pred HHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCc--------hhhccchhcCCcCCCCCccccccCCCe
Confidence 446667788888877764 33578999999999976554432221 248888888887644421 122344
Q ss_pred hhhhcCCCC
Q 021501 226 FFWSHGLIS 234 (311)
Q Consensus 226 ~~~~~glI~ 234 (311)
.+..||--|
T Consensus 149 ill~hG~~D 157 (207)
T COG0400 149 ILLSHGTED 157 (207)
T ss_pred EEEeccCcC
Confidence 555666544
No 107
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=84.83 E-value=1.6 Score=43.09 Aligned_cols=51 Identities=14% Similarity=0.029 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeE-EEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLF-ITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNP 212 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng 212 (311)
.+|+.+.+..+++.. .-+++. ++|+|+||..+-.+|.+-.+. ++++++.++
T Consensus 143 ~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~~--------v~~lv~ia~ 194 (389)
T PRK06765 143 ILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPHM--------VERMIGVIG 194 (389)
T ss_pred HHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHh--------hheEEEEec
Confidence 344444444444432 335675 999999998877777655543 566666644
No 108
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=84.19 E-value=1.8 Score=46.67 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=53.8
Q ss_pred CCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccc-ccc--------CCC--CCcc
Q 021501 76 KPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFS-YSK--------DAS--SYQG 144 (311)
Q Consensus 76 ~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS-y~~--------~~~--~~~~ 144 (311)
.|+|+++||=.|....+..+... +.. +-..++-+|.| |.|-| ... ..+ .|..
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~----------La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~N 511 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGT----------LAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLAYMN 511 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHH----------HHh------CCcEEEEeCCC-CCCccccccccccccccccCccceec
Confidence 58999999877766542211100 110 12346777777 77776 220 000 1100
Q ss_pred --------cChHHHHHHHHHHHHHHH---------HHCCCCCCCCeEEEeeeccccchHHHHH
Q 021501 145 --------VGDKITARDNLVFLKNWF---------LKFPQYRNRSLFITGESYAGHYIPQLAD 190 (311)
Q Consensus 145 --------~~~~~~a~~~~~fL~~f~---------~~fp~~~~~~~yi~GESYgG~yvP~lA~ 190 (311)
.+-.+.+.|++......- ..+..+...|+++.|||.||.....++.
T Consensus 512 l~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 512 LASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 123455666654433321 1223355679999999999998877763
No 109
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.14 E-value=2.7 Score=41.85 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=23.2
Q ss_pred CCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 171 RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 171 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
....|+|.|+||.-+-.+|..-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccce
Confidence 458999999999765444433222 266677777654
No 110
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=83.62 E-value=2.2 Score=38.25 Aligned_cols=63 Identities=13% Similarity=0.242 Sum_probs=49.9
Q ss_pred cChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 145 VGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 145 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
.+-+++|.|+.+.++.+.++ ++.+++.|+|-|+|.-.+|.+..+|....+. .++++++..+-.
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~----~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA----RVAQVVLLSPST 107 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh----heeEEEEeccCC
Confidence 45678899999999988875 4578899999999999999999998765332 477777776543
No 111
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=83.49 E-value=9.4 Score=38.29 Aligned_cols=64 Identities=22% Similarity=0.346 Sum_probs=36.5
Q ss_pred ccchhhhcc-------ccccccccccCC-CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchH
Q 021501 119 EANMLFLET-------PIGVGFSYSKDA-SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIP 186 (311)
Q Consensus 119 ~anllfiDq-------PvGtGfSy~~~~-~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 186 (311)
.|-|||+|. |.|.- ||.+.. -.| .+.+|+-.|+.+.| .++++...=+..|+..+|-||||+.+.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy--LtseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGY--LTSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhcc--ccHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHH
Confidence 355777774 55544 332211 122 23455555555544 456665444567999999999995433
No 112
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=82.12 E-value=5.2 Score=33.78 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=45.3
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK 198 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~ 198 (311)
...++-+|.| |.|.+-. . ..+.+..++.....+.. ..+ ..++.++|+|+||..+-.+|..+.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~--~----~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP--L----PASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC-CCCCCCC--C----CCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 3467778866 5554321 1 11223334444444432 233 468999999999999988888887642
Q ss_pred cceeeeeeeEeeCc
Q 021501 199 EELFNLKGIALGNP 212 (311)
Q Consensus 199 ~~~inLkGi~Igng 212 (311)
..++++++.+.
T Consensus 90 ---~~~~~l~~~~~ 100 (212)
T smart00824 90 ---IPPAAVVLLDT 100 (212)
T ss_pred ---CCCcEEEEEcc
Confidence 23566665554
No 113
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.72 E-value=10 Score=35.45 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=61.2
Q ss_pred CEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHH
Q 021501 77 PLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLV 156 (311)
Q Consensus 77 PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~ 156 (311)
|.+|+++++=|.-..+..+-.+.+|- .-++-++.| |.|. . ... ..+-++.|+...+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-----------------~~v~~l~a~-g~~~--~--~~~--~~~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-----------------LPVYGLQAP-GYGA--G--EQP--FASLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-----------------ceeeccccC-cccc--c--ccc--cCCHHHHHHHHHH
Confidence 57889997766543311111122221 235667777 4432 1 111 1234555666666
Q ss_pred HHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.|+ +..|+ -|.+|.|.|+||..+=.+|.++..+-.. ..=++|.+....
T Consensus 57 ~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~-----Va~L~llD~~~~ 104 (257)
T COG3319 57 AIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE-----VAFLGLLDAVPP 104 (257)
T ss_pred HHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe-----EEEEEEeccCCC
Confidence 666 46674 4999999999999999999999876422 344555554443
No 114
>PRK13604 luxD acyl transferase; Provisional
Probab=81.18 E-value=9.6 Score=36.60 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=64.7
Q ss_pred CceEEEEEeecC-CCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhcccccccccccc
Q 021501 59 QRALFYYFAEAE-TDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 59 ~~~lfy~f~e~~-~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~ 137 (311)
+..+.=|+...+ .++..+|+++..+| .|+.....--+ -.+=+.+=.++|-.|.--|.|=|-++
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~---------------A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGL---------------AEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHH---------------HHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 456665666554 34556688888774 34432111011 11122334577888865456877332
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
- .+...+....++....++++ .. ...++.|.|+|.||..+...|. ..+++++++..|..+
T Consensus 83 ~-~~~t~s~g~~Dl~aaid~lk----~~---~~~~I~LiG~SmGgava~~~A~----------~~~v~~lI~~sp~~~ 142 (307)
T PRK13604 83 I-DEFTMSIGKNSLLTVVDWLN----TR---GINNLGLIAASLSARIAYEVIN----------EIDLSFLITAVGVVN 142 (307)
T ss_pred c-ccCcccccHHHHHHHHHHHH----hc---CCCceEEEEECHHHHHHHHHhc----------CCCCCEEEEcCCccc
Confidence 1 11111112223333344444 32 1357999999999976322221 134888899888877
No 115
>PLN02571 triacylglycerol lipase
Probab=80.79 E-value=4.3 Score=40.57 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccc------cceeeeeeeEeeCccc
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKK------EELFNLKGIALGNPVL 214 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~------~~~inLkGi~Igng~~ 214 (311)
..+++...++++.+++|.. ..+++++|||.||-.+-..|..|....-. ...+++..+..|.|-+
T Consensus 206 ar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRV 275 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRV 275 (413)
T ss_pred HHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCc
Confidence 4567788888888888765 34799999999999988888888653110 1124566777777765
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=80.41 E-value=3.4 Score=43.44 Aligned_cols=113 Identities=22% Similarity=0.312 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccccc----------chhhhccccccccccccCC-CCCc
Q 021501 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREA----------NMLFLETPIGVGFSYSKDA-SSYQ 143 (311)
Q Consensus 75 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~a----------nllfiDqPvGtGfSy~~~~-~~~~ 143 (311)
.-|+++.+-||||.- ++.|.++|.+.. =|++||.. |+-- ++..- +...
T Consensus 641 kYptvl~VYGGP~VQ-------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~h-RGlkFE~~ik 699 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQ-------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAH-RGLKFESHIK 699 (867)
T ss_pred CCceEEEEcCCCceE-------------------EeeccccceehhhhhhhhhcceEEEEEcCC-Cccc-cchhhHHHHh
Confidence 469999999999974 345666776642 24788854 3210 01000 0000
Q ss_pred -ccChHHHHHHHHHHHHHHHHHCCCCC-CCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccc
Q 021501 144 -GVGDKITARDNLVFLKNWFLKFPQYR-NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 144 -~~~~~~~a~~~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~ 218 (311)
..+. -.++|=.+-|+-.-++. .|. -..+-|-|.||||. |+...+-+-.+ | ++-.+-|.|++++..
T Consensus 700 ~kmGq-VE~eDQVeglq~Laeq~-gfidmdrV~vhGWSYGGY----LSlm~L~~~P~---I-frvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 700 KKMGQ-VEVEDQVEGLQMLAEQT-GFIDMDRVGVHGWSYGGY----LSLMGLAQYPN---I-FRVAIAGAPVTDWRL 766 (867)
T ss_pred hccCe-eeehhhHHHHHHHHHhc-CcccchheeEeccccccH----HHHHHhhcCcc---e-eeEEeccCcceeeee
Confidence 0000 01222223332211222 232 23588999999994 44444433222 2 555667888887654
No 117
>PF03283 PAE: Pectinacetylesterase
Probab=79.32 E-value=12 Score=36.76 Aligned_cols=127 Identities=23% Similarity=0.289 Sum_probs=67.8
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhh---hhcccCCCCCc-----CCCC-----cccccc--cCcccccchhh
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLG---VGAFSENGPFR-----PNGQ-----VLVRNE--YSWNREANMLF 124 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~---~g~~~e~GP~~-----~~~~-----~l~~n~--~sW~~~anllf 124 (311)
....|++.+.. ....+-+||.|.||=-|.+.. .-..++.|... +... .-..|| +.| |+||
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~w----N~V~ 109 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYNW----NHVF 109 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccccc----cEEE
Confidence 34445555542 345678999999999998751 11123344321 1111 234566 344 5677
Q ss_pred hccccccccccccCCCCCcccChH---HHHHHHHHHHHHHHHH--CCCCCCCCeEEEeeeccccchHHHHHHHHHhc
Q 021501 125 LETPIGVGFSYSKDASSYQGVGDK---ITARDNLVFLKNWFLK--FPQYRNRSLFITGESYAGHYIPQLADLMLEFN 196 (311)
Q Consensus 125 iDqPvGtGfSy~~~~~~~~~~~~~---~~a~~~~~fL~~f~~~--fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 196 (311)
| |--+|=++.-+.... ...+. -....+++++.+++.. +++ ..++.|+|.|.||.=+..-+.++.+.-
T Consensus 110 v--pYC~Gd~~~G~~~~~-~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~l 181 (361)
T PF03283_consen 110 V--PYCDGDSHSGDVEPV-DYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRL 181 (361)
T ss_pred E--EecCCccccCccccc-ccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHh
Confidence 6 555565553222111 00110 1133344444444443 343 356999999999987777777777653
No 118
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.21 E-value=2.6 Score=39.53 Aligned_cols=101 Identities=22% Similarity=0.379 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCccccccc----CcccccchhhhccccccccccccCCCCCcccChHH
Q 021501 74 ASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEY----SWNREANMLFLETPIGVGFSYSKDASSYQGVGDKI 149 (311)
Q Consensus 74 ~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~----sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~ 149 (311)
+++|+++|+-|-||-++. . +|.|- ++..|-- -|+ ..++=-.+.|..+-=+-+....+. .+-+.
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y---~~F~~------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fsL~~ 93 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-Y---TEFAR------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEEI--FSLQD 93 (301)
T ss_pred CCceEEEEecCCCCchhH-H---HHHHH------HHHHhcccccceeE-EeccccccCCcccccccccccccc--cchhh
Confidence 678999999999999766 2 22211 0111110 222 112222333411111111111111 13344
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhc
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFN 196 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n 196 (311)
+.+.=.+|++++. | +++++||.|||=|. .+..+|+..+
T Consensus 94 QV~HKlaFik~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~ 131 (301)
T KOG3975|consen 94 QVDHKLAFIKEYV---P--KDRKIYIIGHSIGA----YMVLQILPSI 131 (301)
T ss_pred HHHHHHHHHHHhC---C--CCCEEEEEecchhH----HHHHHHhhhc
Confidence 5566678888764 3 47889999999985 4556666543
No 119
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=78.10 E-value=23 Score=32.16 Aligned_cols=63 Identities=22% Similarity=0.185 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHC--CCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeE-eeCcccCcc
Q 021501 150 TARDNLVFLKNWFLKF--PQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA-LGNPVLEFA 217 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~-Igng~~d~~ 217 (311)
.++.+.+.++...+.. ..-..+++.|+|||.||.. |+.++...... .-++++|+ ++.|...+.
T Consensus 62 q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv----ar~~l~~~~~~-~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 62 QAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV----ARSALSLPNYD-PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH----HHHHHhccccc-cccEEEEEEEcCCCCCcc
Confidence 4555555555555544 2224678999999999963 33333221111 12345544 666665543
No 120
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=78.01 E-value=3.7 Score=40.09 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=53.8
Q ss_pred CCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccc-----ccchhhhccccccccccccCCCCCcccC
Q 021501 72 DPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNR-----EANMLFLETPIGVGFSYSKDASSYQGVG 146 (311)
Q Consensus 72 ~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~-----~anllfiDqPvGtGfSy~~~~~~~~~~~ 146 (311)
+++++-.+|+.||-=+|=-- ..++ ....+.|.+ .+|++...-| |+|+|.+...
T Consensus 133 ~a~~~RWiL~s~GNg~~~E~-~~~~-------------~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~s------- 190 (365)
T PF05677_consen 133 EAKPQRWILVSNGNGECYEN-RAML-------------DYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPPS------- 190 (365)
T ss_pred CCCCCcEEEEEcCChHHhhh-hhhh-------------ccccHHHHHHHHHcCCcEEEECCC-ccccCCCCCC-------
Confidence 45677899999975333211 1111 112234444 4799999988 9999965331
Q ss_pred hHHHHHHHHHHHHHHHHHCCC-CCCCCeEEEeeeccccchH
Q 021501 147 DKITARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIP 186 (311)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP 186 (311)
-+..+++ ++++.+++..+++ -+.+.+.+.|+|-||....
T Consensus 191 ~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 191 RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 1222222 3455555554432 3457899999999997544
No 121
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=76.65 E-value=13 Score=35.55 Aligned_cols=103 Identities=23% Similarity=0.282 Sum_probs=59.6
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCccccc--chhhhccccccccccccCCCCCcccChHHH
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREA--NMLFLETPIGVGFSYSKDASSYQGVGDKIT 150 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~a--nllfiDqPvGtGfSy~~~~~~~~~~~~~~~ 150 (311)
.+...+|+=++|-||+-== |--+ -++.+.+ .++=|.-| |-|++-......| +..+-
T Consensus 32 gs~~gTVv~~hGsPGSH~D----FkYi--------------~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~---~n~er 89 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHND----FKYI--------------RPPLDEAGIRFIGINYP-GFGFTPGYPDQQY---TNEER 89 (297)
T ss_pred CCCceeEEEecCCCCCccc----hhhh--------------hhHHHHcCeEEEEeCCC-CCCCCCCCccccc---ChHHH
Confidence 4455689999999998521 1000 0222222 24566778 7777644333233 22222
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
..|...+++.- +.+ ..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 90 ----~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~----------~~~g~~lin~~ 136 (297)
T PF06342_consen 90 ----QNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH----------PLHGLVLINPP 136 (297)
T ss_pred ----HHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC----------ccceEEEecCC
Confidence 34555555543 333 5688889999997655555332 36799999875
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=76.63 E-value=1.7 Score=39.79 Aligned_cols=75 Identities=15% Similarity=0.046 Sum_probs=50.9
Q ss_pred ccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEe
Q 021501 130 GVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIAL 209 (311)
Q Consensus 130 GtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~I 209 (311)
.+||-+++.. ..-+++..++.++++--|+.+|.- +.+-+.|||-|.|.+.....++.+ -.+.|+++
T Consensus 102 svgY~l~~q~-----htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~l 167 (270)
T KOG4627|consen 102 SVGYNLCPQV-----HTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLIL 167 (270)
T ss_pred EeccCcCccc-----ccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC-------chHHHHHH
Confidence 4566665432 245677888888888777888754 348889999998876555544322 24788888
Q ss_pred eCcccCccc
Q 021501 210 GNPVLEFAT 218 (311)
Q Consensus 210 gng~~d~~~ 218 (311)
-.|+-+-..
T Consensus 168 ~~GvY~l~E 176 (270)
T KOG4627|consen 168 LCGVYDLRE 176 (270)
T ss_pred HhhHhhHHH
Confidence 888876543
No 123
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=74.85 E-value=10 Score=36.30 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHHHHHHCCC-CCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccc
Q 021501 146 GDKITARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFAT 218 (311)
Q Consensus 146 ~~~~~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~ 218 (311)
+-+.+++++.+.++-+-..... +..+++.|+|||-|-.=+- +++...+.....-.++|+|+-.|+-|.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl---~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVL---HYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHH---HHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHH---HHHhccCccccccceEEEEEeCCCCChhH
Confidence 4456677776666544444322 3457899999999986543 33444332122356999999999888764
No 124
>PRK04940 hypothetical protein; Provisional
Probab=74.07 E-value=7.6 Score=34.46 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=30.6
Q ss_pred CCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcccccc
Q 021501 171 RSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDFN 221 (311)
Q Consensus 171 ~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~~~~ 221 (311)
.++.|+|.|-||.|+-.+|.+. .++ .++.||.+.|...+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~----------g~~-aVLiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC----------GIR-QVIFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH----------CCC-EEEECCCCChHHHHH
Confidence 4789999999999988777653 244 478899999976443
No 125
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=73.09 E-value=10 Score=34.71 Aligned_cols=60 Identities=10% Similarity=0.026 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
.+-++.+.+.++.+.. ..+++.|+|.|-|+..+-...+++.+..... .=+++-+.+||+.
T Consensus 30 ~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 30 AEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-PDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC-cCceEEEEecCCC
Confidence 3445666677776544 4788999999999988888888887743221 1357888999874
No 126
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=72.68 E-value=6.3 Score=37.67 Aligned_cols=52 Identities=12% Similarity=0.055 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+.+++....++.+ ..+++++|+|+||..+-.++... .. .++++++.++.++.
T Consensus 122 ~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~----~~----~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 122 IDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALY----PD----KIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhC----ch----heeeEEEecccccc
Confidence 4444444434443 56899999999998655544321 11 27788877777764
No 127
>PLN02753 triacylglycerol lipase
Probab=72.53 E-value=9.4 Score=39.28 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHCCC--CCCCCeEEEeeeccccchHHHHHHHHHhcc----ccceeeeeeeEeeCccc
Q 021501 148 KITARDNLVFLKNWFLKFPQ--YRNRSLFITGESYAGHYIPQLADLMLEFNK----KEELFNLKGIALGNPVL 214 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~n~----~~~~inLkGi~Igng~~ 214 (311)
....+++...+++..+++|. .....++|+|||.||-.+-..|..|.+..- ....+++.-+..|.|-+
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 34567788888888888763 223579999999999998888888865311 11234566667776655
No 128
>PLN00413 triacylglycerol lipase
Probab=71.11 E-value=6.4 Score=40.00 Aligned_cols=39 Identities=21% Similarity=0.342 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
++...+++.++.+|. .+++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 456778888888884 469999999999988877766653
No 129
>PRK14566 triosephosphate isomerase; Provisional
Probab=69.75 E-value=12 Score=35.13 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.|+++..||++++..........+=|. |||..-|.-+..|... -+++|+.||..-+|+.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC------CCCCeEEechHhcCHH
Confidence 45688899999999875421112223333 9999999999999875 3599999999888764
No 130
>PLN02719 triacylglycerol lipase
Probab=69.65 E-value=11 Score=38.55 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CCCeEEEeeeccccchHHHHHHHHHhcc----ccceeeeeeeEeeCccc
Q 021501 149 ITARDNLVFLKNWFLKFPQYR--NRSLFITGESYAGHYIPQLADLMLEFNK----KEELFNLKGIALGNPVL 214 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvP~lA~~i~~~n~----~~~~inLkGi~Igng~~ 214 (311)
...+++...+++..+.+|... ...++|+|||.||-.+-..|..|.+..- ....+++.-+..|.|-+
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 345677888888888888642 3469999999999998888888876421 11124455566666654
No 131
>PRK14567 triosephosphate isomerase; Provisional
Probab=69.51 E-value=14 Score=34.58 Aligned_cols=61 Identities=18% Similarity=0.283 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.++++..++++++..+-.-....+=|. |||..-|.=+..|.+. -+++|+.||++.+|+.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC------CCCCEEEeehhhhcHH
Confidence 45688889999999876422112223333 9999999999999874 3599999999988754
No 132
>PLN02324 triacylglycerol lipase
Probab=69.41 E-value=12 Score=37.38 Aligned_cols=65 Identities=17% Similarity=0.115 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcc-------ccceeeeeeeEeeCccc
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNK-------KEELFNLKGIALGNPVL 214 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~-------~~~~inLkGi~Igng~~ 214 (311)
..-+++...+++..+++|.. ...++++|||.||-.+-..|..|.+... ....+++.-+..|.|-+
T Consensus 194 SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRV 265 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRI 265 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCc
Confidence 34566778888888888753 2469999999999988888888866311 01124455555666644
No 133
>COG0627 Predicted esterase [General function prediction only]
Probab=68.75 E-value=22 Score=34.23 Aligned_cols=110 Identities=22% Similarity=0.236 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCChhhhhhhcccCCCCCcC--CCCc---ccccccCcccccchhhhccccccccccccC-CCCCcccChH
Q 021501 75 SKPLVLWLNGGPGCSSLGVGAFSENGPFRP--NGQV---LVRNEYSWNREANMLFLETPIGVGFSYSKD-ASSYQGVGDK 148 (311)
Q Consensus 75 ~~PlilWlnGGPG~SS~~~g~~~e~GP~~~--~~~~---l~~n~~sW~~~anllfiDqPvGtGfSy~~~-~~~~~~~~~~ 148 (311)
++.-|+|+.+|..|..- .+...++++- +... ..+...-|....++--|+ |+|.|.|+-.+ ........
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~-- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG-- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC--
Confidence 34446666667787731 2233344432 1111 111122243344444444 78999995322 21100001
Q ss_pred HHHHHHHHHH-----HHHHHHCCCCCC-CCeEEEeeeccccchHHHHHHH
Q 021501 149 ITARDNLVFL-----KNWFLKFPQYRN-RSLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 149 ~~a~~~~~fL-----~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i 192 (311)
..++..|| ..|.+.||.-+. ..-.|+|+|.||+=+-.+|.+-
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~ 173 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH 173 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC
Confidence 12233333 245566764432 3578999999998766666444
No 134
>PLN02408 phospholipase A1
Probab=68.30 E-value=13 Score=36.53 Aligned_cols=62 Identities=18% Similarity=0.076 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
..+++.+-+++..+.+|.. ...++|+|||.||-.+-..|..|....... ..+.-+..|.|-+
T Consensus 180 ~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~~--~~V~v~tFGsPRV 241 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKRA--PMVTVISFGGPRV 241 (365)
T ss_pred HHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCCC--CceEEEEcCCCCc
Confidence 4456777888888888864 245999999999998888888887642111 1234455555544
No 135
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=67.89 E-value=12 Score=34.07 Aligned_cols=36 Identities=28% Similarity=0.444 Sum_probs=26.9
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
.+++++..+.++. +++++|||=||..+-+.|..+.+
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 4666666666653 59999999999888777776544
No 136
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.82 E-value=9 Score=37.67 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=49.0
Q ss_pred cccccccccCCC--CCcccChHHHHHHHHHHHHHHH---HHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceee
Q 021501 129 IGVGFSYSKDAS--SYQGVGDKITARDNLVFLKNWF---LKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFN 203 (311)
Q Consensus 129 vGtGfSy~~~~~--~~~~~~~~~~a~~~~~fL~~f~---~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~in 203 (311)
+-++||+....+ +| .-|.+.++.-...|+..+ .+-+. -.++||..||+|+--+-..-++|.-++.+.....
T Consensus 148 ~pVvFSWPS~g~l~~Y--n~DreS~~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~k 223 (377)
T COG4782 148 VPVVFSWPSRGSLLGY--NYDRESTNYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAK 223 (377)
T ss_pred ceEEEEcCCCCeeeec--ccchhhhhhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhh
Confidence 345666654332 22 234444444334444433 33332 4579999999998766666666665544322355
Q ss_pred eeeeEeeCcccCcc
Q 021501 204 LKGIALGNPVLEFA 217 (311)
Q Consensus 204 LkGi~Igng~~d~~ 217 (311)
++=+++-.|-+|-.
T Consensus 224 i~nViLAaPDiD~D 237 (377)
T COG4782 224 IKNVILAAPDIDVD 237 (377)
T ss_pred hhheEeeCCCCChh
Confidence 77888888887754
No 137
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=67.08 E-value=11 Score=36.51 Aligned_cols=57 Identities=23% Similarity=0.258 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+.+-++.-...+| +..++++|||-||..+...|..|...... ....++-+.-|-|-+
T Consensus 157 ~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~-~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 157 LDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK-TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC-CCCceEEEEecCCCc
Confidence 3444444455667 45699999999999999999999886432 124455555666544
No 138
>PLN02847 triacylglycerol lipase
Probab=65.57 E-value=12 Score=39.20 Aligned_cols=52 Identities=17% Similarity=0.266 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeC
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGN 211 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Ign 211 (311)
+...|++-+..+|.| ++.|+|||.||-.+..++..+.++ .. .-++..+..|-
T Consensus 237 i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~-~~--fssi~CyAFgP 288 (633)
T PLN02847 237 STPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQ-KE--FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcC-CC--CCCceEEEecC
Confidence 334555566778876 499999999999877776665432 21 23455666664
No 139
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=65.44 E-value=81 Score=34.37 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHH---HHHHHCCCCC---CCCeEEEeeeccccc
Q 021501 148 KITARDNLVFLK---NWFLKFPQYR---NRSLFITGESYAGHY 184 (311)
Q Consensus 148 ~~~a~~~~~fL~---~f~~~fp~~~---~~~~yi~GESYgG~y 184 (311)
.++++.+.++++ .-++.-+||+ ...+.|+||||||..
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiV 195 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIV 195 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHH
Confidence 345666665555 4445555666 445999999999964
No 140
>PLN02802 triacylglycerol lipase
Probab=65.11 E-value=14 Score=37.89 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 150 TARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
..+++.+-++++.+++|.. ...++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRV 371 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRV 371 (509)
T ss_pred HHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCc
Confidence 3456777788888877642 24699999999999888888888664322 12344455555543
No 141
>PLN02162 triacylglycerol lipase
Probab=63.82 E-value=12 Score=38.01 Aligned_cols=39 Identities=13% Similarity=0.193 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
.+.+.|++.+.++|. .+++++|||.||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 345666777777875 469999999999877766665554
No 142
>PLN02934 triacylglycerol lipase
Probab=63.30 E-value=10 Score=38.85 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 153 DNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 153 ~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
++...++++.+++|.+ +++++|||-||-.+-..|..|..
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 4567788888888854 69999999999987777766654
No 143
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=63.29 E-value=15 Score=32.39 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCeEEEeeeccccchHHHHHH
Q 021501 149 ITARDNLVFLKNWFLKF-PQYRNRSLFITGESYAGHYIPQLADL 191 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~lA~~ 191 (311)
.-|.++..|+...=..+ | ...+-++|||||+.-+-.-++.
T Consensus 89 ~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 34666667777655555 3 3468999999998765544433
No 144
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=62.73 E-value=19 Score=36.73 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=21.2
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHH
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 188 (311)
++.+++.-+.|--= ...+-|+|||-|++-+-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 35555555555432 2459999999998765443
No 145
>PLN02310 triacylglycerol lipase
Probab=61.10 E-value=19 Score=35.96 Aligned_cols=61 Identities=18% Similarity=0.097 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHCCCC-CCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 151 ARDNLVFLKNWFLKFPQY-RNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
..++.+.+++..+.+++- ....+.|+|||.||-.+-..|..|..... .+++.-+..|.|-+
T Consensus 188 ~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~---~~~v~vyTFGsPRV 249 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIP---DLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCc---CcceeEEEecCCCc
Confidence 355666666666655431 23469999999999988777777654321 23444555555544
No 146
>PLN02761 lipase class 3 family protein
Probab=60.45 E-value=21 Score=36.76 Aligned_cols=66 Identities=15% Similarity=0.112 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHCCCC-C--CCCeEEEeeeccccchHHHHHHHHHhccc-----cceeeeeeeEeeCccc
Q 021501 149 ITARDNLVFLKNWFLKFPQY-R--NRSLFITGESYAGHYIPQLADLMLEFNKK-----EELFNLKGIALGNPVL 214 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvP~lA~~i~~~n~~-----~~~inLkGi~Igng~~ 214 (311)
...+++...++...+.+|.. + ...++++|||.||-.+-..|..|...+-. ...+++.-+..|.|-+
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 34567788888888877532 1 23599999999999888888888653211 1134555666666544
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=60.34 E-value=16 Score=32.82 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
+..++.+.+.|.+..+..+.- .+++.++|||.||.++=.....+.+.
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 345677777777777665543 46899999999999876555555544
No 148
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=59.54 E-value=24 Score=35.86 Aligned_cols=79 Identities=19% Similarity=0.365 Sum_probs=53.5
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccccccch--hhh-hhh--c
Q 021501 156 VFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDFNSR--AEF-FWS--H 230 (311)
Q Consensus 156 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~~~~~~--~~~-~~~--~ 230 (311)
+.++.||.+-|++ -|..|.|-||+=.-..|++..+. ++||+.|.|.++........ ... ... .
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d--------fDGIlAgaPA~~~~~~~~~~~~~~~~~~~~~~ 171 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED--------FDGILAGAPAINWTHLQLAHAWPAQVMYPDPG 171 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh--------cCeEEeCCchHHHHHHHHHhhhhhhhhccCCC
Confidence 5667788887765 69999999999888887777664 99999999998865432211 111 111 3
Q ss_pred CCCCHHHHHHHH----Hhcc
Q 021501 231 GLISDATYTMFT----SFCN 246 (311)
Q Consensus 231 glI~~~~~~~~~----~~C~ 246 (311)
+.++..+++.+. ++|+
T Consensus 172 ~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 172 GYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred CCCCHHHHHHHHHHHHHhcc
Confidence 567777665543 4575
No 149
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=58.10 E-value=10 Score=33.55 Aligned_cols=72 Identities=15% Similarity=0.054 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCccccccc------hh
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFATDFNS------RA 224 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~~~~~~------~~ 224 (311)
++.+.+++....+.. ...++++|.|-|-||..+-.++. +.. -.+.|++..+|++-...+... ..
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l----~~p----~~~~gvv~lsG~~~~~~~~~~~~~~~~~~ 156 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLAL----RYP----EPLAGVVALSGYLPPESELEDRPEALAKT 156 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHH----CTS----STSSEEEEES---TTGCCCHCCHCCCCTS
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHH----HcC----cCcCEEEEeeccccccccccccccccCCC
Confidence 344445555544332 55678999999999966544442 211 258899999998754332221 23
Q ss_pred hhhhhcCC
Q 021501 225 EFFWSHGL 232 (311)
Q Consensus 225 ~~~~~~gl 232 (311)
..++.||-
T Consensus 157 pi~~~hG~ 164 (216)
T PF02230_consen 157 PILIIHGD 164 (216)
T ss_dssp -EEEEEET
T ss_pred cEEEEecC
Confidence 45667764
No 150
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=58.03 E-value=40 Score=34.84 Aligned_cols=85 Identities=9% Similarity=0.069 Sum_probs=47.6
Q ss_pred cchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhcccc
Q 021501 120 ANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKE 199 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~ 199 (311)
.+++-||-+ |-|.|..... -++-..+.+.+++....+.. ...++.++|+|.||..+...+..+......
T Consensus 221 f~V~~iDwr-gpg~s~~~~~------~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~~- 289 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT------FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGDD- 289 (532)
T ss_pred cEEEEEECC-CCCcccccCC------hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCCC-
Confidence 356667766 7676632110 11222233455555544433 357899999999998765533222222101
Q ss_pred ceeeeeeeEeeCcccCcc
Q 021501 200 ELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 200 ~~inLkGi~Igng~~d~~ 217 (311)
-.++++++.+..+|..
T Consensus 290 --~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 290 --KRIKSATFFTTLLDFS 305 (532)
T ss_pred --CccceEEEEecCcCCC
Confidence 1378888887777754
No 151
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.57 E-value=17 Score=33.80 Aligned_cols=64 Identities=14% Similarity=0.089 Sum_probs=41.2
Q ss_pred chhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 121 NMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 121 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
.++=|+-| |-|=-+... . .++-++.|..+...|+. -+..+|+-++|||+||+.+=.+|+++.+.
T Consensus 35 el~avqlP-GR~~r~~ep--~--~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFGEP--L--LTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccCCc--c--cccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 45667767 666333221 1 22334445555444432 35678999999999999999999988775
No 152
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=57.49 E-value=15 Score=33.61 Aligned_cols=91 Identities=19% Similarity=0.146 Sum_probs=54.1
Q ss_pred CEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCCCCCcc---cChHHHHHH
Q 021501 77 PLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQG---VGDKITARD 153 (311)
Q Consensus 77 PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~---~~~~~~a~~ 153 (311)
--||.+-|--||+-.. .+|-.. +-.--.. .+++=||.| |.|-|+.... ++.. ..|.+.|-|
T Consensus 43 ~~iLlipGalGs~~tD------f~pql~-------~l~k~l~-~TivawDPp-GYG~SrPP~R-kf~~~ff~~Da~~avd 106 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTD------FPPQLL-------SLFKPLQ-VTIVAWDPP-GYGTSRPPER-KFEVQFFMKDAEYAVD 106 (277)
T ss_pred ceeEeccccccccccc------CCHHHH-------hcCCCCc-eEEEEECCC-CCCCCCCCcc-cchHHHHHHhHHHHHH
Confidence 3578888888888662 233211 1111111 568899955 9998875432 2211 234455555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHH
Q 021501 154 NLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLML 193 (311)
Q Consensus 154 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 193 (311)
+.++|+ -.+|-|.|.|=||.-+-..|.+-.
T Consensus 107 LM~aLk----------~~~fsvlGWSdGgiTalivAak~~ 136 (277)
T KOG2984|consen 107 LMEALK----------LEPFSVLGWSDGGITALIVAAKGK 136 (277)
T ss_pred HHHHhC----------CCCeeEeeecCCCeEEEEeeccCh
Confidence 555553 467999999999987665554433
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=56.79 E-value=15 Score=34.27 Aligned_cols=65 Identities=22% Similarity=0.233 Sum_probs=35.5
Q ss_pred chhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHH
Q 021501 121 NMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLA 189 (311)
Q Consensus 121 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 189 (311)
.||-.|-. |.|=|.....+.....--+-.-.|+-..|..--+.-| ..|.|.+|||+||+-.-.++
T Consensus 59 ~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 59 EVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred eEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 46666755 8887765433211000112223444444433222233 57899999999999765554
No 154
>PLN02429 triosephosphate isomerase
Probab=56.01 E-value=30 Score=33.45 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.++.+.+++++|+.. +.+-....+-|. |||-.-|.-+.+|... -+++|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC------CCCCEEEeecceecHH
Confidence 35678889999999875 322222334444 9999999999888864 4699999999988754
No 155
>PLN02561 triosephosphate isomerase
Probab=53.58 E-value=35 Score=31.84 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
.+.++++..++++++.+ +..-....+-|. |||-.-|.=+.+|... -+++|+.||++.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC------CCCCeEEEehHhhHH
Confidence 34678888999988864 332222334444 9999999999988764 469999999999885
No 156
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=53.40 E-value=16 Score=32.78 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=27.2
Q ss_pred HHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHH
Q 021501 159 KNWFLKFPQYRNRSLFITGESYAGHYIPQLADLML 193 (311)
Q Consensus 159 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 193 (311)
.+|++.+|+...+++-|.|-|.||-.+-.+|....
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 35888999998899999999999987777766553
No 157
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=53.05 E-value=14 Score=24.94 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=25.1
Q ss_pred CcccCccccccchhhhhhhcCCCCHHHHHHHHH
Q 021501 211 NPVLEFATDFNSRAEFFWSHGLISDATYTMFTS 243 (311)
Q Consensus 211 ng~~d~~~~~~~~~~~~~~~glI~~~~~~~~~~ 243 (311)
.|.+||.+...-..+-|+..|+|+.+.+..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377888876665667789999999999887764
No 158
>PLN03037 lipase class 3 family protein; Provisional
Probab=52.18 E-value=28 Score=35.82 Aligned_cols=44 Identities=23% Similarity=0.079 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 152 RDNLVFLKNWFLKFPQY-RNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 152 ~~~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
+++.+-+++..+.+++. ....++|+|||.||-.+-..|..|...
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 45566667766666642 234699999999999887777777664
No 159
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=50.73 E-value=8.7 Score=34.39 Aligned_cols=16 Identities=38% Similarity=0.916 Sum_probs=13.8
Q ss_pred CCCCEEEEEcCCCChh
Q 021501 74 ASKPLVLWLNGGPGCS 89 (311)
Q Consensus 74 ~~~PlilWlnGGPG~S 89 (311)
...|-|+|+-|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4578999999999985
No 160
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=50.30 E-value=30 Score=32.49 Aligned_cols=40 Identities=20% Similarity=0.121 Sum_probs=26.7
Q ss_pred CeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 172 SLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 172 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
++.|+|||=||+-+-.+|....+. ....++++++..+|+=
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~---~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASS---SLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhccc---ccccceeEEEEecccc
Confidence 599999999999544444333211 1136788888887753
No 161
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=49.99 E-value=37 Score=32.59 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=33.6
Q ss_pred HHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 160 NWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 160 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.|+...|++-.+.+.++|+|-||...-.+|. +.+ .+++++...|++.
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~--------rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP--------RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS--------T-SEEEEESESSS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc--------cccEEEecCCCcc
Confidence 3667889998889999999999976544443 322 2777888877663
No 162
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=48.11 E-value=17 Score=35.73 Aligned_cols=37 Identities=16% Similarity=0.120 Sum_probs=21.0
Q ss_pred CeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 172 SLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 172 ~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
++-++||||||--+- ..+.+. ..++..++.+||+-|.
T Consensus 229 ~i~~~GHSFGGATa~---~~l~~d------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATAL---QALRQD------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHH---HHHHH-------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHH---HHHhhc------cCcceEEEeCCcccCC
Confidence 589999999995433 223222 2367788888988764
No 163
>PRK07868 acyl-CoA synthetase; Validated
Probab=47.93 E-value=73 Score=35.29 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=26.4
Q ss_pred CCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 170 NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 170 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
..+++++|+|.||..+-.+|.. .. . -.++++++.+.-+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~--~~-~----~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY--RR-S----KDIASIVTFGSPVDT 179 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh--cC-C----CccceEEEEeccccc
Confidence 3579999999999877666543 11 1 136777776655553
No 164
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=47.85 E-value=52 Score=33.76 Aligned_cols=64 Identities=23% Similarity=0.199 Sum_probs=41.3
Q ss_pred cchhhhccccccccccccCC---CCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccc
Q 021501 120 ANMLFLETPIGVGFSYSKDA---SSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHY 184 (311)
Q Consensus 120 anllfiDqPvGtGfSy~~~~---~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 184 (311)
|.|+.+|.. --|-|..... ......+.+++-.|+.+|++.--.+|+.-.+.|++.+|-||.|..
T Consensus 119 A~v~~lEHR-FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsL 185 (514)
T KOG2182|consen 119 ATVFQLEHR-FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSL 185 (514)
T ss_pred CeeEEeeee-ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHH
Confidence 456777765 4555532211 111112456677888999988777887655558999999999854
No 165
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=44.75 E-value=23 Score=30.74 Aligned_cols=39 Identities=10% Similarity=0.012 Sum_probs=26.1
Q ss_pred CCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 170 NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 170 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
..+.+|+|||.|..-+-..+. .+. .-+++|+++.+|.-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~~-----~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQS-----QKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HTC-----CSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hcc-----cccccEEEEEcCCCc
Confidence 467999999999865444433 221 357999999999843
No 166
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=44.66 E-value=74 Score=32.07 Aligned_cols=60 Identities=20% Similarity=0.172 Sum_probs=41.6
Q ss_pred ccchhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccc
Q 021501 119 EANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHY 184 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 184 (311)
.+|.|+|+.. =-|=|...+ .++...+-.+.|.|.....+.|-..+| .++.-+|-|=||+-
T Consensus 88 d~NQl~vEhR-fF~~SrP~p-~DW~~Lti~QAA~D~Hri~~A~K~iY~----~kWISTG~SKGGmT 147 (448)
T PF05576_consen 88 DGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQAASDQHRIVQAFKPIYP----GKWISTGGSKGGMT 147 (448)
T ss_pred ccceEEEEEe-eccCCCCCC-CCcccccHhHhhHHHHHHHHHHHhhcc----CCceecCcCCCcee
Confidence 4688888876 334455443 344444567888898888888765555 36888899999975
No 167
>PRK14565 triosephosphate isomerase; Provisional
Probab=44.58 E-value=50 Score=30.54 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 147 DKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
+.+.+++...+++++. .++-|. |||..-|.-+..+.+. -+++|+.||++.+|+.
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC------CCCCEEEEechhhcHH
Confidence 3456788889998862 122333 9999999999998873 3599999999988765
No 168
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=43.86 E-value=12 Score=33.32 Aligned_cols=37 Identities=19% Similarity=0.022 Sum_probs=26.7
Q ss_pred eEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 173 LFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 173 ~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
..|+|.|+||.-+-.+|.+-.+ -+.+++..+|.+++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd--------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPD--------LFGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTT--------TESEEEEESEESETT
T ss_pred eEEeccCCCcHHHHHHHHhCcc--------ccccccccCcccccc
Confidence 8999999999765555543322 278888888887655
No 169
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=43.66 E-value=76 Score=29.50 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.++++.+|+++++.. +. -....+-|. |||-.-|.=+..+... -+++|+.||++.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC------CCCCEEEEeeeeechH
Confidence 34678888999998863 32 112334343 9999999999888764 4699999999988654
No 170
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.18 E-value=35 Score=32.52 Aligned_cols=36 Identities=22% Similarity=0.330 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeecccc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGH 183 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 183 (311)
.+.++.+.+.+......-|+=..-++|+.|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 356778888888888888887655699999998754
No 171
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=42.87 E-value=27 Score=31.61 Aligned_cols=58 Identities=29% Similarity=0.342 Sum_probs=38.3
Q ss_pred cccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 129 IGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 129 vGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
-|+|-|-+.-.. ..++.++|....+.++. +||.- ..+.+.|-|+|+-.+-.+|++..+
T Consensus 69 RgVG~S~G~fD~---GiGE~~Da~aaldW~~~---~hp~s--~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 69 RGVGRSQGEFDN---GIGELEDAAAALDWLQA---RHPDS--ASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred cccccccCcccC---CcchHHHHHHHHHHHHh---hCCCc--hhhhhcccchHHHHHHHHHHhccc
Confidence 388988764433 24566667666666663 78853 236899999999766666665544
No 172
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=41.83 E-value=80 Score=29.70 Aligned_cols=92 Identities=20% Similarity=0.202 Sum_probs=55.6
Q ss_pred chhhhccccccccccccCC-----CCCcccChHHHHHHHHHHHHHHHHHCCC--C-CCCCeEEEeeeccccchHHHHHHH
Q 021501 121 NMLFLETPIGVGFSYSKDA-----SSYQGVGDKITARDNLVFLKNWFLKFPQ--Y-RNRSLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 121 nllfiDqPvGtGfSy~~~~-----~~~~~~~~~~~a~~~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvP~lA~~i 192 (311)
..++|++-..-||--..++ ..| .+-...+..+++.++.-.+..+. + .+.++.++|.|=||+= ...|.++
T Consensus 15 e~~~l~~~L~~GyaVv~pDY~Glg~~y--~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~A-a~~AA~l 91 (290)
T PF03583_consen 15 EAPFLAAWLARGYAVVAPDYEGLGTPY--LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQA-ALWAAEL 91 (290)
T ss_pred HHHHHHHHHHCCCEEEecCCCCCCCcc--cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHH-HHHHHHH
Confidence 4566666666666543221 122 12345567777777665444432 2 3578999999999963 3444455
Q ss_pred HHhccccceee--eeeeEeeCcccCcc
Q 021501 193 LEFNKKEELFN--LKGIALGNPVLEFA 217 (311)
Q Consensus 193 ~~~n~~~~~in--LkGi~Igng~~d~~ 217 (311)
... -.+.++ |.|.+.|.+..|..
T Consensus 92 ~~~--YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 92 APS--YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHH--hCcccccceeEEeccCCccCHH
Confidence 432 234588 99999999877653
No 173
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=41.23 E-value=32 Score=33.85 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHH
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 192 (311)
+..+.+.+++-++. .++++.|+|||+||.++-.+-...
T Consensus 103 ~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 103 FTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhc
Confidence 33344444444333 268999999999998765554444
No 174
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=39.66 E-value=94 Score=28.72 Aligned_cols=59 Identities=19% Similarity=0.346 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 149 ITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
+.+++...++++++.. +.+ ....+-|. |||-.-|.=+..+.+. -+++|+.+|.+.+|+.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~------~~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ------PDIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC------CCCCEEEeehHhhCHH
Confidence 4578888999998875 333 22334444 9999999988888874 2599999999988743
No 175
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=39.03 E-value=71 Score=24.00 Aligned_cols=77 Identities=22% Similarity=0.184 Sum_probs=42.1
Q ss_pred ceEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCC
Q 021501 60 RALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA 139 (311)
Q Consensus 60 ~~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~ 139 (311)
.+||+.....+.. .+.+|+.++|--..|.- ...+.+ . |..+ -.+|+-+|++ |-|.|-+...
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~---~------L~~~------G~~V~~~D~r-GhG~S~g~rg 62 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE---F------LAEQ------GYAVFAYDHR-GHGRSEGKRG 62 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH---H------HHhC------CCEEEEECCC-cCCCCCCccc
Confidence 3566654444322 68899999987444433 222211 0 2111 1357789988 9999964322
Q ss_pred CCCcccChHHHHHHHHHHH
Q 021501 140 SSYQGVGDKITARDNLVFL 158 (311)
Q Consensus 140 ~~~~~~~~~~~a~~~~~fL 158 (311)
+ ..+-+...+|+..|+
T Consensus 63 --~-~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 63 --H-IDSFDDYVDDLHQFI 78 (79)
T ss_pred --c-cCCHHHHHHHHHHHh
Confidence 2 223345566766665
No 176
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=38.19 E-value=79 Score=30.09 Aligned_cols=90 Identities=20% Similarity=0.334 Sum_probs=48.8
Q ss_pred CCCCCEEEEEcCCCChhhhhhhcccCCCCCcCCCCcccccccCcccccchhhhccccccccccccCC--CCCcccChHHH
Q 021501 73 PASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSKDA--SSYQGVGDKIT 150 (311)
Q Consensus 73 p~~~PlilWlnGGPG~SS~~~g~~~e~GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~--~~~~~~~~~~~ 150 (311)
++..|+|+|=-=|=.|||..++.|.+ +..| -|-..||+-.-.. .+.....-.++
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q----------~l~~--------------~~g~~v~~leig~g~~~s~l~pl~~Q 76 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQ----------LLEE--------------LPGSPVYCLEIGDGIKDSSLMPLWEQ 76 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHH----------HHHh--------------CCCCeeEEEEecCCcchhhhccHHHH
Confidence 44489999977799999854455543 1111 1223333321100 01111233445
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHh
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEF 195 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 195 (311)
+....+.+. .-|+. ++-.+|+|.|-||.. |+.+.+.
T Consensus 77 v~~~ce~v~----~m~~l-sqGynivg~SQGglv----~Raliq~ 112 (296)
T KOG2541|consen 77 VDVACEKVK----QMPEL-SQGYNIVGYSQGGLV----ARALIQF 112 (296)
T ss_pred HHHHHHHHh----cchhc-cCceEEEEEccccHH----HHHHHHh
Confidence 555555554 44555 467999999999965 5555544
No 177
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=36.28 E-value=1.2e+02 Score=30.76 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=22.7
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHH
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQL 188 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 188 (311)
++++++....|.- ..+++-|+|||.||..|-.+
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHH
Confidence 4566665555552 24569999999999877554
No 178
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.19 E-value=1.6e+02 Score=27.39 Aligned_cols=83 Identities=16% Similarity=0.251 Sum_probs=42.1
Q ss_pred ccchhhhcccccccccccc-CCC----CCc--------ccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccch
Q 021501 119 EANMLFLETPIGVGFSYSK-DAS----SYQ--------GVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYI 185 (311)
Q Consensus 119 ~anllfiDqPvGtGfSy~~-~~~----~~~--------~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 185 (311)
-+-+-||.+.+--||.-.. +.+ .|. ..+..+.|...+..+. .| -+...+|++.|||||.-.
T Consensus 131 GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v-----~p-a~~~sv~vvahsyGG~~t 204 (297)
T KOG3967|consen 131 GTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIV-----LP-AKAESVFVVAHSYGGSLT 204 (297)
T ss_pred CCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHh-----cc-cCcceEEEEEeccCChhH
Confidence 3446677777777776421 111 110 1222333444443332 22 234679999999999654
Q ss_pred HHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 186 PQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 186 P~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
..+..+.-+. =.+-.|++-+..
T Consensus 205 ~~l~~~f~~d------~~v~aialTDs~ 226 (297)
T KOG3967|consen 205 LDLVERFPDD------ESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcCCc------cceEEEEeeccc
Confidence 4444333322 124456665544
No 179
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=35.99 E-value=48 Score=32.03 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=33.8
Q ss_pred chhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccc
Q 021501 121 NMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAG 182 (311)
Q Consensus 121 nllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG 182 (311)
.+.-||.- --|.|-... ..+-+..|.|+..||...-. .++..+..|.|||.||
T Consensus 82 ~v~~vd~R-nHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKIT-----VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCcccc-----ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 45556655 667663222 22345567777777775422 2456789999999999
No 180
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=35.20 E-value=39 Score=34.60 Aligned_cols=113 Identities=18% Similarity=0.393 Sum_probs=64.6
Q ss_pred eEEEEEeecCCCCCCCCEEEEEcCCCChhhhhhhccc--CC-CCCcCCCCcccccccCcccccchhhhcccccccccccc
Q 021501 61 ALFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFS--EN-GPFRPNGQVLVRNEYSWNREANMLFLETPIGVGFSYSK 137 (311)
Q Consensus 61 ~lfy~f~e~~~~p~~~PlilWlnGGPG~SS~~~g~~~--e~-GP~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~ 137 (311)
.++|+|-+.. -+-||.+.+.|=-.+-+. .|.++ .+ .|| |||=|+.+--| ++
T Consensus 277 Ei~yYFnPGD---~KPPL~VYFSGyR~aEGF-Egy~MMk~Lg~Pf-------------------LL~~DpRleGG-aF-- 330 (511)
T TIGR03712 277 EFIYYFNPGD---FKPPLNVYFSGYRPAEGF-EGYFMMKRLGAPF-------------------LLIGDPRLEGG-AF-- 330 (511)
T ss_pred eeEEecCCcC---CCCCeEEeeccCcccCcc-hhHHHHHhcCCCe-------------------EEeeccccccc-ee--
Confidence 3666653332 345999999996555555 44443 22 354 66777555444 22
Q ss_pred CCCCCcccChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 138 DASSYQGVGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 138 ~~~~~~~~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
| .+.++--+.+.+.+++-++.- .|+.+++.|.|=|+|..=+-+.+ .+++-++|++|=|.++-
T Consensus 331 ----Y--lGs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYg----------a~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 331 ----Y--LGSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYG----------AKLSPHAIIVGKPLVNL 392 (511)
T ss_pred ----e--eCcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhc----------ccCCCceEEEcCcccch
Confidence 1 111212233444555544432 57788999999999875322222 24677788888887654
No 181
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=34.69 E-value=49 Score=33.01 Aligned_cols=97 Identities=23% Similarity=0.324 Sum_probs=55.2
Q ss_pred EEEEcCCCChhhhhhhcccCCCCCcCCCC-cccccccCcccccchhhhccccccccccccCCCCCcccChHHHHHHHHHH
Q 021501 79 VLWLNGGPGCSSLGVGAFSENGPFRPNGQ-VLVRNEYSWNREANMLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVF 157 (311)
Q Consensus 79 ilWlnGGPG~SS~~~g~~~e~GP~~~~~~-~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~f 157 (311)
+|.++|=||+=-- |...=|..-+++ +-..+.+ ...|+-=--| |-|||-......+ +..++|+-+...
T Consensus 155 lLl~HGwPGsv~E----FykfIPlLT~p~~hg~~~d~----~FEVI~PSlP-GygwSd~~sk~GF---n~~a~ArvmrkL 222 (469)
T KOG2565|consen 155 LLLLHGWPGSVRE----FYKFIPLLTDPKRHGNESDY----AFEVIAPSLP-GYGWSDAPSKTGF---NAAATARVMRKL 222 (469)
T ss_pred eEEecCCCchHHH----HHhhhhhhcCccccCCccce----eEEEeccCCC-CcccCcCCccCCc---cHHHHHHHHHHH
Confidence 5678999998533 222223322221 0111122 2233332224 8999876554443 556666666555
Q ss_pred HHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 158 LKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 158 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
+. |+.-+++||-|--||......+|....+
T Consensus 223 Ml-------RLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 223 ML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred HH-------HhCcceeEeecCchHHHHHHHHHhhcch
Confidence 54 3455789999888998887777766655
No 182
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=33.58 E-value=1.3e+02 Score=28.06 Aligned_cols=59 Identities=19% Similarity=0.241 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeE-eeCc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIA-LGNP 212 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~-Igng 212 (311)
...|+-+...|+.--+ +|.=+.+-++|||+||.-+ ..++.+.......-.|+-++ |+.|
T Consensus 83 ~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSW---TYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHH---HHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHH---HHHHHHhccCCCCcccceEEEeccc
Confidence 3455555555544322 4555689999999999643 45555432221112455544 4443
No 183
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=33.26 E-value=91 Score=30.94 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=34.2
Q ss_pred cChHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeC
Q 021501 145 VGDKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGN 211 (311)
Q Consensus 145 ~~~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Ign 211 (311)
.++..+++.+.+|-.+ .=.|+..++.|.|.|-||.-+.-.|.-. -++|++++-.
T Consensus 289 ~n~~nA~DaVvQfAI~----~Lgf~~edIilygWSIGGF~~~waAs~Y---------PdVkavvLDA 342 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQ----VLGFRQEDIILYGWSIGGFPVAWAASNY---------PDVKAVVLDA 342 (517)
T ss_pred ccchHHHHHHHHHHHH----HcCCCccceEEEEeecCCchHHHHhhcC---------CCceEEEeec
Confidence 4444444444444333 2367788999999999998766665322 4578766643
No 184
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=33.15 E-value=85 Score=33.33 Aligned_cols=61 Identities=16% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.++++..||++++.. +..-....+=|. |||.--|.-+..|... -+++|+.||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC------CCCCeEEeehHhcCHH
Confidence 45788899999999864 322111223233 9999999999999875 3699999999888764
No 185
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=32.73 E-value=42 Score=34.11 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHCCC-CCCCCeEEEeeeccccchHHHHHHH
Q 021501 150 TARDNLVFLKNWFLKFPQ-YRNRSLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 150 ~a~~~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i 192 (311)
..++.+.-|+..++..-. ...+|+.|++||.||.|+=.+-...
T Consensus 160 ~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 160 ERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 344444444444443222 2348999999999999987775444
No 186
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=32.19 E-value=54 Score=29.12 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=25.3
Q ss_pred CCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 170 NRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 170 ~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
.+|.||++||-|+.-+...+..+.. .+.|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh--------ccceEEEecCC
Confidence 5789999999998544444433332 48899988764
No 187
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=31.84 E-value=1.2e+02 Score=26.36 Aligned_cols=64 Identities=9% Similarity=0.139 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeee-eEeeCcccC
Q 021501 147 DKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKG-IALGNPVLE 215 (311)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkG-i~Igng~~d 215 (311)
...-+.++...++++..+-| +.++.|+|-|-|++.+-..+.. ........=++.+ +.+|||.-.
T Consensus 60 ~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~--~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 60 VAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG--DGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH--TTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh--ccCChhhhhhEEEEEEecCCccc
Confidence 34456778889999999988 4689999999999876666555 0000001123566 467887654
No 188
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=29.58 E-value=1.7e+02 Score=28.67 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=30.7
Q ss_pred CCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcc
Q 021501 169 RNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPV 213 (311)
Q Consensus 169 ~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~ 213 (311)
..||+-|+|+|-|+.-+=....+|.+++..+ +--+-+++|.|.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~--lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFG--LVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccC--eEeeEEEecCCC
Confidence 6789999999999998888888888764322 222334556554
No 189
>PRK15492 triosephosphate isomerase; Provisional
Probab=29.09 E-value=1.3e+02 Score=28.20 Aligned_cols=60 Identities=13% Similarity=0.249 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.+++..+++++++.. +.+- ...+-|. |||-.-|.-+..|... -+++|+.||...+|+.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~------~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ------PHIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC------CCCCEEEeehhhcCHH
Confidence 34577888999998653 3322 2334444 9999999999999874 3699999999888764
No 190
>PRK06762 hypothetical protein; Provisional
Probab=28.99 E-value=34 Score=28.72 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.7
Q ss_pred CEEEEEcCCCChh
Q 021501 77 PLVLWLNGGPGCS 89 (311)
Q Consensus 77 PlilWlnGGPG~S 89 (311)
|.++|+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999886
No 191
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=28.92 E-value=45 Score=29.24 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=24.8
Q ss_pred HHHHHHHHCCCCCCCCeEEEeeeccccchHHHH
Q 021501 157 FLKNWFLKFPQYRNRSLFITGESYAGHYIPQLA 189 (311)
Q Consensus 157 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 189 (311)
....|++..|+....++-++|-|+||.++-.+|
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 334566777766677899999999998765554
No 192
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=28.23 E-value=72 Score=30.04 Aligned_cols=56 Identities=18% Similarity=0.207 Sum_probs=30.7
Q ss_pred HHHHHHHHHH----HHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCccc
Q 021501 151 ARDNLVFLKN----WFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVL 214 (311)
Q Consensus 151 a~~~~~fL~~----f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~ 214 (311)
+..+.+||.+ |.+.-=+-...+--|+|||+||..+- ..|+++.+. +.-+.+.+|.+
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl---~aLL~~p~~-----F~~y~~~SPSl 172 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVL---FALLTYPDC-----FGRYGLISPSL 172 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHH---HHHhcCcch-----hceeeeecchh
Confidence 4445555544 55542233445689999999997643 334443221 44455555543
No 193
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.88 E-value=81 Score=32.22 Aligned_cols=36 Identities=19% Similarity=0.355 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeecccc
Q 021501 148 KITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGH 183 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 183 (311)
..+|+.+.++.-.+.++-|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 356888889988888999987766799999998864
No 194
>PTZ00333 triosephosphate isomerase; Provisional
Probab=27.63 E-value=1.4e+02 Score=27.91 Aligned_cols=59 Identities=15% Similarity=0.312 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccC
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLE 215 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d 215 (311)
.+.++++..++++++.. +.......+-|. |||-.-|.-+..|... -+++|+.||.+.++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~------~~vDG~LvG~asl~ 241 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ------PDIDGFLVGGASLK 241 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC------CCCCEEEEehHhhh
Confidence 45678889999998763 322222233333 9999999999998764 46999999998887
No 195
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=27.04 E-value=28 Score=32.25 Aligned_cols=61 Identities=16% Similarity=0.304 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 148 KITARDNLVFLKNWFLK-FPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 148 ~~~a~~~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.+.++.+..++++++.. +.+-..+.+-|. |||..-|.=+..+... -+++|+.||...+++.
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC------CCCCEEEEchhhhccc
Confidence 45688889999998753 211111222232 8888888888888764 4699999999988865
No 196
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=26.51 E-value=68 Score=33.86 Aligned_cols=21 Identities=10% Similarity=0.221 Sum_probs=17.0
Q ss_pred CCCeEEEeeeccccchHHHHH
Q 021501 170 NRSLFITGESYAGHYIPQLAD 190 (311)
Q Consensus 170 ~~~~yi~GESYgG~yvP~lA~ 190 (311)
++++.|+|||+||.++=.+-.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 578999999999987666544
No 197
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=25.88 E-value=79 Score=28.08 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=23.0
Q ss_pred CCCCCCeEEEeeeccccchHHHHHHHHH
Q 021501 167 QYRNRSLFITGESYAGHYIPQLADLMLE 194 (311)
Q Consensus 167 ~~~~~~~yi~GESYgG~yvP~lA~~i~~ 194 (311)
....-|+.|-|+||||.....+|.++..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4556689999999999998888877753
No 198
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=25.00 E-value=38 Score=33.54 Aligned_cols=56 Identities=25% Similarity=0.452 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCC--ChhhhhhhcccCCCCCcCC----C---CcccccccCcccccchhhhccccccc
Q 021501 75 SKPLVLWLNGGP--GCSSLGVGAFSENGPFRPN----G---QVLVRNEYSWNREANMLFLETPIGVG 132 (311)
Q Consensus 75 ~~PlilWlnGGP--G~SS~~~g~~~e~GP~~~~----~---~~l~~n~~sW~~~anllfiDqPvGtG 132 (311)
+.|+=|=+.|-+ |-||+ +..+-..|+=..+ | .+..+.+|.--+..||.++|-| |+|
T Consensus 33 ~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 33 NAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp H--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred cCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 457777777755 55888 7777666664321 1 1356677777889999999999 887
No 199
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=24.49 E-value=1.1e+02 Score=29.44 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHH
Q 021501 147 DKITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLML 193 (311)
Q Consensus 147 ~~~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 193 (311)
....++++...+.+-+.... .+++.|.|||.||.-+..++..+-
T Consensus 106 ~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 34456777888887776654 478999999999998887666655
No 200
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=24.37 E-value=45 Score=28.79 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=11.1
Q ss_pred CCEEEEEcCCCChh
Q 021501 76 KPLVLWLNGGPGCS 89 (311)
Q Consensus 76 ~PlilWlnGGPG~S 89 (311)
+|.+|||.|-||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 58999999988775
No 201
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=24.33 E-value=63 Score=27.05 Aligned_cols=17 Identities=41% Similarity=0.598 Sum_probs=14.9
Q ss_pred CCCCCEEEEEcCCCChh
Q 021501 73 PASKPLVLWLNGGPGCS 89 (311)
Q Consensus 73 p~~~PlilWlnGGPG~S 89 (311)
..++|||+=|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 46789999999999985
No 202
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=23.87 E-value=2.1e+02 Score=26.46 Aligned_cols=58 Identities=14% Similarity=-0.015 Sum_probs=37.6
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 155 LVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 155 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
++.|.+++.++.-|.+ |.|-|-|...+..|+......+.......+|=+++.+|..-+
T Consensus 92 l~yl~~~i~enGPFDG----llGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFDG----LLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred HHHHHHHHHHhCCCcc----ccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 5677777777766654 789999987776666622111111224567778888888765
No 203
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=23.60 E-value=48 Score=21.89 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.1
Q ss_pred CCEEEEEcCCCC
Q 021501 76 KPLVLWLNGGPG 87 (311)
Q Consensus 76 ~PlilWlnGGPG 87 (311)
.--.||+.|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345789999887
No 204
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.09 E-value=1.6e+02 Score=26.77 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHH
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLAD 190 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 190 (311)
+...|+ .....|+.+.|+....++.++|-|+||+.+=.+|.
T Consensus 91 ~~~~d~-~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 91 EVLADI-DAALDYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred HHHHHH-HHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 334444 34446777888777778999999999987555553
No 205
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=23.03 E-value=1.5e+02 Score=19.46 Aligned_cols=27 Identities=11% Similarity=0.361 Sum_probs=11.5
Q ss_pred eEEEEEeecCCCCCCCCEEEEEcCCCC
Q 021501 61 ALFYYFAEAETDPASKPLVLWLNGGPG 87 (311)
Q Consensus 61 ~lfy~f~e~~~~p~~~PlilWlnGGPG 87 (311)
+-+|||..+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 455666343332222233444444553
No 206
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=22.20 E-value=1.4e+02 Score=26.47 Aligned_cols=63 Identities=11% Similarity=-0.019 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCcc
Q 021501 151 ARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEFA 217 (311)
Q Consensus 151 a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~~ 217 (311)
.++.++.|.++.++..-| .=|.|-|-|+..+..++..............+|-+++.+|+.-+.
T Consensus 86 ~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~ 148 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPD 148 (212)
T ss_dssp -HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EE
T ss_pred HHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCc
Confidence 455566777777664433 348899999988887776666543211245678888888876543
No 207
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=22.14 E-value=2.1e+02 Score=25.80 Aligned_cols=54 Identities=7% Similarity=-0.010 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeeeccccchHHHHHHHHHhccccceeeeeeeEeeCcccCc
Q 021501 149 ITARDNLVFLKNWFLKFPQYRNRSLFITGESYAGHYIPQLADLMLEFNKKEELFNLKGIALGNPVLEF 216 (311)
Q Consensus 149 ~~a~~~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~n~~~~~inLkGi~Igng~~d~ 216 (311)
+.++++..+++ + . .+.. ..+-|. |||-.-|.=+.++... -+++|+.+|++.+++
T Consensus 151 ~~~~~v~~~ir-~-~--~~~~-~~~~Il---YGGSV~~~N~~~l~~~------~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-A-V--KEVN-ESVRVL---CGAGISTGEDAELAAQ------LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-h-h--hhhc-CCceEE---EeCCCCHHHHHHHhcC------CCCCEEEEeeeeecC
Confidence 45677777887 2 1 1111 223333 9999999999888764 469999999998765
No 208
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=20.71 E-value=58 Score=28.49 Aligned_cols=17 Identities=35% Similarity=0.837 Sum_probs=11.9
Q ss_pred CCCCCEEEEEcCCCChh
Q 021501 73 PASKPLVLWLNGGPGCS 89 (311)
Q Consensus 73 p~~~PlilWlnGGPG~S 89 (311)
+...|+++.+-|+|||-
T Consensus 11 ~~~~P~~~i~aG~~GsG 27 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSG 27 (199)
T ss_dssp --SS-EEEEEES-TTST
T ss_pred cccCCEEEEEeCCCCCC
Confidence 56889999999999985
No 209
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=20.46 E-value=90 Score=27.89 Aligned_cols=41 Identities=20% Similarity=0.370 Sum_probs=30.1
Q ss_pred hhhhccccccccccccCCCCCcccChHHHHHHHHHHHHHHHHHCC
Q 021501 122 MLFLETPIGVGFSYSKDASSYQGVGDKITARDNLVFLKNWFLKFP 166 (311)
Q Consensus 122 llfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fL~~f~~~fp 166 (311)
.|+++ ..+|||++.+.+.+ .++...++++...|.+|+..++
T Consensus 125 ~v~L~--f~tG~siPLTqsa~--~G~~~dve~IA~~I~~FL~l~~ 165 (187)
T PF15169_consen 125 LVVLR--FATGFSIPLTQSAT--LGDRSDVEAIAKLINKFLELNP 165 (187)
T ss_pred EEEEE--ccCCcceeccceEE--ecCchHHHHHHHHHHHHHhhcc
Confidence 44454 46699998766543 3566778889999999998876
No 210
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.01 E-value=97 Score=29.57 Aligned_cols=22 Identities=27% Similarity=0.185 Sum_probs=18.5
Q ss_pred CCeEEEeeeccccchHHHHHHH
Q 021501 171 RSLFITGESYAGHYIPQLADLM 192 (311)
Q Consensus 171 ~~~yi~GESYgG~yvP~lA~~i 192 (311)
.++-++|||-||+-+=.+|...
T Consensus 120 ~klal~GHSrGGktAFAlALg~ 141 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGY 141 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcc
Confidence 4699999999999888887655
Done!